Query 035484
Match_columns 178
No_of_seqs 129 out of 1213
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 04:44:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035484.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035484hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 7.3E-43 2.5E-47 308.3 19.7 168 8-177 1-178 (552)
2 3sqr_A Laccase; multicopper ox 100.0 2.7E-42 9.3E-47 305.6 21.2 163 7-176 64-235 (580)
3 1zpu_A Iron transport multicop 100.0 4.4E-42 1.5E-46 302.4 19.8 165 9-177 1-178 (534)
4 3t6v_A Laccase; beta barrel, o 100.0 6.8E-42 2.3E-46 298.7 18.9 163 11-175 5-177 (495)
5 1v10_A Laccase; multicopper bl 100.0 7.6E-42 2.6E-46 300.1 16.9 169 6-176 19-201 (521)
6 3pxl_A Laccase; 4-copper prote 100.0 2.3E-41 8E-46 295.5 18.7 163 11-175 4-175 (499)
7 3g5w_A Multicopper oxidase typ 100.0 8.1E-41 2.8E-45 277.6 19.5 167 9-177 1-175 (318)
8 2q9o_A Laccase-1; multicopper 100.0 5.1E-40 1.7E-44 290.6 20.5 165 6-177 29-206 (559)
9 1hfu_A Laccase 1; oxidoreducta 100.0 5.5E-40 1.9E-44 287.2 17.0 161 11-176 5-175 (503)
10 2zwn_A Two-domain type laccase 100.0 1.5E-38 5.3E-43 265.8 20.6 167 9-177 2-176 (339)
11 2uxt_A Protein SUFI, SUFI; oxi 100.0 6.4E-40 2.2E-44 283.4 12.5 163 9-177 17-193 (451)
12 3od3_A Blue copper oxidase CUE 100.0 1.3E-38 4.5E-43 277.2 16.8 165 8-178 15-195 (488)
13 3zx1_A Oxidoreductase, putativ 100.0 2.8E-38 9.5E-43 274.9 17.3 164 5-177 45-222 (481)
14 3gdc_A Multicopper oxidase; be 100.0 1.1E-37 3.9E-42 255.3 19.8 155 7-177 31-191 (288)
15 3abg_A Bilirubin oxidase; clea 100.0 4.1E-37 1.4E-41 270.7 13.8 164 9-178 35-213 (534)
16 2wsd_A Spore coat protein A; o 100.0 2.2E-36 7.7E-41 264.9 16.9 167 9-178 24-242 (513)
17 2xu9_A Laccase; oxidoreductase 100.0 3E-36 1E-40 259.5 15.5 164 6-177 12-188 (439)
18 3gyr_A PHS, phenoxazinone synt 100.0 3.3E-36 1.1E-40 267.5 14.6 165 7-178 29-266 (612)
19 3aw5_A Multicopper oxidase; be 100.0 2.7E-36 9.1E-41 260.6 10.0 139 33-177 28-180 (448)
20 2g23_A PHS, phenoxazinone synt 100.0 3.2E-35 1.1E-39 261.7 15.7 164 8-178 30-266 (612)
21 3kw8_A Laccase, putative coppe 100.0 1.1E-34 3.8E-39 236.3 13.6 135 6-150 3-157 (276)
22 1mzy_A Copper-containing nitri 100.0 2.2E-33 7.5E-38 233.8 18.4 166 6-178 28-221 (333)
23 1kbv_A ANIA, major outer membr 100.0 3.8E-33 1.3E-37 232.1 19.4 161 6-178 34-210 (327)
24 3t9w_A Small laccase, multi-co 100.0 2E-33 6.8E-38 231.4 14.1 139 2-150 21-179 (299)
25 1oe1_A Dissimilatory copper-co 100.0 1.1E-32 3.9E-37 229.6 18.6 162 7-177 29-220 (336)
26 2bw4_A Copper-containing nitri 100.0 5.5E-32 1.9E-36 225.8 19.5 165 6-177 34-226 (340)
27 2zoo_A Probable nitrite reduct 100.0 5.7E-32 1.9E-36 232.7 18.6 160 6-177 24-199 (442)
28 3tas_A Small laccase, multi-co 100.0 2.3E-32 8E-37 226.2 14.7 135 6-151 9-164 (313)
29 3cg8_A Laccase; oxidoreductase 100.0 1.8E-29 6.2E-34 211.3 15.8 135 6-150 44-198 (343)
30 1sdd_A Coagulation factor V; c 100.0 1.2E-29 4.1E-34 209.3 11.2 136 33-176 52-211 (306)
31 2j5w_A Ceruloplasmin, ferroxid 100.0 1.4E-28 4.7E-33 230.7 16.9 143 5-148 16-221 (1065)
32 1sdd_B Coagulation factor V; c 100.0 7.9E-28 2.7E-32 215.7 18.1 168 6-176 2-236 (647)
33 2r7e_A Coagulation factor VIII 99.9 5.7E-28 2E-32 219.4 8.7 128 14-148 50-200 (742)
34 2r7e_B Coagulation factor VIII 99.9 1E-27 3.5E-32 218.3 8.8 142 5-148 128-318 (770)
35 2dv6_A Nitrite reductase; elec 99.9 1.6E-25 5.4E-30 192.6 18.5 159 8-178 161-335 (447)
36 2r7e_A Coagulation factor VIII 99.9 1.4E-25 4.7E-30 203.8 5.8 110 38-148 448-577 (742)
37 2j5w_A Ceruloplasmin, ferroxid 99.8 5.1E-20 1.7E-24 172.9 8.5 116 27-148 616-736 (1065)
38 2dv6_A Nitrite reductase; elec 99.8 1.2E-19 3.9E-24 156.0 10.1 108 8-132 26-134 (447)
39 3kw8_A Laccase, putative coppe 99.8 8.4E-19 2.9E-23 142.4 11.6 97 33-131 157-266 (276)
40 3cvb_A Plastocyanin; cupredoxi 99.7 2.2E-18 7.4E-23 120.1 4.3 88 38-130 15-105 (105)
41 3cg8_A Laccase; oxidoreductase 99.7 4.2E-16 1.4E-20 130.2 11.2 98 33-132 198-308 (343)
42 1iby_A Nitrosocyanin; RED copp 99.6 3.4E-15 1.2E-19 105.4 10.5 106 11-130 2-112 (112)
43 3zx1_A Oxidoreductase, putativ 99.6 6.7E-15 2.3E-19 127.9 8.9 96 33-130 373-481 (481)
44 2cal_A Rusticyanin; iron respi 99.6 1.6E-14 5.4E-19 107.9 9.0 91 33-129 53-154 (154)
45 3t9w_A Small laccase, multi-co 99.5 1.1E-13 3.9E-18 113.4 11.9 99 33-132 179-289 (299)
46 3gdc_A Multicopper oxidase; be 99.5 7.8E-14 2.7E-18 113.7 10.5 117 9-130 161-288 (288)
47 1fwx_A Nitrous oxide reductase 99.5 7.3E-14 2.5E-18 123.6 10.6 90 27-131 499-593 (595)
48 2g23_A PHS, phenoxazinone synt 99.5 1.2E-13 4.2E-18 123.0 10.5 103 28-131 457-592 (612)
49 3tas_A Small laccase, multi-co 99.5 3.3E-13 1.1E-17 111.2 12.3 99 33-132 163-273 (313)
50 1sdd_B Coagulation factor V; c 99.4 5.9E-13 2E-17 119.3 10.4 99 29-131 226-328 (647)
51 2xu9_A Laccase; oxidoreductase 99.4 1.2E-12 4.2E-17 112.3 10.7 95 31-128 335-438 (439)
52 2wsd_A Spore coat protein A; o 99.4 1.4E-12 4.7E-17 114.1 10.4 101 30-131 384-511 (513)
53 1sdd_A Coagulation factor V; c 99.4 1.4E-14 4.9E-19 119.0 -2.3 96 29-131 201-301 (306)
54 2ov0_A Amicyanin; beta-sandwic 99.4 1.8E-12 6.1E-17 90.5 8.5 78 37-129 28-105 (105)
55 3od3_A Blue copper oxidase CUE 99.4 1.1E-12 3.7E-17 114.2 8.5 94 33-128 380-488 (488)
56 3g5w_A Multicopper oxidase typ 99.3 3.9E-12 1.3E-16 105.1 10.0 99 30-131 165-277 (318)
57 2gim_A Plastocyanin; beta shee 99.3 3.5E-12 1.2E-16 88.7 8.3 83 41-130 19-106 (106)
58 2aan_A Auracyanin A; cupredoxi 99.3 6.1E-12 2.1E-16 91.9 9.8 91 38-129 31-139 (139)
59 1hfu_A Laccase 1; oxidoreducta 99.3 7E-12 2.4E-16 109.4 11.1 88 42-131 373-471 (503)
60 3gyr_A PHS, phenoxazinone synt 99.3 3.8E-12 1.3E-16 112.8 9.0 101 29-131 458-592 (612)
61 1v10_A Laccase; multicopper bl 99.3 5.8E-12 2E-16 110.4 9.5 86 42-131 397-492 (521)
62 3abg_A Bilirubin oxidase; clea 99.3 5.7E-12 1.9E-16 110.8 8.8 100 33-132 361-477 (534)
63 1zpu_A Iron transport multicop 99.3 2.8E-11 9.5E-16 106.3 13.2 89 42-131 370-482 (534)
64 3t6v_A Laccase; beta barrel, o 99.2 1.8E-11 6.3E-16 106.6 9.5 89 41-131 373-472 (495)
65 3pxl_A Laccase; 4-copper prote 99.2 3.2E-11 1.1E-15 105.2 9.9 89 41-131 369-472 (499)
66 2zwn_A Two-domain type laccase 99.2 5.2E-11 1.8E-15 99.0 10.1 100 29-131 165-278 (339)
67 1aoz_A Ascorbate oxidase; oxid 99.2 1.3E-10 4.5E-15 102.3 12.8 88 43-131 418-526 (552)
68 1kbv_A ANIA, major outer membr 99.2 6.7E-11 2.3E-15 97.9 10.0 99 30-131 199-308 (327)
69 3aw5_A Multicopper oxidase; be 99.2 9.8E-11 3.3E-15 100.8 9.9 93 33-129 326-448 (448)
70 2bw4_A Copper-containing nitri 99.2 2.7E-10 9.3E-15 94.5 12.1 98 30-131 216-325 (340)
71 4hci_A Cupredoxin 1; structura 99.2 9E-11 3.1E-15 81.0 7.3 77 37-129 23-100 (100)
72 2plt_A Plastocyanin; electron 99.1 7.5E-11 2.5E-15 80.7 6.6 80 41-129 17-98 (98)
73 2uxt_A Protein SUFI, SUFI; oxi 99.1 5.6E-11 1.9E-15 102.4 6.8 93 33-131 335-442 (451)
74 1qhq_A Protein (auracyanin); e 99.1 3.8E-10 1.3E-14 82.3 10.1 91 39-130 30-140 (140)
75 1mzy_A Copper-containing nitri 99.1 6.3E-10 2.1E-14 92.1 12.3 96 30-131 210-319 (333)
76 2r7e_B Coagulation factor VIII 99.1 1.5E-11 5.1E-16 112.2 1.3 97 30-130 355-456 (770)
77 1pcs_A Plastocyanin; electron 99.1 4.7E-10 1.6E-14 76.7 7.8 80 41-129 18-98 (98)
78 2q9o_A Laccase-1; multicopper 99.0 5.3E-10 1.8E-14 98.7 9.3 88 43-131 405-522 (559)
79 1bxv_A Plastocyanin; copper pr 99.0 8.9E-10 3E-14 74.1 7.5 73 41-129 18-91 (91)
80 1b3i_A PETE protein, protein ( 99.0 1.3E-09 4.6E-14 74.3 7.9 76 42-129 19-97 (97)
81 1byp_A Protein (plastocyanin); 99.0 2.8E-09 9.6E-14 72.9 9.2 76 42-129 17-99 (99)
82 1oe1_A Dissimilatory copper-co 99.0 4.8E-09 1.7E-13 86.8 11.8 98 30-131 210-319 (336)
83 2zoo_A Probable nitrite reduct 99.0 3E-09 1E-13 91.0 10.3 100 30-132 189-299 (442)
84 1plc_A Plastocyanin; electron 99.0 4.6E-09 1.6E-13 71.9 9.2 79 41-129 16-99 (99)
85 1kdj_A Plastocyanin; electron 98.9 2E-09 7E-14 74.0 7.0 82 41-129 16-102 (102)
86 3erx_A Pseudoazurin; copper pr 98.9 1.2E-08 4.1E-13 73.1 10.8 75 41-131 20-95 (123)
87 3tu6_A Pseudoazurin (blue copp 98.9 1.4E-08 4.7E-13 73.2 9.8 75 41-131 22-97 (127)
88 3ef4_A Pseudoazurin, blue copp 98.8 7.6E-09 2.6E-13 74.3 7.2 75 41-131 21-96 (124)
89 1cuo_A Protein (azurin ISO-2); 98.8 4.3E-08 1.5E-12 70.8 10.6 92 39-130 15-129 (129)
90 3sqr_A Laccase; multicopper ox 98.8 6.4E-09 2.2E-13 92.2 7.3 84 47-131 444-545 (580)
91 3ay2_A Lipid modified azurin p 98.8 4.5E-08 1.6E-12 73.6 9.9 97 33-130 47-167 (167)
92 3c75_A Amicyanin; copper prote 98.7 5.1E-08 1.8E-12 70.5 8.5 77 38-129 56-132 (132)
93 2ccw_A Azurin II, AZN-2; elect 98.7 3.2E-07 1.1E-11 66.2 10.9 91 39-130 15-129 (129)
94 1iuz_A Plastocyanin; electron 98.6 5.8E-08 2E-12 66.3 6.5 77 41-129 17-98 (98)
95 1paz_A Pseudoazurin precursor; 98.6 1.5E-07 5.3E-12 67.3 7.7 75 41-131 20-95 (123)
96 2iaa_C Azurin; quinoprotein, t 98.6 4.9E-07 1.7E-11 65.1 10.3 91 39-130 14-128 (128)
97 1nwp_A Azurin; electron transp 98.6 7.5E-07 2.6E-11 64.1 11.3 90 39-129 15-128 (128)
98 1id2_A Amicyanin; beta barrel, 98.6 2.4E-07 8.1E-12 64.4 7.9 77 38-129 30-106 (106)
99 1pmy_A Pseudoazurin; electron 98.6 1.6E-07 5.5E-12 67.2 7.0 75 41-131 20-95 (123)
100 3sbq_A Nitrous-oxide reductase 98.5 5.8E-07 2E-11 79.1 11.6 85 33-131 549-638 (638)
101 2ux6_A Pseudoazurin; type-1 co 98.3 1.2E-06 4E-11 62.6 6.9 74 41-131 20-93 (122)
102 3fsa_A Azurin; copper, cupredo 97.9 0.00012 4E-09 52.3 10.2 88 39-129 15-125 (125)
103 2cua_A Protein (CUA); CUA cent 97.7 0.00019 6.3E-09 51.9 7.7 74 42-130 60-135 (135)
104 3s8f_B Cytochrome C oxidase su 97.6 0.0004 1.4E-08 52.0 9.3 74 42-130 93-168 (168)
105 1cyx_A CYOA; electron transpor 87.6 1.4 4.8E-05 33.7 6.3 73 42-129 41-115 (205)
106 3hb3_B Cytochrome C oxidase su 84.6 3 0.0001 33.7 7.1 75 42-131 189-265 (298)
107 2gsm_B Cytochrome C oxidase su 83.2 3.8 0.00013 32.4 7.1 75 42-131 171-247 (262)
108 1v54_B Cytochrome C oxidase po 76.2 4.9 0.00017 31.0 5.5 75 42-131 140-216 (227)
109 1xwv_A DER F II; beta sheets, 74.7 6.8 0.00023 27.2 5.5 69 33-102 16-92 (129)
110 1nep_A EPV20, BNPC2, epididyma 74.1 6.1 0.00021 27.5 5.2 69 33-102 18-94 (130)
111 3rfr_A PMOB; membrane, oxidore 72.8 9.7 0.00033 31.9 6.7 14 89-102 353-366 (419)
112 2xzz_A Protein-glutamine gamma 65.4 8.3 0.00028 25.8 4.1 53 50-108 22-78 (102)
113 1yew_A Particulate methane mon 63.9 13 0.00043 30.9 5.6 16 87-102 319-334 (382)
114 3isy_A Bsupi, intracellular pr 63.1 34 0.0012 23.6 10.6 69 36-115 28-101 (120)
115 1jer_A Cucumber stellacyanin; 58.5 12 0.0004 26.6 4.0 33 99-131 76-109 (138)
116 2f1e_A Protein APAG; APAG prot 55.8 17 0.00058 25.4 4.5 46 53-99 34-85 (127)
117 1xvs_A Protein APAG; MCSG APC2 53.4 16 0.00055 25.5 4.0 46 53-99 33-84 (126)
118 1xq4_A Protein APAG; all beta 47.1 25 0.00085 25.0 4.2 46 53-99 38-89 (139)
119 1yew_A Particulate methane mon 45.6 14 0.00047 30.7 2.9 58 33-99 71-128 (382)
120 1tza_A APAG protein, SOR45; st 43.9 22 0.00075 25.1 3.5 46 53-99 33-84 (134)
121 1fft_B Ubiquinol oxidase; elec 43.7 21 0.00071 28.9 3.7 73 42-129 151-225 (315)
122 2wtp_A ORF131 protein, CZCE; m 40.0 13 0.00045 26.2 1.7 17 43-59 72-88 (131)
123 2hj1_A Hypothetical protein; s 38.5 11 0.00038 25.1 1.1 25 30-55 59-83 (97)
124 1x9u_A Umecyanin; cupredoxin, 38.3 25 0.00087 24.0 3.0 32 99-131 73-106 (116)
125 3rpf_C Molybdopterin convertin 34.9 17 0.00058 22.3 1.6 24 30-54 43-67 (74)
126 3rfr_A PMOB; membrane, oxidore 34.1 26 0.00088 29.4 2.9 43 78-120 100-143 (419)
127 4ubp_B Protein (urease (chain 30.8 1.2E+02 0.004 21.1 5.4 64 43-108 18-93 (126)
128 4ac7_B Urease subunit beta; hy 30.8 1.2E+02 0.004 21.1 5.4 64 43-108 18-93 (126)
129 1ws8_A Mavicyanin; oxidized fo 27.1 46 0.0016 22.3 2.8 32 99-131 73-105 (109)
130 2e6j_A Hydin protein; PAPD, st 26.1 38 0.0013 22.0 2.2 56 50-109 28-86 (112)
131 2q5w_D Molybdopterin convertin 25.8 37 0.0013 20.6 2.0 23 31-54 48-70 (77)
132 1vjj_A Protein-glutamine gluta 25.2 1E+02 0.0035 27.7 5.3 55 51-110 611-669 (692)
133 2vpv_A Protein MIF2, MIF2P; nu 24.5 1.6E+02 0.0054 21.2 5.5 28 41-68 127-160 (166)
134 2wnv_C C1Q chain C, complement 24.5 56 0.0019 22.4 2.9 16 42-57 93-108 (131)
135 2wnv_A C1Q chain A, complement 24.5 60 0.0021 22.2 3.1 17 42-58 94-110 (134)
136 2h7w_A Chagasin; beta-strands, 24.5 1.8E+02 0.0061 20.1 7.4 22 40-61 31-52 (131)
137 4ep8_B Urease subunit beta; al 24.1 1.6E+02 0.0056 19.5 5.5 64 43-108 12-87 (101)
138 4ajy_V VON hippel-lindau disea 23.4 1E+02 0.0036 22.3 4.2 44 47-99 17-60 (163)
139 2wnv_B C1Q chain B, complement 23.0 62 0.0021 22.3 2.9 17 42-58 95-111 (136)
140 3kmh_A D-lyxose isomerase; cup 22.9 1.1E+02 0.0037 23.8 4.4 49 42-97 129-183 (246)
141 2yev_B Cytochrome C oxidase su 27.8 19 0.00064 29.2 0.0 73 42-129 141-215 (337)
142 2q3z_A Transglutaminase 2; tra 22.0 1.4E+02 0.0049 26.7 5.6 56 51-111 604-664 (687)
143 1fm0_D Molybdopterin convertin 21.1 42 0.0014 20.5 1.6 22 33-54 53-74 (81)
144 1ryj_A Unknown; beta/alpha pro 20.8 39 0.0013 20.5 1.3 25 30-55 40-64 (70)
145 2ys4_A Hydrocephalus-inducing 20.8 1.8E+02 0.0062 19.1 5.0 57 44-108 37-95 (122)
146 2kut_A Uncharacterized protein 20.1 2.2E+02 0.0074 19.5 6.0 54 47-102 13-73 (122)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=7.3e-43 Score=308.32 Aligned_cols=168 Identities=29% Similarity=0.561 Sum_probs=144.8
Q ss_pred CceEEEEEEEEEEEEEecCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCC-CCcceeecCccccCCCCCCCCCCcc
Q 035484 8 QTIKSFLFNVEWKTVSRLCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVA-QNTTIRWHGIRQLRTGWSDGPAYIT 86 (178)
Q Consensus 8 ~~~~~~~l~i~~~~~~~~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~-~~~~~H~HG~~~~~~~~~DG~~~~~ 86 (178)
.++++|+|+|++..+.++|..+.+ |+|||++|||+|++++||+|+|+|+|.++ +++++||||+.++.++|+||+++++
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~-~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vt 79 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIV-MGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASIS 79 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEE-EEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEEEEcCCCceEEE-EEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccc
Confidence 367999999999999999999999 99999999999999999999999999998 9999999999999989999999999
Q ss_pred ccccCCCCeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEcCCCCCCCCCCCceEEEEE-chhhh-----hhhccc
Q 035484 87 QCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPRMPYPFSAPIQAEIPIIF-DVNAV-----ENDMKY 159 (178)
Q Consensus 87 ~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~d~e~~l~l-d~~~~-----~~~~~~ 159 (178)
||+|+||++++|+|++ +++||||||||...|+. ||+|+|||++++....+.++|+|++|+| ||+.. +..+..
T Consensus 80 q~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 80 QCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp BCCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSCCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred cCCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCCCCccceEEeecccCCCHHHHHhhhhc
Confidence 9999999999999998 89999999999988886 9999999999843333335668999999 87532 222222
Q ss_pred C--CCCCCCceEEECCCCCC
Q 035484 160 G--GGPDSSDACTINGLPGP 177 (178)
Q Consensus 160 ~--~~~~~~~~~liNG~~~p 177 (178)
. .....++.+||||+..+
T Consensus 159 ~~~~~~~~~~~~liNG~~~~ 178 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQF 178 (552)
T ss_dssp SSCCCCCSCSEEEETTBCCS
T ss_pred ccccCCCCCCeEEECCcccc
Confidence 1 11135799999999865
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=2.7e-42 Score=305.63 Aligned_cols=163 Identities=33% Similarity=0.531 Sum_probs=144.0
Q ss_pred CCceEEEEEEEEEEEEEecCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCC-CCcceeecCccccCCCCCCCCCCc
Q 035484 7 SQTIKSFLFNVEWKTVSRLCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVA-QNTTIRWHGIRQLRTGWSDGPAYI 85 (178)
Q Consensus 7 ~~~~~~~~l~i~~~~~~~~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~-~~~~~H~HG~~~~~~~~~DG~~~~ 85 (178)
.+++++|+|+++++.+.++|..+.+ |+|||++|||+|++++||+|+|+|+|.++ ++++|||||+.++.++|+||++++
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~-~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~v 142 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSA-MTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGV 142 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEE-EEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEE-EEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcc
Confidence 6889999999999999999999999 99999999999999999999999999998 899999999999988899999999
Q ss_pred cccccCCCCeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEcCCCCCCCCCCCceE-EEEE-chhh-----hhhhc
Q 035484 86 TQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPRMPYPFSAPIQAEI-PIIF-DVNA-----VENDM 157 (178)
Q Consensus 86 ~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~d~e~-~l~l-d~~~-----~~~~~ 157 (178)
+||+|+||++++|+|++ .++||||||||...|+. ||+|+|||+++.. ..||+|+ +|+| ||+. ++...
T Consensus 143 Tq~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~----~~yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 143 TQCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPAT----ADYDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp TBCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred ccCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCccc----CCCCccceEEEEEEEecCCHHHHHHHH
Confidence 99999999999999998 79999999999998887 9999999998743 2467887 7888 8754 22222
Q ss_pred ccCCCCCCCceEEECCCCC
Q 035484 158 KYGGGPDSSDACTINGLPG 176 (178)
Q Consensus 158 ~~~~~~~~~~~~liNG~~~ 176 (178)
..+ .++.+|.+||||+..
T Consensus 218 ~~~-~~~~~d~~liNG~~~ 235 (580)
T 3sqr_A 218 RLG-APPALENTLMNGTNT 235 (580)
T ss_dssp TTS-CCCCBSEEEETTBCC
T ss_pred hcc-CCCCCceEEECCccc
Confidence 222 245899999999965
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-42 Score=302.39 Aligned_cols=165 Identities=27% Similarity=0.467 Sum_probs=144.0
Q ss_pred ceEEEEEEEEEEEEEecC-ceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCC-CCcceeecCccccCCCCCCCCCCcc
Q 035484 9 TIKSFLFNVEWKTVSRLC-NTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVA-QNTTIRWHGIRQLRTGWSDGPAYIT 86 (178)
Q Consensus 9 ~~~~~~l~i~~~~~~~~g-~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~-~~~~~H~HG~~~~~~~~~DG~~~~~ 86 (178)
++++|+|++++..+.++| ..+.+ |+|||++|||+|++++||+|+|+|+|.++ +++++||||+.++.++|+||+++++
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~-~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vt 79 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPV-ITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLT 79 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEE-EEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTT
T ss_pred CEEEEEEEEEEEEecCCCCceEEE-EEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccc
Confidence 478999999999999999 78998 99999999999999999999999999999 9999999999998888999999999
Q ss_pred ccccCCCCeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEcCCCCCCCCCCCceEEEEE-chhh-----hhhh-cc
Q 035484 87 QCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPRMPYPFSAPIQAEIPIIF-DVNA-----VEND-MK 158 (178)
Q Consensus 87 ~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~d~e~~l~l-d~~~-----~~~~-~~ 158 (178)
||+|+||++++|+|++.+++||||||||...|+. ||+|+|||++++ .|+ .+|+|++|+| ||+. +... +.
T Consensus 80 q~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~-~p~--~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 80 QCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDS-FPY--DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTT-CCS--CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred cCCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCC-CCC--CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 9999999999999998669999999999998886 999999999983 233 5678999999 8753 2222 11
Q ss_pred ---cCCCCCCCceEEECCCCCC
Q 035484 159 ---YGGGPDSSDACTINGLPGP 177 (178)
Q Consensus 159 ---~~~~~~~~~~~liNG~~~p 177 (178)
.....+.++.+||||+.+|
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~~ 178 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMNL 178 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSSC
T ss_pred cccCCCCCCCCceEEECCCCce
Confidence 1223457999999999876
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=6.8e-42 Score=298.72 Aligned_cols=163 Identities=31% Similarity=0.504 Sum_probs=139.7
Q ss_pred EEEEEEEEEEEEEecCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCC-----CcceeecCccccCCCCCCCCCCc
Q 035484 11 KSFLFNVEWKTVSRLCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQ-----NTTIRWHGIRQLRTGWSDGPAYI 85 (178)
Q Consensus 11 ~~~~l~i~~~~~~~~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~-----~~~~H~HG~~~~~~~~~DG~~~~ 85 (178)
..|+|+|++..+.++|..+.+ |+|||++|||+|++++||+|+|+|+|.+++ ++++||||+.++.++|+||++++
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~-~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 83 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPA-VNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFI 83 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEE-EEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred CeEEEEEEEEEEcCCCceEEE-EEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 579999999999999999999 999999999999999999999999999985 79999999999888899999999
Q ss_pred cccccCCCCeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEcC-CCCC--CCCCCCceEEEEE-chhhhhhhcccC
Q 035484 86 TQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPR-MPYP--FSAPIQAEIPIIF-DVNAVENDMKYG 160 (178)
Q Consensus 86 ~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~-~~~~--~~~~~d~e~~l~l-d~~~~~~~~~~~ 160 (178)
+||+|+||++++|+|++.+++||||||||...|+. ||+|+|||+++ ++.. ++. +++|++|+| ||+........+
T Consensus 84 tq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~-d~~e~~l~l~Dw~~~~~~~~~~ 162 (495)
T 3t6v_A 84 TQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDV-DDDTTIITLADWYHVLAKEMGA 162 (495)
T ss_dssp TBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSB-CSGGGEEEEEEECSSCGGGSCS
T ss_pred ccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCC-CCceeEEEEecccCCchhhhcc
Confidence 99999999999999998789999999999998886 99999999987 3322 222 235778888 987633321123
Q ss_pred CCCCCCceEEECCCC
Q 035484 161 GGPDSSDACTINGLP 175 (178)
Q Consensus 161 ~~~~~~~~~liNG~~ 175 (178)
..+..+|++||||+.
T Consensus 163 ~~p~~~d~~liNG~g 177 (495)
T 3t6v_A 163 GGAITADSTLIDGLG 177 (495)
T ss_dssp SSCCCCSEEEETTBC
T ss_pred CCCCCCcEEEECCcC
Confidence 334588999999984
No 5
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=7.6e-42 Score=300.08 Aligned_cols=169 Identities=28% Similarity=0.418 Sum_probs=141.5
Q ss_pred cCCceEEEEEEEEEEEEEecCc-eeEEEEEEcCccCCceEEEecCCEEEEEEEeCCC-----CCcceeecCccccCCCCC
Q 035484 6 SSQTIKSFLFNVEWKTVSRLCN-TKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVA-----QNTTIRWHGIRQLRTGWS 79 (178)
Q Consensus 6 ~~~~~~~~~l~i~~~~~~~~g~-~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~-----~~~~~H~HG~~~~~~~~~ 79 (178)
..+..++|+|++++..+.++|. .+.+ |+|||++|||+|++++||+|+|+|+|.++ +++++||||+.+...+|+
T Consensus 19 ~~~~~~~~~l~i~~~~~~~dg~~~~~~-~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~ 97 (521)
T 1v10_A 19 SLAATVALDLHILNANLDPDGTGARSA-VTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEM 97 (521)
T ss_dssp ---CCSEEEEEEEEEEECTTSSCCEEE-EEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGG
T ss_pred hcccCceEEEEEEEEEEcCCCcceEEE-EEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCcc
Confidence 3456788999999999999999 8998 99999999999999999999999999999 999999999999877899
Q ss_pred CCCCCccccccCCCCeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEcC-CCCC--CCCCCCceEEEEE-chhhhh
Q 035484 80 DGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPR-MPYP--FSAPIQAEIPIIF-DVNAVE 154 (178)
Q Consensus 80 DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~-~~~~--~~~~~d~e~~l~l-d~~~~~ 154 (178)
||+++++||+|+||++++|+|++++++||||||||...|.. ||+|+|||+++ ++.+ ++. +++|++|+| ||+...
