BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035486
(234 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SA18|AKH1_ARATH Bifunctional aspartokinase/homoserine dehydrogenase 1,
chloroplastic OS=Arabidopsis thaliana GN=AKHSDH1 PE=1
SV=1
Length = 911
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/234 (88%), Positives = 225/234 (96%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
YLK+R LQRKSYTHYFYEATVGAGLPIISTLRGLLETGD ILRIEGIFSGTLSYLFN+FV
Sbjct: 678 YLKIRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYLFNNFV 737
Query: 61 GTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEP 120
GTRSFSEVVAEAK+AG+TEPDPRDDLSGTDVARKV ILARESGLKL+L LPV++LVP+P
Sbjct: 738 GTRSFSEVVAEAKQAGFTEPDPRDDLSGTDVARKVTILARESGLKLDLEGLPVQNLVPKP 797
Query: 121 LKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHP 180
L+ACASAEEFM++LPQFDEEL+KQR+EAE AGEVLRYVGVVDA+ K+G VEL+RYKKDHP
Sbjct: 798 LQACASAEEFMEKLPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHP 857
Query: 181 FAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 234
FAQLSG+DNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLA YLGAPS
Sbjct: 858 FAQLSGADNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLAFYLGAPS 911
>sp|O81852|AKH2_ARATH Bifunctional aspartokinase/homoserine dehydrogenase 2,
chloroplastic OS=Arabidopsis thaliana GN=AKHSDH2 PE=1
SV=1
Length = 916
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/234 (85%), Positives = 220/234 (94%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
YLKLR LQRKSYTHYFYEATVGAGLPIISTLRGLLETGD ILRIEGI SGTLSYLFN+FV
Sbjct: 683 YLKLRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGICSGTLSYLFNNFV 742
Query: 61 GTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEP 120
G RSFSEVV EAK AG+TEPDPRDDLSGTDVARKVIILARESGLKL+L+DLP+RSLVPEP
Sbjct: 743 GDRSFSEVVTEAKNAGFTEPDPRDDLSGTDVARKVIILARESGLKLDLADLPIRSLVPEP 802
Query: 121 LKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHP 180
LK C S EEFM++LPQ+D +LAK+R +AE++GEVLRYVGVVDA+N++G VELRRYKK+HP
Sbjct: 803 LKGCTSVEEFMEKLPQYDGDLAKERLDAENSGEVLRYVGVVDAVNQKGTVELRRYKKEHP 862
Query: 181 FAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 234
FAQL+GSDNIIAFTT RYK+ PLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS
Sbjct: 863 FAQLAGSDNIIAFTTTRYKDHPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 916
>sp|P49080|AKH2_MAIZE Bifunctional aspartokinase/homoserine dehydrogenase 2,
chloroplastic OS=Zea mays GN=AKHSDH2 PE=2 SV=1
Length = 917
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 193/234 (82%), Positives = 221/234 (94%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
YLKLR++QR SYTHYFYEATVGAGLPIISTLRGLLETGD ILRIEGIFSGTLSY+FN+F
Sbjct: 684 YLKLRTMQRASYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFE 743
Query: 61 GTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEP 120
GTR+FS+VVAEA+EAGYTEPDPRDDLSGTDVARKV++LARESGL+LELSD+PV+SLVPE
Sbjct: 744 GTRAFSDVVAEAREAGYTEPDPRDDLSGTDVARKVVVLARESGLRLELSDIPVKSLVPET 803
Query: 121 LKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHP 180
L +C+SA+EFM++LP FDE+ A+QR +AE AGEVLRYVG +DA+N+ G+VELRRY++DHP
Sbjct: 804 LASCSSADEFMQKLPSFDEDWARQRSDAEAAGEVLRYVGALDAVNRSGQVELRRYRRDHP 863
Query: 181 FAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 234
FAQLSGSDNIIAFTT RYKEQPLIVRGPGAGA+VTAGG+F DILRLASYLGAPS
Sbjct: 864 FAQLSGSDNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASYLGAPS 917
>sp|P49079|AKH1_MAIZE Bifunctional aspartokinase/homoserine dehydrogenase 1,
chloroplastic OS=Zea mays GN=AKHSDH1 PE=2 SV=1
Length = 920
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/234 (82%), Positives = 219/234 (93%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
YLKLR+LQR SYTHYFYEATVGAGLPIISTLRGLLETGD ILRIEGIFSGTLSY+FN+F
