Query 035485
Match_columns 93
No_of_seqs 114 out of 744
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 04:45:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035485.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035485hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n89_A Lipid transfer protein; 99.9 1.2E-22 4.1E-27 120.1 2.1 67 27-93 1-67 (67)
2 1l6h_A LTP2, non-specific lipi 99.8 1.3E-22 4.4E-27 120.6 -0.1 67 27-93 2-68 (69)
3 2rkn_A DIR1 protein, AT5G48485 99.7 4.5E-19 1.5E-23 106.9 1.5 69 25-93 2-77 (77)
4 2ljo_A Non-specific lipid-tran 99.6 1.5E-17 5.2E-22 103.7 -0.0 67 25-91 1-79 (93)
5 2alg_A Non-specific lipid tran 99.6 3.5E-17 1.2E-21 101.7 -0.8 65 26-91 2-79 (92)
6 1bwo_A NS-LTP1, nonspecific li 99.6 2.3E-16 7.9E-21 97.7 -0.1 63 26-91 1-78 (90)
7 1siy_A LTP 1, NS-LTP1, nonspec 99.5 6.6E-16 2.3E-20 95.7 0.8 63 26-91 1-78 (91)
8 1afh_A Maize nonspecific lipid 99.5 9.3E-16 3.2E-20 95.4 0.1 66 25-91 1-80 (93)
9 1t12_A LTP 1, nonspecific lipi 99.5 1.8E-15 6.3E-20 93.8 -0.5 63 25-91 1-78 (91)
10 1hyp_A Hydrophobic protein fro 92.5 0.059 2E-06 32.2 1.9 62 25-91 5-72 (80)
11 1s6d_A Albumin 8; all helix, f 92.1 0.099 3.4E-06 32.4 2.6 61 33-93 21-101 (103)
12 2lvf_A 2S albumin; allergen, c 89.6 0.043 1.5E-06 34.6 -0.9 62 32-93 17-105 (114)
13 2ds2_B Sweet protein mabinlin- 88.7 0.076 2.6E-06 30.9 -0.2 46 48-93 8-67 (72)
14 1pnb_B Napin BNIB; napin IA an 86.0 0.06 2E-06 31.5 -1.7 49 45-93 9-70 (75)
15 3ob4_A Conglutin, maltose ABC 85.4 0.11 3.8E-06 39.1 -0.9 46 48-93 429-488 (500)
16 1sm7_A Recombinant IB pronapin 84.4 0.13 4.4E-06 32.0 -0.8 62 32-93 14-104 (109)
17 1w2q_A Conglutin, ARA H 6; all 83.1 0.48 1.6E-05 30.4 1.5 60 32-91 24-114 (127)
18 1psy_A 2S albumin, RICC3; albu 81.4 0.27 9.3E-06 31.4 -0.2 57 32-88 26-116 (125)
19 1b1u_A Protein (alpha-amylase/ 62.5 1.4 4.7E-05 28.1 -0.3 61 32-92 16-109 (122)
20 1bea_A Bifunctional amylase/se 59.2 3.1 0.0001 26.6 0.9 60 32-91 16-109 (127)
21 1hss_A 0.19 alpha-amylase inhi 20.6 18 0.00062 22.9 -0.3 60 32-91 16-104 (124)
No 1
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.85 E-value=1.2e-22 Score=120.07 Aligned_cols=67 Identities=43% Similarity=0.947 Sum_probs=61.9
Q ss_pred ccCcCCcccChhhhcCCCCCChhhHHhhhhccccccccccCcccccCCChHHHHHhhcccCCCCCCC
Q 035485 27 TCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93 (93)
Q Consensus 27 ~C~~~~L~~C~~~v~~~~~Ps~~CC~~v~~~~~C~C~~ik~~~~~~~~~~~~a~~Lp~~Cgv~~p~C 93 (93)
+|+.++|.||++|++++++||++||++||++..|+|+|+|++.+..+||.++|.+||++||+++|+|
T Consensus 1 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P~C 67 (67)
T 1n89_A 1 ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC 67 (67)
T ss_dssp CCCSSTTHHHHHHHTTCCCCCHHHHHHHHHHSSHHHHGGGCSTTHHHHTCHHHHHHHHHHTSCCSCC
T ss_pred CCChhhcccCHHHHcCCCCCCHHHHHhhCCCCCCCCccccCcccccccCHHHHHHHHHHcCCCCCCC
Confidence 4777889999999998889999999999999999999999987776799999999999999999988
No 2
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.84 E-value=1.3e-22 Score=120.56 Aligned_cols=67 Identities=48% Similarity=1.032 Sum_probs=62.4