T Consensus 98 DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~-d~~e~~l~l~D~~~~~ 176 (521)
T 1v10_A 98 DGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDV-DDASTVITIADWYHSL 176 (521)
T ss_dssp SCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSB-CSGGGEEEEEEECSSC
T ss_pred CCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCC-CCceeEEEEcccccCC
Confidence 99999999999999999999997789999999999998886 99999999987 3322 222 126899999 886422
Q ss_pred hh-cc--cCCCCCCCceEEECCCCC
Q 035484 155 ND-MK--YGGGPDSSDACTINGLPG 176 (178)
Q Consensus 155 ~~-~~--~~~~~~~~~~~liNG~~~ 176 (178)
.. +. .+...+.+|.+||||+.+
T Consensus 177 ~~~~~~~~~~~~~~~d~~liNG~~~ 201 (521)
T 1v10_A 177 STVLFPNPNKAPPAPDTTLINGLGR 201 (521)
T ss_dssp CC-------CCCSCCSEEEETTBCC
T ss_pred HHHHhhccCCCCCCCCEEEECCccc
Confidence 21 11 122345789999999976
No 6
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=2.3e-41 Score=295.54 Aligned_cols=163 Identities=31% Similarity=0.499 Sum_probs=139.1
Q ss_pred EEEEEEEEEEEEEecCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCC-----CcceeecCccccCCCCCCCCCCc
Q 035484 11 KSFLFNVEWKTVSRLCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQ-----NTTIRWHGIRQLRTGWSDGPAYI 85 (178)
Q Consensus 11 ~~~~l~i~~~~~~~~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~-----~~~~H~HG~~~~~~~~~DG~~~~ 85 (178)
..|+|+|++..+.++|..+.+ |+|||++|||+|++++||+|+|+|+|.+++ ++++||||+.++.++|+||++++
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~-~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQA-VVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEE-EEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred ceEEEEEEEEEEcCCCcEEEE-EEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 579999999999999999999 999999999999999999999999999985 79999999999888899999999
Q ss_pred cccccCCCCeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEcC-CCCCCCCCC-CceEEEEE-chhhhhhhcccCC
Q 035484 86 TQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPR-MPYPFSAPI-QAEIPIIF-DVNAVENDMKYGG 161 (178)
Q Consensus 86 ~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~-~~~~~~~~~-d~e~~l~l-d~~~~~~~~~~~~ 161 (178)
+||+|+||++++|+|++.+++||||||||...|+. ||+|+|||+++ ++.+....+ ++|++|+| ||+..... ..+.
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~-~~~~ 161 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAK-LGPR 161 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTT-TSCS
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCccc-cccC
Confidence 99999999999999998789999999999998886 99999999987 332211122 25678888 98753222 1223
Q ss_pred CCCCCceEEECCCC
Q 035484 162 GPDSSDACTINGLP 175 (178)
Q Consensus 162 ~~~~~~~~liNG~~ 175 (178)
.+..+|++||||+.
T Consensus 162 ~p~~~d~~liNG~~ 175 (499)
T 3pxl_A 162 FPGGADATLINGKG 175 (499)
T ss_dssp SCSSCSEEEETTBC
T ss_pred CCCCCcEEEECCCC
Confidence 34578999999985
No 7
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=8.1e-41 Score=277.56 Aligned_cols=167 Identities=28% Similarity=0.418 Sum_probs=142.0
Q ss_pred ceEEEEEEEEEEEEEec-CceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccc
Q 035484 9 TIKSFLFNVEWKTVSRL-CNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQ 87 (178)
Q Consensus 9 ~~~~~~l~i~~~~~~~~-g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~ 87 (178)
.+++|+|++++..+.+. |..+.+ |+|||++|||+|++++||+|+|+|+|.++.++++||||+.+....++||+|+++|
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~-~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~ 79 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHT-FAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQ 79 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEE-EEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEE-EEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCccccc
Confidence 37899999999999985 566787 9999999999999999999999999999999999999999987667999999999
Q ss_pred cccCCCCeEEEEEEecccCCceEEeechhhHh----hccEEEEEEEcCCCCCCCCCCCceEEEEE-chhhhhhh-ccc-C
Q 035484 88 CPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQR----ASVYGAFIIYPRMPYPFSAPIQAEIPIIF-DVNAVEND-MKY-G 160 (178)
Q Consensus 88 ~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~----~Gl~G~liV~~~~~~~~~~~~d~e~~l~l-d~~~~~~~-~~~-~ 160 (178)
|+|+||++++|+|++ +++||||||||...++ .||+|+|||+++++.+++..+|+|++|+| ||+..... ... +
T Consensus 80 ~~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~~~d~e~~l~l~dw~~~~~~~~~~~~ 158 (318)
T 3g5w_A 80 HAIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKTVTKDYILMLSDWVSSWANKPGEGG 158 (318)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHHTCCEEEEEEEEEECGGGTTCTTCCC
T ss_pred ccCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccccccceeEEEEEeeccccccccccCC
Confidence 999999999999987 7999999999987654 49999999998865444445679999999 88753322 222 2
Q ss_pred CCCCCCceEEECCCCCC
Q 035484 161 GGPDSSDACTINGLPGP 177 (178)
Q Consensus 161 ~~~~~~~~~liNG~~~p 177 (178)
.....++.++|||+.+|
T Consensus 159 ~~~~~~d~~~ING~~~~ 175 (318)
T 3g5w_A 159 IPGDVFDYYTINAKSFP 175 (318)
T ss_dssp CTTCCCCEEEETTBCBT
T ss_pred CCCCcCcEEEEcCcCCC
Confidence 22346899999999876
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=5.1e-40 Score=290.59 Aligned_cols=165 Identities=28% Similarity=0.422 Sum_probs=141.9
Q ss_pred cCCceEEEEEEEEEEE--EEecCce-eEEEEEEcCccCCceEEEecCCEEEEEEEeCC-CCCcceeecCccccCCCCCCC
Q 035484 6 SSQTIKSFLFNVEWKT--VSRLCNT-KLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRV-AQNTTIRWHGIRQLRTGWSDG 81 (178)
Q Consensus 6 ~~~~~~~~~l~i~~~~--~~~~g~~-~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~-~~~~~~H~HG~~~~~~~~~DG 81 (178)
..+++++|+|++++.. +.++|.. +.+ |+|||++|||+|++++||+|+|+|+|.+ ++++++||||+.++.++|+||
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~-~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG 107 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKV-MLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDG 107 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEE-EEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEE-EEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCC
Confidence 4577899999999998 7778988 888 9999999999999999999999999999 689999999999987788999
Q ss_pred CCCccccccCC-CCeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEcCCCCCCCCCCCceE-EEEE-chhhh----
Q 035484 82 PAYITQCPIKG-GQSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPRMPYPFSAPIQAEI-PIIF-DVNAV---- 153 (178)
Q Consensus 82 ~~~~~~~~i~p-g~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~d~e~-~l~l-d~~~~---- 153 (178)
+++++||+|+| |++++|+|++ .++||||||||...|.. ||+|+|||++++. ..||+|+ +|+| ||+..
T Consensus 108 ~~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~----~~~d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 108 ANGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS----LPYDIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp CBTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHH
T ss_pred CCccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCc----CCCcccceEEEEeccccCCHHH
Confidence 99999999999 9999999997 78999999999988886 9999999998843 2466787 7888 87531
Q ss_pred -hhhcccCCCCCCCceEEECCCCCC
Q 035484 154 -ENDMKYGGGPDSSDACTINGLPGP 177 (178)
Q Consensus 154 -~~~~~~~~~~~~~~~~liNG~~~p 177 (178)
..... ...+..++.+||||+..+
T Consensus 183 ~~~~~~-~~~~~~~d~~liNG~~~~ 206 (559)
T 2q9o_A 183 LVHFTQ-NNAPPFSDNVLINGTAVN 206 (559)
T ss_dssp HHHHHT-TSCCCCBSEEEETTBCBC
T ss_pred Hhhhhh-cCCCCccceeEECCcccc
Confidence 11111 223457899999999854
No 9
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=5.5e-40 Score=287.20 Aligned_cols=161 Identities=29% Similarity=0.445 Sum_probs=137.5
Q ss_pred EEEEEEEEEEEEEecCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCC-----CCcceeecCccccCCCCCCCCCCc
Q 035484 11 KSFLFNVEWKTVSRLCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVA-----QNTTIRWHGIRQLRTGWSDGPAYI 85 (178)
Q Consensus 11 ~~~~l~i~~~~~~~~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~-----~~~~~H~HG~~~~~~~~~DG~~~~ 85 (178)
..|+|++++..+.++|..+.+ |+|||++ ||+|++++||+|+|+|+|.++ +++++||||+.+...+|+||++++
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~-~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~v 82 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAG-ILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGV 82 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEE-EEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTT
T ss_pred CeEEEEEEEEEECCCCeEEEE-EEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccc
Confidence 369999999999999999998 9999999 999999999999999999999 999999999999877889999999
Q ss_pred cccccCCCCeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEcC-CCCCCCCCC-CceEEEEE-chhhhhhh-cccC
Q 035484 86 TQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPR-MPYPFSAPI-QAEIPIIF-DVNAVEND-MKYG 160 (178)
Q Consensus 86 ~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~-~~~~~~~~~-d~e~~l~l-d~~~~~~~-~~~~ 160 (178)
+||+|+||++++|+|++++++||||||||...|.. ||+|+|||+++ ++.+...+. ++|++|+| ||+..... +. +
T Consensus 83 tq~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~-~ 161 (503)
T 1hfu_A 83 NQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ-G 161 (503)
T ss_dssp TBCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC--
T ss_pred ccCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc-C
Confidence 99999999999999997789999999999998886 99999999987 332211111 26899999 88753322 22 1
Q ss_pred CCCCCCceEEECCCCC
Q 035484 161 GGPDSSDACTINGLPG 176 (178)
Q Consensus 161 ~~~~~~~~~liNG~~~ 176 (178)
.+.+|.+||||+.+
T Consensus 162 --~~~~d~~liNG~~~ 175 (503)
T 1hfu_A 162 --AAQPDATLINGKGR 175 (503)
T ss_dssp ----CCSEEEETTBCC
T ss_pred --CCCCCEEEECcccc
Confidence 14689999999976
No 10
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=1.5e-38 Score=265.81 Aligned_cols=167 Identities=30% Similarity=0.488 Sum_probs=141.1
Q ss_pred ceEEEEEEEEEEEEEec-CceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccc
Q 035484 9 TIKSFLFNVEWKTVSRL-CNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQ 87 (178)
Q Consensus 9 ~~~~~~l~i~~~~~~~~-g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~ 87 (178)
.+++|+|++++..++++ |..+.+ |+|||++|||+|++++||+|+|+|+|.+++++++||||+.+...+|+||+|+++|
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~-~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq 80 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKV-FGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQ 80 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEE-EEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEE-EEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCcccc
Confidence 46889999999999985 888898 9999999999999999999999999999999999999999998888999999999
Q ss_pred cccCCCCeEEEEEEecccCCceEEeechhh--Hh--hccEEEEEEEcCCCCCCCCCCCceEEEEE-chhhhhhh-ccc-C
Q 035484 88 CPIKGGQSYTYEFTIVNQRGTLLWHAHHSW--QR--ASVYGAFIIYPRMPYPFSAPIQAEIPIIF-DVNAVEND-MKY-G 160 (178)
Q Consensus 88 ~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~--~~--~Gl~G~liV~~~~~~~~~~~~d~e~~l~l-d~~~~~~~-~~~-~ 160 (178)
|+|.||++++|+|++ +++||||||||... +. .||+|++||+++++.+.+..+|+|++|+| ||+..... ... +
T Consensus 81 ~~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~g 159 (339)
T 2zwn_A 81 QPIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEKRVTKDVIMMMSTWESAVADKYGEGG 159 (339)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGGGCSEEEEEEEEEECGGGTTCTTCCC
T ss_pred CccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccccCCceEEEEeeheecccccccCCCC
Confidence 999999999999997 78999999999865 33 49999999998854443344578999999 88652222 111 1
Q ss_pred CCCCCCceEEECCCCCC
Q 035484 161 GGPDSSDACTINGLPGP 177 (178)
Q Consensus 161 ~~~~~~~~~liNG~~~p 177 (178)
.....++.++|||+.+|
T Consensus 160 ~~~~~~~~~~ING~~~~ 176 (339)
T 2zwn_A 160 TPMNVADYFSVNAKSFP 176 (339)
T ss_dssp STTSCCCEEEETTBCTT
T ss_pred CCccccceEEEccccCC
Confidence 12225799999999875
No 11
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=6.4e-40 Score=283.43 Aligned_cols=163 Identities=20% Similarity=0.324 Sum_probs=136.4
Q ss_pred ceEEEEEEEEEEEEEe-cCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccc
Q 035484 9 TIKSFLFNVEWKTVSR-LCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQ 87 (178)
Q Consensus 9 ~~~~~~l~i~~~~~~~-~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~ 87 (178)
..++|+|++++...++ +|..+.+ |+|||++|||+|++++||+|+|+|+|.+++++++||||+.++.. +||+| |
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~-~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~ 90 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASV-WGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---A 90 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCC-EEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---G
T ss_pred CceEEEEEEEEEEEEcCCCceeEE-EEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---c
Confidence 3578999999999988 6888898 99999999999999999999999999999999999999999876 99997 8
Q ss_pred cccCCCCeEEEEEEecccCCceEEeech----hhHhh-ccEEEEEEEcCC--CCCCCCCC-CceEEEEE-chhhhhhh-c
Q 035484 88 CPIKGGQSYTYEFTIVNQRGTLLWHAHH----SWQRA-SVYGAFIIYPRM--PYPFSAPI-QAEIPIIF-DVNAVEND-M 157 (178)
Q Consensus 88 ~~i~pg~~~~y~~~~~~~~Gt~~yH~h~----~~~~~-Gl~G~liV~~~~--~~~~~~~~-d~e~~l~l-d~~~~~~~-~ 157 (178)
|+|+||++++|+|++.+++||||||||. ..|.. ||+|+|||++++ ..+++..| |+|++|+| ||+..... +
T Consensus 91 ~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~ 170 (451)
T 2uxt_A 91 RMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTP 170 (451)
T ss_dssp GCBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCE
T ss_pred CcCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCce
Confidence 9999999999999985569999999998 44554 999999999882 23344443 58999999 87642111 1
Q ss_pred ---ccCCCCCCCceEEECCCCCC
Q 035484 158 ---KYGGGPDSSDACTINGLPGP 177 (178)
Q Consensus 158 ---~~~~~~~~~~~~liNG~~~p 177 (178)
..+...+.++.+||||+.+|
T Consensus 171 ~~~~~~~~~~~~d~~liNG~~~p 193 (451)
T 2uxt_A 171 EYNEPGSGGFVGDTLLVNGVQSP 193 (451)
T ss_dssp ECCCCSSSCCCCSEEEETTEESC
T ss_pred ecccccCCCCcCCEEEECCcccc
Confidence 12234567899999999887
No 12
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1.3e-38 Score=277.23 Aligned_cols=165 Identities=20% Similarity=0.285 Sum_probs=135.8
Q ss_pred CceEEEEEEEEEEEEEecCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccc
Q 035484 8 QTIKSFLFNVEWKTVSRLCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQ 87 (178)
Q Consensus 8 ~~~~~~~l~i~~~~~~~~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~ 87 (178)
...+.|+|+++++.++++|..+.+ |+|||++|||+|++++||+|+|+|+|.+++++++||||+.++.. +||+| |
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~-~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~ 88 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATT-WGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---Q 88 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEE-EEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---T
T ss_pred CCCeeEEEEEEEEEEccCCeEEEE-EEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---c
Confidence 445789999999999999888898 99999999999999999999999999999999999999998764 99986 8
Q ss_pred cccCCCCeEEEEEEecccCCceEEeechh----hHhh-ccEEEEEEEcC--CCCCCCCCCC-ceEEEEE-chhhhhh-hc
Q 035484 88 CPIKGGQSYTYEFTIVNQRGTLLWHAHHS----WQRA-SVYGAFIIYPR--MPYPFSAPIQ-AEIPIIF-DVNAVEN-DM 157 (178)
Q Consensus 88 ~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~----~~~~-Gl~G~liV~~~--~~~~~~~~~d-~e~~l~l-d~~~~~~-~~ 157 (178)
|+|.||++++|+|++.+++||||||||.. .|.. ||+|++||+++ ...+++..|| +|++|+| ||+.... ++
T Consensus 89 ~~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~ 168 (488)
T 3od3_A 89 GIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQI 168 (488)
T ss_dssp CCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSB
T ss_pred CcCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCce
Confidence 99999999999999866689999999974 3444 99999999998 3334555443 6899999 8753211 11
Q ss_pred ccC------CCCCCCceEEECCCCCCC
Q 035484 158 KYG------GGPDSSDACTINGLPGPL 178 (178)
Q Consensus 158 ~~~------~~~~~~~~~liNG~~~p~ 178 (178)
... ..++.+|.+||||+.+|+
T Consensus 169 ~~~~~~~~~~~g~~gd~~lvNG~~~p~ 195 (488)
T 3od3_A 169 DYQLDVMTAAVGWFGDTLLTNGAIYPQ 195 (488)
T ss_dssp CCCCSHHHHHHCCCCSEEEETTBSSCE
T ss_pred eccccccccccCCCCCEEEEcCCcCcc
Confidence 110 123578999999999874
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.8e-38 Score=274.94 Aligned_cols=164 Identities=27% Similarity=0.388 Sum_probs=132.4
Q ss_pred CcCCceEEEEEEEEEEEEEe-cCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCC
Q 035484 5 SSSQTIKSFLFNVEWKTVSR-LCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPA 83 (178)
Q Consensus 5 ~~~~~~~~~~l~i~~~~~~~-~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~ 83 (178)
++.+.+++|+|+++++.+++ +|..+.+ |+|||++|||+|++++||+|+|+|+|.+++++++||||+.++. ++||+|
T Consensus 45 ~~~~~~~~~~L~~~~~~~~~~~G~~~~~-~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p 121 (481)
T 3zx1_A 45 SKEKNIFHATLEIKENHIELIKGKKTLF-YTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP 121 (481)
T ss_dssp CCSTTEEEEEEEEEEEEECCSTTCCEEE-EEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT
T ss_pred ccCCCeEEEEEEEEEEEEEccCCcEEEE-EEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc
Confidence 35678899999999999997 5778888 9999999999999999999999999999999999999999864 599986
Q ss_pred CccccccCCCCeEEEEEEeccc-CCceEEeechh----hHhh-ccEEEEEEEcCCCCCCCCCCCceEEEEE-chhhhhhh
Q 035484 84 YITQCPIKGGQSYTYEFTIVNQ-RGTLLWHAHHS----WQRA-SVYGAFIIYPRMPYPFSAPIQAEIPIIF-DVNAVEND 156 (178)
Q Consensus 84 ~~~~~~i~pg~~~~y~~~~~~~-~Gt~~yH~h~~----~~~~-Gl~G~liV~~~~~~~~~~~~d~e~~l~l-d~~~~~~~ 156 (178)
||+|.||++++|+|++.++ +||||||||.. .|.. ||+|+|||++++..++ ..++++ |+| ||+.....
T Consensus 122 ---q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~--~~~~~~-l~l~D~~~~~~g 195 (481)
T 3zx1_A 122 ---HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALS--HLKEKD-LMISDLRLDENA 195 (481)
T ss_dssp ---TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTT--TSEEEE-EEEEEECCBTTS
T ss_pred ---cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCcccccc--CCCcee-EEEEEEeccCCC
Confidence 8999999999999998543 79999999973 4554 9999999999854333 233555 666 76531111
Q ss_pred -ccc-----CCCCCCCceEEECCCCCC
Q 035484 157 -MKY-----GGGPDSSDACTINGLPGP 177 (178)
Q Consensus 157 -~~~-----~~~~~~~~~~liNG~~~p 177 (178)
+.. ...+..++.+||||+.+|
T Consensus 196 ~~~~~~~~~~~~g~~gd~~lvNG~~~p 222 (481)
T 3zx1_A 196 QIPNNNLNDWLNGREGEFVLINGQFKP 222 (481)
T ss_dssp CCCCCCHHHHHHCCCCSEEEETTEESC
T ss_pred ccccccchhhccCCcCCEEEECCccCc
Confidence 110 011347899999999887
No 14
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=1.1e-37 Score=255.31 Aligned_cols=155 Identities=32% Similarity=0.456 Sum_probs=133.4
Q ss_pred CCceEEEEEEEEEEEEEec-CceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCc
Q 035484 7 SQTIKSFLFNVEWKTVSRL-CNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYI 85 (178)
Q Consensus 7 ~~~~~~~~l~i~~~~~~~~-g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~ 85 (178)
.+..++|+|++++..+++. |..+.+ |+|||++|||+|++++||+|+|+|+|.+++++++||||+.. .++||+|+.
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~-~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~ 106 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKG-WSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGI 106 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEE-EEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTS
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEE-EEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCc
Confidence 4567899999999998885 777888 99999999999999999999999999999999999999973 359999999
Q ss_pred cccccCCCCeEEEEEEecccCCceEEeechh---hHhh-ccEEEEEEEcCCCCCCCCCCCceEEEEE-chhhhhhhcccC
Q 035484 86 TQCPIKGGQSYTYEFTIVNQRGTLLWHAHHS---WQRA-SVYGAFIIYPRMPYPFSAPIQAEIPIIF-DVNAVENDMKYG 160 (178)
Q Consensus 86 ~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~---~~~~-Gl~G~liV~~~~~~~~~~~~d~e~~l~l-d~~~~~~~~~~~ 160 (178)
++++|+||++++|+|++ +++||||||||.. .|.. ||+|+|||++++..+ .+|+|++|++ ||+.. .+
T Consensus 107 ~~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~---~~d~e~~l~~~d~~~~-----~g 177 (288)
T 3gdc_A 107 GAGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP---PADDEMVMVMNGYNTD-----GG 177 (288)
T ss_dssp TTCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC---CCSEEEEEEEEEECCS-----ST
T ss_pred cceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC---CCcceEEEEEeeEecC-----CC
Confidence 99999999999999987 8999999999986 3444 999999999985432 3458999999 77642 11
Q ss_pred CCCCCCceEEECCCCCC
Q 035484 161 GGPDSSDACTINGLPGP 177 (178)
Q Consensus 161 ~~~~~~~~~liNG~~~p 177 (178)
..++.++|||+.++
T Consensus 178 ---~~~~~~~iNG~~~~ 191 (288)
T 3gdc_A 178 ---DDNEFYSVNGLPFH 191 (288)
T ss_dssp ---TCCSEEEETTSTTH
T ss_pred ---CCcceEEECccccc
Confidence 25789999999874
No 15
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=4.1e-37 Score=270.71 Aligned_cols=164 Identities=18% Similarity=0.199 Sum_probs=130.9
Q ss_pred ceEEEEEEEEEEEEE--ecCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCcc
Q 035484 9 TIKSFLFNVEWKTVS--RLCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYIT 86 (178)
Q Consensus 9 ~~~~~~l~i~~~~~~--~~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~ 86 (178)
.+++|+|++++.... ++|..+.+ |+|||++|||+|++++||+|+|+|+|.+++++++||||+.++. ++||++
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~-~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--- 108 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADL-VGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--- 108 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEEC-BEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS---
T ss_pred ceEEEEEEEEEEEEEecCCCCceeE-EEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC---
Confidence 357899999976544 46677888 9999999999999999999999999999999999999999876 399985
Q ss_pred ccccCCCCeEEEEEEecccCCceEEeechhhH----h-hccEEEEEEEcCCCC--CCCCCC-CceEEEEE-chhhhh-hh
Q 035484 87 QCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQ----R-ASVYGAFIIYPRMPY--PFSAPI-QAEIPIIF-DVNAVE-ND 156 (178)
Q Consensus 87 ~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~----~-~Gl~G~liV~~~~~~--~~~~~~-d~e~~l~l-d~~~~~-~~ 156 (178)
+|+|.||++++|+|++.+++||||||||...+ . .||+|+|||++++.. +++..+ ++|++|+| ||+... .+
T Consensus 109 ~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~ 188 (534)
T 3abg_A 109 EDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGN 188 (534)
T ss_dssp SSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSC
T ss_pred CCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCc
Confidence 78999999999999886668999999999764 3 399999999998433 333322 46888999 764311 11
Q ss_pred cc--cC-CCCCCCceEEECCCCCCC
Q 035484 157 MK--YG-GGPDSSDACTINGLPGPL 178 (178)
Q Consensus 157 ~~--~~-~~~~~~~~~liNG~~~p~ 178 (178)
+. .+ .....+|.+||||+.+|+
T Consensus 189 ~~~~~~~~~~~~gd~~lvNG~~~p~ 213 (534)
T 3abg_A 189 LVTTNGELNSFWGDVIHVNGQPWPF 213 (534)
T ss_dssp BCCCTTCSSCCCCSEEEETTEESCB
T ss_pred eeccCCCCccccCceeccCCccCce
Confidence 21 12 124578999999999874
No 16
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=2.2e-36 Score=264.91 Aligned_cols=167 Identities=20% Similarity=0.200 Sum_probs=131.6
Q ss_pred ceEEEEEEEEEEEEEec-C-ceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCC----------------------Cc
Q 035484 9 TIKSFLFNVEWKTVSRL-C-NTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQ----------------------NT 64 (178)
Q Consensus 9 ~~~~~~l~i~~~~~~~~-g-~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~----------------------~~ 64 (178)
....|+|++++...++. + ..+.+ |+|||++|||+|++++||+|+|+|+|.+++ ++
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~-~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~t 102 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRL-WGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKT 102 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEE-EEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCB
T ss_pred CceEEEEEEEEeeeeeCCCCCCceE-EEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCc
Confidence 34569999999887764 3 47888 999999999999999999999999999986 89
Q ss_pred ceeecCccccCCCCCCCCCC--ccccccCCC---CeEEEEEEecccCCceEEeechhh----Hhh-ccEEEEEEEcCCCC
Q 035484 65 TIRWHGIRQLRTGWSDGPAY--ITQCPIKGG---QSYTYEFTIVNQRGTLLWHAHHSW----QRA-SVYGAFIIYPRMPY 134 (178)
Q Consensus 65 ~~H~HG~~~~~~~~~DG~~~--~~~~~i~pg---~~~~y~~~~~~~~Gt~~yH~h~~~----~~~-Gl~G~liV~~~~~~ 134 (178)
++||||+.++. ++||+++ +++|+|+|| ++++|+|++.+++||||||||..+ |.. ||+|+|||++++..
T Consensus 103 siHwHGl~~~~--~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~ 180 (513)
T 2wsd_A 103 VVHLHGGVTPD--DSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEK 180 (513)
T ss_dssp CEEEETCCCCG--GGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGG
T ss_pred EEEcCCCcCCC--ccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccc
Confidence 99999999875 4999985 689999999 555999987678999999999865 333 99999999998332
Q ss_pred CCCC-CCCceEEEEE-chhhhhh-hcc---------------cCCCCCCCceEEECCCCCCC
Q 035484 135 PFSA-PIQAEIPIIF-DVNAVEN-DMK---------------YGGGPDSSDACTINGLPGPL 178 (178)
Q Consensus 135 ~~~~-~~d~e~~l~l-d~~~~~~-~~~---------------~~~~~~~~~~~liNG~~~p~ 178 (178)
+++. .+|+|++|+| ||+.... ++. .......++++||||+.+|+
T Consensus 181 ~~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~p~ 242 (513)
T 2wsd_A 181 RLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWPY 242 (513)
T ss_dssp GGCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEESCE
T ss_pred cccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCcccce
Confidence 2221 2458999999 8743111 110 01123578999999999873
No 17
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=3e-36 Score=259.55 Aligned_cols=164 Identities=24% Similarity=0.372 Sum_probs=133.2
Q ss_pred cCCceEEEEEEEEEEEEEecCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCc
Q 035484 6 SSQTIKSFLFNVEWKTVSRLCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYI 85 (178)
Q Consensus 6 ~~~~~~~~~l~i~~~~~~~~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~ 85 (178)
+.+..++|+|+++++.+.++|..+.+ |+|||++|||+|++++||+|+|+|+|.+++++++||||+.++. ++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~-~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~-- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATL-LTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF-- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEE-EEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT--
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEE-EEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc--
Confidence 34677899999999999999988998 9999999999999999999999999999999999999999865 699986
Q ss_pred cccccCCCCeEEEEEEec-ccCCceEEeechh----hHhh-ccEEEEEEEcCC-CCCCCCCCCceEEEEE-chhhhhhhc
Q 035484 86 TQCPIKGGQSYTYEFTIV-NQRGTLLWHAHHS----WQRA-SVYGAFIIYPRM-PYPFSAPIQAEIPIIF-DVNAVENDM 157 (178)
Q Consensus 86 ~~~~i~pg~~~~y~~~~~-~~~Gt~~yH~h~~----~~~~-Gl~G~liV~~~~-~~~~~~~~d~e~~l~l-d~~~~~~~~ 157 (178)
..|+||++++|+|++. +++||||||||.. .|.. ||+|+|||+++. ..+. ..+|+|++|+| ||+......