Sbjct: 687 YLKLRTLQRASYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFE 746
Query: 61 GTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEP 120
G R+FS+VVAEAK+AGYTEPDPRDDLSGTDVARKVIILARESGL LELSD+PVRSLVPE
Sbjct: 747 GARTFSDVVAEAKKAGYTEPDPRDDLSGTDVARKVIILARESGLGLELSDIPVRSLVPEA 806
Query: 121 LKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHP 180
LK+C SA+E+M++LP FDE+ A++R+ AE AGEVLRYVGVVD ++K+G+VELR YK+DHP
Sbjct: 807 LKSCTSADEYMQKLPSFDEDWARERKNAEAAGEVLRYVGVVDVVSKKGQVELRAYKRDHP 866
Query: 181 FAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 234
FAQLSGSDNIIAFTT RYK+QPLIVRGPGAGA+VTAGG+F DILRL+SYLGAPS
Sbjct: 867 FAQLSGSDNIIAFTTSRYKDQPLIVRGPGAGAEVTAGGVFCDILRLSSYLGAPS 920
>sp|P37142|AKH_DAUCA Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic
(Fragment) OS=Daucus carota PE=1 SV=1
Length = 921
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/234 (80%), Positives = 217/234 (92%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
YLKLR+LQR+SYTHYFYEATV AGLPII+TL+GLLETGD ILRIEGIFSGTLSY+FN+F
Sbjct: 688 YLKLRALQRRSYTHYFYEATVVAGLPIITTLQGLLETGDKILRIEGIFSGTLSYIFNNFK 747
Query: 61 GTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEP 120
T FSEVV+EAK AGYTEPDPRDDL+GTDVARKVIILAR SGLKLELSD+PV+SLVPEP
Sbjct: 748 STTPFSEVVSEAKAAGYTEPDPRDDLAGTDVARKVIILARGSGLKLELSDIPVQSLVPEP 807
Query: 121 LKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHP 180
L+ ASAEEF+ QLPQFD ++ ++R++AE+AGEVLRYVGVVDA+N++G VEL+RYKK+HP
Sbjct: 808 LRGIASAEEFLLQLPQFDSDMTRKREDAENAGEVLRYVGVVDAVNQKGVVELKRYKKEHP 867
Query: 181 FAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 234
FAQLSGSDNI AFTT+RY +QP I+RGPGAGA+VTAGG+FSDILRLASYLGAPS
Sbjct: 868 FAQLSGSDNINAFTTERYNKQPPIIRGPGAGAEVTAGGVFSDILRLASYLGAPS 921
>sp|O94671|DHOM_SCHPO Probable homoserine dehydrogenase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC776.03 PE=1 SV=1
Length = 376
Score = 238 bits (606), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 149/209 (71%), Gaps = 6/209 (2%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
Y + ++S +EA+VGAGLPIISTL+ L+ TGD I++IEGIFSGTLSY+FN +
Sbjct: 133 YQNIIKASKESGALLMHEASVGAGLPIISTLKELIATGDEIIKIEGIFSGTLSYIFNVWS 192
Query: 61 -----GTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLE-LSDLPVR 114
GT SFS++V AK+ GYTEPDPRDDL+G DVARKV IL+R +G+ +E S PV+
Sbjct: 193 PNGKKGTASFSDIVKIAKQNGYTEPDPRDDLNGMDVARKVTILSRIAGVHVESASSFPVK 252
Query: 115 SLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRR 174
SL+PEPLK+ +AEEF+ LP FD E A R+EAE G+V+R+VG D NK V+L +
Sbjct: 253 SLIPEPLKSAVNAEEFLAGLPNFDSEFASMREEAEKEGKVVRFVGEADVANKTTLVKLEK 312
Query: 175 YKKDHPFAQLSGSDNIIAFTTKRYKEQPL 203
Y HPFA L SDNII+FTTKRY +PL
Sbjct: 313 YDASHPFANLQSSDNIISFTTKRYHTRPL 341
>sp|Q5B998|DHOM_EMENI Homoserine dehydrogenase OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN2882
PE=1 SV=1
Length = 368
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 163/221 (73%), Gaps = 10/221 (4%)
Query: 16 FYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV---GTRS--FSEVVA 70
++E+TVGAGLP+ISTL+ L+ TGD + RIEG+FSGTLS+LFN+F G+ S +SEVV+
Sbjct: 144 YHESTVGAGLPVISTLKDLVNTGDEVTRIEGVFSGTLSFLFNTFAPASGSSSAKWSEVVS 203
Query: 71 EAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSD-LPVRSLVPEPLKACASAE- 128
+AKE GYTEPDPRDDL+G DVARK+ ILAR +GL ++ D P+ SL+P L + S+
Sbjct: 204 QAKELGYTEPDPRDDLNGMDVARKLTILARIAGLDVQSPDSFPIESLIPAELTSLPSSAD 263
Query: 129 ---EFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLS 185
+FM +LP+FD ++A ++ AE AG+V+RYVG VD KE RV L+++ KD A L
Sbjct: 264 GIAQFMARLPEFDSQMAAIKEGAEKAGKVVRYVGSVDVAKKEVRVGLQQFDKDSAIAGLK 323
Query: 186 GSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRL 226
GSDNII+F T+RY PLIV+G GAG VTA G+ +D+L++
Sbjct: 324 GSDNIISFYTRRYGSNPLIVQGAGAGGDVTAMGVTADLLKV 364
>sp|P00562|AK2H_ECOLI Bifunctional aspartokinase/homoserine dehydrogenase 2
