Query 035488
Match_columns 408
No_of_seqs 172 out of 2076
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 04:49:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035488.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035488hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a9w_A Monooxygenase; baeyer-v 100.0 1.3E-40 4.4E-45 312.1 25.9 331 18-388 2-353 (357)
2 2xve_A Flavin-containing monoo 100.0 3.5E-39 1.2E-43 311.7 25.2 294 20-387 3-341 (464)
3 3gwf_A Cyclohexanone monooxyge 100.0 1.9E-39 6.4E-44 318.0 19.4 355 19-386 8-456 (540)
4 3uox_A Otemo; baeyer-villiger 100.0 3.9E-38 1.3E-42 309.0 20.6 356 19-386 9-465 (545)
5 4ap3_A Steroid monooxygenase; 100.0 4.4E-37 1.5E-41 301.8 25.1 355 19-385 21-469 (549)
6 1w4x_A Phenylacetone monooxyge 100.0 3.7E-37 1.3E-41 303.4 22.7 357 19-387 16-466 (542)
7 2gv8_A Monooxygenase; FMO, FAD 100.0 1.6E-36 5.6E-41 292.6 23.4 287 19-386 6-361 (447)
8 3lzw_A Ferredoxin--NADP reduct 100.0 4.6E-38 1.6E-42 291.9 10.1 289 19-391 7-319 (332)
9 3f8d_A Thioredoxin reductase ( 100.0 3.2E-36 1.1E-40 278.3 19.3 282 19-391 15-321 (323)
10 2zbw_A Thioredoxin reductase; 100.0 3.3E-37 1.1E-41 286.6 11.4 294 19-392 5-322 (335)
11 2q7v_A Thioredoxin reductase; 100.0 2.6E-36 8.9E-41 279.3 14.4 282 19-390 8-315 (325)
12 3itj_A Thioredoxin reductase 1 100.0 6.6E-37 2.3E-41 284.8 10.1 286 18-389 21-337 (338)
13 3ab1_A Ferredoxin--NADP reduct 100.0 2.7E-36 9.1E-41 283.3 12.2 294 19-391 14-332 (360)
14 3fbs_A Oxidoreductase; structu 100.0 3.7E-36 1.3E-40 274.5 12.7 277 19-389 2-294 (297)
15 2q0l_A TRXR, thioredoxin reduc 100.0 3.4E-36 1.2E-40 276.8 12.5 280 19-388 1-310 (311)
16 4gcm_A TRXR, thioredoxin reduc 100.0 1.7E-35 5.9E-40 272.2 16.4 282 19-390 6-309 (312)
17 4eqs_A Coenzyme A disulfide re 100.0 2.1E-36 7.3E-41 290.1 10.0 288 20-385 1-311 (437)
18 3r9u_A Thioredoxin reductase; 100.0 7.6E-36 2.6E-40 274.8 12.3 282 19-388 4-313 (315)
19 2a87_A TRXR, TR, thioredoxin r 100.0 4.5E-36 1.6E-40 278.9 10.7 284 18-392 13-321 (335)
20 3d1c_A Flavin-containing putat 100.0 1.5E-34 5.2E-39 272.2 20.5 298 18-388 3-340 (369)
21 1vdc_A NTR, NADPH dependent th 100.0 1.6E-35 5.6E-40 274.9 13.0 286 19-394 8-330 (333)
22 3cty_A Thioredoxin reductase; 100.0 1.8E-35 6.2E-40 272.9 12.9 285 19-388 16-317 (319)
23 4fk1_A Putative thioredoxin re 100.0 2.2E-35 7.5E-40 270.4 12.4 283 17-389 4-302 (304)
24 1fl2_A Alkyl hydroperoxide red 100.0 3.2E-35 1.1E-39 270.2 12.1 284 20-389 2-307 (310)
25 4a5l_A Thioredoxin reductase; 100.0 2.4E-35 8.1E-40 271.5 11.0 285 19-388 4-313 (314)
26 1trb_A Thioredoxin reductase; 100.0 2.7E-35 9.4E-40 271.9 9.9 284 19-390 5-317 (320)
27 3klj_A NAD(FAD)-dependent dehy 100.0 1.4E-35 4.8E-40 279.4 5.6 272 18-385 8-294 (385)
28 3ef6_A Toluene 1,2-dioxygenase 100.0 5.6E-35 1.9E-39 278.5 9.4 280 20-385 3-309 (410)
29 3lxd_A FAD-dependent pyridine 100.0 1.4E-34 4.7E-39 276.5 10.5 282 19-385 9-321 (415)
30 2gqw_A Ferredoxin reductase; f 100.0 1.9E-33 6.4E-38 267.6 16.5 278 19-385 7-308 (408)
31 3oc4_A Oxidoreductase, pyridin 100.0 4.8E-33 1.6E-37 268.6 19.3 285 20-385 3-314 (452)
32 3iwa_A FAD-dependent pyridine 100.0 9.8E-34 3.3E-38 275.0 14.5 291 19-385 3-329 (472)
33 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.5E-33 5.1E-38 276.1 15.8 286 18-389 211-518 (521)
34 1xhc_A NADH oxidase /nitrite r 100.0 9.7E-35 3.3E-39 272.4 6.3 275 19-385 8-297 (367)
35 2bc0_A NADH oxidase; flavoprot 100.0 1.6E-33 5.6E-38 274.4 13.1 287 19-385 35-361 (490)
36 3ntd_A FAD-dependent pyridine 100.0 7.8E-34 2.7E-38 282.1 10.8 286 19-385 1-338 (565)
37 3kd9_A Coenzyme A disulfide re 100.0 2.1E-33 7.1E-38 271.0 13.5 283 18-385 2-315 (449)
38 3ics_A Coenzyme A-disulfide re 100.0 1.4E-33 4.7E-38 281.2 12.6 291 16-384 33-352 (588)
39 3fg2_P Putative rubredoxin red 100.0 6.3E-34 2.2E-38 270.9 9.0 280 20-385 2-310 (404)
40 3urh_A Dihydrolipoyl dehydroge 100.0 1.1E-33 3.7E-38 276.0 10.8 296 16-385 22-363 (491)
41 3l8k_A Dihydrolipoyl dehydroge 100.0 8.7E-33 3E-37 267.7 14.8 285 20-385 5-333 (466)
42 1mo9_A ORF3; nucleotide bindin 100.0 1.3E-32 4.6E-37 269.8 15.1 287 19-384 43-377 (523)
43 1q1r_A Putidaredoxin reductase 100.0 3.7E-33 1.3E-37 267.4 9.7 283 19-385 4-319 (431)
44 1zmd_A Dihydrolipoyl dehydroge 100.0 2.1E-32 7.3E-37 265.7 14.1 292 19-385 6-345 (474)
45 2wpf_A Trypanothione reductase 100.0 3.2E-33 1.1E-37 272.2 7.6 289 19-384 7-354 (495)
46 2cdu_A NADPH oxidase; flavoenz 100.0 1.7E-32 5.8E-37 264.8 12.6 288 20-384 1-316 (452)
47 2hqm_A GR, grase, glutathione 100.0 5.7E-33 2E-37 269.8 9.1 288 19-385 11-347 (479)
48 2a8x_A Dihydrolipoyl dehydroge 100.0 3.7E-32 1.3E-36 263.3 14.4 289 19-384 3-333 (464)
49 1onf_A GR, grase, glutathione 100.0 1.8E-32 6.3E-37 267.5 12.0 285 20-384 3-370 (500)
50 3dk9_A Grase, GR, glutathione 100.0 4.3E-32 1.5E-36 263.9 14.3 287 18-385 19-356 (478)
51 1ojt_A Surface protein; redox- 100.0 1.7E-32 5.7E-37 266.8 11.0 291 19-384 6-348 (482)
52 1xdi_A RV3303C-LPDA; reductase 100.0 1.1E-32 3.6E-37 269.4 9.0 293 20-385 3-342 (499)
53 1ges_A Glutathione reductase; 100.0 2.3E-32 7.7E-37 263.5 11.1 283 19-384 4-327 (450)
54 2eq6_A Pyruvate dehydrogenase 100.0 3.9E-32 1.3E-36 262.9 12.7 283 19-384 6-333 (464)
55 2vdc_G Glutamate synthase [NAD 100.0 4.4E-33 1.5E-37 267.4 5.9 274 18-390 121-447 (456)
56 1v59_A Dihydrolipoamide dehydr 100.0 5.8E-32 2E-36 263.1 13.8 291 19-384 5-349 (478)
57 1dxl_A Dihydrolipoamide dehydr 100.0 7.4E-32 2.5E-36 261.9 14.4 291 19-384 6-341 (470)
58 3lad_A Dihydrolipoamide dehydr 100.0 1.3E-31 4.5E-36 260.4 16.1 292 19-385 3-343 (476)
59 3cgb_A Pyridine nucleotide-dis 100.0 3.5E-32 1.2E-36 264.3 11.6 287 19-384 36-352 (480)
60 1ebd_A E3BD, dihydrolipoamide 100.0 1.3E-31 4.6E-36 258.8 15.5 288 19-384 3-332 (455)
61 1fec_A Trypanothione reductase 100.0 1.5E-32 5.1E-37 267.3 8.7 290 19-384 3-350 (490)
62 2r9z_A Glutathione amide reduc 100.0 1.3E-32 4.5E-37 265.9 8.2 283 19-384 4-326 (463)
63 4g6h_A Rotenone-insensitive NA 100.0 1.1E-32 3.8E-37 267.9 7.4 291 19-388 42-402 (502)
64 1nhp_A NADH peroxidase; oxidor 100.0 1E-31 3.5E-36 259.0 13.8 286 20-384 1-315 (447)
65 1zk7_A HGII, reductase, mercur 100.0 1.1E-31 3.9E-36 260.2 13.6 289 19-385 4-334 (467)
66 2qae_A Lipoamide, dihydrolipoy 100.0 1.6E-32 5.5E-37 266.2 7.2 289 20-384 3-339 (468)
67 2v3a_A Rubredoxin reductase; a 100.0 3E-32 1E-36 257.6 8.5 277 19-384 4-305 (384)
68 3h8l_A NADH oxidase; membrane 100.0 4E-32 1.4E-36 259.1 9.4 285 19-388 1-337 (409)
69 4dna_A Probable glutathione re 100.0 1.4E-31 4.7E-36 259.2 12.0 284 19-385 5-331 (463)
70 3ic9_A Dihydrolipoamide dehydr 100.0 7.8E-32 2.7E-36 262.4 9.9 294 19-385 8-338 (492)
71 3o0h_A Glutathione reductase; 100.0 3E-31 1E-35 258.1 13.9 285 19-385 26-351 (484)
72 2yqu_A 2-oxoglutarate dehydrog 100.0 2.5E-31 8.5E-36 256.9 12.4 287 20-384 2-326 (455)
73 1lvl_A Dihydrolipoamide dehydr 100.0 5.3E-31 1.8E-35 254.5 14.6 282 19-384 5-329 (458)
74 3qfa_A Thioredoxin reductase 1 100.0 2.8E-31 9.6E-36 260.0 12.7 290 19-385 32-380 (519)
75 3dgz_A Thioredoxin reductase 2 100.0 2.6E-31 8.8E-36 258.9 10.8 290 19-385 6-352 (488)
76 4b1b_A TRXR, thioredoxin reduc 100.0 2.4E-30 8.2E-35 252.2 17.0 293 19-385 42-384 (542)
77 3sx6_A Sulfide-quinone reducta 100.0 5.6E-32 1.9E-36 260.0 3.8 305 19-406 4-361 (437)
78 3dgh_A TRXR-1, thioredoxin red 100.0 1.7E-30 5.8E-35 252.9 11.6 290 18-385 8-352 (483)
79 3s5w_A L-ornithine 5-monooxyge 100.0 3.9E-29 1.3E-33 242.4 20.9 310 19-366 30-420 (463)
80 4b63_A L-ornithine N5 monooxyg 100.0 5.9E-29 2E-33 242.2 19.8 334 18-364 38-457 (501)
81 1m6i_A Programmed cell death p 100.0 1.4E-30 4.8E-35 253.5 6.4 291 18-385 10-352 (493)
82 2x8g_A Thioredoxin glutathione 100.0 6.7E-30 2.3E-34 255.1 10.6 291 18-385 106-459 (598)
83 1lqt_A FPRA; NADP+ derivative, 100.0 2.3E-29 7.8E-34 241.9 9.7 302 18-389 2-389 (456)
84 3h28_A Sulfide-quinone reducta 100.0 7.7E-30 2.6E-34 244.7 5.6 298 20-406 3-349 (430)
85 3vrd_B FCCB subunit, flavocyto 100.0 2.6E-29 8.8E-34 239.1 8.4 289 20-391 3-328 (401)
86 1gte_A Dihydropyrimidine dehyd 99.9 4.9E-29 1.7E-33 261.3 6.9 274 19-388 187-509 (1025)
87 3hyw_A Sulfide-quinone reducta 99.9 5E-29 1.7E-33 238.7 5.1 291 20-392 3-338 (430)
88 1cjc_A Protein (adrenodoxin re 99.9 2.3E-28 8E-33 235.1 8.6 304 19-388 6-396 (460)
89 3k30_A Histamine dehydrogenase 99.9 3.3E-29 1.1E-33 253.3 -1.0 271 18-391 390-679 (690)
90 2gag_A Heterotetrameric sarcos 99.9 1E-27 3.4E-32 249.8 9.7 280 19-387 128-444 (965)
91 1o94_A Tmadh, trimethylamine d 99.9 5.7E-28 1.9E-32 245.2 1.4 276 19-389 389-702 (729)
92 1ps9_A 2,4-dienoyl-COA reducta 99.9 3.5E-26 1.2E-30 230.7 7.6 278 19-382 373-671 (671)
93 1y56_A Hypothetical protein PH 99.9 6.5E-26 2.2E-30 220.6 3.8 251 19-386 108-376 (493)
94 3fpz_A Thiazole biosynthetic e 99.7 9.6E-20 3.3E-24 168.0 -7.1 150 19-209 65-216 (326)
95 2ywl_A Thioredoxin reductase r 99.7 1.5E-16 5.1E-21 133.5 10.6 159 178-389 3-173 (180)
96 2gqf_A Hypothetical protein HI 99.4 3E-14 1E-18 134.5 2.2 171 19-204 4-259 (401)
97 2e5v_A L-aspartate oxidase; ar 99.4 5.3E-14 1.8E-18 135.8 2.3 35 21-56 1-35 (472)
98 3v76_A Flavoprotein; structura 99.2 6.6E-12 2.3E-16 118.9 6.3 120 19-148 27-190 (417)
99 3oz2_A Digeranylgeranylglycero 99.2 2.9E-11 9.9E-16 113.9 8.7 39 17-55 2-40 (397)
100 2cul_A Glucose-inhibited divis 99.2 4.1E-11 1.4E-15 104.4 7.8 170 177-386 4-231 (232)
101 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 5.8E-11 2E-15 109.9 7.9 116 19-143 1-163 (342)
102 1yvv_A Amine oxidase, flavin-c 99.1 2.2E-11 7.4E-16 112.3 4.6 118 20-145 3-162 (336)
103 2ywl_A Thioredoxin reductase r 99.1 9.5E-11 3.2E-15 97.8 7.9 101 19-143 1-108 (180)
104 3cgv_A Geranylgeranyl reductas 99.1 1.1E-10 3.6E-15 110.3 8.0 123 17-145 2-162 (397)
105 3ces_A MNMG, tRNA uridine 5-ca 99.1 3.5E-11 1.2E-15 118.1 4.0 158 19-207 28-221 (651)
106 2cul_A Glucose-inhibited divis 99.1 2.5E-11 8.5E-16 105.8 2.6 120 18-148 2-128 (232)
107 3nix_A Flavoprotein/dehydrogen 99.0 7.1E-10 2.4E-14 105.5 9.9 121 20-145 6-166 (421)
108 3rp8_A Flavoprotein monooxygen 99.0 2.7E-11 9.1E-16 114.9 -0.1 119 18-146 22-182 (407)
109 2qa1_A PGAE, polyketide oxygen 99.0 8.4E-10 2.9E-14 107.2 9.8 121 19-145 11-165 (500)
110 3fmw_A Oxygenase; mithramycin, 99.0 7.4E-10 2.5E-14 109.1 9.2 119 19-145 49-207 (570)
111 4dgk_A Phytoene dehydrogenase; 99.0 6.6E-10 2.3E-14 108.3 8.4 38 19-56 1-38 (501)
112 3ihg_A RDME; flavoenzyme, anth 99.0 2.1E-10 7.3E-15 112.6 4.4 121 19-145 5-183 (535)
113 2vou_A 2,6-dihydroxypyridine h 99.0 3.8E-10 1.3E-14 106.6 5.8 118 19-146 5-154 (397)
114 2qa2_A CABE, polyketide oxygen 99.0 1.4E-09 4.8E-14 105.6 9.8 121 19-145 12-166 (499)
115 3nlc_A Uncharacterized protein 99.0 1.8E-09 6.3E-14 105.1 10.3 119 19-145 107-277 (549)
116 2bry_A NEDD9 interacting prote 99.0 2.3E-10 7.9E-15 111.0 4.0 127 18-147 91-232 (497)
117 2i0z_A NAD(FAD)-utilizing dehy 99.0 5.4E-10 1.8E-14 107.1 6.5 120 19-146 26-192 (447)
118 1rp0_A ARA6, thiazole biosynth 98.9 1.4E-09 4.9E-14 97.6 8.3 121 19-143 39-189 (284)
119 4hb9_A Similarities with proba 98.9 5.1E-09 1.7E-13 99.1 11.8 34 21-54 3-36 (412)
120 2zxi_A TRNA uridine 5-carboxym 98.9 2.8E-09 9.4E-14 104.4 10.0 158 19-207 27-220 (637)
121 2x3n_A Probable FAD-dependent 98.9 6.6E-10 2.3E-14 105.0 5.0 119 19-146 6-167 (399)
122 3i3l_A Alkylhalidase CMLS; fla 98.9 3.6E-09 1.2E-13 104.5 10.3 124 17-145 21-188 (591)
123 2xdo_A TETX2 protein; tetracyc 98.9 3.8E-09 1.3E-13 99.7 9.9 119 18-146 25-183 (398)
124 3nyc_A D-arginine dehydrogenas 98.9 2.4E-09 8.3E-14 100.3 7.9 37 18-55 8-44 (381)
125 3alj_A 2-methyl-3-hydroxypyrid 98.9 2.9E-10 1E-14 106.6 1.0 117 17-145 9-160 (379)
126 1y0p_A Fumarate reductase flav 98.9 1.6E-08 5.6E-13 99.9 13.0 39 19-57 126-164 (571)
127 3dme_A Conserved exported prot 98.9 9.6E-09 3.3E-13 95.6 10.8 37 19-55 4-40 (369)
128 3e1t_A Halogenase; flavoprotei 98.9 8.3E-09 2.8E-13 100.6 10.5 34 19-52 7-40 (512)
129 2uzz_A N-methyl-L-tryptophan o 98.9 4E-09 1.4E-13 98.5 7.9 35 20-54 3-37 (372)
130 3kkj_A Amine oxidase, flavin-c 98.9 2.8E-09 9.4E-14 95.1 6.5 41 20-60 3-43 (336)
131 2gmh_A Electron transfer flavo 98.8 1.7E-08 5.7E-13 99.8 12.5 38 19-56 35-78 (584)
132 3ps9_A TRNA 5-methylaminomethy 98.8 4.3E-09 1.5E-13 106.3 8.4 36 20-55 273-308 (676)
133 3da1_A Glycerol-3-phosphate de 98.8 9.1E-09 3.1E-13 101.2 9.9 39 18-56 17-55 (561)
134 3dje_A Fructosyl amine: oxygen 98.8 1.6E-08 5.3E-13 96.8 11.0 38 19-56 6-44 (438)
135 1qo8_A Flavocytochrome C3 fuma 98.8 2E-08 6.9E-13 99.1 11.7 38 19-56 121-158 (566)
136 3pvc_A TRNA 5-methylaminomethy 98.8 1.2E-08 4.3E-13 103.0 10.4 37 19-55 264-300 (689)
137 3cp8_A TRNA uridine 5-carboxym 98.8 1.6E-09 5.5E-14 106.4 3.8 158 19-207 21-215 (641)
138 2r0c_A REBC; flavin adenine di 98.8 3.8E-08 1.3E-12 96.8 13.3 37 19-55 26-62 (549)
139 3jsk_A Cypbp37 protein; octame 98.8 7E-09 2.4E-13 94.3 7.5 41 19-59 79-122 (344)
140 1k0i_A P-hydroxybenzoate hydro 98.8 3E-09 1E-13 100.3 5.2 122 20-147 3-165 (394)
141 3atr_A Conserved archaeal prot 98.8 4.3E-09 1.5E-13 101.1 6.4 122 19-146 6-163 (453)
142 2qcu_A Aerobic glycerol-3-phos 98.8 1.8E-08 6E-13 98.0 10.6 38 19-56 3-40 (501)
143 3c96_A Flavin-containing monoo 98.8 1.6E-08 5.5E-13 95.8 9.5 37 19-55 4-41 (410)
144 1y56_B Sarcosine oxidase; dehy 98.7 2.1E-08 7E-13 94.0 7.8 34 19-52 5-38 (382)
145 1ryi_A Glycine oxidase; flavop 98.7 2.8E-08 9.7E-13 93.1 8.7 37 19-55 17-53 (382)
146 2dkh_A 3-hydroxybenzoate hydro 98.7 5.2E-08 1.8E-12 97.5 10.4 37 19-55 32-69 (639)
147 2gjc_A Thiazole biosynthetic e 98.7 6.1E-08 2.1E-12 87.6 9.7 40 20-59 66-108 (326)
148 1d4d_A Flavocytochrome C fumar 98.7 1.1E-07 3.7E-12 93.9 12.3 39 19-57 126-164 (572)
149 2oln_A NIKD protein; flavoprot 98.7 4.5E-08 1.5E-12 92.2 8.8 36 20-55 5-40 (397)
150 4at0_A 3-ketosteroid-delta4-5a 98.7 2.4E-08 8.3E-13 97.3 6.7 38 19-56 41-78 (510)
151 2gf3_A MSOX, monomeric sarcosi 98.6 5.3E-08 1.8E-12 91.4 8.2 37 19-55 3-39 (389)
152 2gag_B Heterotetrameric sarcos 98.5 4.3E-08 1.5E-12 92.6 4.9 36 19-54 21-58 (405)
153 1pn0_A Phenol 2-monooxygenase; 98.5 3.8E-07 1.3E-11 91.5 11.2 36 19-54 8-48 (665)
154 2aqj_A Tryptophan halogenase, 98.5 2.5E-08 8.4E-13 98.0 1.2 34 19-52 5-41 (538)
155 2eq6_A Pyruvate dehydrogenase 98.5 7.7E-08 2.6E-12 92.6 4.5 106 18-150 168-274 (464)
156 2yqu_A 2-oxoglutarate dehydrog 98.5 3.2E-08 1.1E-12 95.0 1.8 100 19-149 167-266 (455)
157 1chu_A Protein (L-aspartate ox 98.5 1.8E-07 6.3E-12 91.5 7.1 37 19-56 8-44 (540)
158 4gut_A Lysine-specific histone 98.5 4.5E-07 1.5E-11 92.0 10.1 39 18-56 335-373 (776)
159 2rgh_A Alpha-glycerophosphate 98.5 2.7E-07 9.3E-12 90.9 8.1 38 19-56 32-69 (571)
160 3c4n_A Uncharacterized protein 98.5 1.3E-07 4.3E-12 89.4 5.4 35 20-54 37-73 (405)
161 2wdq_A Succinate dehydrogenase 98.4 1.1E-06 3.9E-11 86.7 12.2 37 19-55 7-43 (588)
162 1kf6_A Fumarate reductase flav 98.4 1.1E-06 3.9E-11 86.9 11.5 36 19-54 5-42 (602)
163 2h88_A Succinate dehydrogenase 98.4 1.3E-06 4.4E-11 86.6 11.5 37 19-55 18-54 (621)
164 3s5w_A L-ornithine 5-monooxyge 98.4 1.9E-06 6.5E-11 82.8 12.0 156 19-184 227-417 (463)
165 1nhp_A NADH peroxidase; oxidor 98.4 7.1E-08 2.4E-12 92.4 1.4 102 18-150 148-249 (447)
166 1ebd_A E3BD, dihydrolipoamide 98.4 1.5E-07 5.3E-12 90.3 3.6 103 19-149 170-272 (455)
167 1jnr_A Adenylylsulfate reducta 98.4 1.8E-06 6.3E-11 86.2 11.4 36 19-54 22-61 (643)
168 1rp0_A ARA6, thiazole biosynth 98.3 1E-06 3.4E-11 78.9 8.0 190 177-388 40-276 (284)
169 1pj5_A N,N-dimethylglycine oxi 98.3 4.4E-07 1.5E-11 93.7 6.5 35 19-53 4-39 (830)
170 4gde_A UDP-galactopyranose mut 98.3 2.7E-07 9.1E-12 90.0 4.4 40 19-58 10-50 (513)
171 1v59_A Dihydrolipoamide dehydr 98.3 1.9E-07 6.6E-12 90.2 3.4 105 19-149 183-289 (478)
172 1ges_A Glutathione reductase; 98.3 1.5E-07 5.1E-12 90.2 2.4 101 19-149 167-267 (450)
173 2r9z_A Glutathione amide reduc 98.3 1.6E-07 5.4E-12 90.3 2.5 100 19-149 166-266 (463)
174 2v3a_A Rubredoxin reductase; a 98.3 2.1E-06 7.1E-11 80.4 10.1 97 19-143 145-241 (384)
175 2bcg_G Secretory pathway GDP d 98.3 5.2E-07 1.8E-11 86.5 5.9 42 19-60 11-52 (453)
176 2b9w_A Putative aminooxidase; 98.3 8.4E-07 2.9E-11 84.3 6.8 47 19-65 6-53 (424)
177 1lvl_A Dihydrolipoamide dehydr 98.3 1.8E-07 6.1E-12 89.9 2.0 101 19-150 171-271 (458)
178 3ic9_A Dihydrolipoamide dehydr 98.3 4.3E-07 1.5E-11 88.0 4.6 104 19-150 174-277 (492)
179 3k7m_X 6-hydroxy-L-nicotine ox 98.3 4.4E-07 1.5E-11 86.4 4.4 38 20-57 2-39 (431)
180 3urh_A Dihydrolipoyl dehydroge 98.3 5.1E-07 1.7E-11 87.5 4.6 104 19-149 198-302 (491)
181 1onf_A GR, grase, glutathione 98.3 4.1E-07 1.4E-11 88.4 3.8 101 19-149 176-277 (500)
182 4b1b_A TRXR, thioredoxin reduc 98.3 3.8E-07 1.3E-11 88.8 3.6 101 18-150 222-322 (542)
183 1ojt_A Surface protein; redox- 98.3 1.9E-07 6.4E-12 90.3 1.4 104 19-149 185-288 (482)
184 2e1m_A L-glutamate oxidase; L- 98.3 6.2E-07 2.1E-11 83.1 4.8 42 19-60 44-86 (376)
185 3nrn_A Uncharacterized protein 98.2 7.8E-07 2.7E-11 84.4 5.0 39 21-59 2-40 (421)
186 1rsg_A FMS1 protein; FAD bindi 98.2 6.6E-07 2.3E-11 87.3 4.5 39 19-57 8-47 (516)
187 3hyw_A Sulfide-quinone reducta 98.2 1.3E-06 4.3E-11 83.2 6.2 103 177-327 3-110 (430)
188 2qae_A Lipoamide, dihydrolipoy 98.2 4.8E-07 1.6E-11 87.1 3.2 104 19-149 174-278 (468)
189 4eqs_A Coenzyme A disulfide re 98.2 6.3E-07 2.2E-11 85.4 4.0 95 19-148 147-241 (437)
190 3hdq_A UDP-galactopyranose mut 98.2 9.4E-07 3.2E-11 82.5 5.0 42 19-60 29-70 (397)
191 1dxl_A Dihydrolipoamide dehydr 98.2 3.6E-07 1.2E-11 88.1 2.2 104 19-149 177-281 (470)
192 3lad_A Dihydrolipoamide dehydr 98.2 5.3E-07 1.8E-11 87.0 3.2 103 19-149 180-282 (476)
193 3lov_A Protoporphyrinogen oxid 98.2 1.1E-06 3.7E-11 84.9 5.3 44 17-60 2-47 (475)
194 3ka7_A Oxidoreductase; structu 98.2 8.4E-07 2.9E-11 84.3 4.5 39 20-58 1-39 (425)
195 1v0j_A UDP-galactopyranose mut 98.2 1.2E-06 4E-11 82.5 5.4 42 19-60 7-49 (399)
196 2a8x_A Dihydrolipoyl dehydroge 98.2 4.9E-07 1.7E-11 87.0 2.8 103 19-149 171-273 (464)
197 1zk7_A HGII, reductase, mercur 98.2 4.6E-07 1.6E-11 87.2 2.5 94 19-143 176-269 (467)
198 2yg5_A Putrescine oxidase; oxi 98.2 1.1E-06 3.9E-11 84.1 5.3 41 19-59 5-45 (453)
199 1zmd_A Dihydrolipoyl dehydroge 98.2 7.4E-07 2.5E-11 86.0 3.7 106 19-149 178-284 (474)
200 3klj_A NAD(FAD)-dependent dehy 98.2 3.9E-06 1.3E-10 78.5 8.5 108 175-329 8-119 (385)
201 2bi7_A UDP-galactopyranose mut 98.2 1.1E-06 3.9E-11 82.1 4.8 42 19-60 3-44 (384)
202 3cgb_A Pyridine nucleotide-dis 98.2 2.8E-07 9.5E-12 89.1 0.6 96 18-143 185-280 (480)
203 1xdi_A RV3303C-LPDA; reductase 98.2 6.2E-07 2.1E-11 87.1 3.0 96 19-143 182-277 (499)
204 1sez_A Protoporphyrinogen oxid 98.2 1.2E-06 4.3E-11 85.1 5.1 43 19-61 13-55 (504)
205 4dsg_A UDP-galactopyranose mut 98.2 2.4E-06 8E-11 82.6 7.0 49 19-67 9-59 (484)
206 1fec_A Trypanothione reductase 98.2 5.4E-07 1.8E-11 87.3 2.4 101 19-149 187-290 (490)
207 1mo9_A ORF3; nucleotide bindin 98.2 6.1E-07 2.1E-11 87.6 2.7 99 20-148 215-317 (523)
208 1s3e_A Amine oxidase [flavin-c 98.1 1.5E-06 5.1E-11 84.9 5.2 39 19-57 4-42 (520)
209 2wpf_A Trypanothione reductase 98.1 5.8E-07 2E-11 87.1 2.2 101 19-149 191-294 (495)
210 3oc4_A Oxidoreductase, pyridin 98.1 1.2E-05 4.1E-10 76.9 11.1 101 19-150 147-247 (452)
211 3lxd_A FAD-dependent pyridine 98.1 7.3E-06 2.5E-10 77.5 9.3 101 19-148 152-252 (415)
212 3i6d_A Protoporphyrinogen oxid 98.1 1.1E-06 3.9E-11 84.4 3.7 40 19-58 5-50 (470)
213 2jae_A L-amino acid oxidase; o 98.1 2E-06 6.9E-11 83.3 5.4 40 19-58 11-50 (489)
214 3nks_A Protoporphyrinogen oxid 98.1 1.3E-06 4.3E-11 84.4 3.9 41 19-59 2-44 (477)
215 3iwa_A FAD-dependent pyridine 98.1 9.6E-07 3.3E-11 85.1 3.0 97 19-143 159-256 (472)
216 2hqm_A GR, grase, glutathione 98.1 9.1E-07 3.1E-11 85.4 2.7 103 19-149 185-287 (479)
217 3h8l_A NADH oxidase; membrane 98.1 6.7E-06 2.3E-10 77.6 8.7 104 177-328 2-115 (409)
218 2bc0_A NADH oxidase; flavoprot 98.1 6.5E-07 2.2E-11 86.7 1.7 101 18-149 193-293 (490)
219 2ivd_A PPO, PPOX, protoporphyr 98.1 2.1E-06 7.3E-11 82.8 5.2 40 19-58 16-55 (478)
220 3o0h_A Glutathione reductase; 98.1 7.7E-07 2.6E-11 86.1 2.0 100 19-149 191-290 (484)
221 3vrd_B FCCB subunit, flavocyto 98.1 4.6E-06 1.6E-10 78.5 7.3 105 175-328 1-110 (401)
222 3sx6_A Sulfide-quinone reducta 98.1 3.5E-06 1.2E-10 80.3 6.4 104 177-328 5-114 (437)
223 1i8t_A UDP-galactopyranose mut 98.1 1.9E-06 6.4E-11 80.1 4.4 40 20-59 2-41 (367)
224 3dk9_A Grase, GR, glutathione 98.1 1.7E-06 5.7E-11 83.6 3.9 110 19-150 187-296 (478)
225 3fg2_P Putative rubredoxin red 98.1 1E-05 3.6E-10 76.2 9.1 98 19-143 142-239 (404)
226 3ntd_A FAD-dependent pyridine 98.1 1.4E-06 4.9E-11 85.9 3.2 98 19-143 151-265 (565)
227 2gqw_A Ferredoxin reductase; f 98.1 1.1E-05 3.6E-10 76.2 9.1 93 19-143 145-237 (408)
228 1xhc_A NADH oxidase /nitrite r 98.1 3.8E-07 1.3E-11 84.8 -1.0 92 20-148 144-235 (367)
229 3dgh_A TRXR-1, thioredoxin red 98.1 2.3E-06 8E-11 82.6 4.5 105 19-149 187-291 (483)
230 2cdu_A NADPH oxidase; flavoenz 98.0 1E-06 3.5E-11 84.4 1.9 100 19-149 149-249 (452)
231 3ef6_A Toluene 1,2-dioxygenase 98.0 3.7E-06 1.3E-10 79.4 5.6 97 19-143 143-239 (410)
232 3dgz_A Thioredoxin reductase 2 98.0 3E-06 1E-10 82.0 4.9 105 19-149 185-289 (488)
233 1q1r_A Putidaredoxin reductase 98.0 1.4E-05 4.8E-10 76.0 9.3 98 19-143 149-248 (431)
234 2vvm_A Monoamine oxidase N; FA 98.0 3.3E-06 1.1E-10 81.9 4.8 39 20-58 40-78 (495)
235 3ihm_A Styrene monooxygenase A 98.0 2.6E-06 8.9E-11 81.0 3.7 34 19-52 22-55 (430)
236 3fbs_A Oxidoreductase; structu 98.0 1.2E-05 4.2E-10 72.0 7.8 33 177-209 3-35 (297)
237 2q7v_A Thioredoxin reductase; 98.0 4.5E-06 1.6E-10 76.1 4.7 99 19-149 152-251 (325)
238 1d5t_A Guanine nucleotide diss 98.0 5.2E-06 1.8E-10 79.0 5.3 42 19-60 6-47 (433)
239 1trb_A Thioredoxin reductase; 98.0 2.2E-06 7.6E-11 77.9 2.5 102 19-148 145-248 (320)
240 3h28_A Sulfide-quinone reducta 98.0 1.1E-05 3.7E-10 76.7 7.4 105 177-329 3-112 (430)
241 4dna_A Probable glutathione re 98.0 1.9E-06 6.6E-11 82.8 2.1 100 19-149 170-270 (463)
242 1fl2_A Alkyl hydroperoxide red 98.0 9.1E-06 3.1E-10 73.5 6.4 99 19-148 144-243 (310)
243 2a87_A TRXR, TR, thioredoxin r 98.0 5.7E-06 1.9E-10 75.8 5.0 98 19-149 155-254 (335)
244 1m6i_A Programmed cell death p 98.0 4.9E-06 1.7E-10 80.5 4.7 100 19-148 180-283 (493)
245 3ab1_A Ferredoxin--NADP reduct 98.0 5.7E-06 1.9E-10 76.6 4.9 103 19-149 163-265 (360)
246 1b37_A Protein (polyamine oxid 97.9 6.6E-06 2.3E-10 79.2 5.4 41 19-59 4-45 (472)
247 3g5s_A Methylenetetrahydrofola 97.9 8.6E-06 2.9E-10 74.7 5.5 37 19-55 1-37 (443)
248 3itj_A Thioredoxin reductase 1 97.9 8.8E-06 3E-10 74.4 5.7 96 19-143 173-269 (338)
249 2iid_A L-amino-acid oxidase; f 97.9 5.1E-06 1.7E-10 80.6 4.2 40 19-58 33-72 (498)
250 3qfa_A Thioredoxin reductase 1 97.9 7.1E-06 2.4E-10 79.9 5.1 106 19-149 210-317 (519)
251 3f8d_A Thioredoxin reductase ( 97.9 1.1E-05 3.7E-10 73.3 6.0 99 19-148 154-252 (323)
252 2q0l_A TRXR, thioredoxin reduc 97.9 8E-06 2.7E-10 73.9 4.9 100 19-149 143-243 (311)
253 3ics_A Coenzyme A-disulfide re 97.9 2.4E-06 8.2E-11 84.7 1.5 94 19-143 187-280 (588)
254 2zbw_A Thioredoxin reductase; 97.9 4.9E-06 1.7E-10 76.2 3.3 102 19-149 152-254 (335)
255 1vdc_A NTR, NADPH dependent th 97.9 1.2E-05 4E-10 73.6 5.8 101 19-149 159-261 (333)
256 3c4a_A Probable tryptophan hyd 97.9 7.1E-06 2.4E-10 76.7 4.1 34 21-54 2-37 (381)
257 3p1w_A Rabgdi protein; GDI RAB 97.9 9.6E-06 3.3E-10 77.3 4.9 41 19-59 20-60 (475)
258 3axb_A Putative oxidoreductase 97.9 6.9E-06 2.4E-10 78.5 3.9 38 17-54 21-59 (448)
259 3cty_A Thioredoxin reductase; 97.9 8.2E-06 2.8E-10 74.2 4.1 95 19-143 155-250 (319)
260 3t37_A Probable dehydrogenase; 97.9 3.7E-05 1.3E-09 75.1 9.0 35 19-53 17-52 (526)
261 2xve_A Flavin-containing monoo 97.9 3.4E-05 1.1E-09 74.0 8.4 85 19-152 197-281 (464)
262 1c0p_A D-amino acid oxidase; a 97.8 1.3E-05 4.3E-10 74.4 5.2 34 19-52 6-39 (363)
263 2pyx_A Tryptophan halogenase; 97.8 8.8E-06 3E-10 79.5 4.2 34 19-52 7-52 (526)
264 3lzw_A Ferredoxin--NADP reduct 97.8 1.1E-05 3.8E-10 73.5 4.7 99 19-149 154-252 (332)
265 3kd9_A Coenzyme A disulfide re 97.8 6.4E-06 2.2E-10 78.8 3.1 95 19-143 148-242 (449)
266 3l8k_A Dihydrolipoyl dehydroge 97.8 4.8E-05 1.6E-09 73.0 9.2 103 19-150 172-275 (466)
267 2gv8_A Monooxygenase; FMO, FAD 97.8 5.2E-05 1.8E-09 72.4 9.1 84 19-151 212-296 (447)
268 4g6h_A Rotenone-insensitive NA 97.8 3.6E-05 1.2E-09 74.5 7.5 38 175-212 41-78 (502)
269 3r9u_A Thioredoxin reductase; 97.8 7.1E-06 2.4E-10 74.2 2.5 100 19-149 147-246 (315)
270 2xag_A Lysine-specific histone 97.8 1.6E-05 5.4E-10 81.4 5.1 39 19-57 278-316 (852)
271 3d1c_A Flavin-containing putat 97.8 2.6E-05 8.8E-10 72.3 6.1 104 19-149 166-274 (369)
272 2x8g_A Thioredoxin glutathione 97.8 1.5E-05 5.1E-10 79.2 4.4 105 19-149 286-397 (598)
273 2z3y_A Lysine-specific histone 97.8 1.6E-05 5.5E-10 79.8 4.6 41 19-59 107-147 (662)
274 2weu_A Tryptophan 5-halogenase 97.7 1.2E-05 3.9E-10 78.4 3.2 34 19-52 2-38 (511)
275 2e4g_A Tryptophan halogenase; 97.7 1.8E-05 6.2E-10 77.7 4.6 34 19-52 25-61 (550)
276 4a9w_A Monooxygenase; baeyer-v 97.7 2.8E-05 9.5E-10 71.6 5.6 33 177-209 4-36 (357)
277 3v76_A Flavoprotein; structura 97.7 3.3E-05 1.1E-09 72.8 6.1 34 176-209 27-60 (417)
278 3pl8_A Pyranose 2-oxidase; sub 97.7 2E-05 7E-10 78.2 4.5 40 19-58 46-85 (623)
279 3g3e_A D-amino-acid oxidase; F 97.7 1.4E-05 4.9E-10 73.6 3.1 33 21-53 2-40 (351)
280 4fk1_A Putative thioredoxin re 97.7 0.00013 4.4E-09 65.7 9.3 32 178-209 8-39 (304)
281 1hyu_A AHPF, alkyl hydroperoxi 97.7 5.6E-05 1.9E-09 73.6 7.0 95 19-142 355-450 (521)
282 2bry_A NEDD9 interacting prote 97.6 6.5E-05 2.2E-09 72.7 6.9 35 175-209 91-125 (497)
283 2bs2_A Quinol-fumarate reducta 97.6 2.9E-05 1E-09 77.4 4.4 36 19-54 5-40 (660)
284 4a5l_A Thioredoxin reductase; 97.6 4.6E-05 1.6E-09 68.9 5.3 102 19-150 152-253 (314)
285 2gqf_A Hypothetical protein HI 97.6 0.00014 4.7E-09 68.3 7.7 33 177-209 5-37 (401)
286 3nlc_A Uncharacterized protein 97.6 9.1E-05 3.1E-09 72.1 6.4 35 175-209 106-140 (549)
287 3gyx_A Adenylylsulfate reducta 97.5 6.3E-05 2.1E-09 75.0 5.1 37 19-55 22-64 (662)
288 4gcm_A TRXR, thioredoxin reduc 97.5 0.00011 3.7E-09 66.5 6.3 32 178-209 8-39 (312)
289 3jsk_A Cypbp37 protein; octame 97.5 0.00025 8.4E-09 64.4 8.5 33 177-209 80-114 (344)
290 3alj_A 2-methyl-3-hydroxypyrid 97.5 0.00018 6E-09 67.0 7.8 137 176-328 11-162 (379)
291 2vdc_G Glutamate synthase [NAD 97.4 0.00011 3.7E-09 70.2 4.9 35 19-53 264-299 (456)
292 3k30_A Histamine dehydrogenase 97.4 9E-05 3.1E-09 74.7 4.3 97 19-142 523-621 (690)
293 2i0z_A NAD(FAD)-utilizing dehy 97.4 0.00026 8.8E-09 67.5 7.1 148 177-326 27-191 (447)
294 2gag_A Heterotetrameric sarcos 97.4 0.00011 3.7E-09 76.9 4.7 95 20-148 285-384 (965)
295 3ayj_A Pro-enzyme of L-phenyla 97.3 6.3E-05 2.2E-09 75.0 1.8 36 19-54 56-100 (721)
296 1kdg_A CDH, cellobiose dehydro 97.3 0.00017 5.7E-09 70.7 4.3 34 19-52 7-40 (546)
297 3uox_A Otemo; baeyer-villiger 97.3 0.00066 2.2E-08 66.3 8.5 34 176-209 9-42 (545)
298 1vg0_A RAB proteins geranylger 97.2 0.00033 1.1E-08 69.0 5.9 45 19-63 8-52 (650)
299 4ap3_A Steroid monooxygenase; 97.2 0.00045 1.6E-08 67.5 6.7 34 176-209 21-54 (549)
300 3gwf_A Cyclohexanone monooxyge 97.2 0.00055 1.9E-08 66.8 7.1 33 177-209 9-42 (540)
301 2gjc_A Thiazole biosynthetic e 97.2 0.00037 1.3E-08 62.9 5.1 32 178-209 67-100 (326)
302 2x3n_A Probable FAD-dependent 97.2 0.0015 5.3E-08 61.0 9.6 33 177-209 7-39 (399)
303 1ju2_A HydroxynitrIle lyase; f 97.1 0.00016 5.4E-09 70.6 2.8 35 19-54 26-60 (536)
304 2vou_A 2,6-dihydroxypyridine h 97.1 0.00071 2.4E-08 63.3 7.1 34 176-209 5-38 (397)
305 3q9t_A Choline dehydrogenase a 97.1 0.00023 8E-09 69.8 3.7 35 19-53 6-41 (577)
306 1gte_A Dihydropyrimidine dehyd 97.1 0.0001 3.6E-09 77.5 1.0 35 175-209 186-221 (1025)
307 1n4w_A CHOD, cholesterol oxida 97.0 0.00051 1.8E-08 66.5 4.9 37 19-55 5-41 (504)
308 1lqt_A FPRA; NADP+ derivative, 97.0 0.00032 1.1E-08 67.0 3.0 34 176-209 3-43 (456)
309 1y56_B Sarcosine oxidase; dehy 97.0 0.0019 6.6E-08 59.9 8.3 33 177-209 6-38 (382)
310 3qvp_A Glucose oxidase; oxidor 97.0 0.00039 1.3E-08 68.2 3.7 34 19-52 19-53 (583)
311 1cjc_A Protein (adrenodoxin re 96.9 0.00027 9.4E-09 67.5 2.3 35 175-209 5-41 (460)
312 3ces_A MNMG, tRNA uridine 5-ca 96.9 0.0059 2E-07 60.2 11.6 33 177-209 29-61 (651)
313 1y0p_A Fumarate reductase flav 96.9 0.0048 1.7E-07 60.6 11.1 34 176-209 126-159 (571)
314 1o94_A Tmadh, trimethylamine d 96.9 0.00022 7.4E-09 72.4 1.1 100 19-142 528-643 (729)
315 3nix_A Flavoprotein/dehydrogen 96.9 0.0013 4.4E-08 61.9 6.4 33 177-209 6-38 (421)
316 1k0i_A P-hydroxybenzoate hydro 96.8 0.0035 1.2E-07 58.4 8.9 32 178-209 4-35 (394)
317 1coy_A Cholesterol oxidase; ox 96.8 0.00083 2.8E-08 65.0 4.6 35 19-53 11-45 (507)
318 1ps9_A 2,4-dienoyl-COA reducta 96.8 0.0015 5E-08 65.7 6.5 29 19-47 494-522 (671)
319 2xdo_A TETX2 protein; tetracyc 96.8 0.0044 1.5E-07 57.9 9.4 35 175-209 25-59 (398)
320 1qo8_A Flavocytochrome C3 fuma 96.8 0.0053 1.8E-07 60.3 10.0 33 177-209 122-154 (566)
321 3i3l_A Alkylhalidase CMLS; fla 96.8 0.0023 8E-08 63.0 7.4 35 175-209 22-56 (591)
322 3fmw_A Oxygenase; mithramycin, 96.8 0.00028 9.6E-09 69.3 0.8 33 177-209 50-82 (570)
323 1gpe_A Protein (glucose oxidas 96.8 0.00093 3.2E-08 65.9 4.4 36 18-53 23-59 (587)
324 1yvv_A Amine oxidase, flavin-c 96.7 0.0056 1.9E-07 55.5 9.4 33 177-209 3-35 (336)
325 3fim_B ARYL-alcohol oxidase; A 96.7 0.00047 1.6E-08 67.5 2.3 36 19-54 2-38 (566)
326 2zxi_A TRNA uridine 5-carboxym 96.7 0.0081 2.8E-07 59.0 10.7 33 177-209 28-60 (637)
327 3dfz_A SIRC, precorrin-2 dehyd 96.7 0.0029 9.9E-08 53.6 6.2 36 173-208 28-63 (223)
328 2g1u_A Hypothetical protein TM 96.6 0.0018 6.2E-08 51.7 4.4 34 19-52 19-52 (155)
329 1ryi_A Glycine oxidase; flavop 96.6 0.007 2.4E-07 56.0 9.1 34 176-209 17-50 (382)
330 2jbv_A Choline oxidase; alcoho 96.6 0.0011 3.9E-08 64.7 3.6 36 19-54 13-49 (546)
331 3e1t_A Halogenase; flavoprotei 96.6 0.0048 1.6E-07 59.8 8.0 33 177-209 8-40 (512)
332 4at0_A 3-ketosteroid-delta4-5a 96.6 0.01 3.4E-07 57.5 10.2 33 177-209 42-74 (510)
333 3cp8_A TRNA uridine 5-carboxym 96.6 0.0075 2.6E-07 59.4 9.2 34 176-209 21-54 (641)
334 2gag_B Heterotetrameric sarcos 96.6 0.0052 1.8E-07 57.4 7.9 33 177-209 22-56 (405)
335 4hb9_A Similarities with proba 96.5 0.0031 1.1E-07 58.9 6.3 32 178-209 3-34 (412)
336 2qa2_A CABE, polyketide oxygen 96.5 0.0049 1.7E-07 59.5 7.7 35 175-209 11-45 (499)
337 3rp8_A Flavoprotein monooxygen 96.5 0.0022 7.4E-08 60.2 5.0 35 175-209 22-56 (407)
338 3atr_A Conserved archaeal prot 96.5 0.0053 1.8E-07 58.5 7.7 33 177-209 7-39 (453)
339 1w4x_A Phenylacetone monooxyge 96.5 0.0088 3E-07 58.4 9.4 33 177-209 17-49 (542)
340 1id1_A Putative potassium chan 96.5 0.0038 1.3E-07 49.7 5.5 34 19-52 3-36 (153)
341 1d4d_A Flavocytochrome C fumar 96.5 0.0084 2.9E-07 58.9 9.0 34 176-209 126-159 (572)
342 3ihg_A RDME; flavoenzyme, anth 96.4 0.0041 1.4E-07 60.7 6.7 33 177-209 6-38 (535)
343 3llv_A Exopolyphosphatase-rela 96.4 0.0037 1.3E-07 48.9 5.1 34 19-52 6-39 (141)
344 3cgv_A Geranylgeranyl reductas 96.4 0.0015 5.2E-08 60.9 2.9 33 177-209 5-37 (397)
345 2qa1_A PGAE, polyketide oxygen 96.3 0.0057 1.9E-07 59.1 6.7 35 175-209 10-44 (500)
346 3fwz_A Inner membrane protein 96.3 0.0051 1.7E-07 48.1 5.1 33 20-52 8-40 (140)
347 3pvc_A TRNA 5-methylaminomethy 96.2 0.016 5.3E-07 58.4 9.5 34 176-209 264-297 (689)
348 4b63_A L-ornithine N5 monooxyg 96.2 0.011 3.7E-07 57.1 8.0 35 19-53 246-282 (501)
349 3qj4_A Renalase; FAD/NAD(P)-bi 96.2 0.0073 2.5E-07 55.1 6.4 33 177-209 2-37 (342)
350 2e5v_A L-aspartate oxidase; ar 96.0 0.021 7.2E-07 54.6 9.1 31 178-208 1-31 (472)
351 1lss_A TRK system potassium up 96.0 0.0062 2.1E-07 47.3 4.3 32 21-52 6-37 (140)
352 2hmt_A YUAA protein; RCK, KTN, 95.9 0.0078 2.7E-07 47.0 4.7 34 19-52 6-39 (144)
353 1y56_A Hypothetical protein PH 95.9 0.0066 2.3E-07 58.5 5.0 32 177-209 109-140 (493)
354 1chu_A Protein (L-aspartate ox 95.9 0.053 1.8E-06 52.7 11.2 32 177-209 9-40 (540)
355 3ic5_A Putative saccharopine d 95.8 0.006 2E-07 45.8 3.5 33 20-52 6-39 (118)
356 3kkj_A Amine oxidase, flavin-c 95.6 0.0055 1.9E-07 53.5 3.0 32 178-209 4-35 (336)
357 2wdq_A Succinate dehydrogenase 95.6 0.077 2.6E-06 52.2 11.4 32 178-209 9-40 (588)
358 1kf6_A Fumarate reductase flav 95.5 0.16 5.4E-06 50.1 13.0 32 178-209 7-40 (602)
359 4ffl_A PYLC; amino acid, biosy 95.4 0.014 4.8E-07 53.7 5.0 37 19-55 1-37 (363)
360 2h88_A Succinate dehydrogenase 95.4 0.092 3.1E-06 51.9 10.9 32 178-209 20-51 (621)
361 3c85_A Putative glutathione-re 95.4 0.016 5.4E-07 47.5 4.6 34 19-52 39-73 (183)
362 4e12_A Diketoreductase; oxidor 95.3 0.013 4.5E-07 51.9 4.3 34 19-52 4-37 (283)
363 3dfz_A SIRC, precorrin-2 dehyd 95.3 0.015 5.3E-07 49.1 4.5 34 19-52 31-64 (223)
364 3lk7_A UDP-N-acetylmuramoylala 95.3 0.012 4.2E-07 55.8 4.4 34 19-52 9-42 (451)
365 2bs2_A Quinol-fumarate reducta 95.3 0.22 7.7E-06 49.5 13.5 32 178-209 7-38 (660)
366 2x5o_A UDP-N-acetylmuramoylala 95.0 0.016 5.4E-07 54.9 4.1 36 19-54 5-40 (439)
367 3ado_A Lambda-crystallin; L-gu 94.8 0.024 8.2E-07 50.8 4.4 34 19-52 6-39 (319)
368 4dgk_A Phytoene dehydrogenase; 94.8 0.011 3.8E-07 57.0 2.4 33 177-209 2-34 (501)
369 1kyq_A Met8P, siroheme biosynt 94.7 0.015 5.2E-07 50.8 2.9 35 19-53 13-47 (274)
370 3l4b_C TRKA K+ channel protien 94.7 0.025 8.6E-07 47.8 4.2 32 21-52 2-33 (218)
371 3lk7_A UDP-N-acetylmuramoylala 94.7 0.047 1.6E-06 51.8 6.4 36 174-209 7-42 (451)
372 4dio_A NAD(P) transhydrogenase 94.6 0.024 8.2E-07 52.4 4.1 34 19-52 190-223 (405)
373 3g79_A NDP-N-acetyl-D-galactos 94.6 0.025 8.4E-07 53.8 4.3 47 7-53 6-54 (478)
374 2dpo_A L-gulonate 3-dehydrogen 94.6 0.029 9.8E-07 50.5 4.4 34 19-52 6-39 (319)
375 3ghy_A Ketopantoate reductase 94.5 0.035 1.2E-06 50.4 5.0 33 19-51 3-35 (335)
376 1f0y_A HCDH, L-3-hydroxyacyl-C 94.4 0.031 1.1E-06 49.9 4.3 34 19-52 15-48 (302)
377 2g1u_A Hypothetical protein TM 94.4 0.032 1.1E-06 44.3 3.8 37 173-209 16-52 (155)
378 3oz2_A Digeranylgeranylglycero 94.3 0.023 8E-07 52.5 3.3 32 178-209 6-37 (397)
379 3ihm_A Styrene monooxygenase A 94.2 0.022 7.6E-07 53.7 3.0 34 176-209 22-55 (430)
380 3doj_A AT3G25530, dehydrogenas 94.2 0.035 1.2E-06 49.8 4.2 38 16-53 18-55 (310)
381 3p2y_A Alanine dehydrogenase/p 94.2 0.03 1E-06 51.3 3.6 34 19-52 184-217 (381)
382 3gpi_A NAD-dependent epimerase 94.1 0.056 1.9E-06 47.6 5.3 35 18-52 2-36 (286)
383 2a9f_A Putative malic enzyme ( 94.1 0.034 1.2E-06 50.8 3.8 34 19-52 188-222 (398)
384 3k96_A Glycerol-3-phosphate de 94.1 0.047 1.6E-06 49.9 4.8 34 19-52 29-62 (356)
385 2hjr_A Malate dehydrogenase; m 94.0 0.045 1.5E-06 49.5 4.5 33 20-52 15-48 (328)
386 2ew2_A 2-dehydropantoate 2-red 94.0 0.039 1.3E-06 49.4 4.1 33 20-52 4-36 (316)
387 3eag_A UDP-N-acetylmuramate:L- 94.0 0.043 1.5E-06 49.6 4.3 34 19-52 4-38 (326)
388 4huj_A Uncharacterized protein 94.0 0.031 1E-06 47.4 3.1 36 17-52 21-57 (220)
389 1id1_A Putative potassium chan 93.8 0.053 1.8E-06 42.8 4.1 35 175-209 2-36 (153)
390 3eag_A UDP-N-acetylmuramate:L- 93.8 0.086 2.9E-06 47.6 6.0 34 176-209 4-38 (326)
391 1pjq_A CYSG, siroheme synthase 93.8 0.054 1.8E-06 51.4 4.7 35 174-208 10-44 (457)
392 1kyq_A Met8P, siroheme biosynt 93.6 0.051 1.7E-06 47.5 3.9 36 174-209 11-46 (274)
393 3i83_A 2-dehydropantoate 2-red 93.6 0.053 1.8E-06 48.8 4.2 32 21-52 4-35 (320)
394 1evy_A Glycerol-3-phosphate de 93.6 0.028 9.7E-07 51.7 2.4 33 20-52 16-48 (366)
395 2raf_A Putative dinucleotide-b 93.6 0.063 2.2E-06 45.0 4.3 35 19-53 19-53 (209)
396 3i83_A 2-dehydropantoate 2-red 93.6 0.081 2.8E-06 47.6 5.4 33 177-209 3-35 (320)
397 3oj0_A Glutr, glutamyl-tRNA re 93.6 0.024 8.4E-07 44.3 1.6 34 19-52 21-54 (144)
398 3g5s_A Methylenetetrahydrofola 93.5 0.04 1.4E-06 50.7 3.2 33 177-209 2-34 (443)
399 3hn2_A 2-dehydropantoate 2-red 93.5 0.058 2E-06 48.4 4.3 33 20-52 3-35 (312)
400 1vl6_A Malate oxidoreductase; 93.5 0.05 1.7E-06 49.7 3.8 33 19-51 192-225 (388)
401 1x13_A NAD(P) transhydrogenase 93.5 0.05 1.7E-06 50.7 3.9 34 19-52 172-205 (401)
402 2oln_A NIKD protein; flavoprot 93.5 0.047 1.6E-06 50.7 3.7 33 177-209 5-37 (397)
403 3hwr_A 2-dehydropantoate 2-red 93.4 0.09 3.1E-06 47.3 5.3 35 174-209 17-51 (318)
404 3fi9_A Malate dehydrogenase; s 93.4 0.088 3E-06 47.7 5.2 34 19-52 8-44 (343)
405 1bg6_A N-(1-D-carboxylethyl)-L 93.3 0.061 2.1E-06 49.2 4.1 33 20-52 5-37 (359)
406 1l7d_A Nicotinamide nucleotide 93.3 0.061 2.1E-06 49.8 4.2 34 19-52 172-205 (384)
407 1lld_A L-lactate dehydrogenase 93.3 0.064 2.2E-06 48.3 4.2 33 20-52 8-42 (319)
408 3pdu_A 3-hydroxyisobutyrate de 93.2 0.061 2.1E-06 47.6 3.9 34 20-53 2-35 (287)
409 3dme_A Conserved exported prot 93.2 0.048 1.6E-06 49.8 3.3 33 177-209 5-37 (369)
410 1pjc_A Protein (L-alanine dehy 93.2 0.069 2.4E-06 49.0 4.3 34 19-52 167-200 (361)
411 3hn2_A 2-dehydropantoate 2-red 93.1 0.1 3.6E-06 46.7 5.3 33 177-209 3-35 (312)
412 3nrn_A Uncharacterized protein 93.1 0.048 1.6E-06 51.1 3.2 33 177-209 1-33 (421)
413 1pzg_A LDH, lactate dehydrogen 93.1 0.081 2.8E-06 47.9 4.6 32 21-52 11-43 (331)
414 3gvi_A Malate dehydrogenase; N 93.1 0.08 2.7E-06 47.6 4.5 36 17-52 5-41 (324)
415 2pv7_A T-protein [includes: ch 93.1 0.096 3.3E-06 46.6 5.0 34 19-52 21-55 (298)
416 3k6j_A Protein F01G10.3, confi 93.1 0.072 2.5E-06 50.2 4.3 36 18-53 53-88 (460)
417 3mog_A Probable 3-hydroxybutyr 93.0 0.091 3.1E-06 50.1 5.0 34 19-52 5-38 (483)
418 1jw9_B Molybdopterin biosynthe 93.0 0.066 2.3E-06 46.3 3.7 34 19-52 31-65 (249)
419 1zcj_A Peroxisomal bifunctiona 93.0 0.068 2.3E-06 50.8 4.0 36 17-52 35-70 (463)
420 2gf3_A MSOX, monomeric sarcosi 93.0 0.054 1.8E-06 50.0 3.3 33 177-209 4-36 (389)
421 2uzz_A N-methyl-L-tryptophan o 93.0 0.042 1.4E-06 50.5 2.5 33 177-209 3-35 (372)
422 1ks9_A KPA reductase;, 2-dehyd 92.9 0.08 2.7E-06 46.7 4.3 33 21-53 2-34 (291)
423 3vtf_A UDP-glucose 6-dehydroge 92.9 0.074 2.5E-06 49.9 4.1 37 16-52 18-54 (444)
424 3g17_A Similar to 2-dehydropan 92.9 0.087 3E-06 46.8 4.4 33 20-52 3-35 (294)
425 3orq_A N5-carboxyaminoimidazol 92.9 0.11 3.7E-06 48.0 5.2 38 17-54 10-47 (377)
426 2vns_A Metalloreductase steap3 92.9 0.12 4.1E-06 43.5 5.0 34 19-52 28-61 (215)
427 1c0p_A D-amino acid oxidase; a 92.9 0.064 2.2E-06 49.1 3.6 34 176-209 6-39 (363)
428 3qha_A Putative oxidoreductase 92.9 0.077 2.6E-06 47.2 4.0 34 20-53 16-49 (296)
429 3ka7_A Oxidoreductase; structu 92.8 0.053 1.8E-06 50.8 3.0 33 177-209 1-33 (425)
430 3l9w_A Glutathione-regulated p 92.7 0.11 3.7E-06 48.6 4.9 33 20-52 5-37 (413)
431 3l6d_A Putative oxidoreductase 92.7 0.13 4.4E-06 45.9 5.3 34 19-52 9-42 (306)
432 3tl2_A Malate dehydrogenase; c 92.7 0.092 3.1E-06 47.0 4.2 33 19-51 8-41 (315)
433 3p7m_A Malate dehydrogenase; p 92.7 0.1 3.5E-06 46.9 4.5 35 18-52 4-39 (321)
434 3qsg_A NAD-binding phosphogluc 92.5 0.08 2.8E-06 47.5 3.7 33 19-51 24-57 (312)
435 3c4a_A Probable tryptophan hyd 92.5 0.06 2.1E-06 49.7 2.9 33 177-209 1-35 (381)
436 3fwz_A Inner membrane protein 92.5 0.1 3.5E-06 40.5 3.8 35 175-209 6-40 (140)
437 3dtt_A NADP oxidoreductase; st 92.5 0.11 3.8E-06 44.7 4.4 34 19-52 19-52 (245)
438 2iid_A L-amino-acid oxidase; f 92.5 0.06 2.1E-06 51.7 3.0 35 175-209 32-66 (498)
439 3c96_A Flavin-containing monoo 92.5 0.078 2.7E-06 49.5 3.7 33 177-209 5-38 (410)
440 2eez_A Alanine dehydrogenase; 92.4 0.1 3.5E-06 48.0 4.3 34 19-52 166-199 (369)
441 3k7m_X 6-hydroxy-L-nicotine ox 92.4 0.066 2.3E-06 50.3 3.0 32 178-209 3-34 (431)
442 2rcy_A Pyrroline carboxylate r 92.3 0.13 4.3E-06 44.8 4.6 35 19-53 4-42 (262)
443 3tri_A Pyrroline-5-carboxylate 92.3 0.14 4.9E-06 45.0 5.0 34 19-52 3-39 (280)
444 3nyc_A D-arginine dehydrogenas 92.3 0.07 2.4E-06 49.0 3.0 34 175-209 8-41 (381)
445 1t2d_A LDH-P, L-lactate dehydr 92.2 0.12 4.3E-06 46.4 4.5 33 20-52 5-38 (322)
446 2vhw_A Alanine dehydrogenase; 92.2 0.11 3.7E-06 47.9 4.3 34 19-52 168-201 (377)
447 1zej_A HBD-9, 3-hydroxyacyl-CO 92.2 0.1 3.5E-06 46.2 3.8 33 19-52 12-44 (293)
448 4dll_A 2-hydroxy-3-oxopropiona 92.2 0.1 3.4E-06 47.0 3.9 34 19-52 31-64 (320)
449 3pid_A UDP-glucose 6-dehydroge 92.2 0.095 3.2E-06 49.1 3.8 35 17-52 34-68 (432)
450 2y0c_A BCEC, UDP-glucose dehyd 92.2 0.098 3.3E-06 49.9 3.9 33 20-52 9-41 (478)
451 2h78_A Hibadh, 3-hydroxyisobut 92.2 0.095 3.2E-06 46.7 3.7 34 19-52 3-36 (302)
452 3q2o_A Phosphoribosylaminoimid 92.1 0.16 5.4E-06 47.1 5.3 36 19-54 14-49 (389)
453 1pjq_A CYSG, siroheme synthase 92.1 0.1 3.5E-06 49.5 4.0 34 19-52 12-45 (457)
454 4id9_A Short-chain dehydrogena 92.1 0.15 5.1E-06 46.2 5.1 36 18-53 18-54 (347)
455 2v6b_A L-LDH, L-lactate dehydr 92.1 0.11 3.9E-06 46.3 4.1 32 21-52 2-35 (304)
456 4gde_A UDP-galactopyranose mut 92.1 0.08 2.7E-06 50.9 3.3 33 177-209 11-44 (513)
457 2o3j_A UDP-glucose 6-dehydroge 92.0 0.092 3.1E-06 50.2 3.6 34 19-52 9-44 (481)