T Consensus 87 --~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~-~~~~~e~~l~l~D~~~~~~~~ 163 (439)
T 2xu9_A 87 --LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPE-LREAEEHLLVLKDLALQGGRP 163 (439)
T ss_dssp --CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHH-HHTSEEEEEEEEEECEETTEE
T ss_pred --ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCcc-CCCCCcEEEEEEeeeeCCCCc
Confidence 3599999999999973 5899999999974 3554 999999999873 2221 13458999999 876421111
Q ss_pred c-c---C-CCCCCCceEEECCCCCC
Q 035484 158 K-Y---G-GGPDSSDACTINGLPGP 177 (178)
Q Consensus 158 ~-~---~-~~~~~~~~~liNG~~~p 177 (178)
. . + ..+..++.++|||+.+|
T Consensus 164 ~~~~~~~~~~g~~~~~~~iNG~~~p 188 (439)
T 2xu9_A 164 APHTPMDWMNGKEGDLVLVNGALRP 188 (439)
T ss_dssp CCCCHHHHHHCCCCSEEEETTEESC
T ss_pred CCCCccccccCCCCCEEEECCccCC
Confidence 1 0 0 01246799999999876
No 18
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=3.3e-36 Score=267.51 Aligned_cols=165 Identities=21% Similarity=0.256 Sum_probs=128.0
Q ss_pred CCceEEEEEEEEEEEEEec--CceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCC---------------------
Q 035484 7 SQTIKSFLFNVEWKTVSRL--CNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQN--------------------- 63 (178)
Q Consensus 7 ~~~~~~~~l~i~~~~~~~~--g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~--------------------- 63 (178)
....+.|+|++++...++. +..+.+ |+|||++|||+|++++||+|+|+|+|.|+++
T Consensus 29 ~~~~~~~~i~~~~~~~~~~~~~~~t~~-~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~ 107 (612)
T 3gyr_A 29 DEVTRETEIALRPTWVRLHPQLPPTLM-WGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPN 107 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEE-EEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGG
T ss_pred CCCcceEEEEEEEEEEeecCCCCcceE-EEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccc
Confidence 3455789999999888774 356788 9999999999999999999999999999765
Q ss_pred --------------------cceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechhh----Hh
Q 035484 64 --------------------TTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSW----QR 119 (178)
Q Consensus 64 --------------------~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~----~~ 119 (178)
+++||||+++.. ++||++ ||+|.||++++|+|++.+++||||||||..+ |.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~ 182 (612)
T 3gyr_A 108 TEPGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNV 182 (612)
T ss_dssp GSCSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHT
T ss_pred ccccccccccccccccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhh
Confidence 567888887754 488875 9999999999999998677899999999743 44
Q ss_pred h-ccEEEEEEEcC--CCCCCCCCCCceEEEEE-chhhhhh------h-c---------------ccCCCCCCCceEEECC
Q 035484 120 A-SVYGAFIIYPR--MPYPFSAPIQAEIPIIF-DVNAVEN------D-M---------------KYGGGPDSSDACTING 173 (178)
Q Consensus 120 ~-Gl~G~liV~~~--~~~~~~~~~d~e~~l~l-d~~~~~~------~-~---------------~~~~~~~~~~~~liNG 173 (178)
. ||+|+|||+++ +..+++. +|+|++|+| ||+.... . + .....+..++.++|||
T Consensus 183 ~~Gl~G~liI~d~~~~~~~~p~-~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG 261 (612)
T 3gyr_A 183 MAGLYGTYLVRDDEEDALGLPS-GDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNG 261 (612)
T ss_dssp TTTCEEEEEEECHHHHTTTCCC-GGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETT
T ss_pred hccceeEEEEcCccccccCCCC-CCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecC
Confidence 4 99999999988 3333433 458999999 8742100 0 0 0011245789999999
Q ss_pred CCCCC
Q 035484 174 LPGPL 178 (178)
Q Consensus 174 ~~~p~ 178 (178)
+.+|+
T Consensus 262 ~~~p~ 266 (612)
T 3gyr_A 262 RIWPY 266 (612)
T ss_dssp EESCE
T ss_pred Cccce
Confidence 99874
No 19
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=2.7e-36 Score=260.62 Aligned_cols=139 Identities=23% Similarity=0.368 Sum_probs=115.5
Q ss_pred EEEcCc-cCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEE
Q 035484 33 LTVNGE-YSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLW 111 (178)
Q Consensus 33 ~~~Ng~-~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~y 111 (178)
|+|||+ +|||+|++++||+|+|+|+|.+++++++||||+.++. ++||+++ |+|.||++++|+|++.+++|||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~wY 102 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFDVVNRAGTYLY 102 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEECCSCSEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEEcCCCCCceEe
Confidence 999999 9999999999999999999999999999999999874 4999986 899999999999998668999999
Q ss_pred eec----hhhHhh-ccEEEEEEEcCCCCCCCCCCC-ceEEEEE-chhhhhhhccc------CCCCCCCceEEECCCCCC
Q 035484 112 HAH----HSWQRA-SVYGAFIIYPRMPYPFSAPIQ-AEIPIIF-DVNAVENDMKY------GGGPDSSDACTINGLPGP 177 (178)
Q Consensus 112 H~h----~~~~~~-Gl~G~liV~~~~~~~~~~~~d-~e~~l~l-d~~~~~~~~~~------~~~~~~~~~~liNG~~~p 177 (178)
||| ...|.. ||+|+|||++++.. ++.++| +|++|+| ||+....++.. ......++.+||||+.+|
T Consensus 103 H~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~p 180 (448)
T 3aw5_A 103 HPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVKDA 180 (448)
T ss_dssp EECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEETC
T ss_pred ccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCCCcccccccccccccCccccEEEECCcccc
Confidence 999 666665 99999999998433 333456 8999999 87542222211 112357899999999876
No 20
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=3.2e-35 Score=261.75 Aligned_cols=164 Identities=21% Similarity=0.276 Sum_probs=132.9
Q ss_pred CceEEEEEEEEEEEEEec-C-ceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCC----------------------
Q 035484 8 QTIKSFLFNVEWKTVSRL-C-NTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQN---------------------- 63 (178)
Q Consensus 8 ~~~~~~~l~i~~~~~~~~-g-~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~---------------------- 63 (178)
...++|+|++++....+. + ..+.+ |+|||++|||+|++++||+|+|+|+|.++++
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~-~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~ 108 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLM-WGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEE-EEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEE-EEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCccccc
Confidence 446889999999988764 3 47888 9999999999999999999999999999863
Q ss_pred -------------------cceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechhh----Hhh
Q 035484 64 -------------------TTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSW----QRA 120 (178)
Q Consensus 64 -------------------~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~----~~~ 120 (178)
+++||||+.+... +||.+ ||+|.||++++|+|++.+++||||||||... |..
T Consensus 109 ~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~ 183 (612)
T 2g23_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVM 183 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTT
T ss_pred ccccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhh
Confidence 8999999998765 89985 8999999999999988668999999999976 444
Q ss_pred -ccEEEEEEEcCC--CCCCCCCCCceEEEEE-chhhhhh-------hc-------c----cCC----CCCCCceEEECCC
Q 035484 121 -SVYGAFIIYPRM--PYPFSAPIQAEIPIIF-DVNAVEN-------DM-------K----YGG----GPDSSDACTINGL 174 (178)
Q Consensus 121 -Gl~G~liV~~~~--~~~~~~~~d~e~~l~l-d~~~~~~-------~~-------~----~~~----~~~~~~~~liNG~ 174 (178)
||+|+|||++++ +.+++. +|+|++|+| ||+.... ++ . .+. .++.+|.+||||+
T Consensus 184 ~GL~G~liV~~~~~~~~~lp~-~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~ 262 (612)
T 2g23_A 184 AGLYGTYLVRDDEEDALGLPS-GDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGR 262 (612)
T ss_dssp TTCEEEEEEECHHHHTTTCCC-GGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTE
T ss_pred ccceeEEEEcCcccccccCCC-CcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCc
Confidence 999999999883 333443 669999999 8754211 11 0 001 1357899999999
Q ss_pred CCCC
Q 035484 175 PGPL 178 (178)
Q Consensus 175 ~~p~ 178 (178)
.+|+
T Consensus 263 ~~p~ 266 (612)
T 2g23_A 263 IWPY 266 (612)
T ss_dssp ESCE
T ss_pred cCCe
Confidence 9874
No 21
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.1e-34 Score=236.27 Aligned_cols=135 Identities=21% Similarity=0.281 Sum_probs=113.1
Q ss_pred cCCceEEEEEEEEEEEEEecCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCc
Q 035484 6 SSQTIKSFLFNVEWKTVSRLCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYI 85 (178)
Q Consensus 6 ~~~~~~~~~l~i~~~~~~~~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~ 85 (178)
+.+.+++|+|++++.. .+...... +++||++|||+|++++||+|+|+|+|.+++++++||||+.++. ++||++ +
T Consensus 3 ~~g~~~~~~l~~~~~~--~~~~~~~~-~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~-~ 76 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA--DGQMGYGF-EKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-M 76 (276)
T ss_dssp -CCCEEEEEEEEEECT--TSCEEEES-STTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-T
T ss_pred CcceEEEEEEEEEeCC--CCceecce-eccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCc-C
Confidence 5688999999999743 12223355 8899999999999999999999999999999999999999876 499999 8
Q ss_pred cccccCCCCeEEEEEEecc------------cCCceEEeechhh------Hhh-ccEEEEEEEcCCCCCCCCCCCceEEE
Q 035484 86 TQCPIKGGQSYTYEFTIVN------------QRGTLLWHAHHSW------QRA-SVYGAFIIYPRMPYPFSAPIQAEIPI 146 (178)
Q Consensus 86 ~~~~i~pg~~~~y~~~~~~------------~~Gt~~yH~h~~~------~~~-Gl~G~liV~~~~~~~~~~~~d~e~~l 146 (178)
+||+|.||++++|+|++.+ ++||||||||... +.. ||+|+|||+++.... .|+|++|
T Consensus 77 t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~----~drE~~l 152 (276)
T 3kw8_A 77 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL----PDATHTI 152 (276)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC----CSEEEEE
T ss_pred CcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc----cccceEE
Confidence 9999999999999999843 3799999999853 444 999999999984321 2699999
Q ss_pred EE-ch
Q 035484 147 IF-DV 150 (178)
Q Consensus 147 ~l-d~ 150 (178)
++ |+
T Consensus 153 ~l~~~ 157 (276)
T 3kw8_A 153 VFNDM 157 (276)
T ss_dssp EEETT
T ss_pred Eeccc
Confidence 98 54
No 22
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=2.2e-33 Score=233.77 Aligned_cols=166 Identities=20% Similarity=0.177 Sum_probs=129.2
Q ss_pred cCCceEEEEEEEEEEEEEec-CceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCC
Q 035484 6 SSQTIKSFLFNVEWKTVSRL-CNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAY 84 (178)
Q Consensus 6 ~~~~~~~~~l~i~~~~~~~~-g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~ 84 (178)
+.+.+++|+|++++..+++. |..+.+ |+|||++|||+|++++||+|+|+|+|. .+++||||+.+......||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~g~~~~~-~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~ 103 (333)
T 1mzy_A 28 SGPVINEFEMRIIEKEVQLDEDAYLQA-MTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGG 103 (333)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEE-EEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEE-EEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCc
Confidence 45678999999999999884 888888 999999999999999999999999999 4789999998765423444444
Q ss_pred ccccccCCCCeEEEEEEecccCCceEEeechhh-----Hhh-ccEEEEEEEcCCCC----CCCCCCCceEEEEE-chhhh
Q 035484 85 ITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSW-----QRA-SVYGAFIIYPRMPY----PFSAPIQAEIPIIF-DVNAV 153 (178)
Q Consensus 85 ~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~-----~~~-Gl~G~liV~~~~~~----~~~~~~d~e~~l~l-d~~~~ 153 (178)
.+ .|.||++++|+|++ +++||||||||... |.. ||+|++||++++.. +.+..+|+|++|++ ||+..
T Consensus 104 ~~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~ 180 (333)
T 1mzy_A 104 LT--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIP 180 (333)
T ss_dssp GC--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCC
T ss_pred ee--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccC
Confidence 44 49999999999997 78999999999863 554 99999999987422 22345779999998 87541
Q ss_pred --hh-hccc-------------CCCCCCCceEEECCCCCCC
Q 035484 154 --EN-DMKY-------------GGGPDSSDACTINGLPGPL 178 (178)
Q Consensus 154 --~~-~~~~-------------~~~~~~~~~~liNG~~~p~ 178 (178)
.. ++.. ......++.++|||+.+++
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~ 221 (333)
T 1mzy_A 181 KDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNGAVGAL 221 (333)
T ss_dssp BCTTSCBCCCSSHHHHHHHHHHHHTTTCCSEEEETTSTTTT
T ss_pred ccccccccccccccccccchhHHhhccCCcEEEECCccccc
Confidence 00 0100 0112468999999998653
No 23
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=3.8e-33 Score=232.14 Aligned_cols=161 Identities=20% Similarity=0.300 Sum_probs=129.0
Q ss_pred cCCceEEEEEEEEEEEEEe-cCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCC--CCcceeecCccccCCCCCCCC
Q 035484 6 SSQTIKSFLFNVEWKTVSR-LCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVA--QNTTIRWHGIRQLRTGWSDGP 82 (178)
Q Consensus 6 ~~~~~~~~~l~i~~~~~~~-~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~--~~~~~H~HG~~~~~~~~~DG~ 82 (178)
..+++++|+|++++..+++ +|..+.+ |+|||++|||+|++++||+|+|+|+|.++ .++++||||+.. +||.
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~-~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~ 107 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRY-WTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGG 107 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEE-EEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEE-EEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCC
Confidence 4567899999999999998 6888888 99999999999999999999999999986 599999999852 6887
Q ss_pred CCccccccCCCCeEEEEEEecccCCceEEeech---hhHhh-ccEEEEEEEcCCCCCCCCCCCceEEEEE-chhhhhh--
Q 035484 83 AYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHH---SWQRA-SVYGAFIIYPRMPYPFSAPIQAEIPIIF-DVNAVEN-- 155 (178)
Q Consensus 83 ~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~---~~~~~-Gl~G~liV~~~~~~~~~~~~d~e~~l~l-d~~~~~~-- 155 (178)
+.. ..|.||++++|+|++ +++||||||||. ..|.. ||+|++||+++++.| .+|+|++|++ ||+....
T Consensus 108 ~~~--~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~p---~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 108 AAA--TFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLP---KVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TTT--TCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCC---CCSEEEEEEEEEECBSSCTT
T ss_pred Ccc--eeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCCC---CCceEEEEEeeeeeccCccc
Confidence 643 359999999999997 789999999996 34554 999999999875432 3668998888 7754211
Q ss_pred h---ccc---CCCCCCCceEEECCCCCCC
Q 035484 156 D---MKY---GGGPDSSDACTINGLPGPL 178 (178)
Q Consensus 156 ~---~~~---~~~~~~~~~~liNG~~~p~ 178 (178)
. ... ......++.++|||+.+|+
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~iNG~~~~~ 210 (327)
T 1kbv_A 182 AQGLQPFDMDKAVAEQPEYVVFNGHVGAL 210 (327)
T ss_dssp CCEEECBCHHHHHHTCCSEEEETTSTTTT
T ss_pred cccccccChhHhccCCCceEEEcCcccCC
Confidence 0 000 0012367999999999874
No 24
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=2e-33 Score=231.35 Aligned_cols=139 Identities=19% Similarity=0.304 Sum_probs=110.8
Q ss_pred CCCCcCCceEEEEEEEEEEEEEecCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCC
Q 035484 2 LPFSSSQTIKSFLFNVEWKTVSRLCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDG 81 (178)
Q Consensus 2 ~~~~~~~~~~~~~l~i~~~~~~~~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG 81 (178)
+|..+.+.+++++|.++.....+ ....+ +..||++|||+||+++||+|+|+|+|.++++++|||||+.+... +||
T Consensus 21 ~p~~~~~~~~~~~~~a~~~~~~~--~~~~~-~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG 95 (299)
T 3t9w_A 21 MPVRAQGTTRRITMYAEKISDEL--YGYGL-APGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDG 95 (299)
T ss_dssp ------CCEEEEEEEEEEEETTE--EEEES-STTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSC
T ss_pred CCcccCCCEEEEEEEEEecCCCc--eeeee-cCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCC
Confidence 46667889999999999753221 22344 66799999999999999999999999999999999999998754 999
Q ss_pred CCCccccccCCCCeEEEEEEec------------ccCCceEEeechhhH------hh-ccEEEEEEEcCCCCCCCCCCCc
Q 035484 82 PAYITQCPIKGGQSYTYEFTIV------------NQRGTLLWHAHHSWQ------RA-SVYGAFIIYPRMPYPFSAPIQA 142 (178)
Q Consensus 82 ~~~~~~~~i~pg~~~~y~~~~~------------~~~Gt~~yH~h~~~~------~~-Gl~G~liV~~~~~~~~~~~~d~ 142 (178)
++ .+||+|+||++++|+|++. +++||||||||...+ .. ||+|+|||+++.. ..+|+
T Consensus 96 ~~-~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~----~~~d~ 170 (299)
T 3t9w_A 96 TL-MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD----LLPKR 170 (299)
T ss_dssp CT-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----CCCSE
T ss_pred Cc-cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc----cCccc
Confidence 97 7899999999999999863 368999999997542 23 9999999998843 23469
Q ss_pred eEEEEE-ch
Q 035484 143 EIPIIF-DV 150 (178)
Q Consensus 143 e~~l~l-d~ 150 (178)
|++|++ |+
T Consensus 171 e~~l~~~~~ 179 (299)
T 3t9w_A 171 QFTVVFNDM 179 (299)
T ss_dssp EEEEEEETT
T ss_pred cceeeeeee
Confidence 999999 44
No 25
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=1.1e-32 Score=229.64 Aligned_cols=162 Identities=22% Similarity=0.289 Sum_probs=124.5
Q ss_pred CCceEEEEEEEEEEEEEec--CceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCC--CCcceeecCccccCCCCCCCC
Q 035484 7 SQTIKSFLFNVEWKTVSRL--CNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVA--QNTTIRWHGIRQLRTGWSDGP 82 (178)
Q Consensus 7 ~~~~~~~~l~i~~~~~~~~--g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~--~~~~~H~HG~~~~~~~~~DG~ 82 (178)
.+.+++|+|++++..+.+. |..+.+ |+|||++|||+|++++||+|+|+|+|.++ ..|.+|+||.. +.||.
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~dg~~~~~-~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~-----~~~~~ 102 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKKMVIDDKGTTLQA-MTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGAT-----GALGG 102 (336)
T ss_dssp CCCEEEEEEEEEEEEEECSTTCCEEEE-EEETTBSSCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSC-----SGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEE-EEECCccCCCeEEEcCCCEEEEEEEcCCCCCccccceECCCC-----CCCCC
Confidence 4677999999999998865 888898 99999999999999999999999999975 45666666642 35665
Q ss_pred CCccccccCCCCeEEEEEEecccCCceEEeechhh----Hhh-ccEEEEEEEcCCC----CCCCCCCCceEEEEE-chhh
Q 035484 83 AYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSW----QRA-SVYGAFIIYPRMP----YPFSAPIQAEIPIIF-DVNA 152 (178)
Q Consensus 83 ~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~----~~~-Gl~G~liV~~~~~----~~~~~~~d~e~~l~l-d~~~ 152 (178)
+.++ .|.||++++|+|++ +++||||||||..+ |.. ||+|+|||++++. .+.+..+|+|++|++ ||+.
T Consensus 103 ~~~~--~i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~ 179 (336)
T 1oe1_A 103 AKLT--NVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYI 179 (336)
T ss_dssp GGGC--CBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECC
T ss_pred cceE--EeCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeee
Confidence 5554 49999999999997 78999999999853 444 9999999998732 223345789999988 8864
Q ss_pred hhh---hcc----cC---------CCCCCCceEEECCCCCC
Q 035484 153 VEN---DMK----YG---------GGPDSSDACTINGLPGP 177 (178)
Q Consensus 153 ~~~---~~~----~~---------~~~~~~~~~liNG~~~p 177 (178)
... ++. .+ +....++.++|||+.++
T Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~ 220 (336)
T 1oe1_A 180 PKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGA 220 (336)
T ss_dssp CBCTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTT
T ss_pred ccccCCceeecccccccccchhhHhhcCCCCEEEECCeecc
Confidence 211 111 00 01247899999999864
No 26
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=5.5e-32 Score=225.83 Aligned_cols=165 Identities=20% Similarity=0.259 Sum_probs=125.8
Q ss_pred cCCceEEEEEEEEEEEEEec--CceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCC
Q 035484 6 SSQTIKSFLFNVEWKTVSRL--CNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPA 83 (178)
Q Consensus 6 ~~~~~~~~~l~i~~~~~~~~--g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~ 83 (178)
+.+.+++|+|++++..++++ |..+.+ |+|||++|||+|++++||+|+|+|+|.+ +++||||+.+......||..
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~-~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 34 TGPRVVEFTMTIEEKKLVIDREGTEIHA-MTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSCCEEEEEEEEEEEEEECSTTCCEEEE-EEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEE-EEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 45688999999999998875 888888 9999999999999999999999999998 56788887765432233433
Q ss_pred CccccccCCCCeEEEEEEecccCCceEEeechh----hHhh-ccEEEEEEEcCCC----CCCCCCCCceEEEEE-chhhh
Q 035484 84 YITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHS----WQRA-SVYGAFIIYPRMP----YPFSAPIQAEIPIIF-DVNAV 153 (178)
Q Consensus 84 ~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~----~~~~-Gl~G~liV~~~~~----~~~~~~~d~e~~l~l-d~~~~ 153 (178)
..+ .|.||++++|+|++ .++||||||||.. .|.. ||+|++||++++. .+.+..+|+|++|++ ||+..
T Consensus 110 ~~~--~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~ 186 (340)
T 2bw4_A 110 ALT--QVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVP 186 (340)
T ss_dssp GGC--CBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEEEECCC
T ss_pred cce--EeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeeeeeeec
Confidence 344 49999999999997 6799999999986 3554 9999999998732 122335779999988 87641
Q ss_pred h--h-hccc----C---------CCCCCCceEEECCCCCC
Q 035484 154 E--N-DMKY----G---------GGPDSSDACTINGLPGP 177 (178)
Q Consensus 154 ~--~-~~~~----~---------~~~~~~~~~liNG~~~p 177 (178)
. . .+.. + .....++.++|||+.++
T Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~ 226 (340)
T 2bw4_A 187 KDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGA 226 (340)
T ss_dssp BCTTSCBCCCCSHHHHHHHHHHHHHTTCCSEEEETTSTTT
T ss_pred cccCCcccccccccccccchhhHhhcCCCCEEEECCccCC
Confidence 0 0 1100 0 01246899999999863
No 27
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=5.7e-32 Score=232.70 Aligned_cols=160 Identities=17% Similarity=0.262 Sum_probs=129.3
Q ss_pred cCCceEEEEEEEEEEEEEe-cCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCC--CCcceeecCccccCCCCCCCC
Q 035484 6 SSQTIKSFLFNVEWKTVSR-LCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVA--QNTTIRWHGIRQLRTGWSDGP 82 (178)
Q Consensus 6 ~~~~~~~~~l~i~~~~~~~-~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~--~~~~~H~HG~~~~~~~~~DG~ 82 (178)
+.+.+++|+|++++..+.+ +|..+.+ |+|||++|||+|++++||+|+|+|+|.++ .+|++||||+.. .||.
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~-~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~ 97 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVF-WSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGG 97 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEE-EEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEE-EEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCC
Confidence 5578899999999999986 7888888 99999999999999999999999999986 599999999873 6776
Q ss_pred CCccccccCCCCeEEEEEEecccCCceEEeech---hhHhh-ccEEEEEEEcCCCCCCCCCCCceEEEEE-chhhhhh--
Q 035484 83 AYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHH---SWQRA-SVYGAFIIYPRMPYPFSAPIQAEIPIIF-DVNAVEN-- 155 (178)
Q Consensus 83 ~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~---~~~~~-Gl~G~liV~~~~~~~~~~~~d~e~~l~l-d~~~~~~-- 155 (178)
+.. .+|.||++++|+|++ +++||||||||. ..|.. ||+|+|||+++++.+ .+|+|++|++ ||+....
T Consensus 98 ~~~--~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~~---~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 98 AES--SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGLA---PVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGG--CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCC---CCSEEEEEEEEEECBSSCTT
T ss_pred Ccc--EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCCC---CCCceEEEEeeeeeccCccc
Confidence 653 369999999999987 789999999974 45554 999999999875433 4679999999 8754211
Q ss_pred h--c---c-cCCCCCCCceEEECCCCCC
Q 035484 156 D--M---K-YGGGPDSSDACTINGLPGP 177 (178)
Q Consensus 156 ~--~---~-~~~~~~~~~~~liNG~~~p 177 (178)
. . . .......++.++|||+.++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~liNG~~~~ 199 (442)
T 2zoo_A 172 EAGLQPFDMAKAIDEDADYVVFNGSVGS 199 (442)
T ss_dssp CCEEECBCHHHHHTTCCSEEEETTSTTT
T ss_pred ccccccCChhHhccCCCCEEEECCCcCC
Confidence 0 0 0 0111247899999999875
No 28
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=2.3e-32 Score=226.18 Aligned_cols=135 Identities=20% Similarity=0.277 Sum_probs=111.5
Q ss_pred cCCceEEEEEEEEEEEEEecCce-eEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCC
Q 035484 6 SSQTIKSFLFNVEWKTVSRLCNT-KLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAY 84 (178)
Q Consensus 6 ~~~~~~~~~l~i~~~~~~~~g~~-~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~ 84 (178)
+.+.+++++|.++. .++|.. ... +..|+++|||+||+++||+|+|+|+|.++++++|||||+.+... +||++
T Consensus 9 ~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~- 81 (313)
T 3tas_A 9 AGGEVKRIKLYAER---LGGGQMGYGL-EKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK- 81 (313)
T ss_dssp CCCCEEEEEEEEEE---CGGGCEEEES-STTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST-
T ss_pred CCceEEEEEEEEEE---cCCCceeeee-ecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc-
Confidence 45678999998763 234533 344 77799999999999999999999999999999999999998764 89998
Q ss_pred ccccccCCCCeEEEEEEec------------ccCCceEEeechhhH------h-hccEEEEEEEcCCCCCCCCCCCceEE
Q 035484 85 ITQCPIKGGQSYTYEFTIV------------NQRGTLLWHAHHSWQ------R-ASVYGAFIIYPRMPYPFSAPIQAEIP 145 (178)
Q Consensus 85 ~~~~~i~pg~~~~y~~~~~------------~~~Gt~~yH~h~~~~------~-~Gl~G~liV~~~~~~~~~~~~d~e~~ 145 (178)
.++++|.||++++|+|++. +++||||||||...+ . .||+|+|||+++.. ..+|+|++
T Consensus 82 ~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~----~~~d~e~~ 157 (313)
T 3tas_A 82 QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----VLPDRTHT 157 (313)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----BCCSEEEE
T ss_pred cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc----ccccccce
Confidence 4899999999999999752 478999999997543 2 39999999999843 23569999
Q ss_pred EEE-chh
Q 035484 146 IIF-DVN 151 (178)
Q Consensus 146 l~l-d~~ 151 (178)
|++ ||.
T Consensus 158 l~~~d~t 164 (313)
T 3tas_A 158 IVFNDMT 164 (313)
T ss_dssp EEEETTE
T ss_pred eeccchh
Confidence 999 764
No 29
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.96 E-value=1.8e-29 Score=211.28 Aligned_cols=135 Identities=21% Similarity=0.291 Sum_probs=108.2
Q ss_pred cCCceEEEEEEEEEEEEEecCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCc
Q 035484 6 SSQTIKSFLFNVEWKTVSRLCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYI 85 (178)
Q Consensus 6 ~~~~~~~~~l~i~~~~~~~~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~ 85 (178)
..+++++|+|++++. .+|......+.+||++|||+|++++||+|+|+|+|.++++++|||||+.++. ++||++ +
T Consensus 44 ~~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~~--~~DG~~-~ 117 (343)
T 3cg8_A 44 AGGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-M 117 (343)
T ss_dssp -CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-T
T ss_pred CCCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccCC--cCCCcc-c
Confidence 357889999999974 2342211102357999999999999999999999999999999999999874 599999 7
Q ss_pred cccccCCCCeEEEEEEecc------------cCCceEEeechh------hHhh-ccEEEEEEEcCCCCCCCCCCCceEEE
Q 035484 86 TQCPIKGGQSYTYEFTIVN------------QRGTLLWHAHHS------WQRA-SVYGAFIIYPRMPYPFSAPIQAEIPI 146 (178)
Q Consensus 86 ~~~~i~pg~~~~y~~~~~~------------~~Gt~~yH~h~~------~~~~-Gl~G~liV~~~~~~~~~~~~d~e~~l 146 (178)
+||+|.||++++|+|++.+ ++|+||||||.. .+.. ||+|++||+++... ..|+|++|
T Consensus 118 t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~----~pd~e~~l 193 (343)
T 3cg8_A 118 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV----LPDATHTI 193 (343)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC----CCSEEEEE
T ss_pred ccccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC----CCCceEEE
Confidence 8999999999999998732 359999999963 3444 99999999988432 24589999
Q ss_pred EE-ch
Q 035484 147 IF-DV 150 (178)
Q Consensus 147 ~l-d~ 150 (178)
++ ||
T Consensus 194 ~~~d~ 198 (343)
T 3cg8_A 194 VFNDM 198 (343)
T ss_dssp EEETT
T ss_pred Ecccc
Confidence 98 64
No 30
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.96 E-value=1.2e-29 Score=209.28 Aligned_cols=136 Identities=19% Similarity=0.287 Sum_probs=106.1
Q ss_pred EEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCcc--------ccccCCCCeEEEEEEecc
Q 035484 33 LTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYIT--------QCPIKGGQSYTYEFTIVN 104 (178)
Q Consensus 33 ~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~--------~~~i~pg~~~~y~~~~~~ 104 (178)
+++| ++|||+|++++||+|+|+|+|.++++++|||||+..+.. +||++..+ ||+|.||++++|+|++.+
T Consensus 52 ~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~ 128 (306)
T 1sdd_A 52 SRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISE 128 (306)
T ss_dssp CSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCG
T ss_pred cccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEEeCC
Confidence 5678 589999999999999999999999999999999996654 67766542 699999999999999855
Q ss_pred cC---------CceEEeechhh--Hhh-ccEEEEEEEcCC---CCCCCCCCCceEEEEE-chhhhhhhcccCCCCCCCce
Q 035484 105 QR---------GTLLWHAHHSW--QRA-SVYGAFIIYPRM---PYPFSAPIQAEIPIIF-DVNAVENDMKYGGGPDSSDA 168 (178)
Q Consensus 105 ~~---------Gt~~yH~h~~~--~~~-Gl~G~liV~~~~---~~~~~~~~d~e~~l~l-d~~~~~~~~~~~~~~~~~~~ 168 (178)
++ ||||||||... +.. ||+|+|||+++. ..+.+..+|+|++|++ |++.. .... ...++.
T Consensus 129 ~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~---~~~~--~~~~~~ 203 (306)
T 1sdd_A 129 HSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDES---KSWN--QTSSLM 203 (306)
T ss_dssp GGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETT---SSSS--CCCCEE
T ss_pred ccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEecccc---cccc--cCCCcc
Confidence 53 69999999765 334 999999999872 1222334668999999 76421 1111 124688
Q ss_pred EEECCCCC
Q 035484 169 CTINGLPG 176 (178)
Q Consensus 169 ~liNG~~~ 176 (178)
++|||+.+
T Consensus 204 ~~ING~~~ 211 (306)
T 1sdd_A 204 YTVNGYVN 211 (306)
T ss_dssp ECSSSCCS
T ss_pred eeeCCEec
Confidence 99999986
No 31
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.96 E-value=1.4e-28 Score=230.73 Aligned_cols=143 Identities=20% Similarity=0.273 Sum_probs=114.7
Q ss_pred CcCCceEEEEEEEEEEEEEecC----------------------------ceeEEEE-------EEcCc--------cCC
Q 035484 5 SSSQTIKSFLFNVEWKTVSRLC----------------------------NTKLLLL-------TVNGE--------YSG 41 (178)
Q Consensus 5 ~~~~~~~~~~l~i~~~~~~~~g----------------------------~~~~~~~-------~~Ng~--------~pg 41 (178)
.+.+.+|+|-+.|++..+.... ..+.. . +||+. +||
T Consensus 16 ~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 16 PAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKA-LYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp ----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEE-EEEEESSSSTTSBCCCCGGGTTSC
T ss_pred ccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEE-EEEEecceeecCCcccccccCCcC
Confidence 3457899999999998765531 11222 3 57777 899
Q ss_pred ceEEEecCCEEEEEEEeCCCCCcceeecCccccC----CCCCCCCCC--ccccccCCCCeEEEEEEeccc---------C
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLR----TGWSDGPAY--ITQCPIKGGQSYTYEFTIVNQ---------R 106 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~----~~~~DG~~~--~~~~~i~pg~~~~y~~~~~~~---------~ 106 (178)
|+|++++||+|+|+|+|.+++++++||||+.++. .+|.||+++ ++||+|+||++++|+|++.++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 9999999999999999999999999999999874 356777777 789999999999999998554 4
Q ss_pred CceEEeechhhHh---hccEEEEEEEcCCCC--CCCCCCCceEEEEE
Q 035484 107 GTLLWHAHHSWQR---ASVYGAFIIYPRMPY--PFSAPIQAEIPIIF 148 (178)
Q Consensus 107 Gt~~yH~h~~~~~---~Gl~G~liV~~~~~~--~~~~~~d~e~~l~l 148 (178)
||||||||...+. +||+|+|||++++.. |.+..+|+|++|+|
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l 221 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMF 221 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEE
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEe
Confidence 9999999998775 399999999998433 23345678999999
No 32
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.96 E-value=7.9e-28 Score=215.71 Aligned_cols=168 Identities=15% Similarity=0.187 Sum_probs=112.4
Q ss_pred cCCceEEEEEEEEEEEEEec-------------C-ceeEE-EEEE----------------cCccCCceEEEecCCEEEE
Q 035484 6 SSQTIKSFLFNVEWKTVSRL-------------C-NTKLL-LLTV----------------NGEYSGLAIAVYEGDNVQI 54 (178)
Q Consensus 6 ~~~~~~~~~l~i~~~~~~~~-------------g-~~~~~-~~~~----------------Ng~~pgp~i~~~~Gd~v~v 54 (178)
..+++|+|-+-+++...... | ..+++ ...| +.++|||+|++++||+|+|
T Consensus 2 ~~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v 81 (647)
T 1sdd_B 2 NTGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQV 81 (647)
T ss_dssp CCCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEE
T ss_pred CCCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEE
Confidence 45788999999988776543 1 12222 1233 3368999999999999999
Q ss_pred EEEeCCCCCcceeecCccccCCCCCCCCCCcc--------ccccCCCCeEEEEEEeccc-----CC----ceEEeechhh
Q 035484 55 KVTNRVAQNTTIRWHGIRQLRTGWSDGPAYIT--------QCPIKGGQSYTYEFTIVNQ-----RG----TLLWHAHHSW 117 (178)
Q Consensus 55 ~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~--------~~~i~pg~~~~y~~~~~~~-----~G----t~~yH~h~~~ 117 (178)
+|+|.++++++|||||+.++. ++||+++++ ||+|+||++++|+|++.++ +| |||||||...