OS=Escherichia coli (strain K12) GN=metL PE=1 SV=3
Length = 810
Score = 210 bits (535), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 150/230 (65%), Gaps = 2/230 (0%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
Y ++ K+ H+ Y ATVGAGLPI T+R L+++GD IL I GIFSGTLS+LF F
Sbjct: 583 YRQIHDAFEKTGRHWLYNATVGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLFLQFD 642
Query: 61 GTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEP 120
G+ F+E+V +A + G TEPDPRDDLSG DV RK++ILARE+G +E + V SLVP
Sbjct: 643 GSVPFTELVDQAWQQGLTEPDPRDDLSGKDVMRKLVILAREAGYNIEPDQVRVESLVPAH 702
Query: 121 LKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHP 180
+ S + F + + +E++ ++ + A + G VLRYV DA N + RV + ++DHP
Sbjct: 703 CEG-GSIDHFFENGDELNEQMVQRLEAAREMGLVLRYVARFDA-NGKARVGVEAVREDHP 760
Query: 181 FAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYL 230
A L DN+ A ++ Y++ PL++RGPGAG VTAG I SDI RLA L
Sbjct: 761 LASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAIQSDINRLAQLL 810
>sp|P31116|DHOM_YEAST Homoserine dehydrogenase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HOM6 PE=1 SV=1
Length = 359
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 162/220 (73%), Gaps = 6/220 (2%)
Query: 16 FYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGTRS----FSEVVAE 71
++EATVGAGLPIIS LR +++TGD + +IEGIFSGTLSY+FN F +++ FS+VV
Sbjct: 141 YHEATVGAGLPIISFLREIIQTGDEVEKIEGIFSGTLSYIFNEFSTSQANDVKFSDVVKV 200
Query: 72 AKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLEL-SDLPVRSLVPEPLKACASAEEF 130
AK+ GYTEPDPRDDL+G DVARKV I+ R SG+++E + PV+SL+P+PL++ SA+EF
Sbjct: 201 AKKLGYTEPDPRDDLNGLDVARKVTIVGRISGVEVESPTSFPVQSLIPKPLESVKSADEF 260
Query: 131 MKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNI 190
+++L +D++L + ++EA +VLR++G VD K V + +Y HPFA L GSDN+
Sbjct: 261 LEKLSDYDKDLTQLKKEAATENKVLRFIGKVDVATKSVSVGIEKYDYSHPFASLKGSDNV 320
Query: 191 IAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYL 230
I+ TKRY P++++G GAGA VTA G+ D++++A L
Sbjct: 321 ISIKTKRY-TNPVVIQGAGAGAAVTAAGVLGDVIKIAQRL 359
>sp|P27725|AK1H_SERMA Bifunctional aspartokinase/homoserine dehydrogenase 1 OS=Serratia
marcescens GN=thrA PE=3 SV=1
Length = 819
Score = 205 bits (521), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 147/231 (63%), Gaps = 6/231 (2%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
Y +LR+ S+ + Y+ VGAGLP+I L+ LL GD ++R GI SG+LS++F
Sbjct: 589 YQQLRAAAAGSHRKFLYDTNVGAGLPVIENLQNLLNAGDELVRFSGILSGSLSFIFGKLD 648
Query: 61 GTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEP 120
S S +A+ GYTEPDPRDDLSG DVARK++ILARE+G KLELSD+ V ++P
Sbjct: 649 EGLSLSAATLQARANGYTEPDPRDDLSGMDVARKLLILAREAGYKLELSDIEVEPVLPPS 708
Query: 121 LKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKD-- 178
A + F+ +LP+ D+E A+ A + G+VLRYVG++D EGR ++R D
Sbjct: 709 FDASGDVDTFLARLPELDKEFARNVANAAEQGKVLRYVGLID----EGRCKVRIEAVDGN 764
Query: 179 HPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASY 229
P ++ +N +AF ++ Y+ PL++RG GAG VTA G+F+D+LR S+
Sbjct: 765 DPLYKVKNGENALAFYSRYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSW 815
>sp|P44505|AKH_HAEIN Bifunctional aspartokinase/homoserine dehydrogenase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=thrA PE=3 SV=1
Length = 815
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/227 (47%), Positives = 146/227 (64%), Gaps = 6/227 (2%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
Y +LR + S + YE VGAGLP+I L+ LL GD + EGI SG+LS++F
Sbjct: 589 YNELRQNAQASQHKFLYETNVGAGLPVIENLQNLLAAGDELEYFEGILSGSLSFIFGKLE 648
Query: 61 GTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEP 120
S SEV A A+E G+TEPDPRDDLSG DVARK++ILARE+G++LELSD+ V ++P+
Sbjct: 649 EGLSLSEVTALAREKGFTEPDPRDDLSGQDVARKLLILAREAGIELELSDVEVEGVLPKG 708