Q ss_pred ccCcCCcccChhhhcCCCCCChhhHHhhhhccccccccccCcccccCCChHHHHHhhcccCCCCCCC
Q 035485 27 TCNPLELSPCASAITGANAPSAICCSKLKEQRICLCQYMKDPNLRKFVNSPNARKVATVCGSPFPRC 93 (93)
Q Consensus 27 ~C~~~~L~~C~~~v~~~~~Ps~~CC~~v~~~~~C~C~~ik~~~~~~~~~~~~a~~Lp~~Cgv~~p~C 93 (93)
+|+.++|.||++|++++++||++||++||++..|+|+|+|++.+..+||.++|.+||++||+++|+|
T Consensus 2 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P~C 68 (69)
T 1l6h_A 2 GCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC 68 (69)
T ss_dssp CSTTTTHHHHHHHHTTCCSTTHHHHHHHHHHHHHHHHHTTCSSHHHHTTTTTGGGCCCCCSSCSCCC
T ss_pred CCChhhcccCHHHHcCCCCCCHHHHHhhCCCCCCCCccccCcccccccCHHHHHHHHHHcCCCCCCC
Confidence 6887899999999998889999999999999999999999987776799999999999999999988
No 3
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.73 E-value=4.5e-19 Score=106.93 Aligned_cols=69 Identities=32% Similarity=0.671 Sum_probs=58.8
Q ss_pred ccccCc--CCcccChhhhcCC--CCCChhhHHhhhh-ccccccccccCcccccC-CChHHHHHhhcccCCCCC-CC
Q 035485 25 AMTCNP--LELSPCASAITGA--NAPSAICCSKLKE-QRICLCQYMKDPNLRKF-VNSPNARKVATVCGSPFP-RC 93 (93)
Q Consensus 25 ~~~C~~--~~L~~C~~~v~~~--~~Ps~~CC~~v~~-~~~C~C~~ik~~~~~~~-~~~~~a~~Lp~~Cgv~~p-~C 93 (93)
..+|++ .+|.||++|++++ .+||++||++||+ +..|+|.+++++.++.+ ||.++|.+||++||+++| +|
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~~p~~C 77 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC 77 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTCCHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCSCCCCC
T ss_pred cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhcCcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCCCCCCC
Confidence 568988 4789999999974 4899999999997 44999999987545543 899999999999999998 87
No 4
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.64 E-value=1.5e-17 Score=103.75 Aligned_cols=67 Identities=33% Similarity=0.685 Sum_probs=55.8
Q ss_pred ccccCc--CCcccChhhhcCCCCCChhhHHhhhhc---------cccccccccCcccc-cCCChHHHHHhhcccCCCCC
Q 035485 25 AMTCNP--LELSPCASAITGANAPSAICCSKLKEQ---------RICLCQYMKDPNLR-KFVNSPNARKVATVCGSPFP 91 (93)
Q Consensus 25 ~~~C~~--~~L~~C~~~v~~~~~Ps~~CC~~v~~~---------~~C~C~~ik~~~~~-~~~~~~~a~~Lp~~Cgv~~p 91 (93)
+++|++ ..|.||++||++++.|++.||+++++. ++|+|+++|+.... ..+|.++|..||++||+++|
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~p 79 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIP 79 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCCS
T ss_pred CCCHHHHHHHHHhHHHHHcCCCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCCC
Confidence 478988 479999999998878999999999971 37888889863222 35899999999999999987
No 5
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.61 E-value=3.5e-17 Score=101.71 Aligned_cols=65 Identities=28% Similarity=0.636 Sum_probs=54.7
Q ss_pred cccCc--CCcccChhhhcCCCCCChhhHHhhhh---------c--cccccccccCcccccCCChHHHHHhhcccCCCCC
Q 035485 26 MTCNP--LELSPCASAITGANAPSAICCSKLKE---------Q--RICLCQYMKDPNLRKFVNSPNARKVATVCGSPFP 91 (93)