T Consensus 82 ~~~N~l~~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~ 159 (647)
T 1sdd_B 82 RFKNLASRPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNP 159 (647)
T ss_dssp EECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSH
T ss_pred EEEECCCCceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCC
Confidence 999999999999999999875 499999876 8999999999999998654 57 9999999964
Q ss_pred --Hhh-ccEEEEEEEcCCCC---C-CCCCCCceEEEEE-chhhh----hhh-c----c-c-CCCCCCCceEEECCCCC
Q 035484 118 --QRA-SVYGAFIIYPRMPY---P-FSAPIQAEIPIIF-DVNAV----END-M----K-Y-GGGPDSSDACTINGLPG 176 (178)
Q Consensus 118 --~~~-Gl~G~liV~~~~~~---~-~~~~~d~e~~l~l-d~~~~----~~~-~----~-~-~~~~~~~~~~liNG~~~ 176 (178)
+.. ||+|+|||+++... + .+. +++|++|+| |+++. ... . . . ......++.++|||+.+
T Consensus 160 ~~q~~~GL~G~lIV~~~~~~~~~~~~~~-~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~ 236 (647)
T 1sdd_B 160 EKDIHSGLIGPLLICRKGTLDKETNMPV-DMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIY 236 (647)
T ss_dssp HHHHTTTCEEEEEEECTTSSCTTSCCCS-SCCEEEEEEEEEEGGGSSCCC---------------CCCEEEEETTBSS
T ss_pred cccccccCccCEEEeeCCCcccccCCCC-cceeEEEEEEeecCccccccccCcccccccCCcchhhcCceeccCCEec
Confidence 444 99999999998321 1 122 348999999 43210 000 0 0 0 01124579999999975
No 33
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.94 E-value=5.7e-28 Score=219.38 Aligned_cols=128 Identities=16% Similarity=0.211 Sum_probs=100.1
Q ss_pred EEEEEEEEEEec-CceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCC--------
Q 035484 14 LFNVEWKTVSRL-CNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAY-------- 84 (178)
Q Consensus 14 ~l~i~~~~~~~~-g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~-------- 84 (178)
.+.++.+...+. +..+.. |+ ++|||+|++++||+|+|+|+|.++++++|||||+.++.. +||+++
T Consensus 50 ~l~~~~~~~~~~~~~~~~~-~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~~ 123 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPP-WM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQRE 123 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTT-TT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSSS
T ss_pred EEEEEecceEEECCccccc-cc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCcccc
Confidence 444444444443 444444 53 899999999999999999999999999999999998753 777665
Q ss_pred ccccccCCCCeEEEEEEecc---------cCCceEEeechhh--Hhh-ccEEEEEEEcCCCCCC--CCCCCceEEEEE
Q 035484 85 ITQCPIKGGQSYTYEFTIVN---------QRGTLLWHAHHSW--QRA-SVYGAFIIYPRMPYPF--SAPIQAEIPIIF 148 (178)
Q Consensus 85 ~~~~~i~pg~~~~y~~~~~~---------~~Gt~~yH~h~~~--~~~-Gl~G~liV~~~~~~~~--~~~~d~e~~l~l 148 (178)
++||+|+||++++|+|++.+ ++||||||||... |.. ||+|+|||+++..... .... +|++|++
T Consensus 124 vtq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~-~e~~l~~ 200 (742)
T 2r7e_A 124 KEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTL-HKFILLF 200 (742)
T ss_dssp SSSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCC-CEECCCE
T ss_pred cccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCcee-eEEEEEe
Confidence 78999999999999999853 4699999999876 344 9999999999833221 1223 8998887
No 34
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.94 E-value=1e-27 Score=218.31 Aligned_cols=142 Identities=11% Similarity=0.123 Sum_probs=112.2
Q ss_pred CcCCceEEEEEEEEEEEE--EecCc----------------eeEEEEEE-----cC-----------ccCCceEEEecCC
Q 035484 5 SSSQTIKSFLFNVEWKTV--SRLCN----------------TKLLLLTV-----NG-----------EYSGLAIAVYEGD 50 (178)
Q Consensus 5 ~~~~~~~~~~l~i~~~~~--~~~g~----------------~~~~~~~~-----Ng-----------~~pgp~i~~~~Gd 50 (178)
+..+.+|+|.|.+++... .+++. .+.+.+.| ++ ++|||+|++++||
T Consensus 128 ~~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD 207 (770)
T 2r7e_B 128 SFQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVED 207 (770)
T ss_dssp CCCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSS
T ss_pred cCCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCC
Confidence 356889999999999774 33321 12221333 22 5799999999999
Q ss_pred EEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecc---------cCCceEEeechhh--Hh
Q 035484 51 NVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVN---------QRGTLLWHAHHSW--QR 119 (178)
Q Consensus 51 ~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~---------~~Gt~~yH~h~~~--~~ 119 (178)
+|+|+|+|.++++++|||||+.++... .||+++ +||+|+||++++|+|++.+ ++||||||||... +.
T Consensus 208 ~v~v~~~N~l~~~~siH~HG~~~~~~~-~dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~ 285 (770)
T 2r7e_B 208 NIMVTFRNQASRPYSFYSSLISYEEDQ-RQGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDV 285 (770)
T ss_dssp CEEEEEECCSSSCCCCCBTTCCCCCCS-SSCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHH
T ss_pred EEEEEEEECCCCCcceeeccccccccc-CCCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHH
Confidence 999999999999999999999998874 259987 8999999999999999854 8999999999987 34
Q ss_pred h-ccEEEEEEEcCCCCCC---CCCCCceEEEEE
Q 035484 120 A-SVYGAFIIYPRMPYPF---SAPIQAEIPIIF 148 (178)
Q Consensus 120 ~-Gl~G~liV~~~~~~~~---~~~~d~e~~l~l 148 (178)
. ||+|+|||+++..... ...+|+|++|++
T Consensus 286 ~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~ 318 (770)
T 2r7e_B 286 HSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFF 318 (770)
T ss_dssp HTSCCEEEEEECSTTSCSSSCCCCSSEEEECCC
T ss_pred hCCceeeEEECCCcccccccCCCccceEEEEEE
Confidence 4 9999999999843211 123458999887
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.94 E-value=1.6e-25 Score=192.58 Aligned_cols=159 Identities=18% Similarity=0.249 Sum_probs=121.5
Q ss_pred CceEEEEEEEEEEEEEe-cCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCC--CCcceeecCccccCCCCCCCCCC
Q 035484 8 QTIKSFLFNVEWKTVSR-LCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVA--QNTTIRWHGIRQLRTGWSDGPAY 84 (178)
Q Consensus 8 ~~~~~~~l~i~~~~~~~-~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~--~~~~~H~HG~~~~~~~~~DG~~~ 84 (178)
+..+.++|+++.....+ +|..... |+|||++|||+|++++||+++++++|.++ ..+++||||+.. .||.+.
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~-~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~ 234 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTY-WTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAA 234 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEE-EEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEE-EEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCc
Confidence 45678888887776666 4667777 99999999999999999999999999985 689999999752 788875
Q ss_pred ccccccCCCCeEEEEEEecccCCceEEeechh---hHhh-ccEEEEEEEcCCCCCCCCCCCceEEEEE-chhhhhh--h-
Q 035484 85 ITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHS---WQRA-SVYGAFIIYPRMPYPFSAPIQAEIPIIF-DVNAVEN--D- 156 (178)
Q Consensus 85 ~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~---~~~~-Gl~G~liV~~~~~~~~~~~~d~e~~l~l-d~~~~~~--~- 156 (178)
.+ .|.||++++|.|++ +++|+||||||.. .+.. ||+|+++|+++++.| .+|+|+++++ ||+.... .
T Consensus 235 ~~--~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~P---~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 235 FT--QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGLP---QVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp GC--CBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCSC---CCSEEEEEEEEEECBSSCTTCC
T ss_pred cE--EeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCCC---CCCeeEEEEecccccCCccccc
Confidence 43 49999999999987 6899999999963 3444 999999999875433 3568888888 6643110 0
Q ss_pred --c--c-cCCCCCCCceEEECCCCCCC
Q 035484 157 --M--K-YGGGPDSSDACTINGLPGPL 178 (178)
Q Consensus 157 --~--~-~~~~~~~~~~~liNG~~~p~ 178 (178)
. . .......++.++|||+.+++
T Consensus 309 g~~~~~~~~~~~~~~~~~~iNG~~~~~ 335 (447)
T 2dv6_A 309 GEQEMDYEKLINEKPEYFLFNGSVGSL 335 (447)
T ss_dssp EECCBBHHHHHTTCCSEEEETTSTTCC
T ss_pred ccccCChHHhhccCCCEEEECCcccCC
Confidence 0 0 00011357899999998863
No 36
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.91 E-value=1.4e-25 Score=203.80 Aligned_cols=110 Identities=22% Similarity=0.308 Sum_probs=91.9
Q ss_pred ccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCC-----CCCCccccccCCCCeEEEEEEecccCC-----
Q 035484 38 EYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSD-----GPAYITQCPIKGGQSYTYEFTIVNQRG----- 107 (178)
Q Consensus 38 ~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~D-----G~~~~~~~~i~pg~~~~y~~~~~~~~G----- 107 (178)
.+|||+|++++||+|+|+|+|.++++++|||||+.+.. +|+| |++.++||+|.||++++|+|++.+++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~~-~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVR-PLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEEC-CTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccCC-cccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 57999999999999999999999999999999999854 4566 456678999999999999999866554
Q ss_pred ----ceEEeechhhHh--h-ccEEEEEEEcCC-C--CCCCCCCCceEEEEE
Q 035484 108 ----TLLWHAHHSWQR--A-SVYGAFIIYPRM-P--YPFSAPIQAEIPIIF 148 (178)
Q Consensus 108 ----t~~yH~h~~~~~--~-Gl~G~liV~~~~-~--~~~~~~~d~e~~l~l 148 (178)
|||||||...+. . ||+|+|||+++. . .+.+...|+|++|++
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~ 577 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILF 577 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEE
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEe
Confidence 999999997753 3 999999999872 2 222234568999998
No 37
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.80 E-value=5.1e-20 Score=172.88 Aligned_cols=116 Identities=15% Similarity=0.061 Sum_probs=99.4
Q ss_pred ceeEEEEEEcCccCC--ceEEEecCCEEEEEEEeCCCCCcceeecCccccC-CCCCCCCCCccccccCCCCeEEEEEEec
Q 035484 27 NTKLLLLTVNGEYSG--LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLR-TGWSDGPAYITQCPIKGGQSYTYEFTIV 103 (178)
Q Consensus 27 ~~~~~~~~~Ng~~pg--p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~-~~~~DG~~~~~~~~i~pg~~~~y~~~~~ 103 (178)
..+.+ .+|||++|| |.|++.+||+|+++|.|.. +.+||||+.+.. +.|+||++..+ |+|.||.+++|+|.+
T Consensus 616 ~~~~~-~~iNG~~~g~~P~l~~~~gd~v~~~v~~~g---~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~- 689 (1065)
T 2j5w_A 616 ESNKM-HSMNGFMYGNQPGLTMCKGDSVVWYLFSAG---NEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP- 689 (1065)
T ss_dssp HHTEE-EEETTBCTTCCCCCEEETTCCEEEEEECCC---STTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-
T ss_pred ccceE-EEEeeEecCCCCceEEeCCCEEEEEEEcCC---CcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-
Confidence 35678 999999999 8899999999999999774 459999999988 88899999888 999999999999986
Q ss_pred ccCCceEEeechhhHhh-ccEEEEEEEcCCCCCCC-CCCCceEEEEE
Q 035484 104 NQRGTLLWHAHHSWQRA-SVYGAFIIYPRMPYPFS-APIQAEIPIIF 148 (178)
Q Consensus 104 ~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~~~~~~-~~~d~e~~l~l 148 (178)
+++||||||||...|+. ||.|.++|++......+ ..+|.|.+++|
T Consensus 690 ~~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~i 736 (1065)
T 2j5w_A 690 DTEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYI 736 (1065)
T ss_dssp CSCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEE
T ss_pred CCCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEE
Confidence 79999999999999986 99999999987221111 35667777766
No 38
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.80 E-value=1.2e-19 Score=156.02 Aligned_cols=108 Identities=12% Similarity=0.145 Sum_probs=89.3
Q ss_pred CceEEEEEEEEEEEEEecCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccc
Q 035484 8 QTIKSFLFNVEWKTVSRLCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQ 87 (178)
Q Consensus 8 ~~~~~~~l~i~~~~~~~~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~ 87 (178)
+.++++.++++.+.+.++| .. .+|||++ +|+|++++||+|+|+|+|.+...|.+||||.... ++
T Consensus 26 ~~~~~~~~~~~~~~~~f~g---~~-~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~-----------~~ 89 (447)
T 2dv6_A 26 PVVFTLRTGIAEGRMVYIG---VG-GDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAAR-----------SA 89 (447)
T ss_dssp CEEEEEEEEEETTEEEEEE---ES-GGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTEE-----------CC
T ss_pred CceEEEEEEecccEEEEec---cc-eeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCcc-----------cc
Confidence 3445566665544444443 44 7899999 9999999999999999999998899999996531 46
Q ss_pred cccCCCCeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEcCC
Q 035484 88 CPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPRM 132 (178)
Q Consensus 88 ~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~ 132 (178)
|+|.||++++|.|++ .++|+||||||...|+. ||.|.|+|+++.
T Consensus 90 ~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~ 134 (447)
T 2dv6_A 90 IVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGN 134 (447)
T ss_dssp CBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSC
T ss_pred eecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCc
Confidence 899999999999987 67999999999988886 999999999873
No 39
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.78 E-value=8.4e-19 Score=142.42 Aligned_cols=97 Identities=20% Similarity=0.301 Sum_probs=83.6
Q ss_pred EEEcCcc--CCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCC--------CccccccCCCCeEEEEEEe
Q 035484 33 LTVNGEY--SGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPA--------YITQCPIKGGQSYTYEFTI 102 (178)
Q Consensus 33 ~~~Ng~~--pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~--------~~~~~~i~pg~~~~y~~~~ 102 (178)
|+|||+. ++|.|++++||+|+++|.|...+.|++|+||..+... .+|.. ...+..|.||+++++.|..
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 7999997 7899999999999999999999999999999888654 45531 1234579999999999976
Q ss_pred cc--cCCceEEeechhhHhh-ccEEEEEEEcC
Q 035484 103 VN--QRGTLLWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 103 ~~--~~Gt~~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
.+ .+|+||||||...|.. ||+|.++|+++
T Consensus 235 ~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~ 266 (276)
T 3kw8_A 235 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKP 266 (276)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECT
T ss_pred ccCCCCCeEEEECCCchHhhCCCeEEEEEeCC
Confidence 32 6999999999999886 99999999998
No 40
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.72 E-value=2.2e-18 Score=120.14 Aligned_cols=88 Identities=18% Similarity=0.221 Sum_probs=69.1
Q ss_pred ccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCC--CCCCCCCCccccccCCCCeEEEEEEecccCCceEEeech
Q 035484 38 EYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRT--GWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHH 115 (178)
Q Consensus 38 ~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~--~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~ 115 (178)
+|++|.|++++||+|+ |+|.++.+|++||||..++.. ...|+.+ .++..+.||++++|.|++++++|+||||||
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~- 90 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA- 90 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT-
T ss_pred EEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC-
Confidence 5778999999999985 579999999999999876531 0012221 245689999999999975468999999999
Q ss_pred hhHhh-ccEEEEEEEc
Q 035484 116 SWQRA-SVYGAFIIYP 130 (178)
Q Consensus 116 ~~~~~-Gl~G~liV~~ 130 (178)
.|.. ||.|.|+|++
T Consensus 91 -~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 -PHRGAGMVGKITVEG 105 (105)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -CchhcCCEEEEEEcC
Confidence 4555 9999999974
No 41
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.66 E-value=4.2e-16 Score=130.22 Aligned_cols=98 Identities=19% Similarity=0.272 Sum_probs=82.4
Q ss_pred EEEcCcc--CCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCC---C-----ccccccCCCCeEEEEEEe
Q 035484 33 LTVNGEY--SGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPA---Y-----ITQCPIKGGQSYTYEFTI 102 (178)
Q Consensus 33 ~~~Ng~~--pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~---~-----~~~~~i~pg~~~~y~~~~ 102 (178)
|+|||+. ..|.|++++|++|+|++.|.....|++|+||..+... .+|.. . .....|.||+++++.|+.
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 3689999999999999999999999999999987653 34421 1 134579999999999985
Q ss_pred --cccCCceEEeechhhHhh-ccEEEEEEEcCC
Q 035484 103 --VNQRGTLLWHAHHSWQRA-SVYGAFIIYPRM 132 (178)
Q Consensus 103 --~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~ 132 (178)
++.+|+|+||||...|.. ||+|.++|.+++
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 308 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCC
Confidence 368999999999998887 999999999873
No 42
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.62 E-value=3.4e-15 Score=105.38 Aligned_cols=106 Identities=19% Similarity=0.155 Sum_probs=78.8
Q ss_pred EEEEEEEEEEEEE-----ecCceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCc
Q 035484 11 KSFLFNVEWKTVS-----RLCNTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYI 85 (178)
Q Consensus 11 ~~~~l~i~~~~~~-----~~g~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~ 85 (178)
+.|.+.+.+.... ..+.......++|.+++.+.|++++|++|+++++|.... +|+...+.. |.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~~----~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDAF----GV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGGG----TE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcCC----Cc---
Confidence 4566666664432 234444441388888999999999999999999999876 455443321 21
Q ss_pred cccccCCCCeEEEEEEecccCCceEEeechhhHhhccEEEEEEEc
Q 035484 86 TQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRASVYGAFIIYP 130 (178)
Q Consensus 86 ~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~Gl~G~liV~~ 130 (178)
+..+.||+++++.|++ +++|+|+||||...+..+|.|.++|++
T Consensus 70 -~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 -QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp -EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred -eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 3578999999999986 899999999998766556999999974
No 43
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.56 E-value=6.7e-15 Score=127.92 Aligned_cols=96 Identities=13% Similarity=0.181 Sum_probs=81.2
Q ss_pred EEEcCccCC---ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCC--CCCCC-------ccccccCCCCeEEEEE
Q 035484 33 LTVNGEYSG---LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWS--DGPAY-------ITQCPIKGGQSYTYEF 100 (178)
Q Consensus 33 ~~~Ng~~pg---p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~--DG~~~-------~~~~~i~pg~~~~y~~ 100 (178)
|+|||+..+ |.+++++|+++++++.|.....|++|+||..|.... . +|.+. -....|.||++.+..|
T Consensus 373 ~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~-~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~ 451 (481)
T 3zx1_A 373 FLINRKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELIS-SKLNGKVQKAEFRALRDTINVRPNEELRLRM 451 (481)
T ss_dssp EEETTBCCCTTCCCEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEE-EEETTEEEECSSCCEESEEEECTTCEEEEEE
T ss_pred eEECCEeCCCCCceEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEE-ecccCCCCCcccCcccceEEECCCCEEEEEE
Confidence 999999776 789999999999999999999999999999886532 2 44210 1123689999999999
Q ss_pred EecccCCceEEeechhhHhh-ccEEEEEEEc
Q 035484 101 TIVNQRGTLLWHAHHSWQRA-SVYGAFIIYP 130 (178)
Q Consensus 101 ~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~ 130 (178)
.+ +.+|.|.||||...|.+ ||++.+.|++
T Consensus 452 ~~-d~pG~w~~HCHil~H~d~GMm~~~~V~~ 481 (481)
T 3zx1_A 452 KQ-DFKGLRMYHCHILEHEDLGMMGNLEVKE 481 (481)
T ss_dssp CC-CSCEEEEEEESSHHHHHTTCEEEEEEEC
T ss_pred Ec-CCCeeEEEEcCChHHHhcCCceEEEEeC
Confidence 86 89999999999999997 9999999974
No 44
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.55 E-value=1.6e-14 Score=107.93 Aligned_cols=91 Identities=12% Similarity=0.181 Sum_probs=64.6
Q ss_pred EEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCC----cc----ccccCCCC--eEEEEEEe
Q 035484 33 LTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAY----IT----QCPIKGGQ--SYTYEFTI 102 (178)
Q Consensus 33 ~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~----~~----~~~i~pg~--~~~y~~~~ 102 (178)
+.++|. ++|.|++++||+|+|+++|... ...|.+.+......+.+ .+. +. ...|.||+ +.+|.|++
T Consensus 53 ~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~ 128 (154)
T 2cal_A 53 FEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAV-MPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP 128 (154)
T ss_dssp EEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCS-SCCCCSEEEEBCCCCCCBTTBEEEEEEEECC
T ss_pred ccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhc-cccccccccccccccccCCCCceEEEEEEEE
Confidence 445554 6799999999999999999742 23455444433222211 010 00 12689999 99999974
Q ss_pred cccCCceEEeechhhHhh-ccEEEEEEE
Q 035484 103 VNQRGTLLWHAHHSWQRA-SVYGAFIIY 129 (178)
Q Consensus 103 ~~~~Gt~~yH~h~~~~~~-Gl~G~liV~ 129 (178)
++|+||||||..+|.. ||.|.|+|+
T Consensus 129 --~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 129 --TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp --CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred --CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9999999999988886 999999985
No 45
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.51 E-value=1.1e-13 Score=113.38 Aligned_cols=99 Identities=16% Similarity=0.220 Sum_probs=79.3
Q ss_pred EEEcCccCC--ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCC-------ccccccCCCCeEEEEEEe-
Q 035484 33 LTVNGEYSG--LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAY-------ITQCPIKGGQSYTYEFTI- 102 (178)
Q Consensus 33 ~~~Ng~~pg--p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~-------~~~~~i~pg~~~~y~~~~- 102 (178)
|.+||+..+ |.+.++.||+|++++.|..+..+++|+||..+.... .++... .....|.||+++++.+..
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~~-~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHGSNFHTFHLHGHRWLDNR-TGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEESSCCCEEEETTCCEESSS-SSSCCSTTCCCCEESEEECCTTCEEEEEEETT
T ss_pred eeecCccccccccceecCCCEEEEEEEeccccceeeeEecceEEEEe-cccccCCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 578887543 899999999999999999999999999998876532 232211 123468999999988853
Q ss_pred -cccCCceEEeechhhHhh-ccEEEEEEEcCC
Q 035484 103 -VNQRGTLLWHAHHSWQRA-SVYGAFIIYPRM 132 (178)
Q Consensus 103 -~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~ 132 (178)
.+.+|+|+||||...+.. ||.|.+.|++.+
T Consensus 258 ~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 258 EGVGPGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred eCCCCeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 246899999999999987 999999999883
No 46
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.51 E-value=7.8e-14 Score=113.70 Aligned_cols=117 Identities=16% Similarity=0.158 Sum_probs=89.8
Q ss_pred ceEEEEEEEEEEEEEecCceeEEEEEEcCccCC---ceEEEecCCEEEEEEEeCCCC--CcceeecCccccCCCCCCCCC
Q 035484 9 TIKSFLFNVEWKTVSRLCNTKLLLLTVNGEYSG---LAIAVYEGDNVQIKVTNRVAQ--NTTIRWHGIRQLRTGWSDGPA 83 (178)
Q Consensus 9 ~~~~~~l~i~~~~~~~~g~~~~~~~~~Ng~~pg---p~i~~~~Gd~v~v~~~N~~~~--~~~~H~HG~~~~~~~~~DG~~ 83 (178)
..+++.|.+..-... +|..... |+|||+..+ +.|.++.|+++++++.|.... .|++|+||..+... .+|..
T Consensus 161 ~d~e~~l~~~d~~~~-~g~~~~~-~~iNG~~~~~~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~--~~g~~ 236 (288)
T 3gdc_A 161 ADDEMVMVMNGYNTD-GGDDNEF-YSVNGLPFHFMDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYY--PTGTM 236 (288)
T ss_dssp CSEEEEEEEEEECCS-STTCCSE-EEETTSTTHHHHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEE--ETTCC
T ss_pred CcceEEEEEeeEecC-CCCCcce-EEECcccccccCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEE--cCCCc
Confidence 346777666653322 4444566 999998643 579999999999999999864 59999999988653 34432
Q ss_pred C-----ccccccCCCCeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEc
Q 035484 84 Y-----ITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYP 130 (178)
Q Consensus 84 ~-----~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~ 130 (178)
. .....|.||++.+..|.. +++|+|.||||...|.. ||.|.+.|.+
T Consensus 237 ~~~~~~~Dtv~v~pg~~~~v~~~~-~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 237 LTPSEYTDTISQVQGQRGILELRF-PYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp SSCSEEESEEEEETTCEEEEEECC-CSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred cCCCceeeEEEeCCCceEEEEEEC-CCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 1 123368999999999976 79999999999999987 9999999863
No 47
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.50 E-value=7.3e-14 Score=123.61 Aligned_cols=90 Identities=18% Similarity=0.217 Sum_probs=72.1
Q ss_pred ceeEEEEEEcCccCCceEEEecCCEEEEEEEeCCCC---CcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEec
Q 035484 27 NTKLLLLTVNGEYSGLAIAVYEGDNVQIKVTNRVAQ---NTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIV 103 (178)
Q Consensus 27 ~~~~~~~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~---~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~ 103 (178)
....+ |++|++|++|.|++++||+|++.++|.+.. .|.++.++. |+ ...+.||++.+|.|++
T Consensus 499 v~V~m-~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~---------gv----~~~i~PG~t~t~~Fta- 563 (595)
T 1fwx_A 499 VRVYM-SSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNY---------GV----AMEIGPQMTSSVTFVA- 563 (595)
T ss_dssp EEEEE-EEETTEESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------TE----EEEECTTCEEEEEEEC-
T ss_pred cceeE-EEecCcccCCEEEEECCCEEEEEEEeCCCCCCceeeEEecCC---------Cc----ceeeCCCCeEEEEEEC-
Confidence 55677 999999999999999999999999998654 444444332 21 2478999999999986
Q ss_pred ccCCceEEeech-hhHh-hccEEEEEEEcC
Q 035484 104 NQRGTLLWHAHH-SWQR-ASVYGAFIIYPR 131 (178)
Q Consensus 104 ~~~Gt~~yH~h~-~~~~-~Gl~G~liV~~~ 131 (178)
+++|+||||||. ++.. .||.|.++|+++
T Consensus 564 ~~pGtY~yhC~e~Cg~~H~gM~G~IiV~p~ 593 (595)
T 1fwx_A 564 ANPGVYWYYCQWFCHALHMEMRGRMLVEPK 593 (595)
T ss_dssp CSCEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred CCCEEEEEECCCCCCCCccCCEEEEEEEcC
Confidence 899999999993 3222 299999999976
No 48
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.48 E-value=1.2e-13 Score=122.99 Aligned_cols=103 Identities=16% Similarity=0.153 Sum_probs=82.3
Q ss_pred eeEEEEEEcCcc--CCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCC-----------CCC------------C
Q 035484 28 TKLLLLTVNGEY--SGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGW-----------SDG------------P 82 (178)
Q Consensus 28 ~~~~~~~~Ng~~--pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~-----------~DG------------~ 82 (178)
.... |+|||+. ..+.+++++|+++++++.|.....|+||+||..|..... .+| .
T Consensus 457 ~~~~-~~iNG~~~~~~~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~ 535 (612)
T 2g23_A 457 RTKT-YRRTAATFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPV 535 (612)
T ss_dssp CEEE-EEEEECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEEC
T ss_pred ceeE-EEECCccCCCCCceEecCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCccccccccccccc
Confidence 3456 9999974 358999999999999999999999999999998865210 011 0
Q ss_pred C-------CccccccCCCCeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEcC
Q 035484 83 A-------YITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 83 ~-------~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
+ .-....|.||++.+++|.....+|.|.||||...|.+ ||++.+.|.++
T Consensus 536 ~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~ 592 (612)
T 2g23_A 536 PLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPP 592 (612)
T ss_dssp CCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECH
T ss_pred CCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECch
Confidence 0 0112358899999999987439999999999999997 99999999987
No 49
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.48 E-value=3.3e-13 Score=111.20 Aligned_cols=99 Identities=17% Similarity=0.222 Sum_probs=80.2
Q ss_pred EEEcCccC--CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCC-------ccccccCCCCeEEEEEEe-
Q 035484 33 LTVNGEYS--GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAY-------ITQCPIKGGQSYTYEFTI- 102 (178)
Q Consensus 33 ~~~Ng~~p--gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~-------~~~~~i~pg~~~~y~~~~- 102 (178)
|++||+.. .|.+.++.|++|++++.|..+..+++|+||..+.... .||... .....|.||+++++.+..