Query: 121 LKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKD-- 178
SA+EFM LPQ DEE + A+ G+VLRYVG + EG+ ++ D
Sbjct: 709 FSDGKSADEFMAMLPQLDEEFKTRVATAKAEGKVLRYVGKI----SEGKCKVSIVAVDLN 764
Query: 179 HPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILR 225
+P ++ +N +AF T+ Y+ PL++RG GAG VTA GIF+DILR
Sbjct: 765 NPLYKVKDGENALAFYTRYYQPIPLLLRGYGAGNAVTAAGIFADILR 811
>sp|P00561|AK1H_ECOLI Bifunctional aspartokinase/homoserine dehydrogenase 1
OS=Escherichia coli (strain K12) GN=thrA PE=1 SV=2
Length = 820
Score = 201 bits (510), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 142/229 (62%), Gaps = 1/229 (0%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
Y +LR KS + Y+ VGAGLP+I L+ LL GD +++ GI SG+LSY+F
Sbjct: 589 YHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLNAGDELMKFSGILSGSLSYIFGKLD 648
Query: 61 GTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEP 120
SFSE A+E GYTEPDPRDDLSG DVARK++ILARE+G +LEL+D+ + ++P
Sbjct: 649 EGMSFSEATTLAREMGYTEPDPRDDLSGMDVARKLLILARETGRELELADIEIEPVLPAE 708
Query: 121 LKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHP 180
A FM L Q D+ A + +A D G+VLRYVG +D + RV++ + P
Sbjct: 709 FNAEGDVAAFMANLSQLDDLFAARVAKARDEGKVLRYVGNIDE-DGVCRVKIAEVDGNDP 767
Query: 181 FAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASY 229
++ +N +AF + Y+ PL++RG GAG VTA G+F+D+LR S+
Sbjct: 768 LFKVKNGENALAFYSHYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSW 816
>sp|Q89AR4|AKH_BUCBP Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera
aphidicola subsp. Baizongia pistaciae (strain Bp)
GN=thrA PE=3 SV=1
Length = 816
Score = 197 bits (500), Expect = 7e-50, Method: Composition-based stats.
Identities = 95/228 (41%), Positives = 145/228 (63%), Gaps = 5/228 (2%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
Y +R +K +FYE VGAGLP+I L+ LL TGD ++ +GI SG+LS++F
Sbjct: 590 YEDIRLAAQKEKKKFFYETNVGAGLPVIENLKNLLRTGDTLIHFKGILSGSLSFIFGKLE 649
Query: 61 GTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEP 120
S SE +A+ G+TEP+P+DDLSG DVARK++ILARE G KLEL D+ + L+P+
Sbjct: 650 DNISLSEATKQAQSLGFTEPNPKDDLSGIDVARKLLILAREVGYKLELKDIKIEPLLPKE 709
Query: 121 LKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDH- 179
++ +F+ +L + D+ + ++A G+ LR+VG+ IN++G +++ + DH
Sbjct: 710 FNNISNTTDFITKLKELDQIFCNRVKKARKLGKRLRFVGI---INQKGNCQVKIDEVDHN 766
Query: 180 -PFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRL 226
P + +N +AF +K Y+ PL++RG GAG VTA GIFSD+LR+
Sbjct: 767 DPLYNIKNGENALAFYSKYYQPIPLVLRGYGAGNNVTASGIFSDVLRI 814
>sp|Q8K9U9|AKH_BUCAP Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera
aphidicola subsp. Schizaphis graminum (strain Sg)
GN=thrA PE=3 SV=1
Length = 814
Score = 192 bits (488), Expect = 2e-48, Method: Composition-based stats.
Identities = 91/226 (40%), Positives = 143/226 (63%), Gaps = 1/226 (0%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
Y ++R+ K + YE VGAGLP+I+TL+ L TGD ++ +GI SG+LS++F
Sbjct: 588 YSEIRTTALKENKKFLYETNVGAGLPVINTLQSLFSTGDCLISFKGILSGSLSFIFGKLE 647
Query: 61 GTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEP 120
SE EAK+ G+TEP+P DDLSG DVARK+++LARE G +EL D+ + ++PE
Sbjct: 648 EGVLLSEATKEAKKLGFTEPNPFDDLSGIDVARKLLVLAREIGYSIELKDISIEPILPER 707
Query: 121 LKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHP 180
K ++EEF+ +L + D +++ +A D G VLR++G ++ N + V++ ++P
Sbjct: 708 FKKYQNSEEFLFKLKELDSFFSERVNKARDIGNVLRFIGSIEK-NGKCSVKIEEINSNNP 766
Query: 181 FAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRL 226
++ +N + F T Y+ PL++RG GAG VTA G+FSD+LR+
Sbjct: 767 LYKVKNGENALTFYTNYYQPIPLVLRGYGAGNDVTASGVFSDLLRI 812
>sp|P57290|AKH_BUCAI Bifunctional aspartokinase/homoserine dehydrogenase OS=Buchnera
aphidicola subsp. Acyrthosiphon pisum (strain APS)
GN=thrA PE=3 SV=1
Length = 816
Score = 184 bits (466), Expect = 6e-46, Method: Composition-based stats.