Q Consensus 26 ~~C~~--~~L~~C~~~v~~~~~Ps~~CC~~v~~---------~--~~C~C~~ik~~~~~~~~~~~~a~~Lp~~Cgv~~p 91 (93)
++|++ ..|.||++|++++++|+++||++||+ + ..|+|.+...+.++ +||.++|.+||++||+++|
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~-~in~~~A~~LP~~Cgv~~p 79 (92)
T 2alg_A 2 ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP-GVNPNNAAALPGKCGVSIP 79 (92)
T ss_dssp CCHHHHHHHHGGGHHHHHHCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHST-TCCHHHHHHHHHHTTCCCS
T ss_pred CChHHHHHhccCcHHHHcCCCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccC-ccChHHHHHHHHHcCCCCC
Confidence 57887 37999999999877889999999998 3 38999655445565 7999999999999999976
No 6
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.56 E-value=2.3e-16 Score=97.69 Aligned_cols=63 Identities=33% Similarity=0.762 Sum_probs=51.5
Q ss_pred cccCc--CCcccChhhhcCCCCCChhhHHhhhh-----------ccccccccccCc--ccccCCChHHHHHhhcccCCCC
Q 035485 26 MTCNP--LELSPCASAITGANAPSAICCSKLKE-----------QRICLCQYMKDP--NLRKFVNSPNARKVATVCGSPF 90 (93)
Q Consensus 26 ~~C~~--~~L~~C~~~v~~~~~Ps~~CC~~v~~-----------~~~C~C~~ik~~--~~~~~~~~~~a~~Lp~~Cgv~~ 90 (93)
++|++ ..|.||++|++++++|+++||++||+ +..|+| +|+. .++ ++|.++|.+||++||+++
T Consensus 1 i~C~~v~~~L~pCl~y~~~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~~~~~~~-~in~~~A~~LP~~C~v~~ 77 (90)
T 1bwo_A 1 IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNC--LKGIARGIH-NLNEDNARSIPPKCGVNL 77 (90)
T ss_dssp CCHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHHHTTCT-TCCHHHHHTHHHHHTCCC
T ss_pred CCHHHHHHhhcccHHHHcCCCCCCHHHhHHHHHHHhhccCCCCCCccCcC--ccCchhccC-CcCHHHHHHHHHHcCCCC
Confidence 35766 47899999999877799999999998 238999 6653 333 689999999999999997
Q ss_pred C
Q 035485 91 P 91 (93)
Q Consensus 91 p 91 (93)
|
T Consensus 78 p 78 (90)
T 1bwo_A 78 P 78 (90)
T ss_dssp S
T ss_pred C
Confidence 6
No 7
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.54 E-value=6.6e-16 Score=95.74 Aligned_cols=63 Identities=29% Similarity=0.651 Sum_probs=51.3
Q ss_pred cccCc--CCcccChhhhcCCCCCChhhHHhhhhc-----------cccccccccCc--ccccCCChHHHHHhhcccCCCC
Q 035485 26 MTCNP--LELSPCASAITGANAPSAICCSKLKEQ-----------RICLCQYMKDP--NLRKFVNSPNARKVATVCGSPF 90 (93)
Q Consensus 26 ~~C~~--~~L~~C~~~v~~~~~Ps~~CC~~v~~~-----------~~C~C~~ik~~--~~~~~~~~~~a~~Lp~~Cgv~~ 90 (93)
++|++ ..|.||++|++++++|+++||++||+. ..|+| +|+. .++ .||.++|.+||++||+++
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC--~k~~~~~~~-~in~~~A~~LP~~Cgv~~ 77 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSC--LKAAAGAVR-GINPNNAEALPGKCGVNI 77 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCSCCCHHHHHHHHHHHTTTCSSHHHHHHHHH--HHHHTTCCS-SCCHHHHHHHHHHHTCCC
T ss_pred CCHHHHHHhccCcHHHHhCCCCCcHHHHHHHHHHHhhhccCCCCCcCCcc--cCCcccccC-CcCHHHHHHHHHHcCCCC
Confidence 46887 378999999998777999999999982 27888 5642 232 589999999999999987
Q ss_pred C
Q 035485 91 P 91 (93)
Q Consensus 91 p 91 (93)
|
T Consensus 78 p 78 (91)
T 1siy_A 78 P 78 (91)
T ss_dssp S
T ss_pred C
Confidence 6
No 8