T Consensus 163 ~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v~~-~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~ 241 (313)
T 3tas_A 163 MTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWADNR-TGMLTGPDDPSQVIDNKICGPADSFGFQVIAG 241 (313)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESST-TSSCCSTTCCCCEESEEEECTTCEEEEEEETT
T ss_pred hhcccCCcccccccccccCCEEEEEEecccccceeeeecCCeeEEEE-ECCccCCCCCCeeeeEEEeCCCcceEEEEEec
Confidence 57888643 4899999999999999999999999999999886542 454322 123468999999998854
Q ss_pred -cccCCceEEeechhhHhh-ccEEEEEEEcCC
Q 035484 103 -VNQRGTLLWHAHHSWQRA-SVYGAFIIYPRM 132 (178)
Q Consensus 103 -~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~ 132 (178)
.+.+|+|+||||...|.. ||.|.|+|++.+
T Consensus 242 ~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d 273 (313)
T 3tas_A 242 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 273 (313)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred cCCCCEeEEEEeCChHHHHCCCeEEEEEECCC
Confidence 246899999999998886 999999999873
No 50
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.42 E-value=5.9e-13 Score=119.26 Aligned_cols=99 Identities=19% Similarity=0.277 Sum_probs=83.7
Q ss_pred eEEEEEEcCcc-CCceEEEecCCEEEEEEEeCCC--CCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEeccc
Q 035484 29 KLLLLTVNGEY-SGLAIAVYEGDNVQIKVTNRVA--QNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQ 105 (178)
Q Consensus 29 ~~~~~~~Ng~~-pgp~i~~~~Gd~v~v~~~N~~~--~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~ 105 (178)
... ++|||+. +.|.|+++.|++++++|.|... ..|++|+||..+.... .||. ......|.||+++++.|.+ ++
T Consensus 226 ~~~-~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~-~d~~-~~d~v~l~pg~r~~v~~~~-~~ 301 (647)
T 1sdd_B 226 HEF-HAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENG-TQQH-QLGVWPLLPGSFKTLEMKA-SK 301 (647)
T ss_dssp CEE-EEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECS-SSCE-EESSEEECTTEEEEEEEEC-CS
T ss_pred Cce-eccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEec-CCCc-ccceEEECCCeEEEEEEEe-cc
Confidence 455 8999987 5799999999999999999985 4899999999886542 4543 2345578999999999986 77
Q ss_pred CCceEEeechhhHhh-ccEEEEEEEcC
Q 035484 106 RGTLLWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 106 ~Gt~~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
+|+|+||||...|.. ||.+.++|.++
T Consensus 302 pG~w~~hch~~~h~~~Gm~~~~~V~~~ 328 (647)
T 1sdd_B 302 PGWWLLDTEVGEIQRAGMQTPFLIVDR 328 (647)
T ss_dssp SEEEEEECCCHHHHTTTCEEEEEEECT
T ss_pred ceEeecccCcccccccccccceeeecc
Confidence 899999999998886 99999999875
No 51
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.40 E-value=1.2e-12 Score=112.31 Aligned_cols=95 Identities=13% Similarity=0.144 Sum_probs=78.1
Q ss_pred EEEEEcCccC---CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCC----C-ccccccCCCCeEEEEEEe
Q 035484 31 LLLTVNGEYS---GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPA----Y-ITQCPIKGGQSYTYEFTI 102 (178)
Q Consensus 31 ~~~~~Ng~~p---gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~----~-~~~~~i~pg~~~~y~~~~ 102 (178)
. |+|||+.. .+.+.++.|+++++.+.|....+|++|+||..|.... .+|.+ . -....|+||++.+.+|.
T Consensus 335 ~-~~iNg~~~~~~~~~~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~-~~g~~~~~p~~rDTv~v~p~~~v~i~f~- 411 (439)
T 2xu9_A 335 R-FFINGQVFDHRRVDLKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLS-VGGRPFPYRAWKDVVNLKAGEVARLLVP- 411 (439)
T ss_dssp E-EEETTBCCCTTCCCEEECTTCEEEEEEEECSSSCEEEEESSCCBEEEE-ETTEECSSCCCBSEEEECTTCEEEEEEE-
T ss_pred e-EeECCEECCCCCCceecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEe-eCCCCCCCCCCeEEEEeCCCCEEEEEEE-
Confidence 5 99999743 3569999999999999999999999999999986542 23321 1 11236889999999998
Q ss_pred cccCCceEEeechhhHhh-ccEEEEEE
Q 035484 103 VNQRGTLLWHAHHSWQRA-SVYGAFII 128 (178)
Q Consensus 103 ~~~~Gt~~yH~h~~~~~~-Gl~G~liV 128 (178)
++.+|.|.||||...|.+ ||++.+.|
T Consensus 412 adnpG~w~~HCHil~H~~~GMm~~~~V 438 (439)
T 2xu9_A 412 LREKGRTVFHCHIVEHEDRGMMGVLEV 438 (439)
T ss_dssp CCSCEEEEEEESSHHHHHTTCEEEEEE
T ss_pred cCCCCCEEEECCcchhhhcCCcEEEEe
Confidence 599999999999999997 99999987
No 52
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.39 E-value=1.4e-12 Score=114.12 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=78.2
Q ss_pred EEEEEEcCccC-C-ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCC---------------CCCC--------C
Q 035484 30 LLLLTVNGEYS-G-LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWS---------------DGPA--------Y 84 (178)
Q Consensus 30 ~~~~~~Ng~~p-g-p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~---------------DG~~--------~ 84 (178)
.. |.|||+.. . +.+.++.|+++++.+.|....+|++|+||..|...... .|.+ +
T Consensus 384 ~~-~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
T 2wsd_A 384 PV-LLLNNKRWHDPVTETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKG 462 (513)
T ss_dssp EE-EEETTBCTTSCCCBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSS
T ss_pred ce-EeECCccCCCcccEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccC
Confidence 45 88999753 4 45789999999999999999999999999987643211 0111 0
Q ss_pred -ccccccCCCCeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEcC
Q 035484 85 -ITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 85 -~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
-....|.||++.++.+...+.+|.|.||||...|.. ||++.+.|.++
T Consensus 463 ~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 463 WKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp CBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred cccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCC
Confidence 112357899988877765568999999999999997 99999999875
No 53
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.38 E-value=1.4e-14 Score=119.02 Aligned_cols=96 Identities=18% Similarity=0.165 Sum_probs=64.8
Q ss_pred eEEEEEEcCccCC--ceEEEecCCEEEEEEEeCCCC--CcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecc
Q 035484 29 KLLLLTVNGEYSG--LAIAVYEGDNVQIKVTNRVAQ--NTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVN 104 (178)
Q Consensus 29 ~~~~~~~Ng~~pg--p~i~~~~Gd~v~v~~~N~~~~--~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~ 104 (178)
..+ ++|||+..+ |.|+++.|+++++++.|.... .+++|+||..+. .||.. .....|.||+++++.|++ +
T Consensus 201 ~~~-~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~----~dG~~-~dtv~l~pger~~v~~~~-~ 273 (306)
T 1sdd_A 201 SLM-YTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE----QNHHK-ISAITLVSATSTTANMTV-S 273 (306)
T ss_dssp CEE-ECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCE----ETTEE-CSCCCEETTCCBC-------
T ss_pred Ccc-eeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEee----eCCEE-cceEEECCCcEEEEEEEc-C
Confidence 456 999999865 899999999999999999874 688999998764 46642 345578999999999986 7
Q ss_pred cCCceEEeechhhHhh-ccEEEEEEEcC
Q 035484 105 QRGTLLWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 105 ~~Gt~~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
++|+|+||||...|.. ||.|.+.|++.
T Consensus 274 ~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 274 PEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp --CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred CCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 8999999999998886 99999999875
No 54
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.38 E-value=1.8e-12 Score=90.51 Aligned_cols=78 Identities=23% Similarity=0.275 Sum_probs=61.9
Q ss_pred CccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechh
Q 035484 37 GEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHS 116 (178)
Q Consensus 37 g~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~ 116 (178)
..|..+.|++++||+|++ +|..+.+|++|+++. .||.....+..+.||++++|.| +++|+|||||+.+
T Consensus 28 ~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H 95 (105)
T 2ov0_A 28 MKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPH 95 (105)
T ss_dssp TEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSC
T ss_pred cEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCCC
Confidence 456678999999999765 699988999999852 3454434445689999999887 5899999999874
Q ss_pred hHhhccEEEEEEE
Q 035484 117 WQRASVYGAFIIY 129 (178)
Q Consensus 117 ~~~~Gl~G~liV~ 129 (178)
. ||.|.|+|+
T Consensus 96 ~---gM~G~i~V~ 105 (105)
T 2ov0_A 96 P---FMRGKVVVE 105 (105)
T ss_dssp T---TCEEEEEEC
T ss_pred C---CCEEEEEEC
Confidence 3 999999984
No 55
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.37 E-value=1.1e-12 Score=114.18 Aligned_cols=94 Identities=12% Similarity=0.102 Sum_probs=75.1
Q ss_pred EEEcCccC---CceEEEecCCEEEEEEEeCC-CCCcceeecCccccCCCCCCCCCCc-------cccccCCCCeEEEEEE
Q 035484 33 LTVNGEYS---GLAIAVYEGDNVQIKVTNRV-AQNTTIRWHGIRQLRTGWSDGPAYI-------TQCPIKGGQSYTYEFT 101 (178)
Q Consensus 33 ~~~Ng~~p---gp~i~~~~Gd~v~v~~~N~~-~~~~~~H~HG~~~~~~~~~DG~~~~-------~~~~i~pg~~~~y~~~ 101 (178)
|+|||+.. .|.+++++|++++++++|.. ..+|++|+||..|.... .+|.+.. ....|. |++.+..+.
T Consensus 380 ~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~-~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~ 457 (488)
T 3od3_A 380 NKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILS-ENGKPPAAHRAGWKDTVKVE-GNVSEVLVK 457 (488)
T ss_dssp EEETTBCCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEE-BTTBCCCGGGSSSBSEEEES-SSEEEEEEC
T ss_pred eeECCeeCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEec-cCCCccccccCCceeEEEeC-CCEEEEEEE
Confidence 89999853 47799999999999999998 57999999999987643 4553311 122466 999999887
Q ss_pred ec---ccCCceEEeechhhHhh-ccEEEEEE
Q 035484 102 IV---NQRGTLLWHAHHSWQRA-SVYGAFII 128 (178)
Q Consensus 102 ~~---~~~Gt~~yH~h~~~~~~-Gl~G~liV 128 (178)
.. +.+|.|.||||...|.+ ||++.+.|
T Consensus 458 f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 458 FNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp BCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred eccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 62 34689999999999997 99999976
No 56
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.34 E-value=3.9e-12 Score=105.06 Aligned_cols=99 Identities=17% Similarity=0.192 Sum_probs=81.3
Q ss_pred EEEEEEcCcc-CC-ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCC-----ccccccCCCCeEEEEEEe
Q 035484 30 LLLLTVNGEY-SG-LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAY-----ITQCPIKGGQSYTYEFTI 102 (178)
Q Consensus 30 ~~~~~~Ng~~-pg-p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~-----~~~~~i~pg~~~~y~~~~ 102 (178)
.. |+|||+. |. +.++++.|+++++++.|.....+.+|+||..+.... .||.+. .....|.||++++..|.+
T Consensus 165 d~-~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~-~dG~~~~~p~~~dtv~l~pger~~v~~~a 242 (318)
T 3g5w_A 165 DY-YTINAKSFPETQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAF-KDGFPLDKPIKGDTVLIGPGERYDVILNM 242 (318)
T ss_dssp CE-EEETTBCBTSSCCEEECTTCEEEEEEEECSSSCEEEEETTSCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cE-EEEcCcCCCCCccEEeCCCCEEEEEEEeCCCceEEEEECCcEEEEEe-cCCcccCCCccccEEEECCCCEEEEEEEC
Confidence 45 9999985 33 569999999999999999999999999999887653 687542 123468999999999986
Q ss_pred cccCCceEEeechhhHhh-------ccEEEEEEEcC
Q 035484 103 VNQRGTLLWHAHHSWQRA-------SVYGAFIIYPR 131 (178)
Q Consensus 103 ~~~~Gt~~yH~h~~~~~~-------Gl~G~liV~~~ 131 (178)
+++|.|++|||...|.. ||++.+.++..
T Consensus 243 -~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 243 -DNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp -CSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred -CCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 78999999999987762 78888888765
No 57
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.34 E-value=3.5e-12 Score=88.66 Aligned_cols=83 Identities=14% Similarity=0.169 Sum_probs=62.1
Q ss_pred CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCC----CccccccCCCCeEEEEEEecccCCceEEeechh
Q 035484 41 GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPA----YITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHS 116 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~----~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~ 116 (178)
-+.|++++||+|++ +|....+|.+|+|+...+. .+|.. ......+.||+++++.|+.++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 46899999999765 5888889999999865432 12210 0112368899999999864368999999999
Q ss_pred hHhh-ccEEEEEEEc
Q 035484 117 WQRA-SVYGAFIIYP 130 (178)
Q Consensus 117 ~~~~-Gl~G~liV~~ 130 (178)
.|.. ||.|.|+|++
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 5665 9999999964
No 58
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.34 E-value=6.1e-12 Score=91.91 Aligned_cols=91 Identities=14% Similarity=0.192 Sum_probs=67.7
Q ss_pred ccCCceEEEecCCEEEEEEEeCCCC-CcceeecCccccC--------------CCC-CCCCCC--ccccccCCCCeEEEE
Q 035484 38 EYSGLAIAVYEGDNVQIKVTNRVAQ-NTTIRWHGIRQLR--------------TGW-SDGPAY--ITQCPIKGGQSYTYE 99 (178)
Q Consensus 38 ~~pgp~i~~~~Gd~v~v~~~N~~~~-~~~~H~HG~~~~~--------------~~~-~DG~~~--~~~~~i~pg~~~~y~ 99 (178)
+|--+.|++++||+|+|+|+|.... +|.+++++..... ..+ .++.+. .....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 3445789999999999999999888 8999998753200 000 001000 012358999999999
Q ss_pred EEecccCCceEEeechhhHhhccEEEEEEE
Q 035484 100 FTIVNQRGTLLWHAHHSWQRASVYGAFIIY 129 (178)
Q Consensus 100 ~~~~~~~Gt~~yH~h~~~~~~Gl~G~liV~ 129 (178)
|++ +++|+|+||||...|..||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 986 68999999999887766999999984
No 59
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.33 E-value=7e-12 Score=109.37 Aligned_cols=88 Identities=15% Similarity=0.177 Sum_probs=71.6
Q ss_pred ceEEEecCCEEEEEEEe-CCCCCcceeecCccccCCCCCCCCC-------Cc-ccccc-CCCCeEEEEEEecccCCceEE
Q 035484 42 LAIAVYEGDNVQIKVTN-RVAQNTTIRWHGIRQLRTGWSDGPA-------YI-TQCPI-KGGQSYTYEFTIVNQRGTLLW 111 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N-~~~~~~~~H~HG~~~~~~~~~DG~~-------~~-~~~~i-~pg~~~~y~~~~~~~~Gt~~y 111 (178)
++++++.|+++++.+.| ....+|++|+||..|.... .+|.+ .. ....| +||++...+|.+ +.+|.|.|
T Consensus 373 ~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~-~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~a-dnPG~W~~ 450 (503)
T 1hfu_A 373 SVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVR-SAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVT-DNPGPWFF 450 (503)
T ss_dssp SEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEE-CTTCCCCCCSSBCEESEEECCSTTCEEEEEEEC-CSCEEEEE
T ss_pred eEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEe-cCCCCccccCCCCeeeeEEecCCCceEEEEEEc-CCCeeeeE
Confidence 46899999999999995 5578999999999987643 33322 10 12357 799999999985 89999999
Q ss_pred eechhhHhh-ccEEEEEEEcC
Q 035484 112 HAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 112 H~h~~~~~~-Gl~G~liV~~~ 131 (178)
|||...|.. ||++.++|.++
T Consensus 451 HCHil~H~~~GM~~~~~v~~~ 471 (503)
T 1hfu_A 451 HCHIEFHLMNGLAIVFAEDMA 471 (503)
T ss_dssp EESSHHHHHTTCEEEEEECHH
T ss_pred ecCchhHhhCCCeEEEEECch
Confidence 999999987 99999999876
No 60
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.32 E-value=3.8e-12 Score=112.78 Aligned_cols=101 Identities=16% Similarity=0.139 Sum_probs=79.2
Q ss_pred eEEEEEEcCccC--CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCC------------------------
Q 035484 29 KLLLLTVNGEYS--GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGP------------------------ 82 (178)
Q Consensus 29 ~~~~~~~Ng~~p--gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~------------------------ 82 (178)
... |.+|++.. ...+.++.|+.+++.+.|....+|++|+||..|.... .+|.
T Consensus 458 ~~~-~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (612)
T 3gyr_A 458 TKT-YRRTARTFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLG-RDAYDASGFDLALGGTRTPVRLDPDTPV 535 (612)
T ss_dssp EEE-EEEEECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEE-EEEEECTTEETTTTEESSCEEEEEEEEC
T ss_pred ccc-ccccCccCCCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEe-ecCCcCcccccccccccccccccccccc
Confidence 344 78888654 3688999999999999999999999999999886421 0000
Q ss_pred ------CC-ccccccCCCCeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEcC
Q 035484 83 ------AY-ITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 83 ------~~-~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
++ -....|.||+..+.+|+.++.+|.|+||||...|.+ ||++.+.|-++
T Consensus 536 ~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p 592 (612)
T 3gyr_A 536 PLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPP 592 (612)
T ss_dssp CCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECH
T ss_pred CcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCC
Confidence 00 012257889988888876689999999999999997 99999999877
No 61
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.31 E-value=5.8e-12 Score=110.36 Aligned_cols=86 Identities=19% Similarity=0.320 Sum_probs=71.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCC-------Cc-ccccc-CCCCeEEEEEEecccCCceEEe
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPA-------YI-TQCPI-KGGQSYTYEFTIVNQRGTLLWH 112 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~-------~~-~~~~i-~pg~~~~y~~~~~~~~Gt~~yH 112 (178)
++++++.|++++|.+.| ..+|++|+||..|.... .+|.+ .. ....| +||++...+|.+ +.+|.|.||
T Consensus 397 ~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~-~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~a-DNPG~W~~H 472 (521)
T 1v10_A 397 AVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVR-TPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVT-DNPGPWFLH 472 (521)
T ss_dssp TEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEE-CTTCSCCCCSSCCEESEEECCBSSCEEEEEEEC-CSCEEEEEE
T ss_pred eEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEe-cCCCCccccCCCCeeeeEEeCCCCcEEEEEEEe-CCCeeEEEe
Confidence 56899999999999999 78999999999987653 33322 10 12357 799999999985 899999999
Q ss_pred echhhHhh-ccEEEEEEEcC
Q 035484 113 AHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 113 ~h~~~~~~-Gl~G~liV~~~ 131 (178)
||...|.. ||++.++|.++
T Consensus 473 CHi~~H~~~GM~~~~~v~~~ 492 (521)
T 1v10_A 473 CHIDWHLEAGLAVVFAEDIP 492 (521)
T ss_dssp ESCHHHHTTTCEEEEEESGG
T ss_pred eChHHHHhCCCeEEEEECCc
Confidence 99999987 99999999876
No 62
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.29 E-value=5.7e-12 Score=110.76 Aligned_cols=100 Identities=15% Similarity=0.081 Sum_probs=78.8
Q ss_pred EEEcCccC----Cc-eEEEecCCEEEEEEEeCCC-CCcceeecCccccCCCCCCCC---C-------CccccccCCCCeE
Q 035484 33 LTVNGEYS----GL-AIAVYEGDNVQIKVTNRVA-QNTTIRWHGIRQLRTGWSDGP---A-------YITQCPIKGGQSY 96 (178)
Q Consensus 33 ~~~Ng~~p----gp-~i~~~~Gd~v~v~~~N~~~-~~~~~H~HG~~~~~~~~~DG~---~-------~~~~~~i~pg~~~ 96 (178)
|+|||+.. .| .+.++.|+.+++.+.|... .+|++|+||..|......+|. + .-....|.||++.
T Consensus 361 w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v 440 (534)
T 3abg_A 361 WTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETV 440 (534)
T ss_dssp TCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEE
T ss_pred eEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEE
Confidence 88999743 23 4689999999999999875 599999999988764322342 0 0112357899999
Q ss_pred EEEEEecccCCceEEeechhhHhh-ccEEEEEEEcCC
Q 035484 97 TYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPRM 132 (178)
Q Consensus 97 ~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~~ 132 (178)
+.+|..++.+|.|.||||...|.. ||++.+.|.+.+
T Consensus 441 ~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 441 VVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp EEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 999974589999999999999997 999999998774
No 63
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.29 E-value=2.8e-11 Score=106.35 Aligned_cols=89 Identities=12% Similarity=0.223 Sum_probs=71.8
Q ss_pred ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCC-------CC--CCc--------------cccccCCCCeEEE
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSD-------GP--AYI--------------TQCPIKGGQSYTY 98 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~D-------G~--~~~--------------~~~~i~pg~~~~y 98 (178)
..+.++.|+.+++.+.|....+|++|+||..|....... |. ... ....|+||+....
T Consensus 370 ~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~I 449 (534)
T 1zpu_A 370 HTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVI 449 (534)
T ss_dssp CEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEE
T ss_pred eEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEE
Confidence 368999999999999999999999999999886542111 20 000 1225789999999
Q ss_pred EEEecccCCceEEeechhhHhh-ccEEEEEEEcC
Q 035484 99 EFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 99 ~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
+|.+ +.+|.|+||||...|.. ||++.+++.+.
T Consensus 450 rF~a-DNPG~W~~HCHi~~H~~~GM~~~~~~~~~ 482 (534)
T 1zpu_A 450 RFKA-DNPGVWFFHCHIEWHLLQGLGLVLVEDPF 482 (534)
T ss_dssp EEEC-CSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred EEEe-CCCeeEEEEeCchhHhhcCCeEEEEECcc
Confidence 9985 89999999999999987 99999998765
No 64
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.25 E-value=1.8e-11 Score=106.61 Aligned_cols=89 Identities=18% Similarity=0.268 Sum_probs=69.0
Q ss_pred CceEEEecCCEEEEEEE-eCCCCCcceeecCccccCCCCCCCCCC-------c-cccccCC-CCeEEEEEEecccCCceE
Q 035484 41 GLAIAVYEGDNVQIKVT-NRVAQNTTIRWHGIRQLRTGWSDGPAY-------I-TQCPIKG-GQSYTYEFTIVNQRGTLL 110 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~-N~~~~~~~~H~HG~~~~~~~~~DG~~~-------~-~~~~i~p-g~~~~y~~~~~~~~Gt~~ 110 (178)
+++++++.|+.|+|.+. |....+|++|+||..|.... .+|... . ....|.| |+...++|.+ +.+|.|+
T Consensus 373 ~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~-~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~a-dnPG~W~ 450 (495)
T 3t6v_A 373 GSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSE-SASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCT-DNPGPWF 450 (495)
T ss_dssp TSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEE-CTTCCCCCSSSCCEESEEECCSTTCEEEEEEEC-CSCEEEE
T ss_pred cceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEe-cCCCCCcccCCCCCccEEEcCCCCcEEEEEEEc-CCCeeEE
Confidence 35699999999999998 67788999999999886532 233211 0 1224665 8999999975 8999999
Q ss_pred EeechhhHhh-ccEEEEEEEcC
Q 035484 111 WHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 111 yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
||||...|.. ||...++..++
T Consensus 451 ~HCHi~~H~~~Gm~~~~~e~~~ 472 (495)
T 3t6v_A 451 LHCHIDWHLDAGFAIVFAEDIP 472 (495)
T ss_dssp EEESCHHHHHTTCEEEEEETHH
T ss_pred EEecchhHhhcCCeEEEEEChh
Confidence 9999999987 99888866554
No 65
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.23 E-value=3.2e-11 Score=105.22 Aligned_cols=89 Identities=15% Similarity=0.186 Sum_probs=67.7
Q ss_pred CceEEEecCCEEEEEEE---eCCCCCcceeecCccccCCCCCCCCCC-------c-cccccCC---CCeEEEEEEecccC
Q 035484 41 GLAIAVYEGDNVQIKVT---NRVAQNTTIRWHGIRQLRTGWSDGPAY-------I-TQCPIKG---GQSYTYEFTIVNQR 106 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~---N~~~~~~~~H~HG~~~~~~~~~DG~~~-------~-~~~~i~p---g~~~~y~~~~~~~~ 106 (178)
+++++++.|+.|+|.+. |....+|++|+||..|.... .+|... . ....++| |+...++|.+ +.+
T Consensus 369 ~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~-~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~a-dnP 446 (499)
T 3pxl_A 369 GSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVR-SAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDT-NNP 446 (499)
T ss_dssp TSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEE-CTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEEC-CSC
T ss_pred ceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEe-ccCCcccccCCCCccceEEcCCcCCCcEEEEEEEc-CCC
Confidence 45799999999999998 66778999999999875532 223211 0 1124554 8999999975 999
Q ss_pred CceEEeechhhHhh-ccEEEEEEEcC
Q 035484 107 GTLLWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 107 Gt~~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
|.|+||||...|.. ||...++..++
T Consensus 447 G~W~~HCHi~~H~~~Gm~~~~~e~~~ 472 (499)
T 3pxl_A 447 GPWFLHCHIDFHLEGGFAVVMAEDTP 472 (499)
T ss_dssp EEEEEEESSHHHHHTTCEEEEEESGG
T ss_pred ceEEEEeCChhHhhCCCcEEEEEChh
Confidence 99999999999887 99877765543
No 66
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.21 E-value=5.2e-11 Score=99.00 Aligned_cols=100 Identities=18% Similarity=0.212 Sum_probs=81.0
Q ss_pred eEEEEEEcCccCC--ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCC-----ccccccCCCCeEEEEEE
Q 035484 29 KLLLLTVNGEYSG--LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAY-----ITQCPIKGGQSYTYEFT 101 (178)
Q Consensus 29 ~~~~~~~Ng~~pg--p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~-----~~~~~i~pg~~~~y~~~ 101 (178)
... |+|||+... +.|.++.|+++++++.|.....+.+|+||..+.... .||.+- .....|.||+++...|+
T Consensus 165 ~~~-~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~-~DG~~~~~p~~~dtv~l~pg~r~~v~~~ 242 (339)
T 2zwn_A 165 ADY-FSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTH-KDGLPLDSPYYADTVLVSPGERYDVIIE 242 (339)
T ss_dssp CCE-EEETTBCTTSSCCEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred cce-EEEccccCCCcccEEECCCCEEEEEEEeCCCceEEEEECCcEEEEEE-eCCeecCCCcEEEEEEECCCCEEEEEEE
Confidence 455 999997532 469999999999999999988999999999887643 688532 12346889999999998
Q ss_pred ecccCCceEEeechhhH------hh-ccEEEEEEEcC
Q 035484 102 IVNQRGTLLWHAHHSWQ------RA-SVYGAFIIYPR 131 (178)
Q Consensus 102 ~~~~~Gt~~yH~h~~~~------~~-Gl~G~liV~~~ 131 (178)
+ +++|.|++|||...+ .. ||.+.+.++..
T Consensus 243 ~-~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 243 A-DNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp C-CSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred e-CCCeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 6 789999999998876 33 89888888765
No 67
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.21 E-value=1.3e-10 Score=102.33 Aligned_cols=88 Identities=16% Similarity=0.114 Sum_probs=69.8
Q ss_pred eEEEecCCEEEEEEEeCC------CCCcceeecCccccCCCCCCCCC-------------C-ccccccCCCCeEEEEEEe
Q 035484 43 AIAVYEGDNVQIKVTNRV------AQNTTIRWHGIRQLRTGWSDGPA-------------Y-ITQCPIKGGQSYTYEFTI 102 (178)
Q Consensus 43 ~i~~~~Gd~v~v~~~N~~------~~~~~~H~HG~~~~~~~~~DG~~-------------~-~~~~~i~pg~~~~y~~~~ 102 (178)
++.++.|+.|++.+.|.. ..+|++|+||..|......+|.. . -....|+||+....+|.+
T Consensus 418 ~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~a 497 (552)
T 1aoz_A 418 VYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA 497 (552)
T ss_dssp CEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC
T ss_pred EEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEc
Confidence 489999999999999987 45799999999976532122321 0 012357899999999985
Q ss_pred cccCCceEEeechhhHhh-ccEEEEEEEcC
Q 035484 103 VNQRGTLLWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 103 ~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
+.+|.|++|||...|.. ||+..|.+.+.
T Consensus 498 -DNPG~W~~HCHi~~H~~~GM~~~~~~~~~ 526 (552)
T 1aoz_A 498 -DNPGVWAFHCHIEPHLHMGMGVVFAEGVE 526 (552)
T ss_dssp -CSCEEEEEEESSHHHHHTTCEEEEEECGG
T ss_pred -CCCeEEEEEeeehhHhhCCCeEEEEeCch
Confidence 89999999999999987 99999988765
No 68
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.20 E-value=6.7e-11 Score=97.89 Aligned_cols=99 Identities=16% Similarity=0.200 Sum_probs=81.2
Q ss_pred EEEEEEcCccCC----ceEEEecCCEEEEEEEeCCC-CCcceeecCccccCCCCCCCCCC----ccccccCCCCeEEEEE
Q 035484 30 LLLLTVNGEYSG----LAIAVYEGDNVQIKVTNRVA-QNTTIRWHGIRQLRTGWSDGPAY----ITQCPIKGGQSYTYEF 100 (178)
Q Consensus 30 ~~~~~~Ng~~pg----p~i~~~~Gd~v~v~~~N~~~-~~~~~H~HG~~~~~~~~~DG~~~----~~~~~i~pg~~~~y~~ 100 (178)
.. +.|||+... +.|.++.|+++++++.|... ..+.+|+||..+.... .||.+- .....|.||++++..|
T Consensus 199 ~~-~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~-~DG~~~~p~~~d~l~l~pGer~dv~v 276 (327)
T 1kbv_A 199 EY-VVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVY-VEGGKLINENVQSTIVPAGGSAIVEF 276 (327)
T ss_dssp SE-EEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEE-GGGSSCEECSBSEEEECTTEEEEEEE
T ss_pred ce-EEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEE-cCCCcCCCCceeEEEECCCCEEEEEE
Confidence 45 899998542 68999999999999999874 6899999998876542 688532 2334689999999999
Q ss_pred EecccCCceEEeechhhHh-h-ccEEEEEEEcC
Q 035484 101 TIVNQRGTLLWHAHHSWQR-A-SVYGAFIIYPR 131 (178)
Q Consensus 101 ~~~~~~Gt~~yH~h~~~~~-~-Gl~G~liV~~~ 131 (178)
++ +++|+||+|||...+. . |+.+.+.++.+
T Consensus 277 ~~-~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 277 KV-DIPGNYTLVDHSIFRAFNKGALGQLKVEGA 308 (327)
T ss_dssp EE-CSCEEEEEEESSTHHHHHSSCEEEEEEESC
T ss_pred Ee-CCCeEEEEEeccccccccCCcEEEEEECCC
Confidence 87 6799999999988874 4 89999999977
No 69
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.17 E-value=9.8e-11 Score=100.83 Aligned_cols=93 Identities=14% Similarity=0.127 Sum_probs=72.7
Q ss_pred EEEcCccC---CceEE-EecCCEEEEEEEeCC-CCCcceeecCccccCCCCCCCCCC-------------------cccc
Q 035484 33 LTVNGEYS---GLAIA-VYEGDNVQIKVTNRV-AQNTTIRWHGIRQLRTGWSDGPAY-------------------ITQC 88 (178)
Q Consensus 33 ~~~Ng~~p---gp~i~-~~~Gd~v~v~~~N~~-~~~~~~H~HG~~~~~~~~~DG~~~-------------------~~~~ 88 (178)
|+|||+.. .|.+. ++.|+++++.+.|.. ..+|++|+||..|.... .+|... -...