458 3llv_A Exopolyphosphatase-rela 92.0 0.084 2.9E-06 40.9 2.8 34 176-209 6-39 (141)
459 3dje_A Fructosyl amine: oxygen 92.0 0.089 3E-06 49.6 3.5 34 176-209 6-40 (438)
460 3nks_A Protoporphyrinogen oxid 92.0 0.079 2.7E-06 50.5 3.2 33 177-209 3-37 (477)
461 3phh_A Shikimate dehydrogenase 92.0 0.14 4.7E-06 44.7 4.4 34 19-52 118-151 (269)
462 1hdo_A Biliverdin IX beta redu 92.0 0.14 4.8E-06 42.3 4.4 33 20-52 4-37 (206)
463 3g3e_A D-amino-acid oxidase; F 92.0 0.078 2.7E-06 48.3 3.0 32 178-209 2-39 (351)
464 2ewd_A Lactate dehydrogenase,; 92.0 0.11 3.8E-06 46.7 3.9 33 20-52 5-38 (317)
465 2e1m_A L-glutamate oxidase; L- 91.9 0.092 3.1E-06 48.3 3.3 34 175-208 43-76 (376)
466 3gg2_A Sugar dehydrogenase, UD 91.9 0.11 3.9E-06 49.0 4.1 32 21-52 4-35 (450)
467 1lss_A TRK system potassium up 91.9 0.095 3.2E-06 40.3 3.0 34 176-209 4-37 (140)
468 2zyd_A 6-phosphogluconate dehy 91.9 0.14 4.7E-06 48.9 4.6 37 16-52 12-48 (480)
469 3c24_A Putative oxidoreductase 91.9 0.15 5E-06 45.0 4.5 33 20-52 12-45 (286)
470 3ius_A Uncharacterized conserv 91.9 0.12 4E-06 45.5 3.9 33 20-52 6-38 (286)
471 3ic5_A Putative saccharopine d 91.9 0.08 2.7E-06 39.3 2.4 35 175-209 4-39 (118)
472 3pef_A 6-phosphogluconate dehy 91.7 0.12 4.2E-06 45.6 3.9 33 21-53 3-35 (287)
473 2uyy_A N-PAC protein; long-cha 91.7 0.17 5.9E-06 45.3 4.9 34 19-52 30-63 (316)
474 1nyt_A Shikimate 5-dehydrogena 91.7 0.14 4.6E-06 44.9 4.1 34 19-52 119-152 (271)
475 3g0o_A 3-hydroxyisobutyrate de 91.7 0.14 4.6E-06 45.7 4.1 33 20-52 8-40 (303)
476 2b9w_A Putative aminooxidase; 91.7 0.098 3.3E-06 49.0 3.4 35 175-209 5-40 (424)
477 4a7p_A UDP-glucose dehydrogena 91.7 0.13 4.5E-06 48.4 4.2 35 19-53 8-42 (446)
478 3slg_A PBGP3 protein; structur 91.7 0.13 4.6E-06 47.1 4.2 36 17-52 22-59 (372)
479 4g65_A TRK system potassium up 91.7 0.07 2.4E-06 50.7 2.3 32 21-52 5-36 (461)
480 3ax6_A Phosphoribosylaminoimid 91.7 0.17 5.9E-06 46.6 5.0 35 20-54 2-36 (380)
481 3ggo_A Prephenate dehydrogenas 91.7 0.16 5.4E-06 45.6 4.5 34 19-52 33-68 (314)
482 4e21_A 6-phosphogluconate dehy 91.6 0.14 4.8E-06 46.8 4.1 34 19-52 22-55 (358)
483 2we8_A Xanthine dehydrogenase; 91.6 0.2 6.9E-06 46.1 5.2 36 19-54 204-239 (386)
484 2cvz_A Dehydrogenase, 3-hydrox 91.5 0.14 4.8E-06 45.1 4.0 32 20-52 2-33 (289)
485 2g5c_A Prephenate dehydrogenas 91.5 0.15 5.2E-06 44.8 4.2 33 20-52 2-36 (281)
486 4gwg_A 6-phosphogluconate dehy 91.5 0.19 6.6E-06 47.8 5.1 34 19-52 4-37 (484)
487 1hyh_A L-hicdh, L-2-hydroxyiso 91.4 0.13 4.5E-06 46.0 3.8 33 20-52 2-36 (309)
488 2jae_A L-amino acid oxidase; o 91.4 0.11 3.8E-06 49.7 3.5 35 175-209 10-44 (489)
489 3qvo_A NMRA family protein; st 91.4 0.1 3.4E-06 44.6 2.8 38 15-52 19-58 (236)
490 2bcg_G Secretory pathway GDP d 91.3 0.098 3.3E-06 49.6 2.9 33 177-209 12-44 (453)
491 2bi7_A UDP-galactopyranose mut 91.3 0.13 4.5E-06 47.5 3.7 33 177-209 4-36 (384)
492 3c4n_A Uncharacterized protein 91.3 0.1 3.5E-06 48.7 2.9 33 177-209 37-71 (405)
493 2hmt_A YUAA protein; RCK, KTN, 91.2 0.15 5.3E-06 39.3 3.6 35 175-209 5-39 (144)
494 2qcu_A Aerobic glycerol-3-phos 91.2 0.1 3.4E-06 50.3 2.9 33 177-209 4-36 (501)
495 3r6d_A NAD-dependent epimerase 91.2 0.21 7.2E-06 41.9 4.6 34 19-52 5-40 (221)
496 3d4o_A Dipicolinate synthase s 91.2 0.18 6E-06 44.7 4.3 34 19-52 155-188 (293)
497 3hwr_A 2-dehydropantoate 2-red 91.2 0.16 5.6E-06 45.6 4.1 33 19-52 19-51 (318)
498 1ur5_A Malate dehydrogenase; o 91.1 0.18 6E-06 45.1 4.3 33 20-52 3-36 (309)
499 2aef_A Calcium-gated potassium 91.1 0.08 2.7E-06 45.2 1.9 32 20-52 10-41 (234)
500 3ond_A Adenosylhomocysteinase; 91.1 0.16 5.5E-06 48.0 4.1 34 19-52 265-298 (488)
No 1
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.3e-40 Score=312.10 Aligned_cols=331 Identities=21% Similarity=0.334 Sum_probs=248.6
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCC------
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPH------ 91 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 91 (408)
..+||+|||||++|+++|..|+++|++|+|||+.+.+||.|.. .|+......+.....++.+..+.....+..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH-AWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLA 80 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG-SCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC-CCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHH
Confidence 3568999999999999999999999999999999999999975 377777666666666666554433222222
Q ss_pred -------ccCccccccceeEEEEEcCCCCcEE-EEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeee
Q 035488 92 -------QFDINPRFNETVQSAKYDETFGFWR-IKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVM 163 (408)
Q Consensus 92 -------~~~~~~~~~~~V~~i~~~~~~~~~~-V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~ 163 (408)
+++++++++++|++++..+ +.|. |++.+ .++.||+||+|||.++.|..|.+||...+.+..+
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v~~~~--------g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~ 150 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRVSHFG--ERLRVVARDG--------RQWLARAVISATGTWGEAYTPEYQGLESFAGIQL 150 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEEEEET--TEEEEEETTS--------CEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEE
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEECC--CcEEEEEeCC--------CEEEeCEEEECCCCCCCCCCCCCCCccccCCcEE
Confidence 6688889999999999887 6777 76554 4799999999999888888899999888777889
Q ss_pred eccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHH
Q 035488 164 HAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILL 243 (408)
Q Consensus 164 ~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (408)
+.+.+.+...+.+++|+|||+|.+|+|+|..|++.+ +|++++|++.+++|....+. .+...+...+ ..
T Consensus 151 ~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~---~~~~~~~~~~--------~~ 218 (357)
T 4a9w_A 151 HSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGR---VLFERATERW--------KA 218 (357)
T ss_dssp EGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTH---HHHTC---------------
T ss_pred EeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCc---cHHHHHHHHH--------hc
Confidence 998888887788999999999999999999999998 59999998656766654311 1111111111 00
Q ss_pred HHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecCccEEeCCeEEEecCcEEccCEEEEcCC
Q 035488 244 ILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPGIKKFSPGKVELVNGQVLEIDSVVLATG 323 (408)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~v~~~~g~~~~~D~vi~atG 323 (408)
. ....+ ..........+.+.....+.+..+.+.....+.+++..++.+.+|+++++|.||+|||
T Consensus 219 ~---------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~v~~~~~~~v~~~~g~~i~~D~vi~a~G 282 (357)
T 4a9w_A 219 Q---------QEGRE-------PDLPPGGFGDIVMVPPVLDARARGVLAAVPPPARFSPTGMQWADGTERAFDAVIWCTG 282 (357)
T ss_dssp -------------------------------CBCCCHHHHHHHHTTCCCEECCCSEEETTEEECTTSCEEECSEEEECCC
T ss_pred c---------ccccC-------CCcccccccCcccChhHHHHHhcCceEEecCcceEeCCeeEECCCCEecCCEEEECCC
Confidence 0 00000 0000001112334455556666666666666899999999999999999999999999
Q ss_pred CCCCCCCcccccccccCCCCCCCCCC-CCCCCCCceEEEe--ecccc----CccchhhHHHHHHHHHHHhhH
Q 035488 324 YRSNVPSWLKENEFFSENGIPKNPFP-NGWKGKTGLYAVG--FTKRG----LSGASLDAMSVALDIAKSWKE 388 (408)
Q Consensus 324 ~~~~~~~l~~~~~~~~~~g~~~~~~~-~~~t~~~~iya~G--d~~~~----~~~a~~~a~~~a~~i~~~~~~ 388 (408)
++|++ .+++..++.+++|++.+|.. +++|+.|+|||+| |++.. ...|..+|+.+|.+|.+.+++
T Consensus 283 ~~p~~-~~l~~~gl~~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 283 FRPAL-SHLKGLDLVTPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp BCCCC-GGGTTTTCBCTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred cCCCC-cccCcccccCCCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 99998 78888888788899999853 3789999999999 55542 237899999999999999987
No 2
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=3.5e-39 Score=311.73 Aligned_cols=294 Identities=20% Similarity=0.384 Sum_probs=224.4
Q ss_pred CCcEEECCChHHHHHHHHHHH---cCCC---EEEEecCCCCCCccCCCC---------------CCCeeeecCCccccCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKN---QGVP---FIILERANCIASLWQNRT---------------YDRLKLHLPKQFCQLP 78 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~---~g~~---v~lie~~~~~gg~w~~~~---------------~~~~~~~~~~~~~~~~ 78 (408)
+||+|||||++|+++|..|++ .|++ |+|||+.+.+||+|.... |..+..+.++..+.++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 589999999999999999999 9999 999999999999997532 3333333444433443
Q ss_pred CCCCCCCC----CCCC-------------CccCcc--ccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEE
Q 035488 79 NFPFPEDF----PRVP-------------HQFDIN--PRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVV 139 (408)
Q Consensus 79 ~~~~~~~~----~~~~-------------~~~~~~--~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vVi 139 (408)
+++++... ..+. .++++. ++++++|++++.....+.|+|++.+...++ ..++.||+||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~--~~~~~~d~VVv 160 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDT--IYSEEFDYVVC 160 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTE--EEEEEESEEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCc--eEEEEcCEEEE
Confidence 33322110 1111 255776 788999999998764348999987642221 15789999999
Q ss_pred eeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccC
Q 035488 140 ATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLG 219 (408)
Q Consensus 140 AtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~ 219 (408)
|||.++.|..|.+||.+.+.+.++|+.++.+...+.+++|+|||+|.+|+|+|..|++.|.+|+++.+++. +++..
T Consensus 161 AtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~-~~~~~--- 236 (464)
T 2xve_A 161 CTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA-PMGYK--- 236 (464)
T ss_dssp CCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC-CCCCC---
T ss_pred CCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC-CCCCC---
Confidence 99998899999999998887888999988887777899999999999999999999999999999998872 21100
Q ss_pred CchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecCccE
Q 035488 220 KSTFQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPGIKK 299 (408)
Q Consensus 220 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~ 299 (408)
...+|+++..|.+
T Consensus 237 -------------------------------------------------------------------~~~~V~~~~~V~~ 249 (464)
T 2xve_A 237 -------------------------------------------------------------------WPENWDERPNLVR 249 (464)
T ss_dssp -------------------------------------------------------------------CCTTEEECSCEEE
T ss_pred -------------------------------------------------------------------CCCceEEcCCeEE
Confidence 0136777766889
Q ss_pred EeCCeEEEecCcEEccCEEEEcCCCCCCCCCcccc-ccccc-CCCCCCCCC-CCCCCCCCceEEEeeccccCc--cchhh
Q 035488 300 FSPGKVELVNGQVLEIDSVVLATGYRSNVPSWLKE-NEFFS-ENGIPKNPF-PNGWKGKTGLYAVGFTKRGLS--GASLD 374 (408)
Q Consensus 300 ~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~l~~~-~~~~~-~~g~~~~~~-~~~~t~~~~iya~Gd~~~~~~--~a~~~ 374 (408)
+++++|.+.||+++++|.||+|||++|++ .++.+ .++.. ++|.+...+ ....|+.|+|||+||+..... .|..|
T Consensus 250 i~~~~V~~~dG~~i~~D~Vi~atG~~p~~-~~l~~~~gl~~~~~~~v~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~~q 328 (464)
T 2xve_A 250 VDTENAYFADGSSEKVDAIILCTGYIHHF-PFLNDDLRLVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQ 328 (464)
T ss_dssp ECSSEEEETTSCEEECSEEEECCCBCCCC-TTBCTTTCCCCCSSSCCSSEETTTEESSSTTEEECSCSCCSSCHHHHHHH
T ss_pred EeCCEEEECCCCEEeCCEEEECCCCCCCC-CCcCcccccccCCCcccccccceEecCCCCCEEEEeCcccccchHHHHHH
Confidence 98889999999999999999999999998 55554 45543 333553222 234589999999999876443 78899
Q ss_pred HHHHHHHHHHHhh
Q 035488 375 AMSVALDIAKSWK 387 (408)
Q Consensus 375 a~~~a~~i~~~~~ 387 (408)
|+++|.+|.+...
T Consensus 329 a~~~a~~l~G~~~ 341 (464)
T 2xve_A 329 AWYARDVIMGRLP 341 (464)
T ss_dssp HHHHHHHHTTSSC
T ss_pred HHHHHHHHcCCCC
Confidence 9999999988653
No 3
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=1.9e-39 Score=318.05 Aligned_cols=355 Identities=20% Similarity=0.284 Sum_probs=255.7
Q ss_pred cCCcEEECCChHHHHHHHHHH-HcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCC-------CCCCCCC---
Q 035488 19 VNGPVIVGAGPSGLAVAAGLK-NQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNF-------PFPEDFP--- 87 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~-~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~--- 87 (408)
.+||+|||||++|+++|..|+ +.|++|+|||+++.+||+|....|++...+.+...+.++.. .+...+.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 468999999999999999999 89999999999999999999888999988887776665532 1111110
Q ss_pred -------CCCCccCc--cccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCc
Q 035488 88 -------RVPHQFDI--NPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHF 158 (408)
Q Consensus 88 -------~~~~~~~~--~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~ 158 (408)
.+.+++++ .++++++|++++.++..+.|+|++.++ .++.||+||+|||.++.|..|.+||.+.+
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G-------~~i~ad~lV~AtG~~s~p~~p~ipG~~~f 160 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG-------EVYRAKYVVNAVGLLSAINFPNLPGLDTF 160 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS-------CEEEEEEEEECCCSCCSBCCCCCTTGGGC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC-------CEEEeCEEEECCcccccCCCCCCCCcccc
Confidence 01125666 688999999999887546888988765 57999999999999889999999999988
Q ss_pred ceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchH--
Q 035488 159 EGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLW-- 236 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~-- 236 (408)
.+..+|+..+.......+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+++|......+.... ..+...+|..
T Consensus 161 ~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~-~~l~~~~~~~~~ 239 (540)
T 3gwf_A 161 EGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQI-AEIKADYDRIWE 239 (540)
T ss_dssp CSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHH-HHHHHTHHHHHH
T ss_pred CCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHH-HHHHhccHHHHH
Confidence 8899999988887778899999999999999999999999999999999998888876653322211 1111111100
Q ss_pred ------------------------HHHHHH---------------------------HHHHHHHhhhhhhcCCCCC----
Q 035488 237 ------------------------LVDKIL---------------------------LILARLILGNVEKYGLKRP---- 261 (408)
Q Consensus 237 ------------------------~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~---- 261 (408)
.+.... ......+...+. ..+..+
T Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~dp~~~~ 318 (540)
T 3gwf_A 240 RAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVA-EIIEDPETAR 318 (540)
T ss_dssp HHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHH-HHCCSHHHHH
T ss_pred HHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHH-HHcCCHHHHH
Confidence 000000 000000000000 011111
Q ss_pred CCCCcccccCCCCCcccChhhhhhhccCCeEEe---cC-ccEEeCCeEEEecCcEEccCEEEEcCCCCCCCCCccccccc
Q 035488 262 PTGPIELKNNEGKTPVLDIGALQKIRSGDIKVV---PG-IKKFSPGKVELVNGQVLEIDSVVLATGYRSNVPSWLKENEF 337 (408)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~-i~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~l~~~~~~ 337 (408)
++.+. ...++++.+...+++.+.+.+|+++ .. |+++++++|.+.||+++++|+||+|||+++++ .++....+
T Consensus 319 ~l~P~---~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv~~~dG~~~~~DvIV~ATGf~~~~-~~~~~~~i 394 (540)
T 3gwf_A 319 KLMPK---GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVD-GNYRRIEI 394 (540)
T ss_dssp HHCCC---SCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEEEETTCCEEECSEEEECCCBSCSS-HHHHTSEE
T ss_pred hCCCC---CCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeEEcCCCCEEECCEEEECCccCccc-cCcCcceE
Confidence 12221 5677889999999999999999999 44 99999999999999999999999999999986 34444333
Q ss_pred ccCCC---------CCCCCCCCCCCCCCceEEE-eecccc---CccchhhHHHHHHHHHHHh
Q 035488 338 FSENG---------IPKNPFPNGWKGKTGLYAV-GFTKRG---LSGASLDAMSVALDIAKSW 386 (408)
Q Consensus 338 ~~~~g---------~~~~~~~~~~t~~~~iya~-Gd~~~~---~~~a~~~a~~~a~~i~~~~ 386 (408)
...+| .+........++.||+|++ |+.+.. +..+..|++.+++.|....
T Consensus 395 ~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~~~~ 456 (540)
T 3gwf_A 395 RGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIGYAE 456 (540)
T ss_dssp ECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 22222 2222222345689999999 876542 2266778888777775543
No 4
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=3.9e-38 Score=309.02 Aligned_cols=356 Identities=18% Similarity=0.297 Sum_probs=245.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCC-------CCCCCCC---
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFP-------FPEDFPR--- 88 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~--- 88 (408)
.+||+|||||++|+++|..|++.|++|+|||+++.+||+|..+.|++...+.+...+.++..+ +...+..
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~e 88 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPE 88 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHH
Confidence 468999999999999999999999999999999999999998889998887776555443211 1111110
Q ss_pred -------CCCccCc--cccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcc
Q 035488 89 -------VPHQFDI--NPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFE 159 (408)
Q Consensus 89 -------~~~~~~~--~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~ 159 (408)
..+++++ .++++++|++++.++..+.|+|++.++ .+++||+||+|||.++.|..|.+||.+.+.
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G-------~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~ 161 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE-------EVVTCRFLISATGPLSASRMPDIKGIDSFK 161 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT-------EEEEEEEEEECCCSCBC---CCCTTGGGCC
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC-------CEEEeCEEEECcCCCCCCcCCCCCCccccC
Confidence 0114555 678899999999876556888998765 689999999999988899999999999888
Q ss_pred eeeeeccCCCCC-------CCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhh
Q 035488 160 GNVMHAGDYKSG-------ASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKY 232 (408)
Q Consensus 160 ~~~~~~~~~~~~-------~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 232 (408)
+..+|+..+... ....+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+++|..+...+.... ..+...
T Consensus 162 g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~-~~l~~~ 240 (545)
T 3uox_A 162 GESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKM-DSLRNR 240 (545)
T ss_dssp SEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHH-HHHHHT
T ss_pred CCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHH-HHHHhh
Confidence 889999888765 566899999999999999999999999999999999998888876553222211 111111
Q ss_pred cchH--------------------------HHHHH--------------------------HHHHHHHHhhhhhhcCCCC
Q 035488 233 FPLW--------------------------LVDKI--------------------------LLILARLILGNVEKYGLKR 260 (408)
Q Consensus 233 l~~~--------------------------~~~~~--------------------------~~~~~~~~~~~~~~~~~~~ 260 (408)
+|.. .+..+ .......+...+ +..+..
T Consensus 241 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~d 319 (545)
T 3uox_A 241 YPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKI-RQRVKD 319 (545)
T ss_dssp HHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHH-HHHCSC
T ss_pred hHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHH-HHHcCC
Confidence 1100 00000 000000000000 001111
Q ss_pred C----CCCCcccccCCCCCcccChhhhhhhccCCeEEe---cC-ccEEeCCeEEEecCcEEccCEEEEcCCCCCCCCCcc
Q 035488 261 P----PTGPIELKNNEGKTPVLDIGALQKIRSGDIKVV---PG-IKKFSPGKVELVNGQVLEIDSVVLATGYRSNVPSWL 332 (408)
Q Consensus 261 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~-i~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~l~ 332 (408)
+ ++.+. .....++++.+...+++.+.+.+|+++ .. |+++++++|.+.+| ++++|.||+|||+++.+ .++
T Consensus 320 ~~~~~~l~P~-~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~gv~~~dG-~~~~D~IV~ATGf~~~~-~~~ 396 (545)
T 3uox_A 320 PVVAEKLIPK-DHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYATGFDAVT-GSL 396 (545)
T ss_dssp HHHHHHTSCS-SSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCCBSSS-CSC
T ss_pred HHHHHhCCCC-CCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCeEEeCCC-eeecCEEEECCcccccc-ccC
Confidence 1 11110 123457788889999999999999999 34 99999999999999 99999999999999876 444
Q ss_pred cccccccCCCCCC---------CCCCCCCCCCCceEEEe-eccc-c----CccchhhHHHHHHHHHHHh
Q 035488 333 KENEFFSENGIPK---------NPFPNGWKGKTGLYAVG-FTKR-G----LSGASLDAMSVALDIAKSW 386 (408)
Q Consensus 333 ~~~~~~~~~g~~~---------~~~~~~~t~~~~iya~G-d~~~-~----~~~a~~~a~~~a~~i~~~~ 386 (408)
....+...+|..+ .-......+.||+|++. ..++ + +..+..|++.+++.|....
T Consensus 397 ~~~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~~~~ 465 (545)
T 3uox_A 397 DRIDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYMK 465 (545)
T ss_dssp TTSEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333222 11123446899999984 3322 1 1256677888777775443
No 5
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=4.4e-37 Score=301.81 Aligned_cols=355 Identities=23% Similarity=0.324 Sum_probs=249.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCC-------CCCCCCCC---
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNF-------PFPEDFPR--- 88 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~--- 88 (408)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||+|..+.|++...+.+...+.++.. .+...+..
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 46899999999999999999999999999999999999999888999988888777766532 11111110
Q ss_pred -------CCCccCc--cccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcc
Q 035488 89 -------VPHQFDI--NPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFE 159 (408)
Q Consensus 89 -------~~~~~~~--~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~ 159 (408)
..+++++ .++++++|++++.++..+.|+|++.++ .++.||+||+|||..+.|..|.+||.+.+.
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G-------~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~ 173 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG-------DEVSARFLVVAAGPLSNANTPAFDGLDRFT 173 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC-------CEEEEEEEEECCCSEEECCCCCCTTGGGCC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC-------CEEEeCEEEECcCCCCCCCCCCCCCcccCC
Confidence 1115666 678999999999887556888988764 579999999999988899999999999888
Q ss_pred eeeeeccCCC-CCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHH-
Q 035488 160 GNVMHAGDYK-SGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWL- 237 (408)
Q Consensus 160 ~~~~~~~~~~-~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~- 237 (408)
+..+|+..+. +.....+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+++|..+...+.... ..+...+|...
T Consensus 174 g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~-~~l~~~~~~~~~ 252 (549)
T 4ap3_A 174 GDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATR-AEQKANYAERRR 252 (549)
T ss_dssp SEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHH-HHHHHTHHHHHH
T ss_pred CceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHH-HHHHhccHHHHH
Confidence 8999998887 56677899999999999999999999999999999999998888877653222111 11111111100
Q ss_pred -------------------------HHHHH-------------------------HHHHHHHhhhhhhcCCCCC----CC
Q 035488 238 -------------------------VDKIL-------------------------LILARLILGNVEKYGLKRP----PT 263 (408)
Q Consensus 238 -------------------------~~~~~-------------------------~~~~~~~~~~~~~~~~~~~----~~ 263 (408)
+..+. ......+...+.+ .+..+ ++
T Consensus 253 ~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~d~~~~~~l 331 (549)
T 4ap3_A 253 LSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRA-VVDDPAVAELL 331 (549)
T ss_dssp HHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHHH-HCSCHHHHHHH
T ss_pred HHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHHH-HcCCHHHHHhC
Confidence 00000 0000000000000 01111 01
Q ss_pred CCcccccCCCCCcccChhhhhhhccCCeEEe---cC-ccEEeCCeEEEecCcEEccCEEEEcCCCCCCCCCccccccccc
Q 035488 264 GPIELKNNEGKTPVLDIGALQKIRSGDIKVV---PG-IKKFSPGKVELVNGQVLEIDSVVLATGYRSNVPSWLKENEFFS 339 (408)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~-i~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~l~~~~~~~~ 339 (408)
.+. .....++++.+...+++.+.+.+|+++ .. |+++++++|.+.+| ++++|+||+|||++++. .++....+..
T Consensus 332 ~P~-~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~~~dG-~~~~D~iI~ATGf~~~~-~~~~~~~i~g 408 (549)
T 4ap3_A 332 TPK-DHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVTTGA-HYDLDMIVLATGFDAMT-GSLDKLEIVG 408 (549)
T ss_dssp SCS-SCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCEEESS-TTGGGSEEEC
T ss_pred CCC-CCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEEeCCC-ceecCEEEECCcccccc-cccCceeEEC
Confidence 111 023466788889999999999999999 55 99999999999999 99999999999999986 3444443333
Q ss_pred CCCC---------CCCCCCCCCCCCCceEEE-eecccc-----CccchhhHHHHHHHHHHH
Q 035488 340 ENGI---------PKNPFPNGWKGKTGLYAV-GFTKRG-----LSGASLDAMSVALDIAKS 385 (408)
Q Consensus 340 ~~g~---------~~~~~~~~~t~~~~iya~-Gd~~~~-----~~~a~~~a~~~a~~i~~~ 385 (408)
.+|. +..-......+.||+|.+ |..++. +..+..|++.+++.|...
T Consensus 409 ~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~~~ 469 (549)
T 4ap3_A 409 RGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAYL 469 (549)
T ss_dssp GGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHHHH
Confidence 3332 222212334689999998 544321 225667777777766544
No 6
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=3.7e-37 Score=303.42 Aligned_cols=357 Identities=22% Similarity=0.334 Sum_probs=250.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCC-------CCCCCCCC---
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNF-------PFPEDFPR--- 88 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~--- 88 (408)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||+|....|++..++.+...+.+++. .+...+..
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 95 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPE 95 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHH
Confidence 57999999999999999999999999999999999999998878888877766655544421 11111110
Q ss_pred ---C----CCccC--ccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcc
Q 035488 89 ---V----PHQFD--INPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFE 159 (408)
Q Consensus 89 ---~----~~~~~--~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~ 159 (408)
| .++++ ..++++++|++++.+++.+.|+|++.++ .+++||+||+|||.++.|..|.+||.+.+.
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G-------~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~ 168 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG-------DRIRARYLIMASGQLSVPQLPNFPGLKDFA 168 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC-------CEEEEEEEEECCCSCCCCCCCCCTTGGGCC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC-------CEEEeCEEEECcCCCCCCCCCCCCCcccCC
Confidence 1 11344 4678899999999876446788888654 479999999999998899999999998888
Q ss_pred eeeeeccCCC-CCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchH--
Q 035488 160 GNVMHAGDYK-SGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLW-- 236 (408)
Q Consensus 160 ~~~~~~~~~~-~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~-- 236 (408)
+.++|+..+. +...+.+|+|+|||+|.+|+|+|..++..+.+|+++.|++.+++|........ +....+...+|..
T Consensus 169 G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~-~~~~~~~~~~p~l~~ 247 (542)
T 1w4x_A 169 GNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDP-EFLADLKKRYAEFRE 247 (542)
T ss_dssp SEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCH-HHHHHHHTTHHHHHH
T ss_pred CceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCH-HHHHHHHhhCHHHHH
Confidence 8899998877 44566899999999999999999999999999999999997777765432211 1111111111100
Q ss_pred ------------------------HHHHHHHH-------------------------HHHHHhhhhhhcCCCCC----CC
Q 035488 237 ------------------------LVDKILLI-------------------------LARLILGNVEKYGLKRP----PT 263 (408)
Q Consensus 237 ------------------------~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~----~~ 263 (408)
.+..+... +...+...+. ..+..+ ++
T Consensus 248 ~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 326 (542)
T 1w4x_A 248 ESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIR-NTVRDPEVAERL 326 (542)
T ss_dssp HHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHH-HHCSSHHHHHHH
T ss_pred HHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHH-HHcCCHHHHHhc
Confidence 00000000 0000000000 000000 00
Q ss_pred CCcccccCCCCCcccChhhhhhhccCCeEEe---cC-ccEEeCCeEEEecCcEEccCEEEEcCCCCCCCCCccccccccc
Q 035488 264 GPIELKNNEGKTPVLDIGALQKIRSGDIKVV---PG-IKKFSPGKVELVNGQVLEIDSVVLATGYRSNVPSWLKENEFFS 339 (408)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~-i~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~l~~~~~~~~ 339 (408)
.+. .....++++.+.+.+++.+.+++|+++ .. |+++++++|.+.| +++++|.||+|||+++++ .++...++..
T Consensus 327 ~P~-~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~~d-~~~~~D~ii~atG~~~~~-~~~~~~~i~g 403 (542)
T 1w4x_A 327 VPK-GYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSE-REYELDSLVLATGFDALT-GALFKIDIRG 403 (542)
T ss_dssp SCC-SSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEESS-CEEECSEEEECCCCCCTT-HHHHTSEEEC
T ss_pred CCC-CCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEeCC-eEEecCEEEEcCCccccc-cCcCceeeEC
Confidence 010 123567788999999999999999997 44 9999999999999 999999999999999976 4444444433
Q ss_pred CCCCCCCC---------CCCCCCCCCceEEE-eeccc--c---CccchhhHHHHHHHHHHHhh
Q 035488 340 ENGIPKNP---------FPNGWKGKTGLYAV-GFTKR--G---LSGASLDAMSVALDIAKSWK 387 (408)
Q Consensus 340 ~~g~~~~~---------~~~~~t~~~~iya~-Gd~~~--~---~~~a~~~a~~~a~~i~~~~~ 387 (408)
.+|..+.+ .....++.||+|++ |+.+. . +..+..|++.+++.|....+
T Consensus 404 ~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~~~~ 466 (542)
T 1w4x_A 404 VGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMFK 466 (542)
T ss_dssp GGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 33433221 11334688999998 98753 1 13678899999999887653
No 7
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=1.6e-36 Score=292.57 Aligned_cols=287 Identities=22% Similarity=0.335 Sum_probs=212.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCCccCCCCCCC-------------------------------
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV--PFIILERANCIASLWQNRTYDR------------------------------- 65 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~--~v~lie~~~~~gg~w~~~~~~~------------------------------- 65 (408)
.+||+|||||++|+++|..|++.|. +|+|||+.+.+||.|.......
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 5789999999999999999999999 9999999999999997542111
Q ss_pred --eeeecCCccccCCCCCCCCCCCCCCC-------------ccCccccccceeEEEEEcCCCCcEEEEEeecC-CC-Ccc
Q 035488 66 --LKLHLPKQFCQLPNFPFPEDFPRVPH-------------QFDINPRFNETVQSAKYDETFGFWRIKTISSS-DS-SFC 128 (408)
Q Consensus 66 --~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~-~~-~~~ 128 (408)
+..+.+.....+++.+++.....+.. +++..++++++|++++... +.|+|++.+.. +. .
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~--~~~~V~~~~~~~G~~~-- 161 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD--GSWVVTYKGTKAGSPI-- 161 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET--TEEEEEEEESSTTCCE--
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC--CeEEEEEeecCCCCee--
Confidence 11111111222333333322222221 4455678899999998876 67889887621 21 1
Q ss_pred eEEEEeCEEEEeeCCCCCCCCCCCCCCCCc----ceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCc-cE
Q 035488 129 EVEYICRWLVVATGENAEKIEPEFEGLQHF----EGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAK-PS 203 (408)
Q Consensus 129 ~~~i~ad~vViAtG~~~~~~~p~~~g~~~~----~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~-V~ 203 (408)
.++.||+||+|||.++.|.+|.+||.+.+ .+.++|+..+.+...+.+++|+|||+|.+|+|+|..|++.+.+ |+
T Consensus 162 -~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~ 240 (447)
T 2gv8_A 162 -SKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPIY 240 (447)
T ss_dssp -EEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEE
T ss_pred -EEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHhCCcEE
Confidence 37999999999998889999999997643 3568888888877777899999999999999999999999999 99
Q ss_pred EEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhh
Q 035488 204 MVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGAL 283 (408)
Q Consensus 204 ~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (408)
+++|++.+
T Consensus 241 l~~r~~~~------------------------------------------------------------------------ 248 (447)
T 2gv8_A 241 QSLLGGGD------------------------------------------------------------------------ 248 (447)
T ss_dssp EECTTCCS------------------------------------------------------------------------
T ss_pred EEeCCCCc------------------------------------------------------------------------
Confidence 99887721
Q ss_pred hhhccCCeEEecCccEEe--CCeEEEecCcE-EccCEEEEcCCCCCCCCCc-----cccc--ccccCCCCCCCCC-CC-C
Q 035488 284 QKIRSGDIKVVPGIKKFS--PGKVELVNGQV-LEIDSVVLATGYRSNVPSW-----LKEN--EFFSENGIPKNPF-PN-G 351 (408)
Q Consensus 284 ~~~~~~~i~~~~~i~~~~--~~~v~~~~g~~-~~~D~vi~atG~~~~~~~l-----~~~~--~~~~~~g~~~~~~-~~-~ 351 (408)
+...+|.+...|++++ +..|.+.||+. +++|.||+|||++|++ .| ++.. ++. .++...++. .. .
T Consensus 249 --l~~~~i~~~~~v~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~~~~-~~l~~~~l~~~~~~i~-~~~~~~~~~~~~v~ 324 (447)
T 2gv8_A 249 --IQNESLQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSV-PFPSLAKLKSPETKLI-DDGSHVHNVYQHIF 324 (447)
T ss_dssp --CBCSSEEEECCEEEEETTTTEEEETTTEEECCCSEEEECCCBCCCC-CCHHHHSCCSTTTCCC-SSSSSCCSEETTTE
T ss_pred --CCCCCeEEecCeEEEecCCCEEEECCCCEeccCCEEEECCCCCcCC-CCCcccccccccCcee-cCCCcccccccccc
Confidence 1234666666688884 45799999987 7999999999999998 56 5543 232 245444431 11 1
Q ss_pred CCCCCceEEEeeccccC--ccchhhHHHHHHHHHHHh
Q 035488 352 WKGKTGLYAVGFTKRGL--SGASLDAMSVALDIAKSW 386 (408)
Q Consensus 352 ~t~~~~iya~Gd~~~~~--~~a~~~a~~~a~~i~~~~ 386 (408)
.++.|++|++||+.... ..|..||+++|.+|.+.+
T Consensus 325 ~~~~p~l~~~G~~~~~~~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 325 YIPDPTLAFVGLALHVVPFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp ETTCTTEEESSCCBSSCHHHHHHHHHHHHHHHHTTSS
T ss_pred cCCCCcEEEEeccccccCchHHHHHHHHHHHHHcCCC
Confidence 27899999999987643 268899999999998865
No 8
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=4.6e-38 Score=291.88 Aligned_cols=289 Identities=18% Similarity=0.256 Sum_probs=218.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCC--CC----CCCCCCCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPF--PE----DFPRVPHQ 92 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~ 92 (408)
++||+|||||++|+++|..|++.|++|+|||+.+.+||.|... |+..... ..+.++. .. .+..+..+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 79 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSAL-YPEKYIY------DVAGFPKIRAQELINNLKEQMAK 79 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHH-CTTSEEC------CSTTCSSEEHHHHHHHHHHHHTT
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhc-CCCceEe------ccCCCCCCCHHHHHHHHHHHHHH
Confidence 5699999999999999999999999999999999999988532 2222211 1111110 00 01122235
Q ss_pred cCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCC-CCCCCCCCCCCCcceeeeeccCCCCC
Q 035488 93 FDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENA-EKIEPEFEGLQHFEGNVMHAGDYKSG 171 (408)
Q Consensus 93 ~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~-~~~~p~~~g~~~~~~~~~~~~~~~~~ 171 (408)
++++++++++|++++.... +.|.|++.+ .++.||+||+|||..+ .|..|.+||...+.+..++. .+.+.
T Consensus 80 ~~~~~~~~~~v~~i~~~~~-~~~~v~~~~--------g~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~ 149 (332)
T 3lzw_A 80 FDQTICLEQAVESVEKQAD-GVFKLVTNE--------ETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDDL 149 (332)
T ss_dssp SCCEEECSCCEEEEEECTT-SCEEEEESS--------EEEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSCG
T ss_pred hCCcEEccCEEEEEEECCC-CcEEEEECC--------CEEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCCH
Confidence 6888899999999998763 478888876 3599999999999533 78888899887655555665 55555
Q ss_pred CCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhh
Q 035488 172 ASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILG 251 (408)
Q Consensus 172 ~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (408)
....+++++|||+|.+|+|+|..|.+.+.+|+++++.+ .+.+...
T Consensus 150 ~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~-~~~~~~~---------------------------------- 194 (332)
T 3lzw_A 150 QKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD-KFRAHEH---------------------------------- 194 (332)
T ss_dssp GGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS-SCSSCHH----------------------------------
T ss_pred HHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC-cCCccHH----------------------------------
Confidence 56678999999999999999999999999999999887 3322110
Q ss_pred hhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCe----EEEec-----CcEEccCEEEE
Q 035488 252 NVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGK----VELVN-----GQVLEIDSVVL 320 (408)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~----v~~~~-----g~~~~~D~vi~ 320 (408)
..+.+++.+|+++.+ +.+++.+. +.+.+ ++++++|.||+
T Consensus 195 ------------------------------~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~ 244 (332)
T 3lzw_A 195 ------------------------------SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIV 244 (332)
T ss_dssp ------------------------------HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEE
T ss_pred ------------------------------HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEE
Confidence 112244567888876 77777653 77766 46799999999
Q ss_pred cCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccc---cCc---cchhhHHHHHHHHHHHhhHHhH
Q 035488 321 ATGYRSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKR---GLS---GASLDAMSVALDIAKSWKEETK 391 (408)
Q Consensus 321 atG~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~---~~~---~a~~~a~~~a~~i~~~~~~~~~ 391 (408)
|+|+.|+. .+++..++..++|++.+| +..+|+.|+|||+|||+. .+. .|..||+.+|.+|...+.+...
T Consensus 245 a~G~~p~~-~~~~~~~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 319 (332)
T 3lzw_A 245 NYGFVSSL-GPIKNWGLDIEKNSIVVK-STMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKAR 319 (332)
T ss_dssp CCCEECCC-GGGGGSSCCEETTEEECC-TTSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred eeccCCCc-hHHhhcCccccCCeEEeC-CCCceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHHhhChhhc
Confidence 99999998 678877775578889888 477899999999999973 222 6788999999999999976543
No 9
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=3.2e-36 Score=278.25 Aligned_cols=282 Identities=16% Similarity=0.220 Sum_probs=211.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCC--CCC----CCCCCCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPF--PED----FPRVPHQ 92 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~ 92 (408)
++||+|||||++|+++|..|++.|++|+|||++ +||.|.... .. ...+.++. ..+ +..+..+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~---~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 82 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAG---IV-------DDYLGLIEIQASDMIKVFNKHIEK 82 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCC---EE-------CCSTTSTTEEHHHHHHHHHHHHHT
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccc---cc-------cccCCCCCCCHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999998 888876411 10 01111110 000 1122235
Q ss_pred cCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCC
Q 035488 93 FDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGA 172 (408)
Q Consensus 93 ~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~ 172 (408)
+++++++ ++|++++... +.|.|++.++ .++.||+||+||| ..|..|.+||...+.+..++.+...+..
T Consensus 83 ~~v~~~~-~~v~~i~~~~--~~~~v~~~~g-------~~~~~d~lvlAtG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 150 (323)
T 3f8d_A 83 YEVPVLL-DIVEKIENRG--DEFVVKTKRK-------GEFKADSVILGIG--VKRRKLGVPGEQEFAGRGISYCSVADAP 150 (323)
T ss_dssp TTCCEEE-SCEEEEEEC----CEEEEESSS-------CEEEEEEEEECCC--CEECCCCCTTTTTTBTTTEESCHHHHGG
T ss_pred cCCEEEE-EEEEEEEecC--CEEEEEECCC-------CEEEcCEEEECcC--CCCccCCCCchhhhcCCceEEeccCCHh
Confidence 6788888 8999999876 6777887664 5899999999999 5578888898876544455555555545
Q ss_pred CCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhh
Q 035488 173 SYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGN 252 (408)
Q Consensus 173 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (408)
...+++++|||+|.+|+|+|..|.+.+.+|+++++++ .+.+..