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.52 E-value=9.3e-16 Score=95.41 Aligned_cols=66 Identities=30% Similarity=0.650 Sum_probs=52.1
Q ss_pred ccccCc--CCcccChhhhcCCC-CCChhhHHhhhhc-----------cccccccccCcccccCCChHHHHHhhcccCCCC
Q 035485 25 AMTCNP--LELSPCASAITGAN-APSAICCSKLKEQ-----------RICLCQYMKDPNLRKFVNSPNARKVATVCGSPF 90 (93)
Q Consensus 25 ~~~C~~--~~L~~C~~~v~~~~-~Ps~~CC~~v~~~-----------~~C~C~~ik~~~~~~~~~~~~a~~Lp~~Cgv~~ 90 (93)
+++|++ ..|.||++|+++++ .|+++||++||+. ..|+|.......++ .||.++|.+||++||+++
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~-~in~~~A~~LP~~C~v~~ 79 (93)
T 1afh_A 1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS-GLNAGNAASIPSKCGVSI 79 (93)
T ss_dssp CCSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTST-TCCHHHHHHHHHHHHCCC
T ss_pred CCChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEeecccccccc-CcCHHHHHHHHHHcCCCC
Confidence 367887 47999999999866 7888999999984 27888322223444 699999999999999987
Q ss_pred C
Q 035485 91 P 91 (93)
Q Consensus 91 p 91 (93)
|
T Consensus 80 p 80 (93)
T 1afh_A 80 P 80 (93)
T ss_dssp S
T ss_pred C
Confidence 6
No 9
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.49 E-value=1.8e-15 Score=93.80 Aligned_cols=63 Identities=29% Similarity=0.653 Sum_probs=51.0
Q ss_pred ccccCc--CCcccChhhhcCCCCCChhhHHhhhh-----------ccccccccccC--cccccCCChHHHHHhhcccCCC
Q 035485 25 AMTCNP--LELSPCASAITGANAPSAICCSKLKE-----------QRICLCQYMKD--PNLRKFVNSPNARKVATVCGSP 89 (93)
Q Consensus 25 ~~~C~~--~~L~~C~~~v~~~~~Ps~~CC~~v~~-----------~~~C~C~~ik~--~~~~~~~~~~~a~~Lp~~Cgv~ 89 (93)
+++|++ ..|.||++|++++++|+ +||++||+ +..|+| +|+ ..++ .+|.++|.+||++||++
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClC--lk~~~~~~~-~in~~~A~~LP~~C~v~ 76 (91)
T 1t12_A 1 AITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTC--LKSAAGAIS-GINLGKAAGLPSTCGVN 76 (91)
T ss_dssp CCCHHHHHHHTHHHHHHHTTSSCCT-THHHHHHHHHHTTCSTHHHHHHHHH--HHHHHHHCT-TCCHHHHHHHHHHTTCC
T ss_pred CCChHHHHHhccCcHHHHcCCCChH-HHHHHHHHHHhhccCCCCCCccCCC--ccccccccC-CcChhHHHHHHHHcCCC
Confidence 367877 47999999999765677 99999998 238999 564 2344 69999999999999999
Q ss_pred CC
Q 035485 90 FP 91 (93)
Q Consensus 90 ~p 91 (93)
+|
T Consensus 77 ~p 78 (91)
T 1t12_A 77 IP 78 (91)
T ss_dssp CS
T ss_pred CC
Confidence 76
No 10
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=92.54 E-value=0.059 Score=32.18 Aligned_cols=62 Identities=24% Similarity=0.618 Sum_probs=43.6
Q ss_pred ccccCcCCcccChhhhcCCCCCChhhHHhhhh-----ccccccccccCcccccCCChHHHHH-hhcccCCCCC
Q 035485 25 AMTCNPLELSPCASAITGANAPSAICCSKLKE-----QRICLCQYMKDPNLRKFVNSPNARK-VATVCGSPFP 91 (93)
Q Consensus 25 ~~~C~~~~L~~C~~~v~~~~~Ps~~CC~~v~~-----~~~C~C~~ik~~~~~~~~~~~~a~~-Lp~~Cgv~~p 91 (93)
..+|. +|.-|..-+.+...|...||.-+++ ...|+|-.+| .++. +|.+-+.+ |-..||...|
T Consensus 5 ~~~CP--kLgvCanvL~g~~~~~~~CC~Ll~GL~dleAAvCLCtaik--~Lgi-lnlpv~L~llln~Cgk~~P 72 (80)
T 1hyp_A 5 RPSCP--DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLR--ALGI-LNLNRNLQLILNSCGRSYP 72 (80)
T ss_dssp -CCSC--CCGGGGGGGGTCCTTHHHHHHHHHTSCHHHHHHHHHHHHH--HHTC-SCHHHHHHHHHHHTTCSSC