T Consensus 326 ~~iNg~~~~~~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~-~~G~~~~~~~~~~~~~~~~p~~~~~rDTv 404 (448)
T 3aw5_A 326 WTINGMFWNASNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIE-RKDSPRQVAELAVDNRGRLPTDLGLKDTV 404 (448)
T ss_dssp EEETTBCCCTTCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEE-EESCCHHHHTTCCSTTCCCGGGGSCBSEE
T ss_pred eeECCCcCCCCCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEE-ecCCCcccccccccccCCCccccCCccEE
Confidence 99999742 46677 999999999999999 89999999999886543 234321 0122
Q ss_pred ccCCCCeEEEE--EE---ecccCCceEEeechhhHhh-ccEEEEEEE
Q 035484 89 PIKGGQSYTYE--FT---IVNQRGTLLWHAHHSWQRA-SVYGAFIIY 129 (178)
Q Consensus 89 ~i~pg~~~~y~--~~---~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~ 129 (178)
.|.||++.+.. |. + +.+ |.||||...|.+ ||++.+.|.
T Consensus 405 ~v~pg~~~~i~vrF~~~~a-dnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 405 LIWPGETVKIVVNFDAKKR-GQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp EECTTCEEEEEEEECGGGT-TCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred EeCCCCEEEEEEEecccCC-CCc--EEEEcCChHHHhCCCceEEEeC
Confidence 57899998776 75 4 455 999999999997 999999884
No 70
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.17 E-value=2.7e-10 Score=94.48 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=76.1
Q ss_pred EEEEEEcCccC----CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCC------ccccccCCCCeEEEE
Q 035484 30 LLLLTVNGEYS----GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAY------ITQCPIKGGQSYTYE 99 (178)
Q Consensus 30 ~~~~~~Ng~~p----gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~------~~~~~i~pg~~~~y~ 99 (178)
.. |+|||+.. .|.+.+++|+++++.+.|.....+..|.||..+... .||..- .....|.||++++..
T Consensus 216 ~~-~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi--~dG~~~~~p~~~~dtv~l~pGer~~v~ 292 (340)
T 2bw4_A 216 TH-IVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVW--ATGKFRNPPDLDQETWLIPGGTAGAAF 292 (340)
T ss_dssp SE-EEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEE--TTCCTTSCCEEEESCCCBCTTEEEEEE
T ss_pred CE-EEECCccCCccCCCceEcCCCCEEEEEECCCCCccceEEecCcceEEe--CCCcccCCccccceEEEeCCCceEEEE
Confidence 45 99999864 389999999999988888766666666677665543 576431 123468899999999
Q ss_pred EEecccCCceEEeechhh-Hhh-ccEEEEEEEcC
Q 035484 100 FTIVNQRGTLLWHAHHSW-QRA-SVYGAFIIYPR 131 (178)
Q Consensus 100 ~~~~~~~Gt~~yH~h~~~-~~~-Gl~G~liV~~~ 131 (178)
++. +++|.||||||... +.. ||.|.+.|+.+
T Consensus 293 v~~-~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~ 325 (340)
T 2bw4_A 293 YTF-RQPGVYAYVNHNLIEAFELGAAGHFKVTGE 325 (340)
T ss_dssp EEC-CSCEEEEEEESSHHHHHTTSCEEEEEEESC
T ss_pred EEC-CCCeeeEEEcCchHHHHhCCCEEEEEECCC
Confidence 987 67999999999984 644 99999999977
No 71
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=99.15 E-value=9e-11 Score=80.95 Aligned_cols=77 Identities=10% Similarity=0.139 Sum_probs=62.5
Q ss_pred CccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechh
Q 035484 37 GEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHS 116 (178)
Q Consensus 37 g~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~ 116 (178)
..|--..|+++.||+|++.++|....+|.+...+.... ..+.||++.++.|+. +++|+|.|+|.
T Consensus 23 ~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~-- 86 (100)
T 4hci_A 23 DYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICR-- 86 (100)
T ss_dssp TEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECT--
T ss_pred CEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECc--
Confidence 34444589999999999999999988888777655421 257889999999975 89999999997
Q ss_pred hHhh-ccEEEEEEE
Q 035484 117 WQRA-SVYGAFIIY 129 (178)
Q Consensus 117 ~~~~-Gl~G~liV~ 129 (178)
.|.. ||.|.++|+
T Consensus 87 ~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 87 YHLLKGMEGKVIVK 100 (100)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred cccCCCCEEEEEEC
Confidence 4554 999999985
No 72
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=99.15 E-value=7.5e-11 Score=80.70 Aligned_cols=80 Identities=11% Similarity=0.172 Sum_probs=58.9
Q ss_pred CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCC-CCCccccccCCCCeEEEEEEecccCCceEEeechhhHh
Q 035484 41 GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDG-PAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQR 119 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG-~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~ 119 (178)
-+.|++++||+|++ +|....+|.+|+++...+.. .+. ........+.||+++++.| +++|+|+|||+ .|.
T Consensus 17 P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~--~H~ 87 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKL---TAAGEYGYYCE--PHQ 87 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGG
T ss_pred CCEEEECCCCEEEE--EECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEe---CCCeEEEEEcC--Ccc
Confidence 36899999999765 89988899999998654321 110 0001123688999999987 47999999999 455
Q ss_pred h-ccEEEEEEE
Q 035484 120 A-SVYGAFIIY 129 (178)
Q Consensus 120 ~-Gl~G~liV~ 129 (178)
. ||.|.|+|+
T Consensus 88 ~~gM~G~i~V~ 98 (98)
T 2plt_A 88 GAGMVGKIIVQ 98 (98)
T ss_dssp GGTCEEEEEEC
T ss_pred ccCCeEEEEEC
Confidence 4 999999984
No 73
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.13 E-value=5.6e-11 Score=102.41 Aligned_cols=93 Identities=10% Similarity=0.128 Sum_probs=73.7
Q ss_pred EEEcCccC---CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCc-------cccccCCCCeEEEEEEe
Q 035484 33 LTVNGEYS---GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYI-------TQCPIKGGQSYTYEFTI 102 (178)
Q Consensus 33 ~~~Ng~~p---gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~-------~~~~i~pg~~~~y~~~~ 102 (178)
|+|||+.. .+.+.++.|+++++.+.|. .+|++|+||..|.... .+|.+.. ....| |++.+..|..
T Consensus 335 ~~iNg~~f~~~~~~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~-~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~ 409 (451)
T 2uxt_A 335 PGINGQLWDVNRIDVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRN-VNGAMPFPEDRGWKDTVWV--DGQVELLVYF 409 (451)
T ss_dssp SSBTTBCCCTTCCCEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEE-ETTBCCCGGGSSCBSEEEE--EEEEEEEEEC
T ss_pred EEECCEeCCCCCCcEEcCCCCEEEEEEECC--CCcCeEECCceEEEEe-eCCcCCCcccCCCccEEEE--CCEEEEEEEe
Confidence 88999742 3579999999999999998 6999999999887643 4554311 11134 7888888876
Q ss_pred cccCCc----eEEeechhhHhh-ccEEEEEEEcC
Q 035484 103 VNQRGT----LLWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 103 ~~~~Gt----~~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
+.+|. |+||||...|.+ ||++.+.|.+.
T Consensus 410 -dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~ 442 (451)
T 2uxt_A 410 -GQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPV 442 (451)
T ss_dssp -CSCCBTTBCEEEEESSHHHHHTTCEEEEEEECS
T ss_pred -CCCCCCCCceEEeCCchhHHhCCCcEEEEEccC
Confidence 66776 999999999997 99999999875
No 74
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.13 E-value=3.8e-10 Score=82.31 Aligned_cols=91 Identities=11% Similarity=0.142 Sum_probs=66.4
Q ss_pred cCCceEEEecCCEEEEEEEe--CCCCCcceeecCcc--ccC-----------CCCC--CCCCC--ccccccCCCCeEEEE
Q 035484 39 YSGLAIAVYEGDNVQIKVTN--RVAQNTTIRWHGIR--QLR-----------TGWS--DGPAY--ITQCPIKGGQSYTYE 99 (178)
Q Consensus 39 ~pgp~i~~~~Gd~v~v~~~N--~~~~~~~~H~HG~~--~~~-----------~~~~--DG~~~--~~~~~i~pg~~~~y~ 99 (178)
|--+.|+++.||+|+|+++| ....+|.++++... +.. ..+. .+... .....|.||++.++.
T Consensus 30 F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 30 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 44569999999999999999 77789999887421 000 0000 01000 011357899999999
Q ss_pred EEecccCCceEEeechhhHhh-ccEEEEEEEc
Q 035484 100 FTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYP 130 (178)
Q Consensus 100 ~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~ 130 (178)
|++ +.+|+|+|||+...|.. ||.|.|+|.|
T Consensus 110 ~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 110 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 986 78999999999988876 9999999974
No 75
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.12 E-value=6.3e-10 Score=92.08 Aligned_cols=96 Identities=18% Similarity=0.170 Sum_probs=72.4
Q ss_pred EEEEEEcCcc---C-CceEEEecCCEEEEEEEeCCCC--CcceeecCccccCCCCCCCCCC------ccccccCCCCeEE
Q 035484 30 LLLLTVNGEY---S-GLAIAVYEGDNVQIKVTNRVAQ--NTTIRWHGIRQLRTGWSDGPAY------ITQCPIKGGQSYT 97 (178)
Q Consensus 30 ~~~~~~Ng~~---p-gp~i~~~~Gd~v~v~~~N~~~~--~~~~H~HG~~~~~~~~~DG~~~------~~~~~i~pg~~~~ 97 (178)
.. |+|||+. + .+.|.+++|+++++.+.|.... .+.+|.|+..+. .||..- .....|.||++.+
T Consensus 210 ~~-~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi----~dG~~~~~p~~~~dtv~l~pGer~~ 284 (333)
T 1mzy_A 210 SH-IVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVW----ETGKFHNAPERDLETWFIRGGTAGA 284 (333)
T ss_dssp SE-EEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEE----TTCCTTSCCEEEESBCCBCTTEEEE
T ss_pred cE-EEECCcccccCCCcceEecCCCEEEEEECCCCCccccEEECCCCeEEE----eCCcccCCCccCcceEEECCCceEE
Confidence 35 9999985 2 3789999999999988876543 344445554442 477431 2234689999999
Q ss_pred EEEEecccCCceEEeechhhHh-h-ccEEEEEEEcC
Q 035484 98 YEFTIVNQRGTLLWHAHHSWQR-A-SVYGAFIIYPR 131 (178)
Q Consensus 98 y~~~~~~~~Gt~~yH~h~~~~~-~-Gl~G~liV~~~ 131 (178)
..+++ +++|.||||||...+. . ||+|.|.|+.+
T Consensus 285 v~v~a-~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 285 ALYKF-LQPGVYAYVNHNLIEAVHKGATAHVLVEGE 319 (333)
T ss_dssp EEEEC-CSCEEEEEEESSHHHHHTTCCEEEEEEESC
T ss_pred EEEEc-CCCEEEEEecChhhhHhhCCCEEEEEEcCC
Confidence 99987 6799999999998775 4 99999999977
No 76
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.09 E-value=1.5e-11 Score=112.18 Aligned_cols=97 Identities=10% Similarity=0.078 Sum_probs=81.1
Q ss_pred EEEEEEcCccCC--ceEEEecCCEEEEEEEeCCCC--CcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEeccc
Q 035484 30 LLLLTVNGEYSG--LAIAVYEGDNVQIKVTNRVAQ--NTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQ 105 (178)
Q Consensus 30 ~~~~~~Ng~~pg--p~i~~~~Gd~v~v~~~N~~~~--~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~ 105 (178)
.+ ++|||+..+ |.+.++.|++++++|.|.... .|++|+||..+.... .||. ......|.||++++..|.+ ++
T Consensus 355 ~~-~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~-~dg~-~~Dtv~l~Pg~~~~v~~~a-d~ 430 (770)
T 2r7e_B 355 RF-HAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRK-KEEY-KMALYNLYPGVFETVEMLP-SK 430 (770)
T ss_dssp CE-ECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCS-SSCC-EESEEECCTTCCCEEEECC-SS
T ss_pred Cc-cccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEe-cCCc-eeeEEEECCCeEEEEEEEe-CC
Confidence 56 899998764 789999999999999998754 899999999987653 4553 2234578999999999976 78
Q ss_pred CCceEEeechhhHhh-ccEEEEEEEc
Q 035484 106 RGTLLWHAHHSWQRA-SVYGAFIIYP 130 (178)
Q Consensus 106 ~Gt~~yH~h~~~~~~-Gl~G~liV~~ 130 (178)
+|.|++|||...|.. ||.+.+.|..
T Consensus 431 pG~w~~hcH~~~H~~~GM~~~~~V~s 456 (770)
T 2r7e_B 431 AGIWRVECLIGEHLHAGMSTLFLVYS 456 (770)
T ss_dssp CBCCCBCCCSHHHHTTBCCCCCCBCC
T ss_pred CCceEEEecccccccccccccccccc
Confidence 999999999999887 9999998853
No 77
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=99.07 E-value=4.7e-10 Score=76.74 Aligned_cols=80 Identities=15% Similarity=0.207 Sum_probs=57.5
Q ss_pred CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechhhHhh
Q 035484 41 GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA 120 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~ 120 (178)
-+.|++++||+|++ +|....+|.+++++...+.. ..++.. .....+.||+++++.| +++|+|+|||+ .|..
T Consensus 18 P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~-~~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~ 88 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVPAD-TAAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRG 88 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECCSSSCHH-HHHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECG--GGTT
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCCCcc-cccccc-ccccccCCCCEEEEEc---CCCeEEEEEcC--Cccc
Confidence 35899999999765 48877899999887543200 000000 1123688999999887 57999999999 5665
Q ss_pred -ccEEEEEEE
Q 035484 121 -SVYGAFIIY 129 (178)
Q Consensus 121 -Gl~G~liV~ 129 (178)
||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 1pcs_A 89 AGMVGKVVVE 98 (98)
T ss_dssp TTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 999999984
No 78
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.05 E-value=5.3e-10 Score=98.70 Aligned_cols=88 Identities=18% Similarity=0.219 Sum_probs=65.3
Q ss_pred eEEEecCCEEEEEEEeC-C----CCCcceeecCccccCCCCCC---------CCC--------------C-ccccccCCC
Q 035484 43 AIAVYEGDNVQIKVTNR-V----AQNTTIRWHGIRQLRTGWSD---------GPA--------------Y-ITQCPIKGG 93 (178)
Q Consensus 43 ~i~~~~Gd~v~v~~~N~-~----~~~~~~H~HG~~~~~~~~~D---------G~~--------------~-~~~~~i~pg 93 (178)
.+.++.++++++.+.|+ . ..+|++|+||..|....... |.. . -....|+|+
T Consensus 405 ~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~ 484 (559)
T 2q9o_A 405 IVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAG 484 (559)
T ss_dssp EEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTT
T ss_pred EEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCC
Confidence 37888877777655444 4 68999999999886543111 211 0 012257889
Q ss_pred CeEEEEEEecccCCceEEeechhhHhh-ccEEEEEEEcC
Q 035484 94 QSYTYEFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 94 ~~~~y~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
+....+|.+ +.+|.|+||||...|.. ||++.|++.+.
T Consensus 485 g~v~IrF~a-dNPG~W~~HCHil~H~~~GM~~~~~v~~~ 522 (559)
T 2q9o_A 485 GWLLLAFRT-DNPGAWLFHCHIAWHVSGGLSVDFLERPA 522 (559)
T ss_dssp SEEEEEEEC-CSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred ccEEEEEEc-CCCeeEEEEecchhHhhcCCeEEEEECcc
Confidence 999999985 89999999999999997 99999999765
No 79
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.02 E-value=8.9e-10 Score=74.11 Aligned_cols=73 Identities=19% Similarity=0.310 Sum_probs=55.8
Q ss_pred CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechhhHhh
Q 035484 41 GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA 120 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~ 120 (178)
-+.|+++.||+|++ .|....+|.++.++... +. .....+.||+++++.| +++|+|+|||+ .|..
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~~----~~-----~~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~~ 81 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKLAPHNVVVEGQPE----LS-----HKDLAFSPGETFEATF---SEPGTYTYYCE--PHRG 81 (91)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEETTCGG----GC-----EEEEECSTTCEEEEEC---CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCc----cC-----cccceeCCCCEEEEEe---CCCEEEEEEeC--CCcc
Confidence 45899999999865 58877889999887311 00 1123688999988877 68999999999 4554
Q ss_pred -ccEEEEEEE
Q 035484 121 -SVYGAFIIY 129 (178)
Q Consensus 121 -Gl~G~liV~ 129 (178)
||.|.++|+
T Consensus 82 ~gM~g~i~V~ 91 (91)
T 1bxv_A 82 AGMVGKIVVQ 91 (91)
T ss_dssp GTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 999999984
No 80
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=99.00 E-value=1.3e-09 Score=74.28 Aligned_cols=76 Identities=16% Similarity=0.240 Sum_probs=56.5
Q ss_pred ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCC--ccccccCCCCeEEEEEEecccCCceEEeechhhHh
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAY--ITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQR 119 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~--~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~ 119 (178)
+.|++++||+|+ |.|....+|.++.++...+ +|..+ .....+.||+++++.| +++|+|+|||+ .|.
T Consensus 19 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTVE--FVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEEE--EEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--STT
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Chh
Confidence 589999999965 5588778899988875432 11000 0123578999999887 68999999999 566
Q ss_pred h-ccEEEEEEE
Q 035484 120 A-SVYGAFIIY 129 (178)
Q Consensus 120 ~-Gl~G~liV~ 129 (178)
. ||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 5 999999984
No 81
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.99 E-value=2.8e-09 Score=72.92 Aligned_cols=76 Identities=11% Similarity=0.170 Sum_probs=57.0
Q ss_pred ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCC------ccccccCCCCeEEEEEEecccCCceEEeech
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAY------ITQCPIKGGQSYTYEFTIVNQRGTLLWHAHH 115 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~------~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~ 115 (178)
..|++++||+|++ +|....+|.+++++..++ +|... .....+.||+++++.| +++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f---~~~G~y~~~C~- 85 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCA- 85 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECG-
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEe---CCCcEEEEEcC-
Confidence 5899999998654 899888999999875432 11100 1112578999999887 48999999999
Q ss_pred hhHhh-ccEEEEEEE
Q 035484 116 SWQRA-SVYGAFIIY 129 (178)
Q Consensus 116 ~~~~~-Gl~G~liV~ 129 (178)
.|.. ||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 -PHAGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CccccCCEEEEEEC
Confidence 5664 999999984
No 82
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=98.97 E-value=4.8e-09 Score=86.77 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=71.8
Q ss_pred EEEEEEcCccC----CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCc------cccccCCCCeEEEE
Q 035484 30 LLLLTVNGEYS----GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYI------TQCPIKGGQSYTYE 99 (178)
Q Consensus 30 ~~~~~~Ng~~p----gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~------~~~~i~pg~~~~y~ 99 (178)
.. ++|||+.. .|.|.+++|+++++...|........+.||..+... .||.+-. ....|.||++++..
T Consensus 210 ~~-~liNG~~~~~~~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi--~DG~~~~p~~~~~dtv~i~pGer~dvl 286 (336)
T 1oe1_A 210 SH-IVFNGKVGALTGANALTAKVGETVLLIHSQANRDTRPHLIGGHGDWVW--ETGKFANPPQRDLETWFIRGGSAGAAL 286 (336)
T ss_dssp SE-EEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEETTCCEEEEE--TTCCTTSCCEEEESBCCBCTTEEEEEE
T ss_pred CE-EEECCeeccCCCCcceEcCCCCEEEEEecCCCCccceEEECCcCceEe--CCCcCcCCccccceEEEECCCCcEEEE
Confidence 45 99999864 389999999999886665544432222355444333 5885321 23468999999999
Q ss_pred EEecccCCceEEeechhhHh-h-ccEEEEEEEcC
Q 035484 100 FTIVNQRGTLLWHAHHSWQR-A-SVYGAFIIYPR 131 (178)
Q Consensus 100 ~~~~~~~Gt~~yH~h~~~~~-~-Gl~G~liV~~~ 131 (178)
++. +++|+||+|||...+. . ||.|.+.|+++
T Consensus 287 v~~-~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~ 319 (336)
T 1oe1_A 287 YTF-KQPGVYAYLNHNLIEAFELGAAGHIKVEGK 319 (336)
T ss_dssp EEC-CSCEEEEEEESSHHHHHTTSCEEEEEEESC
T ss_pred EEc-CCCceEEEEechhhccccCCCeEEEEECCC
Confidence 986 6799999999998764 4 99999999977
No 83
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=98.96 E-value=3e-09 Score=91.00 Aligned_cols=100 Identities=14% Similarity=0.172 Sum_probs=81.0
Q ss_pred EEEEEEcCccCC----ceEEEecCCEEEEEEEeCCC-CCcceeecCccccCCCCCCCCCC----ccccccCCCCeEEEEE
Q 035484 30 LLLLTVNGEYSG----LAIAVYEGDNVQIKVTNRVA-QNTTIRWHGIRQLRTGWSDGPAY----ITQCPIKGGQSYTYEF 100 (178)
Q Consensus 30 ~~~~~~Ng~~pg----p~i~~~~Gd~v~v~~~N~~~-~~~~~H~HG~~~~~~~~~DG~~~----~~~~~i~pg~~~~y~~ 100 (178)
.. ++|||+... +.|.++.|+++++++.|... ..+.+|+||..+.... .||.+- .....|.||++++..+
T Consensus 189 ~~-~liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~-~DG~~~~p~~~~~~~l~pg~r~~v~v 266 (442)
T 2zoo_A 189 DY-VVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVY-VEGGSLKNHNVQTTLIPAGGAAIVEF 266 (442)
T ss_dssp SE-EEETTSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEE-GGGSSCEECSBSEEEECTTEEEEEEE
T ss_pred CE-EEECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEe-cCCccCCCccceEEEECCCeeEEEEE
Confidence 45 899998643 68999999999999999764 6799999998876542 788532 1233688999999999
Q ss_pred EecccCCceEEeechhhHh-h-ccEEEEEEEcCC
Q 035484 101 TIVNQRGTLLWHAHHSWQR-A-SVYGAFIIYPRM 132 (178)
Q Consensus 101 ~~~~~~Gt~~yH~h~~~~~-~-Gl~G~liV~~~~ 132 (178)
++ +++|+||+|||...+. . |+.+.|.|....
T Consensus 267 ~~-~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 267 KV-EVPGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp EC-CSCEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred Ec-CCCCeEEEEecccccccccCceEEEEecCCC
Confidence 87 6799999999988773 4 999999998773
No 84
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.95 E-value=4.6e-09 Score=71.87 Aligned_cols=79 Identities=9% Similarity=0.147 Sum_probs=57.0
Q ss_pred CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCC----CCCCccccccCCCCeEEEEEEecccCCceEEeechh
Q 035484 41 GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSD----GPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHS 116 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~D----G~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~ 116 (178)
-+.|++++||+|++ +|....+|.++.+....+.. .+ +.. .....+.||+++++.| +++|+|+|+|+
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p~~--~~~~~~~~~-~~~~~~~~G~~~~~tf---~~~G~y~~~C~-- 85 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAGFPHNIVFDEDSIPSG--VDASKISMS-EEDLLNAKGETFEVAL---SNKGEYSFYCS-- 85 (99)
T ss_dssp SSEEEECTTCEEEE--EECSSCCBCCEECTTSSCTT--CCHHHHCCC-TTCCBCSTTCEEEEEC---CSCEEEEEECG--
T ss_pred CCEEEECCCCEEEE--EECCCCceEEEEeCCCCccc--ccccccccc-cCccccCCCCEEEEEE---CCCceEEEEcC--
Confidence 35899999998765 89888899998886533210 01 000 0112578999999887 48999999999
Q ss_pred hHhh-ccEEEEEEE
Q 035484 117 WQRA-SVYGAFIIY 129 (178)
Q Consensus 117 ~~~~-Gl~G~liV~ 129 (178)
.|.. ||.|.++|+
T Consensus 86 ~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 PHQGAGMVGKVTVN 99 (99)
T ss_dssp GGTTTTCEEEEEEC
T ss_pred CCcccCCEEEEEEC
Confidence 5665 999999984
No 85
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.94 E-value=2e-09 Score=74.02 Aligned_cols=82 Identities=13% Similarity=0.089 Sum_probs=55.7
Q ss_pred CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCC--CCCCCCc--cccccCCCCeEEEEEEecccCCceEEeechh
Q 035484 41 GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGW--SDGPAYI--TQCPIKGGQSYTYEFTIVNQRGTLLWHAHHS 116 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~--~DG~~~~--~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~ 116 (178)
-+.|++++||+|+ |+|....+|.++++.-......+ ++..++. ....+.||+++++.| +++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~-- 88 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCT-- 88 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECS--
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeC--
Confidence 4689999999987 45888788888887311100000 0000111 123578999999887 68999999999
Q ss_pred hHhh-ccEEEEEEE
Q 035484 117 WQRA-SVYGAFIIY 129 (178)
Q Consensus 117 ~~~~-Gl~G~liV~ 129 (178)
.|.. ||.|.|+|+
T Consensus 89 ~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 89 PHKSANMKGTLTVK 102 (102)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CCcccCCeEEEEEC
Confidence 5664 999999984
No 86
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.93 E-value=1.2e-08 Score=73.15 Aligned_cols=75 Identities=13% Similarity=0.084 Sum_probs=53.0
Q ss_pred CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechhhHhh
Q 035484 41 GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA 120 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~ 120 (178)
-..|++++||+|++.++|. +|++..+... +-+|.. ...+.||+++++.| +++|+|+|+|. .|..
T Consensus 20 P~~i~V~~GdtV~f~~~~~---~H~v~~~~~~-----~P~g~~---~f~~~pg~t~s~TF---~~pG~y~y~C~--~H~~ 83 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK---SHNVEAIKEI-----LPEGVE---SFKSKINESYTLTV---TEPGLYGVKCT--PHFG 83 (123)
T ss_dssp SSEEEECTTEEEEEEESST---TCCCEECTTS-----SCTTCC---CCBCCTTCCEEEEE---CSCEEEEEECG--GGTT
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEcCCc-----CCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeC--CCCc
Confidence 3599999999988887762 4444443211 122321 12357899998888 58999999999 5554
Q ss_pred -ccEEEEEEEcC
Q 035484 121 -SVYGAFIIYPR 131 (178)
Q Consensus 121 -Gl~G~liV~~~ 131 (178)
||.|.++|.+.
T Consensus 84 ~GM~G~I~V~~~ 95 (123)
T 3erx_A 84 MGMVGLVQVGDA 95 (123)
T ss_dssp TTCEEEEEESSS
T ss_pred CCcEEEEEECCC
Confidence 99999999973
No 87
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.88 E-value=1.4e-08 Score=73.24 Aligned_cols=75 Identities=13% Similarity=0.170 Sum_probs=52.3
Q ss_pred CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechhhHhh
Q 035484 41 GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA 120 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~ 120 (178)
-+.|++++||+|++.+.|. +|++..+.... -+|.. ..-+.||+++++.| +.+|+|+|||. .|..
T Consensus 22 P~~i~V~~GDtVtf~n~~~---~H~v~~~~~~~-----P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~--~H~~ 85 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK---GHNSALMKGGA-----PEGAE---TWKGKINEEITVTL---SKPGVYMYQCA--PHVG 85 (127)
T ss_dssp SSEEEECTTCEEEEECSSS---SCCCEECTTCS-----CTTCC---CCBCCTTCCCEEEC---CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEccCcC-----CCCcc---ceecCCCCEEEEEe---CCCeEEEEEeC--CCCc
Confidence 4699999999987766653 45444432111 12211 12457899988888 58999999999 3444
Q ss_pred -ccEEEEEEEcC
Q 035484 121 -SVYGAFIIYPR 131 (178)
Q Consensus 121 -Gl~G~liV~~~ 131 (178)
||.|.++|.++
T Consensus 86 ~GM~G~I~V~~~ 97 (127)
T 3tu6_A 86 MGMIGAIVVGEP 97 (127)
T ss_dssp GTCEEEEEESSC
T ss_pred CCcEEEEEECcC
Confidence 99999999976
No 88
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.84 E-value=7.6e-09 Score=74.29 Aligned_cols=75 Identities=9% Similarity=-0.017 Sum_probs=53.2
Q ss_pred CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechhhHhh
Q 035484 41 GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA 120 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~ 120 (178)
-..|+++.||+|++. |.. .+|++..+.... -+|.. ...+.||+++++.| +.+|+|+|||. .|..