T Consensus 151 ~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~-~~~~~~------------------------------------ 193 (323)
T 3f8d_A 151 LFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD-TFKAQP------------------------------------ 193 (323)
T ss_dssp GGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS-SCCSCH------------------------------------
T ss_pred HcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC-CCCcCH------------------------------------
Confidence 5678999999999999999999999999999999887 333311
Q ss_pred hhhcCCCCCCCCCcccccCCCCCcccChhhhh-hhccCCeEEecC--ccEEeCC----eEEEec---Cc--EEccCEEEE
Q 035488 253 VEKYGLKRPPTGPIELKNNEGKTPVLDIGALQ-KIRSGDIKVVPG--IKKFSPG----KVELVN---GQ--VLEIDSVVL 320 (408)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--i~~~~~~----~v~~~~---g~--~~~~D~vi~ 320 (408)
.+.+ ..++.+|+++.+ +.+++.+ .+.+.+ |+ ++++|.||+
T Consensus 194 ----------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~ 245 (323)
T 3f8d_A 194 ----------------------------IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFI 245 (323)
T ss_dssp ----------------------------HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred ----------------------------HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEE
Confidence 0112 223448888887 7777765 377766 76 789999999
Q ss_pred cCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeecccc---Cc---cchhhHHHHHHHHHHHhhHHhH
Q 035488 321 ATGYRSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRG---LS---GASLDAMSVALDIAKSWKEETK 391 (408)
Q Consensus 321 atG~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~---~~---~a~~~a~~~a~~i~~~~~~~~~ 391 (408)
|+|+.|+. .+++..++ .+.+|++.+| +..+|+.|+||++|||+.. +. .|..+|+.+|.+|.+.+.+.+.
T Consensus 246 a~G~~p~~-~~~~~~g~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 321 (323)
T 3f8d_A 246 EIGFDPPT-DFAKSNGIETDTNGYIKVD-EWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEKKG 321 (323)
T ss_dssp CCCEECCH-HHHHHTTCCBCTTSSBCCC-TTCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred EECCCCCh-hHHhhcCeeecCCCcEecC-CCceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHHHHHhhc
Confidence 99999998 67777766 5778999998 5778999999999999874 22 7889999999999999986543
No 10
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.3e-37 Score=286.62 Aligned_cols=294 Identities=21% Similarity=0.272 Sum_probs=211.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCC--CC----CCCCCCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFP--ED----FPRVPHQ 92 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~ 92 (408)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|... ++...+ +..+.++.. .+ +.++..+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~ 77 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL-YPEKYI------YDVAGFPKVYAKDLVKGLVEQVAP 77 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT-CTTSEE------CCSTTCSSEEHHHHHHHHHHHHGG
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc-CCCcee------eccCCCCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999887532 221111 111111100 00 1112235
Q ss_pred cCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCC-CCCCCCCCCCCCcceeeeeccCCCCC
Q 035488 93 FDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENA-EKIEPEFEGLQHFEGNVMHAGDYKSG 171 (408)
Q Consensus 93 ~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~-~~~~p~~~g~~~~~~~~~~~~~~~~~ 171 (408)
++++++++++|+.++... +.|.|++.++ .++.||+||+|||..+ .|..|.++|.+.+.+..++.+ +.+.
T Consensus 78 ~~~~~~~~~~v~~i~~~~--~~~~v~~~~g-------~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~-~~~~ 147 (335)
T 2zbw_A 78 FNPVYSLGERAETLEREG--DLFKVTTSQG-------NAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYA-VKSK 147 (335)
T ss_dssp GCCEEEESCCEEEEEEET--TEEEEEETTS-------CEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESS-CSCG
T ss_pred cCCEEEeCCEEEEEEECC--CEEEEEECCC-------CEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEe-cCch
Confidence 677888899999999876 5677776543 4799999999999533 577777888765433223322 2233
Q ss_pred CCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhh
Q 035488 172 ASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILG 251 (408)
Q Consensus 172 ~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (408)
....+++++|||+|.+|+|+|..|.+.|.+|+++.|++ .+.+.. +....
T Consensus 148 ~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~-~~~~~~-------~~~~~----------------------- 196 (335)
T 2zbw_A 148 AEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP-QFRAHE-------ASVKE----------------------- 196 (335)
T ss_dssp GGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCCSCH-------HHHHH-----------------------
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC-ccCccH-------HHHHH-----------------------
Confidence 34578999999999999999999999999999999987 332211 11110
Q ss_pred hhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC----eEEEe---cC--cEEccCEEEE
Q 035488 252 NVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG----KVELV---NG--QVLEIDSVVL 320 (408)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~----~v~~~---~g--~~~~~D~vi~ 320 (408)
..+.+++.+|+++.+ +.+++++ .+.+. +| +++++|.||+
T Consensus 197 ------------------------------l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~ 246 (335)
T 2zbw_A 197 ------------------------------LMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLI 246 (335)
T ss_dssp ------------------------------HHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred ------------------------------HHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEE
Confidence 123344567888877 7777654 47776 67 5799999999
Q ss_pred cCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC---c---cchhhHHHHHHHHHHHhhHHhHh
Q 035488 321 ATGYRSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRGL---S---GASLDAMSVALDIAKSWKEETKQ 392 (408)
Q Consensus 321 atG~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~---~---~a~~~a~~~a~~i~~~~~~~~~~ 392 (408)
|+|++|+. .+++..++..++|++.+| +.++|+.|+|||+|||+..+ . .|..||+.+|.+|.+.+.+....
T Consensus 247 a~G~~p~~-~~l~~~~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~ 322 (335)
T 2zbw_A 247 LAGYITKL-GPLANWGLALEKNKIKVD-TTMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYANPALKV 322 (335)
T ss_dssp CCCEEEEC-GGGGGSCCCEETTEEECC-TTCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHHHHCTTSCS
T ss_pred eecCCCCc-hHhhhcceeccCCeeeeC-CCCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 99999998 677777664447888888 46779999999999998532 2 57789999999999998765443
No 11
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=2.6e-36 Score=279.34 Aligned_cols=282 Identities=19% Similarity=0.271 Sum_probs=204.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCC---CCC----CCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPF---PED----FPRVPH 91 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~ 91 (408)
.+||+||||||+|+++|..|++.|++|+|||+. .+||.|..... +...+.++. ..+ +..+..
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~~~~ 76 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEE----------VENFPGFPEPIAGMELAQRMHQQAE 76 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSC----------BCCSTTCSSCBCHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccc----------cccCCCCCCCCCHHHHHHHHHHHHH
Confidence 469999999999999999999999999999998 68887653210 001111100 000 111222
Q ss_pred ccCccccccceeEEEEEc--CCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCC
Q 035488 92 QFDINPRFNETVQSAKYD--ETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYK 169 (408)
Q Consensus 92 ~~~~~~~~~~~V~~i~~~--~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~ 169 (408)
+++++++. ++|++++.. .. ..|.|++.++ .++.||+||+||| ..|..|.+||.+.+.+..++.+...
T Consensus 77 ~~gv~~~~-~~v~~i~~~~~~~-~~~~v~~~~g-------~~~~~~~vv~AtG--~~~~~~~i~g~~~~~~~~~~~~~~~ 145 (325)
T 2q7v_A 77 KFGAKVEM-DEVQGVQHDATSH-PYPFTVRGYN-------GEYRAKAVILATG--ADPRKLGIPGEDNFWGKGVSTCATC 145 (325)
T ss_dssp HTTCEEEE-CCEEEEEECTTSS-SCCEEEEESS-------CEEEEEEEEECCC--EEECCCCCTTTTTTBTTTEESCHHH
T ss_pred HcCCEEEe-eeEEEEEeccCCC-ceEEEEECCC-------CEEEeCEEEECcC--CCcCCCCCCChhhccCceEEEeccC
Confidence 56777776 689999876 31 2367776654 5899999999999 5677788888765544445544433
Q ss_pred CCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 035488 170 SGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLI 249 (408)
Q Consensus 170 ~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (408)
+.....+++++|||+|.+|+|+|..|.+.|.+|++++|++. +.+.. .
T Consensus 146 ~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~~~~-------~------------------------- 192 (325)
T 2q7v_A 146 DGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT-LRANK-------V------------------------- 192 (325)
T ss_dssp HGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS-CCSCH-------H-------------------------
T ss_pred CHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc-CCcch-------H-------------------------
Confidence 33445789999999999999999999999999999998872 21100 0
Q ss_pred hhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhh-ccCCeEEecC--ccEEeCC----eEEEe---cCc--EEccCE
Q 035488 250 LGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKI-RSGDIKVVPG--IKKFSPG----KVELV---NGQ--VLEIDS 317 (408)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--i~~~~~~----~v~~~---~g~--~~~~D~ 317 (408)
+.+.+ ++.+|+++.+ ++++.++ ++.+. +|+ ++++|.
T Consensus 193 --------------------------------~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~ 240 (325)
T 2q7v_A 193 --------------------------------AQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDG 240 (325)
T ss_dssp --------------------------------HHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSE
T ss_pred --------------------------------HHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCE
Confidence 01112 2357888877 7777654 46665 565 789999
Q ss_pred EEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC-c---cchhhHHHHHHHHHHHhhHHh
Q 035488 318 VVLATGYRSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGL-S---GASLDAMSVALDIAKSWKEET 390 (408)
Q Consensus 318 vi~atG~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~-~---~a~~~a~~~a~~i~~~~~~~~ 390 (408)
||+|+|++|+. .+++.. + .+.+|++.+| +.++|+.|+||++|||+... . .|..||+.+|.+|.+.+.+++
T Consensus 241 vi~a~G~~p~~-~~l~~~-~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 315 (325)
T 2q7v_A 241 VFIFIGHVPNT-AFVKDT-VSLRDDGYVDVR-DEIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQLAALE 315 (325)
T ss_dssp EEECSCEEESC-GGGTTT-SCBCTTSCBCCB-TTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEccCCCCCh-HHHhhh-cccCCCccEecC-CCCccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999998 666665 4 4668899988 45789999999999998652 2 788999999999999987643
No 12
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=6.6e-37 Score=284.78 Aligned_cols=286 Identities=19% Similarity=0.208 Sum_probs=207.8
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecC----CCCCCccCCCCCCCeeeecCCccccCCCCCC---CCC----C
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERA----NCIASLWQNRTYDRLKLHLPKQFCQLPNFPF---PED----F 86 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~----~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~ 86 (408)
.++||+|||||++|+++|..|++.|++|+|||+. ..+||.|.... ....++.++. ..+ +
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 90 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT----------EIENFPGFPDGLTGSELMDRM 90 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS----------EECCSTTCTTCEEHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch----------hhcccCCCcccCCHHHHHHHH
Confidence 3689999999999999999999999999999994 47888775421 0001111110 000 1
Q ss_pred CCCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeecc
Q 035488 87 PRVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAG 166 (408)
Q Consensus 87 ~~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~ 166 (408)
..++.++++++++++ |++++... +.|.+++...... ..+.||+||+||| ..+..|.+||...+....++.+
T Consensus 91 ~~~~~~~gv~i~~~~-v~~i~~~~--~~~~v~~~~~~~~----~~~~~d~vvlAtG--~~~~~~~~~g~~~~~~~~~~~~ 161 (338)
T 3itj_A 91 REQSTKFGTEIITET-VSKVDLSS--KPFKLWTEFNEDA----EPVTTDAIILATG--ASAKRMHLPGEETYWQKGISAC 161 (338)
T ss_dssp HHHHHHTTCEEECSC-EEEEECSS--SSEEEEETTCSSS----CCEEEEEEEECCC--EEECCCCCTTHHHHBTTTEESC
T ss_pred HHHHHHcCCEEEEeE-EEEEEEcC--CEEEEEEEecCCC----cEEEeCEEEECcC--CCcCCCCCCCchhccCccEEEc
Confidence 112225688888877 99998776 6777776422111 4789999999999 5777888888765433344544
Q ss_pred CCCCCC--CCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHH
Q 035488 167 DYKSGA--SYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLI 244 (408)
Q Consensus 167 ~~~~~~--~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 244 (408)
...+.. .+.+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .+.+..
T Consensus 162 ~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~-~~~~~~---------------------------- 212 (338)
T 3itj_A 162 AVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKD-HLRAST---------------------------- 212 (338)
T ss_dssp HHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS-SCCSCH----------------------------
T ss_pred hhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccCCCH----------------------------
Confidence 333332 4578999999999999999999999999999999887 332210
Q ss_pred HHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhcc-CCeEEecC--ccEEeCCe-----EEEec-----Cc
Q 035488 245 LARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRS-GDIKVVPG--IKKFSPGK-----VELVN-----GQ 311 (408)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--i~~~~~~~-----v~~~~-----g~ 311 (408)
.+.+.+.+ .+|+++.+ +.+++.+. +.+.+ ++
T Consensus 213 ------------------------------------~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~ 256 (338)
T 3itj_A 213 ------------------------------------IMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEET 256 (338)
T ss_dssp ------------------------------------HHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEE
T ss_pred ------------------------------------HHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceE
Confidence 11222333 48888877 77776543 77766 46
Q ss_pred EEccCEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC----ccchhhHHHHHHHHHHHh
Q 035488 312 VLEIDSVVLATGYRSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGL----SGASLDAMSVALDIAKSW 386 (408)
Q Consensus 312 ~~~~D~vi~atG~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~----~~a~~~a~~~a~~i~~~~ 386 (408)
++++|.||+|+|+.|+. .+++. ++ .+.+|++.+++..++|+.|+|||+|||+... ..|..+|+.+|.+|...+
T Consensus 257 ~i~~D~vi~a~G~~p~~-~~~~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 334 (338)
T 3itj_A 257 DLPVSGLFYAIGHTPAT-KIVAG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYL 334 (338)
T ss_dssp EEECSEEEECSCEEECC-GGGBT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCEEEEEeCCCCCh-hHhhC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHHHHH
Confidence 79999999999999998 66665 55 5678999865467889999999999998642 278899999999999988
Q ss_pred hHH
Q 035488 387 KEE 389 (408)
Q Consensus 387 ~~~ 389 (408)
.+.
T Consensus 335 ~~~ 337 (338)
T 3itj_A 335 TSL 337 (338)
T ss_dssp TTC
T ss_pred hcC
Confidence 753
No 13
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=2.7e-36 Score=283.28 Aligned_cols=294 Identities=21% Similarity=0.267 Sum_probs=208.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCC--CCC----CCCCCCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPF--PED----FPRVPHQ 92 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~ 92 (408)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++... .+..+..+. ..+ +.+.+.+
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~ 86 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL-YPEKH------IYDVAGFPEVPAIDLVESLWAQAER 86 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT-CTTSE------ECCSTTCSSEEHHHHHHHHHHHHHT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc-CCCcc------cccCCCCCCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999877532 21111 011111110 000 0111225
Q ss_pred cCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCC-CCCCCCCCC-CCCcceeeeeccCCCC
Q 035488 93 FDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENA-EKIEPEFEG-LQHFEGNVMHAGDYKS 170 (408)
Q Consensus 93 ~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~-~~~~p~~~g-~~~~~~~~~~~~~~~~ 170 (408)
++++++++++|+.++.... +.|.|++.++ ..+.||+||+|||..+ .|..|.+|| .+.+.+..++.+ +.+
T Consensus 87 ~~~~~~~~~~v~~i~~~~~-~~~~v~~~~g-------~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~-~~~ 157 (360)
T 3ab1_A 87 YNPDVVLNETVTKYTKLDD-GTFETRTNTG-------NVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYA-VKS 157 (360)
T ss_dssp TCCEEECSCCEEEEEECTT-SCEEEEETTS-------CEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESS-CSC
T ss_pred hCCEEEcCCEEEEEEECCC-ceEEEEECCC-------cEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEe-cCC
Confidence 5778888999999998652 3677877653 4799999999999644 567777888 654433223322 233
Q ss_pred CCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHh
Q 035488 171 GASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLIL 250 (408)
Q Consensus 171 ~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (408)
...+.+++++|||+|.+|+|+|..|.+.+.+|++++|++ .+.+.. ... ..
T Consensus 158 ~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~-~~~~~~-------~~~----~~------------------ 207 (360)
T 3ab1_A 158 VEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH-EFQGHG-------KTA----HE------------------ 207 (360)
T ss_dssp GGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCSSCS-------HHH----HS------------------
T ss_pred HHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-CCCCCH-------HHH----HH------------------
Confidence 344578999999999999999999999999999999887 332211 100 00
Q ss_pred hhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC-----eEEEe--cC--cEEccCEEE
Q 035488 251 GNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG-----KVELV--NG--QVLEIDSVV 319 (408)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-----~v~~~--~g--~~~~~D~vi 319 (408)
+.+..++.+|+++.+ +.+++.+ .+.+. +| +.+++|.||
T Consensus 208 -------------------------------l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi 256 (360)
T 3ab1_A 208 -------------------------------VERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLL 256 (360)
T ss_dssp -------------------------------SHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEE
T ss_pred -------------------------------HHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEE
Confidence 123344567888877 7777643 46664 77 579999999
Q ss_pred EcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC---c---cchhhHHHHHHHHHHHhhHHhH
Q 035488 320 LATGYRSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRGL---S---GASLDAMSVALDIAKSWKEETK 391 (408)
Q Consensus 320 ~atG~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~---~---~a~~~a~~~a~~i~~~~~~~~~ 391 (408)
+|+|+.|+. .+++..++...+|++.+|. .++|+.|+|||+|||+..+ . .|..||+.+|.+|.+.+...+.
T Consensus 257 ~a~G~~p~~-~~l~~~~~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 332 (360)
T 3ab1_A 257 ILIGFKSNL-GPLARWDLELYENALVVDS-HMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKPGEK 332 (360)
T ss_dssp ECCCBCCSC-GGGGGSSCCEETTEEECCT-TSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHHHHSCC--
T ss_pred ECCCCCCCH-HHHHhhccccccCeeeecC-CCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHhhcCCccc
Confidence 999999998 6777776643478888884 7779999999999998532 2 6788999999999998875443
No 14
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.7e-36 Score=274.55 Aligned_cols=277 Identities=16% Similarity=0.183 Sum_probs=205.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCC--CCC----CCCCCCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPF--PED----FPRVPHQ 92 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~ 92 (408)
++||+|||||++|+++|..|++.|++|+|||+.+..+..+... + .++.... ..+ +.+++.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~ 68 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS-H------------GFLGQDGKAPGEIIAEARRQIER 68 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC-C------------SSTTCTTCCHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh-c------------CCcCCCCCCHHHHHHHHHHHHHh
Confidence 3689999999999999999999999999999976443222110 0 0110000 000 0111113
Q ss_pred c-CccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCC
Q 035488 93 F-DINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSG 171 (408)
Q Consensus 93 ~-~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~ 171 (408)
+ ++.+. .++|+.++... +.|.|++.++ .++.||+||+||| ..|..|.+||...+.+..++.+.+.+.
T Consensus 69 ~~~v~~~-~~~v~~i~~~~--~~~~v~~~~g-------~~~~~d~vviAtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~ 136 (297)
T 3fbs_A 69 YPTIHWV-EGRVTDAKGSF--GEFIVEIDGG-------RRETAGRLILAMG--VTDELPEIAGLRERWGSAVFHCPYCHG 136 (297)
T ss_dssp CTTEEEE-ESCEEEEEEET--TEEEEEETTS-------CEEEEEEEEECCC--CEEECCCCBTTGGGBTTTEESCHHHHT
T ss_pred cCCeEEE-EeEEEEEEEcC--CeEEEEECCC-------CEEEcCEEEECCC--CCCCCCCCCCchhhcCCeeEEcccCcc
Confidence 3 44443 46999999876 6688888764 5799999999999 677888899887654445555555555
Q ss_pred CCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhh
Q 035488 172 ASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILG 251 (408)
Q Consensus 172 ~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (408)
....+++++|||+|.+|+|+|..|.+.| +|+++.+.+. .+
T Consensus 137 ~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~-~~-------------------------------------- 176 (297)
T 3fbs_A 137 YELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV-EP-------------------------------------- 176 (297)
T ss_dssp GGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC-CC--------------------------------------
T ss_pred hhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC-CC--------------------------------------
Confidence 5667899999999999999999999998 9999988762 00
Q ss_pred hhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC-ccEEeCC-eEEEecCcEEccCEEEEcCCCCCCCC
Q 035488 252 NVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG-IKKFSPG-KVELVNGQVLEIDSVVLATGYRSNVP 329 (408)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~-~v~~~~g~~~~~D~vi~atG~~~~~~ 329 (408)
.....+.+.+.+|+++.. +.+++++ .+.+.+|+++++|.||+|+|++|+.
T Consensus 177 ---------------------------~~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~~p~~- 228 (297)
T 3fbs_A 177 ---------------------------DADQHALLAARGVRVETTRIREIAGHADVVLADGRSIALAGLFTQPKLRITV- 228 (297)
T ss_dssp ---------------------------CHHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCEEEESEEEECCEEECCC-
T ss_pred ---------------------------CHHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCEEEEEEEEEccCcccCc-
Confidence 011123345567777754 7888877 7889999999999999999999998
Q ss_pred Ccccccccc-c--CCC-CCCCCCCCCCCCCCceEEEeeccccCc---cchhhHHHHHHHHHHHhhHH
Q 035488 330 SWLKENEFF-S--ENG-IPKNPFPNGWKGKTGLYAVGFTKRGLS---GASLDAMSVALDIAKSWKEE 389 (408)
Q Consensus 330 ~l~~~~~~~-~--~~g-~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~~a~~~a~~i~~~~~~~ 389 (408)
.+++..++. + .+| ++.+| +.++|+.|+||++|||+..+. .|..+|+.+|.+|.+.+...
T Consensus 229 ~~~~~~g~~~~~~~~G~~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 229 DWIEKLGCAVEEGPMGSTIVTD-PMKQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp SCHHHHTCCEEEETTEEEECCC-TTCBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhHHhcCCccccCCCCceEEeC-CCCccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 677777663 3 346 78888 567899999999999988543 78899999999999988754
No 15
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=3.4e-36 Score=276.83 Aligned_cols=280 Identities=18% Similarity=0.249 Sum_probs=201.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCC---CC----CCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV-PFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFP---ED----FPRVP 90 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~ 90 (408)
++||+|||||++|+++|..|++.|+ +|+|||++ .+||.|..... . ...+.++.. .. +.+++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~--~--------~~~~~~~~~~~~~~~~~~l~~~~ 69 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSE--I--------ENYPGVKEVVSGLDFMQPWQEQC 69 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSC--B--------CCSTTCCSCBCHHHHHHHHHHHH
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccc--c--------ccCCCCcccCCHHHHHHHHHHHH
Confidence 3689999999999999999999999 99999995 67776643210 0 001111000 00 01112
Q ss_pred CccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCC
Q 035488 91 HQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKS 170 (408)
Q Consensus 91 ~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~ 170 (408)
.++++++++ ++|++++... +.|.|++.++ .++.||+||+||| +.+..|.+||.+.+.+..++.+...+
T Consensus 70 ~~~~v~~~~-~~v~~i~~~~--~~~~v~~~~g-------~~~~~~~vv~AtG--~~~~~~~~~g~~~~~~~~~~~~~~~~ 137 (311)
T 2q0l_A 70 FRFGLKHEM-TAVQRVSKKD--SHFVILAEDG-------KTFEAKSVIIATG--GSPKRTGIKGESEYWGKGVSTCATCD 137 (311)
T ss_dssp HTTSCEEEC-SCEEEEEEET--TEEEEEETTS-------CEEEEEEEEECCC--EEECCCCCBTHHHHBTTTEESCHHHH
T ss_pred HHcCCEEEE-EEEEEEEEcC--CEEEEEEcCC-------CEEECCEEEECCC--CCCCCCCCCChhhccCCcEEEeecCC
Confidence 255777777 7899998876 6677776543 5799999999999 66778888887544333344443333
Q ss_pred CCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHh
Q 035488 171 GASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLIL 250 (408)
Q Consensus 171 ~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (408)
.....+++++|||+|.+|+|+|..|.+.|.+|++++|++. +.. .. .
T Consensus 138 ~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~~--~~-----~-------------------------- 183 (311)
T 2q0l_A 138 GFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG-FRC--AP-----I-------------------------- 183 (311)
T ss_dssp GGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS-CCS--CH-----H--------------------------
T ss_pred hhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc-cCC--CH-----H--------------------------
Confidence 3345789999999999999999999999999999998872 210 00 0
Q ss_pred hhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhh-ccCCeEEecC--ccEEeCC-----eEEEe---cCc--EEccCE
Q 035488 251 GNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKI-RSGDIKVVPG--IKKFSPG-----KVELV---NGQ--VLEIDS 317 (408)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--i~~~~~~-----~v~~~---~g~--~~~~D~ 317 (408)
..+.+ ++.+|+++.+ +.+++.+ .+.+. +|+ ++++|.
T Consensus 184 -------------------------------~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~ 232 (311)
T 2q0l_A 184 -------------------------------TLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPG 232 (311)
T ss_dssp -------------------------------HHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSE
T ss_pred -------------------------------HHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCE
Confidence 11222 2357888876 7777643 36665 565 789999
Q ss_pred EEEcCCCCCCCCCcccccc----c-ccCCCCCCCCCCCCCCCCCceEEEeecccc-Cc---cchhhHHHHHHHHHHHhhH
Q 035488 318 VVLATGYRSNVPSWLKENE----F-FSENGIPKNPFPNGWKGKTGLYAVGFTKRG-LS---GASLDAMSVALDIAKSWKE 388 (408)
Q Consensus 318 vi~atG~~~~~~~l~~~~~----~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~-~~---~a~~~a~~~a~~i~~~~~~ 388 (408)
||+|+|++|+. .+++..+ + .+.+|++.+| +.++|+.|+||++|||+.. +. .|..||+.+|.+|.+.+.+
T Consensus 233 vi~a~G~~p~~-~~l~~~g~~~~l~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 310 (311)
T 2q0l_A 233 FFIFVGYDVNN-AVLKQEDNSMLCKCDEYGSIVVD-FSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEH 310 (311)
T ss_dssp EEECSCEEECC-GGGBCTTSCBSSCBCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCccCh-hhhhcccccceeEeccCCCEEeC-CccccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHHHHHhh
Confidence 99999999998 6776653 5 4678999998 4678999999999999874 22 7889999999999988753
No 16
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.7e-35 Score=272.20 Aligned_cols=282 Identities=20% Similarity=0.267 Sum_probs=187.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCC--CC----CCCCCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPE--DF----PRVPHQ 92 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~ 92 (408)
.|||+||||||||++||..|+++|++|+|||+. .+||+.... . ....++.+.... ++ .....+
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~---~-------~i~~~p~~~~~~~~~~~~~~~~~~~~ 74 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANT---E-------EVENFPGFEMITGPDLSTKMFEHAKK 74 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGC---S-------CBCCSTTCSSBCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeecc---c-------ccCCcCCccccchHHHHHHHHHHHhh
Confidence 479999999999999999999999999999985 566643210 0 001111111000 00 000002
Q ss_pred cCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCC
Q 035488 93 FDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGA 172 (408)
Q Consensus 93 ~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~ 172 (408)
....+..+..+...... ... +...++ .+++||+|||||| ++|..|++||.+.+.+..++.+..++..
T Consensus 75 ~~~~~~~~~~~~~~~~~---~~~-~~~~~~-------~~~~~d~liiAtG--s~~~~~~ipG~~~~~~~~v~~~~~~~~~ 141 (312)
T 4gcm_A 75 FGAVYQYGDIKSVEDKG---EYK-VINFGN-------KELTAKAVIIATG--AEYKKIGVPGEQELGGRGVSYCAVCDGA 141 (312)
T ss_dssp TTCEEEECCCCEEEECS---SCE-EEECSS-------CEEEEEEEEECCC--EEECCCCCTTTTTTBTTTEESCHHHHGG
T ss_pred ccccccceeeeeeeeee---cce-eeccCC-------eEEEeceeEEccc--CccCcCCCCChhhhCCccEEeeeccCcc
Confidence 22333333333333222 222 222222 5899999999999 7888899999887655555655555555
Q ss_pred CCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhh
Q 035488 173 SYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGN 252 (408)
Q Consensus 173 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (408)
..++|+++|||+|.+|+|+|..|.+.|.+||+++|++ ++++.... .
T Consensus 142 ~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~~~~~~~-----~---------------------------- 187 (312)
T 4gcm_A 142 FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD-ELRAQRIL-----Q---------------------------- 187 (312)
T ss_dssp GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS-SCCSCHHH-----H----------------------------
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc-ccCcchhH-----H----------------------------
Confidence 6688999999999999999999999999999999988 45443321 0
Q ss_pred hhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEE--eCC-----eEE---EecCcEEccCEEEE
Q 035488 253 VEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKF--SPG-----KVE---LVNGQVLEIDSVVL 320 (408)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~--~~~-----~v~---~~~g~~~~~D~vi~ 320 (408)
...+...++..... +... ... ... ..++..+++|.|++
T Consensus 188 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~ 237 (312)
T 4gcm_A 188 ------------------------------DRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFI 237 (312)
T ss_dssp ------------------------------HHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred ------------------------------HHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEe
Confidence 00011112222211 0000 010 011 12335789999999
Q ss_pred cCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeecccc-Cc---cchhhHHHHHHHHHHHhhHHh
Q 035488 321 ATGYRSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRG-LS---GASLDAMSVALDIAKSWKEET 390 (408)
Q Consensus 321 atG~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~-~~---~a~~~a~~~a~~i~~~~~~~~ 390 (408)
++|..|+. .+++..++.+++|++++| +.++|+.|+|||+|||+.. +. .|..||+.+|.+|.++++...
T Consensus 238 ~~g~~~~~-~~~~~~g~~~~~G~I~vd-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~l~ 309 (312)
T 4gcm_A 238 YIGMKPLT-APFKDLGITNDVGYIVTK-DDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLN 309 (312)
T ss_dssp CSCEEESC-GGGGGGTCBCTTSCBCCC-TTSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcCc-hhHHhcceecCCCeEeeC-CCCccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999998 777877888889999998 5788999999999999863 32 688999999999999987643
No 17
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2.1e-36 Score=290.07 Aligned_cols=288 Identities=18% Similarity=0.243 Sum_probs=203.0
Q ss_pred CCcEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCCccCCCCCCCeeeecCCccccCC-C--CCCCCCCCCCCCccC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQG--VPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLP-N--FPFPEDFPRVPHQFD 94 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g--~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 94 (408)
++|+||||||||++||..|+++| .+|+|||+++..+ |....+ +..+.... . .........+.++.+
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMS-------FANCAL--PYVIGEVVEDRRYALAYTPEKFYDRKQ 71 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSS-------BCGGGH--HHHHTTSSCCGGGTBCCCHHHHHHHHC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCC-------CCcchh--HHHHcCCccchhhhhhcCHHHHHHhcC
Confidence 47999999999999999999998 5799999988654 221110 00000000 0 000000011223567
Q ss_pred ccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCC--C
Q 035488 95 INPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSG--A 172 (408)
Q Consensus 95 ~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~--~ 172 (408)
++++.+++|+.++... +. +++......+ ..++.||+|||||| ++|..|.++|...+....+..+..+.. .
T Consensus 72 i~~~~~~~V~~id~~~--~~--~~~~~~~~~~--~~~~~yd~lVIATG--s~p~~p~i~g~~~~~~~~~~~~~~l~~~~~ 143 (437)
T 4eqs_A 72 ITVKTYHEVIAINDER--QT--VSVLNRKTNE--QFEESYDKLILSPG--ASANSLGFESDITFTLRNLEDTDAIDQFIK 143 (437)
T ss_dssp CEEEETEEEEEEETTT--TE--EEEEETTTTE--EEEEECSEEEECCC--EEECCCCCCCTTEECCSSHHHHHHHHHHHH
T ss_pred CEEEeCCeEEEEEccC--cE--EEEEeccCCc--eEEEEcCEEEECCC--CccccccccCceEEeeccHHHHHHHHHhhh
Confidence 8888899999998766 55 4444332222 25799999999999 778888888754321110110000000 1
Q ss_pred CCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhh
Q 035488 173 SYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGN 252 (408)
Q Consensus 173 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (408)
...+++++|||+|.+|+|+|..+.+.|.+|+++++.+ ++++..+. +....
T Consensus 144 ~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~ll~~~d~-----~~~~~------------------------ 193 (437)
T 4eqs_A 144 ANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD-KINKLMDA-----DMNQP------------------------ 193 (437)
T ss_dssp HHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS-CCSTTSCG-----GGGHH------------------------
T ss_pred ccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeec-cccccccc-----hhHHH------------------------
Confidence 1247899999999999999999999999999999988 56665443 22222
Q ss_pred hhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCeEEEecCcEEccCEEEEcCCCCCCCCC
Q 035488 253 VEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGKVELVNGQVLEIDSVVLATGYRSNVPS 330 (408)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~ 330 (408)
..+.+++.+|+++.+ +.++++..+.+++|+.+++|.|++|+|++||+ .
T Consensus 194 -----------------------------~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl~a~G~~Pn~-~ 243 (437)
T 4eqs_A 194 -----------------------------ILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNS-K 243 (437)
T ss_dssp -----------------------------HHHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECSEEEECCCEEESC-G
T ss_pred -----------------------------HHHHhhccceEEEeccEEEEecCCeeeecCCeEEeeeeEEEEeceecCc-H
Confidence 233445567777776 88999999999999999999999999999998 7
Q ss_pred ccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc-------------cchhhHHHHHHHHHHH
Q 035488 331 WLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS-------------GASLDAMSVALDIAKS 385 (408)
Q Consensus 331 l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~-------------~a~~~a~~~a~~i~~~ 385 (408)
+++..++ .+.+|++.+| +.++|+.|+|||+|||+..+. .|..||+.+|++|.+.
T Consensus 244 ~~~~~gl~~~~~G~I~vd-~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~ 311 (437)
T 4eqs_A 244 FIESSNIKLDRKGFIPVN-DKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGN 311 (437)
T ss_dssp GGTTSSCCCCTTSCEECC-TTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSC
T ss_pred HHHhhhhhhccCCcEecC-CCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCC
Confidence 8888877 5778999988 578899999999999975321 4678999999999864
No 18
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=7.6e-36 Score=274.83 Aligned_cols=282 Identities=18% Similarity=0.249 Sum_probs=205.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEE-EecCCCCCCccCCCCCCCeeeecCCccccCCCCC---CCC----CCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFII-LERANCIASLWQNRTYDRLKLHLPKQFCQLPNFP---FPE----DFPRVP 90 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~l-ie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~ 90 (408)
++||+|||||++|+++|..|++.|++|+| +|+ +.+||.|..... +..++.++ ... .+..+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 72 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE----------IENYPGVAQVMDGISFMAPWSEQC 72 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC----------BCCSTTCCSCBCHHHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece----------eccCCCCCCCCCHHHHHHHHHHHH
Confidence 57999999999999999999999999999 999 678887753210 00111111 000 011223
Q ss_pred CccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCC
Q 035488 91 HQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKS 170 (408)
Q Consensus 91 ~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~ 170 (408)
.+++++++++ +|+++ .+...+.|.+++..+ .++.||+||+||| ..|..|.+||...+.+..++.+.+.+
T Consensus 73 ~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~-------~~~~~d~lvlAtG--~~~~~~~~~g~~~~~~~~~~~~~~~~ 141 (315)
T 3r9u_A 73 MRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGG-------KTELAKAVIVCTG--SAPKKAGFKGEDEFFGKGVSTCATCD 141 (315)
T ss_dssp TTTCCEEECC-CEEEE-EECTTSCEEEEETTS-------CEEEEEEEEECCC--EEECCCCCBTTTTTBTTTEESCHHHH
T ss_pred HHcCcEEEEE-EEEEE-ecCCCCcEEEEEecC-------CEEEeCEEEEeeC--CCCCCCCCCChhhcCCCeEEeeeccc
Confidence 3567888776 88888 544224566544432 2789999999999 67888889988766555566655555
Q ss_pred CCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHh
Q 035488 171 GASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLIL 250 (408)
Q Consensus 171 ~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (408)
.....+++++|||+|.+|+|+|..|.+.+.+|+++++++. +.... ++
T Consensus 142 ~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~-~~~~~-------~~------------------------- 188 (315)
T 3r9u_A 142 GFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE-FRAAP-------ST------------------------- 188 (315)
T ss_dssp GGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS-CBSCH-------HH-------------------------
T ss_pred ccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC-CCCCH-------HH-------------------------
Confidence 5556789999999999999999999999999999998872 21100 00
Q ss_pred hhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCe-----EEEe--cCc--EEccCEEE
Q 035488 251 GNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGK-----VELV--NGQ--VLEIDSVV 319 (408)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~-----v~~~--~g~--~~~~D~vi 319 (408)
..+.+++.+|+++.+ +.+++.+. +.+. +|+ ++++|.||
T Consensus 189 -------------------------------~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv 237 (315)
T 3r9u_A 189 -------------------------------VEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIF 237 (315)
T ss_dssp -------------------------------HHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEE
T ss_pred -------------------------------HHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEE
Confidence 012234568888876 77775443 6666 775 79999999
Q ss_pred EcCCCCCCCCCcccc---cc-c-ccCCCCCCCCCCCCCCCCCceEEEeecccc-C---ccchhhHHHHHHHHHHHhhH
Q 035488 320 LATGYRSNVPSWLKE---NE-F-FSENGIPKNPFPNGWKGKTGLYAVGFTKRG-L---SGASLDAMSVALDIAKSWKE 388 (408)
Q Consensus 320 ~atG~~~~~~~l~~~---~~-~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~-~---~~a~~~a~~~a~~i~~~~~~ 388 (408)
+|+|++|+. .+++. .+ + .+.+|++.+| +.++|+.|+||++|||+.. + ..|..+|+.+|.+|.+.+.+
T Consensus 238 ~a~G~~p~~-~~~~~~~~~g~l~~~~~g~i~vd-~~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 313 (315)
T 3r9u_A 238 TFVGLNVRN-EILKQDDSKFLCNMEEGGQVSVD-LKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMAYIES 313 (315)
T ss_dssp ECSCEEECC-GGGBCTTSCBSSCBCTTSCBCCC-TTCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCc-hhhhcccccceeeecCCCcEEeC-CCcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHHHHHh
Confidence 999999998 66555 33 5 5677999998 4788999999999999742 2 27889999999999998875
No 19
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.5e-36 Score=278.87 Aligned_cols=284 Identities=17% Similarity=0.239 Sum_probs=203.9
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCC---CCC----CCCC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFP---EDF----PRVP 90 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~ 90 (408)
..+||+|||||++|+++|..|++.|++|+|||+. .+||.|..... ....+.++.. .++ .++.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~~~ 81 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD----------VENYPGFRNGITGPELMDEMREQA 81 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC----------BCCSTTCTTCBCHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch----------hhhcCCCCCCCCHHHHHHHHHHHH
Confidence 3579999999999999999999999999999975 67776643210 0011111100 000 1112
Q ss_pred CccCccccccceeEEEEEcCCCCcEEE-EEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCC
Q 035488 91 HQFDINPRFNETVQSAKYDETFGFWRI-KTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYK 169 (408)
Q Consensus 91 ~~~~~~~~~~~~V~~i~~~~~~~~~~V-~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~ 169 (408)
.++++++++++ |++++. . +.|+| ++.++ .++.||+||+||| ..+..|.+||...+.+..++.+...
T Consensus 82 ~~~~v~~~~~~-v~~i~~-~--~~~~v~~~~~g-------~~~~~d~lviAtG--~~~~~~~i~g~~~~~~~~~~~~~~~ 148 (335)
T 2a87_A 82 LRFGADLRMED-VESVSL-H--GPLKSVVTADG-------QTHRARAVILAMG--AAARYLQVPGEQELLGRGVSSCATC 148 (335)
T ss_dssp HHTTCEEECCC-EEEEEC-S--SSSEEEEETTS-------CEEEEEEEEECCC--EEECCCCCTHHHHTBTTTEESCHHH
T ss_pred HHcCCEEEEee-EEEEEe-C--CcEEEEEeCCC-------CEEEeCEEEECCC--CCccCCCCCchHhccCCceEEeecc
Confidence 25677887765 888887 3 56667 55443 5799999999999 5677788887654433334443333
Q ss_pred CCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 035488 170 SGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLI 249 (408)
Q Consensus 170 ~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (408)
+.....+++++|||+|.+|+|+|..|.+.|.+|++++|++ .+.+...
T Consensus 149 ~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~-~~~~~~~-------------------------------- 195 (335)
T 2a87_A 149 DGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD-EFRASKI-------------------------------- 195 (335)
T ss_dssp HGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS-SCSSCTT--------------------------------
T ss_pred chhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC-cCCccHH--------------------------------
Confidence 3333578999999999999999999999999999999887 2211100
Q ss_pred hhhhhhcCCCCCCCCCcccccCCCCCcccChhhh-hhhccCCeEEecC--ccEEeCCe----EEEe---cC--cEEccCE
Q 035488 250 LGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGAL-QKIRSGDIKVVPG--IKKFSPGK----VELV---NG--QVLEIDS 317 (408)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~--i~~~~~~~----v~~~---~g--~~~~~D~ 317 (408)
+. +.+++.+|+++.+ +.++++++ +.+. +| +++++|.
T Consensus 196 --------------------------------~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~ 243 (335)
T 2a87_A 196 --------------------------------MLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTG 243 (335)
T ss_dssp --------------------------------HHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSC
T ss_pred --------------------------------HHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCE
Confidence 01 2234568888877 78887654 6665 34 5799999
Q ss_pred EEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC-c---cchhhHHHHHHHHHHHhhHHhHh
Q 035488 318 VVLATGYRSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGL-S---GASLDAMSVALDIAKSWKEETKQ 392 (408)
Q Consensus 318 vi~atG~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~-~---~a~~~a~~~a~~i~~~~~~~~~~ 392 (408)
||+|+|++|++ .+++ .++ .+.+|++.+|...++|+.|+|||+|||+... . .|..+|+.+|.+|...+.+++.+
T Consensus 244 vi~a~G~~p~~-~~~~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~~l~~~~~~ 321 (335)
T 2a87_A 244 VFVAIGHEPRS-GLVR-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLAEHAAT 321 (335)
T ss_dssp EEECSCEEECC-TTTB-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEccCCccCh-hHhh-cccccCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHHHhhcCcCc
Confidence 99999999998 6665 344 4678999988556789999999999998753 2 67899999999999999876654
No 20
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.5e-34 Score=272.23 Aligned_cols=298 Identities=17% Similarity=0.242 Sum_probs=200.0
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCCccCCCCCCCeeeecC---CccccCCCCCC--C--------
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGV-PFIILERANCIASLWQNRTYDRLKLHLP---KQFCQLPNFPF--P-------- 83 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~~~gg~w~~~~~~~~~~~~~---~~~~~~~~~~~--~-------- 83 (408)
..+||+|||||++|+++|..|++.|+ +|+|||+++ +||.|....... ....+ ...+.+..... .
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 80 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKST-RTITPSFTSNGFGMPDMNAISMDTSPAFTF 80 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTC-BCSSCCCCCGGGTCCCTTCSSTTCCHHHHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccc-cccCcchhcccCCchhhhhccccccccccc
Confidence 34689999999999999999999999 999999998 888775321111 11111 11111100000 0
Q ss_pred -CCCC----------CCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCC
Q 035488 84 -EDFP----------RVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEF 152 (408)
Q Consensus 84 -~~~~----------~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~ 152 (408)
..++ .+..+++++++++++|++++..+ +.|.|++.+ .++.||+||+|||.+..| .+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~--------g~~~~d~vVlAtG~~~~p---~i 147 (369)
T 3d1c_A 81 NEEHISGETYAEYLQVVANHYELNIFENTVVTNISADD--AYYTIATTT--------ETYHADYIFVATGDYNFP---KK 147 (369)
T ss_dssp CCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSEEEEESS--------CCEEEEEEEECCCSTTSB---CC
T ss_pred cccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECC--CeEEEEeCC--------CEEEeCEEEECCCCCCcc---CC
Confidence 0000 11125678888899999999876 567787654 358999999999965544 34
Q ss_pred CCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhh
Q 035488 153 EGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKY 232 (408)
Q Consensus 153 ~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 232 (408)
|+ +..+|...+.+...+++++|+|||+|.+|+|+|..|.+.|.+|+++++++.+..+..+... .
T Consensus 148 p~-----~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~-----------~ 211 (369)
T 3d1c_A 148 PF-----KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSV-----------R 211 (369)
T ss_dssp CS-----SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTT-----------S
T ss_pred CC-----CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCc-----------c
Confidence 44 2346766666655667889999999999999999999999999999998832212111100 0
Q ss_pred cchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCC-eEEecC--ccEE--eCCe--E
Q 035488 233 FPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGD-IKVVPG--IKKF--SPGK--V 305 (408)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~--i~~~--~~~~--v 305 (408)
++... .....+.+++.+ |+++.+ |.++ +++. +
T Consensus 212 ~~~~~-----------------------------------------~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v 250 (369)
T 3d1c_A 212 LSPYT-----------------------------------------RQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHI 250 (369)
T ss_dssp CCHHH-----------------------------------------HHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEE
T ss_pred CCHHH-----------------------------------------HHHHHHHHhhCCcEEEecCcEEEEEEecCCceEE
Confidence 11100 111223345565 888876 7777 4443 6
Q ss_pred EEecCcEEc-cCEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccCc-------cchhhHHH
Q 035488 306 ELVNGQVLE-IDSVVLATGYRSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS-------GASLDAMS 377 (408)
Q Consensus 306 ~~~~g~~~~-~D~vi~atG~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~-------~a~~~a~~ 377 (408)
.+.+|+.+. +|.||+|||++|+. .++.+.++.+.+|++.++...+.|+.|+||++||++.... .+..||+.
T Consensus 251 ~~~~g~~~~~~d~vi~a~G~~~~~-~~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~ 329 (369)
T 3d1c_A 251 SFDSGQSVHTPHEPILATGFDATK-NPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAV 329 (369)
T ss_dssp EESSSCCEEESSCCEECCCBCGGG-SHHHHHHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHH
T ss_pred EecCCeEeccCCceEEeeccCCcc-chhhhhhccCCCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHH
Confidence 778887765 69999999999998 4554443446788888886567899999999999876422 35678999
Q ss_pred HHHHHHHHhhH
Q 035488 378 VALDIAKSWKE 388 (408)
Q Consensus 378 ~a~~i~~~~~~ 388 (408)
+|.+|.+.+..
T Consensus 330 ~a~~l~~~~~~ 340 (369)
T 3d1c_A 330 LAHLLTQREGL 340 (369)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHhcccCC
Confidence 99999988764
No 21
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=1.6e-35 Score=274.93 Aligned_cols=286 Identities=19% Similarity=0.229 Sum_probs=200.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEec----CCCCCCccCCCCCCCeeeecCCccccCCCCCCC---CC----CC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILER----ANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFP---ED----FP 87 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~----~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~ 87 (408)
.+||+|||||++|+++|..|++.|++|+|||+ ...++|.|.... .....+.++.. .+ +.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~ 77 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTT----------DVENFPGFPEGILGVELTDKFR 77 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCS----------EECCSTTCTTCEEHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecc----------ccccCCCCccCCCHHHHHHHHH
Confidence 46899999999999999999999999999999 456666553211 00011111100 00 01
Q ss_pred CCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCC----cceeee
Q 035488 88 RVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQH----FEGNVM 163 (408)
Q Consensus 88 ~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~----~~~~~~ 163 (408)
.+..+.+++++.++ |+.++... +.|+|++ ++ .+++||+||+||| ..+..|.+||... +.+..+
T Consensus 78 ~~~~~~gv~~~~~~-v~~i~~~~--~~~~v~~-~~-------~~~~~~~vv~A~G--~~~~~~~~~g~~~~~~~~~~~~~ 144 (333)
T 1vdc_A 78 KQSERFGTTIFTET-VTKVDFSS--KPFKLFT-DS-------KAILADAVILAIG--AVAKRLSFVGSGEVLGGFWNRGI 144 (333)
T ss_dssp HHHHHTTCEEECCC-CCEEECSS--SSEEEEC-SS-------EEEEEEEEEECCC--EEECCCCCBTCSSSSSCCBTTTE
T ss_pred HHHHHCCCEEEEeE-EEEEEEcC--CEEEEEE-CC-------cEEEcCEEEECCC--CCcCCCCCCCccccccccccCcE
Confidence 11225677887765 88888765 6677776 32 6899999999999 5577778888764 322334
Q ss_pred eccCCCCCCC--CCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHH
Q 035488 164 HAGDYKSGAS--YRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKI 241 (408)
Q Consensus 164 ~~~~~~~~~~--~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~ 241 (408)
+.+...+... ..+++|+|||+|.+|+|+|..|.+.|.+|+++.|++. +.+..
T Consensus 145 ~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~-~~~~~------------------------- 198 (333)
T 1vdc_A 145 SACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA-FRASK------------------------- 198 (333)
T ss_dssp ESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS-CCSCH-------------------------
T ss_pred EEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc-CCccH-------------------------
Confidence 4333322222 5789999999999999999999999999999998872 21100
Q ss_pred HHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhh-hhhccCCeEEecC--ccEEeCCe-------EEEe---
Q 035488 242 LLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGAL-QKIRSGDIKVVPG--IKKFSPGK-------VELV--- 308 (408)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~--i~~~~~~~-------v~~~--- 308 (408)
... +.+++.+|+++.+ +.+++++. +.+.
T Consensus 199 ---------------------------------------~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~ 239 (333)
T 1vdc_A 199 ---------------------------------------IMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVV 239 (333)
T ss_dssp ---------------------------------------HHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETT
T ss_pred ---------------------------------------HHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecC
Confidence 001 2234568888876 77776432 6665
Q ss_pred cC--cEEccCEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc----cchhhHHHHHHH
Q 035488 309 NG--QVLEIDSVVLATGYRSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS----GASLDAMSVALD 381 (408)
Q Consensus 309 ~g--~~~~~D~vi~atG~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~----~a~~~a~~~a~~ 381 (408)
+| +++++|.||+|+|++|+. .+++ .++ .+.+|++.+|...++|+.|+|||+|||+..+. .|..+|+.+|.+
T Consensus 240 ~g~~~~i~~D~vi~a~G~~p~~-~~~~-~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~ 317 (333)
T 1vdc_A 240 TGDVSDLKVSGLFFAIGHEPAT-KFLD-GGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALD 317 (333)
T ss_dssp TCCEEEEECSEEEECSCEEESC-GGGT-TSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHH
T ss_pred CCceEEEecCEEEEEeCCccch-HHhh-ccccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHH
Confidence 35 578999999999999998 6665 344 46689999885557899999999999987532 688999999999
Q ss_pred HHHHhhHHhHhhh
Q 035488 382 IAKSWKEETKQKK 394 (408)
Q Consensus 382 i~~~~~~~~~~~~ 394 (408)
|...+.+.+++..
T Consensus 318 i~~~l~~~~~~~~ 330 (333)
T 1vdc_A 318 AEHYLQEIGSQEG 330 (333)
T ss_dssp HHHHHHHC-----
T ss_pred HHHHHHhcccccc
Confidence 9999987766554
No 22
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.8e-35 Score=272.93 Aligned_cols=285 Identities=21% Similarity=0.288 Sum_probs=198.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.+||+|||||++|+++|..|++.|++|+|||+. .+||.|.... .. ...+. +.......+...+..+..+++++++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~--~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~ 90 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAP--LV-ENYLG-FKSIVGSELAKLFADHAANYAKIRE 90 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCS--CB-CCBTT-BSSBCHHHHHHHHHHHHHTTSEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccc--hh-hhcCC-CcccCHHHHHHHHHHHHHHcCCEEE
Confidence 469999999999999999999999999999994 6777664211 00 00000 0000000000001111225577777
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCe
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKR 178 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 178 (408)
. .+|.+++... +.|.|++.. .++.||+||+||| +.+..|.+|+...+.+..++.+...+.....+++
T Consensus 91 ~-~~v~~i~~~~--~~~~v~~~~--------~~~~~~~li~AtG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 157 (319)
T 3cty_A 91 G-VEVRSIKKTQ--GGFDIETND--------DTYHAKYVIITTG--TTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKR 157 (319)
T ss_dssp T-CCEEEEEEET--TEEEEEESS--------SEEEEEEEEECCC--EEECCCCCBTTTTTBTTTEESCHHHHGGGGBTSE
T ss_pred E-eeEEEEEEeC--CEEEEEECC--------CEEEeCEEEECCC--CCcccCCCCChHHhCCceEEEEEecchhhcCCCe
Confidence 7 7899998766 566676622 4789999999999 5677788888765433334433333333456899
Q ss_pred EEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCC
Q 035488 179 VLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGL 258 (408)
Q Consensus 179 v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (408)
++|||+|.+|+|+|..|.+.+.+|+++++.+. +.+..