T ss_pred CCCCC--chhHHHHHhCcCCCCCCccchhhhCcchhhhhhhhhhhcc--ccce-eecChhHHHHHHHhCCcCc
Confidence 34576 6888988774322466789999998 2399998887 3444 57766555 5678999987
No 11
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=92.07 E-value=0.099 Score=32.37 Aligned_cols=61 Identities=18% Similarity=0.358 Sum_probs=42.2
Q ss_pred cccChhhhcCC---C----------CCChhhHHhhhhcc-ccccccccCcc---cccC---CChHHHHHhhcccCCCCCC
Q 035485 33 LSPCASAITGA---N----------APSAICCSKLKEQR-ICLCQYMKDPN---LRKF---VNSPNARKVATVCGSPFPR 92 (93)
Q Consensus 33 L~~C~~~v~~~---~----------~Ps~~CC~~v~~~~-~C~C~~ik~~~---~~~~---~~~~~a~~Lp~~Cgv~~p~ 92 (93)
|.+|..||... . ..-..||+-++..+ .|.|..|+... +..- -....|..||+.||++...
T Consensus 21 L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~~~~CrC~al~~~~Q~q~~g~q~~~~~q~A~~LP~~C~i~p~~ 100 (103)
T 1s6d_A 21 LNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQP 100 (103)
T ss_dssp TTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHSCGGGSSHHHHHHTTSTTCSSTHHHHHHHHHHHHHHTTSSSSC
T ss_pred HHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhcCcccCcHHHHHHHHHHhcchhHHHHHHHHHhcHHhcCCCccc
Confidence 89999999731 1 12468999999976 99999986421 1110 1223489999999997544
Q ss_pred C
Q 035485 93 C 93 (93)
Q Consensus 93 C 93 (93)
|
T Consensus 101 C 101 (103)
T 1s6d_A 101 C 101 (103)
T ss_dssp S
T ss_pred C
Confidence 5
No 12
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=89.55 E-value=0.043 Score=34.62 Aligned_cols=62 Identities=23% Similarity=0.417 Sum_probs=41.0
Q ss_pred CcccChhhhcC----CC---CCC-------hhhHHhhhhcc-ccccccccCc---cccc---C------CChHHHHHhhc
Q 035485 32 ELSPCASAITG----AN---APS-------AICCSKLKEQR-ICLCQYMKDP---NLRK---F------VNSPNARKVAT 84 (93)
Q Consensus 32 ~L~~C~~~v~~----~~---~Ps-------~~CC~~v~~~~-~C~C~~ik~~---~~~~---~------~~~~~a~~Lp~ 84 (93)
.|..|..||.. +. .+. ..||+-|+..+ .|.|..|+.. .... + =....|..||+
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~q~A~~LP~ 96 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPS 96 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCcCccCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhChH
Confidence 57889999961 11 111 35999999977 9999988641 1110 0 02345999999
Q ss_pred ccCCCCCCC
Q 035485 85 VCGSPFPRC 93 (93)
Q Consensus 85 ~Cgv~~p~C 93 (93)
.||+....|
T Consensus 97 ~C~i~p~~C 105 (114)
T 2lvf_A 97 RCNLSPMRC 105 (114)
T ss_dssp HHCCCCSCC
T ss_pred hcCCCcccC
Confidence 999984345
No 13
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=88.67 E-value=0.076 Score=30.91 Aligned_cols=46 Identities=22% Similarity=0.567 Sum_probs=32.5
Q ss_pred hhhHHhhhhcc-ccccccccCcc---------ccc---CCChHHHHHhhcccCCCCC-CC
Q 035485 48 AICCSKLKEQR-ICLCQYMKDPN---------LRK---FVNSPNARKVATVCGSPFP-RC 93 (93)
Q Consensus 48 ~~CC~~v~~~~-~C~C~~ik~~~---------~~~---~~~~~~a~~Lp~~Cgv~~p-~C 93 (93)
..||+-++..+ .|.|..|+... +.. .-....|..||+.||+..| .|
T Consensus 8 qqCC~eL~~~~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~~~C 67 (72)
T 2ds2_B 8 RQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGAC 67 (72)