Identities = 90/228 (39%), Positives = 142/228 (62%), Gaps = 1/228 (0%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
Y K+R ++ + YE VGAGLP+I TL+ L ++GD+++ +GI SG+LS++F
Sbjct: 590 YKKIRKSVAQTGKKFLYETNVGAGLPVIETLQNLFKSGDNLICFKGILSGSLSFIFGRLE 649
Query: 61 GTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEP 120
S+ EAKE G+TEP+P DDLSG DVARK++ILARESG +EL D+ + L+P
Sbjct: 650 EGILLSQATREAKELGFTEPNPCDDLSGIDVARKLLILARESGYNIELKDIKIEPLLPNN 709
Query: 121 LKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHP 180
K ++F+ +L + D + + ++A + G VLR+V ++ ++ ++L ++P
Sbjct: 710 FKIYEDTDKFLLKLKELDVYFSNKIKQALNVGNVLRFVATIEQ-KRQFFIKLEEVNINNP 768
Query: 181 FAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLAS 228
++ +N +AF T Y+ PL++RG GAG VTA G+FSD+LR S
Sbjct: 769 LYKVKNGENALAFYTNYYQPIPLVLRGYGAGNNVTASGVFSDLLRTLS 816
>sp|P52985|DHOM_LACLC Homoserine dehydrogenase OS=Lactococcus lactis subsp. cremoris
GN=hom PE=3 SV=1
Length = 428
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 113/229 (49%), Gaps = 28/229 (12%)
Query: 2 LKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFVG 61
++LRSL +K + +YEA V G+PI+ TL + D I + GI +GT +++
Sbjct: 114 VELRSLAQKHHVALYYEAAVAGGIPILRTLANSFSS-DKITHLLGILNGTSNFMMTKMSE 172
Query: 62 T-RSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARES-GLKLELSDLPVRSLVPE 119
++ E +A+A+E GY E DP +D+ G D + K+ IL+ + G+ L D+
Sbjct: 173 EGWTYDESLAKAQELGYAESDPTNDVDGIDASYKLAILSEFAFGMTLAPDDI-------- 224
Query: 120 PLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKE--GRVELRRYKK 177
A+ ++ + + D E+A+Q G VL+ G ++ ++ V K
Sbjct: 225 -------AKSGLRSIQKTDVEIAQQ------FGYVLKLTGEINEVDSGIFAEVSPTFLPK 271
Query: 178 DHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRL 226
HP A ++G N + ++ + + G GAG + TA + +DI+R+
Sbjct: 272 SHPLASVNGVMNAVFIESEGIGDS--VFYGAGAGQKPTATSVLADIVRI 318
>sp|Q9CGD8|DHOM_LACLA Homoserine dehydrogenase OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=hom PE=3 SV=1
Length = 428
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 26/227 (11%)
Query: 3 KLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFVG- 61
+LR+L K + +YEA V G+PI+ TL + D I + GI +GT +++
Sbjct: 115 ELRALAEKHHVALYYEAAVAGGIPILRTLANSF-SSDKITHLLGILNGTSNFMMTKMSEE 173
Query: 62 TRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEPL 121
++ + +A+A+E GY E DP +D+ G D + K+ IL+ E + LS P+ +
Sbjct: 174 AWTYDQSLAKAQELGYAESDPTNDVDGIDASYKLAILS-EFAFGMTLS--------PDQI 224
Query: 122 KACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKE--GRVELRRYKKDH 179
++ + + D E+A+Q G VL+ G ++ + V K H
Sbjct: 225 SKSG-----LRTIQKTDVEIAQQ------FGYVLKLTGEINEVESGIFAEVSPTFLPKSH 273
Query: 180 PFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRL 226
P A ++G N + + + + G GAG + TA + +DI+R+
Sbjct: 274 PLASVNGVMNAVFIESDGIGDS--MFYGAGAGQKPTATSVLADIVRI 318
>sp|P19582|DHOM_BACSU Homoserine dehydrogenase OS=Bacillus subtilis (strain 168) GN=hom
PE=3 SV=2
Length = 433
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 16 FYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGTRS-FSEVVAEAKE 74
++EA+V G+PI+ TL L + D I ++ GI +GT +++ + +S + EV+ EA++
Sbjct: 127 YFEASVAGGIPILRTLEEGL-SSDRITKMMGIVNGTTNFILTKMIKEKSPYEEVLKEAQD 185
Query: 75 AGYTEPDPRDDLSGTDVARKVIILARES-GLKLELSDLPVRSLVPEPLKACASAEEFMKQ 133
G+ E DP D+ G D ARK+ ILAR + ++L D+ V+ + Q
Sbjct: 186 LGFAEADPTSDVEGLDAARKMAILARLGFSMNVDLEDVKVKGI---------------SQ 230
Query: 134 LPQFDEELAKQRQEAEDAGEVLRYVGVV--DAINKEGRVELRRYKKDHPFAQLSGSDNII 191
+ D +K+ G ++ +G+ D E V+ HP + + N +
Sbjct: 231 ITDEDISFSKR------LGYTMKLIGIAQRDGSKIEVSVQPTLLPDHHPLSAVHNEFNAV 284
Query: 192 AFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDIL 224
+ E + GPGAG+ TA + SD++
Sbjct: 285 YVYGEAVGET--MFYGPGAGSMPTATSVVSDLV 315