T Consensus 158 v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~-~~~~~------------------------------------------ 194 (319)
T 3cty_A 158 VVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK-YMCEN------------------------------------------ 194 (319)
T ss_dssp EEEECCSHHHHHHHHHHTTTBSEEEEECSSSS-CCSCH------------------------------------------
T ss_pred EEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc-cCCCH------------------------------------------
Confidence 99999999999999999999999999998772 21100
Q ss_pred CCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC-----eEEEe---cCc--EEccCEEEEcCCCCC
Q 035488 259 KRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG-----KVELV---NGQ--VLEIDSVVLATGYRS 326 (408)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-----~v~~~---~g~--~~~~D~vi~atG~~~ 326 (408)
.+.+.+.+.+|+++.+ +.++..+ ++.+. +|+ .+++|.||+|+|+.|
T Consensus 195 ----------------------~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 195 ----------------------AYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp ----------------------HHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEE
T ss_pred ----------------------HHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCcc
Confidence 0112223446677665 6666543 35665 565 689999999999999
Q ss_pred CCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC-c---cchhhHHHHHHHHHHHhhH
Q 035488 327 NVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGL-S---GASLDAMSVALDIAKSWKE 388 (408)
Q Consensus 327 ~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~-~---~a~~~a~~~a~~i~~~~~~ 388 (408)
+. .+++..++ .+.+|++.+| +.++|+.|+|||+|||+..+ . .|..||+.+|.+|.+.+.+
T Consensus 253 ~~-~~l~~~gl~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 253 QT-SFLKDSGVKLDERGYIVVD-SRQRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp CC-GGGTTSCCCBCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred Ch-HHHhhccccccCCccEeCC-CCCccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHhhc
Confidence 98 77777666 5678999988 45789999999999998753 2 6889999999999998865
No 23
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=2.2e-35 Score=270.41 Aligned_cols=283 Identities=15% Similarity=0.247 Sum_probs=193.3
Q ss_pred cccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCC----CCCCCc
Q 035488 17 IWVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDF----PRVPHQ 92 (408)
Q Consensus 17 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 92 (408)
|..|||+||||||||++||..|++.|++|+|||++. +||.+..+ |++.. ..+... +.++ .+...+
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~~~~-~~~~~--------~~~~~~-~~~~~~~~~~~~~~ 72 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRVTQN-SHGFI--------TRDGIK-PEEFKEIGLNEVMK 72 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGGSSC-BCCST--------TCTTBC-HHHHHHHHHHHHTT
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCeeeee-cCCcc--------CCCCCC-HHHHHHHHHHHHHh
Confidence 446799999999999999999999999999999874 45543221 11110 000000 0000 001112
Q ss_pred cCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCC
Q 035488 93 FDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGA 172 (408)
Q Consensus 93 ~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~ 172 (408)
++...+....+..+..... +.|+|.+.++ .+++||+|||||| ++|..|++||.+.+.+..++.+..++..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~g-------~~~~a~~liiATG--s~p~~p~i~G~~~~~~~~v~~~~~~~~~ 142 (304)
T 4fk1_A 73 YPSVHYYEKTVVMITKQST-GLFEIVTKDH-------TKYLAERVLLATG--MQEEFPSIPNVREYYGKSLFSCPYCDGW 142 (304)
T ss_dssp STTEEEEECCEEEEEECTT-SCEEEEETTC-------CEEEEEEEEECCC--CEEECCSCTTHHHHBTTTEESCHHHHSG
T ss_pred cCCEEEEeeEEEEeeecCC-CcEEEEECCC-------CEEEeCEEEEccC--CccccccccCccccccceeeeccccchh
Confidence 3333344456666665543 5677877665 6899999999999 7889999999765444444444444445
Q ss_pred CCCCCeEEEEccCCc-HHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhh
Q 035488 173 SYRGKRVLVVGCGNS-GMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILG 251 (408)
Q Consensus 173 ~~~~~~v~VvG~G~~-a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (408)
...+++++|||+|.. ++|+|..+...+.+|+++.+.+ .+.+ .
T Consensus 143 ~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~-~~~~-------------~----------------------- 185 (304)
T 4fk1_A 143 ELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN-ELSQ-------------T----------------------- 185 (304)
T ss_dssp GGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC-CCCH-------------H-----------------------
T ss_pred HhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccc-cchh-------------h-----------------------
Confidence 567788888888865 6788888888899999887765 1111 0
Q ss_pred hhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC-ccEEeCC-----eEEEecCcEEccCEEEEcCCCC
Q 035488 252 NVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG-IKKFSPG-----KVELVNGQVLEIDSVVLATGYR 325 (408)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~-----~v~~~~g~~~~~D~vi~atG~~ 325 (408)
..+.+.+.++.++.+ +..+..+ .+.+.+|+++++|.++++.|..
T Consensus 186 ------------------------------~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~ 235 (304)
T 4fk1_A 186 ------------------------------IMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFF 235 (304)
T ss_dssp ------------------------------HHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEEE
T ss_pred ------------------------------hhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeeccc
Confidence 112223334444444 4444432 3788899999999999888887
Q ss_pred CCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC----ccchhhHHHHHHHHHHHhhHH
Q 035488 326 SNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGL----SGASLDAMSVALDIAKSWKEE 389 (408)
Q Consensus 326 ~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~----~~a~~~a~~~a~~i~~~~~~~ 389 (408)
|+. .+++..++ .+++|++++| +.++|+.|+|||+|||+... ..|..+|+.+|..|.++|..+
T Consensus 236 ~~~-~~~~~~g~~~~~~G~I~vd-~~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 236 RPN-QFIEQLGCELQSNGTFVID-DFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp CSS-CHHHHTTCCCCTTSSSCSS-TTCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCC-hhhhhcCeEECCCCCEEEC-cCCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 776 67777777 6778999998 57889999999999998532 268889999999999998764
No 24
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=3.2e-35 Score=270.15 Aligned_cols=284 Identities=19% Similarity=0.252 Sum_probs=201.6
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCC---CCCCCCCCCCccCcc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFP---FPEDFPRVPHQFDIN 96 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 96 (408)
+||+||||||+|+++|..|++.|++|+|||+ .+||.|.... .. +. +...+... +...+..++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~--~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~v~ 72 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTV--DI----EN-YISVPKTEGQKLAGALKVHVDEYDVD 72 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCC--EE----CC-BTTBSSEEHHHHHHHHHHHHHTSCEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccc--cc----cc-ccCcCCCCHHHHHHHHHHHHHHcCCe
Confidence 5899999999999999999999999999986 4677775311 00 00 00000000 000011122356788
Q ss_pred ccccceeEEEEEcCC-CCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCCCC
Q 035488 97 PRFNETVQSAKYDET-FGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYR 175 (408)
Q Consensus 97 ~~~~~~V~~i~~~~~-~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~ 175 (408)
++.+++|+.++.... .+.|.|++.++ .++.||+||+||| +.|..|.+||.+.+....++.+...+.....
T Consensus 73 ~~~~~~v~~i~~~~~~~~~~~v~~~~g-------~~~~~~~lv~AtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 143 (310)
T 1fl2_A 73 VIDSQSASKLIPAAVEGGLHQIETASG-------AVLKARSIIVATG--AKWRNMNVPGEDQYRTKGVTYCPHCDGPLFK 143 (310)
T ss_dssp EECSCCEEEEECCSSTTCCEEEEETTS-------CEEEEEEEEECCC--EEECCCCCTTTTTTBTTTEESCHHHHGGGGB
T ss_pred EEccCEEEEEEecccCCceEEEEECCC-------CEEEeCEEEECcC--CCcCCCCCCChhhcccceeEEeccCcHhhcC
Confidence 889889999986532 13677887654 4799999999999 5567778888765543334443333233456
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhh
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVEK 255 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (408)
+++++|||+|.+|+|+|..|...+.+|+++.|.+. +. .. +
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~--~~------~------------------------------- 183 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE-MK--AD------Q------------------------------- 183 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS-CC--SC------H-------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc-cC--cc------H-------------------------------
Confidence 89999999999999999999999999999998872 21 00 0
Q ss_pred cCCCCCCCCCcccccCCCCCcccChhhhhhhcc-CCeEEecC--ccEEeCC-----eEEEec---Cc--EEccCEEEEcC
Q 035488 256 YGLKRPPTGPIELKNNEGKTPVLDIGALQKIRS-GDIKVVPG--IKKFSPG-----KVELVN---GQ--VLEIDSVVLAT 322 (408)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--i~~~~~~-----~v~~~~---g~--~~~~D~vi~at 322 (408)
...+.+.+ .+|+++.+ +.++.++ .+.+.+ |+ ++++|.||+|+
T Consensus 184 -------------------------~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~ 238 (310)
T 1fl2_A 184 -------------------------VLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQI 238 (310)
T ss_dssp -------------------------HHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECS
T ss_pred -------------------------HHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEee
Confidence 01122333 57888877 7777654 366654 43 68999999999
Q ss_pred CCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc----cchhhHHHHHHHHHHHhhHH
Q 035488 323 GYRSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS----GASLDAMSVALDIAKSWKEE 389 (408)
Q Consensus 323 G~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~----~a~~~a~~~a~~i~~~~~~~ 389 (408)
|+.|+. .+++.. + .+.+|++.+|. .++|+.|+|||+|||+..+. .|..+|+.+|.+|...+.++
T Consensus 239 G~~p~~-~~l~~~-l~~~~~g~i~vd~-~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 307 (310)
T 1fl2_A 239 GLLPNT-NWLEGA-VERNRMGEIIIDA-KCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRT 307 (310)
T ss_dssp CEEESC-GGGTTT-SCBCTTSCBCCCT-TCBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCccCc-hHHhcc-ccccCCCcEEcCC-CCccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHHHHh
Confidence 999998 666654 4 46788999884 56799999999999987542 68899999999999988653
No 25
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=2.4e-35 Score=271.52 Aligned_cols=285 Identities=18% Similarity=0.244 Sum_probs=182.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCC-------CCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPED-------FPRVPH 91 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 91 (408)
+|||+||||||||++||..|+++|++|+|||+... +|...... +.....+..++.++.... +.....
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~-gg~~~~G~-----~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~ 77 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA-GGVAAGGQ-----LTTTTIIENFPGFPNGIDGNELMMNMRTQSE 77 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG-GGCCTTCG-----GGGSSEECCSTTCTTCEEHHHHHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCcccCCC-----cCChHHhhhccCCcccCCHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999752 22111000 000011111221110000 000111
Q ss_pred ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCC
Q 035488 92 QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSG 171 (408)
Q Consensus 92 ~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~ 171 (408)
+++..+.. .+|....... +.+.+.+.++ .++.||+||+||| +.|..|++||.+......++.+..++.
T Consensus 78 ~~~~~~~~-~~v~~~~~~~--~~~~~~~~~~-------~~~~~~~liiATG--~~~~~~~ipG~~~~~~~~~~~~~~~~~ 145 (314)
T 4a5l_A 78 KYGTTIIT-ETIDHVDFST--QPFKLFTEEG-------KEVLTKSVIIATG--ATAKRMHVPGEDKYWQNGVSACAICDG 145 (314)
T ss_dssp HTTCEEEC-CCEEEEECSS--SSEEEEETTC-------CEEEEEEEEECCC--EEECCCCCTTHHHHBTTTEESCHHHHT
T ss_pred hcCcEEEE-eEEEEeecCC--CceEEEECCC-------eEEEEeEEEEccc--ccccccCCCccccccccceeeehhhhh
Confidence 33444333 4455555444 4555555443 6899999999999 788888999976543333444433322
Q ss_pred --CCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 035488 172 --ASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLI 249 (408)
Q Consensus 172 --~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (408)
..+.+++++|||+|.+|+|+|..|.+.|.+|++++|.+. ..+... ...
T Consensus 146 ~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~-~~~~~~-------~~~---------------------- 195 (314)
T 4a5l_A 146 AVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA-FRASKT-------MQE---------------------- 195 (314)
T ss_dssp TSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS-CCSCHH-------HHH----------------------
T ss_pred hhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc-ccccch-------hhh----------------------
Confidence 234689999999999999999999999999999998772 211110 000
Q ss_pred hhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC-----eEEE-----ecCcEEccCE
Q 035488 250 LGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG-----KVEL-----VNGQVLEIDS 317 (408)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-----~v~~-----~~g~~~~~D~ 317 (408)
+.....+++.+.. +.++... ++.+ .+++++++|.
T Consensus 196 ----------------------------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~ 241 (314)
T 4a5l_A 196 ----------------------------------RVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAG 241 (314)
T ss_dssp ----------------------------------HHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSE
T ss_pred ----------------------------------hhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeecccc
Confidence 0011112222222 2222211 1222 3456899999
Q ss_pred EEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccCc----cchhhHHHHHHHHHHHhhH
Q 035488 318 VVLATGYRSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS----GASLDAMSVALDIAKSWKE 388 (408)
Q Consensus 318 vi~atG~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~----~a~~~a~~~a~~i~~~~~~ 388 (408)
|++++|++||+ .++......+++|+++.+ .++|+.|+|||+|||+..+. .|+.+|+.||.++.++|+.
T Consensus 242 vi~a~G~~pn~-~~l~~~~~~~~~G~iv~~--~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 242 LFYAIGHSPNS-KFLGGQVKTADDGYILTE--GPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp EEECSCEEESC-GGGTTSSCBCTTSCBCCB--TTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEecccccCh-hHhcccceEcCCeeEeCC--CCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999 666655446778877544 67899999999999987643 5888999999999988853
No 26
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=2.7e-35 Score=271.85 Aligned_cols=284 Identities=19% Similarity=0.285 Sum_probs=199.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCC---CC----CCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFP---ED----FPRVPH 91 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~ 91 (408)
.+||+|||||++|+++|..|++.|++|+|||+. .+||.|..... ....+.++.. .+ +..+..
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE----------VENWPGDPNDLTGPLLMERMHEHAT 73 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB----------CCCSTTCCSSCBHHHHHHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh----------hhhCCCCCCCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999999999975 67776543110 0011111100 00 011122
Q ss_pred ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCC
Q 035488 92 QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSG 171 (408)
Q Consensus 92 ~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~ 171 (408)
+++++++.++ |+.++... +.|.| +.++ .++.||+||+||| ..|..|.+||...+.+..++.+...+.
T Consensus 74 ~~~~~~~~~~-v~~i~~~~--~~~~v-~~~~-------~~~~~~~lv~AtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~ 140 (320)
T 1trb_A 74 KFETEIIFDH-INKVDLQN--RPFRL-NGDN-------GEYTCDALIIATG--ASARYLGLPSEEAFKGRGVSACATSDG 140 (320)
T ss_dssp HTTCEEECCC-EEEEECSS--SSEEE-EESS-------CEEEEEEEEECCC--EEECCCCCHHHHHTBTTTEESCHHHHG
T ss_pred HCCCEEEEee-eeEEEecC--CEEEE-EeCC-------CEEEcCEEEECCC--CCcCCCCCCChHHhCCceeEecccCCc
Confidence 5577777765 88888765 66767 4433 5799999999999 567777888765443333444333333
Q ss_pred CCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhh
Q 035488 172 ASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILG 251 (408)
Q Consensus 172 ~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (408)
....+++++|||+|.+|+|+|..|.+.|.+|++++|++ .+.+.. .+..
T Consensus 141 ~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~~-------~~~~------------------------ 188 (320)
T 1trb_A 141 FFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD-GFRAEK-------ILIK------------------------ 188 (320)
T ss_dssp GGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS-SCCCCH-------HHHH------------------------
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-ccccCH-------HHHH------------------------
Confidence 33578999999999999999999999999999999887 221110 1111
Q ss_pred hhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCe-----EEEec----C--cEEccCEE
Q 035488 252 NVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGK-----VELVN----G--QVLEIDSV 318 (408)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~-----v~~~~----g--~~~~~D~v 318 (408)
...+.+++.+|+++.+ +.+++.+. +.+.+ | +++++|.|
T Consensus 189 -----------------------------~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~v 239 (320)
T 1trb_A 189 -----------------------------RLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL 239 (320)
T ss_dssp -----------------------------HHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEE
T ss_pred -----------------------------HHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEE
Confidence 1123345568888876 77776543 66664 4 57999999
Q ss_pred EEcCCCCCCCCCccccccc-ccCCCCCCCCCCC----CCCCCCceEEEeeccccCc----cchhhHHHHHHHHHHHhhHH
Q 035488 319 VLATGYRSNVPSWLKENEF-FSENGIPKNPFPN----GWKGKTGLYAVGFTKRGLS----GASLDAMSVALDIAKSWKEE 389 (408)
Q Consensus 319 i~atG~~~~~~~l~~~~~~-~~~~g~~~~~~~~----~~t~~~~iya~Gd~~~~~~----~a~~~a~~~a~~i~~~~~~~ 389 (408)
|+|+|++|+. .+++ .++ .+ +|++.+|..+ ++|+.|+||++|||+.... .|..+|+.+|.+|...+.+.
T Consensus 240 v~a~G~~p~~-~~~~-~~l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 316 (320)
T 1trb_A 240 FVAIGHSPNT-AIFE-GQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGL 316 (320)
T ss_dssp EECSCEEESC-GGGT-TTSCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred EEEeCCCCCh-HHhc-cccccc-CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHHHHHHHhc
Confidence 9999999998 6665 334 45 8999988542 4799999999999987532 68899999999999999764
Q ss_pred h
Q 035488 390 T 390 (408)
Q Consensus 390 ~ 390 (408)
.
T Consensus 317 ~ 317 (320)
T 1trb_A 317 A 317 (320)
T ss_dssp -
T ss_pred c
Confidence 4
No 27
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.4e-35 Score=279.38 Aligned_cols=272 Identities=15% Similarity=0.193 Sum_probs=195.4
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCC-CCCCCCCCCCCCccCcc
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPN-FPFPEDFPRVPHQFDIN 96 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 96 (408)
..++|+|||||+||++||..|+..+.+|+|||+++.++ |....+. ..+..... ........++..+++++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~-------y~~~~l~--~~l~g~~~~~~l~~~~~~~~~~~~i~ 78 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP-------YYRPRLN--EIIAKNKSIDDILIKKNDWYEKNNIK 78 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC-------BCGGGHH--HHHHSCCCGGGTBSSCHHHHHHTTCE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC-------cccChhh--HHHcCCCCHHHccCCCHHHHHHCCCE
Confidence 36789999999999999999987889999999998765 2221111 11101000 00111122233467889
Q ss_pred ccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCC---
Q 035488 97 PRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGAS--- 173 (408)
Q Consensus 97 ~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~--- 173 (408)
++++++|++++... +. |++.++ .++.||+||+||| +.|..|++||.+ .+++.....+...
T Consensus 79 ~~~~~~V~~id~~~--~~--v~~~~g-------~~~~yd~lvlAtG--~~p~~p~i~G~~----~v~~~~~~~d~~~l~~ 141 (385)
T 3klj_A 79 VITSEFATSIDPNN--KL--VTLKSG-------EKIKYEKLIIASG--SIANKIKVPHAD----EIFSLYSYDDALKIKD 141 (385)
T ss_dssp EECSCCEEEEETTT--TE--EEETTS-------CEEECSEEEECCC--EEECCCCCTTCS----CEECCSSHHHHHHHHH
T ss_pred EEeCCEEEEEECCC--CE--EEECCC-------CEEECCEEEEecC--CCcCCCCCCCCC----CeEEeCCHHHHHHHHH
Confidence 99999999998765 44 777664 5899999999999 788888999876 2333222222111
Q ss_pred --CCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhh
Q 035488 174 --YRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILG 251 (408)
Q Consensus 174 --~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (408)
..+++++|||+|.+|+|+|..|.+.|.+|+++++.+ ++++.... .+....
T Consensus 142 ~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~~~----~~~~~~----------------------- 193 (385)
T 3klj_A 142 ECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILE-YPLERQLD----RDGGLF----------------------- 193 (385)
T ss_dssp HHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS-SSCTTTSC----HHHHHH-----------------------
T ss_pred HhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcC----HHHHHH-----------------------
Confidence 127899999999999999999999999999999998 55554221 011111
Q ss_pred hhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCeEEEecCcEEccCEEEEcCCCCCCCC
Q 035488 252 NVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGKVELVNGQVLEIDSVVLATGYRSNVP 329 (408)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~ 329 (408)
+.+.+++.+|+++.+ +.++ |+++++|.||+|+|++|++
T Consensus 194 ------------------------------~~~~l~~~gV~~~~~~~v~~i---------g~~~~~D~vv~a~G~~p~~- 233 (385)
T 3klj_A 194 ------------------------------LKDKLDRLGIKIYTNSNFEEM---------GDLIRSSCVITAVGVKPNL- 233 (385)
T ss_dssp ------------------------------HHHHHHTTTCEEECSCCGGGC---------HHHHHHSEEEECCCEEECC-
T ss_pred ------------------------------HHHHHHhCCCEEEeCCEEEEc---------CeEEecCeEEECcCcccCh-
Confidence 123345567888766 5544 6679999999999999998
Q ss_pred CcccccccccCCCCCCCCCCCCCCCCCceEEEeecccc----C---ccchhhHHHHHHHHHHH
Q 035488 330 SWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRG----L---SGASLDAMSVALDIAKS 385 (408)
Q Consensus 330 ~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~----~---~~a~~~a~~~a~~i~~~ 385 (408)
.+++..++..++| +.+| +.++|+.|+|||+|||+.. + ..|..||+.+|.+|.+.
T Consensus 234 ~~~~~~gl~~~~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 294 (385)
T 3klj_A 234 DFIKDTEIASKRG-ILVN-DHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGE 294 (385)
T ss_dssp GGGTTSCCCBSSS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTC
T ss_pred hhhhhcCCCcCCC-EEEC-CCcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCC
Confidence 7888888766666 7677 5788999999999999862 2 26889999999999864
No 28
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=5.6e-35 Score=278.45 Aligned_cols=280 Identities=20% Similarity=0.213 Sum_probs=200.2
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCC--EEEEecCCCCCCccCCCCCCCeeeecCCcccc--CCCCCCCCCCCCCCCccCc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVP--FIILERANCIASLWQNRTYDRLKLHLPKQFCQ--LPNFPFPEDFPRVPHQFDI 95 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~--v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 95 (408)
++|+|||||++|++||..|++.|++ |+|||+++.++ |....+. +.+.. ...... ....++..+.++
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~-------y~~~~l~--~~~~~g~~~~~~~-~~~~~~~~~~~i 72 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP-------YDRPSLS--KAVLDGSLERPPI-LAEADWYGEARI 72 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS-------BCSGGGG--THHHHTSSSSCCB-SSCTTHHHHTTC
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCC-------cCCcccc--HHHhCCCCCHHHh-cCCHHHHHHCCC
Confidence 4899999999999999999999987 99999998765 2211110 10000 000001 122334446788
Q ss_pred cccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCC-----
Q 035488 96 NPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKS----- 170 (408)
Q Consensus 96 ~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~----- 170 (408)
+++.+++|+.++... +. |++.++ .++.||+||+||| +.|..|++||.+.. .+++.....+
T Consensus 73 ~~~~~~~v~~id~~~--~~--v~~~~g-------~~~~~d~lvlAtG--~~p~~~~ipG~~~~--~v~~~~~~~d~~~l~ 137 (410)
T 3ef6_A 73 DMLTGPEVTALDVQT--RT--ISLDDG-------TTLSADAIVIATG--SRARTMALPGSQLP--GVVTLRTYGDVQVLR 137 (410)
T ss_dssp EEEESCCEEEEETTT--TE--EEETTS-------CEEECSEEEECCC--EEECCCCCTTTTST--TEECCCSHHHHHHHH
T ss_pred EEEeCCEEEEEECCC--CE--EEECCC-------CEEECCEEEEccC--CcccCCCCCCcccc--ceEEeccHHHHHHHH
Confidence 999999999998665 33 777654 5899999999999 67888888886531 2222211111
Q ss_pred CCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHh
Q 035488 171 GASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLIL 250 (408)
Q Consensus 171 ~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (408)
.....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .+++.... .++...
T Consensus 138 ~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~~~----~~~~~~---------------------- 190 (410)
T 3ef6_A 138 DSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGD-ELLVRVLG----RRIGAW---------------------- 190 (410)
T ss_dssp HHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSHHHHC----HHHHHH----------------------
T ss_pred HHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-ccchhhcC----HHHHHH----------------------
Confidence 112358999999999999999999999999999999988 44332111 011111
Q ss_pred hhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC----eEEEecCcEEccCEEEEcCCC
Q 035488 251 GNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG----KVELVNGQVLEIDSVVLATGY 324 (408)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~----~v~~~~g~~~~~D~vi~atG~ 324 (408)
+.+.+++.+|+++.+ +.+++++ .+.+.+|+++++|.||+|+|+
T Consensus 191 -------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 191 -------------------------------LRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGA 239 (410)
T ss_dssp -------------------------------HHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCE
T ss_pred -------------------------------HHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCC
Confidence 123344557888766 7788765 488899999999999999999
Q ss_pred CCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC------------ccchhhHHHHHHHHHHH
Q 035488 325 RSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRGL------------SGASLDAMSVALDIAKS 385 (408)
Q Consensus 325 ~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~------------~~a~~~a~~~a~~i~~~ 385 (408)
+|+. .+++..++..++| +.+| ...+|+.|+|||+|||+..+ ..|..||+.+|.+|.+.
T Consensus 240 ~p~~-~l~~~~gl~~~~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 309 (410)
T 3ef6_A 240 EPAD-QLARQAGLACDRG-VIVD-HCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGK 309 (410)
T ss_dssp EECC-HHHHHTTCCBSSS-EECC-TTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred eecH-HHHHhCCCccCCe-EEEc-cCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCC
Confidence 9998 6788777755555 6677 46789999999999997642 26889999999999864
No 29
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.4e-34 Score=276.52 Aligned_cols=282 Identities=20% Similarity=0.196 Sum_probs=198.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCC--EEEEecCCCCCCccCCCCCCCeeeecCCccccC--CCCCCCCCCCCCCCccC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVP--FIILERANCIASLWQNRTYDRLKLHLPKQFCQL--PNFPFPEDFPRVPHQFD 94 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~--v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 94 (408)
.++|+|||||++|+++|..|++.|++ |+|||+++.++ |....+. +.+... ...........+..+.+
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~-------y~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIP-------YERPPLS--KEYLAREKTFERICIRPAQFWEDKA 79 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCC-------BCSGGGG--TTTTTTSSCSGGGBSSCHHHHHHTT
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCC-------cCcccCC--HHHHcCCCCHHHhccCCHHHHHHCC
Confidence 46899999999999999999999987 99999998754 2211110 010000 00000001112233568
Q ss_pred ccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCC---
Q 035488 95 INPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSG--- 171 (408)
Q Consensus 95 ~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~--- 171 (408)
++++.+++|+.++... .. |++.++ ..+.||+||+||| +.|..|++||.+.. .+.+.....+.
T Consensus 80 i~~~~~~~v~~id~~~--~~--v~~~~g-------~~~~~d~lvlAtG--~~~~~~~i~g~~~~--~v~~~~~~~d~~~l 144 (415)
T 3lxd_A 80 VEMKLGAEVVSLDPAA--HT--VKLGDG-------SAIEYGKLIWATG--GDPRRLSCVGADLA--GVHAVRTKEDADRL 144 (415)
T ss_dssp EEEEETCCEEEEETTT--TE--EEETTS-------CEEEEEEEEECCC--EECCCCBTTSSCCB--TEECCCSHHHHHHH
T ss_pred cEEEeCCEEEEEECCC--CE--EEECCC-------CEEEeeEEEEccC--CccCCCCCCCcccc--CEEEEcCHHHHHHH
Confidence 8888999999998665 33 776654 5899999999999 77888888886531 12221111110
Q ss_pred --CCCC-CCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHH
Q 035488 172 --ASYR-GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARL 248 (408)
Q Consensus 172 --~~~~-~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 248 (408)
.... +++++|||+|.+|+|+|..+...|.+|+++++.+ .+++.... .++...
T Consensus 145 ~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~l~~~~~----~~~~~~-------------------- 199 (415)
T 3lxd_A 145 MAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP-RVLARVAG----EALSEF-------------------- 199 (415)
T ss_dssp HHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSC----HHHHHH--------------------
T ss_pred HHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC-chhhhhcC----HHHHHH--------------------
Confidence 0113 8999999999999999999999999999999988 44443211 011111
Q ss_pred HhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC-----eEEEecCcEEccCEEEEc
Q 035488 249 ILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG-----KVELVNGQVLEIDSVVLA 321 (408)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-----~v~~~~g~~~~~D~vi~a 321 (408)
+.+.+++.+|+++.+ +++++.+ .+.+.+|+++++|.||+|
T Consensus 200 ---------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a 246 (415)
T 3lxd_A 200 ---------------------------------YQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVG 246 (415)
T ss_dssp ---------------------------------HHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEEC
T ss_pred ---------------------------------HHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEEC
Confidence 123345567888766 7777653 478889999999999999
Q ss_pred CCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC--------------ccchhhHHHHHHHHHHH
Q 035488 322 TGYRSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRGL--------------SGASLDAMSVALDIAKS 385 (408)
Q Consensus 322 tG~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~--------------~~a~~~a~~~a~~i~~~ 385 (408)
+|+.|++ .+++..++..++| +.+| +..+|+.|+|||+|||+..+ ..|..||+.+|.+|.+.
T Consensus 247 ~G~~p~~-~l~~~~gl~~~~g-i~vd-~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 321 (415)
T 3lxd_A 247 IGIVPCV-GALISAGASGGNG-VDVD-EFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGA 321 (415)
T ss_dssp SCCEESC-HHHHHTTCCCSSS-EECC-TTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTC
T ss_pred CCCccCh-HHHHhCCCCcCCC-EEEC-CCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCC
Confidence 9999998 6777777755566 7777 56789999999999987543 25788999999999864
No 30
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.9e-33 Score=267.64 Aligned_cols=278 Identities=20% Similarity=0.211 Sum_probs=199.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV--PFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDIN 96 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~--~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (408)
.+||+|||||++|+++|..|++.|. +|+|||++++++ |..... ++.+..... .....+. +..+.+++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~~~--~~~~~~~~~-~~~~~~~-~~~~~~v~ 75 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP-------YDRPPL--SKDFMAHGD-AEKIRLD-CKRAPEVE 75 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC-------BCSGGG--GTHHHHHCC-GGGSBCC-CTTSCSCE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc-------ccCCCC--CHHHhCCCc-hhhhhHH-HHHHCCCE
Confidence 4689999999999999999999997 599999988754 211100 000000000 0000111 44566889
Q ss_pred ccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCC-CCCCCcceeeeeccCCCC-----
Q 035488 97 PRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEF-EGLQHFEGNVMHAGDYKS----- 170 (408)
Q Consensus 97 ~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~-~g~~~~~~~~~~~~~~~~----- 170 (408)
++.+++|+.++... ++|++.++ .++.||+||+||| +.|..|++ ||.+ . .+++.....+
T Consensus 76 ~~~~~~v~~i~~~~----~~v~~~~g-------~~~~~d~lviAtG--~~~~~~~i~~G~~--~-~v~~~~~~~~~~~l~ 139 (408)
T 2gqw_A 76 WLLGVTAQSFDPQA----HTVALSDG-------RTLPYGTLVLATG--AAPRALPTLQGAT--M-PVHTLRTLEDARRIQ 139 (408)
T ss_dssp EEETCCEEEEETTT----TEEEETTS-------CEEECSEEEECCC--EEECCCGGGTTCS--S-CEEECCSHHHHHHHH
T ss_pred EEcCCEEEEEECCC----CEEEECCC-------CEEECCEEEECCC--CCCCCCCccCCCC--C-cEEEECCHHHHHHHH
Confidence 99999999998654 34777553 5899999999999 67888888 8865 1 2222211111
Q ss_pred CCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecc-cccCCchHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 035488 171 GASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPR-EVLGKSTFQLAVLMMKYFPLWLVDKILLILARLI 249 (408)
Q Consensus 171 ~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (408)
.....+++++|||+|.+|+|+|..|.+.|.+|+++++.+ ++++. ... ++...+
T Consensus 140 ~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~-----~~~~~l-------------------- 193 (408)
T 2gqw_A 140 AGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP-RLMSRAAPA-----TLADFV-------------------- 193 (408)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTSCH-----HHHHHH--------------------
T ss_pred HHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-cccccccCH-----HHHHHH--------------------
Confidence 112257999999999999999999999999999999988 55553 111 222111
Q ss_pred hhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCeEEEecCcEEccCEEEEcCCCCCC
Q 035488 250 LGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGKVELVNGQVLEIDSVVLATGYRSN 327 (408)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~~g~~~~~D~vi~atG~~~~ 327 (408)
.+.+++.+|+++.+ +.+++++.+.+.+|+++++|.||+|+|++|+
T Consensus 194 ---------------------------------~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 194 ---------------------------------ARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp ---------------------------------HHHHHHTTCEEEESCCEEEEETTEEEETTSCEEECSEEEECSCEEEC
T ss_pred ---------------------------------HHHHHHcCcEEEeCCEEEEEECCEEEECCCCEEEcCEEEECcCCCcc
Confidence 23344567888776 7788755788889999999999999999999
Q ss_pred CCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC-------------ccchhhHHHHHHHHHHH
Q 035488 328 VPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRGL-------------SGASLDAMSVALDIAKS 385 (408)
Q Consensus 328 ~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~-------------~~a~~~a~~~a~~i~~~ 385 (408)
+ .+++..++..++| +.+| +..+|+.|+|||+|||+... ..|..||+.+|.+|.+.
T Consensus 241 ~-~l~~~~gl~~~~g-i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 308 (408)
T 2gqw_A 241 D-ALARAAGLACDDG-IFVD-AYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDP 308 (408)
T ss_dssp C-HHHHHHTCCBSSS-EECC-TTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCT
T ss_pred H-HHHHhCCCCCCCC-EEEC-CCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCC
Confidence 8 6777777755566 7777 46789999999999998642 15889999999999864
No 31
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=4.8e-33 Score=268.60 Aligned_cols=285 Identities=14% Similarity=0.136 Sum_probs=198.1
Q ss_pred CCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
+||+|||||++|++||..|++. |.+|+|||+++.+|.... .+............... ....+++.++++++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~gi~~ 75 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSG-----GLSAYFNHTINELHEAR--YITEEELRRQKIQL 75 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC---------------------C--CCCHHHHHHTTEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCc-----cchhhhcCCCCCHHHhh--cCCHHHHHHCCCEE
Confidence 4899999999999999999999 899999999987761100 00000000000000000 01112234668888
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCC-----
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGA----- 172 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~----- 172 (408)
+++++|++++... +.+.++... . ...+.||+||+||| +.|..|++||.+. ..+++...+.+..
T Consensus 76 ~~~~~V~~id~~~--~~v~v~~~~---~---~~~~~~d~lviAtG--~~p~~p~i~g~~~--~~v~~~~~~~~~~~~~~~ 143 (452)
T 3oc4_A 76 LLNREVVAMDVEN--QLIAWTRKE---E---QQWYSYDKLILATG--ASQFSTQIRGSQT--EKLLKYKFLSGALAAVPL 143 (452)
T ss_dssp ECSCEEEEEETTT--TEEEEEETT---E---EEEEECSEEEECCC--CCBCCCCCBTTTC--TTEEEGGGCC----CCHH
T ss_pred EECCEEEEEECCC--CEEEEEecC---c---eEEEEcCEEEECCC--cccCCCCCCCCCC--CCEEEeCCHHHHHHHHHH
Confidence 8999999998776 665554111 1 16899999999999 7888889998764 2334443332221
Q ss_pred CCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecc-cccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhh
Q 035488 173 SYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPR-EVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILG 251 (408)
Q Consensus 173 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (408)
...+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .+++. .+. ++...
T Consensus 144 ~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~d~-----~~~~~----------------------- 194 (452)
T 3oc4_A 144 LENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE-NLLPKYFDK-----EMVAE----------------------- 194 (452)
T ss_dssp HHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTCCH-----HHHHH-----------------------
T ss_pred HhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC-ccccccCCH-----HHHHH-----------------------
Confidence 2357999999999999999999999999999999988 55553 222 22221
Q ss_pred hhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEe--CCe--EEEecCcEEccCEEEEcCCCC
Q 035488 252 NVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFS--PGK--VELVNGQVLEIDSVVLATGYR 325 (408)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~--~~~--v~~~~g~~~~~D~vi~atG~~ 325 (408)
+.+.+++.+|+++.+ +++++ +++ +.+.++ ++++|.||+|+|++
T Consensus 195 ------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 195 ------------------------------VQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp ------------------------------HHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCB
T ss_pred ------------------------------HHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCC
Confidence 133445668888876 77776 333 555555 89999999999999
Q ss_pred CCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC-----------c--cchhhHHHHHHHHHHH
Q 035488 326 SNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRGL-----------S--GASLDAMSVALDIAKS 385 (408)
Q Consensus 326 ~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~-----------~--~a~~~a~~~a~~i~~~ 385 (408)
|++ .+++.....+.+|++.+| +.++|+.|+|||+|||+... . .|..||+.+|.+|.+.
T Consensus 244 p~~-~~l~~~~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~ 314 (452)
T 3oc4_A 244 PQL-AYLDKKIQRNLDQTIAVD-AYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEK 314 (452)
T ss_dssp CCC-SSCCTTSCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSC
T ss_pred CCh-HHHHhhhccCCCCCEEEC-cCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCC
Confidence 998 566554225678999998 57889999999999998642 1 5889999999998764
No 32
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=9.8e-34 Score=275.04 Aligned_cols=291 Identities=15% Similarity=0.235 Sum_probs=191.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCC-C----CCCCCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNF-P----FPEDFPRVPH 91 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~ 91 (408)
+++|+|||||++|+++|..|++. |.+|+|||+++.++ |.....+. .....+...... + .......+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~gl~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 77 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGCGIPY---YVSGEVSNIESLQATPYNVVRDPEFFRI 77 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccccccch---hhcCCCCchHHhccccchhccCHHHHhh
Confidence 46899999999999999999999 89999999998764 11100000 000000000000 0 1111122233
Q ss_pred ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCC
Q 035488 92 QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSG 171 (408)
Q Consensus 92 ~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~ 171 (408)
+.+++++++++|+.++... +.+.+.... ++. ...+.||+||+||| +.|..|++||.+. ..+.+.....+.
T Consensus 78 ~~gi~~~~~~~V~~id~~~--~~v~~~~~~-~g~---~~~~~~d~lviAtG--~~p~~p~i~G~~~--~~v~~~~~~~~~ 147 (472)
T 3iwa_A 78 NKDVEALVETRAHAIDRAA--HTVEIENLR-TGE---RRTLKYDKLVLALG--SKANRPPVEGMDL--AGVTPVTNLDEA 147 (472)
T ss_dssp ---CEEECSEEEEEEETTT--TEEEEEETT-TCC---EEEEECSEEEECCC--EEECCCSCTTTTS--BTEEECCSHHHH
T ss_pred hcCcEEEECCEEEEEECCC--CEEEEeecC-CCC---EEEEECCEEEEeCC--CCcCCCCCCCCCC--CCEEEeCCHHHH
Confidence 5688888999999998766 554343311 111 15899999999999 7888888888752 122332221111
Q ss_pred -------CCCCCCeEEEEccCCcHHHHHHHHhcc-CCccEEEEecCceeec-ccccCCchHHHHHHHHhhcchHHHHHHH
Q 035488 172 -------ASYRGKRVLVVGCGNSGMEVSLDLCNH-NAKPSMVVRSSVHVLP-REVLGKSTFQLAVLMMKYFPLWLVDKIL 242 (408)
Q Consensus 172 -------~~~~~~~v~VvG~G~~a~e~a~~l~~~-g~~V~~~~r~~~~~~p-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (408)
....+++++|||+|.+|+|+|..+... |.+|+++.+.+ .++| ..+. ++...+
T Consensus 148 ~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~-~~l~~~~~~-----~~~~~l------------- 208 (472)
T 3iwa_A 148 EFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD-QIMPGFTSK-----SLSQML------------- 208 (472)
T ss_dssp HHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS-SSSTTTSCH-----HHHHHH-------------
T ss_pred HHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC-cccccccCH-----HHHHHH-------------
Confidence 113578999999999999999999999 99999999988 5555 2222 222211
Q ss_pred HHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC-C-e--EEEecCcEEccC
Q 035488 243 LILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP-G-K--VELVNGQVLEID 316 (408)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~-~-~--v~~~~g~~~~~D 316 (408)
.+.+++.+|+++.+ +.+++. + . +.+.+|+++++|
T Consensus 209 ----------------------------------------~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD 248 (472)
T 3iwa_A 209 ----------------------------------------RHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDAD 248 (472)
T ss_dssp ----------------------------------------HHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECS
T ss_pred ----------------------------------------HHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcC
Confidence 23345567888876 777765 2 2 677899999999
Q ss_pred EEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccc-------c------CccchhhHHHHHHHH
Q 035488 317 SVVLATGYRSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKR-------G------LSGASLDAMSVALDI 382 (408)
Q Consensus 317 ~vi~atG~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~-------~------~~~a~~~a~~~a~~i 382 (408)
.||+|+|++|+. .+++..++ .+.+|++.+| +.++|+.|+|||+|||+. . ...|..||+.+|.+|
T Consensus 249 ~Vv~a~G~~p~~-~l~~~~gl~~~~~g~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i 326 (472)
T 3iwa_A 249 LVILAAGVSPNT-QLARDAGLELDPRGAIIVD-TRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNL 326 (472)
T ss_dssp EEEECSCEEECC-HHHHHHTCCBCTTCCEECC-TTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHH
T ss_pred EEEECCCCCcCH-HHHHhCCccCCCCCCEEEC-CCcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHh
Confidence 999999999998 57776676 5678999988 578899999999999973 2 125889999999999
Q ss_pred HHH
Q 035488 383 AKS 385 (408)
Q Consensus 383 ~~~ 385 (408)
.+.
T Consensus 327 ~g~ 329 (472)
T 3iwa_A 327 ADG 329 (472)
T ss_dssp TTC
T ss_pred cCC
Confidence 864
No 33
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.5e-33 Score=276.10 Aligned_cols=286 Identities=18% Similarity=0.250 Sum_probs=207.7
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCC---CCCCCCCCCCccC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFP---FPEDFPRVPHQFD 94 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 94 (408)
..+||+||||||+|+++|..|++.|++|+|+|+ .+||.|.... .. . .+...+... +...+..++.+++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~--~~----~-~~~~~~~~~~~~l~~~l~~~~~~~g 281 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTV--DI----E-NYISVPKTEGQKLAGALKAHVSDYD 281 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCS--CB----C-CBTTBSSBCHHHHHHHHHHHHHTSC
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccc--cc----c-ccCCCCCCCHHHHHHHHHHHHHHcC
Confidence 367999999999999999999999999999986 5788775321 00 0 000000000 0000111223668
Q ss_pred ccccccceeEEEEEcCC-CCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCC
Q 035488 95 INPRFNETVQSAKYDET-FGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGAS 173 (408)
Q Consensus 95 ~~~~~~~~V~~i~~~~~-~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~ 173 (408)
++++.+++|+.++.... .+.|.|++.++ ..+.||+||+||| ..+..|.+||...+.+..++.+..++...
T Consensus 282 v~v~~~~~v~~i~~~~~~~~~~~V~~~~g-------~~~~~d~vVlAtG--~~~~~~~ipG~~~~~~~~v~~~~~~~~~~ 352 (521)
T 1hyu_A 282 VDVIDSQSASKLVPAATEGGLHQIETASG-------AVLKARSIIIATG--AKWRNMNVPGEDQYRTKGVTYCPHCDGPL 352 (521)
T ss_dssp EEEECSCCEEEEECCSSTTSCEEEEETTS-------CEEEEEEEEECCC--EEECCCCCTTTTTTTTTTEECCTTCCGGG
T ss_pred CEEEcCCEEEEEEeccCCCceEEEEECCC-------CEEEcCEEEECCC--CCcCCCCCCChhhhcCceEEEeecCchhh
Confidence 88999999999986431 24677887654 5899999999999 56677788887765444455555554445
Q ss_pred CCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhh
Q 035488 174 YRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNV 253 (408)
Q Consensus 174 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (408)
+.+++|+|||+|.+|+|+|..|+..|.+|+++.|.+. +.+..
T Consensus 353 ~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~-l~~~~------------------------------------- 394 (521)
T 1hyu_A 353 FKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE-MKADQ------------------------------------- 394 (521)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS-CCSCH-------------------------------------
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc-cCcCH-------------------------------------
Confidence 6789999999999999999999999999999998872 22100
Q ss_pred hhcCCCCCCCCCcccccCCCCCcccChhhhhhhcc-CCeEEecC--ccEEeCC-----eEEEec---Cc--EEccCEEEE
Q 035488 254 EKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRS-GDIKVVPG--IKKFSPG-----KVELVN---GQ--VLEIDSVVL 320 (408)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--i~~~~~~-----~v~~~~---g~--~~~~D~vi~ 320 (408)
...+.+.+ .+|+++.+ ++++.++ ++.+.+ |+ .+++|.|++
T Consensus 395 ---------------------------~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~ 447 (521)
T 1hyu_A 395 ---------------------------VLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFV 447 (521)
T ss_dssp ---------------------------HHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred ---------------------------HHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEE
Confidence 01122333 57888877 7777653 355654 53 689999999
Q ss_pred cCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc----cchhhHHHHHHHHHHHhhHH
Q 035488 321 ATGYRSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS----GASLDAMSVALDIAKSWKEE 389 (408)
Q Consensus 321 atG~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~----~a~~~a~~~a~~i~~~~~~~ 389 (408)
++|+.|++ .+++.. + .+.+|++.+| +..+|+.|+|||+|||+..+. .|+.+|+.+|.+|...+.+.
T Consensus 448 a~G~~pn~-~~l~~~-l~~~~~G~I~Vd-~~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~L~~~ 518 (521)
T 1hyu_A 448 QIGLLPNT-HWLEGA-LERNRMGEIIID-AKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRT 518 (521)
T ss_dssp CCCEEESC-GGGTTT-SCBCTTSCBCCC-TTCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCc-hHHhhh-hccCCCCcEEeC-CCCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHHHHHhh
Confidence 99999998 676653 4 5678999988 567899999999999987542 78999999999999988764
No 34
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.7e-35 Score=272.36 Aligned_cols=275 Identities=18% Similarity=0.178 Sum_probs=195.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccC-CCCCCCCCCCCCCCccCccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQL-PNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 97 (408)
..||+||||||||++||..|++.| +|+|||+++.++ |....+. ..+... ..........+++.+.++++
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~-------~~~~~l~--~~~~g~~~~~~~~~~~~~~~~~~~v~~ 77 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY-------YSKPMLS--HYIAGFIPRNRLFPYSLDWYRKRGIEI 77 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC-------CCSTTHH--HHHTTSSCGGGGCSSCHHHHHHHTEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc-------cccchhH--HHHhCCCCHHHhccCCHHHHHhCCcEE
Confidence 468999999999999999999999 999999988643 1110000 000000 00000001122334668888
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCCC---
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGASY--- 174 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~--- 174 (408)
+.+++|+.++... +.|+ .++ .++.||+|||||| +.|..|++||.+ .+++.....+....
T Consensus 78 ~~g~~v~~id~~~----~~V~-~~g-------~~~~~d~lViATG--s~p~~p~i~G~~----~v~~~~~~~~~~~l~~~ 139 (367)
T 1xhc_A 78 RLAEEAKLIDRGR----KVVI-TEK-------GEVPYDTLVLATG--ARAREPQIKGKE----YLLTLRTIFDADRIKES 139 (367)
T ss_dssp ECSCCEEEEETTT----TEEE-ESS-------CEEECSEEEECCC--EEECCCCSBTGG----GEECCCSHHHHHHHHHH
T ss_pred EECCEEEEEECCC----CEEE-ECC-------cEEECCEEEECCC--CCCCCCCCCCcC----CEEEEcCHHHHHHHHHH
Confidence 8888999998654 3366 443 5799999999999 788888888832 23333222221111
Q ss_pred --CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhh
Q 035488 175 --RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGN 252 (408)
Q Consensus 175 --~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (408)
++++++|||+|.+|+|+|..|.+.|.+|+++++.+ +++| .+. ++...
T Consensus 140 ~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~~-----~~~~~------------------------ 188 (367)
T 1xhc_A 140 IENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA-MFLG-LDE-----ELSNM------------------------ 188 (367)
T ss_dssp HHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS-CCTT-CCH-----HHHHH------------------------
T ss_pred hhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-eecc-CCH-----HHHHH------------------------
Confidence 35899999999999999999999999999999988 5555 221 22211
Q ss_pred hhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCeEEEecCcEEccCEEEEcCCCCCCCCC
Q 035488 253 VEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGKVELVNGQVLEIDSVVLATGYRSNVPS 330 (408)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~ 330 (408)
..+.+++.+|+++.+ +++++.+.+.+.+|+ +++|.||+|+|++|++ .
T Consensus 189 -----------------------------l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~-i~~D~vi~a~G~~p~~-~ 237 (367)
T 1xhc_A 189 -----------------------------IKDMLEETGVKFFLNSELLEANEEGVLTNSGF-IEGKVKICAIGIVPNV-D 237 (367)
T ss_dssp -----------------------------HHHHHHHTTEEEECSCCEEEECSSEEEETTEE-EECSCEEEECCEEECC-H
T ss_pred -----------------------------HHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE-EEcCEEEECcCCCcCH-H
Confidence 123345568888887 888887788888888 9999999999999998 5
Q ss_pred cccccccccCCCCCCCCCCCCCCCCCceEEEeecccc----C---ccchhhHHHHHHHHHHH
Q 035488 331 WLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRG----L---SGASLDAMSVALDIAKS 385 (408)
Q Consensus 331 l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~----~---~~a~~~a~~~a~~i~~~ 385 (408)
+++..++..++| +.+| +.++|+.|+|||+|||+.. + ..|..||+.+|.+|.+.
T Consensus 238 ll~~~gl~~~~g-i~Vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 297 (367)
T 1xhc_A 238 LARRSGIHTGRG-ILID-DNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE 297 (367)
T ss_dssp HHHHTTCCBSSS-EECC-TTSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred HHHhCCCCCCCC-EEEC-CCcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCC
Confidence 777777755556 6677 5778999999999999742 1 26889999999999753
No 35
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.6e-33 Score=274.37 Aligned_cols=287 Identities=20% Similarity=0.232 Sum_probs=198.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcC---CCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQG---VPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDI 95 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g---~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (408)
.+||+|||||++|+++|..|++.| .+|+|||+++.++..+.. +............... ....+++.+.++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~~~~~~gv 107 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-----MALWIGEQIAGPEGLF--YSDKEELESLGA 107 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-----HHHHHTTSSSCSGGGB--SCCHHHHHHTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-----cchhhcCccCCHHHhh--hcCHHHHHhCCC
Confidence 479999999999999999999998 999999998866522110 0000000000000000 011122335678
Q ss_pred cccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCC------Ccc---eeeeecc
Q 035488 96 NPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQ------HFE---GNVMHAG 166 (408)
Q Consensus 96 ~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~------~~~---~~~~~~~ 166 (408)
+++++++|+.++... +.+.+.. ++ .. .++.||+||+||| +.|..|++||.+ .|. ..+++..
T Consensus 108 ~v~~~~~v~~i~~~~--~~v~v~~-~g--~~---~~~~~d~lviAtG--~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~ 177 (490)
T 2bc0_A 108 KVYMESPVQSIDYDA--KTVTALV-DG--KN---HVETYDKLIFATG--SQPILPPIKGAEIKEGSLEFEATLENLQFVK 177 (490)
T ss_dssp EEETTCCEEEEETTT--TEEEEEE-TT--EE---EEEECSEEEECCC--EEECCCSCBTCCBCTTCTTCCBSSTTEEECS
T ss_pred EEEeCCEEEEEECCC--CEEEEEe-CC--cE---EEEECCEEEECCC--CCcCCCCCCCccccccccccccccCCEEEeC
Confidence 888899999998765 5543331 21 11 5799999999999 778888888876 221 1234432
Q ss_pred CCCCC-------CCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecc-cccCCchHHHHHHHHhhcchHHH
Q 035488 167 DYKSG-------ASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPR-EVLGKSTFQLAVLMMKYFPLWLV 238 (408)
Q Consensus 167 ~~~~~-------~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~-~~~~~~~~~~~~~~~~~l~~~~~ 238 (408)
.+.+. ....+++++|||+|.+|+|+|..|++.|.+|+++++.+ ++++. .+. ++...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~-----~~~~~---------- 241 (490)
T 2bc0_A 178 LYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD-TCLAGYYDR-----DLTDL---------- 241 (490)
T ss_dssp SHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSCH-----HHHHH----------
T ss_pred CHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc-chhhhHHHH-----HHHHH----------
Confidence 22111 11468999999999999999999999999999999988 45442 221 22211
Q ss_pred HHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCe----EEEecCcE
Q 035488 239 DKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGK----VELVNGQV 312 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~----v~~~~g~~ 312 (408)
..+.+++.+|+++.+ +++++.++ +.+ ++++
T Consensus 242 -------------------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~ 277 (490)
T 2bc0_A 242 -------------------------------------------MAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNE 277 (490)
T ss_dssp -------------------------------------------HHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCE
T ss_pred -------------------------------------------HHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcE
Confidence 123345567888776 77776543 443 7889
Q ss_pred EccCEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC-------------ccchhhHHHH
Q 035488 313 LEIDSVVLATGYRSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGL-------------SGASLDAMSV 378 (408)
Q Consensus 313 ~~~D~vi~atG~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~-------------~~a~~~a~~~ 378 (408)
+++|.||+|+|++|++ .+++.. + .+.+|++.+| +.++|+.|+|||+|||+... ..|..||+.+
T Consensus 278 i~~D~Vi~a~G~~p~~-~ll~~~-l~~~~~G~I~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~a 354 (490)
T 2bc0_A 278 YDVDMVILAVGFRPNT-TLGNGK-IDLFRNGAFLVN-KRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVA 354 (490)
T ss_dssp EECSEEEECCCEEECC-GGGTTC-SCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHH
T ss_pred EECCEEEECCCCCcCh-HHHHhh-hccCCCCCEEEC-CCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHH
Confidence 9999999999999998 566665 5 4678999998 56889999999999998631 1688999999
Q ss_pred HHHHHHH
Q 035488 379 ALDIAKS 385 (408)
Q Consensus 379 a~~i~~~ 385 (408)
|.+|.+.
T Consensus 355 a~~i~g~ 361 (490)
T 2bc0_A 355 AHNACGT 361 (490)
T ss_dssp HHHHTTC
T ss_pred HHHhcCC
Confidence 9999753
No 36
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=7.8e-34 Score=282.14 Aligned_cols=286 Identities=19% Similarity=0.225 Sum_probs=197.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCC----CCCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPR----VPHQ 92 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 92 (408)
|++|+|||||+||++||..|++. +++|+|||+++.++ |....+. ...... .......+.. +..+
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~-------~~~~~l~--~~~~~~-~~~~~~~~~~~~~~~~~~ 70 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS-------FANCGLP--YHISGE-IAQRSALVLQTPESFKAR 70 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGHH--HHHTSS-SCCGGGGBCCCHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccccCch--HHhcCC-cCChHHhhccCHHHHHHh
Confidence 35899999999999999999998 78999999998765 2211100 000000 0000001111 1224
Q ss_pred cCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCC-
Q 035488 93 FDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSG- 171 (408)
Q Consensus 93 ~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~- 171 (408)
++++++++++|++++... +.+ ++.+...++ ..++.||+||+||| +.|..|++||.+... +.+.....+.