T ss_dssp HHHHHHHTTSCGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTCCCC
T ss_pred HHHHHHHHhcCccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCCCcC
Confidence 47999999976 99999987421 110 0123458999999999843 45
No 14
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=85.96 E-value=0.06 Score=31.50 Aligned_cols=49 Identities=22% Similarity=0.521 Sum_probs=33.6
Q ss_pred CCChhhHHhhhhcc-ccccccccCcc--------cccC---CChHHHHHhhcccCCCCC-CC
Q 035485 45 APSAICCSKLKEQR-ICLCQYMKDPN--------LRKF---VNSPNARKVATVCGSPFP-RC 93 (93)
Q Consensus 45 ~Ps~~CC~~v~~~~-~C~C~~ik~~~--------~~~~---~~~~~a~~Lp~~Cgv~~p-~C 93 (93)
..-..||+-++..+ .|.|..|+... +..- -....|..||+.||+..+ .|
T Consensus 9 ~~~qqCC~qL~~~~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~~~C 70 (75)
T 1pnb_B 9 WLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTC 70 (75)
T ss_dssp SCTHHHHHHHHTSCGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTTCCC
T ss_pred HHHHHHHHHHHhCCcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCCCCC
Confidence 34468999999976 99999887421 1110 123347889999999854 55
No 15
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=85.43 E-value=0.11 Score=39.09 Aligned_cols=46 Identities=26% Similarity=0.633 Sum_probs=32.6
Q ss_pred hhhHHhhhhcc---ccccccccCc---ccc------cC-CChHHHHHhhcccCCCCC-CC
Q 035485 48 AICCSKLKEQR---ICLCQYMKDP---NLR------KF-VNSPNARKVATVCGSPFP-RC 93 (93)
Q Consensus 48 ~~CC~~v~~~~---~C~C~~ik~~---~~~------~~-~~~~~a~~Lp~~Cgv~~p-~C 93 (93)
..||+.|+..+ .|.|+-|+.. ... .. .-...|..||..||+..| +|
T Consensus 429 ~~cc~~l~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~~~c 488 (500)
T 3ob4_A 429 ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRC 488 (500)
T ss_dssp HHHHHHHGGGTTCHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCCSCC
T ss_pred HHHHHHHHhCCcccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCCccC
Confidence 68999999863 9999888751 110 00 112349999999999977 57
No 16
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=84.37 E-value=0.13 Score=31.96 Aligned_cols=62 Identities=23% Similarity=0.521 Sum_probs=41.0
Q ss_pred CcccChhhhcC---C-C---CC---------ChhhHHhhhhcc-ccccccccCcc--------cccC---CChHHHHHhh
Q 035485 32 ELSPCASAITG---A-N---AP---------SAICCSKLKEQR-ICLCQYMKDPN--------LRKF---VNSPNARKVA 83 (93)
Q Consensus 32 ~L~~C~~~v~~---~-~---~P---------s~~CC~~v~~~~-~C~C~~ik~~~--------~~~~---~~~~~a~~Lp 83 (93)
.|.+|..|+.. + + .| -..||+.++..+ .|.|..|+... +..- -....|..||
T Consensus 14 ~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~~LP 93 (109)
T 1sm7_A 14 HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLP 93 (109)
T ss_dssp CCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTTCHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTSSHH
T ss_pred cHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhcCccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHhCH
Confidence 48899999972 1 1 11 247999999977 99999886421 1100 0122378899
Q ss_pred cccCCCCC-CC
Q 035485 84 TVCGSPFP-RC 93 (93)