T Consensus 21 P~~i~V~~GDTV~f~--n~~-~~Hnv~~~~~~~-----p~g~~---~~~~~pg~t~s~TF---~~~G~y~Y~C~--~H~~ 84 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFV--PTD-KSHNAESVREVW-----PEGVA---PVKGGFSKEVVFNA---EKEGLYVLKCA--PHYG 84 (124)
T ss_dssp SSEEEECTTCEEEEE--CSS-SSCCCEECTTTS-----CTTSC---CCBCCTTCCEEEEC---CSSEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEEE--ECC-CCccEEEeCCcC-----CCCcc---ccccCCCCEEEEEe---CCCeEEEEEcC--CCCc
Confidence 359999999997655 544 566666653221 12221 12467899999888 58999999997 4554
Q ss_pred -ccEEEEEEEcC
Q 035484 121 -SVYGAFIIYPR 131 (178)
Q Consensus 121 -Gl~G~liV~~~ 131 (178)
||.|.++|.++
T Consensus 85 ~GM~G~I~V~~p 96 (124)
T 3ef4_A 85 MGMVVLVQVGKP 96 (124)
T ss_dssp GTCEEEEEESSC
T ss_pred CCCEEEEEECCC
Confidence 99999999875
No 89
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.82 E-value=4.3e-08 Score=70.78 Aligned_cols=92 Identities=11% Similarity=0.084 Sum_probs=62.2
Q ss_pred cCCceEEEecC-CEEEEEEEeCCCCC-----cceeec--Ccccc-------CCCCCC----CCCC--ccccccCCCCeEE
Q 035484 39 YSGLAIAVYEG-DNVQIKVTNRVAQN-----TTIRWH--GIRQL-------RTGWSD----GPAY--ITQCPIKGGQSYT 97 (178)
Q Consensus 39 ~pgp~i~~~~G-d~v~v~~~N~~~~~-----~~~H~H--G~~~~-------~~~~~D----G~~~--~~~~~i~pg~~~~ 97 (178)
|--..|.+++| ++|+|.|+|....+ |.+-+- |.... ....++ +.+. .....|.||++.+
T Consensus 15 F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~s 94 (129)
T 1cuo_A 15 YSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTS 94 (129)
T ss_dssp CSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEE
T ss_pred EccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEE
Confidence 33358999999 99999999998654 554332 21000 000000 0010 0123578999999
Q ss_pred EEEEec--ccCCceEEeechhhHhhccEEEEEEEc
Q 035484 98 YEFTIV--NQRGTLLWHAHHSWQRASVYGAFIIYP 130 (178)
Q Consensus 98 y~~~~~--~~~Gt~~yH~h~~~~~~Gl~G~liV~~ 130 (178)
+.|+++ .++|+|||.|...+|+.||.|-|+|.+
T Consensus 95 vtf~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 95 VKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EEEeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 999862 289999999998888889999999974
No 90
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.81 E-value=6.4e-09 Score=92.18 Aligned_cols=84 Identities=14% Similarity=0.207 Sum_probs=64.7
Q ss_pred ecCCEEEEEEEeCC--CCCcceeecCccccCCCCCCCCC----C-----------ccccccCCCCeEEEEEEecccCCce
Q 035484 47 YEGDNVQIKVTNRV--AQNTTIRWHGIRQLRTGWSDGPA----Y-----------ITQCPIKGGQSYTYEFTIVNQRGTL 109 (178)
Q Consensus 47 ~~Gd~v~v~~~N~~--~~~~~~H~HG~~~~~~~~~DG~~----~-----------~~~~~i~pg~~~~y~~~~~~~~Gt~ 109 (178)
+.|+.|+|.+.|.. ..+|++|+||..|...+...|.- . -....+.|++....+|.+ +.+|.|
T Consensus 444 ~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~a-dNPG~W 522 (580)
T 3sqr_A 444 ANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKL-DNPGSW 522 (580)
T ss_dssp --CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEES-CSCEEE
T ss_pred CCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEc-CCCeee
Confidence 35999999999998 88999999999875432122210 0 012257889999999986 899999
Q ss_pred EEeechhhHhh-ccEEEEEEEcC
Q 035484 110 LWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 110 ~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
++|||...|.. ||...+++.++
T Consensus 523 ~~HCHi~~H~~~Gm~~~~~e~~~ 545 (580)
T 3sqr_A 523 LLHCHIAWHASEGLAMQFVESQS 545 (580)
T ss_dssp EEEECSHHHHHTTCEEEEEESGG
T ss_pred EEEECcHHHhhCCCcEEEEECHH
Confidence 99999999887 99999888765
No 91
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.77 E-value=4.5e-08 Score=73.65 Aligned_cols=97 Identities=13% Similarity=0.106 Sum_probs=65.1
Q ss_pred EEEcC--ccCCceEEE-ecCCEEEEEEEeCCCCC-----cceee--cCcccc------CCCCCC----CCCC--cccccc
Q 035484 33 LTVNG--EYSGLAIAV-YEGDNVQIKVTNRVAQN-----TTIRW--HGIRQL------RTGWSD----GPAY--ITQCPI 90 (178)
Q Consensus 33 ~~~Ng--~~pgp~i~~-~~Gd~v~v~~~N~~~~~-----~~~H~--HG~~~~------~~~~~D----G~~~--~~~~~i 90 (178)
+..++ +|--..|.+ +.|++|+|+|+|....+ |.+-+ ++.... ....++ +-+. .....|
T Consensus 47 I~~~d~m~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l 126 (167)
T 3ay2_A 47 VESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLI 126 (167)
T ss_dssp EEECTTSCBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCB
T ss_pred EEeCCCceEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceee
Confidence 55554 344458999 99999999999998765 44433 221000 000000 0000 012257
Q ss_pred CCCCeEEEEEEecc--cCCceEEeechhhHhhccEEEEEEEc
Q 035484 91 KGGQSYTYEFTIVN--QRGTLLWHAHHSWQRASVYGAFIIYP 130 (178)
Q Consensus 91 ~pg~~~~y~~~~~~--~~Gt~~yH~h~~~~~~Gl~G~liV~~ 130 (178)
.||++.++.|++ . ++|+|+|+|...+|+.||.|-|+|.+
T Consensus 127 ~pGet~svtf~~-~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 127 GGGEESSLTLDP-AKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp CTTCEEEEEECG-GGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred CCCCEEEEEEec-CCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 999999999975 4 89999999998888889999999974
No 92
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.72 E-value=5.1e-08 Score=70.53 Aligned_cols=77 Identities=16% Similarity=0.199 Sum_probs=56.5
Q ss_pred ccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechhh
Q 035484 38 EYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSW 117 (178)
Q Consensus 38 ~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~ 117 (178)
.|--+.|+++.||+|++ +|....+|.+++.... +|........+.||+++++.| +++|+|+|+|..+.
T Consensus 56 ~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~H~ 123 (132)
T 3c75_A 56 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 123 (132)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCCCc
Confidence 44457999999999865 5988888888775422 121122223578999999888 58999999998632
Q ss_pred HhhccEEEEEEE
Q 035484 118 QRASVYGAFIIY 129 (178)
Q Consensus 118 ~~~Gl~G~liV~ 129 (178)
||.|.++|+
T Consensus 124 ---gM~G~I~V~ 132 (132)
T 3c75_A 124 ---FMRGKVIVE 132 (132)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 999999984
No 93
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.65 E-value=3.2e-07 Score=66.20 Aligned_cols=91 Identities=16% Similarity=0.164 Sum_probs=61.1
Q ss_pred cCCceEEE-ecCCEEEEEEEeCCCCC-----cceeec--Cccc-------cCCCCCC----CCCC-c-cccccCCCCeEE
Q 035484 39 YSGLAIAV-YEGDNVQIKVTNRVAQN-----TTIRWH--GIRQ-------LRTGWSD----GPAY-I-TQCPIKGGQSYT 97 (178)
Q Consensus 39 ~pgp~i~~-~~Gd~v~v~~~N~~~~~-----~~~H~H--G~~~-------~~~~~~D----G~~~-~-~~~~i~pg~~~~ 97 (178)
|--..|.+ +.|++|+|.|+|....+ |.+-+- +... .....++ +-+. + ....|.||++.+
T Consensus 15 F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~s 94 (129)
T 2ccw_A 15 YNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDS 94 (129)
T ss_dssp BSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred EecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEE
Confidence 33458999 99999999999998764 554432 2000 0000000 0010 0 122579999999
Q ss_pred EEEEecc--cCCc-eEEeechhhHhhccEEEEEEEc
Q 035484 98 YEFTIVN--QRGT-LLWHAHHSWQRASVYGAFIIYP 130 (178)
Q Consensus 98 y~~~~~~--~~Gt-~~yH~h~~~~~~Gl~G~liV~~ 130 (178)
+.|+. . .+|. |+|.|...+|+.||.|-|+|.+
T Consensus 95 vtf~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 95 VTFDV-SKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp EEEEG-GGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred EEEec-cccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 99986 4 5665 9999998888889999999863
No 94
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.65 E-value=5.8e-08 Score=66.34 Aligned_cols=77 Identities=10% Similarity=0.093 Sum_probs=55.0
Q ss_pred CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCC----ccccccCCCCeEEEEEEecccCCceEEeechh
Q 035484 41 GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAY----ITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHS 116 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~----~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~ 116 (178)
-+.|++++||+|++ +|....+|.+....-.. .+|.-. .....+.||+++++.| +++|+|+|+|..
T Consensus 17 P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~- 85 (98)
T 1iuz_A 17 PSKISVAAGEAIEF--VNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEP- 85 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTT-
T ss_pred CCEEEECCCCEEEE--EECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchh-
Confidence 46899999999665 58877788877654221 122110 0112578999998887 589999999985
Q ss_pred hHhh-ccEEEEEEE
Q 035484 117 WQRA-SVYGAFIIY 129 (178)
Q Consensus 117 ~~~~-Gl~G~liV~ 129 (178)
|.. ||.|.++|+
T Consensus 86 -H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 -HAGAGMKMTITVQ 98 (98)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -hccCCCEEEEEEC
Confidence 554 999999984
No 95
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.59 E-value=1.5e-07 Score=67.28 Aligned_cols=75 Identities=15% Similarity=0.076 Sum_probs=50.2
Q ss_pred CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechhhHhh
Q 035484 41 GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA 120 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~ 120 (178)
-+.|+++.||+|++. |... +|.+..+--. +.+|... ..+.||+++++.| +.+|+|+|+|. .|..
T Consensus 20 P~~i~V~~GdtV~f~--~~~~-~H~v~~~~~~-----~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~ 83 (123)
T 1paz_A 20 PAYIKANPGDTVTFI--PVDK-GHNVESIKDM-----IPEGAEK---FKSKINENYVLTV---TQPGAYLVKCT--PHYA 83 (123)
T ss_dssp SSEEEECTTCEEEEE--ESSS-SCCCEECTTC-----SCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEEE--ECCC-CeEEEEeccc-----CCCCccc---eecCCCCEEEEEe---CCCEEEEEEeC--Cccc
Confidence 458999999997654 4433 4554443110 1122211 1346899988887 57999999997 3554
Q ss_pred -ccEEEEEEEcC
Q 035484 121 -SVYGAFIIYPR 131 (178)
Q Consensus 121 -Gl~G~liV~~~ 131 (178)
||.|.++|.++
T Consensus 84 ~gM~G~I~V~~~ 95 (123)
T 1paz_A 84 MGMIALIAVGDS 95 (123)
T ss_dssp GTCEEEEEESSS
T ss_pred CCCEEEEEEcCC
Confidence 99999999874
No 96
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.59 E-value=4.9e-07 Score=65.11 Aligned_cols=91 Identities=13% Similarity=0.162 Sum_probs=61.7
Q ss_pred cCCceEEE-ecCCEEEEEEEeCCCCC-----cceeecCcc--c-------cCCCCCC----CCCC-c-cccccCCCCeEE
Q 035484 39 YSGLAIAV-YEGDNVQIKVTNRVAQN-----TTIRWHGIR--Q-------LRTGWSD----GPAY-I-TQCPIKGGQSYT 97 (178)
Q Consensus 39 ~pgp~i~~-~~Gd~v~v~~~N~~~~~-----~~~H~HG~~--~-------~~~~~~D----G~~~-~-~~~~i~pg~~~~ 97 (178)
|--..|.+ +.|++|+|+|+|....+ |.+-+-... . .....++ +-+. + ....|.||++.+
T Consensus 14 F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~ 93 (128)
T 2iaa_C 14 FNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDS 93 (128)
T ss_dssp BSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred EecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEE
Confidence 44458999 99999999999998765 655432110 0 0000000 0010 0 122579999999
Q ss_pred EEEEecc--cCCc-eEEeechhhHhhccEEEEEEEc
Q 035484 98 YEFTIVN--QRGT-LLWHAHHSWQRASVYGAFIIYP 130 (178)
Q Consensus 98 y~~~~~~--~~Gt-~~yH~h~~~~~~Gl~G~liV~~ 130 (178)
+.|++ . ++|+ |+|.|...+|+.||.|-|+|.+
T Consensus 94 vtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 94 VTFDV-SKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp EEEES-SCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred EEEec-cccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 99975 4 7885 9999999888889999999863
No 97
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.59 E-value=7.5e-07 Score=64.14 Aligned_cols=90 Identities=13% Similarity=0.117 Sum_probs=60.7
Q ss_pred cCCceEEE-ecCCEEEEEEEeCCCCC-----cceeec--Cccc-------cCCCCCC----CCCC-c-cccccCCCCeEE
Q 035484 39 YSGLAIAV-YEGDNVQIKVTNRVAQN-----TTIRWH--GIRQ-------LRTGWSD----GPAY-I-TQCPIKGGQSYT 97 (178)
Q Consensus 39 ~pgp~i~~-~~Gd~v~v~~~N~~~~~-----~~~H~H--G~~~-------~~~~~~D----G~~~-~-~~~~i~pg~~~~ 97 (178)
|--..|.+ +.|++|+|+|+|....+ |.+-+- +... .....++ +-+. + ....|.||++.+
T Consensus 15 F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~s 94 (128)
T 1nwp_A 15 FNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDS 94 (128)
T ss_dssp BSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred EecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEE
Confidence 44458999 99999999999998764 555442 1110 0000000 0000 0 112589999999
Q ss_pred EEEEecc--cCCc-eEEeechhhHhhccEEEEEEE
Q 035484 98 YEFTIVN--QRGT-LLWHAHHSWQRASVYGAFIIY 129 (178)
Q Consensus 98 y~~~~~~--~~Gt-~~yH~h~~~~~~Gl~G~liV~ 129 (178)
+.|+. . .+|+ |+|.|...+|+.||.|-|+|.
T Consensus 95 vtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 95 VTFDV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 99975 4 6776 999999888888999999983
No 98
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.57 E-value=2.4e-07 Score=64.36 Aligned_cols=77 Identities=16% Similarity=0.205 Sum_probs=54.1
Q ss_pred ccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechhh
Q 035484 38 EYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSW 117 (178)
Q Consensus 38 ~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~ 117 (178)
.|--..|+++.||+|++ +|....+|.+....... |........+.||+++++.| +++|+|+|+|-.+.
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~ 97 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 97 (106)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC
Confidence 34446999999999865 48877777766543221 11111122578999998887 58999999998632
Q ss_pred HhhccEEEEEEE
Q 035484 118 QRASVYGAFIIY 129 (178)
Q Consensus 118 ~~~Gl~G~liV~ 129 (178)
||.|.++|+
T Consensus 98 ---~M~G~I~V~ 106 (106)
T 1id2_A 98 ---FMRGKVIVE 106 (106)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 999999984
No 99
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.56 E-value=1.6e-07 Score=67.18 Aligned_cols=75 Identities=11% Similarity=0.123 Sum_probs=50.6
Q ss_pred CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechhhHhh
Q 035484 41 GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA 120 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~ 120 (178)
-+.|+++.||+|++ +|... +|.+..+. ..+.+|.. ...+.||+++++.| +.+|+|+|+|. .|..
T Consensus 20 P~~i~V~~GdtV~f--~n~~~-~H~v~~~~-----~~~p~~~~---~~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~ 83 (123)
T 1pmy_A 20 PALVRLKPGDSIKF--LPTDK-GHNVETIK-----GMAPDGAD---YVKTTVGQEAVVKF---DKEGVYGFKCA--PHYM 83 (123)
T ss_dssp SSEEEECTTCEEEE--ECSSS-SCCCEECT-----TSSCTTCC---CCBCCTTSCEEEEC---CSCEEEEEECS--TTTT
T ss_pred CCEEEECCCCEEEE--EECCC-CcEEEEec-----ccCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeC--Cccc
Confidence 35899999999665 55543 55444431 11122221 12456899988887 57999999998 3554
Q ss_pred -ccEEEEEEEcC
Q 035484 121 -SVYGAFIIYPR 131 (178)
Q Consensus 121 -Gl~G~liV~~~ 131 (178)
||.|.++|.++
T Consensus 84 ~gM~G~I~V~~~ 95 (123)
T 1pmy_A 84 MGMVALVVVGDK 95 (123)
T ss_dssp TTCEEEEEESSC
T ss_pred cCCEEEEEEcCC
Confidence 99999999874
No 100
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.55 E-value=5.8e-07 Score=79.07 Aligned_cols=85 Identities=14% Similarity=0.173 Sum_probs=64.0
Q ss_pred EEEcCccCCceEEEecCCEEEEEEEeCC---CCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCce
Q 035484 33 LTVNGEYSGLAIAVYEGDNVQIKVTNRV---AQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTL 109 (178)
Q Consensus 33 ~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~---~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~ 109 (178)
...+-.|--+.|++++|++|++.++|.. +..|++...+... ..-+.||++.++.|++ +++|+|
T Consensus 549 ta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI-------------K~DaiPGrtnsvtFta-dkPGvY 614 (638)
T 3sbq_A 549 TSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV-------------SMEISPQQTSSITFVA-DKPGLH 614 (638)
T ss_dssp EEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE-------------EEEECTTCEEEEEEEC-CSCEEE
T ss_pred EEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCCCc-------------eeeeCCCCeEEEEEEc-CCCEEE
Confidence 4555566678999999999999999974 4455544433221 1257899999999986 899999
Q ss_pred EEeechh-hHhh-ccEEEEEEEcC
Q 035484 110 LWHAHHS-WQRA-SVYGAFIIYPR 131 (178)
Q Consensus 110 ~yH~h~~-~~~~-Gl~G~liV~~~ 131 (178)
+|+|... +... +|.|.++|+|+
T Consensus 615 ~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 615 WYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEECCCcCCCCcccceEEEEEecC
Confidence 9999953 3232 89999999975
No 101
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.34 E-value=1.2e-06 Score=62.55 Aligned_cols=74 Identities=15% Similarity=0.116 Sum_probs=50.4
Q ss_pred CceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeechhhHhh
Q 035484 41 GLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHHSWQRA 120 (178)
Q Consensus 41 gp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~~~~~~ 120 (178)
-+.|++++||+|++ +|... .|.++..... +.+|.. ...+.||+++++.| +++|+|+|+|.. |.
T Consensus 20 P~~i~V~~GdtV~f--~n~d~-~H~v~~~~~~-----~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~--H~- 82 (122)
T 2ux6_A 20 PASLKVAPGDTVTF--IPTDK-GHNVETIKGM-----IPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTP--HP- 82 (122)
T ss_dssp SSEEEECTTEEEEE--EESSS-SCCCEECTTC-----SCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETT--EE-
T ss_pred CCEEEECCCCEEEE--EECCC-CcEEEEcccc-----cCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCC--Cc-
Confidence 35899999999765 46544 5555554311 112211 12456899998888 589999999986 33
Q ss_pred ccEEEEEEEcC
Q 035484 121 SVYGAFIIYPR 131 (178)
Q Consensus 121 Gl~G~liV~~~ 131 (178)
.|.|.++|.+.
T Consensus 83 ~M~G~I~V~~~ 93 (122)
T 2ux6_A 83 FMVGVVQVGDA 93 (122)
T ss_dssp EEEEEEEESSS
T ss_pred cCEEEEEEeCC
Confidence 39999999874
No 102
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.93 E-value=0.00012 Score=52.32 Aligned_cols=88 Identities=9% Similarity=0.149 Sum_probs=55.5
Q ss_pred cCCceEEEec-CCEEEEEEEeCCCCC-----cceee--------c---Ccccc-CCCCC-CCCCCc--cccccCCCCeEE
Q 035484 39 YSGLAIAVYE-GDNVQIKVTNRVAQN-----TTIRW--------H---GIRQL-RTGWS-DGPAYI--TQCPIKGGQSYT 97 (178)
Q Consensus 39 ~pgp~i~~~~-Gd~v~v~~~N~~~~~-----~~~H~--------H---G~~~~-~~~~~-DG~~~~--~~~~i~pg~~~~ 97 (178)
|--..|.+++ |++|+++|+|....| |.+=+ | |+..- ...+. .+-+.+ ....|.||++.+
T Consensus 15 F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~ 94 (125)
T 3fsa_A 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (125)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred EecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEE
Confidence 4456899976 999999999999664 43322 1 11100 00000 011110 122479999999
Q ss_pred EEEEec--ccCCceEEeechhhHhhccEEEEEEE
Q 035484 98 YEFTIV--NQRGTLLWHAHHSWQRASVYGAFIIY 129 (178)
Q Consensus 98 y~~~~~--~~~Gt~~yH~h~~~~~~Gl~G~liV~ 129 (178)
..|+.+ ..+|+|.|.|. +|+ ||.|-++|.
T Consensus 95 vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 95 VTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 999863 27999999999 777 999999883
No 103
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=97.65 E-value=0.00019 Score=51.92 Aligned_cols=74 Identities=15% Similarity=0.223 Sum_probs=52.7
Q ss_pred ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeech-hhHh-
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHH-SWQR- 119 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~-~~~~- 119 (178)
..|.++.|++|++.++|.. ..|++..-.+ |. ..-+.||+..++.|+. +++|+|.|+|.. ++..
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V~Hsf~ip~~---------~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-VIHGFHVEGT---------NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-SCEEEEETTS---------SC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-ccceEEecCC---------Cc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 3799999999999999973 4444332211 11 1246789888888876 899999999964 2222
Q ss_pred hccEEEEEEEc
Q 035484 120 ASVYGAFIIYP 130 (178)
Q Consensus 120 ~Gl~G~liV~~ 130 (178)
.+|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 38999998864
No 104
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=97.62 E-value=0.0004 Score=52.05 Aligned_cols=74 Identities=15% Similarity=0.220 Sum_probs=56.2
Q ss_pred ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeec-hhhHhh
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAH-HSWQRA 120 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h-~~~~~~ 120 (178)
..|.++.|++|++.++|. +..|++..-++.. +.-+.||+.-+..|.. +++|+|++.|. .++...
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViHsf~IP~lgi-------------k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIHGFHVEGTNI-------------NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCEEEEETTSSC-------------EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-CceEEEEECCCCe-------------EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 479999999999999996 5555544432221 1245689988889976 89999999998 366664
Q ss_pred -ccEEEEEEEc
Q 035484 121 -SVYGAFIIYP 130 (178)
Q Consensus 121 -Gl~G~liV~~ 130 (178)
+|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 9999999974
No 105
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=87.58 E-value=1.4 Score=33.67 Aligned_cols=73 Identities=16% Similarity=0.002 Sum_probs=51.6
Q ss_pred ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeech-hhHhh
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHH-SWQRA 120 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~-~~~~~ 120 (178)
..|.+..|+.|++.+++. +.-|++.+-.+.. +.-+-||..-...|.+ +++|+|+..|.- ++...
T Consensus 41 n~l~lP~g~~V~~~lTS~-DViHSF~IP~lgv-------------K~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~H 105 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVMHSFFIPRLGS-------------QIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGH 105 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSCEEEEEGGGTE-------------EEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTS
T ss_pred ceEEEeCCCEEEEEEecC-CceeeEEecccCc-------------EEEecCCceEEEEEEe-CCCeEEEEEcccccccch
Confidence 478999999999999986 3333333322221 1235578888888865 899999999984 44443
Q ss_pred -ccEEEEEEE
Q 035484 121 -SVYGAFIIY 129 (178)
Q Consensus 121 -Gl~G~liV~ 129 (178)
.|.+.++|.
T Consensus 106 s~M~~~v~vv 115 (205)
T 1cyx_A 106 SGMKFKAIAT 115 (205)
T ss_dssp TTCCEEEEEE
T ss_pred hhceEEEEEE
Confidence 788888887
No 106
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=84.63 E-value=3 Score=33.66 Aligned_cols=75 Identities=12% Similarity=0.043 Sum_probs=51.5
Q ss_pred ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeech-hhHhh
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHH-SWQRA 120 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~-~~~~~ 120 (178)
..+.+..|+.|++.+++. +.-|++..-.+... . -+-||..-...|.+ +++|+|...|.- ++...
T Consensus 189 N~lvlP~g~~V~~~ltS~-DViHsf~iP~lg~k----~---------daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT-DVIHAWTIPAFAVK----Q---------DAVPGRIAQLWFSV-DQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEES-SSCEEEEEGGGTEE----E---------EECTTCCEEEEEEC-SSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeC-CccceeeEcccCce----E---------EecCCceEEEEEEe-CCCEEEEEEcccccCcCc
Confidence 579999999999999984 33444333222211 2 34568888888875 899999999983 44443
Q ss_pred -ccEEEEEEEcC
Q 035484 121 -SVYGAFIIYPR 131 (178)
Q Consensus 121 -Gl~G~liV~~~ 131 (178)
.|.+.+.|.+.
T Consensus 254 s~M~~~v~vvs~ 265 (298)
T 3hb3_B 254 AYMPIVVKAVSQ 265 (298)
T ss_dssp TSCCEEEEEECH
T ss_pred cCCeeEEEEEcH
Confidence 67766666654
No 107
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=83.16 E-value=3.8 Score=32.35 Aligned_cols=75 Identities=11% Similarity=0.010 Sum_probs=51.5
Q ss_pred ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeech-hhHhh
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHH-SWQRA 120 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~-~~~~~ 120 (178)
..+++..|+.|++.+++. +.-|+...-.+... + -+-||+.-...|.+ +++|+|...|.- ++...
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~~k----~---------da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFGVK----Q---------DAVPGRLAQLWFRA-EREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGTEE----E---------EECBTCCEEEEEEC-CSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccCce----E---------EecCCceeEEEEec-CCcEEEEEEChHhcccCc
Confidence 469999999999999976 33444333322211 2 34568888888875 899999999983 44443
Q ss_pred -ccEEEEEEEcC
Q 035484 121 -SVYGAFIIYPR 131 (178)
Q Consensus 121 -Gl~G~liV~~~ 131 (178)
.|.+.+.|.++
T Consensus 236 ~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 AYMPITVKVVSE 247 (262)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 67777776654
No 108
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=76.19 E-value=4.9 Score=31.02 Aligned_cols=75 Identities=7% Similarity=-0.019 Sum_probs=50.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeech-hhHhh
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHH-SWQRA 120 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~-~~~~~ 120 (178)
..+.+..|+.|++.++.. +.-|+...-.+... +| +-||+.-...|.+ +++|+|...|.- ++...
T Consensus 140 n~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg~K----~D---------aiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE-DVLHSWAVPSLGLK----TD---------AIPGRLNQTTLMS-SRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SCEEEETTSCEEEEEEES-SSCEEEEEGGGTEE----EE---------ECTTCCEEEEECC-SSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEeC-cccceeeecccCcE----EE---------ecCCceEEEEEec-CCcEEEEEEehhhccccc
Confidence 679999999999999984 33444433322211 33 3458888888865 899999999973 44443
Q ss_pred -ccEEEEEEEcC
Q 035484 121 -SVYGAFIIYPR 131 (178)
Q Consensus 121 -Gl~G~liV~~~ 131 (178)
-|.+.+.+.++
T Consensus 205 s~M~~~v~vv~~ 216 (227)
T 1v54_B 205 SFMPIVLELVPL 216 (227)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 56666666543
No 109
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=74.66 E-value=6.8 Score=27.22 Aligned_cols=69 Identities=17% Similarity=0.300 Sum_probs=40.1
Q ss_pred EEEcCccCCceEEEecCCEEEEEEE---eCCCCCcceee----cCccccC-CCCCCCCCCccccccCCCCeEEEEEEe
Q 035484 33 LTVNGEYSGLAIAVYEGDNVQIKVT---NRVAQNTTIRW----HGIRQLR-TGWSDGPAYITQCPIKGGQSYTYEFTI 102 (178)
Q Consensus 33 ~~~Ng~~pgp~i~~~~Gd~v~v~~~---N~~~~~~~~H~----HG~~~~~-~~~~DG~~~~~~~~i~pg~~~~y~~~~ 102 (178)
..|+|=-..+.=.+++|+.+.|.+. |.......... .|+..+. ....|+-.+ ..||+.+|+.++|.+..
T Consensus 16 V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 16 VMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp EEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred EEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 4455421455667888988888876 22222222222 3444332 112455433 68999999999998765
No 110
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=74.15 E-value=6.1 Score=27.48 Aligned_cols=69 Identities=25% Similarity=0.319 Sum_probs=40.6
Q ss_pred EEEcCccCCceEEEecCCEEEEEEE---eCCCCCcceeec----CccccC-CCCCCCCCCccccccCCCCeEEEEEEe
Q 035484 33 LTVNGEYSGLAIAVYEGDNVQIKVT---NRVAQNTTIRWH----GIRQLR-TGWSDGPAYITQCPIKGGQSYTYEFTI 102 (178)
Q Consensus 33 ~~~Ng~~pgp~i~~~~Gd~v~v~~~---N~~~~~~~~H~H----G~~~~~-~~~~DG~~~~~~~~i~pg~~~~y~~~~ 102 (178)
..|+|= +.+.=.+++|+.+.|.+. |..........| |+..+- .+..|+-.....||+.+|+.++|.+.+
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~l 94 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKL 94 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEe
Confidence 444441 346667888988888876 333333233333 333321 122455433358999999999998766
No 111
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=72.82 E-value=9.7 Score=31.90 Aligned_cols=14 Identities=29% Similarity=0.242 Sum_probs=13.0
Q ss_pred ccCCCCeEEEEEEe
Q 035484 89 PIKGGQSYTYEFTI 102 (178)
Q Consensus 89 ~i~pg~~~~y~~~~ 102 (178)
||+|||+++.+..+
T Consensus 353 pI~PGETrt~~V~a 366 (419)
T 3rfr_A 353 VIAPGESKEIVVKI 366 (419)
T ss_dssp CBCTTCEEEEEEEE
T ss_pred CcCCCcceEEEEEe
Confidence 99999999999876
No 112
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=65.37 E-value=8.3 Score=25.84 Aligned_cols=53 Identities=19% Similarity=0.205 Sum_probs=32.7
Q ss_pred CEEEEEEEeCCCCC---cceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEe-cccCCc
Q 035484 50 DNVQIKVTNRVAQN---TTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTI-VNQRGT 108 (178)
Q Consensus 50 d~v~v~~~N~~~~~---~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~-~~~~Gt 108 (178)
-.+.|.|+|-++.+ ..++.-|.-. ..+ -......|.||++..+++.. +..+|.
T Consensus 22 l~v~vsf~NPL~~~L~~c~~~vEG~GL-----~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 22 CEVQIVFKNPLPVTLTNVVFRLEGSGL-----QRP-KILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEEECCSSSCBCSEEEEEEETTT-----EEE-EEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEEECCCCCcccCEEEEEECCCC-----Ccc-eEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 35678899999875 3445555322 111 01122369999999998877 345664
No 113
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=63.95 E-value=13 Score=30.88 Aligned_cols=16 Identities=25% Similarity=0.482 Sum_probs=14.0
Q ss_pred ccccCCCCeEEEEEEe
Q 035484 87 QCPIKGGQSYTYEFTI 102 (178)
Q Consensus 87 ~~~i~pg~~~~y~~~~ 102 (178)
..||+|||+++.+..+
T Consensus 319 ~~pI~PGETr~~~v~a 334 (382)
T 1yew_A 319 NSPLAPGETRTVDVTA 334 (382)
T ss_dssp CSCBCTTCEEEEEEEE
T ss_pred CCCcCCCceeEEEEEe
Confidence 4589999999999876
No 114
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=63.06 E-value=34 Score=23.57 Aligned_cols=69 Identities=13% Similarity=0.272 Sum_probs=44.3
Q ss_pred cCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCC---ccccccCCCCeEEEEEEecc--cCCceE
Q 035484 36 NGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAY---ITQCPIKGGQSYTYEFTIVN--QRGTLL 110 (178)
Q Consensus 36 Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~---~~~~~i~pg~~~~y~~~~~~--~~Gt~~ 110 (178)
|-.--.=++....|.+..+.+.+.... ..| .|++|... .....++||++.+|+...++ .+|+|.
T Consensus 28 N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Yt 96 (120)
T 3isy_A 28 NQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYE 96 (120)
T ss_dssp ECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEE
T ss_pred cCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEE
Confidence 433334577777888888887775321 122 35666432 23447999999999998853 578887
Q ss_pred Eeech
Q 035484 111 WHAHH 115 (178)
Q Consensus 111 yH~h~ 115 (178)
.+.-.
T Consensus 97 l~a~l 101 (120)
T 3isy_A 97 VKVTF 101 (120)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66543
No 115
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=58.47 E-value=12 Score=26.57 Aligned_cols=33 Identities=3% Similarity=-0.054 Sum_probs=26.0
Q ss_pred EEEecccCCceEEeechhhHhh-ccEEEEEEEcC
Q 035484 99 EFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 99 ~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
.+++....|++||-|-..+|=. ||-..+.|...
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~ 109 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVAA 109 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEECC
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcCC
Confidence 3444257899999999877765 99999999866
No 116
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=55.83 E-value=17 Score=25.39 Aligned_cols=46 Identities=17% Similarity=0.266 Sum_probs=24.2
Q ss_pred EEEEEeCCCCCcce---eecCccccCCC---CCCCCCCccccccCCCCeEEEE
Q 035484 53 QIKVTNRVAQNTTI---RWHGIRQLRTG---WSDGPAYITQCPIKGGQSYTYE 99 (178)
Q Consensus 53 ~v~~~N~~~~~~~~---H~HG~~~~~~~---~~DG~~~~~~~~i~pg~~~~y~ 99 (178)
+|++.|....+.-+ ||.=.+....- .-+|+-| .|..|.||+++.|.