T Consensus 71 ~~i~~~~~~~V~~id~~~--~~v--~~~~~~~g~--~~~~~~d~lviAtG--~~p~~p~ipG~~~~~--v~~~~~~~~~~ 140 (565)
T 3ntd_A 71 FNVEVRVKHEVVAIDRAA--KLV--TVRRLLDGS--EYQESYDTLLLSPG--AAPIVPPIPGVDNPL--THSLRNIPDMD 140 (565)
T ss_dssp HCCEEETTEEEEEEETTT--TEE--EEEETTTCC--EEEEECSEEEECCC--EEECCCCCTTCCSTT--EECCSSHHHHH
T ss_pred cCcEEEECCEEEEEECCC--CEE--EEEecCCCC--eEEEECCEEEECCC--CCCCCCCCCCCCCCC--EEEeCCHHHHH
Confidence 688888999999998766 554 443311111 15899999999999 688888999875422 2222211111
Q ss_pred ------CCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHH
Q 035488 172 ------ASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLIL 245 (408)
Q Consensus 172 ------~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (408)
....+++++|||+|.+|+|+|..|.+.|.+|+++++.+ +++|..+. ++...+.
T Consensus 141 ~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~l~--------------- 199 (565)
T 3ntd_A 141 RILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD-QVMTPVDR-----EMAGFAH--------------- 199 (565)
T ss_dssp HHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSCTTSCH-----HHHHHHH---------------
T ss_pred HHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC-ccchhcCH-----HHHHHHH---------------
Confidence 11357899999999999999999999999999999998 56564332 2222221
Q ss_pred HHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC---------------------
Q 035488 246 ARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP--------------------- 302 (408)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--------------------- 302 (408)
+.+++.+|+++.+ +.+++.
T Consensus 200 --------------------------------------~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 241 (565)
T 3ntd_A 200 --------------------------------------QAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK 241 (565)
T ss_dssp --------------------------------------HHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT
T ss_pred --------------------------------------HHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCC
Confidence 2234456666655 555543
Q ss_pred C--eEEEecCcEEccCEEEEcCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccc-------cC----
Q 035488 303 G--KVELVNGQVLEIDSVVLATGYRSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKR-------GL---- 368 (408)
Q Consensus 303 ~--~v~~~~g~~~~~D~vi~atG~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~-------~~---- 368 (408)
+ .+.+.+|+++++|.||+|+|++|++ .+++..++ .+.+|++.+| +.++|+.|+|||+|||+. ..
T Consensus 242 ~~~~v~~~~g~~i~~D~vi~a~G~~p~~-~l~~~~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~ 319 (565)
T 3ntd_A 242 GHLSLTLSNGELLETDLLIMAIGVRPET-QLARDAGLAIGELGGIKVN-AMMQTSDPAIYAVGDAVEEQDFVTGQACLVP 319 (565)
T ss_dssp CEEEEEETTSCEEEESEEEECSCEEECC-HHHHHHTCCBCTTSSBCCC-TTCBCSSTTEEECGGGBCEEBTTTCCEECCC
T ss_pred CcEEEEEcCCCEEEcCEEEECcCCccch-HHHHhCCcccCCCCCEEEC-CCcccCCCCEEEeeeeEeeccccCCceeecc
Confidence 1 2566788899999999999999998 57776676 5678999998 578899999999999973 21
Q ss_pred --ccchhhHHHHHHHHHHH
Q 035488 369 --SGASLDAMSVALDIAKS 385 (408)
Q Consensus 369 --~~a~~~a~~~a~~i~~~ 385 (408)
..|..||+.+|.+|.+.
T Consensus 320 ~~~~A~~~g~~aa~~i~g~ 338 (565)
T 3ntd_A 320 LAGPANRQGRMAADNMFGR 338 (565)
T ss_dssp CHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHhcCC
Confidence 15789999999999864
No 37
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.1e-33 Score=271.01 Aligned_cols=283 Identities=20% Similarity=0.259 Sum_probs=193.9
Q ss_pred ccCCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCC-CCCCCCCCCC-Ccc
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNF-PFPEDFPRVP-HQF 93 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~ 93 (408)
.+++|+|||||++|+++|..|++. +.+|+|||+.+.++.... ..+..+...... .......+.. .+.
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~---------~~p~~~~~~~~~~~~~~~~~~~~~~~~ 72 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC---------GIPYVVEGLSTPDKLMYYPPEVFIKKR 72 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---------------------------------CTHHHHT
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc---------CCccccCCCCCHHHhhhcCHHHHHHhc
Confidence 357899999999999999999998 789999999986652110 001000000000 0000111222 467
Q ss_pred CccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCC---
Q 035488 94 DINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKS--- 170 (408)
Q Consensus 94 ~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~--- 170 (408)
+++++++++|+.++.. .+.|++.++ ...+.||+||+||| +.|..|.+||.+.. .++......+
T Consensus 73 gi~v~~~~~v~~i~~~----~~~v~~~~g------~~~~~~d~lviAtG--~~p~~p~i~G~~~~--~v~~~~~~~~~~~ 138 (449)
T 3kd9_A 73 GIDLHLNAEVIEVDTG----YVRVRENGG------EKSYEWDYLVFANG--ASPQVPAIEGVNLK--GVFTADLPPDALA 138 (449)
T ss_dssp TCEEETTCEEEEECSS----EEEEECSSS------EEEEECSEEEECCC--EEECCCSCBTTTST--TEECSCSTHHHHH
T ss_pred CcEEEecCEEEEEecC----CCEEEECCc------eEEEEcCEEEECCC--CCCCCCCCCCCCCC--CEEEeCCHHHHHH
Confidence 8899999999988643 344654332 14899999999999 77888888887532 1222211111
Q ss_pred ----CCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecc-cccCCchHHHHHHHHhhcchHHHHHHHHHH
Q 035488 171 ----GASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPR-EVLGKSTFQLAVLMMKYFPLWLVDKILLIL 245 (408)
Q Consensus 171 ----~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (408)
.....+++++|||+|.+|+|+|..|.+.|.+|+++++.+ ++++. .+. ++...+
T Consensus 139 ~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~-----~~~~~l---------------- 196 (449)
T 3kd9_A 139 IREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE-RVLRRSFDK-----EVTDIL---------------- 196 (449)
T ss_dssp HHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSCH-----HHHHHH----------------
T ss_pred HHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcCH-----HHHHHH----------------
Confidence 012367899999999999999999999999999999988 45554 222 222211
Q ss_pred HHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCe---EEEecCcEEccCEEEE
Q 035488 246 ARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGK---VELVNGQVLEIDSVVL 320 (408)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~---v~~~~g~~~~~D~vi~ 320 (408)
.+.+++. |+++.+ +.+++++. ..+.+++++++|.||+
T Consensus 197 -------------------------------------~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv~ 238 (449)
T 3kd9_A 197 -------------------------------------EEKLKKH-VNLRLQEITMKIEGEERVEKVVTDAGEYKAELVIL 238 (449)
T ss_dssp -------------------------------------HHHHTTT-SEEEESCCEEEEECSSSCCEEEETTEEEECSEEEE
T ss_pred -------------------------------------HHHHHhC-cEEEeCCeEEEEeccCcEEEEEeCCCEEECCEEEE
Confidence 2233444 666655 66776543 3467888999999999
Q ss_pred cCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccc-------c---C---ccchhhHHHHHHHHHHH
Q 035488 321 ATGYRSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKR-------G---L---SGASLDAMSVALDIAKS 385 (408)
Q Consensus 321 atG~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~-------~---~---~~a~~~a~~~a~~i~~~ 385 (408)
|+|++|++ .+++..++ .+.+|++.+| +.++|+.|+|||+|||+. . + ..|..||+.+|.+|.+.
T Consensus 239 a~G~~p~~-~l~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~ 315 (449)
T 3kd9_A 239 ATGIKPNI-ELAKQLGVRIGETGAIWTN-EKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGK 315 (449)
T ss_dssp CSCEEECC-HHHHHTTCCBCTTSSBCCC-TTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred eeCCccCH-HHHHhCCccCCCCCCEEEC-CCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCC
Confidence 99999998 67777777 5678899998 578899999999999973 1 1 16889999999999864
No 38
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1.4e-33 Score=281.24 Aligned_cols=291 Identities=19% Similarity=0.280 Sum_probs=205.7
Q ss_pred ccccCCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCccCCCCCCCeeee--cCCccccCCCCCCCCCCCCCCC
Q 035488 16 CIWVNGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCIASLWQNRTYDRLKLH--LPKQFCQLPNFPFPEDFPRVPH 91 (408)
Q Consensus 16 ~~~~~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~gg~w~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 91 (408)
.|.+++|+|||||++|++||..|++. |.+|+|||+++.++ |....+. ....+.. +...+...+..+..
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-------~~~~~lp~~~~g~~~~-~~~~~~~~~~~~~~ 104 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-------FANCGLPYYIGGVITE-RQKLLVQTVERMSK 104 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGHHHHHTTSSCC-GGGGBSSCHHHHHH
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccCCCCchhhcCcCCC-hHHhhccCHHHHHH
Confidence 34578999999999999999999999 89999999998765 2211100 0000000 00000001112223
Q ss_pred ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCC
Q 035488 92 QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSG 171 (408)
Q Consensus 92 ~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~ 171 (408)
+++++++++++|+.++... +.+.+..... +. ...+.||+||+||| +.|..|.+||..... .+++.....+.
T Consensus 105 ~~gi~v~~~~~V~~id~~~--~~v~v~~~~~-g~---~~~~~~d~lviAtG--~~p~~p~i~G~~~~~-~v~~~~~~~~~ 175 (588)
T 3ics_A 105 RFNLDIRVLSEVVKINKEE--KTITIKNVTT-NE---TYNEAYDVLILSPG--AKPIVPSIPGIEEAK-ALFTLRNVPDT 175 (588)
T ss_dssp HTTCEEECSEEEEEEETTT--TEEEEEETTT-CC---EEEEECSEEEECCC--EEECCCCCTTTTTCT-TEEECSSHHHH
T ss_pred hcCcEEEECCEEEEEECCC--CEEEEeecCC-CC---EEEEeCCEEEECCC--CCCCCCCCCCcccCC-CeEEeCCHHHH
Confidence 6688888999999998766 5544433111 11 14789999999999 788888899873322 23333222211
Q ss_pred C-------CCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHH
Q 035488 172 A-------SYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLI 244 (408)
Q Consensus 172 ~-------~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 244 (408)
. ...+++++|||+|.+|+|+|..+...|.+|+++.+.+ +++|..+. ++...+
T Consensus 176 ~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~l--------------- 234 (588)
T 3ics_A 176 DRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN-QVMPPIDY-----EMAAYV--------------- 234 (588)
T ss_dssp HHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH-----HHHHHH---------------
T ss_pred HHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-cccccCCH-----HHHHHH---------------
Confidence 1 1368999999999999999999999999999999988 56554332 222222
Q ss_pred HHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC--CeEEEecCcEEccCEEEE
Q 035488 245 LARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP--GKVELVNGQVLEIDSVVL 320 (408)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--~~v~~~~g~~~~~D~vi~ 320 (408)
.+.+++.+|+++.+ +.+++. +.+.+.+|+++++|.||+
T Consensus 235 --------------------------------------~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~ 276 (588)
T 3ics_A 235 --------------------------------------HEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLIL 276 (588)
T ss_dssp --------------------------------------HHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEE
T ss_pred --------------------------------------HHHHHHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEE
Confidence 23345567888876 778876 568889999999999999
Q ss_pred cCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccc-------c---Cc---cchhhHHHHHHHHHH
Q 035488 321 ATGYRSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKR-------G---LS---GASLDAMSVALDIAK 384 (408)
Q Consensus 321 atG~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~-------~---~~---~a~~~a~~~a~~i~~ 384 (408)
|+|++|++ .+++..++ .+.+|++.+| +.++|+.|+|||+|||+. . +. .|..||+.+|.+|.+
T Consensus 277 a~G~~p~~-~~l~~~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 277 AIGVQPES-SLAKGAGLALGVRGTIKVN-EKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp CSCEEECC-HHHHHTTCCBCGGGCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCh-HHHHhcCceEcCCCCEEEC-CccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 99999998 67777777 5678999998 578899999999999983 1 11 578999999999986
No 39
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=6.3e-34 Score=270.88 Aligned_cols=280 Identities=19% Similarity=0.180 Sum_probs=197.1
Q ss_pred CCcEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCCccCCCCCCCeeeecCCccccCC--CCCCCCCCCCCCCccCc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGV--PFIILERANCIASLWQNRTYDRLKLHLPKQFCQLP--NFPFPEDFPRVPHQFDI 95 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~--~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 95 (408)
++|+|||||++|+++|..|++.|+ +|+|||+++.++ |....+ .+.+.... ..........+..+.++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~-------y~~~~l--~~~~l~~~~~~~~~~~~~~~~~~~~~i 72 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLP-------YQRPPL--SKAYLKSGGDPNSLMFRPEKFFQDQAI 72 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSS-------BCSGGG--GTGGGGSCCCTTSSBSSCHHHHHHTTE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCC-------CCCccC--CHHHHCCCCCHHHccCCCHHHHHhCCC
Confidence 589999999999999999999998 899999998654 221111 11111100 00000011122335678
Q ss_pred cccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCC-----
Q 035488 96 NPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKS----- 170 (408)
Q Consensus 96 ~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~----- 170 (408)
+++. ++|+.++... +. |++.++ ..+.||+||+||| +.|..|++||.+.. .+++.....+
T Consensus 73 ~~~~-~~v~~id~~~--~~--v~~~~g-------~~~~~d~lvlAtG--~~p~~~~i~g~~~~--~v~~~~~~~d~~~l~ 136 (404)
T 3fg2_P 73 ELIS-DRMVSIDREG--RK--LLLASG-------TAIEYGHLVLATG--ARNRMLDVPNASLP--DVLYLRTLDESEVLR 136 (404)
T ss_dssp EEEC-CCEEEEETTT--TE--EEESSS-------CEEECSEEEECCC--EEECCCCSTTTTST--TEECCSSHHHHHHHH
T ss_pred EEEE-EEEEEEECCC--CE--EEECCC-------CEEECCEEEEeeC--CCccCCCCCCCCCC--cEEEECCHHHHHHHH
Confidence 8887 8999998665 43 777664 5899999999999 67888888886531 1222111111
Q ss_pred CCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHh
Q 035488 171 GASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLIL 250 (408)
Q Consensus 171 ~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 250 (408)
.....+++++|||+|.+|+|+|..+...|.+|+++.+.+ .+++.... .++...
T Consensus 137 ~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~~~~~~~----~~~~~~---------------------- 189 (404)
T 3fg2_P 137 QRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP-RVMARVVT----PEISSY---------------------- 189 (404)
T ss_dssp HHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTTTSC----HHHHHH----------------------
T ss_pred HHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-cchhhccC----HHHHHH----------------------
Confidence 112357899999999999999999999999999999988 44332211 011111
Q ss_pred hhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC-----eEEEecCcEEccCEEEEcCC
Q 035488 251 GNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG-----KVELVNGQVLEIDSVVLATG 323 (408)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-----~v~~~~g~~~~~D~vi~atG 323 (408)
+.+.+++.+|+++.+ +.+++.+ .+.+.+|+++++|.||+|+|
T Consensus 190 -------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G 238 (404)
T 3fg2_P 190 -------------------------------FHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVG 238 (404)
T ss_dssp -------------------------------HHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCC
T ss_pred -------------------------------HHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcC
Confidence 123345567888876 7777653 47788999999999999999
Q ss_pred CCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC-------------ccchhhHHHHHHHHHHH
Q 035488 324 YRSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRGL-------------SGASLDAMSVALDIAKS 385 (408)
Q Consensus 324 ~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~-------------~~a~~~a~~~a~~i~~~ 385 (408)
+.|+. .+++..++..++| +.+| +..+|+.|+|||+|||+..+ ..|..||+.+|.+|.+.
T Consensus 239 ~~p~~-~l~~~~gl~~~~G-i~vd-~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 310 (404)
T 3fg2_P 239 VIPNV-EIAAAAGLPTAAG-IIVD-QQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGD 310 (404)
T ss_dssp EEECC-HHHHHTTCCBSSS-EEEC-TTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTC
T ss_pred CccCH-HHHHhCCCCCCCC-EEEC-CCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCC
Confidence 99998 7788777755566 7777 46779999999999997642 25788999999999764
No 40
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-33 Score=275.99 Aligned_cols=296 Identities=17% Similarity=0.185 Sum_probs=189.5
Q ss_pred ccccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeeeecC----------CccccCCCCCCCC
Q 035488 16 CIWVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKLHLP----------KQFCQLPNFPFPE 84 (408)
Q Consensus 16 ~~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~~~~----------~~~~~~~~~~~~~ 84 (408)
.|..+||+||||||+|++||..|++.|++|+|||+.+.+||+|... .++...+... ...+.........
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKL 101 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEE
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCcc
Confidence 4456899999999999999999999999999999999999976421 1111000000 0000000000000
Q ss_pred CCCC------------------CCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCC
Q 035488 85 DFPR------------------VPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAE 146 (408)
Q Consensus 85 ~~~~------------------~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~ 146 (408)
++.. +..+.++++..+... .+ +. +.+.|...+ +.. .++.||+||+|||+ .
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~-~~--~~--~~~~v~~~~--g~~---~~~~~d~lViATGs--~ 169 (491)
T 3urh_A 102 NLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGK-VL--GQ--GKVSVTNEK--GEE---QVLEAKNVVIATGS--D 169 (491)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EC--SS--SEEEEECTT--SCE---EEEECSEEEECCCE--E
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--cC--CEEEEEeCC--Cce---EEEEeCEEEEccCC--C
Confidence 1000 011234444333221 11 11 444444322 222 58999999999994 4
Q ss_pred CCCCCCCCCCC-cceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHH
Q 035488 147 KIEPEFEGLQH-FEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQL 225 (408)
Q Consensus 147 ~~~p~~~g~~~-~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~ 225 (408)
| |.+||... +.+..++.+.........+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ ++++..+. ++
T Consensus 170 p--~~ipg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~~ 241 (491)
T 3urh_A 170 V--AGIPGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD-TILGGMDG-----EV 241 (491)
T ss_dssp C--CCBTTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSSSSCH-----HH
T ss_pred C--CCCCCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc-cccccCCH-----HH
Confidence 3 35666542 2222233333333334568999999999999999999999999999999988 55554332 22
Q ss_pred HHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC-
Q 035488 226 AVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP- 302 (408)
Q Consensus 226 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~- 302 (408)
...+ .+.+++.+|+++.+ +.+++.
T Consensus 242 ~~~l-----------------------------------------------------~~~l~~~gV~v~~~~~v~~i~~~ 268 (491)
T 3urh_A 242 AKQL-----------------------------------------------------QRMLTKQGIDFKLGAKVTGAVKS 268 (491)
T ss_dssp HHHH-----------------------------------------------------HHHHHHTTCEEECSEEEEEEEEE
T ss_pred HHHH-----------------------------------------------------HHHHHhCCCEEEECCeEEEEEEe
Confidence 2221 23344567888776 666653
Q ss_pred -Ce--EEEec---C--cEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---
Q 035488 303 -GK--VELVN---G--QVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS--- 369 (408)
Q Consensus 303 -~~--v~~~~---g--~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~--- 369 (408)
+. +.+.+ | +++++|.||+|+|++|+...+ ++..++ .+.+|++.+| +.++|+.|+|||+|||++.+.
T Consensus 269 ~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~ 347 (491)
T 3urh_A 269 GDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEID-RHFQTSIAGVYAIGDVVRGPMLAH 347 (491)
T ss_dssp TTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCC-TTCBCSSTTEEECGGGSSSCCCHH
T ss_pred CCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCccchh
Confidence 22 45543 4 579999999999999998444 566666 5678999998 568899999999999996554
Q ss_pred cchhhHHHHHHHHHHH
Q 035488 370 GASLDAMSVALDIAKS 385 (408)
Q Consensus 370 ~a~~~a~~~a~~i~~~ 385 (408)
.|..||+.+|.+|.+.
T Consensus 348 ~A~~~g~~aa~~i~g~ 363 (491)
T 3urh_A 348 KAEDEGVAVAEIIAGQ 363 (491)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCC
Confidence 7889999999999864
No 41
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=8.7e-33 Score=267.70 Aligned_cols=285 Identities=16% Similarity=0.188 Sum_probs=193.2
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeeeecC----CccccCCCCCCCCC---------
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKLHLP----KQFCQLPNFPFPED--------- 85 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~~~~----~~~~~~~~~~~~~~--------- 85 (408)
+||+||||||+|+++|..|++.|++|+|||+++.+||+|... ..+...+... ..+...+......+
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKD 84 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 699999999999999999999999999999999999987531 1110000000 00000000000000
Q ss_pred ----------CCCCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCC
Q 035488 86 ----------FPRVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGL 155 (408)
Q Consensus 86 ----------~~~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~ 155 (408)
+..+..+.++++..+ ++..++. +.+.|...++ + ..++.||+||+||| +.|..|++||.
T Consensus 85 ~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~----~~~~V~~~~g---~--~~~~~~d~lviAtG--~~p~~p~i~G~ 152 (466)
T 3l8k_A 85 YVQELRFKQHKRNMSQYETLTFYKG-YVKIKDP----THVIVKTDEG---K--EIEAETRYMIIASG--AETAKLRLPGV 152 (466)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEESE-EEEEEET----TEEEEEETTS---C--EEEEEEEEEEECCC--EEECCCCCTTG
T ss_pred hheeccccchHHHHHHhCCCEEEEe-EEEEecC----CeEEEEcCCC---c--EEEEecCEEEECCC--CCccCCCCCCc
Confidence 111223446666554 5666652 4555655443 1 13399999999999 78888889987
Q ss_pred CCcceeeeeccCCC---CCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeeccc-ccCCchHHHHHHHHh
Q 035488 156 QHFEGNVMHAGDYK---SGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPRE-VLGKSTFQLAVLMMK 231 (408)
Q Consensus 156 ~~~~~~~~~~~~~~---~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~-~~~~~~~~~~~~~~~ 231 (408)
+. +.+..+.. ......+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .+++.. +. ++...+..
T Consensus 153 ~~----~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~d~-----~~~~~l~~ 222 (466)
T 3l8k_A 153 EY----CLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD-RALITLEDQ-----DIVNTLLS 222 (466)
T ss_dssp GG----SBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCCH-----HHHHHHHH
T ss_pred cc----eEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-cCCCCCCCH-----HHHHHHHh
Confidence 62 23332222 1223357999999999999999999999999999999988 555544 32 32222222
Q ss_pred hcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC---Ce--
Q 035488 232 YFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP---GK-- 304 (408)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~---~~-- 304 (408)
.+ + |+++.+ +.+++. +.
T Consensus 223 ~l-----------------------------------------------------~---v~i~~~~~v~~i~~~~~~~v~ 246 (466)
T 3l8k_A 223 IL-----------------------------------------------------K---LNIKFNSPVTEVKKIKDDEYE 246 (466)
T ss_dssp HH-----------------------------------------------------C---CCEECSCCEEEEEEEETTEEE
T ss_pred cC-----------------------------------------------------E---EEEEECCEEEEEEEcCCCcEE
Confidence 21 1 555544 566654 33
Q ss_pred EEEe--cCc--EEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---cchhhH
Q 035488 305 VELV--NGQ--VLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GASLDA 375 (408)
Q Consensus 305 v~~~--~g~--~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~~a 375 (408)
+.+. +|+ ++++|.||+|+|++|++. + ++..++ .+++| +.+| +.++|+.|+|||+|||+..+. .|..||
T Consensus 247 v~~~~~~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g 323 (466)
T 3l8k_A 247 VIYSTKDGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IVVD-ETMKTNIPNVFATGDANGLAPYYHAAVRMS 323 (466)
T ss_dssp EEECCTTSCCEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BCCC-TTCBCSSTTEEECGGGTCSCCSHHHHHHHH
T ss_pred EEEEecCCceEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-EeEC-CCccCCCCCEEEEEecCCCCccHhHHHHHH
Confidence 5555 565 799999999999999995 5 677777 56788 8888 678899999999999998544 688999
Q ss_pred HHHHHHHHHH
Q 035488 376 MSVALDIAKS 385 (408)
Q Consensus 376 ~~~a~~i~~~ 385 (408)
+.+|.+|.+.
T Consensus 324 ~~aa~~i~~~ 333 (466)
T 3l8k_A 324 IAAANNIMAN 333 (466)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhCC
Confidence 9999999864
No 42
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.98 E-value=1.3e-32 Score=269.78 Aligned_cols=287 Identities=16% Similarity=0.177 Sum_probs=199.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCC-CCCeeee-cCC---ccccCCCCC-CCCCCC-----
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRT-YDRLKLH-LPK---QFCQLPNFP-FPEDFP----- 87 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~-~~~~~~~-~~~---~~~~~~~~~-~~~~~~----- 87 (408)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|.... .+...+. ... .+...+.+. ++....
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 122 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVGI 122 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhhH
Confidence 57999999999999999999999999999999988898764211 0000000 000 000000000 110000
Q ss_pred ---------------CCC-----CccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCC
Q 035488 88 ---------------RVP-----HQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEK 147 (408)
Q Consensus 88 ---------------~~~-----~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~ 147 (408)
.++ .+.++++++..++..++. .. |++. + ..+.||+||+||| +.|
T Consensus 123 ~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~----~~--v~~~-g-------~~~~~d~lViATG--s~p 186 (523)
T 1mo9_A 123 KEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN----HT--VEAA-G-------KVFKAKNLILAVG--AGP 186 (523)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET----TE--EEET-T-------EEEEBSCEEECCC--EEC
T ss_pred HHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC----CE--EEEC-C-------EEEEeCEEEECCC--CCC
Confidence 122 344666664667776652 22 5554 2 5899999999999 788
Q ss_pred CCCCCCCCCCcceeeeeccCCC-CCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHH
Q 035488 148 IEPEFEGLQHFEGNVMHAGDYK-SGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLA 226 (408)
Q Consensus 148 ~~p~~~g~~~~~~~~~~~~~~~-~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~ 226 (408)
..|++||.+.. .+++..+.. .....++++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++|..+. ++.
T Consensus 187 ~~p~i~G~~~~--~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~-----~~~ 258 (523)
T 1mo9_A 187 GTLDVPGVNAK--GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE-PLKLIKDN-----ETR 258 (523)
T ss_dssp CCCCSTTTTSB--TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTTCCSH-----HHH
T ss_pred CCCCCCCcccC--cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC-cccccccH-----HHH
Confidence 88889887641 244544443 3333344999999999999999999999999999999988 45554322 222
Q ss_pred HHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC--
Q 035488 227 VLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP-- 302 (408)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~-- 302 (408)
..+ .+.+++.+|+++.+ +.+++.
T Consensus 259 ~~l-----------------------------------------------------~~~l~~~GV~i~~~~~V~~i~~~~ 285 (523)
T 1mo9_A 259 AYV-----------------------------------------------------LDRMKEQGMEIISGSNVTRIEEDA 285 (523)
T ss_dssp HHH-----------------------------------------------------HHHHHHTTCEEESSCEEEEEEECT
T ss_pred HHH-----------------------------------------------------HHHHHhCCcEEEECCEEEEEEEcC
Confidence 221 23344567888776 777754
Q ss_pred Ce------EEEecCc-EEccCEEEEcCCCCCCCCC-ccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---c
Q 035488 303 GK------VELVNGQ-VLEIDSVVLATGYRSNVPS-WLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---G 370 (408)
Q Consensus 303 ~~------v~~~~g~-~~~~D~vi~atG~~~~~~~-l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~ 370 (408)
++ +.+.+|+ ++++|.||+|+|++|++ . +++..++ .+.+|++.+| +.++|+.|+|||+|||++.+. .
T Consensus 286 ~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~-~~~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~~ 363 (523)
T 1mo9_A 286 NGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS-AELAKILGLDLGPKGEVLVN-EYLQTSVPNVYAVGDLIGGPMEMFK 363 (523)
T ss_dssp TSBEEEEEEEETTEEEEEECSCEEECCCCEECC-HHHHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGCSSCSHHH
T ss_pred CCceEEEEEEECCCcEEEEcCEEEECcCCccCC-ccCHHHcCCccCCCCCEEEC-CCCccCCCCEEEEeecCCCcccHHH
Confidence 33 5566777 89999999999999998 5 6777777 4568999988 577899999999999998644 6
Q ss_pred chhhHHHHHHHHHH
Q 035488 371 ASLDAMSVALDIAK 384 (408)
Q Consensus 371 a~~~a~~~a~~i~~ 384 (408)
|..||+.+|.+|.+
T Consensus 364 A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 364 ARKSGCYAARNVMG 377 (523)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC
Confidence 88999999999976
No 43
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.98 E-value=3.7e-33 Score=267.39 Aligned_cols=283 Identities=19% Similarity=0.170 Sum_probs=195.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCC--CCCCCCCCCCCccC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV--PFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNF--PFPEDFPRVPHQFD 94 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~--~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 94 (408)
.+||+|||||++|+++|..|++.|. +|+|||+++.++ |....+ .+.+...... .......+++.+.+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~g 74 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP-------HHLPPL--SKAYLAGKATAESLYLRTPDAYAAQN 74 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC-------BCSGGG--GTTTTTTCSCSGGGBSSCHHHHHHTT
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC-------CcCCCC--cHHHhCCCCChHHhcccCHHHHHhCC
Confidence 3689999999999999999999998 799999987654 211110 0111000000 00001112233568
Q ss_pred ccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcce--eeeeccCCCC--
Q 035488 95 INPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEG--NVMHAGDYKS-- 170 (408)
Q Consensus 95 ~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~--~~~~~~~~~~-- 170 (408)
++++.+++|+.++... + .|++.++ .++.||+||+||| +.|..|++||.+. .+ .+.+.....+
T Consensus 75 v~~~~~~~v~~i~~~~--~--~v~~~~g-------~~~~~d~lviAtG--~~p~~~~i~G~~~-~~~~~v~~~~~~~d~~ 140 (431)
T 1q1r_A 75 IQLLGGTQVTAINRDR--Q--QVILSDG-------RALDYDRLVLATG--GRPRPLPVASGAV-GKANNFRYLRTLEDAE 140 (431)
T ss_dssp EEEECSCCEEEEETTT--T--EEEETTS-------CEEECSEEEECCC--EEECCCGGGTTHH-HHSTTEEESSSHHHHH
T ss_pred CEEEeCCEEEEEECCC--C--EEEECCC-------CEEECCEEEEcCC--CCccCCCCCCccc-CCCceEEEECCHHHHH
Confidence 8888999999998654 3 3776553 5799999999999 6788888888642 11 0222111111
Q ss_pred ---CCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHH
Q 035488 171 ---GASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILAR 247 (408)
Q Consensus 171 ---~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (408)
.....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .+++.... .++...+
T Consensus 141 ~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~----~~~~~~l------------------ 197 (431)
T 1q1r_A 141 CIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA-RVLERVTA----PPVSAFY------------------ 197 (431)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTTTSC----HHHHHHH------------------
T ss_pred HHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccchhh----HHHHHHH------------------
Confidence 111358999999999999999999999999999999887 44443111 0111111
Q ss_pred HHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC----C---eEEEecCcEEccCEE
Q 035488 248 LILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP----G---KVELVNGQVLEIDSV 318 (408)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~----~---~v~~~~g~~~~~D~v 318 (408)
.+.+++.+|+++.+ +.+++. + .+.+.+|+++++|.|
T Consensus 198 -----------------------------------~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~V 242 (431)
T 1q1r_A 198 -----------------------------------EHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLV 242 (431)
T ss_dssp -----------------------------------HHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEE
T ss_pred -----------------------------------HHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEE
Confidence 22234446777766 677764 2 367788999999999
Q ss_pred EEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC-------------ccchhhHHHHHHHHHHH
Q 035488 319 VLATGYRSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRGL-------------SGASLDAMSVALDIAKS 385 (408)
Q Consensus 319 i~atG~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~-------------~~a~~~a~~~a~~i~~~ 385 (408)
|+|+|++|++ .+++..++..++| +.+| +..+|+.|+|||+|||+..+ ..|..||+.+|.+|.+.
T Consensus 243 v~a~G~~p~~-~l~~~~gl~~~~g-i~Vd-~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 319 (431)
T 1q1r_A 243 IAGIGLIPNC-ELASAAGLQVDNG-IVIN-EHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGK 319 (431)
T ss_dssp EECCCEEECC-HHHHHTTCCBSSS-EECC-TTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTC
T ss_pred EECCCCCcCc-chhhccCCCCCCC-EEEC-CCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCC
Confidence 9999999998 6777777755566 7777 46789999999999998642 24789999999999764
No 44
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.98 E-value=2.1e-32 Score=265.74 Aligned_cols=292 Identities=13% Similarity=0.114 Sum_probs=197.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCC-CCCeeee-cC------C--cc--ccCCCCCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRT-YDRLKLH-LP------K--QF--CQLPNFPFPEDF 86 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~-~~~~~~~-~~------~--~~--~~~~~~~~~~~~ 86 (408)
.+||+||||||+|+++|..|++.|++|+|||+++.+||.|.... .+...+. .. . .+ +..+......++
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNL 85 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCH
Confidence 46899999999999999999999999999999989999774210 0000000 00 0 00 000000000000
Q ss_pred ------------------CCCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCC
Q 035488 87 ------------------PRVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKI 148 (408)
Q Consensus 87 ------------------~~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~ 148 (408)
..++.+.+++++.++. ..++ . +.+.|++.++ +. .++.||+||+||| +.|.
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~-~~~~--~--~~~~v~~~~g--g~---~~~~~d~lViAtG--s~p~ 153 (474)
T 1zmd_A 86 DKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYG-KITG--K--NQVTATKADG--GT---QVIDTKNILIATG--SEVT 153 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEE-EEEE--T--TEEEEECTTS--CE---EEEEEEEEEECCC--EEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEE-EEec--C--CEEEEEecCC--Cc---EEEEeCEEEECCC--CCCC
Confidence 1112245667766543 2332 2 4555554331 11 5799999999999 6788
Q ss_pred CCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeec-ccccCCchHHHHH
Q 035488 149 EPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLP-REVLGKSTFQLAV 227 (408)
Q Consensus 149 ~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p-~~~~~~~~~~~~~ 227 (408)
.|+++|.+.. .+++..+...... .+++++|||+|.+|+|+|..|.+.|.+|+++++.+ +++| ..+. ++..
T Consensus 154 ~p~i~g~~~~--~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~-----~~~~ 224 (474)
T 1zmd_A 154 PFPGITIDED--TIVSSTGALSLKK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG-HVGGVGIDM-----EISK 224 (474)
T ss_dssp CCTTCCCCSS--SEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSCSSCCH-----HHHH
T ss_pred CCCCCCCCcC--cEEcHHHHhhccc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC-ccCCcccCH-----HHHH
Confidence 8888886532 3455554444332 57999999999999999999999999999999988 5655 3322 2222
Q ss_pred HHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC--
Q 035488 228 LMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG-- 303 (408)
Q Consensus 228 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-- 303 (408)
.+ .+.+++.+|+++.+ +.+++.+
T Consensus 225 ~l-----------------------------------------------------~~~l~~~Gv~i~~~~~v~~i~~~~~ 251 (474)
T 1zmd_A 225 NF-----------------------------------------------------QRILQKQGFKFKLNTKVTGATKKSD 251 (474)
T ss_dssp HH-----------------------------------------------------HHHHHHTTCEEECSEEEEEEEECTT
T ss_pred HH-----------------------------------------------------HHHHHHCCCEEEeCceEEEEEEcCC
Confidence 21 23344557888776 7777643
Q ss_pred e-EEE-------ecCcEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---c
Q 035488 304 K-VEL-------VNGQVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---G 370 (408)
Q Consensus 304 ~-v~~-------~~g~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~ 370 (408)
+ +.+ .+++++++|.||+|+|++|++..+ ++..++ .+.+|++.+| +.++|+.|+|||+|||+..+. .
T Consensus 252 ~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~ 330 (474)
T 1zmd_A 252 GKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVN-TRFQTKIPNIYAIGDVVAGPMLAHK 330 (474)
T ss_dssp SCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCC-TTCBCSSTTEEECGGGSSSCCCHHH
T ss_pred ceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEEC-cCCccCCCCEEEeeecCCCCccHHH
Confidence 2 332 356789999999999999998333 566666 4667989988 467899999999999987654 6
Q ss_pred chhhHHHHHHHHHHH
Q 035488 371 ASLDAMSVALDIAKS 385 (408)
Q Consensus 371 a~~~a~~~a~~i~~~ 385 (408)
|..||+.+|.+|.+.
T Consensus 331 A~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 331 AEDEGIICVEGMAGG 345 (474)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 889999999999864
No 45
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.98 E-value=3.2e-33 Score=272.24 Aligned_cols=289 Identities=15% Similarity=0.181 Sum_probs=194.8
Q ss_pred cCCcEEECCChHHHHHHHHHHH-cCCCEEEEe--------cCCCCCCccCC-CCCCCeeeecC----CccccCCCCCC--
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN-QGVPFIILE--------RANCIASLWQN-RTYDRLKLHLP----KQFCQLPNFPF-- 82 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~-~g~~v~lie--------~~~~~gg~w~~-~~~~~~~~~~~----~~~~~~~~~~~-- 82 (408)
.+||+||||||+|+++|..|++ .|++|+||| +...+||+|.. ..++...+... ..+.....+.+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 4699999999999999999999 999999999 35678887642 11110000000 00000000000
Q ss_pred -----CCCCCC------------------CCCcc-CccccccceeEEEEEcCCCCcEEEEEeecCC----CCcceEEEEe
Q 035488 83 -----PEDFPR------------------VPHQF-DINPRFNETVQSAKYDETFGFWRIKTISSSD----SSFCEVEYIC 134 (408)
Q Consensus 83 -----~~~~~~------------------~~~~~-~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~----~~~~~~~i~a 134 (408)
..++.. .+.+. +++++.++ +..++ . . +|++.+..+ .. ..+.|
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~--~--~--~v~v~~~~~~~~~~~---~~~~~ 156 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGW-GSLES--K--N--VVVVRETADPKSAVK---ERLQA 156 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESE-EEEEE--T--T--EEEEESSSSTTSCEE---EEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeE-EEEee--C--C--EEEEeecCCccCCCC---eEEEc
Confidence 001000 01133 56665543 44443 1 2 366652111 01 57999
Q ss_pred CEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhcc---CCccEEEEecCce
Q 035488 135 RWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNH---NAKPSMVVRSSVH 211 (408)
Q Consensus 135 d~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~---g~~V~~~~r~~~~ 211 (408)
|+||+||| +.|..|++||.+. +++..++.... ..+++++|||+|.+|+|+|..|.+. |.+|+++++.+ +
T Consensus 157 d~lViATG--s~p~~p~i~G~~~----~~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~-~ 228 (495)
T 2wpf_A 157 DHILLATG--SWPQMPAIPGIEH----CISSNEAFYLP-EPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNN-L 228 (495)
T ss_dssp EEEEECCC--EEECCCCCTTGGG----CEEHHHHTTCS-SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS-S
T ss_pred CEEEEeCC--CCcCCCCCCCccc----cccHHHHHhhh-hcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCC-c
Confidence 99999999 7788888888642 34444433332 3578999999999999999999999 99999999988 5
Q ss_pred eecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCe
Q 035488 212 VLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDI 291 (408)
Q Consensus 212 ~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 291 (408)
++|..+. ++...+ .+.+++.+|
T Consensus 229 ~l~~~d~-----~~~~~l-----------------------------------------------------~~~l~~~GV 250 (495)
T 2wpf_A 229 ILRGFDE-----TIREEV-----------------------------------------------------TKQLTANGI 250 (495)
T ss_dssp SCTTSCH-----HHHHHH-----------------------------------------------------HHHHHHTTC
T ss_pred cccccCH-----HHHHHH-----------------------------------------------------HHHHHhCCC
Confidence 6554332 222221 233445577
Q ss_pred EEecC--ccEEeCC-----eEEEecCcEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEe
Q 035488 292 KVVPG--IKKFSPG-----KVELVNGQVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVG 362 (408)
Q Consensus 292 ~~~~~--i~~~~~~-----~v~~~~g~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~G 362 (408)
+++.+ +.+++.+ .+.+.+|+++++|.||+|+|++|++..+ ++..++ .+.+|++.+| +.++|+.|+|||+|
T Consensus 251 ~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~G 329 (495)
T 2wpf_A 251 EIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVD-EFSRTNVPNIYAIG 329 (495)
T ss_dssp EEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCC-TTCBCSSTTEEECG
T ss_pred EEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEEC-CCCccCCCCEEEEe
Confidence 88776 7777642 3677788899999999999999998435 566677 4568999988 56789999999999
Q ss_pred eccccCc---cchhhHHHHHHHHHH
Q 035488 363 FTKRGLS---GASLDAMSVALDIAK 384 (408)
Q Consensus 363 d~~~~~~---~a~~~a~~~a~~i~~ 384 (408)
||++.+. .|..||+.+|.+|.+
T Consensus 330 D~~~~~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 330 DITDRLMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp GGGCSCCCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCccCHHHHHHHHHHHHHHhcC
Confidence 9997544 688999999999986
No 46
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.98 E-value=1.7e-32 Score=264.84 Aligned_cols=288 Identities=17% Similarity=0.238 Sum_probs=196.4
Q ss_pred CCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
+||+|||||++|+++|..|++. |.+|+|||+++.++.... .+.......+..............++.+.++++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~ 75 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC-----GIALYLGKEIKNNDPRGLFYSSPEELSNLGANV 75 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG-----GHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc-----cchhhhcCCcccCCHHHhhhcCHHHHHHcCCEE
Confidence 4799999999999999999999 999999999886542110 000000000000000000001112233567888
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCC-----C
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSG-----A 172 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~-----~ 172 (408)
+++++|+.++... +. |++.+..+++ ..++.||+||+||| +.|..|++||.+.. .+++...+.+. .
T Consensus 76 ~~~~~v~~i~~~~--~~--v~v~~~~~g~--~~~~~~d~lviAtG--s~p~~p~i~g~~~~--~v~~~~~~~~~~~~~~~ 145 (452)
T 2cdu_A 76 QMRHQVTNVDPET--KT--IKVKDLITNE--EKTEAYDKLIMTTG--SKPTVPPIPGIDSS--RVYLCKNYNDAKKLFEE 145 (452)
T ss_dssp EESEEEEEEEGGG--TE--EEEEETTTCC--EEEEECSEEEECCC--EEECCCCCTTTTST--TEEECSSHHHHHHHHHH
T ss_pred EeCCEEEEEEcCC--CE--EEEEecCCCc--eEEEECCEEEEccC--CCcCCCCCCCCCCC--CEEEeCcHHHHHHHHHH
Confidence 8889999998765 55 4444311111 15799999999999 77888888887531 23443222111 1
Q ss_pred CCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecc-cccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhh
Q 035488 173 SYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPR-EVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILG 251 (408)
Q Consensus 173 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 251 (408)
...+++++|||+|.+|+|+|..|.+.|.+|+++++.+ ++++. .+. ++...+
T Consensus 146 ~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~-----~~~~~l---------------------- 197 (452)
T 2cdu_A 146 APKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE-RVLYKYFDK-----EFTDIL---------------------- 197 (452)
T ss_dssp GGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS-STTTTTSCH-----HHHHHH----------------------
T ss_pred hccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC-chhhhhhhh-----hHHHHH----------------------
Confidence 1358899999999999999999999999999999988 45452 221 222111
Q ss_pred hhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC--CeE--EEecCcEEccCEEEEcCCCC
Q 035488 252 NVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP--GKV--ELVNGQVLEIDSVVLATGYR 325 (408)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--~~v--~~~~g~~~~~D~vi~atG~~ 325 (408)
.+.+++.+|+++.+ +++++. +.+ ...+|+++++|.||+|+|++
T Consensus 198 -------------------------------~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 198 -------------------------------AKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFR 246 (452)
T ss_dssp -------------------------------HHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEE
T ss_pred -------------------------------HHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCC
Confidence 23345567888776 777764 333 23478899999999999999
Q ss_pred CCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC-------------ccchhhHHHHHHHHHH
Q 035488 326 SNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGL-------------SGASLDAMSVALDIAK 384 (408)
Q Consensus 326 ~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~-------------~~a~~~a~~~a~~i~~ 384 (408)
|++ .+++.. + .+.+|++.+| +.++|+.|+|||+|||+... ..|..||+.+|.+|.+
T Consensus 247 p~~-~ll~~~-l~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 316 (452)
T 2cdu_A 247 PNT-ELLKGK-VAMLDNGAIITD-EYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTE 316 (452)
T ss_dssp ECC-GGGTTT-SCBCTTSCBCCC-TTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred CCH-HHHHHh-hhcCCCCCEEEC-CCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCC
Confidence 998 577666 5 4578999998 56889999999999998631 2678999999999975
No 47
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.7e-33 Score=269.78 Aligned_cols=288 Identities=15% Similarity=0.203 Sum_probs=192.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeee-------e-c-CCccccCCCC----C--C
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKL-------H-L-PKQFCQLPNF----P--F 82 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~-------~-~-~~~~~~~~~~----~--~ 82 (408)
.+||+|||||++|+++|..|++.|.+|+|||++ .+||.|... ..+...+ . . ....+..... . .
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHL 89 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGC
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccC
Confidence 469999999999999999999999999999997 688876421 0000000 0 0 0000000000 0 0
Q ss_pred CCCCCC------------------CCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCC
Q 035488 83 PEDFPR------------------VPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGEN 144 (408)
Q Consensus 83 ~~~~~~------------------~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~ 144 (408)
..++.. .+.+.++++..+ ++..+ +. +.+.|...++ .. .++.||+||+|||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i--~~--~~~~v~~~~g--~~---~~~~~d~lviAtG-- 157 (479)
T 2hqm_A 90 TFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFG-WARFN--KD--GNVEVQKRDN--TT---EVYSANHILVATG-- 157 (479)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEE-EEEEC--TT--SCEEEEESSS--CC---EEEEEEEEEECCC--
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEe--eC--CEEEEEeCCC--cE---EEEEeCEEEEcCC--
Confidence 001000 011234555443 24333 22 4455554332 11 4799999999999
Q ss_pred CCCCCC-CCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchH
Q 035488 145 AEKIEP-EFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTF 223 (408)
Q Consensus 145 ~~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~ 223 (408)
+.|..| ++||.+. +++..++... ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .++|..+.
T Consensus 158 s~p~~p~~i~g~~~----~~~~~~~~~l-~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~----- 226 (479)
T 2hqm_A 158 GKAIFPENIPGFEL----GTDSDGFFRL-EEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGE-TVLRKFDE----- 226 (479)
T ss_dssp EEECCCTTSTTGGG----SBCHHHHHHC-SSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH-----
T ss_pred CCCCCCCCCCCccc----ccchHHHhcc-cccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCC-ccccccCH-----
Confidence 778888 8888642 2222222221 2367899999999999999999999999999999988 55554332
Q ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEe
Q 035488 224 QLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFS 301 (408)
Q Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~ 301 (408)
++...+ .+.+++.+|+++.+ +++++
T Consensus 227 ~~~~~l-----------------------------------------------------~~~l~~~Gv~i~~~~~v~~i~ 253 (479)
T 2hqm_A 227 CIQNTI-----------------------------------------------------TDHYVKEGINVHKLSKIVKVE 253 (479)
T ss_dssp HHHHHH-----------------------------------------------------HHHHHHHTCEEECSCCEEEEE
T ss_pred HHHHHH-----------------------------------------------------HHHHHhCCeEEEeCCEEEEEE
Confidence 222222 22234456777776 67775
Q ss_pred CC------eEEEecC-cEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---
Q 035488 302 PG------KVELVNG-QVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS--- 369 (408)
Q Consensus 302 ~~------~v~~~~g-~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~--- 369 (408)
.+ .+.+.+| +++++|.||+|+|++|++ .| ++..++ .+.+|++.+| +.++|+.|+|||+|||++.+.
T Consensus 254 ~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~ 331 (479)
T 2hqm_A 254 KNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL-GMGSENVGIKLNSHDQIIAD-EYQNTNVPNIYSLGDVVGKVELTP 331 (479)
T ss_dssp ECC-CCCEEEEETTSCEEEEESEEEECSCEEECC-CSSGGGGTCCBCTTSCBCCC-TTCBCSSTTEEECGGGTTSSCCHH
T ss_pred EcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc-ccChhhcCceECCCCCEeEC-CCCccCCCCEEEEEecCCCcccHH
Confidence 42 3667788 789999999999999998 77 677777 5668999988 467899999999999986544
Q ss_pred cchhhHHHHHHHHHHH
Q 035488 370 GASLDAMSVALDIAKS 385 (408)
Q Consensus 370 ~a~~~a~~~a~~i~~~ 385 (408)
.|..||+.+|.+|.+.
T Consensus 332 ~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 332 VAIAAGRKLSNRLFGP 347 (479)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCC
Confidence 6889999999999864
No 48
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.97 E-value=3.7e-32 Score=263.32 Aligned_cols=289 Identities=18% Similarity=0.200 Sum_probs=192.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeee------------ec-CCccccCCCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKL------------HL-PKQFCQLPNFPFPE 84 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~------------~~-~~~~~~~~~~~~~~ 84 (408)
.+||+||||||+|+++|..|++.|++|+|||++ .+||.|... ..+...+ .. ...+.......+..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 468999999999999999999999999999998 677765311 0000000 00 00000000000000
Q ss_pred --------------CCCCCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCC
Q 035488 85 --------------DFPRVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEP 150 (408)
Q Consensus 85 --------------~~~~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p 150 (408)
.+..++.+.+++++.++.+. + +. +.+.|++.++ .. .++.||+||+||| +.|..|
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-i--d~--~~v~V~~~~G--~~---~~~~~d~lViAtG--~~~~~~ 149 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-A--DA--NTLLVDLNDG--GT---ESVTFDNAIIATG--SSTRLV 149 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-S--SS--SEEEEEETTS--CC---EEEEEEEEEECCC--EEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cC--CeEEEEeCCC--ce---EEEEcCEEEECCC--CCCCCC
Confidence 00011224566776665443 2 22 4555554332 21 5799999999999 667777
Q ss_pred CCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHH
Q 035488 151 EFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMM 230 (408)
Q Consensus 151 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~ 230 (408)
+++|.+. .+++..+..... ..+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+. ++...+.
T Consensus 150 ~~~g~~~---~~~~~~~~~~~~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~l~ 219 (464)
T 2a8x_A 150 PGTSLSA---NVVTYEEQILSR-ELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP-RALPNEDA-----DVSKEIE 219 (464)
T ss_dssp TTCCCBT---TEECHHHHHTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHHHHHH
T ss_pred CCCCCCc---eEEecHHHhhcc-ccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH-----HHHHHHH
Confidence 7777543 244444433322 257999999999999999999999999999999988 56664332 2222222
Q ss_pred hhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCe----
Q 035488 231 KYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGK---- 304 (408)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~---- 304 (408)
+.+++.+|+++.+ +.+++++.
T Consensus 220 -----------------------------------------------------~~l~~~gv~i~~~~~v~~i~~~~~~~~ 246 (464)
T 2a8x_A 220 -----------------------------------------------------KQFKKLGVTILTATKVESIADGGSQVT 246 (464)
T ss_dssp -----------------------------------------------------HHHHHHTCEEECSCEEEEEEECSSCEE
T ss_pred -----------------------------------------------------HHHHHcCCEEEeCcEEEEEEEcCCeEE
Confidence 2233446777776 77776432
Q ss_pred EEEe-cC--cEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---cchhhHH
Q 035488 305 VELV-NG--QVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GASLDAM 376 (408)
Q Consensus 305 v~~~-~g--~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~~a~ 376 (408)
+.+. +| +++++|.||+|+|++|++..+ ++..++ .+++|++.+| +.++|+.|+|||+|||+..+. .|..||+
T Consensus 247 v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~ 325 (464)
T 2a8x_A 247 VTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVD-DYMRTNVGHIYAIGDVNGLLQLAHVAEAQGV 325 (464)
T ss_dssp EEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCC-TTSBCSSTTEEECGGGGCSSCSHHHHHHHHH
T ss_pred EEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeEC-cCCccCCCCEEEeECcCCCccCHHHHHHHHH
Confidence 3443 56 679999999999999998333 566666 4567999998 467799999999999987654 6889999
Q ss_pred HHHHHHHH
Q 035488 377 SVALDIAK 384 (408)
Q Consensus 377 ~~a~~i~~ 384 (408)
.+|.+|.+
T Consensus 326 ~aa~~i~g 333 (464)
T 2a8x_A 326 VAAETIAG 333 (464)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhcC
Confidence 99999986
No 49
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=1.8e-32 Score=267.51 Aligned_cols=285 Identities=14% Similarity=0.183 Sum_probs=186.3
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeee-------e-c-CCccccCCCCCCCCCCCC-
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKL-------H-L-PKQFCQLPNFPFPEDFPR- 88 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~-------~-~-~~~~~~~~~~~~~~~~~~- 88 (408)
+||+|||||++|+++|..|++.|.+|+|||++ .+||+|... ..+...+ . . ....+.+... ...++..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~~ 80 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK-FSFNLPLL 80 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC-CCCCHHHH
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC-CccCHHHH
Confidence 69999999999999999999999999999998 478877421 0110000 0 0 0000011100 0001110
Q ss_pred -----------------CCCccCccccccceeEEEEEcCCCCcEEEEEeec---------CCCCcceEEEEeCEEEEeeC
Q 035488 89 -----------------VPHQFDINPRFNETVQSAKYDETFGFWRIKTISS---------SDSSFCEVEYICRWLVVATG 142 (408)
Q Consensus 89 -----------------~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~---------~~~~~~~~~i~ad~vViAtG 142 (408)
++.+.+++++.++ +..++. +. |++.+. ++.. .++.||+||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~id~----~~--v~v~~~~~~~~~~~~~~~~---~~~~~d~lViAtG 150 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDKVDLYEGT-ASFLSE----NR--ILIKGTKDNNNKDNGPLNE---EILEGRNILIAVG 150 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CCCC-----------------------------------CBSSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEeeC----CE--EEEEeccccccccccCCCc---eEEEeCEEEECCC
Confidence 0113455555543 222221 22 333220 0001 4789999999999
Q ss_pred CCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCch
Q 035488 143 ENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKST 222 (408)
Q Consensus 143 ~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~ 222 (408)
+.|..|++||.+. +++..++..... +++++|||+|.+|+|+|..|++.|.+|+++.+.+ +++|..+.