Q Consensus 84 ~~Cgv~~p-~C 93 (93)
+.||+..+ .|
T Consensus 94 ~~Cnl~~~~~C 104 (109)
T 1sm7_A 94 NVCNMKQIGTC 104 (109)
T ss_dssp HHSCCCSSCSS
T ss_pred HhcCCCCCCCC
Confidence 99999854 45
No 17
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=83.09 E-value=0.48 Score=30.36 Aligned_cols=60 Identities=22% Similarity=0.497 Sum_probs=40.7
Q ss_pred CcccChhhhcCC---C---C-C-----------ChhhHHhhhhc--c-ccccccccCcc------ccc-CCC---hHHHH
Q 035485 32 ELSPCASAITGA---N---A-P-----------SAICCSKLKEQ--R-ICLCQYMKDPN------LRK-FVN---SPNAR 80 (93)
Q Consensus 32 ~L~~C~~~v~~~---~---~-P-----------s~~CC~~v~~~--~-~C~C~~ik~~~------~~~-~~~---~~~a~ 80 (93)
.|.+|..||.-. . + + -..||+-|+.. + .|.|..|+... +.. -.. ...|.
T Consensus 24 qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~~~~qCrCeaL~q~~Q~qq~q~~gqq~~~~~~q~A~ 103 (127)
T 1w2q_A 24 NLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELM 103 (127)
T ss_dssp CCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHSCTTTTTSTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 589999999731 1 1 1 25799999987 6 99999987422 111 011 24499
Q ss_pred HhhcccCCCCC
Q 035485 81 KVATVCGSPFP 91 (93)
Q Consensus 81 ~Lp~~Cgv~~p 91 (93)
.||..||++-|
T Consensus 104 ~LP~~C~i~~~ 114 (127)
T 1w2q_A 104 SLPQQCNFRAP 114 (127)
T ss_dssp HHHHHHTCCCS
T ss_pred HhHHhcCCCCC
Confidence 99999999433
No 18
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=81.36 E-value=0.27 Score=31.39 Aligned_cols=57 Identities=26% Similarity=0.591 Sum_probs=39.4
Q ss_pred CcccChhhhcCC---C--------CC-------C----hhhHHhhhhcc-ccccccccCcc--------ccc-CC--ChH
Q 035485 32 ELSPCASAITGA---N--------AP-------S----AICCSKLKEQR-ICLCQYMKDPN--------LRK-FV--NSP 77 (93)
Q Consensus 32 ~L~~C~~~v~~~---~--------~P-------s----~~CC~~v~~~~-~C~C~~ik~~~--------~~~-~~--~~~ 77 (93)
.|.+|..||... . .| . ..||+-|+..+ .|.|..|+... +.. -. ...
T Consensus 26 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~~~C~C~aL~~~v~~~~qQgq~~gqq~~~~~q 105 (125)
T 1psy_A 26 DLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQ 105 (125)
T ss_dssp TTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHTTCCTTCSHHHHH
T ss_pred hHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 689999999731 0 13 1 57999999976 99999986421 111 01 234
Q ss_pred HHHHhhcccCC
Q 035485 78 NARKVATVCGS 88 (93)
Q Consensus 78 ~a~~Lp~~Cgv 88 (93)
.|..||..||+
T Consensus 106 ~A~~LP~~C~i 116 (125)
T 1psy_A 106 RAGEIVSSCGV 116 (125)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHhhHHHcCC
Confidence 48999999998
No 19
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=62.54 E-value=1.4 Score=28.07 Aligned_cols=61 Identities=18% Similarity=0.379 Sum_probs=40.6
Q ss_pred CcccChhhhcC-----CC-CCC----hhhHHhhhhcc-ccccccccC---cccc-------cC-CCh---------HHHH
Q 035485 32 ELSPCASAITG-----AN-APS----AICCSKLKEQR-ICLCQYMKD---PNLR-------KF-VNS---------PNAR 80 (93)
Q Consensus 32 ~L~~C~~~v~~-----~~-~Ps----~~CC~~v~~~~-~C~C~~ik~---~~~~-------~~-~~~---------~~a~ 80 (93)
.|..|..||.. +. .|. ..||.-++..+ .|.|.-|.. ..+. .. -.. ..|.