>sp|P56429|DHOM_HELPY Homoserine dehydrogenase OS=Helicobacter pylori (strain ATCC 700392
/ 26695) GN=hom PE=3 SV=1
Length = 421
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 32/217 (14%)
Query: 17 YEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNS-FVGTRSFSEVVAEAKEA 75
+EA+V G+PII L+ L + +HIL +GI +GT +Y+ + F SF + + +A+
Sbjct: 124 FEASVCGGIPIIKALKDGL-SANHILSFKGILNGTSNYILSQMFKNQASFKDALKDAQHL 182
Query: 76 GYTEPDPRDDLSGTDVARKVIILARES-GLKLELSDLPVRSLVPEPLKACASAEEFMKQL 134
GY E +P D+ G D A K++ILA + G+ +L ++ + E ++++
Sbjct: 183 GYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILI---------------EGIEKI 227
Query: 135 PQFDEELAKQRQEAEDAGEVLRYVGVV----DAINKEGRVELRRYKKDHPFAQLSGSDNI 190
D E AK+ G ++ +G+ D I E RV K + +++ G N
Sbjct: 228 EPDDMEFAKE------FGYSIKLLGIAKKHPDCI--ELRVHPSMIKNECMLSKVDGVMNA 279
Query: 191 IAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLA 227
I+ + E + G GAG + TA + SDI+ +A
Sbjct: 280 ISVIGDKVGET--LYYGAGAGGEPTASAVISDIIEIA 314
>sp|Q9ZL20|DHOM_HELPJ Homoserine dehydrogenase OS=Helicobacter pylori (strain J99) GN=hom
PE=3 SV=1
Length = 421
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 32/217 (14%)
Query: 17 YEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNS-FVGTRSFSEVVAEAKEA 75
+EA+V G+PII L+ L + +HIL +GI +GT +Y+ + F SF + + +A+
Sbjct: 124 FEASVCGGIPIIKALKDGL-SANHILSFKGILNGTSNYILSQMFKNQASFKDALKDAQHL 182
Query: 76 GYTEPDPRDDLSGTDVARKVIILARES-GLKLELSDLPVRSLVPEPLKACASAEEFMKQL 134
GY E +P D+ G D A K++ILA + G+ +L ++ + E ++++
Sbjct: 183 GYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILI---------------EGIEKI 227
Query: 135 PQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRY----KKDHPFAQLSGSDNI 190
D E AK+ G ++ +G+ A + +ELR + K + +++ G N
Sbjct: 228 EPDDMEFAKE------FGYSIKLLGI--AKKHQDCIELRVHPSMIKNECMLSKVDGVMNA 279
Query: 191 IAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLA 227
I+ + E + G GAG + TA + SDI+ +A
Sbjct: 280 ISVIGDKVGET--LYYGAGAGGEPTASAVISDIIEIA 314
>sp|Q58997|DHOM_METJA Homoserine dehydrogenase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=hom PE=3 SV=1
Length = 336
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 106/233 (45%), Gaps = 39/233 (16%)
Query: 1 YLKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFV 60
Y +L +K + +EA+VG +PII+ + L G+ IL I GI +GT +Y+
Sbjct: 130 YKELIEEAKKHGVIFRHEASVGGAMPIINLAKETL-AGNEILSIRGILNGTTNYILTKME 188
Query: 61 GT-RSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARE-SGLKLELSDLPVRS--- 115
F + EAKE G E DP D+ G D A K++ILA G+ + D+ V+
Sbjct: 189 KEGLDFETALKEAKELGIAETDPTQDIEGLDTAAKIVILANSIMGMNKTIKDVKVKGISR 248
Query: 116 LVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGR--VELR 173
+ PE L F LA +R G ++ +G + K+G VE
Sbjct: 249 ITPEAL--------F----------LANKR------GYTIKLIGQI----KDGYLIVEPM 280
Query: 174 RYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRL 226
D P + G+ N+ F T KE ++V G GAG TA I SD++ +
Sbjct: 281 LVPIDSPL-NVKGTLNVAMFETDLAKE--VVVVGRGAGPIETASAILSDLIHI 330
>sp|P52986|DHOM_SYNY3 Homoserine dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=hom PE=3 SV=1
Length = 433
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 32/226 (14%)
Query: 13 THYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGTRS-FSEVVAE 71
+ EA VG G+PII L+ L G+ I I GI +GT +Y+ + + F EV+
Sbjct: 121 VYVLLEAAVGGGIPIIKPLKQSL-GGNRIQSIVGILNGTTNYILSRMTSEGADFDEVLTA 179
Query: 72 AKEAGYTEPDPRDDLSGTDVARKVIILARES-GLKLELSDLPVRSLVPEPLKACASAEEF 130
A++ GY E DP D+ G D A K+ ILA G +++ D+ AC E
Sbjct: 180 AQQLGYAEADPSADVDGLDAADKIAILASLGFGGRVKREDV-----------AC----EG 224
Query: 131 MKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEG------RVELRRYKKDHPFAQL 184
++ + D A + G V++ + + D E RV KDHP A +
Sbjct: 225 IRSVSAVDIAYADRL------GFVIKLLAIADGNAGEDSEALQLRVHPTLIAKDHPLASV 278