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~Yt 85 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVG-EQPWLRPGEAFHYT 85 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTT-BCCEECTTCEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEe
Confidence 46667777665433 66433321100 0234332 25568999987774
No 117
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=53.44 E-value=16 Score=25.51 Aligned_cols=46 Identities=28% Similarity=0.340 Sum_probs=23.7
Q ss_pred EEEEEeCCCCCcce---eecCccccCCC---CCCCCCCccccccCCCCeEEEE
Q 035484 53 QIKVTNRVAQNTTI---RWHGIRQLRTG---WSDGPAYITQCPIKGGQSYTYE 99 (178)
Q Consensus 53 ~v~~~N~~~~~~~~---H~HG~~~~~~~---~~DG~~~~~~~~i~pg~~~~y~ 99 (178)
+|++.|....+.-+ ||.=.+....- .-+|+-| .|..|.||+++.|.
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~Yt 84 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVG-EQPRIKANDEYTYS 84 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTT-BCCEECTTCEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEc-CCCcCCCCCceEEe
Confidence 46667777655433 66433321100 0233322 24568999977775
No 118
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=47.07 E-value=25 Score=24.98 Aligned_cols=46 Identities=15% Similarity=0.244 Sum_probs=23.8
Q ss_pred EEEEEeCCCCCcce---eecCccccCCC---CCCCCCCccccccCCCCeEEEE
Q 035484 53 QIKVTNRVAQNTTI---RWHGIRQLRTG---WSDGPAYITQCPIKGGQSYTYE 99 (178)
Q Consensus 53 ~v~~~N~~~~~~~~---H~HG~~~~~~~---~~DG~~~~~~~~i~pg~~~~y~ 99 (178)
.|++.|....+.-+ ||.=.+....- .-+|+-| .|..|.||+++.|.
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVG-eqPvL~PGe~F~Yt 89 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVG-QQPLLAPGETFEYT 89 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSS-CCCEECTTCEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEc
Confidence 46667777655433 66433221100 0233322 25568999987775
No 119
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=45.58 E-value=14 Score=30.66 Aligned_cols=58 Identities=16% Similarity=0.197 Sum_probs=45.3
Q ss_pred EEEcCccCCceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEE
Q 035484 33 LTVNGEYSGLAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYE 99 (178)
Q Consensus 33 ~~~Ng~~pgp~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~ 99 (178)
--+||++++-.+.++.|.++.+++.-..-.|=.-|.|=+... .|+.| .|.||+..+.+
T Consensus 71 ~~ing~~~~~s~~le~G~~Y~fki~lkAR~PG~~HVH~~lNV----~~~GP-----iiGPG~~v~I~ 128 (382)
T 1yew_A 71 SYIGGQLVPRSVRLEIGKTYDFRVVLKARRPGDWHVHTMMNV----QGGGP-----IIGPGKWITVE 128 (382)
T ss_dssp EEETTEECSSCBCCCTTCEEEEEEEEEECSCEEEEEEEEEEE----SSSCB-----CCCCEEEEEEE
T ss_pred hhhcCcCCCceEEecCCCeEeEEEEEecccCccccceeeEee----cCCCC-----CcCCceEEEEe
Confidence 457888888899999999999999999999999999886532 55554 46677666554
No 120
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=43.86 E-value=22 Score=25.07 Aligned_cols=46 Identities=17% Similarity=0.196 Sum_probs=23.6
Q ss_pred EEEEEeCCCCCcce---eecCccccCCC---CCCCCCCccccccCCCCeEEEE
Q 035484 53 QIKVTNRVAQNTTI---RWHGIRQLRTG---WSDGPAYITQCPIKGGQSYTYE 99 (178)
Q Consensus 53 ~v~~~N~~~~~~~~---H~HG~~~~~~~---~~DG~~~~~~~~i~pg~~~~y~ 99 (178)
.|++.|....+.-+ ||.=.+....- .-+|+-| .|..|.||++|.|.
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-eqP~L~PGe~F~Yt 84 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVG-ETPTIPPNTAYQYT 84 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTT-BCCEECTTEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEc-CCCcCCCCCceEEc
Confidence 46667777655433 66433221100 0233322 24568999977775
No 121
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=43.67 E-value=21 Score=28.91 Aligned_cols=73 Identities=16% Similarity=-0.014 Sum_probs=49.7
Q ss_pred ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeech-hhHhh
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHH-SWQRA 120 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~-~~~~~ 120 (178)
..+++..|+.|++.++.. +.-|++..-.+... + -+-||..-...|.+ +++|+|...|.- ++...
T Consensus 151 n~l~lP~g~~V~~~lTS~-DViHsf~IP~lg~k----~---------DaiPGr~n~~~~~~-~~~G~y~g~CsE~CG~~H 215 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN-SVMNSFFIPRLGSQ----I---------YAMAGMQTRLHLIA-NEPGTYDGISASYSGPGF 215 (315)
T ss_dssp SBCCCCSSSEEEEEECBS-SSCEEEEEGGGTEE----E---------EECBTSCEEEEEEC-CSCBCCEEBCCSCCSTTT
T ss_pred ceEEEeCCCEEEEEEEeC-CccceeeecccCcE----E---------eecCCcceeeEEec-CCCeEEEEeccccchhhH
Confidence 468899999999998865 33444443322211 2 24568888888875 899999999973 44443
Q ss_pred -ccEEEEEEE
Q 035484 121 -SVYGAFIIY 129 (178)
Q Consensus 121 -Gl~G~liV~ 129 (178)
.|.+-++|.
T Consensus 216 s~M~~~v~vv 225 (315)
T 1fft_B 216 SGMKFKAIAT 225 (315)
T ss_dssp TTCCEECCBC
T ss_pred HhccceEEEe
Confidence 677777776
No 122
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=40.04 E-value=13 Score=26.20 Aligned_cols=17 Identities=18% Similarity=0.407 Sum_probs=15.8
Q ss_pred eEEEecCCEEEEEEEeC
Q 035484 43 AIAVYEGDNVQIKVTNR 59 (178)
Q Consensus 43 ~i~~~~Gd~v~v~~~N~ 59 (178)
.|.++.|++|++.+.|.
T Consensus 72 ~InV~~GETVrF~v~nk 88 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEK 88 (131)
T ss_dssp EEEEETTCEEEEEETTE
T ss_pred EEEecCCCEEEEEeCCc
Confidence 49999999999999988
No 123
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=38.47 E-value=11 Score=25.06 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=20.9
Q ss_pred EEEEEEcCccCCceEEEecCCEEEEE
Q 035484 30 LLLLTVNGEYSGLAIAVYEGDNVQIK 55 (178)
Q Consensus 30 ~~~~~~Ng~~pgp~i~~~~Gd~v~v~ 55 (178)
.. ..+||++-.+.-.++.||+|+|-
T Consensus 59 ~~-V~Vng~~v~~d~~L~dGDRVEIy 83 (97)
T 2hj1_A 59 NK-IGIFSRPIKLTDVLKEGDRIEIY 83 (97)
T ss_dssp SE-EEEEECSCCTTCBCCTTCEEEEC
T ss_pred cE-EEEcCEECCCCccCCCCCEEEEE
Confidence 44 89999887788889999999983
No 124
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=38.29 E-value=25 Score=23.95 Aligned_cols=32 Identities=6% Similarity=0.032 Sum_probs=25.7
Q ss_pred EEEecccCCceEEeechhhHhh-ccEEEE-EEEcC
Q 035484 99 EFTIVNQRGTLLWHAHHSWQRA-SVYGAF-IIYPR 131 (178)
Q Consensus 99 ~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~l-iV~~~ 131 (178)
.+++ ..+|.+||-|-...|=. ||-..+ .|...
T Consensus 73 ~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 73 KIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred EEEE-CCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 5555 78999999999877755 999999 88766
No 125
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=34.89 E-value=17 Score=22.33 Aligned_cols=24 Identities=17% Similarity=0.400 Sum_probs=19.9
Q ss_pred EEEEEEcCcc-CCceEEEecCCEEEE
Q 035484 30 LLLLTVNGEY-SGLAIAVYEGDNVQI 54 (178)
Q Consensus 30 ~~~~~~Ng~~-pgp~i~~~~Gd~v~v 54 (178)
.. +.+||.+ ++..-.++.||+|.|
T Consensus 43 ~~-vavN~~~v~~~~~~l~~gDeV~i 67 (74)
T 3rpf_C 43 CA-IALNDHLIDNLNTPLKDGDVISL 67 (74)
T ss_dssp CE-EEESSSEECCTTCCCCTTCEEEE
T ss_pred cE-EEECCEEcCCCCcCCCCCCEEEE
Confidence 44 8999998 887778999999876
No 126
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=34.10 E-value=26 Score=29.37 Aligned_cols=43 Identities=12% Similarity=0.206 Sum_probs=27.4
Q ss_pred CCCCCCCccccccCCCCeEEEEEEe-cccCCceEEeechhhHhh
Q 035484 78 WSDGPAYITQCPIKGGQSYTYEFTI-VNQRGTLLWHAHHSWQRA 120 (178)
Q Consensus 78 ~~DG~~~~~~~~i~pg~~~~y~~~~-~~~~Gt~~yH~h~~~~~~ 120 (178)
|..|.|......+..|+.+.|+..+ +..+|+|.-|.-..-+..
T Consensus 100 ~ing~p~~~s~~l~~G~~Y~fki~lkaR~PG~~HVH~~lNV~~~ 143 (419)
T 3rfr_A 100 FIGEQFAPRSVSLEIGKDYAFSINLRGRRAGRWHVHAQINVEGG 143 (419)
T ss_dssp EETTEECSSCBCCCTTCEEEEEEEEEECSCEEEEEEEEEEETTT
T ss_pred hhcCcCCcceEEecCCCeEeEEEEEecccCcccccceeEeeccC
Confidence 3444444334578899999888766 478999855554443333
No 127
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=30.85 E-value=1.2e+02 Score=21.07 Aligned_cols=64 Identities=20% Similarity=0.260 Sum_probs=39.1
Q ss_pred eEEEecC-CEEEEEEEeCCCCCcce--eecCccccCCCCCC-----C----CCCccccccCCCCeEEEEEEecccCCc
Q 035484 43 AIAVYEG-DNVQIKVTNRVAQNTTI--RWHGIRQLRTGWSD-----G----PAYITQCPIKGGQSYTYEFTIVNQRGT 108 (178)
Q Consensus 43 ~i~~~~G-d~v~v~~~N~~~~~~~~--H~HG~~~~~~~~~D-----G----~~~~~~~~i~pg~~~~y~~~~~~~~Gt 108 (178)
.|.+.+| .++++.|.|..+-|.-+ |+|=......-..| | .|.-|..-..||++++.++. .-.|.
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV--~~~G~ 93 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT--ELGGN 93 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE--ECCTT
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE--EccCC
Confidence 4666776 78999999999876544 55533322100011 2 34445556789999998873 34444
No 128
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=30.85 E-value=1.2e+02 Score=21.07 Aligned_cols=64 Identities=20% Similarity=0.260 Sum_probs=39.1
Q ss_pred eEEEecC-CEEEEEEEeCCCCCcce--eecCccccCCCCCC-----C----CCCccccccCCCCeEEEEEEecccCCc
Q 035484 43 AIAVYEG-DNVQIKVTNRVAQNTTI--RWHGIRQLRTGWSD-----G----PAYITQCPIKGGQSYTYEFTIVNQRGT 108 (178)
Q Consensus 43 ~i~~~~G-d~v~v~~~N~~~~~~~~--H~HG~~~~~~~~~D-----G----~~~~~~~~i~pg~~~~y~~~~~~~~Gt 108 (178)
.|.+.+| .++++.|.|..+-|.-+ |+|=......-..| | .|.-|..-..||++++.++. .-.|.
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV--~~~G~ 93 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT--ELGGN 93 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE--ECCTT
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE--EccCC
Confidence 4666776 78999999999876544 55533322100011 2 34445556789999998873 34444
No 129
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=27.11 E-value=46 Score=22.31 Aligned_cols=32 Identities=9% Similarity=0.103 Sum_probs=25.3
Q ss_pred EEEecccCCceEEeechhhHhh-ccEEEEEEEcC
Q 035484 99 EFTIVNQRGTLLWHAHHSWQRA-SVYGAFIIYPR 131 (178)
Q Consensus 99 ~~~~~~~~Gt~~yH~h~~~~~~-Gl~G~liV~~~ 131 (178)
.+++ ..+|++||-|-...|=. ||-..+.|...
T Consensus 73 ~v~L-~~~G~~yFic~~~gHC~~GmKl~I~V~~~ 105 (109)
T 1ws8_A 73 SIPL-KRPGTFYFLCGIPGHCQLGQKVEIKVDPG 105 (109)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEECC-
T ss_pred EEEE-CCCcCEEEECCCCCcccCCCEEEEEEcCC
Confidence 5666 78999999998877755 99988888654
No 130
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.06 E-value=38 Score=22.05 Aligned_cols=56 Identities=5% Similarity=-0.058 Sum_probs=31.9
Q ss_pred CEEEEEEEeCCCCCcceeecCccccCCCCCCCC--CCccccccCCCCeEEEEEEe-cccCCce
Q 035484 50 DNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGP--AYITQCPIKGGQSYTYEFTI-VNQRGTL 109 (178)
Q Consensus 50 d~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~--~~~~~~~i~pg~~~~y~~~~-~~~~Gt~ 109 (178)
.+..+.+.|....+..+++.= .... ..+. ...+..+|.||++....... +.+.|.|
T Consensus 28 ~~~~~~l~N~g~~p~~~~~~~--~~~~--~~~~f~v~p~~g~i~pg~~~~i~V~f~~~~~g~f 86 (112)
T 2e6j_A 28 HCYEAILYNKGSIDALFNMTP--PTSA--LGACFVFSPKEGIIEPSGVQAIQISFSSIILGNF 86 (112)
T ss_dssp EEEEEEEEECCSSCEEEEECC--CSSH--HHHHCEEESSEEEECTTBCCEEEEEECCCCCEEE
T ss_pred EEEEEEEEECCcceEEEEEec--CCcc--ccCcEEEECCcCEECCCCEEEEEEEEECCCcceE
Confidence 345689999999988888731 0000 0000 00123479999888776655 2445543
No 131
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=25.81 E-value=37 Score=20.61 Aligned_cols=23 Identities=22% Similarity=0.281 Sum_probs=18.7
Q ss_pred EEEEEcCccCCceEEEecCCEEEE
Q 035484 31 LLLTVNGEYSGLAIAVYEGDNVQI 54 (178)
Q Consensus 31 ~~~~~Ng~~pgp~i~~~~Gd~v~v 54 (178)
. +.+||++-...-.++.||+|.|
T Consensus 48 ~-v~vNg~~v~~~~~L~~gD~V~i 70 (77)
T 2q5w_D 48 Q-VAVNEEFVQKSDFIQPNDTVAL 70 (77)
T ss_dssp E-EEETTEEECTTSEECTTCEEEE
T ss_pred E-EEECCEECCCCCCcCCCCEEEE
Confidence 5 8999987655678999999877
No 132
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=25.16 E-value=1e+02 Score=27.70 Aligned_cols=55 Identities=20% Similarity=0.172 Sum_probs=34.3
Q ss_pred EEEEEEEeCCCCC---cceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEe-cccCCceE
Q 035484 51 NVQIKVTNRVAQN---TTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTI-VNQRGTLL 110 (178)
Q Consensus 51 ~v~v~~~N~~~~~---~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~-~~~~Gt~~ 110 (178)
.+.|.|+|.++++ ..++.-|.-. ..+.--.....|.||++...++.+ +..+|.--
T Consensus 611 ~v~v~f~NPL~~~L~~c~~~vEG~GL-----~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~r~ 669 (692)
T 1vjj_A 611 NVQMLFSNPLDEPVRDCVLMVEGSGL-----LLGNLKIDVPTLGPKERSRVRFDILPSRSGTKQ 669 (692)
T ss_dssp EEEEEEECCSSSCBCSEEEEEECTTT-----SSSCEEEEECCBCTTCEEEEEEEECCCSCEEEE
T ss_pred EEEEEEECCCCCcccceEEEEECCCC-----CCCceEEEcCccCCCCEEEEEEEEEeccccceE
Confidence 4578889999875 3455555332 222111223479999999998877 45666543
No 133
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=24.52 E-value=1.6e+02 Score=21.21 Aligned_cols=28 Identities=18% Similarity=0.268 Sum_probs=21.6
Q ss_pred CceEEEecCCEEEE------EEEeCCCCCcceee
Q 035484 41 GLAIAVYEGDNVQI------KVTNRVAQNTTIRW 68 (178)
Q Consensus 41 gp~i~~~~Gd~v~v------~~~N~~~~~~~~H~ 68 (178)
+-...++.||.+.+ .++|....+..++|
T Consensus 127 g~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~ 160 (166)
T 2vpv_A 127 KNKFLSVKGSTFQIPAFNEYAIANRGNDEAKMFF 160 (166)
T ss_dssp TEEEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred CEEEEEcCCCEEEECCCCCEEEEECCCCCEEEEE
Confidence 45778888888777 57888888877776
No 134
>2wnv_C C1Q chain C, complement C1Q subcomponent subunit C; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_C 2wnu_C* 2jg9_C* 1pk6_C
Probab=24.51 E-value=56 Score=22.36 Aligned_cols=16 Identities=19% Similarity=0.380 Sum_probs=14.4
Q ss_pred ceEEEecCCEEEEEEE
Q 035484 42 LAIAVYEGDNVQIKVT 57 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~ 57 (178)
-+|.+++||+|.|.+.
T Consensus 93 ~~L~L~~GD~V~v~~~ 108 (131)
T 2wnv_C 93 VLLRLQVGEEVWLAVN 108 (131)
T ss_dssp EEEEECTTCEEEEEEE
T ss_pred EEEEECCCCEEEEEEe
Confidence 5889999999999985
No 135
>2wnv_A C1Q chain A, complement C1Q subcomponent subunit A; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_A 2wnu_A* 2jg9_A* 1pk6_A
Probab=24.46 E-value=60 Score=22.25 Aligned_cols=17 Identities=18% Similarity=0.427 Sum_probs=15.0
Q ss_pred ceEEEecCCEEEEEEEe
Q 035484 42 LAIAVYEGDNVQIKVTN 58 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N 58 (178)
-+|.+++||+|.|.+..
T Consensus 94 ~~L~L~~GD~V~l~~~~ 110 (134)
T 2wnv_A 94 MVLQLQQGDQVWVEKDP 110 (134)
T ss_dssp EEEEECTTCEEEEEEEE
T ss_pred EEEEECCCCEEEEEEeC
Confidence 58999999999999854
No 136
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=24.46 E-value=1.8e+02 Score=20.08 Aligned_cols=22 Identities=23% Similarity=0.431 Sum_probs=18.2
Q ss_pred CCceEEEecCCEEEEEEEeCCC
Q 035484 40 SGLAIAVYEGDNVQIKVTNRVA 61 (178)
Q Consensus 40 pgp~i~~~~Gd~v~v~~~N~~~ 61 (178)
-+-+|.++.|+++.|.+.-+-+
T Consensus 31 n~~~I~v~~Ge~~~I~L~~NPT 52 (131)
T 2h7w_A 31 NGATLTVAVGELVEIQLPSNPT 52 (131)
T ss_dssp TTCEEEECTTCEEEEEEEECGG
T ss_pred CCCEEEEeCCCEEEEEeCCCCC
Confidence 3669999999999999976543
No 137
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=24.11 E-value=1.6e+02 Score=19.54 Aligned_cols=64 Identities=19% Similarity=0.164 Sum_probs=38.5
Q ss_pred eEEEecC-CEEEEEEEeCCCCCcce--eecCccccCCCC-----CCC----CCCccccccCCCCeEEEEEEecccCCc
Q 035484 43 AIAVYEG-DNVQIKVTNRVAQNTTI--RWHGIRQLRTGW-----SDG----PAYITQCPIKGGQSYTYEFTIVNQRGT 108 (178)
Q Consensus 43 ~i~~~~G-d~v~v~~~N~~~~~~~~--H~HG~~~~~~~~-----~DG----~~~~~~~~i~pg~~~~y~~~~~~~~Gt 108 (178)
.|.+.+| +++.+.|.|..+-|.-+ |.|=......-. +-| .|.-|..-..||++++.++. .-.|.
T Consensus 12 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV--~~~G~ 87 (101)
T 4ep8_B 12 QIALNTGRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELV--AFAGH 87 (101)
T ss_dssp EEECSTTCCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEE--ECCTT
T ss_pred cEEEcCCCCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEE--EccCc
Confidence 4666666 78999999999876544 554332211000 112 34445556789999998873 34443
No 138
>4ajy_V VON hippel-lindau disease tumor suppressor; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 3zrc_C 3zrf_C* 3ztc_C* 3zun_C 4awj_C* 1lqb_C 3ztd_C* 4b95_C* 1lm8_V 1vcb_C 4b9k_C*
Probab=23.39 E-value=1e+02 Score=22.34 Aligned_cols=44 Identities=16% Similarity=0.175 Sum_probs=31.1
Q ss_pred ecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEE
Q 035484 47 YEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYE 99 (178)
Q Consensus 47 ~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~ 99 (178)
..+..+.|.|.|.++.+.-+-|-. .+|.+ ....-+.||+++...
T Consensus 17 ~S~~~~~V~FvN~s~~~V~v~WID--------y~G~~-~~Y~tL~PG~~~~~~ 60 (163)
T 4ajy_V 17 NSREPSQVIFCNRSPRVVLPVWLN--------FDGEP-QPYPTLPPGTGRRIH 60 (163)
T ss_dssp CCCCEEEEEEEECSSSCEEEEEEC--------TTSCE-EECCCBCTTEEEEEE
T ss_pred CCCceEEEEEEeCCCCeEEEEEEC--------CCCCE-EEeeeeCCCCeEEec
Confidence 457889999999999999999833 23331 122368899887654
No 139
>2wnv_B C1Q chain B, complement C1Q subcomponent subunit B; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_B 2wnu_B* 2jg9_B* 1pk6_B
Probab=22.98 E-value=62 Score=22.31 Aligned_cols=17 Identities=24% Similarity=0.571 Sum_probs=14.9
Q ss_pred ceEEEecCCEEEEEEEe
Q 035484 42 LAIAVYEGDNVQIKVTN 58 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N 58 (178)
-+|.+++||+|.|.+..
T Consensus 95 ~~L~L~~GD~V~v~~~~ 111 (136)
T 2wnv_B 95 MVLKLEQGENVFLQATD 111 (136)
T ss_dssp EEEEECTTCEEEEEEEE
T ss_pred EEEEECCCCEEEEEEeC
Confidence 58999999999999853
No 140
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=22.87 E-value=1.1e+02 Score=23.80 Aligned_cols=49 Identities=22% Similarity=0.219 Sum_probs=30.7
Q ss_pred ceEEEecCCEEEEEEEeCCCC------CcceeecCccccCCCCCCCCCCccccccCCCCeEE
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQ------NTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYT 97 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~------~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~ 97 (178)
.+|+.+-|-++.|.+.|..+. +.++..-|..... +.-++.-+.||++++
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~-------~aG~~i~L~PGESiT 183 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKH-------TAGSQLRLSPGESIC 183 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEE-------CTTCEEEECTTCEEE
T ss_pred ccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEe-------CCCCEEEECCCCeEe
Confidence 788888888889999888654 3344433333221 112344678898876
No 141
>2yev_B Cytochrome C oxidase subunit 2; electron transport; HET: FME 5PL HAS 4AG 7E8 HEC 7E9; 2.36A {Thermus thermophilus}
Probab=27.79 E-value=19 Score=29.23 Aligned_cols=73 Identities=12% Similarity=0.132 Sum_probs=42.5
Q ss_pred ceEEEecCCEEEEEEEeCCCCCcceeecCccccCCCCCCCCCCccccccCCCCeEEEEEEecccCCceEEeech-hhHhh
Q 035484 42 LAIAVYEGDNVQIKVTNRVAQNTTIRWHGIRQLRTGWSDGPAYITQCPIKGGQSYTYEFTIVNQRGTLLWHAHH-SWQRA 120 (178)
Q Consensus 42 p~i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~~~~~Gt~~yH~h~-~~~~~ 120 (178)
..+++..|+.|++.++.. +.-|++..-.+.. .+| +-||..-...|.+ +++|+|...|.- ++...
T Consensus 141 n~l~~P~~~~v~~~~ts~-DViHsf~vp~~~~----k~d---------~~PG~~~~~~~~~-~~~G~y~g~c~e~cG~~H 205 (337)
T 2yev_B 141 NELVLPAGVPVELEITSK-DVIHSFWVPGLAG----KRD---------AIPGQTTRISFEP-KEPGLYYGFCAELCGASH 205 (337)
Confidence 457888888888888753 2223322222211 133 3457777778865 899999999873 33332
Q ss_pred -ccEEEEEEE
Q 035484 121 -SVYGAFIIY 129 (178)
Q Consensus 121 -Gl~G~liV~ 129 (178)
.|...+.+.
T Consensus 206 s~M~~~v~~v 215 (337)
T 2yev_B 206 ARMLFRVVVL 215 (337)
Confidence 444444433
No 142
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=22.02 E-value=1.4e+02 Score=26.73 Aligned_cols=56 Identities=11% Similarity=0.176 Sum_probs=34.8
Q ss_pred EEEEEEEeCCCCC---cceeecCccccCCCCCCCCCCccc-cccCCCCeEEEEEEe-cccCCceEE
Q 035484 51 NVQIKVTNRVAQN---TTIRWHGIRQLRTGWSDGPAYITQ-CPIKGGQSYTYEFTI-VNQRGTLLW 111 (178)
Q Consensus 51 ~v~v~~~N~~~~~---~~~H~HG~~~~~~~~~DG~~~~~~-~~i~pg~~~~y~~~~-~~~~Gt~~y 111 (178)
.+.|.|+|.++++ ..++.-|.-. ..+.--... ..|.||++.+..+.+ +..+|..-.
T Consensus 604 ~v~v~f~NPL~~~L~~c~~~vEG~GL-----~~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L 664 (687)
T 2q3z_A 604 VAEVSLQNPLPVALEGCTFTVEGAGL-----TEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKL 664 (687)
T ss_dssp EEEEEEECCSSSCBCSEEEEEECTTT-----CSSCEEEEECSCBCTTCEEEEEEEECCCSSSCEEE
T ss_pred EEEEEEECCCCCcccceEEEEECCCC-----CCCceEEecCCCcCCCCEEEEEEEEEeccccceEE
Confidence 3578889999875 4455555432 222111122 369999999998877 456776433
No 143
>1fm0_D Molybdopterin convertin factor, subunit 1; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.15.3.1 PDB: 1fma_D 1jw9_D 1jwa_D* 1jwb_D* 3bii_D 1nvi_D
Probab=21.09 E-value=42 Score=20.55 Aligned_cols=22 Identities=23% Similarity=0.360 Sum_probs=18.0
Q ss_pred EEEcCccCCceEEEecCCEEEE
Q 035484 33 LTVNGEYSGLAIAVYEGDNVQI 54 (178)
Q Consensus 33 ~~~Ng~~pgp~i~~~~Gd~v~v 54 (178)
+.+||++-+..-.++.||+|.|
T Consensus 53 v~vN~~~v~~~~~l~~gD~V~i 74 (81)
T 1fm0_D 53 AAVNQTLVSFDHPLTDGDEVAF 74 (81)
T ss_dssp EEETTEECCTTCBCCTTCEEEE
T ss_pred EEECCEECCCCCCCCCCCEEEE
Confidence 8899987766677889998876
No 144
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=20.84 E-value=39 Score=20.47 Aligned_cols=25 Identities=16% Similarity=0.377 Sum_probs=19.0
Q ss_pred EEEEEEcCccCCceEEEecCCEEEEE
Q 035484 30 LLLLTVNGEYSGLAIAVYEGDNVQIK 55 (178)
Q Consensus 30 ~~~~~~Ng~~pgp~i~~~~Gd~v~v~ 55 (178)
.+ ..+||.+-.+.-.++.||+|.|-
T Consensus 40 v~-vavN~~~v~~~~~L~~gD~V~ii 64 (70)
T 1ryj_A 40 VV-VKKNGQIVIDEEEIFDGDIIEVI 64 (70)
T ss_dssp EE-EEETTEECCTTSBCCTTCEEEEE
T ss_pred EE-EEECCEECCCcccCCCCCEEEEE
Confidence 45 89999875544489999998873
No 145
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.76 E-value=1.8e+02 Score=19.14 Aligned_cols=57 Identities=16% Similarity=0.088 Sum_probs=36.5
Q ss_pred EEEecCCEEEEEEEeCCCCCcceeecCcc-ccCCCCCCCCCCccccccCCCCeEEEEEEe-cccCCc
Q 035484 44 IAVYEGDNVQIKVTNRVAQNTTIRWHGIR-QLRTGWSDGPAYITQCPIKGGQSYTYEFTI-VNQRGT 108 (178)
Q Consensus 44 i~~~~Gd~v~v~~~N~~~~~~~~H~HG~~-~~~~~~~DG~~~~~~~~i~pg~~~~y~~~~-~~~~Gt 108 (178)
..+..-.+..+.++|....+..++|+-.. +... | +...+.||++...+... +..+|.
T Consensus 37 ~~v~~~~~~~~~l~N~g~~~~~f~~~~~~~F~i~------P--~~g~L~pg~~~~i~V~F~P~~~g~ 95 (122)
T 2ys4_A 37 CPVKYSTQKILLVRNIGNKNAVFHIKTCRPFSIE------P--AIGTLNVGESMQLEVEFEPQSVGD 95 (122)
T ss_dssp EESSSCEEEEEEEECCSSSCEEEEEECCTTEEEE------S--SEEEECTTCEEEEEEEECCSSSBC
T ss_pred eecCCeEEEEEEEEECCCCCEEEEEecCCCeEEE------C--CcCEECCCCEEEEEEEEEcCCCcc
Confidence 34445566788999999999888887521 1111 1 13468899998776655 244554
No 146
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=20.09 E-value=2.2e+02 Score=19.45 Aligned_cols=54 Identities=20% Similarity=0.198 Sum_probs=28.7
Q ss_pred ecCCEE--EEEEEeCCCCCcceeecCccccCCCCCCC-CC--CccccccCCCCeEE--EEEEe
Q 035484 47 YEGDNV--QIKVTNRVAQNTTIRWHGIRQLRTGWSDG-PA--YITQCPIKGGQSYT--YEFTI 102 (178)
Q Consensus 47 ~~Gd~v--~v~~~N~~~~~~~~H~HG~~~~~~~~~DG-~~--~~~~~~i~pg~~~~--y~~~~ 102 (178)
.+|+.+ .++|+|.......- +.+.+....-..| .. ..+-..|.+|++.+ +.|.+
T Consensus 13 ~~g~~vTvsatVkN~Gt~~s~a--~~V~~yl~~p~~gg~~vgt~tv~~LaaG~s~t~~v~~~~ 73 (122)
T 2kut_A 13 FEGEEITVSARVTNRGAAEAHN--VPVAVYLGNPAQGGVEIGRDTISRIPVGGTGLARVQWKA 73 (122)
T ss_dssp CTTCEEEEEEEEECCSSSCBCC--CCEEECSSCTTTCCCCCBCCCCSCBCTTCEEECCEEEEC
T ss_pred CCCCeEEEEEEEEeCCCcccCc--EEEEEEeCCCccCCeEEeeEEccccCCCCeEEEEEEEec
Confidence 345554 56779998765542 4444432110011 11 11223789999999 56554
Done!