T Consensus 151 --s~p~~p~i~G~~~----~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~---- 217 (500)
T 1onf_A 151 --NKPVFPPVKGIEN----TISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN-RILRKFDE---- 217 (500)
T ss_dssp --CCBCCCSCTTGGG----CEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-SSCTTSCH----
T ss_pred --CCCCCCCCCCCCc----ccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC-ccCcccch----
Confidence 6788888888642 345444443332 8899999999999999999999999999999988 56554332
Q ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEE
Q 035488 223 FQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKF 300 (408)
Q Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~ 300 (408)
++...+ .+.+++.+|+++.+ +.++
T Consensus 218 -~~~~~l-----------------------------------------------------~~~l~~~gv~i~~~~~v~~i 243 (500)
T 1onf_A 218 -SVINVL-----------------------------------------------------ENDMKKNNINIVTFADVVEI 243 (500)
T ss_dssp -HHHHHH-----------------------------------------------------HHHHHHTTCEEECSCCEEEE
T ss_pred -hhHHHH-----------------------------------------------------HHHHHhCCCEEEECCEEEEE
Confidence 222222 23345567888776 7777
Q ss_pred eCC-----eEEEecCcE-EccCEEEEcCCCCCCCCCc-ccccccccCCCCCCCCCCCCCCCCCceEEEeecc--------
Q 035488 301 SPG-----KVELVNGQV-LEIDSVVLATGYRSNVPSW-LKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTK-------- 365 (408)
Q Consensus 301 ~~~-----~v~~~~g~~-~~~D~vi~atG~~~~~~~l-~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~-------- 365 (408)
+.+ .+.+.+|++ +++|.||+|+|++|++..| ++..++...+|++.+| +.++|+.|+|||+|||+
T Consensus 244 ~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~ 322 (500)
T 1onf_A 244 KKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVD-ENQRTSVNNIYAVGDCCMVKKSKEI 322 (500)
T ss_dssp EESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEEC-TTCBCSSSSEEECSTTEEEC-----
T ss_pred EEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEEC-CCcccCCCCEEEEeccccccccccc
Confidence 642 366778887 9999999999999998545 6777774478889888 46779999999999998
Q ss_pred --------------------------ccCc---cchhhHHHHHHHHHH
Q 035488 366 --------------------------RGLS---GASLDAMSVALDIAK 384 (408)
Q Consensus 366 --------------------------~~~~---~a~~~a~~~a~~i~~ 384 (408)
+.+. .|..||+.+|.+|.+
T Consensus 323 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 323 EDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp -------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred cccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 2222 578999999999986
No 50
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.97 E-value=4.3e-32 Score=263.90 Aligned_cols=287 Identities=16% Similarity=0.148 Sum_probs=189.9
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeee-e--------cCCccccCCCCCCCCCCC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKL-H--------LPKQFCQLPNFPFPEDFP 87 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~-~--------~~~~~~~~~~~~~~~~~~ 87 (408)
..+||+||||||+|+++|..|++.|++|+|||++ .+||+|... ..+...+ . .....+.++......++.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 97 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWR 97 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 3689999999999999999999999999999976 678865321 0000000 0 000000111000000000
Q ss_pred CC------------------CCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 88 RV------------------PHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 88 ~~------------------~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
.. ..+.++++..+ ++..++ . ..+.|+. ++ .++.||+||+||| +.|..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~~~--~--~~~~v~~-~g-------~~~~~d~lviAtG--~~p~~ 162 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG-HAAFTS--D--PKPTIEV-SG-------KKYTAPHILIATG--GMPST 162 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEECS--C--SSCEEEE-TT-------EEEECSCEEECCC--EEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEee--C--CeEEEEE-CC-------EEEEeeEEEEccC--CCCCC
Confidence 00 00223333332 222221 1 2344553 22 5799999999999 78888
Q ss_pred C---CCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHH
Q 035488 150 P---EFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLA 226 (408)
Q Consensus 150 p---~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~ 226 (408)
| ++||.+. ..+...+... ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ ++++..+. ++.
T Consensus 163 p~~~~i~G~~~----~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~~~ 231 (478)
T 3dk9_A 163 PHESQIPGASL----GITSDGFFQL-EELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD-KVLRSFDS-----MIS 231 (478)
T ss_dssp CCTTTSTTGGG----SBCHHHHTTC-CSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH-----HHH
T ss_pred CCcCCCCCCce----eEchHHhhch-hhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC-ccccccCH-----HHH
Confidence 8 8888652 2233333222 2357899999999999999999999999999999988 55554433 222
Q ss_pred HHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC-
Q 035488 227 VLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG- 303 (408)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~- 303 (408)
..+ .+.+++.+|+++.+ +.+++..
T Consensus 232 ~~~-----------------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~~ 258 (478)
T 3dk9_A 232 TNC-----------------------------------------------------TEELENAGVEVLKFSQVKEVKKTL 258 (478)
T ss_dssp HHH-----------------------------------------------------HHHHHHTTCEEETTEEEEEEEECS
T ss_pred HHH-----------------------------------------------------HHHHHHCCCEEEeCCEEEEEEEcC
Confidence 221 23344567888876 6777532
Q ss_pred -e----EEEec-------CcEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc
Q 035488 304 -K----VELVN-------GQVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS 369 (408)
Q Consensus 304 -~----v~~~~-------g~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~ 369 (408)
+ +.+.+ |+.+++|.||+|+|++|+...+ ++..++ .+.+|++.+| +.++|+.|+|||+|||++.+.
T Consensus 259 ~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~ 337 (478)
T 3dk9_A 259 SGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD-EFQNTNVKGIYAVGDVCGKAL 337 (478)
T ss_dssp SSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCC-TTCBCSSTTEEECGGGGCSSC
T ss_pred CCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeC-CCcccCCCCEEEEEecCCCCc
Confidence 2 44544 2678999999999999998545 677777 5678999998 577899999999999996554
Q ss_pred ---cchhhHHHHHHHHHHH
Q 035488 370 ---GASLDAMSVALDIAKS 385 (408)
Q Consensus 370 ---~a~~~a~~~a~~i~~~ 385 (408)
.|..||+.+|.+|.+.
T Consensus 338 ~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 338 LTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp CHHHHHHHHHHHHHHHHSC
T ss_pred cHhHHHHHHHHHHHHHcCC
Confidence 6889999999999865
No 51
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.97 E-value=1.7e-32 Score=266.85 Aligned_cols=291 Identities=13% Similarity=0.125 Sum_probs=195.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeee-e-------c-CCccccCCCCCCCCCCC-
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKL-H-------L-PKQFCQLPNFPFPEDFP- 87 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~-~-------~-~~~~~~~~~~~~~~~~~- 87 (408)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|... ..+...+ . . ....+..+......++.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDM 85 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 3689999999999999999999999999999988888865321 0000000 0 0 00001111100000100
Q ss_pred -----------------CCCCccCccccccceeEEEEEcCCCCcEEEEEeec--------CCCCcceEEEEeCEEEEeeC
Q 035488 88 -----------------RVPHQFDINPRFNETVQSAKYDETFGFWRIKTISS--------SDSSFCEVEYICRWLVVATG 142 (408)
Q Consensus 88 -----------------~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~--------~~~~~~~~~i~ad~vViAtG 142 (408)
.+..+.+++++.++.+. + +. +.+.|++.++ ++. ..+++||+||+|||
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~v~v~~~~g~~~~~~~~~g~---~~~i~ad~lViAtG 157 (482)
T 1ojt_A 86 LRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-L--DP--HHLEVSLTAGDAYEQAAPTGE---KKIVAFKNCIIAAG 157 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-E--ET--TEEEEEEEEEEETTEEEEEEE---EEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-c--cC--CEEEEEecCCcccccccccCc---ceEEEcCEEEECCC
Confidence 11124466666665443 2 22 4555654332 010 14799999999999
Q ss_pred CCCCCCCCC-CCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCc
Q 035488 143 ENAEKIEPE-FEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKS 221 (408)
Q Consensus 143 ~~~~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~ 221 (408)
+.|..|+ ++ .+. .+++..+..... ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+ +++|..+.
T Consensus 158 --s~p~~~~~i~-~~~---~v~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~--- 226 (482)
T 1ojt_A 158 --SRVTKLPFIP-EDP---RIIDSSGALALK-EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD-GLMQGADR--- 226 (482)
T ss_dssp --EEECCCSSCC-CCT---TEECHHHHTTCC-CCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCH---
T ss_pred --CCCCCCCCCC-ccC---cEEcHHHHhccc-ccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-ccccccCH---
Confidence 5566665 54 221 344544443332 258999999999999999999999999999999988 56554332
Q ss_pred hHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccE
Q 035488 222 TFQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKK 299 (408)
Q Consensus 222 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~ 299 (408)
++...+ .+.+++.+|+++.+ +.+
T Consensus 227 --~~~~~l-----------------------------------------------------~~~l~~~gV~i~~~~~v~~ 251 (482)
T 1ojt_A 227 --DLVKVW-----------------------------------------------------QKQNEYRFDNIMVNTKTVA 251 (482)
T ss_dssp --HHHHHH-----------------------------------------------------HHHHGGGEEEEECSCEEEE
T ss_pred --HHHHHH-----------------------------------------------------HHHHHhcCCEEEECCEEEE
Confidence 222222 23345567888877 777
Q ss_pred EeCC----eEEEec----CcEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc
Q 035488 300 FSPG----KVELVN----GQVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS 369 (408)
Q Consensus 300 ~~~~----~v~~~~----g~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~ 369 (408)
++.+ .+.+.+ |+++++|.||+|+|++|++..+ ++..++ .+.+|++.+| +.++|+.|+|||+|||+..+.
T Consensus 252 i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~ 330 (482)
T 1ojt_A 252 VEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVD-KQMRTNVPHIYAIGDIVGQPM 330 (482)
T ss_dssp EEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCC-TTSBCSSTTEEECGGGTCSSC
T ss_pred EEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeC-CCcccCCCCEEEEEcccCCCc
Confidence 7543 266666 7789999999999999998333 577777 4567999998 578899999999999988644
Q ss_pred ---cchhhHHHHHHHHHH
Q 035488 370 ---GASLDAMSVALDIAK 384 (408)
Q Consensus 370 ---~a~~~a~~~a~~i~~ 384 (408)
.|..||+.+|.+|.+
T Consensus 331 l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 331 LAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp CHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHcC
Confidence 688999999999986
No 52
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.97 E-value=1.1e-32 Score=269.37 Aligned_cols=293 Identities=14% Similarity=0.103 Sum_probs=197.2
Q ss_pred CCcEEECCChHHHHHHHHHHHc---CCCEEEEecCCCCCCccCCC-CCCCeee-ec--------CCccccCCC--CCCCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQ---GVPFIILERANCIASLWQNR-TYDRLKL-HL--------PKQFCQLPN--FPFPE 84 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~---g~~v~lie~~~~~gg~w~~~-~~~~~~~-~~--------~~~~~~~~~--~~~~~ 84 (408)
+||+|||||++|+++|..|++. |++|+|||+++ +||.|... ..+...+ .. ....+.++. .....
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 6899999999999999999999 99999999988 88865321 0000000 00 000001100 00000
Q ss_pred CC------------------CCCCCccCccccccceeEEEEEcC--CCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCC
Q 035488 85 DF------------------PRVPHQFDINPRFNETVQSAKYDE--TFGFWRIKTISSSDSSFCEVEYICRWLVVATGEN 144 (408)
Q Consensus 85 ~~------------------~~~~~~~~~~~~~~~~V~~i~~~~--~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~ 144 (408)
++ .+++.+.+++++.++ +..++... ..+.+.|...++ .. ..+.||+||+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g--~~---~~~~~d~lviATG-- 153 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADG--ST---SEHEADVVLVATG-- 153 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTS--CE---EEEEESEEEECCC--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCC--cE---EEEEeCEEEEcCC--
Confidence 10 111224566776654 55554310 002333443322 11 3799999999999
Q ss_pred CCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHH
Q 035488 145 AEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQ 224 (408)
Q Consensus 145 ~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~ 224 (408)
+.|..|+++|.+.. .+++..+..... ..+++++|||+|.+|+|+|..+...|.+|+++.+.+ +++|..+. +
T Consensus 154 s~p~~p~i~g~~~~--~v~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~ 224 (499)
T 1xdi_A 154 ASPRILPSAQPDGE--RILTWRQLYDLD-ALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD-HVLPYEDA-----D 224 (499)
T ss_dssp EEECCCGGGCCCSS--SEEEGGGGGGCS-SCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS-SSSCCSSH-----H
T ss_pred CCCCCCCCCCCCcC--cEEehhHhhhhh-ccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH-----H
Confidence 77888888886542 245554444433 257899999999999999999999999999999988 56554332 2
Q ss_pred HHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC
Q 035488 225 LAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP 302 (408)
Q Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~ 302 (408)
+...+ .+.+++.+|+++.+ +++++.
T Consensus 225 ~~~~l-----------------------------------------------------~~~l~~~GV~i~~~~~V~~i~~ 251 (499)
T 1xdi_A 225 AALVL-----------------------------------------------------EESFAERGVRLFKNARAASVTR 251 (499)
T ss_dssp HHHHH-----------------------------------------------------HHHHHHTTCEEETTCCEEEEEE
T ss_pred HHHHH-----------------------------------------------------HHHHHHCCCEEEeCCEEEEEEE
Confidence 22221 23344567888776 777764
Q ss_pred Ce----EEEecCcEEccCEEEEcCCCCCCCCCc--cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---cch
Q 035488 303 GK----VELVNGQVLEIDSVVLATGYRSNVPSW--LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GAS 372 (408)
Q Consensus 303 ~~----v~~~~g~~~~~D~vi~atG~~~~~~~l--~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~ 372 (408)
++ +.+.+|+++++|.||+|+|++|+. .+ ++..++ .+.+|++.+| +.++|+.|+|||+|||+..+. .|.
T Consensus 252 ~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~-~~l~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~l~~~A~ 329 (499)
T 1xdi_A 252 TGAGVLVTMTDGRTVEGSHALMTIGSVPNT-SGLGLERVGIQLGRGNYLTVD-RVSRTLATGIYAAGDCTGLLPLASVAA 329 (499)
T ss_dssp CSSSEEEEETTSCEEEESEEEECCCEEECC-SSSCTTTTTCCCBTTTBCCCC-SSSBCSSTTEEECSGGGTSCSCHHHHH
T ss_pred eCCEEEEEECCCcEEEcCEEEECCCCCcCC-CcCCchhcCceECCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHH
Confidence 32 445678899999999999999998 55 666677 4567989988 567899999999999987654 688
Q ss_pred hhHHHHHHHHHHH
Q 035488 373 LDAMSVALDIAKS 385 (408)
Q Consensus 373 ~~a~~~a~~i~~~ 385 (408)
.||+.+|.+|.+.
T Consensus 330 ~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 330 MQGRIAMYHALGE 342 (499)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999999863
No 53
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.97 E-value=2.3e-32 Score=263.52 Aligned_cols=283 Identities=14% Similarity=0.155 Sum_probs=189.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeeee--------c--CCccccCCCCCCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKLH--------L--PKQFCQLPNFPFPEDFP 87 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~~--------~--~~~~~~~~~~~~~~~~~ 87 (408)
.+||+|||||++|+++|..|++.|.+|+|||++ .+||+|... ..+...+. . ....+.........++.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWE 82 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 368999999999999999999999999999998 678876321 00000000 0 00000000000000000
Q ss_pred ------------------CCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 88 ------------------RVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 88 ------------------~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
..+.+.+++++.+ ++..++ . . +|++ ++ ..+.||+||+||| +.|..
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~--~--~--~v~~-~g-------~~~~~d~lviAtG--s~p~~ 145 (450)
T 1ges_A 83 TLIASRTAYIDRIHTSYENVLGKNNVDVIKG-FARFVD--A--K--TLEV-NG-------ETITADHILIATG--GRPSH 145 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CCEEEE--T--T--EEEE-TT-------EEEEEEEEEECCC--EEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEec--C--C--EEEE-CC-------EEEEeCEEEECCC--CCCCC
Confidence 0011335555554 333343 1 2 2555 32 5799999999999 77888
Q ss_pred CCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHH
Q 035488 150 PEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLM 229 (408)
Q Consensus 150 p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~ 229 (408)
|++||.+. +.+..++... ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .+++..+. ++...+
T Consensus 146 p~i~g~~~----~~~~~~~~~~-~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~l 214 (450)
T 1ges_A 146 PDIPGVEY----GIDSDGFFAL-PALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD-APLPSFDP-----MISETL 214 (450)
T ss_dssp CCSTTGGG----SBCHHHHHHC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHHHHH
T ss_pred CCCCCccc----eecHHHhhhh-hhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC-chhhhhhH-----HHHHHH
Confidence 88888642 2233222222 2357899999999999999999999999999999987 45443322 222211
Q ss_pred HhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC----
Q 035488 230 MKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG---- 303 (408)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~---- 303 (408)
.+.+++.+|+++.+ +.+++.+
T Consensus 215 -----------------------------------------------------~~~l~~~Gv~i~~~~~v~~i~~~~~~~ 241 (450)
T 1ges_A 215 -----------------------------------------------------VEVMNAEGPQLHTNAIPKAVVKNTDGS 241 (450)
T ss_dssp -----------------------------------------------------HHHHHHHSCEEECSCCEEEEEECTTSC
T ss_pred -----------------------------------------------------HHHHHHCCCEEEeCCEEEEEEEeCCcE
Confidence 22233446777766 6777542
Q ss_pred -eEEEecCcEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---cchhhHHH
Q 035488 304 -KVELVNGQVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GASLDAMS 377 (408)
Q Consensus 304 -~v~~~~g~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~~a~~ 377 (408)
.+.+.+|+++++|.||+|+|++|++..+ ++..++ .+.+|++.+| +.++|+.|+|||+|||+..+. .|..||+.
T Consensus 242 ~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~ 320 (450)
T 1ges_A 242 LTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVD-KYQNTNIEGIYAVGDNTGAVELTPVAVAAGRR 320 (450)
T ss_dssp EEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECSGGGTSCCCHHHHHHHHHH
T ss_pred EEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeEC-CCCccCCCCEEEEeccCCCCccHHHHHHHHHH
Confidence 3677788899999999999999998444 566666 4668999988 466899999999999987543 68899999
Q ss_pred HHHHHHH
Q 035488 378 VALDIAK 384 (408)
Q Consensus 378 ~a~~i~~ 384 (408)
+|.+|.+
T Consensus 321 aa~~i~~ 327 (450)
T 1ges_A 321 LSERLFN 327 (450)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9999986
No 54
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.97 E-value=3.9e-32 Score=262.89 Aligned_cols=283 Identities=19% Similarity=0.214 Sum_probs=191.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCC-CCCeeeec-C--------CccccCCCCCCCCCCC-
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRT-YDRLKLHL-P--------KQFCQLPNFPFPEDFP- 87 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~-~~~~~~~~-~--------~~~~~~~~~~~~~~~~- 87 (408)
.+||+|||||++|+++|..|++.|++|+|||+++ +||+|.... .+...+.. . ...+..+. ....++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~-~~~~~~~~ 83 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKA-KPELDLKK 83 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEEC-CCEECHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCC-CCCcCHHH
Confidence 4689999999999999999999999999999987 888763211 10000000 0 00000000 0000110
Q ss_pred -----------------CCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCC
Q 035488 88 -----------------RVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEP 150 (408)
Q Consensus 88 -----------------~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p 150 (408)
.+..+.+++++.++.+. ++ . +. |++. + .++.||+||+||| +.|..|
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~--~--~~--v~v~-g-------~~~~~d~lViATG--s~p~~p 146 (464)
T 2eq6_A 84 LGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARL-VG--P--KE--VEVG-G-------ERYGAKSLILATG--SEPLEL 146 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEE-EE--T--TE--EEET-T-------EEEEEEEEEECCC--EEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEE-cc--C--CE--EEEc-c-------EEEEeCEEEEcCC--CCCCCC
Confidence 11123466666655432 32 2 33 5554 2 5899999999999 667776
Q ss_pred C-CCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHH
Q 035488 151 E-FEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLM 229 (408)
Q Consensus 151 ~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~ 229 (408)
+ +++. ..+++..+........+++++|||+|.+|+|+|..|.+.|.+|+++++.+ +++|..+. ++...+
T Consensus 147 ~gi~~~----~~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~l 216 (464)
T 2eq6_A 147 KGFPFG----EDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP-EILPQGDP-----ETAALL 216 (464)
T ss_dssp TTBCCS----SSEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHHHHH
T ss_pred CCCCCC----CcEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCH-----HHHHHH
Confidence 5 6652 13455554444333367999999999999999999999999999999988 55554332 222221
Q ss_pred HhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC--e-
Q 035488 230 MKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG--K- 304 (408)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~--~- 304 (408)
.+.+++.+|+++.+ +.+++.+ .
T Consensus 217 -----------------------------------------------------~~~l~~~gV~i~~~~~v~~i~~~~~~~ 243 (464)
T 2eq6_A 217 -----------------------------------------------------RRALEKEGIRVRTKTKAVGYEKKKDGL 243 (464)
T ss_dssp -----------------------------------------------------HHHHHHTTCEEECSEEEEEEEEETTEE
T ss_pred -----------------------------------------------------HHHHHhcCCEEEcCCEEEEEEEeCCEE
Confidence 23344557888776 7777542 2
Q ss_pred -EEEe-c--Cc--EEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---cchh
Q 035488 305 -VELV-N--GQ--VLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GASL 373 (408)
Q Consensus 305 -v~~~-~--g~--~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~ 373 (408)
+.+. + |+ ++++|.|++|+|++|+...+ ++..++ .+++|++.+| +.++|+.|+|||+|||+..+. .|..
T Consensus 244 ~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~l~~~A~~ 322 (464)
T 2eq6_A 244 HVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVN-ARMETSVPGVYAIGDAARPPLLAHKAMR 322 (464)
T ss_dssp EEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCC-TTCBCSSTTEEECGGGTCSSCCHHHHHH
T ss_pred EEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHH
Confidence 5555 6 76 89999999999999998433 455566 4568999988 467899999999999987654 6889
Q ss_pred hHHHHHHHHHH
Q 035488 374 DAMSVALDIAK 384 (408)
Q Consensus 374 ~a~~~a~~i~~ 384 (408)
||+.+|.+|.+
T Consensus 323 ~g~~aa~~i~g 333 (464)
T 2eq6_A 323 EGLIAAENAAG 333 (464)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999999986
No 55
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.97 E-value=4.4e-33 Score=267.37 Aligned_cols=274 Identities=20% Similarity=0.235 Sum_probs=183.6
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCC----CCCCCCcc
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPED----FPRVPHQF 93 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 93 (408)
..++|+||||||||+++|..|++.|++|+|||+.+.+||+|.+. ++.+..+.+ ..+++.++
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g---------------ip~~~~~~~~~~~~~~~l~~~ 185 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG---------------IPGFKLEKSVVERRVKLLADA 185 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT---------------SCTTTSCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec---------------CCCccCCHHHHHHHHHHHHHC
Confidence 35799999999999999999999999999999999999887542 111111111 11223355
Q ss_pred CccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCC-----
Q 035488 94 DINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDY----- 168 (408)
Q Consensus 94 ~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~----- 168 (408)
++++++++.|. .. +++.+ ..+.||+||+|||++ .+..+.+||.+. . .+++..++
T Consensus 186 gv~~~~~~~v~--------~~--v~~~~--------~~~~~d~vvlAtG~~-~~~~~~ipG~~~-~-gv~~a~~~l~~~~ 244 (456)
T 2vdc_G 186 GVIYHPNFEVG--------RD--ASLPE--------LRRKHVAVLVATGVY-KARDIKAPGSGL-G-NIVAALDYLTTSN 244 (456)
T ss_dssp TCEEETTCCBT--------TT--BCHHH--------HHSSCSEEEECCCCC-EECCTTCSCCTT-T-TEEEHHHHHHHHH
T ss_pred CcEEEeCCEec--------cE--EEhhH--------hHhhCCEEEEecCCC-CCCCCCCCCCcC-C-CcEEHHHHHHHhh
Confidence 77777766551 11 33322 235699999999953 356667887652 1 12221111
Q ss_pred ----CC--------CCCCCCCeEEEEccCCcHHHHHHHHhccCC-ccEEEEecCceeecccccCCchHHHHHHHHhhcch
Q 035488 169 ----KS--------GASYRGKRVLVVGCGNSGMEVSLDLCNHNA-KPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPL 235 (408)
Q Consensus 169 ----~~--------~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~-~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~ 235 (408)
.. .....+++|+|||+|.+|+|+|..+.+.|. +|++++|++...+|.... ++
T Consensus 245 ~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~-----e~---------- 309 (456)
T 2vdc_G 245 KVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQR-----EV---------- 309 (456)
T ss_dssp HHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHH-----HH----------
T ss_pred hhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHH-----HH----------
Confidence 00 123578999999999999999999999987 599999988332332211 10
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCe---------
Q 035488 236 WLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGK--------- 304 (408)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~--------- 304 (408)
+.+.+.+|+++.+ ++++.+++
T Consensus 310 ------------------------------------------------~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~ 341 (456)
T 2vdc_G 310 ------------------------------------------------AHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVR 341 (456)
T ss_dssp ------------------------------------------------HHHHHTTCEEECCSSSCCEEEEEEEETTEEEE
T ss_pred ------------------------------------------------HHHHHCCCEEEeCCCceEEeCCCcEEEEEEEE
Confidence 0111122333322 22222110
Q ss_pred -------------EEEecC--cEEccCEEEEcCCCCCCCCC-ccccccc-ccCCCCCCCCCCCCCCCCCceEEEeecccc
Q 035488 305 -------------VELVNG--QVLEIDSVVLATGYRSNVPS-WLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRG 367 (408)
Q Consensus 305 -------------v~~~~g--~~~~~D~vi~atG~~~~~~~-l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~ 367 (408)
....+| +++++|.||+|+|+.|+... +++..++ .+.+|++.+|...++|+.|+|||+||+..+
T Consensus 342 ~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g 421 (456)
T 2vdc_G 342 IHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRG 421 (456)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSS
T ss_pred EEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCC
Confidence 111123 47899999999999998733 6777776 577899999854478999999999999876
Q ss_pred Cc---cchhhHHHHHHHHHHHhhHHh
Q 035488 368 LS---GASLDAMSVALDIAKSWKEET 390 (408)
Q Consensus 368 ~~---~a~~~a~~~a~~i~~~~~~~~ 390 (408)
+. .|+.+|+.+|.+|.+.+.++.
T Consensus 422 ~~~v~~A~~~G~~aA~~i~~~L~~~~ 447 (456)
T 2vdc_G 422 ASLVVWAIRDGRDAAEGIHAYAKAKA 447 (456)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 54 689999999999999998744
No 56
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.97 E-value=5.8e-32 Score=263.07 Aligned_cols=291 Identities=15% Similarity=0.117 Sum_probs=192.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCC-CCCeeee--------c--CCccccCCC-CCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRT-YDRLKLH--------L--PKQFCQLPN-FPFPEDF 86 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~-~~~~~~~--------~--~~~~~~~~~-~~~~~~~ 86 (408)
.+||+||||||+|+++|..|++.|++|+|||+.+.+||+|.... .+...+. . ....+.++. .....++
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 36899999999999999999999999999999888988763210 0000000 0 000000000 0000000
Q ss_pred ------------------CCCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEE------EEeCEEEEeeC
Q 035488 87 ------------------PRVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVE------YICRWLVVATG 142 (408)
Q Consensus 87 ------------------~~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~------i~ad~vViAtG 142 (408)
...+.+.+++++.++.+.. +. +.+.|++.++. . .+ +.||+||+|||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~---~~--~~v~V~~~~G~--~---~~~~~~~~i~~d~lViAtG 154 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE---DE--TKIRVTPVDGL--E---GTVKEDHILDVKNIIVATG 154 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES---SS--SEEEEECCTTC--T---TCCSSCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc---cC--CeEEEEecCCC--c---ccccccceEEeCEEEECcC
Confidence 0112245677777665531 22 45555544331 1 24 99999999999
Q ss_pred CCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCch
Q 035488 143 ENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKST 222 (408)
Q Consensus 143 ~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~ 222 (408)
+ .|. .+||.+.....+.+..+...... .+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+.
T Consensus 155 s--~p~--~~~g~~~~~~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~---- 224 (478)
T 1v59_A 155 S--EVT--PFPGIEIDEEKIVSSTGALSLKE-IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP-QIGASMDG---- 224 (478)
T ss_dssp E--EEC--CCTTCCCCSSSEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSSSSCH----
T ss_pred C--CCC--CCCCCCCCCceEEcHHHHHhhhc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-ccccccCH----
Confidence 4 442 34554321113445444433322 57999999999999999999999999999999988 56553332
Q ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEE
Q 035488 223 FQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKF 300 (408)
Q Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~ 300 (408)
++...+ .+.+++.+|+++.+ +.++
T Consensus 225 -~~~~~l-----------------------------------------------------~~~l~~~gv~i~~~~~v~~i 250 (478)
T 1v59_A 225 -EVAKAT-----------------------------------------------------QKFLKKQGLDFKLSTKVISA 250 (478)
T ss_dssp -HHHHHH-----------------------------------------------------HHHHHHTTCEEECSEEEEEE
T ss_pred -HHHHHH-----------------------------------------------------HHHHHHCCCEEEeCCEEEEE
Confidence 222221 23344567888876 7777
Q ss_pred eC--C----eEEEe-----cCcEEccCEEEEcCCCCCCCCC-ccccccc-ccCCCCCCCCCCCCCCCCCceEEEeecccc
Q 035488 301 SP--G----KVELV-----NGQVLEIDSVVLATGYRSNVPS-WLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRG 367 (408)
Q Consensus 301 ~~--~----~v~~~-----~g~~~~~D~vi~atG~~~~~~~-l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~ 367 (408)
+. + .+.+. +++++++|.||+|+|++|++.. +++..++ .+.+|++.+| +.++|+.|+|||+|||+..
T Consensus 251 ~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~ 329 (478)
T 1v59_A 251 KRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVID-DQFNSKFPHIKVVGDVTFG 329 (478)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCC-TTSBCSSTTEEECGGGSSS
T ss_pred EEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeEC-cCCccCCCCEEEeeccCCC
Confidence 64 2 24554 4568999999999999999843 5677777 4568999988 5677999999999999876
Q ss_pred Cc---cchhhHHHHHHHHHH
Q 035488 368 LS---GASLDAMSVALDIAK 384 (408)
Q Consensus 368 ~~---~a~~~a~~~a~~i~~ 384 (408)
+. .|..||+.+|.+|.+
T Consensus 330 ~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 330 PMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHcC
Confidence 54 688999999999986
No 57
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=7.4e-32 Score=261.86 Aligned_cols=291 Identities=15% Similarity=0.151 Sum_probs=196.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCC-CCCeee-ecC---------CccccCCCCCCCCCC-
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRT-YDRLKL-HLP---------KQFCQLPNFPFPEDF- 86 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~-~~~~~~-~~~---------~~~~~~~~~~~~~~~- 86 (408)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|.... .+...+ ... ...+..+......++
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLA 85 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 57999999999999999999999999999999988999774210 000000 000 000000000000000
Q ss_pred -----------------CCCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 87 -----------------PRVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 87 -----------------~~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
..++.+.+++++.++.+. ++ . +.+.|++.++ .. ..++||+||+||| +.|..
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~--~--~~~~v~~~~G--~~---~~i~~d~lIiAtG--s~p~~ 153 (470)
T 1dxl_A 86 AMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-VS--P--SEISVDTIEG--EN---TVVKGKHIIIATG--SDVKS 153 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-EE--T--TEEEECCSSS--CC---EEEECSEEEECCC--EEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ec--C--CEEEEEeCCC--ce---EEEEcCEEEECCC--CCCCC
Confidence 011224567777766543 32 2 4454544332 12 5799999999999 67788
Q ss_pred CCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHH
Q 035488 150 PEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLM 229 (408)
Q Consensus 150 p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~ 229 (408)
|+++|.+. ..+++..+..... ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++|..+. ++...+
T Consensus 154 p~~~g~~~--~~v~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~-----~~~~~l 224 (470)
T 1dxl_A 154 LPGVTIDE--KKIVSSTGALALS-EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS-EIVPTMDA-----EIRKQF 224 (470)
T ss_dssp BTTBCCCS--SSEECHHHHTTCS-SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCH-----HHHHHH
T ss_pred CCCCCCCc--ccEEeHHHhhhhh-hcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-cccccccH-----HHHHHH
Confidence 88887643 1345554444332 257999999999999999999999999999999988 55554332 222221
Q ss_pred HhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCe---
Q 035488 230 MKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGK--- 304 (408)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~--- 304 (408)
.+.+++.+|+++.+ +.+++.+.
T Consensus 225 -----------------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~~~~~ 251 (470)
T 1dxl_A 225 -----------------------------------------------------QRSLEKQGMKFKLKTKVVGVDTSGDGV 251 (470)
T ss_dssp -----------------------------------------------------HHHHHHSSCCEECSEEEEEEECSSSSE
T ss_pred -----------------------------------------------------HHHHHHcCCEEEeCCEEEEEEEcCCeE
Confidence 23344557777776 77776532
Q ss_pred -EEEe---cC--cEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---cchh
Q 035488 305 -VELV---NG--QVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GASL 373 (408)
Q Consensus 305 -v~~~---~g--~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~ 373 (408)
+.+. +| +++++|.||+|+|++|++..+ ++..++ .+.+|++.+| +.++|+.|+|||+|||+..+. .|..
T Consensus 252 ~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~ 330 (470)
T 1dxl_A 252 KLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVN-ERFSTNVSGVYAIGDVIPGPMLAHKAEE 330 (470)
T ss_dssp EEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCC-TTCBCSSTTEEECSTTSSSCCCHHHHHH
T ss_pred EEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeEC-cCCccCCCCEEEEeccCCCCccHHHHHH
Confidence 3443 45 689999999999999998333 666677 4567999988 467899999999999987644 6789
Q ss_pred hHHHHHHHHHH
Q 035488 374 DAMSVALDIAK 384 (408)
Q Consensus 374 ~a~~~a~~i~~ 384 (408)
||+.+|.+|.+
T Consensus 331 ~g~~aa~~i~g 341 (470)
T 1dxl_A 331 DGVACVEYLAG 341 (470)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999999986
No 58
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.97 E-value=1.3e-31 Score=260.41 Aligned_cols=292 Identities=17% Similarity=0.172 Sum_probs=189.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-------CCCCeee-------ec---CCccccCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-------TYDRLKL-------HL---PKQFCQLPNFP 81 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-------~~~~~~~-------~~---~~~~~~~~~~~ 81 (408)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.+... ..+...+ .. ....+......
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~~ 82 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGE 82 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 4799999999999999999999999999999997554433211 0000000 00 00000000000
Q ss_pred CCCCCCC------------------CCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 82 FPEDFPR------------------VPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 82 ~~~~~~~------------------~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
...++.. +..+.++++..+..+ .+ +. ..+.|...+ +.. ..+.||+||+|||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~-~~--~~--~~~~v~~~~--g~~---~~~~~d~lvlAtG- 151 (476)
T 3lad_A 83 VAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGK-LL--AG--KKVEVTAAD--GSS---QVLDTENVILASG- 151 (476)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEE-EC--ST--TCEEEECTT--SCE---EEECCSCEEECCC-
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Ee--cC--CEEEEEcCC--Cce---EEEEcCEEEEcCC-
Confidence 0001000 011234444443322 22 22 444454332 222 5799999999999
Q ss_pred CCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchH
Q 035488 144 NAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTF 223 (408)
Q Consensus 144 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~ 223 (408)
+.|..|+.++... ..+++..+.... ...+++++|||+|.+|+|+|..|...|.+|+++.+.+ +++|..+.
T Consensus 152 -~~p~~~~~~~~~~--~~v~~~~~~~~~-~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~----- 221 (476)
T 3lad_A 152 -SKPVEIPPAPVDQ--DVIVDSTGALDF-QNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD-KFLPAVDE----- 221 (476)
T ss_dssp -EEECCCTTSCCCS--SSEEEHHHHTSC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCH-----
T ss_pred -CCCCCCCCCCCCc--ccEEechhhhcc-ccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC-CcCcccCH-----
Confidence 5666555444322 234554444333 3468999999999999999999999999999999988 56554332
Q ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEe
Q 035488 224 QLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFS 301 (408)
Q Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~ 301 (408)
++...+ .+.+++.+|+++.+ +.+++
T Consensus 222 ~~~~~l-----------------------------------------------------~~~l~~~Gv~v~~~~~v~~i~ 248 (476)
T 3lad_A 222 QVAKEA-----------------------------------------------------QKILTKQGLKILLGARVTGTE 248 (476)
T ss_dssp HHHHHH-----------------------------------------------------HHHHHHTTEEEEETCEEEEEE
T ss_pred HHHHHH-----------------------------------------------------HHHHHhCCCEEEECCEEEEEE
Confidence 222221 23345567888876 77776
Q ss_pred CC--e--EEEecC---cEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---
Q 035488 302 PG--K--VELVNG---QVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS--- 369 (408)
Q Consensus 302 ~~--~--v~~~~g---~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~--- 369 (408)
.+ . +.+.++ +++++|.||+|+|++|++..+ ++..++ .+++|++.+| +.++|+.|+|||+|||++.+.
T Consensus 249 ~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~ 327 (476)
T 3lad_A 249 VKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVD-DYCATSVPGVYAIGDVVRGAMLAH 327 (476)
T ss_dssp ECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCC-TTSBCSSTTEEECGGGSSSCCCHH
T ss_pred EcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeC-CCcccCCCCEEEEEccCCCcccHH
Confidence 33 2 556654 679999999999999998554 666676 5668999988 567899999999999996554
Q ss_pred cchhhHHHHHHHHHHH
Q 035488 370 GASLDAMSVALDIAKS 385 (408)
Q Consensus 370 ~a~~~a~~~a~~i~~~ 385 (408)
.|..||+.+|.+|.+.
T Consensus 328 ~A~~~g~~aa~~i~g~ 343 (476)
T 3lad_A 328 KASEEGVVVAERIAGH 343 (476)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCC
Confidence 7889999999999864
No 59
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.97 E-value=3.5e-32 Score=264.32 Aligned_cols=287 Identities=16% Similarity=0.232 Sum_probs=193.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCC-CccCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVP-HQFDI 95 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 95 (408)
++||+|||||++|+++|..|++. |.+|+|||+++.++.... ++............ .......+.+ +++++
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-----~~~~~~~~~~~~~~--~l~~~~~~~~~~~~gv 108 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC-----GLPYVISGAIASTE--KLIARNVKTFRDKYGI 108 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG-----GHHHHHTTSSSCGG--GGBSSCHHHHHHTTCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC-----CcchhhcCCcCCHH--HhhhcCHHHHHhhcCC
Confidence 46999999999999999999997 899999999886542110 00000000000000 0000001111 24478
Q ss_pred cccccceeEEEEEcCCCCcEEEEEee-cCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCC--
Q 035488 96 NPRFNETVQSAKYDETFGFWRIKTIS-SSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGA-- 172 (408)
Q Consensus 96 ~~~~~~~V~~i~~~~~~~~~~V~~~~-~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~-- 172 (408)
+++++++|+.++... +. |++.+ .++.. .++.||+||+||| +.|..|++||.+.. .+++.....+..
T Consensus 109 ~~~~~~~v~~i~~~~--~~--v~v~~~~~g~~---~~~~~d~lviAtG--~~p~~p~i~G~~~~--~v~~~~~~~~~~~l 177 (480)
T 3cgb_A 109 DAKVRHEVTKVDTEK--KI--VYAEHTKTKDV---FEFSYDRLLIATG--VRPVMPEWEGRDLQ--GVHLLKTIPDAERI 177 (480)
T ss_dssp EEESSEEEEEEETTT--TE--EEEEETTTCCE---EEEECSEEEECCC--EEECCCCCBTTTSB--TEECCSSHHHHHHH
T ss_pred EEEeCCEEEEEECCC--CE--EEEEEcCCCce---EEEEcCEEEECCC--CcccCCCCCCccCC--CEEEeCCHHHHHHH
Confidence 888889999998765 55 44443 11111 3799999999999 77888888887531 233322221110
Q ss_pred -----CCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHH
Q 035488 173 -----SYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILAR 247 (408)
Q Consensus 173 -----~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (408)
...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .+++.... ++...
T Consensus 178 ~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~------------------- 232 (480)
T 3cgb_A 178 LKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND-HIGTIYDG-----DMAEY------------------- 232 (480)
T ss_dssp HHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG-GTTSSSCH-----HHHHH-------------------
T ss_pred HHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-chhhcCCH-----HHHHH-------------------
Confidence 1268999999999999999999999999999999887 44442221 11111
Q ss_pred HHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCe-E--EEecCcEEccCEEEEcC
Q 035488 248 LILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGK-V--ELVNGQVLEIDSVVLAT 322 (408)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~-v--~~~~g~~~~~D~vi~at 322 (408)
+.+.+++.+|+++.+ +.+++.++ + ...++.++++|.||+|+
T Consensus 233 ----------------------------------l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~D~vi~a~ 278 (480)
T 3cgb_A 233 ----------------------------------IYKEADKHHIEILTNENVKAFKGNERVEAVETDKGTYKADLVLVSV 278 (480)
T ss_dssp ----------------------------------HHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTEEEECSEEEECS
T ss_pred ----------------------------------HHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCCEEEcCEEEECc
Confidence 123344557777765 67776432 2 23456689999999999
Q ss_pred CCCCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeecccc-------------CccchhhHHHHHHHHHH
Q 035488 323 GYRSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRG-------------LSGASLDAMSVALDIAK 384 (408)
Q Consensus 323 G~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~-------------~~~a~~~a~~~a~~i~~ 384 (408)
|++|+. .+++..++ .+.+|++.+| +.++|+.|+|||+|||+.. ...|..||+.+|.+|.+
T Consensus 279 G~~p~~-~~l~~~g~~~~~~G~I~Vd-~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 352 (480)
T 3cgb_A 279 GVKPNT-DFLEGTNIRTNHKGAIEVN-AYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLD 352 (480)
T ss_dssp CEEESC-GGGTTSCCCBCTTSCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCcCh-HHHHhCCcccCCCCCEEEC-CCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcC
Confidence 999998 67777776 4667899988 5678999999999999842 12688999999999975
No 60
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=1.3e-31 Score=258.78 Aligned_cols=288 Identities=18% Similarity=0.235 Sum_probs=193.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeee-e-------c-CCccccCCCCCCCCCC--
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKL-H-------L-PKQFCQLPNFPFPEDF-- 86 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~-~-------~-~~~~~~~~~~~~~~~~-- 86 (408)
.+||+|||||++|+++|..|++.|++|+|||++ .+||.|... ..+...+ . . ....+..+......++
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 468999999999999999999999999999998 788866321 0000000 0 0 0000000000000000
Q ss_pred ----------------CCCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCC
Q 035488 87 ----------------PRVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEP 150 (408)
Q Consensus 87 ----------------~~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p 150 (408)
..+..+.+++++.++.+. ++ . +.+.|++.++ ..++.||+||+||| +.|..|
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-id--~--~~v~V~~~~G------~~~i~~d~lViATG--s~p~~~ 148 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-VD--A--NTVRVVNGDS------AQTYTFKNAIIATG--SRPIEL 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-EE--T--TEEEEEETTE------EEEEECSEEEECCC--EEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-cc--C--CeEEEEeCCC------cEEEEeCEEEEecC--CCCCCC
Confidence 011224567777766543 32 2 4555655432 14799999999999 677888
Q ss_pred CCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHH
Q 035488 151 EFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMM 230 (408)
Q Consensus 151 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~ 230 (408)
+++|.+. .+++..+..... ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+ .++|..+. ++...+
T Consensus 149 ~~~g~~~---~v~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~~~l- 217 (455)
T 1ebd_A 149 PNFKFSN---RILDSTGALNLG-EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG-EILSGFEK-----QMAAII- 217 (455)
T ss_dssp TTBCCCS---SEECHHHHHTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCH-----HHHHHH-
T ss_pred CCCCccc---eEecHHHHhccc-cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-ccccccCH-----HHHHHH-
Confidence 8877543 244444433322 257999999999999999999999999999999988 55553322 222211
Q ss_pred hhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC--CeE-
Q 035488 231 KYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP--GKV- 305 (408)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--~~v- 305 (408)
.+.+++.+|+++.+ +.+++. +.+
T Consensus 218 ----------------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~~~~~~ 245 (455)
T 1ebd_A 218 ----------------------------------------------------KKRLKKKGVEVVTNALAKGAEEREDGVT 245 (455)
T ss_dssp ----------------------------------------------------HHHHHHTTCEEEESEEEEEEEEETTEEE
T ss_pred ----------------------------------------------------HHHHHHCCCEEEeCCEEEEEEEeCCeEE
Confidence 22334557777776 777753 233
Q ss_pred -EEe---cCcEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---cchhhHH
Q 035488 306 -ELV---NGQVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GASLDAM 376 (408)
Q Consensus 306 -~~~---~g~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~~a~ 376 (408)
.+. +++++++|.||+|+|++|+...+ ++..++ .+++|++.+| +.++|+.|+|||+|||+..+. .|..||+
T Consensus 246 v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~ 324 (455)
T 1ebd_A 246 VTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVD-QQCRTSVPNIFAIGDIVPGPALAHKASYEGK 324 (455)
T ss_dssp EEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCC-TTCBCSSTTEEECGGGSSSCCCHHHHHHHHH
T ss_pred EEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeC-CCcccCCCCEEEEeccCCCcccHHHHHHHHH
Confidence 333 45689999999999999998333 566666 4567999988 467899999999999987654 6889999
Q ss_pred HHHHHHHH
Q 035488 377 SVALDIAK 384 (408)
Q Consensus 377 ~~a~~i~~ 384 (408)
.+|.+|.+
T Consensus 325 ~aa~~i~~ 332 (455)
T 1ebd_A 325 VAAEAIAG 332 (455)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHcC
Confidence 99999986
No 61
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.97 E-value=1.5e-32 Score=267.34 Aligned_cols=290 Identities=14% Similarity=0.105 Sum_probs=194.7
Q ss_pred cCCcEEECCChHHHHHHHHHHH-cCCCEEEEe--------cCCCCCCccCC-CCCCCeeeec---------CCccccCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN-QGVPFIILE--------RANCIASLWQN-RTYDRLKLHL---------PKQFCQLPN 79 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~-~g~~v~lie--------~~~~~gg~w~~-~~~~~~~~~~---------~~~~~~~~~ 79 (408)
.+||+||||||+|+++|..|++ .|++|+||| +...+||+|.. ...+...+.. ....+.+..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 4689999999999999999999 999999999 35678886632 1111000000 000000000
Q ss_pred CCC--CCCCC------------------CCCCcc-CccccccceeEEEEEcCCCCcEEEEEee---cCCCCcceEEEEeC
Q 035488 80 FPF--PEDFP------------------RVPHQF-DINPRFNETVQSAKYDETFGFWRIKTIS---SSDSSFCEVEYICR 135 (408)
Q Consensus 80 ~~~--~~~~~------------------~~~~~~-~~~~~~~~~V~~i~~~~~~~~~~V~~~~---~~~~~~~~~~i~ad 135 (408)
... ..++. ..+.+. +++++.++ +..++. +. +++.+ .++.. ...+.||
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~~----~~--v~v~~~~~~~g~~--~~~~~~d 153 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGF-GALQDN----HT--VLVRESADPNSAV--LETLDTE 153 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESE-EEEEET----TE--EEEESSSSTTSCE--EEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeE-EEEeeC----CE--EEEEeeccCCCCc--eEEEEcC
Confidence 000 00110 011234 66666654 555542 33 44432 11110 0479999
Q ss_pred EEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhcc---CCccEEEEecCcee
Q 035488 136 WLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNH---NAKPSMVVRSSVHV 212 (408)
Q Consensus 136 ~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~---g~~V~~~~r~~~~~ 212 (408)
+||+||| +.|..|++||.+. +++..+.... ...+++++|||+|.+|+|+|..|.+. |.+|+++++.+ ++
T Consensus 154 ~lviAtG--s~p~~p~i~g~~~----~~~~~~~~~~-~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~-~~ 225 (490)
T 1fec_A 154 YILLATG--SWPQHLGIEGDDL----CITSNEAFYL-DEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD-MI 225 (490)
T ss_dssp EEEECCC--EEECCCCSBTGGG----CBCHHHHTTC-SSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS-SS
T ss_pred EEEEeCC--CCCCCCCCCCccc----eecHHHHhhh-hhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC-Cc
Confidence 9999999 7788888888642 2333333322 23578999999999999999999999 99999999998 55
Q ss_pred ecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeE
Q 035488 213 LPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIK 292 (408)
Q Consensus 213 ~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 292 (408)
+|..+. ++...+ .+.+++.+|+
T Consensus 226 l~~~d~-----~~~~~l-----------------------------------------------------~~~l~~~GV~ 247 (490)
T 1fec_A 226 LRGFDS-----ELRKQL-----------------------------------------------------TEQLRANGIN 247 (490)
T ss_dssp STTSCH-----HHHHHH-----------------------------------------------------HHHHHHTTEE
T ss_pred ccccCH-----HHHHHH-----------------------------------------------------HHHHHhCCCE
Confidence 554332 222221 2334556788
Q ss_pred EecC--ccEEeCC-----eEEEecCcEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEee
Q 035488 293 VVPG--IKKFSPG-----KVELVNGQVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGF 363 (408)
Q Consensus 293 ~~~~--i~~~~~~-----~v~~~~g~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd 363 (408)
++.+ +.+++.+ .+.+.+|+++++|.||+|+|++|++..| ++..++ .+.+|++.+| +.++|+.|+|||+||
T Consensus 248 i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd-~~~~t~~~~IyA~GD 326 (490)
T 1fec_A 248 VRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVD-AYSKTNVDNIYAIGD 326 (490)
T ss_dssp EEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCC-TTCBCSSTTEEECGG
T ss_pred EEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEEC-CCCccCCCCEEEEec
Confidence 8876 7777642 3667788899999999999999998545 677777 4568999988 567899999999999
Q ss_pred ccccCc---cchhhHHHHHHHHHH
Q 035488 364 TKRGLS---GASLDAMSVALDIAK 384 (408)
Q Consensus 364 ~~~~~~---~a~~~a~~~a~~i~~ 384 (408)
|++.+. .|..||+.+|.+|.+
T Consensus 327 ~~~~~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 327 VTDRVMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp GGCSCCCHHHHHHHHHHHHHHHHS
T ss_pred cCCCccCHHHHHHHHHHHHHHhcC
Confidence 997543 678999999999986
No 62
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.97 E-value=1.3e-32 Score=265.94 Aligned_cols=283 Identities=18% Similarity=0.209 Sum_probs=190.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeeee--------c-CCccccCCCCCCCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKLH--------L-PKQFCQLPNFPFPEDFPR 88 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~ 88 (408)
.+||+|||||++|+++|..|++.|++|+|||++ .+||+|... ..+...+. . ....+.+.......++..
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPR 82 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHH
Confidence 468999999999999999999999999999998 688876421 00000000 0 000001100000001100
Q ss_pred ------------------CCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCC
Q 035488 89 ------------------VPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEP 150 (408)
Q Consensus 89 ------------------~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p 150 (408)
.+.+.+++++.+ ++..++ . . +|++ ++ .++.||+||+||| +.|..|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~--~--~v~~-~g-------~~~~~d~lviAtG--s~p~~p 145 (463)
T 2r9z_A 83 LVAGRDRYIGAINSFWDGYVERLGITRVDG-HARFVD--A--H--TIEV-EG-------QRLSADHIVIATG--GRPIVP 145 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--T--T--EEEE-TT-------EEEEEEEEEECCC--EEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEe-EEEEcc--C--C--EEEE-CC-------EEEEcCEEEECCC--CCCCCC
Confidence 011345555554 333333 1 2 3555 32 5799999999999 678888
Q ss_pred CCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHH
Q 035488 151 EFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMM 230 (408)
Q Consensus 151 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~ 230 (408)
++||.+. +++..++... ...+++++|||+|.+|+|+|..|.+.|.+|+++++++ .+++..+. ++...+
T Consensus 146 ~i~G~~~----~~~~~~~~~~-~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~-~~l~~~~~-----~~~~~l- 213 (463)
T 2r9z_A 146 RLPGAEL----GITSDGFFAL-QQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED-RLLFQFDP-----LLSATL- 213 (463)
T ss_dssp SCTTGGG----SBCHHHHHHC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHHHHH-
T ss_pred CCCCccc----eecHHHHhhh-hccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccccccCH-----HHHHHH-
Confidence 8888632 2333222222 2257899999999999999999999999999999987 44443221 222111
Q ss_pred hhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC----e
Q 035488 231 KYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG----K 304 (408)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~----~ 304 (408)
.+.+++.+|+++.+ +.+++.+ .