Query: 185 SGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYL 230
+G N + T + ++ G GAGA TA + SD++ + +
Sbjct: 279 NGVYNGVLVTGDPLGQ--VMFYGRGAGAGPTASAVVSDVINIVGII 322
>sp|P08499|DHOM_CORGL Homoserine dehydrogenase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=hom PE=1 SV=1
Length = 445
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 31/217 (14%)
Query: 16 FYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGTRS-FSEVVAEAKE 74
++EA V +P++ LR L GD I + GI +GT +++ ++ T + +++ +AEA
Sbjct: 141 YFEAAVAGAIPVVGPLRRSL-AGDQIQSVMGIVNGTTNFILDAMDSTGADYADSLAEATR 199
Query: 75 AGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEPLKACASAEEFMKQL 134
GY E DP D+ G D A K ILA + + V C E + +
Sbjct: 200 LGYAEADPTADVEGHDAASKAAILA----------SIAFHTRVTADDVYC----EGISNI 245
Query: 135 PQFDEELAKQRQEAEDAGEVLRYVGVVDAI-NKEG------RVELRRYKKDHPFAQLSGS 187
D E A+Q AG ++ + + + NKEG RV HP A ++ S
Sbjct: 246 SAADIEAAQQ------AGHTIKLLAICEKFTNKEGKSAISARVHPTLLPVSHPLASVNKS 299
Query: 188 DNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDIL 224
N I + L+ G GAG TA + D++
Sbjct: 300 FNAIFVEAEAAGR--LMFYGNGAGGAPTASAVLGDVV 334
>sp|P29365|DHOM_PSEAE Homoserine dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=hom PE=3
SV=2
Length = 434
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 17 YEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSF-VGTRSFSEVVAEAKEA 75
+EA V G+P+I +R L + + I + GI +GT +++ + R+F +V+AEA+
Sbjct: 126 FEAAVAGGIPVIKAIREGL-SANRINWLAGIINGTGNFILSEMREKGRTFPDVLAEAQAL 184
Query: 76 GYTEPDPRDDLSGTDVARKVIILA 99
GY E DP D+ G D A K+ ILA
Sbjct: 185 GYAEADPTFDVEGIDAAHKLTILA 208
>sp|P46806|DHOM_MYCLE Homoserine dehydrogenase OS=Mycobacterium leprae (strain TN) GN=hom
PE=3 SV=1
Length = 441
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 3 KLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGT 62
+L ++ ++EA V +P+I L L GD +LR+ GI +GT +Y+ ++ T
Sbjct: 116 ELAQAAESAHVDLYFEAAVAGAIPVIRPLTQSL-AGDTVLRVAGIVNGTTNYILSAMDST 174
Query: 63 RS-FSEVVAEAKEAGYTEPDPRDDLSGTD 90
+ + +A A+ GY E DP D+ G D
Sbjct: 175 GADYDSALAGARALGYAEADPTADVEGHD 203
>sp|P63629|DHOM_MYCTU Homoserine dehydrogenase OS=Mycobacterium tuberculosis GN=hom PE=3
SV=1
Length = 441
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 3 KLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGT 62
+L ++ ++EA V +P+I L L GD +LR+ GI +GT +Y+ ++ T
Sbjct: 116 ELAQAAESAHVDLYFEAAVAGAIPVIRPLTQSL-AGDTVLRVAGIVNGTTNYILSAMDST 174
Query: 63 RS-FSEVVAEAKEAGYTEPDPRDDLSGTD 90
+ ++ +A+A GY E DP D+ G D
Sbjct: 175 GADYASALADASALGYAEADPTADVEGYD 203
>sp|P63630|DHOM_MYCBO Homoserine dehydrogenase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=hom PE=3 SV=1
Length = 441
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 3 KLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFVGT 62
+L ++ ++EA V +P+I L L GD +LR+ GI +GT +Y+ ++ T
Sbjct: 116 ELAQAAESAHVDLYFEAAVAGAIPVIRPLTQSL-AGDTVLRVAGIVNGTTNYILSAMDST 174
Query: 63 RS-FSEVVAEAKEAGYTEPDPRDDLSGTD 90
+ ++ +A+A GY E DP D+ G D
Sbjct: 175 GADYASALADASALGYAEADPTADVEGYD 203
>sp|P37144|DHON_METGL Homoserine dehydrogenase OS=Methylobacillus glycogenes GN=hom PE=3
SV=1
Length = 412
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 2 LKLRSLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYLFNSFVG 61
+K L+RK + + + P+ +R L + I I GI +GT +++ +
Sbjct: 113 MKFLPLRRKKASSSLLKLPLLVVSPLFKAVREGL-AANRIEWIAGIINGTTNFILSEMRE 171
Query: 62 T-RSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILA 99
+F++V+ EA+ GY E DP D+ G D A K++ILA
Sbjct: 172 KGLAFADVLKEAQRLGYAEADPTFDVEGIDAAHKLMILA 210
>sp|O54786|DFFA_MOUSE DNA fragmentation factor subunit alpha OS=Mus musculus GN=Dffa PE=1
SV=2
Length = 331
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Query: 54 YLFNSFVGTRSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKV------IILARESGLKLE 107