T Consensus 16 ~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~~A~ 95 (122)
T 1b1u_A 16 PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAP 95 (122)
T ss_dssp TTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHHHGG
T ss_pred cchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhCCccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHHHHH
Confidence 58899999952 22 342 46999999987 999987653 1111 00 011 2478
Q ss_pred Hh--hcccCCCCCC
Q 035485 81 KV--ATVCGSPFPR 92 (93)
Q Consensus 81 ~L--p~~Cgv~~p~ 92 (93)
.| |+.||++.++
T Consensus 96 ~Lv~P~~Cnl~~~~ 109 (122)
T 1b1u_A 96 KLVTEVECNLATIH 109 (122)
T ss_dssp GTTSTTTTCCCCTT
T ss_pred hcCCcccCCCCCCC
Confidence 89 9999998763
No 20
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=59.17 E-value=3.1 Score=26.61 Aligned_cols=60 Identities=18% Similarity=0.329 Sum_probs=40.1
Q ss_pred CcccChhhhcC-----CC-CCC----hhhHHhhhhcc-ccccccccC---cccc-------cCC--C---------hHHH
Q 035485 32 ELSPCASAITG-----AN-APS----AICCSKLKEQR-ICLCQYMKD---PNLR-------KFV--N---------SPNA 79 (93)
Q Consensus 32 ~L~~C~~~v~~-----~~-~Ps----~~CC~~v~~~~-~C~C~~ik~---~~~~-------~~~--~---------~~~a 79 (93)
.|..|..||.. +. .|. ..||.-+...+ .|.|.-|.. ..+. ... . ...|
T Consensus 16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~~~A 95 (127)
T 1bea_A 16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFA 95 (127)
T ss_dssp CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTSCGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHHHHH
T ss_pred cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhcCcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHHHHH
Confidence 47889999952 22 342 35999999977 999987753 1110 000 1 2248
Q ss_pred HHh--hcccCCCCC
Q 035485 80 RKV--ATVCGSPFP 91 (93)
Q Consensus 80 ~~L--p~~Cgv~~p 91 (93)
..| |+.||+..+
T Consensus 96 ~~Lv~P~~Cnl~~~ 109 (127)
T 1bea_A 96 ATLVTEAECNLATI 109 (127)
T ss_dssp TTTTSTTTTCCCCT
T ss_pred HhcCCcccCCCCCC
Confidence 889 999999876
No 21
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=20.62 E-value=18 Score=22.89 Aligned_cols=60 Identities=20% Similarity=0.424 Sum_probs=39.8
Q ss_pred CcccChhhhcC---CC-CC---ChhhHHhhhhcc-ccccccccCc---cccc-----------CC------Ch-HHHHHh
Q 035485 32 ELSPCASAITG---AN-AP---SAICCSKLKEQR-ICLCQYMKDP---NLRK-----------FV------NS-PNARKV 82 (93)
Q Consensus 32 ~L~~C~~~v~~---~~-~P---s~~CC~~v~~~~-~C~C~~ik~~---~~~~-----------~~------~~-~~a~~L 82 (93)
.|..|..||.. +. .| -..||..++..+ .|.|.-|... .+.. -+ .. ..|..|
T Consensus 16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A~~L 95 (124)
T 1hss_A 16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTAASI 95 (124)
T ss_dssp CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHHTTH
T ss_pred cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhcCcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHHHhc
Confidence 57889999962 22 23 246999999977 9999877531 1110 01 11 148889
Q ss_pred hcccCCCCC
Q 035485 83 ATVCGSPFP 91 (93)
Q Consensus 83 p~~Cgv~~p 91 (93)
|+.||+..+
T Consensus 96 P~~Cnl~~~ 104 (124)
T 1hss_A 96 TAVCRLPIV 104 (124)
T ss_dssp HHHTTCCEE
T ss_pred hhhcCCCCC
Confidence 999999765
Done!