T Consensus 214 ----------------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~~~~~~ 241 (463)
T 2r9z_A 214 ----------------------------------------------------AENMHAQGIETHLEFAVAALERDAQGTT 241 (463)
T ss_dssp ----------------------------------------------------HHHHHHTTCEEESSCCEEEEEEETTEEE
T ss_pred ----------------------------------------------------HHHHHHCCCEEEeCCEEEEEEEeCCeEE
Confidence 23344567888776 7777642 4
Q ss_pred EEEecCc-EEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---cchhhHHHH
Q 035488 305 VELVNGQ-VLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GASLDAMSV 378 (408)
Q Consensus 305 v~~~~g~-~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~~a~~~ 378 (408)
+.+.+|+ ++++|.||+|+|++|++..+ ++..++ .+.+|++.+| +.++|+.|+|||+|||+..+. .|..||+.+
T Consensus 242 v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~a 320 (463)
T 2r9z_A 242 LVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTD-AYQNTNVPGVYALGDITGRDQLTPVAIAAGRRL 320 (463)
T ss_dssp EEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCC-TTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHH
T ss_pred EEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeEC-CCCccCCCCEEEEeecCCCcccHHHHHHHHHHH
Confidence 6777898 89999999999999998434 455566 4668999988 467899999999999987543 678999999
Q ss_pred HHHHHH
Q 035488 379 ALDIAK 384 (408)
Q Consensus 379 a~~i~~ 384 (408)
|.+|.+
T Consensus 321 a~~i~g 326 (463)
T 2r9z_A 321 AERLFD 326 (463)
T ss_dssp HHHHHS
T ss_pred HHHHcC
Confidence 999986
No 63
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.97 E-value=1.1e-32 Score=267.91 Aligned_cols=291 Identities=16% Similarity=0.126 Sum_probs=190.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|||||||+||+++|..|++.+++|+|||+++.+ .|.++................+........+.++++.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~-------~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~ 114 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF-------LFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYY 114 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE-------ECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc-------ccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEE
Confidence 568999999999999999999999999999998742 2333222111111110000000000000112244443
Q ss_pred ccceeEEEEEcCCCCcEEEEEeec----------------CCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceee
Q 035488 99 FNETVQSAKYDETFGFWRIKTISS----------------SDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNV 162 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~----------------~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~ 162 (408)
..+|++|+.+. +. |++.+. .+.. .++.||+|||||| +.+..+.+||..++.
T Consensus 115 -~~~v~~ID~~~--k~--V~l~~~~~~~~~~~~~~~~~~~~~~~---~~i~YD~LViAtG--s~~~~~~ipG~~e~a--- 181 (502)
T 4g6h_A 115 -EAEATSINPDR--NT--VTIKSLSAVSQLYQPENHLGLHQAEP---AEIKYDYLISAVG--AEPNTFGIPGVTDYG--- 181 (502)
T ss_dssp -EEEEEEEEGGG--TE--EEEEEEEEEEECSSSCCCCCCCTTCC---EEEECSEEEECCC--CEECCTTCTTHHHHC---
T ss_pred -EEEEEEEEhhh--CE--EEEeecccceeecccccccccccCCc---eEEeCCEEEEcCC--cccccCCccCccccc---
Confidence 36889998776 55 443321 1112 6899999999999 788888999975422
Q ss_pred eeccCCCCC----------------------CCCCCCeEEEEccCCcHHHHHHHHhccC--------------CccEEEE
Q 035488 163 MHAGDYKSG----------------------ASYRGKRVLVVGCGNSGMEVSLDLCNHN--------------AKPSMVV 206 (408)
Q Consensus 163 ~~~~~~~~~----------------------~~~~~~~v~VvG~G~~a~e~a~~l~~~g--------------~~V~~~~ 206 (408)
+......+. ......+++|||+|.+|+|+|.+|++.+ .+|++++
T Consensus 182 ~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve 261 (502)
T 4g6h_A 182 HFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVE 261 (502)
T ss_dssp EECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEec
Confidence 111111000 0012347999999999999999998643 5799999
Q ss_pred ecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhh
Q 035488 207 RSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKI 286 (408)
Q Consensus 207 r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (408)
+.+ .++|.... ++...+ .+.+
T Consensus 262 ~~~-~il~~~~~-----~~~~~~-----------------------------------------------------~~~L 282 (502)
T 4g6h_A 262 ALP-IVLNMFEK-----KLSSYA-----------------------------------------------------QSHL 282 (502)
T ss_dssp SSS-SSSTTSCH-----HHHHHH-----------------------------------------------------HHHH
T ss_pred ccc-ccccCCCH-----HHHHHH-----------------------------------------------------HHHH
Confidence 888 66665443 333322 2334
Q ss_pred ccCCeEEecC--ccEEeCCeEEEe----cC----cEEccCEEEEcCCCCCCC--CCccccccc-ccCCCCCCCCCCCCCC
Q 035488 287 RSGDIKVVPG--IKKFSPGKVELV----NG----QVLEIDSVVLATGYRSNV--PSWLKENEF-FSENGIPKNPFPNGWK 353 (408)
Q Consensus 287 ~~~~i~~~~~--i~~~~~~~v~~~----~g----~~~~~D~vi~atG~~~~~--~~l~~~~~~-~~~~g~~~~~~~~~~t 353 (408)
++.+|+++.+ +++++++++.+. || +++++|+||||+|.+|+. ..+....+. .+.+|++.+|..++.+
T Consensus 283 ~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~ 362 (502)
T 4g6h_A 283 ENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVK 362 (502)
T ss_dssp HHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBT
T ss_pred HhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCccccC
Confidence 5668999888 899998876543 44 369999999999999984 123333334 4667888888544445
Q ss_pred CCCceEEEeeccccCc-----cchhhHHHHHHHHHHHhhH
Q 035488 354 GKTGLYAVGFTKRGLS-----GASLDAMSVALDIAKSWKE 388 (408)
Q Consensus 354 ~~~~iya~Gd~~~~~~-----~a~~~a~~~a~~i~~~~~~ 388 (408)
+.|+|||+|||+..+. .|..||+.+|+||.+..+.
T Consensus 363 ~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~~~~ 402 (502)
T 4g6h_A 363 GSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMAQI 402 (502)
T ss_dssp TCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHHhcc
Confidence 8999999999875322 6889999999999886543
No 64
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=1e-31 Score=259.04 Aligned_cols=286 Identities=16% Similarity=0.213 Sum_probs=194.0
Q ss_pred CCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
+||+|||||++|+++|..|++. |.+|+|||+++.++.. .. .+............ .......+++.+.++++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~--~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~gv~~ 73 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL--SA---GMQLYLEGKVKDVN--SVRYMTGEKMESRGVNV 73 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC--GG---GHHHHHTTSSCCGG--GSBSCCHHHHHHTTCEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc--cc---cchhhhcCccCCHH--HhhcCCHHHHHHCCCEE
Confidence 3799999999999999999998 8999999998866411 00 00000000000000 00001112233568888
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCC------
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSG------ 171 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~------ 171 (408)
+.+++|+.++... +. |++.+..+++ ..++.||+||+||| +.|..|++||.+. ..+++...+.+.
T Consensus 74 ~~~~~v~~i~~~~--~~--v~~~~~~~g~--~~~~~~d~lviAtG--~~p~~p~i~G~~~--~~v~~~~~~~~~~~l~~~ 143 (447)
T 1nhp_A 74 FSNTEITAIQPKE--HQ--VTVKDLVSGE--ERVENYDKLIISPG--AVPFELDIPGKDL--DNIYLMRGRQWAIKLKQK 143 (447)
T ss_dssp EETEEEEEEETTT--TE--EEEEETTTCC--EEEEECSEEEECCC--EEECCCCSTTTTS--BSEECCCHHHHHHHHHHH
T ss_pred EECCEEEEEeCCC--CE--EEEEecCCCc--eEEEeCCEEEEcCC--CCcCCCCCCCCCC--CCeEEECCHHHHHHHHHH
Confidence 8899999998665 55 5554311111 13689999999999 7788888998753 123443222111
Q ss_pred -CCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecc-cccCCchHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 035488 172 -ASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPR-EVLGKSTFQLAVLMMKYFPLWLVDKILLILARLI 249 (408)
Q Consensus 172 -~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 249 (408)
....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .+++. ... ++...
T Consensus 144 ~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~-----~~~~~--------------------- 196 (447)
T 1nhp_A 144 TVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD-RPLGVYLDK-----EFTDV--------------------- 196 (447)
T ss_dssp HTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTCCH-----HHHHH---------------------
T ss_pred hhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc-ccccccCCH-----HHHHH---------------------
Confidence 11267999999999999999999999999999999987 44442 111 11111
Q ss_pred hhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCe-E--EEecCcEEccCEEEEcCCC
Q 035488 250 LGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGK-V--ELVNGQVLEIDSVVLATGY 324 (408)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~-v--~~~~g~~~~~D~vi~atG~ 324 (408)
..+.+++.+|+++.+ +.+++.++ + ...+++++++|.||+|+|+
T Consensus 197 --------------------------------l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 197 --------------------------------LTEEMEANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGV 244 (447)
T ss_dssp --------------------------------HHHHHHTTTEEEEESCCEEEEECSSBCCEEEESSCEEECSEEEECSCE
T ss_pred --------------------------------HHHHHHhCCCEEEcCCEEEEEEccCcEEEEEECCCEEECCEEEECcCC
Confidence 123345567888876 77776542 2 2336678999999999999
Q ss_pred CCCCCCccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccC-------------ccchhhHHHHHHHHHH
Q 035488 325 RSNVPSWLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGL-------------SGASLDAMSVALDIAK 384 (408)
Q Consensus 325 ~~~~~~l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~-------------~~a~~~a~~~a~~i~~ 384 (408)
+|+. .+++.. + .+.+|++.+| +.++|+.|+|||+|||+... ..|..||+.+|.+|.+
T Consensus 245 ~p~~-~~~~~~-~~~~~~G~i~Vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 315 (447)
T 1nhp_A 245 RPNT-AWLKGT-LELHPNGLIKTD-EYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEE 315 (447)
T ss_dssp EESC-GGGTTT-SCBCTTSCBCCC-TTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred CCCh-HHHHhh-hhhcCCCcEEEC-ccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcC
Confidence 9998 566665 5 4568889888 56789999999999998521 2688999999999875
No 65
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.97 E-value=1.1e-31 Score=260.16 Aligned_cols=289 Identities=16% Similarity=0.165 Sum_probs=192.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCC-CCCeee---------ecCCccc-cCCCCCCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRT-YDRLKL---------HLPKQFC-QLPNFPFPEDFP 87 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~-~~~~~~---------~~~~~~~-~~~~~~~~~~~~ 87 (408)
.+||+|||||++|+++|..|++.|++|+|||++ .+||+|.... .+...+ .....++ .++......++.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRS 82 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCHH
Confidence 468999999999999999999999999999998 7888774210 000000 0000000 010000000100
Q ss_pred -------------------CCCCcc-CccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCC
Q 035488 88 -------------------RVPHQF-DINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEK 147 (408)
Q Consensus 88 -------------------~~~~~~-~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~ 147 (408)
.++.+. +++++.+ ++..++ . +.+.|.+.++ .. .++.||+||+||| +.|
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~--~--~~~~v~~~~g--~~---~~~~~d~lviAtG--s~p 150 (467)
T 1zk7_A 83 KLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKD--D--QSLTVRLNEG--GE---RVVMFDRCLVATG--ASP 150 (467)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEE--T--TEEEEEETTS--SE---EEEECSEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEcc--C--CEEEEEeCCC--ce---EEEEeCEEEEeCC--CCC
Confidence 111233 5555543 354443 2 4455555332 11 5799999999999 788
Q ss_pred CCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHH
Q 035488 148 IEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAV 227 (408)
Q Consensus 148 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~ 227 (408)
..|++||.+.. .+++..+.... ...+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++| .+. ++..
T Consensus 151 ~~p~i~G~~~~--~~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~~-----~~~~ 220 (467)
T 1zk7_A 151 AVPPIPGLKES--PYWTSTEALAS-DTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNT-LFFR-EDP-----AIGE 220 (467)
T ss_dssp CCCCCTTTTTS--CCBCHHHHHHC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTT-SCH-----HHHH
T ss_pred CCCCCCCCCcC--ceecHHHHhcc-cccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC-ccCC-CCH-----HHHH
Confidence 88999987542 23333333222 2357999999999999999999999999999999988 5555 221 2222
Q ss_pred HHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC--
Q 035488 228 LMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG-- 303 (408)
Q Consensus 228 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-- 303 (408)
.+ .+.+++.+|+++.+ +.+++.+
T Consensus 221 ~l-----------------------------------------------------~~~l~~~Gv~i~~~~~v~~i~~~~~ 247 (467)
T 1zk7_A 221 AV-----------------------------------------------------TAAFRAEGIEVLEHTQASQVAHMDG 247 (467)
T ss_dssp HH-----------------------------------------------------HHHHHHTTCEEETTCCEEEEEEETT
T ss_pred HH-----------------------------------------------------HHHHHhCCCEEEcCCEEEEEEEeCC
Confidence 21 23344557788776 6666532
Q ss_pred e--EEEecCcEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---cchhhHH
Q 035488 304 K--VELVNGQVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GASLDAM 376 (408)
Q Consensus 304 ~--v~~~~g~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~~a~ 376 (408)
. +.+ ++.++++|.||+|+|+.|+...+ ++..++ .+.+|++.+| +..+|+.|+|||+|||+..+. .|..||+
T Consensus 248 ~~~v~~-~~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~ 325 (467)
T 1zk7_A 248 EFVLTT-THGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVID-QGMRTSNPNIYAAGDCTDQPQFVYVAAAAGT 325 (467)
T ss_dssp EEEEEE-TTEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCC-TTCBCSSTTEEECSTTBSSCCCHHHHHHHHH
T ss_pred EEEEEE-CCcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHHHHH
Confidence 2 333 45689999999999999998433 456666 4567889888 567899999999999987654 6889999
Q ss_pred HHHHHHHHH
Q 035488 377 SVALDIAKS 385 (408)
Q Consensus 377 ~~a~~i~~~ 385 (408)
.+|.+|.+.
T Consensus 326 ~aa~~i~~~ 334 (467)
T 1zk7_A 326 RAAINMTGG 334 (467)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 999999753
No 66
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.97 E-value=1.6e-32 Score=266.18 Aligned_cols=289 Identities=16% Similarity=0.145 Sum_probs=193.9
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeeeecC----------CccccCCC-CCCCCCC-
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKLHLP----------KQFCQLPN-FPFPEDF- 86 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~~~~----------~~~~~~~~-~~~~~~~- 86 (408)
+||+|||||++|+++|..|++.|++|+|||+++.+||+|... ..+...+... ...+..+. .....++
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSA 82 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCHH
Confidence 689999999999999999999999999999998899876421 0110000000 00000000 0000000
Q ss_pred -----------------CCCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 87 -----------------PRVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 87 -----------------~~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
..++.+.+++++.++.+ .++ . +.+.|.+.++ .. .++.||+||+||| +.|..
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i~--~--~~~~v~~~~G--~~---~~~~~d~lviAtG--~~p~~ 150 (468)
T 2qae_A 83 KMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGS-FET--A--HSIRVNGLDG--KQ---EMLETKKTIIATG--SEPTE 150 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEE-EEE--T--TEEEEEETTS--CE---EEEEEEEEEECCC--EEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Eee--C--CEEEEEecCC--ce---EEEEcCEEEECCC--CCcCC
Confidence 01122446666665543 243 2 4455554332 11 5799999999999 67888
Q ss_pred CCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHH
Q 035488 150 PEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLM 229 (408)
Q Consensus 150 p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~ 229 (408)
|+++|.+.. .+++..+..... ..+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+. ++...
T Consensus 151 p~~~g~~~~--~v~t~~~~~~~~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~~~~~- 220 (468)
T 2qae_A 151 LPFLPFDEK--VVLSSTGALALP-RVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP-RCAPTLDE-----DVTNA- 220 (468)
T ss_dssp BTTBCCCSS--SEECHHHHHTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHHHH-
T ss_pred CCCCCCCcC--ceechHHHhhcc-cCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC-cccccCCH-----HHHHH-
Confidence 888876531 344544443332 257999999999999999999999999999999988 56554332 11111
Q ss_pred HhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhh-ccCCeEEecC--ccEEeCCe--
Q 035488 230 MKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKI-RSGDIKVVPG--IKKFSPGK-- 304 (408)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--i~~~~~~~-- 304 (408)
..+.+ ++.+|+++.+ +.+++.++
T Consensus 221 ----------------------------------------------------l~~~l~~~~gv~i~~~~~v~~i~~~~~~ 248 (468)
T 2qae_A 221 ----------------------------------------------------LVGALAKNEKMKFMTSTKVVGGTNNGDS 248 (468)
T ss_dssp ----------------------------------------------------HHHHHHHHTCCEEECSCEEEEEEECSSS
T ss_pred ----------------------------------------------------HHHHHhhcCCcEEEeCCEEEEEEEcCCe
Confidence 12334 5567888876 77776432
Q ss_pred --EEEe--cC--cEEccCEEEEcCCCCCCCCCc--cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccc-cCc---cc
Q 035488 305 --VELV--NG--QVLEIDSVVLATGYRSNVPSW--LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKR-GLS---GA 371 (408)
Q Consensus 305 --v~~~--~g--~~~~~D~vi~atG~~~~~~~l--~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~-~~~---~a 371 (408)
+.+. +| +++++|.||+|+|++|++ .+ ++..++ .+++|++.+| +.++|+.|+|||+|||+. .+. .|
T Consensus 249 ~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~-~~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~A 326 (468)
T 2qae_A 249 VSLEVEGKNGKRETVTCEALLVSVGRRPFT-GGLGLDKINVAKNERGFVKIG-DHFETSIPDVYAIGDVVDKGPMLAHKA 326 (468)
T ss_dssp EEEEEECC---EEEEEESEEEECSCEEECC-TTSCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGBSSSCSCHHHH
T ss_pred EEEEEEcCCCceEEEECCEEEECCCcccCC-CCCCchhcCCccCCCCCEeEC-CCcccCCCCEEEeeccCCCCCccHhHH
Confidence 4444 66 679999999999999998 54 566666 4567999988 567899999999999988 544 68
Q ss_pred hhhHHHHHHHHHH
Q 035488 372 SLDAMSVALDIAK 384 (408)
Q Consensus 372 ~~~a~~~a~~i~~ 384 (408)
..||+.+|.+|.+
T Consensus 327 ~~~g~~aa~~i~~ 339 (468)
T 2qae_A 327 EDEGVACAEILAG 339 (468)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 8999999999986
No 67
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.97 E-value=3e-32 Score=257.62 Aligned_cols=277 Identities=20% Similarity=0.224 Sum_probs=191.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCC-----CCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQG--VPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDF-----PRVPH 91 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g--~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 91 (408)
.+||+|||||++|+++|..|++.| .+|+++|+++ |..|....+.. . +.......++ ..+..
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~~-------~---~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLST-------G---FSKNKDADGLAMAEPGAMAE 71 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGGG-------T---TTTTCCHHHHEEECHHHHHH
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcccccH-------H---HhCCCCHHHhhccCHHHHHH
Confidence 468999999999999999999998 5689999876 22221110000 0 0000000011 11223
Q ss_pred ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCC
Q 035488 92 QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSG 171 (408)
Q Consensus 92 ~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~ 171 (408)
+.+++++.+++|+.++... . +|++.+ .++.||+||+||| +.|..|++||.+. ..+++...+.+.
T Consensus 72 ~~~v~~~~~~~v~~i~~~~--~--~v~~~~--------~~~~~d~lviAtG--~~p~~p~i~g~~~--~~v~~~~~~~~~ 135 (384)
T 2v3a_A 72 QLNARILTHTRVTGIDPGH--Q--RIWIGE--------EEVRYRDLVLAWG--AEPIRVPVEGDAQ--DALYPINDLEDY 135 (384)
T ss_dssp HTTCEEECSCCCCEEEGGG--T--EEEETT--------EEEECSEEEECCC--EEECCCCCBSTTT--TCEEECSSHHHH
T ss_pred hCCcEEEeCCEEEEEECCC--C--EEEECC--------cEEECCEEEEeCC--CCcCCCCCCCcCc--CCEEEECCHHHH
Confidence 5677888888898888654 3 366643 5799999999999 7788888888652 233443333221
Q ss_pred -----CCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHH
Q 035488 172 -----ASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILA 246 (408)
Q Consensus 172 -----~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 246 (408)
....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ ++++.... .++...
T Consensus 136 ~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~~~~----~~~~~~------------------ 192 (384)
T 2v3a_A 136 ARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE-QVMPGLLH----PAAAKA------------------ 192 (384)
T ss_dssp HHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTSC----HHHHHH------------------
T ss_pred HHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc-chhhcccC----HHHHHH------------------
Confidence 11248999999999999999999999999999999987 45443211 011111
Q ss_pred HHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC--C--eEEEecCcEEccCEEEE
Q 035488 247 RLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP--G--KVELVNGQVLEIDSVVL 320 (408)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--~--~v~~~~g~~~~~D~vi~ 320 (408)
+.+.+++.+++++.+ +.+++. + .+.+.+|+++++|.||+
T Consensus 193 -----------------------------------l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~ 237 (384)
T 2v3a_A 193 -----------------------------------VQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVS 237 (384)
T ss_dssp -----------------------------------HHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEE
T ss_pred -----------------------------------HHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEE
Confidence 123344557777766 677653 2 36777899999999999
Q ss_pred cCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccc--c-C----ccchhhHHHHHHHHHH
Q 035488 321 ATGYRSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKR--G-L----SGASLDAMSVALDIAK 384 (408)
Q Consensus 321 atG~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~--~-~----~~a~~~a~~~a~~i~~ 384 (408)
|+|+.|+. .+++..++..++| +.+| +.++|+.|+|||+|||+. + . ..|..||+.+|.+|.+
T Consensus 238 a~G~~p~~-~l~~~~g~~~~~g-i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g 305 (384)
T 2v3a_A 238 AVGLRPRT-ELAFAAGLAVNRG-IVVD-RSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAG 305 (384)
T ss_dssp CSCEEECC-HHHHHTTCCBSSS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTT
T ss_pred CcCCCcCH-HHHHHCCCCCCCC-EEEC-CCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcC
Confidence 99999998 5777777755567 7777 467799999999999974 2 1 1468899999999975
No 68
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=4e-32 Score=259.14 Aligned_cols=285 Identities=15% Similarity=0.130 Sum_probs=193.8
Q ss_pred cCCcEEECCChHHHHHHHHHHH---cCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN---QGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDI 95 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~---~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (408)
|++|+|||||++|+++|..|++ .|++|+|||+++.++.. ............ .......+.+.+.+.++
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~~~~~gv 71 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFR-------PALPHVAIGVRD--VDELKVDLSEALPEKGI 71 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEEC-------CSSCCCCSSCCC--CCCEEEEHHHHTGGGTC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceec-------cchhhcccCCcC--HHHHHHHHHHHHhhCCe
Confidence 3589999999999999999999 89999999999854311 100000000000 00000011223335678
Q ss_pred cccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCCC-
Q 035488 96 NPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGASY- 174 (408)
Q Consensus 96 ~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~- 174 (408)
+++.+ +|+.++.+. +. |++.++.+.. .++.||+||+||| ..|..|.+||.+. ...+.+.+.+....
T Consensus 72 ~~~~~-~v~~i~~~~--~~--V~~~~g~~~~---~~~~~d~lViAtG--~~~~~~~ipG~~~---~~~~~~~~~~~~~~~ 138 (409)
T 3h8l_A 72 QFQEG-TVEKIDAKS--SM--VYYTKPDGSM---AEEEYDYVIVGIG--AHLATELVKGWDK---YGYSVCEPEFATKLR 138 (409)
T ss_dssp EEEEC-EEEEEETTT--TE--EEEECTTSCE---EEEECSEEEECCC--CEECGGGSBTHHH---HCEESSSTTHHHHHH
T ss_pred EEEEe-eEEEEeCCC--CE--EEEccCCccc---ceeeCCEEEECCC--CCcCccCCCChhh---cCcCcCCHHHHHHHH
Confidence 88765 899988665 43 7776654333 5799999999999 6777778888764 22333333222111
Q ss_pred -----CCCeEEEEccC-------------------C------cHHHHHHH----HhccC----CccEEEEecCceeeccc
Q 035488 175 -----RGKRVLVVGCG-------------------N------SGMEVSLD----LCNHN----AKPSMVVRSSVHVLPRE 216 (408)
Q Consensus 175 -----~~~~v~VvG~G-------------------~------~a~e~a~~----l~~~g----~~V~~~~r~~~~~~p~~ 216 (408)
..++++|||+| . .++|+|.. +.+.| .+|+++++.+ .+|..
T Consensus 139 ~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~--~l~~~ 216 (409)
T 3h8l_A 139 EKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE--YLSDL 216 (409)
T ss_dssp HHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS--SSTTB
T ss_pred HHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc--ccccc
Confidence 12567799999 2 36787754 44566 3799998876 33322
Q ss_pred ccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC
Q 035488 217 VLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG 296 (408)
Q Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 296 (408)
.. ++...+ .+.+++.+|+++.+
T Consensus 217 ~~-----~~~~~~-----------------------------------------------------~~~l~~~gV~~~~~ 238 (409)
T 3h8l_A 217 SP-----NSRKAV-----------------------------------------------------ASIYNQLGIKLVHN 238 (409)
T ss_dssp CH-----HHHHHH-----------------------------------------------------HHHHHHHTCEEECS
T ss_pred CH-----HHHHHH-----------------------------------------------------HHHHHHCCCEEEcC
Confidence 21 222111 23344557888876
Q ss_pred --ccEEeCCeEEEecCcEEccCEEEEcCCCCCCCCCccccc--ccccCCCCCCCCCCCCCC-CCCceEEEeecccc--Cc
Q 035488 297 --IKKFSPGKVELVNGQVLEIDSVVLATGYRSNVPSWLKEN--EFFSENGIPKNPFPNGWK-GKTGLYAVGFTKRG--LS 369 (408)
Q Consensus 297 --i~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~l~~~~--~~~~~~g~~~~~~~~~~t-~~~~iya~Gd~~~~--~~ 369 (408)
|++++++++.+.+|+++++|.||+++|+.|+ .++... ++.+.+|++.+|. ..++ +.||||++||++.. +.
T Consensus 239 ~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~--~~l~~~~~~l~~~~G~i~vd~-~~~~~~~~~vfa~GD~~~~~~~~ 315 (409)
T 3h8l_A 239 FKIKEIREHEIVDEKGNTIPADITILLPPYTGN--PALKNSTPDLVDDGGFIPTDL-NMVSIKYDNVYAVGDANSMTVPK 315 (409)
T ss_dssp CCEEEECSSEEEETTSCEEECSEEEEECCEECC--HHHHTSCGGGSCTTSCBCBBT-TSBBSSCTTEEECGGGBTTCCSC
T ss_pred CceEEECCCeEEECCCCEEeeeEEEECCCCCcc--HHHHhccccCcCCCCCEEeCc-ccccCCCCCEEEeehhccCCCCc
Confidence 8999999999999999999999999999998 466665 5667889999985 5555 99999999999862 22
Q ss_pred ---cchhhHHHHHHHHHHHhhH
Q 035488 370 ---GASLDAMSVALDIAKSWKE 388 (408)
Q Consensus 370 ---~a~~~a~~~a~~i~~~~~~ 388 (408)
.|..||+.+|.+|.+.+..
T Consensus 316 ~~~~A~~q~~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 316 LGYLAVMTGRIAAQHLANRLGV 337 (409)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 6889999999999999843
No 69
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.97 E-value=1.4e-31 Score=259.18 Aligned_cols=284 Identities=16% Similarity=0.153 Sum_probs=190.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCC-CCCCCeeee----cCCccccCCCCCC-----CCCCC-
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQN-RTYDRLKLH----LPKQFCQLPNFPF-----PEDFP- 87 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~-~~~~~~~~~----~~~~~~~~~~~~~-----~~~~~- 87 (408)
.+||+||||||+|+++|..|+++|++|+|||+ +.+||+|.. ...+...+. ....+...+.+.+ ..++.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAK 83 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHH
Confidence 36999999999999999999999999999999 678886632 000000000 0000000000000 00000
Q ss_pred -----------------CCCCccCccccccceeEEEEEcCCCCcEEEEEe-ecCCCCcceEEEEeCEEEEeeCCCCCCC-
Q 035488 88 -----------------RVPHQFDINPRFNETVQSAKYDETFGFWRIKTI-SSSDSSFCEVEYICRWLVVATGENAEKI- 148 (408)
Q Consensus 88 -----------------~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~-~~~~~~~~~~~i~ad~vViAtG~~~~~~- 148 (408)
.+..+.++++..+ ++..++ ...+++. ++ ..+.||++|+||| +.|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~------~~~v~~~~~~-------~~~~~d~lviAtG--~~p~~ 147 (463)
T 4dna_A 84 LVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELAG------PNTVKLLASG-------KTVTAERIVIAVG--GHPSP 147 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEESS------SSEEEETTTT-------EEEEEEEEEECCC--EEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee------CCEEEEecCC-------eEEEeCEEEEecC--CCccc
Confidence 0011224444333 332221 1235552 22 6899999999999 6788
Q ss_pred CCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHH
Q 035488 149 EPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVL 228 (408)
Q Consensus 149 ~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~ 228 (408)
.|.+||.+. +.+..+.... ...+++++|||+|.+|+|+|..+...|.+|+++.+.+ .+++..+. ++...
T Consensus 148 ~p~i~G~~~----~~~~~~~~~~-~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~-~~l~~~~~-----~~~~~ 216 (463)
T 4dna_A 148 HDALPGHEL----CITSNEAFDL-PALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK-EILSRFDQ-----DMRRG 216 (463)
T ss_dssp CTTSTTGGG----CBCHHHHTTC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHHHH
T ss_pred CCCCCCccc----cccHHHHhhh-hcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH-----HHHHH
Confidence 888888652 2233222222 2358999999999999999999999999999999988 44444332 22221
Q ss_pred HHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC---
Q 035488 229 MMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG--- 303 (408)
Q Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~--- 303 (408)
+.+.+++.+|+++.+ +.+++.+
T Consensus 217 -----------------------------------------------------l~~~l~~~Gv~i~~~~~v~~i~~~~~~ 243 (463)
T 4dna_A 217 -----------------------------------------------------LHAAMEEKGIRILCEDIIQSVSADADG 243 (463)
T ss_dssp -----------------------------------------------------HHHHHHHTTCEEECSCCEEEEEECTTS
T ss_pred -----------------------------------------------------HHHHHHHCCCEEECCCEEEEEEEcCCC
Confidence 123345567888876 7777643
Q ss_pred --eEE-EecCcEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---cchhhH
Q 035488 304 --KVE-LVNGQVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GASLDA 375 (408)
Q Consensus 304 --~v~-~~~g~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~~a 375 (408)
.+. +.+|+ +++|.||+|+|++|+...+ ++..++ .+++|++.+| +.++|+.|+|||+|||++.+. .|..||
T Consensus 244 ~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g 321 (463)
T 4dna_A 244 RRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVD-AFSRTSTPGIYALGDVTDRVQLTPVAIHEA 321 (463)
T ss_dssp CEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCC-TTCBCSSTTEEECSGGGSSCCCHHHHHHHH
T ss_pred EEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeEC-cCCCCCCCCEEEEEecCCCCCChHHHHHHH
Confidence 366 67887 9999999999999998443 666677 5678999988 567799999999999998654 688999
Q ss_pred HHHHHHHHHH
Q 035488 376 MSVALDIAKS 385 (408)
Q Consensus 376 ~~~a~~i~~~ 385 (408)
+.+|.+|.+.
T Consensus 322 ~~aa~~i~g~ 331 (463)
T 4dna_A 322 MCFIETEYKN 331 (463)
T ss_dssp HHHHHHHHSS
T ss_pred HHHHHHHcCC
Confidence 9999999864
No 70
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.97 E-value=7.8e-32 Score=262.40 Aligned_cols=294 Identities=15% Similarity=0.106 Sum_probs=185.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCC-CCCCCeee-------ecCCccc--cCCCCCCCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQN-RTYDRLKL-------HLPKQFC--QLPNFPFPEDFPR 88 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~-~~~~~~~~-------~~~~~~~--~~~~~~~~~~~~~ 88 (408)
.+||+||||||+|++||..|++.|++|+|||++. +||+|.. ...+...+ .....+. .++......++..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGKA 86 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHHH
Confidence 3799999999999999999999999999999974 8886421 10110000 0000000 0000000000000
Q ss_pred CCC-------ccCcccc----ccceeEEEEEcCC-CCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCC
Q 035488 89 VPH-------QFDINPR----FNETVQSAKYDET-FGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQ 156 (408)
Q Consensus 89 ~~~-------~~~~~~~----~~~~V~~i~~~~~-~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~ 156 (408)
+.. ++...+. ....+.-+..... .+.++|++.++ ..+.||+||+||| +.|..|++++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~-------~~~~~d~lViATG--s~p~~p~~~~~~ 157 (492)
T 3ic9_A 87 VMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDH-------SQVIAKRIVIATG--SRPNYPEFLAAA 157 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTT-------EEEEEEEEEECCC--EECCCCHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCC-------cEEEeCEEEEccC--CCCcCCCCCCcc
Confidence 000 0000000 0000000100000 01234666443 6899999999999 778888765433
Q ss_pred CcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchH
Q 035488 157 HFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLW 236 (408)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~ 236 (408)
. ..+++..+... ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ ++++..+. ++...+.
T Consensus 158 ~--~~v~t~~~~~~-~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~-----~~~~~l~------ 222 (492)
T 3ic9_A 158 G--SRLLTNDNLFE-LNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG-SVANLQDE-----EMKRYAE------ 222 (492)
T ss_dssp G--GGEECHHHHTT-CSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT-CCTTCCCH-----HHHHHHH------
T ss_pred C--CcEEcHHHHhh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-cccccCCH-----HHHHHHH------
Confidence 1 23444433333 23468999999999999999999999999999999998 55554433 2222222
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC--e--EEEe--
Q 035488 237 LVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG--K--VELV-- 308 (408)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~--~--v~~~-- 308 (408)
+.+++. |+++.+ +.+++.. . +.+.
T Consensus 223 -----------------------------------------------~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~ 254 (492)
T 3ic9_A 223 -----------------------------------------------KTFNEE-FYFDAKARVISTIEKEDAVEVIYFDK 254 (492)
T ss_dssp -----------------------------------------------HHHHTT-SEEETTCEEEEEEECSSSEEEEEECT
T ss_pred -----------------------------------------------HHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeC
Confidence 223344 777766 6666542 2 4443
Q ss_pred cC--cEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---cchhhHHHHHHH
Q 035488 309 NG--QVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GASLDAMSVALD 381 (408)
Q Consensus 309 ~g--~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~~a~~~a~~ 381 (408)
+| +++++|.||+|+|++|++..+ ++..++ .+++|++.+|.+.++|+.|+|||+|||+..+. .|..||+.+|.+
T Consensus 255 ~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~ 334 (492)
T 3ic9_A 255 SGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTN 334 (492)
T ss_dssp TCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHH
T ss_pred CCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHHHHHHHHHHH
Confidence 67 689999999999999998433 666677 56789999885578899999999999987654 688999999999
Q ss_pred HHHH
Q 035488 382 IAKS 385 (408)
Q Consensus 382 i~~~ 385 (408)
|.+.
T Consensus 335 i~~~ 338 (492)
T 3ic9_A 335 AGAY 338 (492)
T ss_dssp HHHT
T ss_pred HcCC
Confidence 9863
No 71
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.97 E-value=3e-31 Score=258.10 Aligned_cols=285 Identities=17% Similarity=0.155 Sum_probs=188.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeeeec----C---Cc--cccCCCCCCCCCCC-
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKLHL----P---KQ--FCQLPNFPFPEDFP- 87 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~~~----~---~~--~~~~~~~~~~~~~~- 87 (408)
.+||+|||||++|+++|..|++.|++|+|||+ +.+||.|... ..+...+.. . .. .+.+.......++.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 104 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEK 104 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 47999999999999999999999999999999 6788865321 000000000 0 00 00000000000000
Q ss_pred -----------------CCCCccCccccccceeEEEEEcCCCCcEEEEEe-ecCCCCcceEEEEeCEEEEeeCCCCCCC-
Q 035488 88 -----------------RVPHQFDINPRFNETVQSAKYDETFGFWRIKTI-SSSDSSFCEVEYICRWLVVATGENAEKI- 148 (408)
Q Consensus 88 -----------------~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~-~~~~~~~~~~~i~ad~vViAtG~~~~~~- 148 (408)
.+..+.++++..+ ++..++. .. +++. ++ ..+.||++|+||| +.|.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~----~~--v~v~~~~-------~~~~~d~lviAtG--~~p~~ 168 (484)
T 3o0h_A 105 LVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVDE----HT--LELSVTG-------ERISAEKILIATG--AKIVS 168 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEET----TE--EEETTTC-------CEEEEEEEEECCC--EEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeC----CE--EEEecCC-------eEEEeCEEEEccC--CCccc
Confidence 0011334444443 3433431 22 5553 21 5899999999999 6777
Q ss_pred CCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHH
Q 035488 149 EPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVL 228 (408)
Q Consensus 149 ~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~ 228 (408)
.|.+||.+. +.+..+... ....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .+++..+. ++...
T Consensus 169 ~p~i~G~~~----~~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~-----~~~~~ 237 (484)
T 3o0h_A 169 NSAIKGSDL----CLTSNEIFD-LEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD-LILRNFDY-----DLRQL 237 (484)
T ss_dssp C--CBTGGG----SBCTTTGGG-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----HHHHH
T ss_pred CCCCCCccc----cccHHHHHh-HHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC-ccccccCH-----HHHHH
Confidence 788888652 223322222 23368999999999999999999999999999999988 45444332 22221
Q ss_pred HHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC---
Q 035488 229 MMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG--- 303 (408)
Q Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~--- 303 (408)
+ .+.+++.+|+++.+ +.+++.+
T Consensus 238 l-----------------------------------------------------~~~l~~~Gv~i~~~~~V~~i~~~~~~ 264 (484)
T 3o0h_A 238 L-----------------------------------------------------NDAMVAKGISIIYEATVSQVQSTENC 264 (484)
T ss_dssp H-----------------------------------------------------HHHHHHHTCEEESSCCEEEEEECSSS
T ss_pred H-----------------------------------------------------HHHHHHCCCEEEeCCEEEEEEeeCCE
Confidence 1 23334457777775 7777654
Q ss_pred -eEEEecCcEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---cchhhHHH
Q 035488 304 -KVELVNGQVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GASLDAMS 377 (408)
Q Consensus 304 -~v~~~~g~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~~a~~ 377 (408)
.+.+.+|+++++|.||+|+|++|+...+ ++..++ .+.+|++.+| +..+|+.|+|||+|||++.+. .|..||+.
T Consensus 265 v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~ 343 (484)
T 3o0h_A 265 YNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVD-EKMTTNVSHIWAVGDVTGHIQLTPVAIHDAMC 343 (484)
T ss_dssp EEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGTSCCCHHHHHHHHHH
T ss_pred EEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCCcCHHHHHHHHHH
Confidence 3777889899999999999999998433 555666 5678999988 567799999999999988554 68899999
Q ss_pred HHHHHHHH
Q 035488 378 VALDIAKS 385 (408)
Q Consensus 378 ~a~~i~~~ 385 (408)
+|.+|.+.
T Consensus 344 aa~~i~~~ 351 (484)
T 3o0h_A 344 FVKNAFEN 351 (484)
T ss_dssp HHHHHHC-
T ss_pred HHHHHcCC
Confidence 99999864
No 72
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.97 E-value=2.5e-31 Score=256.91 Aligned_cols=287 Identities=20% Similarity=0.249 Sum_probs=190.6
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeeee--------cCCccccCCCCCCCCCC----
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKLH--------LPKQFCQLPNFPFPEDF---- 86 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~~---- 86 (408)
+||+||||||+|+++|..|++.|++|+|||+++.+||+|... ..+...+. .....+..+......++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALM 81 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHH
Confidence 589999999999999999999999999999998899876421 00000000 00000000000000000
Q ss_pred --------------CCCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCC
Q 035488 87 --------------PRVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEF 152 (408)
Q Consensus 87 --------------~~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~ 152 (408)
..++.+.+++++.++.+ .+ +. +.+.|.+ ++ .++.||+||+||| +.|..|++
T Consensus 82 ~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i--~~--~~~~v~~-~g-------~~~~~d~lviAtG--~~p~~~~~ 146 (455)
T 2yqu_A 82 AHKDKVVQANTQGVEFLFKKNGIARHQGTAR-FL--SE--RKVLVEE-TG-------EELEARYILIATG--SAPLIPPW 146 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEEEESCEE-ES--SS--SEEEETT-TC-------CEEEEEEEEECCC--EEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Ee--cC--CeEEEee-CC-------EEEEecEEEECCC--CCCCCCCC
Confidence 01112345555554432 12 12 3433332 22 4799999999999 67888888
Q ss_pred CCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhh
Q 035488 153 EGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKY 232 (408)
Q Consensus 153 ~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 232 (408)
+|.+. ..+++..+..... ..+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+. ++...+.
T Consensus 147 ~g~~~--~~v~~~~~~~~~~-~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~-~~l~~~~~-----~~~~~l~-- 215 (455)
T 2yqu_A 147 AQVDY--ERVVTSTEALSFP-EVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD-RILPTMDL-----EVSRAAE-- 215 (455)
T ss_dssp BCCCS--SSEECHHHHTCCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH-----HHHHHHH--
T ss_pred CCCCc--CcEechHHhhccc-cCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC-ccccccCH-----HHHHHHH--
Confidence 77543 1345554444332 257899999999999999999999999999999988 55554332 2222221
Q ss_pred cchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC--Ce--EE
Q 035488 233 FPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP--GK--VE 306 (408)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--~~--v~ 306 (408)
+.+++.+|+++.+ +++++. +. +.
T Consensus 216 ---------------------------------------------------~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~ 244 (455)
T 2yqu_A 216 ---------------------------------------------------RVFKKQGLTIRTGVRVTAVVPEAKGARVE 244 (455)
T ss_dssp ---------------------------------------------------HHHHHHTCEEECSCCEEEEEEETTEEEEE
T ss_pred ---------------------------------------------------HHHHHCCCEEEECCEEEEEEEeCCEEEEE
Confidence 2233446777765 667653 23 44
Q ss_pred EecCcEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---cchhhHHHHHHH
Q 035488 307 LVNGQVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GASLDAMSVALD 381 (408)
Q Consensus 307 ~~~g~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~~a~~~a~~ 381 (408)
+.+++++++|.||+|+|++|+...+ ++..++ .+.+|++.+| +.++|+.|+||++||++..+. .|..||+.+|.+
T Consensus 245 ~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~ 323 (455)
T 2yqu_A 245 LEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVD-EHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEH 323 (455)
T ss_dssp ETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCC-TTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHH
T ss_pred ECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeEC-CCcccCCCCEEEEecCCCCccCHHHHHHhHHHHHHH
Confidence 4578899999999999999998433 566666 3557888888 457799999999999987654 578999999999
Q ss_pred HHH
Q 035488 382 IAK 384 (408)
Q Consensus 382 i~~ 384 (408)
|.+
T Consensus 324 i~~ 326 (455)
T 2yqu_A 324 MVR 326 (455)
T ss_dssp HHH
T ss_pred HcC
Confidence 986
No 73
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=5.3e-31 Score=254.52 Aligned_cols=282 Identities=18% Similarity=0.233 Sum_probs=188.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCC-CCCCCeee-----------ecCC-ccccCCCCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQN-RTYDRLKL-----------HLPK-QFCQLPNFPFPED 85 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~-~~~~~~~~-----------~~~~-~~~~~~~~~~~~~ 85 (408)
.+||+||||||+|++||..|++.|++|+|||+ +.+||+|.. ...+...+ .... ..+..+......+
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLD 83 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccC
Confidence 57999999999999999999999999999999 678887742 11110000 0000 0011110000001
Q ss_pred CC------------------CCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCC
Q 035488 86 FP------------------RVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEK 147 (408)
Q Consensus 86 ~~------------------~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~ 147 (408)
+. .+..+.+++++.++.+. ++ . + +|++.+ .++.||+||+||| +.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~~--~--~--~v~v~~--------~~~~~d~lviATG--s~p 146 (458)
T 1lvl_A 84 IGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-LD--G--K--QVEVDG--------QRIQCEHLLLATG--SSS 146 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-EE--T--T--EEEETT--------EEEECSEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-cc--C--C--EEEEee--------EEEEeCEEEEeCC--CCC
Confidence 10 11224566666655443 22 2 2 255543 4799999999999 566
Q ss_pred CCCC-CCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHH
Q 035488 148 IEPE-FEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLA 226 (408)
Q Consensus 148 ~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~ 226 (408)
..|+ +| .+ ..+++..+...... .+++++|||+|.+|+|+|..|.+.|.+|+++++.+ +++|..+. ++.
T Consensus 147 ~~~~~~~-~~---~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-----~~~ 215 (458)
T 1lvl_A 147 VELPMLP-LG---GPVISSTEALAPKA-LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE-RILPTYDS-----ELT 215 (458)
T ss_dssp CCBTTBC-CB---TTEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCH-----HHH
T ss_pred CCCCCCC-cc---CcEecHHHHhhhhc-cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCH-----HHH
Confidence 6554 44 22 13455555444332 57899999999999999999999999999999988 55553322 222
Q ss_pred HHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCe
Q 035488 227 VLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGK 304 (408)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~ 304 (408)
..+ .+.+++.+|+++.+ +.+++.++
T Consensus 216 ~~l-----------------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~~ 242 (458)
T 1lvl_A 216 APV-----------------------------------------------------AESLKKLGIALHLGHSVEGYENGC 242 (458)
T ss_dssp HHH-----------------------------------------------------HHHHHHHTCEEETTCEEEEEETTE
T ss_pred HHH-----------------------------------------------------HHHHHHCCCEEEECCEEEEEEeCC
Confidence 221 22234456777776 77777643
Q ss_pred EEEe--cC--cEEccCEEEEcCCCCCCCCCc-ccccccc-cCCCCCCCCCCCCCCCCCceEEEeeccccCc---cchhhH
Q 035488 305 VELV--NG--QVLEIDSVVLATGYRSNVPSW-LKENEFF-SENGIPKNPFPNGWKGKTGLYAVGFTKRGLS---GASLDA 375 (408)
Q Consensus 305 v~~~--~g--~~~~~D~vi~atG~~~~~~~l-~~~~~~~-~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~---~a~~~a 375 (408)
+.+. +| +++++|.||+|+|++|+...+ ++..++. +++ ++.+| +.++|+.|+|||+|||+..+. .|..||
T Consensus 243 v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g 320 (458)
T 1lvl_A 243 LLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAID-ERCQTSMHNVWAIGDVAGEPMLAHRAMAQG 320 (458)
T ss_dssp EEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCC-TTCBCSSTTEEECGGGGCSSCCHHHHHHHH
T ss_pred EEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeEC-CCCcCCCCCEEEeeccCCCcccHHHHHHHH
Confidence 5444 56 689999999999999998443 5666663 445 77777 467799999999999987654 678999
Q ss_pred HHHHHHHHH
Q 035488 376 MSVALDIAK 384 (408)
Q Consensus 376 ~~~a~~i~~ 384 (408)
+.+|.+|.+
T Consensus 321 ~~aa~~i~g 329 (458)
T 1lvl_A 321 EMVAEIIAG 329 (458)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 999999986
No 74
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.97 E-value=2.8e-31 Score=260.01 Aligned_cols=290 Identities=18% Similarity=0.151 Sum_probs=183.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC--------CCCCccCCC-CCCCeeeecC-------Ccc--ccCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN--------CIASLWQNR-TYDRLKLHLP-------KQF--CQLPNF 80 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~--------~~gg~w~~~-~~~~~~~~~~-------~~~--~~~~~~ 80 (408)
.+||+||||||+|++||..|++.|++|+|||+++ .+||+|... ..+...+... ... +.....
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~ 111 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVE 111 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccC
Confidence 5799999999999999999999999999999965 677765321 0110000000 000 000000
Q ss_pred -CCCCCCCCC------------------CCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEee
Q 035488 81 -PFPEDFPRV------------------PHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVAT 141 (408)
Q Consensus 81 -~~~~~~~~~------------------~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAt 141 (408)
....++... ....++++.. .++..++. .. +.+...++.. .++.||+|||||
T Consensus 112 ~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~-g~a~~~d~----~~--v~v~~~~g~~---~~i~~d~lViAT 181 (519)
T 3qfa_A 112 ETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYEN-AYGQFIGP----HR--IKATNNKGKE---KIYSAERFLIAT 181 (519)
T ss_dssp SSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEC-SEEEEEET----TE--EEEECTTCCC---CEEEEEEEEECC
T ss_pred CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-EEEEEeeC----CE--EEEEcCCCCE---EEEECCEEEEEC
Confidence 000011100 0022333332 22333321 33 3333332222 589999999999
Q ss_pred CCCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCc
Q 035488 142 GENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKS 221 (408)
Q Consensus 142 G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~ 221 (408)
| +.|..|++||... .+++..+.... ...+++++|||+|.+|+|+|..|.+.|.+|+++.|. .+++..+.
T Consensus 182 G--s~p~~p~i~G~~~---~~~t~~~~~~l-~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~--~~l~~~d~--- 250 (519)
T 3qfa_A 182 G--ERPRYLGIPGDKE---YCISSDDLFSL-PYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS--ILLRGFDQ--- 250 (519)
T ss_dssp C--EEECCCCCTTHHH---HCBCHHHHTTC-SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CSSTTSCH---
T ss_pred C--CCcCCCCCCCccC---ceEcHHHHhhh-hhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc--cccccCCH---
Confidence 9 7888888988653 22333333332 335678999999999999999999999999999984 34454432
Q ss_pred hHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccE
Q 035488 222 TFQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKK 299 (408)
Q Consensus 222 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~ 299 (408)
++...+ .+.+++.+|+++.+ +.+
T Consensus 251 --~~~~~~-----------------------------------------------------~~~l~~~GV~v~~~~~v~~ 275 (519)
T 3qfa_A 251 --DMANKI-----------------------------------------------------GEHMEEHGIKFIRQFVPIK 275 (519)
T ss_dssp --HHHHHH-----------------------------------------------------HHHHHHTTCEEEESEEEEE
T ss_pred --HHHHHH-----------------------------------------------------HHHHHHCCCEEEeCCeEEE
Confidence 222222 22334556777765 333
Q ss_pred E---eC---Ce--EEE--ecC---cEEccCEEEEcCCCCCCCCCc-cccccc-cc-CCCCCCCCCCCCCCCCCceEEEee
Q 035488 300 F---SP---GK--VEL--VNG---QVLEIDSVVLATGYRSNVPSW-LKENEF-FS-ENGIPKNPFPNGWKGKTGLYAVGF 363 (408)
Q Consensus 300 ~---~~---~~--v~~--~~g---~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~-~~g~~~~~~~~~~t~~~~iya~Gd 363 (408)
+ ++ +. +.+ .++ .++++|.|++|+|++|++..+ ++..++ .+ .+|++.+| +.++|+.|+|||+||
T Consensus 276 v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd-~~~~Ts~~~IyA~GD 354 (519)
T 3qfa_A 276 VEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVT-DEEQTNVPYIYAIGD 354 (519)
T ss_dssp EEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCC-TTSBCSSTTEEECGG
T ss_pred EEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeC-CCCccCCCCEEEEEe
Confidence 3 32 22 222 345 256899999999999998444 666677 44 47899998 567899999999999
Q ss_pred cc-ccCc---cchhhHHHHHHHHHHH
Q 035488 364 TK-RGLS---GASLDAMSVALDIAKS 385 (408)
Q Consensus 364 ~~-~~~~---~a~~~a~~~a~~i~~~ 385 (408)
|+ +.+. .|..||+.+|.+|.+.
T Consensus 355 ~~~g~~~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 355 ILEDKVELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp GBSSSCCCHHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 98 4333 6889999999999853
No 75
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.97 E-value=2.6e-31 Score=258.87 Aligned_cols=290 Identities=15% Similarity=0.157 Sum_probs=184.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEec--------CCCCCCccCCC-CCCCeeeecC-------Ccc--ccCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILER--------ANCIASLWQNR-TYDRLKLHLP-------KQF--CQLPNF 80 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~--------~~~~gg~w~~~-~~~~~~~~~~-------~~~--~~~~~~ 80 (408)
.+||+||||||+|++||..|++.|.+|+|||+ ...+||+|... ..+...+... ... +.....
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~ 85 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVA 85 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcccC
Confidence 47999999999999999999999999999998 45678876321 1110000000 000 000000
Q ss_pred -CCCCCCCCCCC------------------ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEee
Q 035488 81 -PFPEDFPRVPH------------------QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVAT 141 (408)
Q Consensus 81 -~~~~~~~~~~~------------------~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAt 141 (408)
....++..+.. +.++++.. .++..++ . .. +++...++.. .++.||+|||||
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~-g~~~~~~--~--~~--v~v~~~~g~~---~~~~~d~lViAT 155 (488)
T 3dgz_A 86 QPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFN-IKASFVD--E--HT--VRGVDKGGKA---TLLSAEHIVIAT 155 (488)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEC-CEEEESS--S--SE--EEEECTTSCE---EEEEEEEEEECC
T ss_pred CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-EEEEEcc--C--Ce--EEEEeCCCce---EEEECCEEEEcC
Confidence 00001110000 12333322 2222221 1 33 3333322222 589999999999
Q ss_pred CCCCCCCCCC-CCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCC
Q 035488 142 GENAEKIEPE-FEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGK 220 (408)
Q Consensus 142 G~~~~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~ 220 (408)
| +.|..|+ +||.... .++..+.... ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.. +++..+.
T Consensus 156 G--s~p~~p~~i~G~~~~---~~~~~~~~~~-~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~--~l~~~d~-- 225 (488)
T 3dgz_A 156 G--GRPRYPTQVKGALEY---GITSDDIFWL-KESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI--PLRGFDQ-- 225 (488)
T ss_dssp C--EEECCCSSCBTHHHH---CBCHHHHTTC-SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC--SSTTSCH--
T ss_pred C--CCCCCCCCCCCcccc---cCcHHHHHhh-hhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc--ccccCCH--
Confidence 9 7888888 8887432 2333333332 3357789999999999999999999999999998864 3343322
Q ss_pred chHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--cc
Q 035488 221 STFQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IK 298 (408)
Q Consensus 221 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~ 298 (408)
++...+ .+.+++.+|+++.+ +.