+++N G ++ V E+ EA EPD R + +VAR++ IIL E L+
Sbjct: 94 WIYNDSDGGTAW--VSQESFEAD--EPDSRAGVKWKNVARQLKEDLSSIILLSEEDLQA- 148
Query: 108 LSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKE 167
L D+P L E ++CA+ + L Q + QR+EA + ++L + A+ KE
Sbjct: 149 LIDIPCAELAQELCQSCATVQGLQSTLQQ----VLDQREEARQSKQLLEL--YLQALEKE 202
Query: 168 GRV 170
G +
Sbjct: 203 GNI 205
>sp|O31632|METC_BACSU Cystathionine beta-lyase MetC OS=Bacillus subtilis (strain 168)
GN=metC PE=1 SV=1
Length = 390
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 70/167 (41%), Gaps = 30/167 (17%)
Query: 23 AGLPIISTLRGLLETGDHILRIEGIFSGTLSYLF---------NSFVGTRSFSEVVAEAK 73
+G+ IST LL GDH+L E ++ GT + ++FV +EV K
Sbjct: 78 SGMAAISTAFLLLSQGDHVLVTEDVYGGTFRMVTEVLTRFGIEHTFVDMTDRNEVARSIK 137
Query: 74 ---EAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDLPVRSLVPEPLK-----ACA 125
+ Y E L TD+ + V+ LA+E+G L + + + PL
Sbjct: 138 PNTKVIYMETPSNPTLGITDI-KAVVQLAKENGCLTFLDNTFMTPALQRPLDLGVDIVLH 196
Query: 126 SAEEFMKQLPQF--------DEELAKQRQEAEDA-GEVLRYVGVVDA 163
SA +F+ DEEL KQ + ++A G VL GV D
Sbjct: 197 SATKFLSGHSDVLSGLAAVKDEELGKQLYKLQNAFGAVL---GVQDC 240
>sp|P11420|DA_DROME Protein daughterless OS=Drosophila melanogaster GN=da PE=1 SV=1
Length = 710
Score = 34.3 bits (77), Expect = 0.77, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 120 PLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDH 179
P + C+SA+E P K+R++A +A E +R + +A+ + GR+ + K D
Sbjct: 530 PRRYCSSADEDDDAEPAVKAIREKERRQANNARERIRIRDINEALKELGRMCMTHLKSDK 589
Query: 180 PFAQL 184
P +L
Sbjct: 590 PQTKL 594
>sp|Q55DV9|CGL_DICDI Cystathionine gamma-lyase OS=Dictyostelium discoideum GN=cysA PE=1
SV=1
Length = 387
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 17 YEATVGAGLPIISTLRGLLETGDHILRIEGIFSGTLSYL 55
Y + +GL ++T+ LL++GD ++ I+ ++ GT Y
Sbjct: 74 YALSFASGLATLTTITHLLKSGDEVISIDDVYGGTRRYF 112
>sp|Q6G091|DAPA_BARQU 4-hydroxy-tetrahydrodipicolinate synthase OS=Bartonella quintana
(strain Toulouse) GN=dapA PE=3 SV=1
Length = 294
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 158 VGVVDAINKEGRVELRRYKKDHPFAQLSGSDNI 190
+GV DA +K GRV +R K F QLSG D I
Sbjct: 159 IGVKDATSKIGRVSEQREKCGKDFIQLSGDDCI 191
>sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1
Length = 35213
Score = 32.0 bits (71), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 63 RSFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELS--DLPVRSLVPEP 120
R E A A+E G EP P T VA + + + +E + + ++ + P R+ VPE
Sbjct: 10487 RPVPEKRAPAEEVGIEEPPP------TKVAERHMKITQEEKVLVAVTKKEAPPRARVPEE 10540
Query: 121 LKACASAEEFMKQLPQFDEE 140
K A E F K P+ +EE
Sbjct: 10541 PKKVAPEERFPKLKPRREEE 10560
>sp|Q80UK7|SAS6_MOUSE Spindle assembly abnormal protein 6 homolog OS=Mus musculus
GN=Sass6 PE=2 SV=2
Length = 654
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 132 KQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNII 191
K L + +E L K+R+E++DAG+ LR + + ++E K + L ++ +I
Sbjct: 413 KLLAEKEEMLQKERKESQDAGQFLR-AKEQEVCRLQEQLETTVQKLEESKQLLKNNEKLI 471
Query: 192 AFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILR 225
+ K E L+ + G T + +R
Sbjct: 472 TWLNKELNENQLVRKQDTLGTSATPHSTSNSTIR 505
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,003,587
Number of Sequences: 539616
Number of extensions: 3809330
Number of successful extensions: 12209
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 12109
Number of HSP's gapped (non-prelim): 95
length of query: 234
length of database: 191,569,459
effective HSP length: 114
effective length of query: 120
effective length of database: 130,053,235
effective search space: 15606388200
effective search space used: 15606388200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)