T Consensus 226 ---~~~~~l-----------------------------------------------------~~~l~~~gv~~~~~~~v~ 249 (488)
T 3dgz_A 226 ---QMSSLV-----------------------------------------------------TEHMESHGTQFLKGCVPS 249 (488)
T ss_dssp ---HHHHHH-----------------------------------------------------HHHHHHTTCEEEETEEEE
T ss_pred ---HHHHHH-----------------------------------------------------HHHHHHCCCEEEeCCEEE
Confidence 222221 23344567777766 66
Q ss_pred EEeC---Ce--EEEec---Cc--EEccCEEEEcCCCCCCCCCc-cccccc-cc-CCCCCCCCCCCCCCCCCceEEEeecc
Q 035488 299 KFSP---GK--VELVN---GQ--VLEIDSVVLATGYRSNVPSW-LKENEF-FS-ENGIPKNPFPNGWKGKTGLYAVGFTK 365 (408)
Q Consensus 299 ~~~~---~~--v~~~~---g~--~~~~D~vi~atG~~~~~~~l-~~~~~~-~~-~~g~~~~~~~~~~t~~~~iya~Gd~~ 365 (408)
+++. +. +.+.+ |+ ++++|.||+|+|++|++..+ ++..++ .+ .+|++.+| +.++|+.|+|||+|||+
T Consensus 250 ~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~ 328 (488)
T 3dgz_A 250 HIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVD-AQEATSVPHIYAIGDVA 328 (488)
T ss_dssp EEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCC-TTSBCSSTTEEECGGGB
T ss_pred EEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeEC-CCCccCCCCEEEeEEec
Confidence 6643 22 45544 54 47899999999999998433 566666 45 68999988 57789999999999997
Q ss_pred c-cCc---cchhhHHHHHHHHHHH
Q 035488 366 R-GLS---GASLDAMSVALDIAKS 385 (408)
Q Consensus 366 ~-~~~---~a~~~a~~~a~~i~~~ 385 (408)
. .+. .|..||+.+|.+|.+.
T Consensus 329 ~~~~~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 329 EGRPELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCcchhHHHHHHHHHHHHHcCC
Confidence 3 332 6889999999999864
No 76
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.97 E-value=2.4e-30 Score=252.22 Aligned_cols=293 Identities=18% Similarity=0.163 Sum_probs=182.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC--------CCCCcc-CCCCCCCeee----------ecCCccccCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN--------CIASLW-QNRTYDRLKL----------HLPKQFCQLPN 79 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~--------~~gg~w-~~~~~~~~~~----------~~~~~~~~~~~ 79 (408)
.|||+||||||+|++||.+++++|.+|+|||+.. .+||+- +....+.-.+ ......+.+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 4899999999999999999999999999999743 356520 0000000000 00000000000
Q ss_pred CCCCCCCCCCC------------------CccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEee
Q 035488 80 FPFPEDFPRVP------------------HQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVAT 141 (408)
Q Consensus 80 ~~~~~~~~~~~------------------~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAt 141 (408)
.....++.... ++.++++..+. .. +. .. ....|......+.. .++++|++||||
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~-a~-f~-~~--~~v~V~~~~~~~~~---~~i~a~~iiIAT 193 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGL-AK-LK-DK--NTVSYYLKGDLSKE---ETVTGKYILIAT 193 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEE-EE-EE-ET--TEEEEEEC--CCCE---EEEEEEEEEECC
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeee-EE-Ec-CC--CcceEeecccCCce---EEEeeeeEEecc
Confidence 00000111100 02233332211 11 11 11 33333333322222 689999999999
Q ss_pred CCCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCc
Q 035488 142 GENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKS 221 (408)
Q Consensus 142 G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~ 221 (408)
| ++|.+|+.++... ..++++.+..+. ...+++++|||+|.+|+|+|..++.+|.+||++.|. .++|..+.
T Consensus 194 G--s~P~~P~~~~~~~--~~~~ts~~~l~l-~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~--~~L~~~D~--- 263 (542)
T 4b1b_A 194 G--CRPHIPDDVEGAK--ELSITSDDIFSL-KKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS--IVLRGFDQ--- 263 (542)
T ss_dssp C--EEECCCSSSBTHH--HHCBCHHHHTTC-SSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS--CSSTTSCH---
T ss_pred C--CCCCCCCcccCCC--ccccCchhhhcc-ccCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc--ccccccch---
Confidence 9 8888885443321 123444444433 346899999999999999999999999999999874 45676655
Q ss_pred hHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccE
Q 035488 222 TFQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKK 299 (408)
Q Consensus 222 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~ 299 (408)
++...+... +++.+|+++.+ +.+
T Consensus 264 --ei~~~l~~~-----------------------------------------------------l~~~gi~~~~~~~v~~ 288 (542)
T 4b1b_A 264 --QCAVKVKLY-----------------------------------------------------MEEQGVMFKNGILPKK 288 (542)
T ss_dssp --HHHHHHHHH-----------------------------------------------------HHHTTCEEEETCCEEE
T ss_pred --hHHHHHHHH-----------------------------------------------------HHhhcceeecceEEEE
Confidence 444443333 34456777666 455
Q ss_pred EeC--Ce--EEEecCcEEccCEEEEcCCCCCCCCCc-cccccc-ccCCCCC-CCCCCCCCCCCCceEEEeeccccC-c--
Q 035488 300 FSP--GK--VELVNGQVLEIDSVVLATGYRSNVPSW-LKENEF-FSENGIP-KNPFPNGWKGKTGLYAVGFTKRGL-S-- 369 (408)
Q Consensus 300 ~~~--~~--v~~~~g~~~~~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~-~~~~~~~~t~~~~iya~Gd~~~~~-~-- 369 (408)
++. +. +.+.++..+.+|.|++|+|++||+..| ++..++ .+.++.+ .+| +.++|+.|+|||+|||+++. .
T Consensus 289 ~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd-~~~~Ts~p~IyAiGDv~~~~p~La 367 (542)
T 4b1b_A 289 LTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIAD-HLSCTNIPSIFAVGDVAENVPELA 367 (542)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCC-TTSBCSSTTEEECTTSBTTCCCCH
T ss_pred EEecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEecc-ccccccCCCeEEeccccCCchhHH
Confidence 543 22 566788889999999999999999554 444555 3455555 555 68899999999999998653 3
Q ss_pred -cchhhHHHHHHHHHHH
Q 035488 370 -GASLDAMSVALDIAKS 385 (408)
Q Consensus 370 -~a~~~a~~~a~~i~~~ 385 (408)
.|..+|+.++.+|.+.
T Consensus 368 ~~A~~eg~~aa~~i~g~ 384 (542)
T 4b1b_A 368 PVAIKAGEILARRLFKD 384 (542)
T ss_dssp HHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 6778999999998864
No 77
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.97 E-value=5.6e-32 Score=260.02 Aligned_cols=305 Identities=12% Similarity=0.120 Sum_probs=199.3
Q ss_pred cCCcEEECCChHHHHHHHHHHH---cCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN---QGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDI 95 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~---~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (408)
+++|+|||||++|+++|..|++ .|++|+|||+++.+. |.............. ......+.+++.+.++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~-------~~~~~~~~~~g~~~~--~~~~~~l~~~~~~~gv 74 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ-------FVPSNPWVGVGWKER--DDIAFPIRHYVERKGI 74 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE-------CGGGHHHHHHTSSCH--HHHEEECHHHHHTTTC
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc-------ccCCccccccCccCH--HHHHHHHHHHHHHCCC
Confidence 4689999999999999999999 799999999988542 111110000000000 0000011222334577
Q ss_pred cccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCC--
Q 035488 96 NPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGAS-- 173 (408)
Q Consensus 96 ~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~-- 173 (408)
+++ ..+|+.++... +. |++.++ .++.||+||+||| +.+..|.+||.....+...+.+.+.+...
T Consensus 75 ~~~-~~~v~~id~~~--~~--V~~~~g-------~~i~~d~lviAtG--~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~ 140 (437)
T 3sx6_A 75 HFI-AQSAEQIDAEA--QN--ITLADG-------NTVHYDYLMIATG--PKLAFENVPGSDPHEGPVQSICTVDHAERAF 140 (437)
T ss_dssp EEE-CSCEEEEETTT--TE--EEETTS-------CEEECSEEEECCC--CEECGGGSTTCSTTTSSEECCSSHHHHHHHH
T ss_pred EEE-EeEEEEEEcCC--CE--EEECCC-------CEEECCEEEECCC--CCcCcccCCCCCcccCcceecccccHHHHHH
Confidence 775 47899998665 43 777654 5799999999999 67788888888753233333333222111
Q ss_pred ------CCCCeEEEEccCCc----H--HHHH----HHHhccCCc-----cEEEEecCceeecccccCCchHHHHHHHHhh
Q 035488 174 ------YRGKRVLVVGCGNS----G--MEVS----LDLCNHNAK-----PSMVVRSSVHVLPREVLGKSTFQLAVLMMKY 232 (408)
Q Consensus 174 ------~~~~~v~VvG~G~~----a--~e~a----~~l~~~g~~-----V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 232 (408)
..+++++|||+|.+ | +|+| ..+.+.|.+ |+++++.+ .+.+....+.+ +.
T Consensus 141 ~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~-~~~~~~l~~~~--~~------- 210 (437)
T 3sx6_A 141 AEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEP-YIGHLGIQGVG--DS------- 210 (437)
T ss_dssp HHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSS-STTCTTTTCCT--TH-------
T ss_pred HHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCc-cccccccCcch--HH-------
Confidence 11456789998554 4 8888 444556654 99999887 33221111000 01
Q ss_pred cchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCeEEEec-
Q 035488 233 FPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGKVELVN- 309 (408)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~~- 309 (408)
.....+.+++.+|+++.+ +++++++++.+.+
T Consensus 211 ----------------------------------------------~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~ 244 (437)
T 3sx6_A 211 ----------------------------------------------KGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQV 244 (437)
T ss_dssp ----------------------------------------------HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEE
T ss_pred ----------------------------------------------HHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEec
Confidence 111234456678999887 8999998877765
Q ss_pred --------CcEEccCEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCC-CCCceEEEeeccccC------------
Q 035488 310 --------GQVLEIDSVVLATGYRSNVPSWLKENEFFSENGIPKNPFPNGWK-GKTGLYAVGFTKRGL------------ 368 (408)
Q Consensus 310 --------g~~~~~D~vi~atG~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t-~~~~iya~Gd~~~~~------------ 368 (408)
++++++|.+++++|+.++. .+.+..++.+++|++.+|. .+++ +.|||||+|||+..+
T Consensus 245 ~~~g~~~~~~~i~~D~vv~~~g~~~~~-~~~~~~gl~~~~G~i~Vd~-~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~p 322 (437)
T 3sx6_A 245 DEKGETIKEMVLPVKFGMMIPAFKGVP-AVAGVEGLCNPGGFVLVDE-HQRSKKYANIFAAGIAIAIPPVETTPVPTGAP 322 (437)
T ss_dssp CTTSCEEEEEEEECSEEEEECCEECCH-HHHTSTTTBCTTSCBCBCT-TSBBSSCTTEEECGGGBCCCCSCCCSSCCCCC
T ss_pred ccCCccccceEEEEeEEEEcCCCcCch-hhhccccccCCCCcEEeCh-hccCCCCCCEEEEEEEeccCCcCCCcCCCCCC
Confidence 6789999999999999874 4443456778899999995 5565 999999999997632
Q ss_pred c---cchhhHHHHHHHHHHHhhHHhHhhhhhhhhhhccccc
Q 035488 369 S---GASLDAMSVALDIAKSWKEETKQKKKSIASRQRRCIS 406 (408)
Q Consensus 369 ~---~a~~~a~~~a~~i~~~~~~~~~~~~~~~~~~~~~~~~ 406 (408)
. .|..||+.+|.+|.+.+.+.+..... ......|++
T Consensus 323 k~~~~A~~qg~~aA~ni~~~l~g~~~~~~~--~~~~~~~~~ 361 (437)
T 3sx6_A 323 KTGYMIESMVSAAVHNIKADLEGRKGEQTM--GTWNAVAFA 361 (437)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTTSCCCCCC--CSCCEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCCCCCCcc--cCcceEEEE
Confidence 1 68899999999999999886544311 223456664
No 78
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.96 E-value=1.7e-30 Score=252.89 Aligned_cols=290 Identities=18% Similarity=0.142 Sum_probs=183.5
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC---------CCCCccCCC-CCCCeeeecC-------Cc--cccCC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN---------CIASLWQNR-TYDRLKLHLP-------KQ--FCQLP 78 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~---------~~gg~w~~~-~~~~~~~~~~-------~~--~~~~~ 78 (408)
..+||+||||||+|++||..|++.|++|+|||+.. .+||+|... ..+...+... .. .+...
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 35799999999999999999999999999999521 377766321 0110000000 00 00010
Q ss_pred CCC-CCCCCCCC------------------CCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEE
Q 035488 79 NFP-FPEDFPRV------------------PHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVV 139 (408)
Q Consensus 79 ~~~-~~~~~~~~------------------~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vVi 139 (408)
... ...++..+ +...++++.. ..+.-++ . ..+.|.+.++ + .++.||+|||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-g~a~~~~--~--~~v~v~~~~g---~---~~~~~d~lvi 156 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYIN-GLGSFVD--S--HTLLAKLKSG---E---RTITAQTFVI 156 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEC-SEEEEEE--T--TEEEEECTTC---C---EEEEEEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-eEEEEcc--C--CEEEEEeCCC---e---EEEEcCEEEE
Confidence 000 00011000 0012333322 1222221 1 3333433322 1 4799999999
Q ss_pred eeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccC
Q 035488 140 ATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLG 219 (408)
Q Consensus 140 AtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~ 219 (408)
||| +.|..|++||.... .++..+.... ...+++++|||+|.+|+|+|..+.+.|.+|+++.+.. +++..+.
T Consensus 157 ATG--s~p~~p~i~G~~~~---~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~--~l~~~d~- 227 (483)
T 3dgh_A 157 AVG--GRPRYPDIPGAVEY---GITSDDLFSL-DREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI--VLRGFDQ- 227 (483)
T ss_dssp CCC--EEECCCSSTTHHHH---CBCHHHHTTC-SSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC--SSTTSCH-
T ss_pred eCC--CCcCCCCCCCcccc---cCcHHHHhhh-hhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC--CCcccCH-
Confidence 999 78888889887532 2333333332 3367899999999999999999999999999998843 4443332
Q ss_pred CchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--c
Q 035488 220 KSTFQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--I 297 (408)
Q Consensus 220 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i 297 (408)
++...+ .+.+++.+|+++.+ +
T Consensus 228 ----~~~~~l-----------------------------------------------------~~~l~~~Gv~i~~~~~v 250 (483)
T 3dgh_A 228 ----QMAELV-----------------------------------------------------AASMEERGIPFLRKTVP 250 (483)
T ss_dssp ----HHHHHH-----------------------------------------------------HHHHHHTTCCEEETEEE
T ss_pred ----HHHHHH-----------------------------------------------------HHHHHhCCCEEEeCCEE
Confidence 222221 23334556777766 6
Q ss_pred cEEeC--C---eEEEecCc-----EEccCEEEEcCCCCCCCCCc-ccccccccCCCCCCCCCCCCCCCCCceEEEeeccc
Q 035488 298 KKFSP--G---KVELVNGQ-----VLEIDSVVLATGYRSNVPSW-LKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKR 366 (408)
Q Consensus 298 ~~~~~--~---~v~~~~g~-----~~~~D~vi~atG~~~~~~~l-~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~ 366 (408)
.+++. + .+.+.++. ++++|.||+|+|++|++..+ ++..++..++|++.+| +.++|+.|+|||+|||+.
T Consensus 251 ~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i~vd-~~~~t~~~~IyA~GD~~~ 329 (483)
T 3dgh_A 251 LSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPVD-SQEATNVANIYAVGDIIY 329 (483)
T ss_dssp EEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBBCCC-TTCBCSSTTEEECSTTBT
T ss_pred EEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccCCEEEEC-cCCccCCCCEEEEEcccC
Confidence 66653 2 25666654 78999999999999998333 3666774334999988 567899999999999973
Q ss_pred -cCc---cchhhHHHHHHHHHHH
Q 035488 367 -GLS---GASLDAMSVALDIAKS 385 (408)
Q Consensus 367 -~~~---~a~~~a~~~a~~i~~~ 385 (408)
.+. .|..||+.+|.+|.+.
T Consensus 330 ~~~~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 330 GKPELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCccHHHHHHHHHHHHHHHcCC
Confidence 333 6889999999999864
No 79
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.96 E-value=3.9e-29 Score=242.36 Aligned_cols=310 Identities=22% Similarity=0.331 Sum_probs=183.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcC-----CCEEEEecCCCCCCccCCCCC-CCeeeecC--CccccC--CCCCC------
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQG-----VPFIILERANCIASLWQNRTY-DRLKLHLP--KQFCQL--PNFPF------ 82 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g-----~~v~lie~~~~~gg~w~~~~~-~~~~~~~~--~~~~~~--~~~~~------ 82 (408)
++||+|||||++|+++|..|++.| .+|+|||+.+.+| |....+ +...+..+ ..+... +...+
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 469999999999999999999999 9999999999887 654332 11111100 000000 00000
Q ss_pred ----------------C--CCCCC----CCCccCccccccceeEEEEEcCC-CCcE--EEEEeecCCCCcceEEEEeCEE
Q 035488 83 ----------------P--EDFPR----VPHQFDINPRFNETVQSAKYDET-FGFW--RIKTISSSDSSFCEVEYICRWL 137 (408)
Q Consensus 83 ----------------~--~~~~~----~~~~~~~~~~~~~~V~~i~~~~~-~~~~--~V~~~~~~~~~~~~~~i~ad~v 137 (408)
+ ..+.. +..++++.++++++|++++...+ .+.| +|++.++.+.. .++.||+|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~---~~~~~d~l 184 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEE---LVRTTRAL 184 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCE---EEEEESEE
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCce---EEEEeCEE
Confidence 0 00000 11256788899999999987621 1444 66666654332 48999999
Q ss_pred EEeeCCCCCCCCCCCCCCCCcce--eeeeccCCCCC-CCC-----CCCeEEEEccCCcHHHHHHHHhcc--CCccEEEEe
Q 035488 138 VVATGENAEKIEPEFEGLQHFEG--NVMHAGDYKSG-ASY-----RGKRVLVVGCGNSGMEVSLDLCNH--NAKPSMVVR 207 (408)
Q Consensus 138 ViAtG~~~~~~~p~~~g~~~~~~--~~~~~~~~~~~-~~~-----~~~~v~VvG~G~~a~e~a~~l~~~--g~~V~~~~r 207 (408)
|+||| +.|.+|.. ...+.+ .++|..++.+. ... .+++|+|||+|.+|+|+|..|.+. +.+|++++|
T Consensus 185 VlAtG--~~p~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r 260 (463)
T 3s5w_A 185 VVSPG--GTPRIPQV--FRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILR 260 (463)
T ss_dssp EECCC--CEECCCGG--GGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECS
T ss_pred EECCC--CCCCCcch--hhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEe
Confidence 99999 56666652 222223 56777766442 222 588999999999999999999998 889999999
Q ss_pred cCceeecccccCCchHHHHHH--------HHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccC
Q 035488 208 SSVHVLPREVLGKSTFQLAVL--------MMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLD 279 (408)
Q Consensus 208 ~~~~~~p~~~~~~~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (408)
++ .++|.... .+... ....++...+.++....... .+... .+...
T Consensus 261 ~~-~~~p~~~~-----~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~---------------~~~~~ 313 (463)
T 3s5w_A 261 AS-ALKPADDS-----PFVNEVFAPKFTDLIYSREHAERERLLREYHNT------NYSVV---------------DTDLI 313 (463)
T ss_dssp SS-SCCBCCCC-----HHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGG------TSSCB---------------CHHHH
T ss_pred CC-CCcCccCC-----ccchhccChhHHHHHhcCCHHHHHHHHHHhhcc------CCCcC---------------CHHHH
Confidence 98 56675543 21111 11112222222222211000 00000 00000
Q ss_pred h-----hhhhhhc-cCCeEEecC--ccEEeC--Ce--EEEe---cCcE--EccCEEEEcCCCCCCC-CCcccccccccCC
Q 035488 280 I-----GALQKIR-SGDIKVVPG--IKKFSP--GK--VELV---NGQV--LEIDSVVLATGYRSNV-PSWLKENEFFSEN 341 (408)
Q Consensus 280 ~-----~~~~~~~-~~~i~~~~~--i~~~~~--~~--v~~~---~g~~--~~~D~vi~atG~~~~~-~~l~~~~~~~~~~ 341 (408)
. .+.+.+. ..+|+++.+ |++++. +. +.+. +|+. +++|.||+|||++|+. ..++.......
T Consensus 314 ~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~-- 391 (463)
T 3s5w_A 314 ERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL-- 391 (463)
T ss_dssp HHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB--
T ss_pred HHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh--
Confidence 0 0111111 257888887 677654 33 5555 6654 8999999999999992 35666553322
Q ss_pred CCCCCCCCCCCCC----CCceEEEeeccc
Q 035488 342 GIPKNPFPNGWKG----KTGLYAVGFTKR 366 (408)
Q Consensus 342 g~~~~~~~~~~t~----~~~iya~Gd~~~ 366 (408)
|.+.++...+... .|+||++|||..
T Consensus 392 g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~ 420 (463)
T 3s5w_A 392 GDHEIGRDYRLQTDERCKVAIYAQGFSQA 420 (463)
T ss_dssp C--CCCTTSBCCBCTTBCSEEEESSCCHH
T ss_pred CCcccCcccccccCCCCCCeEEEcCCCcc
Confidence 6676664333222 567999999864
No 80
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.96 E-value=5.9e-29 Score=242.22 Aligned_cols=334 Identities=17% Similarity=0.187 Sum_probs=188.9
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcC--------------CCEEEEecCCCCCCccCCCC-CCCeeeecC--CccccCCCC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQG--------------VPFIILERANCIASLWQNRT-YDRLKLHLP--KQFCQLPNF 80 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g--------------~~v~lie~~~~~gg~w~~~~-~~~~~~~~~--~~~~~~~~~ 80 (408)
.++||+|||+||+||++|+.|.+.| ...+++|+.+.++ |+..+ +++..++.+ +++....+.
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P 115 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDP 115 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCT
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCC
Confidence 3689999999999999999998753 3678889888776 76543 555554433 222222111
Q ss_pred CCCCC--------------------------CCCCC----CccCccccccceeEEEEEcCCC------CcEEEEEeecCC
Q 035488 81 PFPED--------------------------FPRVP----HQFDINPRFNETVQSAKYDETF------GFWRIKTISSSD 124 (408)
Q Consensus 81 ~~~~~--------------------------~~~~~----~~~~~~~~~~~~V~~i~~~~~~------~~~~V~~~~~~~ 124 (408)
..+.. +.+|+ ++++..++++++|+++...... +.|+|++.++.+
T Consensus 116 ~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~ 195 (501)
T 4b63_A 116 RSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVET 195 (501)
T ss_dssp TCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTT
T ss_pred CCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCC
Confidence 11101 11111 1667778999999999876532 259999998765
Q ss_pred CCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCC------CCCCCCCeEEEEccCCcHHHHHHHHhcc
Q 035488 125 SSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKS------GASYRGKRVLVVGCGNSGMEVSLDLCNH 198 (408)
Q Consensus 125 ~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~a~e~a~~l~~~ 198 (408)
++ ..++.|+.||+||| ..|.+|.. ..+.+.++|+.++.. ...+.+|+|+|||+|+||+|++..|++.
T Consensus 196 g~--~~~~~ar~vVlatG--~~P~iP~~---~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~ 268 (501)
T 4b63_A 196 GE--ISARRTRKVVIAIG--GTAKMPSG---LPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKR 268 (501)
T ss_dssp CC--EEEEEEEEEEECCC--CEECCCTT---SCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHH
T ss_pred ce--EEEEEeCEEEECcC--CCCCCCCC---CCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhc
Confidence 54 36899999999999 56666654 344578999988864 3457899999999999999999999875
Q ss_pred --CCccEEEEecCceeecccccCCchHHHHHH---HHhhcchHHHHHHHHHHHHHHh------------hhhhhcCCCCC
Q 035488 199 --NAKPSMVVRSSVHVLPREVLGKSTFQLAVL---MMKYFPLWLVDKILLILARLIL------------GNVEKYGLKRP 261 (408)
Q Consensus 199 --g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 261 (408)
+.+|+++.|++ ++.|..+.+.....+... ....++...+.++......... ...-...+..+
T Consensus 269 ~~~~~v~~~~R~~-~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~ 347 (501)
T 4b63_A 269 YPNSRTTLIMRDS-AMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNP 347 (501)
T ss_dssp STTCEEEEECSSS-SCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCS
T ss_pred CCCceEEEEeCCC-ccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCC
Confidence 67999999998 555655442211110000 0111222222222211110000 00000000000
Q ss_pred CCCCcccccCCCCCcccChhhhhhhccCCeEEecCccEEeCCeEEEecCcEEccCEEEEcCCCCCCCCCccccc-c-c-c
Q 035488 262 PTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPGIKKFSPGKVELVNGQVLEIDSVVLATGYRSNVPSWLKEN-E-F-F 338 (408)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~l~~~~-~-~-~ 338 (408)
...... ....+..... ..........+++...+.+++++++.+.+|+++++|.||+||||+++.+.++... . + .
T Consensus 348 ~~~~~~-~~l~~~~~v~--~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~ 424 (501)
T 4b63_A 348 DETQWQ-HRILPERKIT--RVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRP 424 (501)
T ss_dssp CGGGCS-SEEECSEEEE--EEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSS
T ss_pred cccccc-eeecCCccee--eeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCc
Confidence 000000 0000000000 0001112234555444566677788899999999999999999999975443332 2 2 4
Q ss_pred cCCCCCCCCCC--CCC-----CCCCceEEEeec
Q 035488 339 SENGIPKNPFP--NGW-----KGKTGLYAVGFT 364 (408)
Q Consensus 339 ~~~g~~~~~~~--~~~-----t~~~~iya~Gd~ 364 (408)
+.+|.+.++.+ ..+ ...++||+.|.+
T Consensus 425 d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 425 TGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp TTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCC
T ss_pred CcCCCeeeCCCcEEeecCCccCCCceEEecCCC
Confidence 55666654422 222 235789999864
No 81
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.96 E-value=1.4e-30 Score=253.46 Aligned_cols=291 Identities=15% Similarity=0.185 Sum_probs=187.3
Q ss_pred ccCCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCccCCCCCCCeeeec--CC-----cccc---------C-C
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCIASLWQNRTYDRLKLHL--PK-----QFCQ---------L-P 78 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~gg~w~~~~~~~~~~~~--~~-----~~~~---------~-~ 78 (408)
..++|+|||||+||++||..|++. |.+|+|||+++.++. ............ +. .+.. + +
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y--~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPY--MRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 87 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCB--CSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCC--CCCCCCHHhhcCCccchhhcccccccccccccccccc
Confidence 356899999999999999999988 789999999987651 100000000000 00 0000 0 0
Q ss_pred --CCCCCCCCCCCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCC
Q 035488 79 --NFPFPEDFPRVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQ 156 (408)
Q Consensus 79 --~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~ 156 (408)
.+.....+. ...+.+++++.+++|++++... + +|++.++ .++.||+|||||| +.|..|++++..
T Consensus 88 ~~~~~~~~~l~-~~~~~gv~~~~g~~v~~id~~~--~--~V~~~~g-------~~i~yd~lviATG--s~p~~~~~~~~~ 153 (493)
T 1m6i_A 88 PSFYVSAQDLP-HIENGGVAVLTGKKVVQLDVRD--N--MVKLNDG-------SQITYEKCLIATG--GTPRSLSAIDRA 153 (493)
T ss_dssp GGGSBCTTTTT-TSTTCEEEEEETCCEEEEEGGG--T--EEEETTS-------CEEEEEEEEECCC--EEECCCHHHHTS
T ss_pred hHhhcchhhhh-hhhcCCeEEEcCCEEEEEECCC--C--EEEECCC-------CEEECCEEEECCC--CCCCCCCCcccc
Confidence 000000111 1124578888899999998765 3 3777654 5799999999999 667666554421
Q ss_pred --CcceeeeeccCCCC-----CCCCCCCeEEEEccCCcHHHHHHHHhc----cCCccEEEEecCceeecccccCCchHHH
Q 035488 157 --HFEGNVMHAGDYKS-----GASYRGKRVLVVGCGNSGMEVSLDLCN----HNAKPSMVVRSSVHVLPREVLGKSTFQL 225 (408)
Q Consensus 157 --~~~~~~~~~~~~~~-----~~~~~~~~v~VvG~G~~a~e~a~~l~~----~g~~V~~~~r~~~~~~p~~~~~~~~~~~ 225 (408)
.....+.......+ .....+++++|||+|.+|+|+|..|++ .|.+|+++.+.+ ..+++... .++
T Consensus 154 ~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~-~~~~~~l~----~~~ 228 (493)
T 1m6i_A 154 GAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK-GNMGKILP----EYL 228 (493)
T ss_dssp CHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS-STTTTTSC----HHH
T ss_pred cccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc-ccccccCC----HHH
Confidence 11111222111111 011247999999999999999999987 467899988765 22221110 011
Q ss_pred HHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC-
Q 035488 226 AVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP- 302 (408)
Q Consensus 226 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~- 302 (408)
.. ...+.+++.+|+++.+ |++++.
T Consensus 229 ~~-----------------------------------------------------~~~~~l~~~GV~v~~~~~V~~i~~~ 255 (493)
T 1m6i_A 229 SN-----------------------------------------------------WTMEKVRREGVKVMPNAIVQSVGVS 255 (493)
T ss_dssp HH-----------------------------------------------------HHHHHHHTTTCEEECSCCEEEEEEE
T ss_pred HH-----------------------------------------------------HHHHHHHhcCCEEEeCCEEEEEEec
Confidence 11 1123445668888877 777753
Q ss_pred -C--eEEEecCcEEccCEEEEcCCCCCCCCCccccccc-ccC-CCCCCCCCCCCCCCCCceEEEeeccccC---------
Q 035488 303 -G--KVELVNGQVLEIDSVVLATGYRSNVPSWLKENEF-FSE-NGIPKNPFPNGWKGKTGLYAVGFTKRGL--------- 368 (408)
Q Consensus 303 -~--~v~~~~g~~~~~D~vi~atG~~~~~~~l~~~~~~-~~~-~g~~~~~~~~~~t~~~~iya~Gd~~~~~--------- 368 (408)
+ .+.+.+|+++++|.||+|+|+.|++ .+++..++ .++ +|.+.+|. .+++ .|+|||+|||+..+
T Consensus 256 ~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~-~l~~~~gl~~~~~~ggi~Vd~-~l~t-~~~IyA~GD~a~~~~~~~g~~~~ 332 (493)
T 1m6i_A 256 SGKLLIKLKDGRKVETDHIVAAVGLEPNV-ELAKTGGLEIDSDFGGFRVNA-ELQA-RSNIWVAGDAACFYDIKLGRRRV 332 (493)
T ss_dssp TTEEEEEETTSCEEEESEEEECCCEEECC-TTHHHHTCCBCTTTCSEECCT-TCEE-ETTEEECGGGEEEEETTTEEECC
T ss_pred CCeEEEEECCCCEEECCEEEECCCCCccH-HHHHHcCCccccCCCcEEECC-Cccc-CCCeeEeeeeEeccCcccCcccc
Confidence 2 3677899999999999999999998 67777776 343 47777774 5566 69999999998531
Q ss_pred ---ccchhhHHHHHHHHHHH
Q 035488 369 ---SGASLDAMSVALDIAKS 385 (408)
Q Consensus 369 ---~~a~~~a~~~a~~i~~~ 385 (408)
..|..||+.+|.+|.+.
T Consensus 333 ~~~~~A~~qg~~aa~ni~g~ 352 (493)
T 1m6i_A 333 EHHDHAVVSGRLAGENMTGA 352 (493)
T ss_dssp CCHHHHHHHHHHHHHHHTSC
T ss_pred chHHHHHHHHHHHHHHhcCC
Confidence 15889999999999864
No 82
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.96 E-value=6.7e-30 Score=255.05 Aligned_cols=291 Identities=15% Similarity=0.188 Sum_probs=177.8
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecC-C-------CCCCccCC-CCCCCeeeecC-------Ccc--ccC--
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERA-N-------CIASLWQN-RTYDRLKLHLP-------KQF--CQL-- 77 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~-~-------~~gg~w~~-~~~~~~~~~~~-------~~~--~~~-- 77 (408)
..+||+||||||||++||..|++.|++|+|||+. + .+||+|.. ..++...+... ... +..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~ 185 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSL 185 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCccc
Confidence 3579999999999999999999999999999973 2 24554321 10110000000 000 000
Q ss_pred CCCCCCCCCCCCCC------------------ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEE
Q 035488 78 PNFPFPEDFPRVPH------------------QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVV 139 (408)
Q Consensus 78 ~~~~~~~~~~~~~~------------------~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vVi 139 (408)
+......++..+.+ ..++++.. ..+..++ .+.+++.+.++.. .++.||+|||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~-~~~~~~~------~~~v~v~~~~g~~---~~~~~d~lvi 255 (598)
T 2x8g_A 186 DRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLN-AKGRLIS------PHEVQITDKNQKV---STITGNKIIL 255 (598)
T ss_dssp CGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEC-SEEEEEE------TTEEEEECTTCCE---EEEEEEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEE-EEEEEcC------CCEEEEEeCCCCe---EEEEeCEEEE
Confidence 00000001110000 11222211 1122221 1225444332222 4799999999
Q ss_pred eeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccC
Q 035488 140 ATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLG 219 (408)
Q Consensus 140 AtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~ 219 (408)
||| +.|..|++||...+ .++..+... ....+++++|||+|.+|+|+|..|++.|.+|++++|+ .++|..+.
T Consensus 256 AtG--s~p~~p~i~G~~~~---~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~--~~l~~~d~- 326 (598)
T 2x8g_A 256 ATG--ERPKYPEIPGAVEY---GITSDDLFS-LPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS--ILLRGFDQ- 326 (598)
T ss_dssp CCC--EEECCCSSTTHHHH---CEEHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CSSTTSCH-
T ss_pred eCC--CCCCCCCCCCcccc---eEcHHHHhh-CccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC--cCcCcCCH-
Confidence 999 68888889886532 233333322 2345778999999999999999999999999999987 34443322
Q ss_pred CchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--c
Q 035488 220 KSTFQLAVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--I 297 (408)
Q Consensus 220 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i 297 (408)
++...+ .+.+++.+|+++.+ +
T Consensus 327 ----~~~~~~-----------------------------------------------------~~~l~~~gv~i~~~~~v 349 (598)
T 2x8g_A 327 ----QMAEKV-----------------------------------------------------GDYMENHGVKFAKLCVP 349 (598)
T ss_dssp ----HHHHHH-----------------------------------------------------HHHHHHTTCEEEETEEE
T ss_pred ----HHHHHH-----------------------------------------------------HHHHHhCCCEEEECCeE
Confidence 222211 12233446666654 3
Q ss_pred cEEe--------C---CeE--E--EecCcEEc--cCEEEEcCCCCCCCCCc-cccccc-ccCCCCCCCCCCCCCCCCCce
Q 035488 298 KKFS--------P---GKV--E--LVNGQVLE--IDSVVLATGYRSNVPSW-LKENEF-FSENGIPKNPFPNGWKGKTGL 358 (408)
Q Consensus 298 ~~~~--------~---~~v--~--~~~g~~~~--~D~vi~atG~~~~~~~l-~~~~~~-~~~~g~~~~~~~~~~t~~~~i 358 (408)
.+++ . +.+ . +.+|++++ +|.||+|+|++|++..+ ++..++ .+.+|++.+| +.++|+.|+|
T Consensus 350 ~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~ts~~~V 428 (598)
T 2x8g_A 350 DEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCT-DDEQTTVSNV 428 (598)
T ss_dssp EEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCC-TTSBCSSTTE
T ss_pred EEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeC-CCCcCCCCCE
Confidence 4442 1 222 2 34676655 99999999999998333 455566 5678999998 4577999999
Q ss_pred EEEeecccc-Cc---cchhhHHHHHHHHHHH
Q 035488 359 YAVGFTKRG-LS---GASLDAMSVALDIAKS 385 (408)
Q Consensus 359 ya~Gd~~~~-~~---~a~~~a~~~a~~i~~~ 385 (408)
||+|||+.+ +. .|..||+.+|.+|.+.
T Consensus 429 yA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 429 YAIGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp EECGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 999999533 32 6789999999999864
No 83
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.96 E-value=2.3e-29 Score=241.92 Aligned_cols=302 Identities=18% Similarity=0.161 Sum_probs=181.2
Q ss_pred ccCCcEEECCChHHHHHHHHHHH-c------CCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKN-Q------GVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVP 90 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~-~------g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (408)
..++|+||||||+|+++|..|++ . |++|+|||+.+.++|+|++...+.... ...+. ..+..++
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~--~~~~~--------~~~~~~~ 71 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPK--IKSIS--------KQFEKTA 71 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTG--GGGGH--------HHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCC--HHHHH--------HHHHHHH
Confidence 35689999999999999999999 7 999999999988888875432111000 00000 0011122
Q ss_pred CccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCC--
Q 035488 91 HQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDY-- 168 (408)
Q Consensus 91 ~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~-- 168 (408)
.+.+++++.+.++ . +. |++.+ ..+.||+||+|||+. .+..|.+||.+ +.+ +++..++
T Consensus 72 ~~~~v~~~~~v~v------~--~~--v~~~~--------~~~~~d~lViAtG~~-~~~~~~ipG~~-~~g-v~~~~~~~~ 130 (456)
T 1lqt_A 72 EDPRFRFFGNVVV------G--EH--VQPGE--------LSERYDAVIYAVGAQ-SDRMLNIPGED-LPG-SIAAVDFVG 130 (456)
T ss_dssp TSTTEEEEESCCB------T--TT--BCHHH--------HHHHSSEEEECCCCC-EECCCCCTTTT-STT-EEEHHHHHH
T ss_pred hcCCCEEEeeEEE------C--CE--EEECC--------CeEeCCEEEEeeCCC-CCCCCCCCCCC-CCC-cEEHHHHHh
Confidence 2445555555332 1 22 44433 247899999999952 25666788865 222 3333221
Q ss_pred ---------CCCCCCCCCeEEEEccCCcHHHHHHHHhcc--------------------C-CccEEEEecCceeeccccc
Q 035488 169 ---------KSGASYRGKRVLVVGCGNSGMEVSLDLCNH--------------------N-AKPSMVVRSSVHVLPREVL 218 (408)
Q Consensus 169 ---------~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~--------------------g-~~V~~~~r~~~~~~p~~~~ 218 (408)
++.....+++|+|||+|++|+|+|..|+.. + .+|+++.|++ .+.+....
T Consensus 131 ~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~-~~~~~f~~ 209 (456)
T 1lqt_A 131 WYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG-PLQAAFTT 209 (456)
T ss_dssp HHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC-GGGCCCCH
T ss_pred hhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCC-hhhhccCh
Confidence 222234689999999999999999999974 4 4899999988 33221110
Q ss_pred -------CCc-------hHHH----HHHHHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccCh
Q 035488 219 -------GKS-------TFQL----AVLMMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDI 280 (408)
Q Consensus 219 -------~~~-------~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (408)
..+ ..++ ... ...++ ....+....+.+.. .+. .
T Consensus 210 ~elrel~~lp~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~l~~~~----~~~-~---------------------- 260 (456)
T 1lqt_A 210 LELRELADLDGVDVVIDPAELDGITDED-AAAVG-KVCKQNIKVLRGYA----DRE-P---------------------- 260 (456)
T ss_dssp HHHHHGGGCTTEEEECCGGGGTTCCHHH-HHHHC-HHHHHHHHHHHHHH----TCC------------------------
T ss_pred HHHHHhhcCCCceeeeChHHhccchhhh-hhhcc-HHHHHHHHHHHHHh----hcC-C----------------------
Confidence 000 0000 000 00000 00111111111100 000 0
Q ss_pred hhhhhhccCCeEEecC--ccEEeCC----eEEEe----------------cC--cEEccCEEEEcCCCCCCCCCcccccc
Q 035488 281 GALQKIRSGDIKVVPG--IKKFSPG----KVELV----------------NG--QVLEIDSVVLATGYRSNVPSWLKENE 336 (408)
Q Consensus 281 ~~~~~~~~~~i~~~~~--i~~~~~~----~v~~~----------------~g--~~~~~D~vi~atG~~~~~~~l~~~~~ 336 (408)
.-...+|+++.+ +.++.++ ++.+. +| ++++||.||+|+|++|+. + . +
T Consensus 261 ----~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~--l-~--g 331 (456)
T 1lqt_A 261 ----RPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP--T-P--G 331 (456)
T ss_dssp ----CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC--C-T--T
T ss_pred ----CCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC--C-C--C
Confidence 000135666665 6666543 24443 34 468999999999999996 2 2 3
Q ss_pred c-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc----cchhhHHHHHHHHHHHhhHH
Q 035488 337 F-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS----GASLDAMSVALDIAKSWKEE 389 (408)
Q Consensus 337 ~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~----~a~~~a~~~a~~i~~~~~~~ 389 (408)
+ ++.+|.+++|...+.++.|+|||+|||+.++. .|+.+|+.+|.+|..++...
T Consensus 332 l~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l~~~ 389 (456)
T 1lqt_A 332 LPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNA 389 (456)
T ss_dssp SCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 3 56778888774444489999999999986433 58899999999999998764
No 84
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.96 E-value=7.7e-30 Score=244.69 Aligned_cols=298 Identities=15% Similarity=0.141 Sum_probs=192.4
Q ss_pred CCcEEECCChHHHHHHHHHHH--cCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKN--QGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~--~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
++|+|||||++|+++|..|++ .|++|+|||+++.++.. .......... .........+..++.+.++++
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~-------~~~~~~~~g~--~~~~~~~~~~~~~~~~~gv~~ 73 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-------PAFPHLAMGW--RKFEDISVPLAPLLPKFNIEF 73 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-------GGHHHHHHTC--SCGGGSEEESTTTGGGGTEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC-------CCcchhccCc--cCHHHHHHHHHHHHHhcCCEE
Confidence 589999999999999999999 78999999999865421 1100000000 000011112334555668887
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCC----
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGAS---- 173 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~---- 173 (408)
+. .+|+.++... +. |++.++ .++.||+||+||| +.+..| |... .+...+.+...+...
T Consensus 74 ~~-~~v~~id~~~--~~--v~~~~g-------~~i~~d~liiAtG--~~~~~p---g~~~-~g~~~~~~~~~~a~~~~~~ 135 (430)
T 3h28_A 74 IN-EKAESIDPDA--NT--VTTQSG-------KKIEYDYLVIATG--PKLVFG---AEGQ-EENSTSICTAEHALETQKK 135 (430)
T ss_dssp EC-SCEEEEETTT--TE--EEETTC-------CEEECSEEEECCC--CEEECC---SBTH-HHHSCCCSSHHHHHHHHHH
T ss_pred EE-EEEEEEECCC--CE--EEECCC-------cEEECCEEEEcCC--cccccC---CCCC-cCCccCcCCHHHHHHHHHH
Confidence 75 5899998655 43 666654 4799999999999 555555 3221 111111111111100
Q ss_pred ----CCCCeEEEEccCCcH------HHHHHHH----hccC----CccEEEEecCceeecccccCCchHHHHHHHHhhcch
Q 035488 174 ----YRGKRVLVVGCGNSG------MEVSLDL----CNHN----AKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPL 235 (408)
Q Consensus 174 ----~~~~~v~VvG~G~~a------~e~a~~l----~~~g----~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~ 235 (408)
..+++++|||+|.+| +|+|..+ .+.| .+|+++.+.+ .+.+....+.+ +
T Consensus 136 ~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~-~~~~~~l~~~~--~----------- 201 (430)
T 3h28_A 136 LQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP-YLGHFGVGGIG--A----------- 201 (430)
T ss_dssp HHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS-STTCTTTTCST--T-----------
T ss_pred HHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCc-cccccccCcch--H-----------
Confidence 114467889987654 8888554 4455 4788888766 22111000000 0
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCeEEEec----
Q 035488 236 WLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGKVELVN---- 309 (408)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~~---- 309 (408)
......+.+++.+|+++.+ |++++++++.+.+
T Consensus 202 ------------------------------------------~~~~l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~ 239 (430)
T 3h28_A 202 ------------------------------------------SKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGN 239 (430)
T ss_dssp ------------------------------------------HHHHHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSC
T ss_pred ------------------------------------------HHHHHHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCC
Confidence 1111234456678999887 8999998888887
Q ss_pred CcEEccCEEEEcCCCCCCCCCcccc--cccccCCC-CCCCCCCCCCC-CCCceEEEeeccccC---------------cc
Q 035488 310 GQVLEIDSVVLATGYRSNVPSWLKE--NEFFSENG-IPKNPFPNGWK-GKTGLYAVGFTKRGL---------------SG 370 (408)
Q Consensus 310 g~~~~~D~vi~atG~~~~~~~l~~~--~~~~~~~g-~~~~~~~~~~t-~~~~iya~Gd~~~~~---------------~~ 370 (408)
++++++|.|++++|+.|+. ++.+ .++.+.+| ++.+|. ..++ +.|||||+|||+..+ ..
T Consensus 240 g~~i~~D~vv~a~G~~~~~--~l~~~~~gl~~~~G~~i~Vd~-~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~ 316 (430)
T 3h28_A 240 THEVPAKFTMFMPSFQGPE--VVASAGDKVANPANKMVIVNR-CFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMM 316 (430)
T ss_dssp EEEEECSEEEEECEEECCH--HHHTTCTTTBCTTTCCBCCCT-TSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHH
T ss_pred ceEEeeeEEEECCCCccch--hHhhccccCcCCCCCEEecCc-cccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHH
Confidence 7899999999999999874 3444 46778889 999985 5555 999999999997632 16
Q ss_pred chhhHHHHHHHHHHHhhHHhHhhhhhhhhhhccccc
Q 035488 371 ASLDAMSVALDIAKSWKEETKQKKKSIASRQRRCIS 406 (408)
Q Consensus 371 a~~~a~~~a~~i~~~~~~~~~~~~~~~~~~~~~~~~ 406 (408)
|..||+.+|.+|.+.+.+++.... ......|++
T Consensus 317 A~~~g~~aa~ni~~~l~g~~~~~~---~~~~~~~~~ 349 (430)
T 3h28_A 317 IEQMAMAVAHNIVNDIRNNPDKYA---PRLSAICIA 349 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEE---ECCCEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCc---CCcceEEEE
Confidence 889999999999999988654321 234456664
No 85
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.95 E-value=2.6e-29 Score=239.14 Aligned_cols=289 Identities=16% Similarity=0.145 Sum_probs=184.4
Q ss_pred CCcEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQG--VPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g--~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
|+|||||||+||+++|..|++.+ .+|+|||+++... +.+................. .+ +.+...++++
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~-------~~p~~~~v~~g~~~~~~~~~--~~-~~~~~~gv~~ 72 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYY-------TCYMSNEVIGGDRELASLRV--GY-DGLRAHGIQV 72 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEE-------CSTTHHHHHHTSSCGGGGEE--CS-HHHHHTTCEE
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCC-------CccCHHHHhcCCCCHHHHhh--CH-HHHHHCCCEE
Confidence 68999999999999999999886 5899999987432 11111110000000000000 00 0112346666
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcce-eeeeccCCCCC-----
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEG-NVMHAGDYKSG----- 171 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~-~~~~~~~~~~~----- 171 (408)
.. .+|+.|+... +. |++.++ .++.||+||+||| +.+..+.+||...... ...+.....+.
T Consensus 73 i~-~~v~~id~~~--~~--v~~~~g-------~~i~yd~LviAtG--~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~ 138 (401)
T 3vrd_B 73 VH-DSALGIDPDK--KL--VKTAGG-------AEFAYDRCVVAPG--IDLLYDKIEGYSEALAAKLPHAWKAGEQTALLR 138 (401)
T ss_dssp EC-SCEEEEETTT--TE--EEETTS-------CEEECSEEEECCC--EEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHH
T ss_pred EE-eEEEEEEccC--cE--EEeccc-------ceeecceeeeccC--CccccCCccCchhhcccCccceeccHHHHHHHH
Confidence 44 6899998765 44 677665 6899999999999 7778888888765321 12222211110
Q ss_pred ---CCCCCCeEEEEccCC-----------cHHHHHHHHhccC--CccEEEEecCceeecccccCCchHHHHHHHHhhcch
Q 035488 172 ---ASYRGKRVLVVGCGN-----------SGMEVSLDLCNHN--AKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPL 235 (408)
Q Consensus 172 ---~~~~~~~v~VvG~G~-----------~a~e~a~~l~~~g--~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~ 235 (408)
........+|++.|. .+.+++..+...+ .+|+++.+.+ .+.+.. .+...+...+
T Consensus 139 ~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~-~~~~~~-------~~~~~~~~~~-- 208 (401)
T 3vrd_B 139 RQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQ-TFSKQA-------QFTKGWERLY-- 208 (401)
T ss_dssp HHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSS-SCTTHH-------HHHHHHHHHS--
T ss_pred HHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccc-cccccc-------cccHHHHHHH--
Confidence 112233444444433 2345555555544 5788887766 221111 1111111111
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC----CeEEEec
Q 035488 236 WLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP----GKVELVN 309 (408)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~----~~v~~~~ 309 (408)
.+.+++.+|+++.+ +..++. ..+.+.+
T Consensus 209 -----------------------------------------------~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~ 241 (401)
T 3vrd_B 209 -----------------------------------------------GFGTENALIEWHPGPDAAVVKTDTEAMTVETSF 241 (401)
T ss_dssp -----------------------------------------------CTTSTTCSEEEECTTTTCEEEEETTTTEEEETT
T ss_pred -----------------------------------------------HHHHHhcCcEEEeCceEEEEEecccceEEEcCC
Confidence 23355678888876 555543 2488899
Q ss_pred CcEEccCEEEEcCCCCCCCCCcccccccccCCCCCCCCCCC-CCCCCCceEEEeeccccC---c---cchhhHHHHHHHH
Q 035488 310 GQVLEIDSVVLATGYRSNVPSWLKENEFFSENGIPKNPFPN-GWKGKTGLYAVGFTKRGL---S---GASLDAMSVALDI 382 (408)
Q Consensus 310 g~~~~~D~vi~atG~~~~~~~l~~~~~~~~~~g~~~~~~~~-~~t~~~~iya~Gd~~~~~---~---~a~~~a~~~a~~i 382 (408)
|+++++|++++++|.+|+ .++++.++.+++|++.+|..+ +.|+.|||||+|||+... . .|..||+.+|+||
T Consensus 242 g~~i~~D~vi~~~g~~~~--~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni 319 (401)
T 3vrd_B 242 GETFKAAVINLIPPQRAG--KIAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAV 319 (401)
T ss_dssp SCEEECSEEEECCCEEEC--HHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHH
T ss_pred CcEEEeeEEEEecCcCCc--hhHhhccccccCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHH
Confidence 999999999999999987 677888888899999998653 458999999999987532 1 6789999999999
Q ss_pred HHHhhHHhH
Q 035488 383 AKSWKEETK 391 (408)
Q Consensus 383 ~~~~~~~~~ 391 (408)
.+.+.++++
T Consensus 320 ~~~l~G~~~ 328 (401)
T 3vrd_B 320 VALLKGEEP 328 (401)
T ss_dssp HHHHHTCCC
T ss_pred HHHhcCCCC
Confidence 999988654
No 86
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.95 E-value=4.9e-29 Score=261.30 Aligned_cols=274 Identities=17% Similarity=0.202 Sum_probs=178.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCC----CCCCCcc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV-PFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDF----PRVPHQF 93 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 93 (408)
.+||+||||||||++||..|++.|+ +|+|||+.+.+||++.+.. +.+..+.+. .+++.+.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~i---------------p~~~~~~~~~~~~~~~~~~~ 251 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEI---------------PQFRLPYDVVNFEIELMKDL 251 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTS---------------CTTTSCHHHHHHHHHHHHTT
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccC---------------CcccCCHHHHHHHHHHHHHC
Confidence 5799999999999999999999999 7999999998998753221 111111000 1123355
Q ss_pred CccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCC-CCCCCcceeeeeccCC----
Q 035488 94 DINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEF-EGLQHFEGNVMHAGDY---- 168 (408)
Q Consensus 94 ~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~-~g~~~~~~~~~~~~~~---- 168 (408)
+++++.++.+.. +. |++.++ .++.||+||+|||+. .|..+++ +|..... .+++..++
T Consensus 252 gv~~~~~~~v~~-------~~--v~~~~~-------~~~~~d~vvlAtGa~-~p~~l~~~~G~~~~~-gv~~a~~~L~~~ 313 (1025)
T 1gte_A 252 GVKIICGKSLSE-------NE--ITLNTL-------KEEGYKAAFIGIGLP-EPKTDDIFQGLTQDQ-GFYTSKDFLPLV 313 (1025)
T ss_dssp TCEEEESCCBST-------TS--BCHHHH-------HHTTCCEEEECCCCC-EECCCGGGTTCCTTT-TEEEHHHHHHHH
T ss_pred CcEEEcccEecc-------ce--EEhhhc-------CccCCCEEEEecCCC-CCCCCCCCCCCCCCC-CEEEhHHHHHHH
Confidence 777777665521 11 333332 346799999999952 3554443 4543221 23332211
Q ss_pred ----------CC-CCCCCCCeEEEEccCCcHHHHHHHHhccCC-ccEEEEecCceeecccccCCchHHHHHHHHhhcchH
Q 035488 169 ----------KS-GASYRGKRVLVVGCGNSGMEVSLDLCNHNA-KPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLW 236 (408)
Q Consensus 169 ----------~~-~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~-~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~ 236 (408)
.. .....+++|+|||+|.+|+|+|..+.+.|. +|++++|++...+|.... ++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~-----e~----------- 377 (1025)
T 1gte_A 314 AKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPE-----EV----------- 377 (1025)
T ss_dssp HHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHH-----HH-----------
T ss_pred HhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHH-----HH-----------
Confidence 11 112346799999999999999999999996 899999987333332221 10
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC--Ce---EEEe-
Q 035488 237 LVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP--GK---VELV- 308 (408)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--~~---v~~~- 308 (408)
+.+++.+|+++.+ +.++.. +. +.+.
T Consensus 378 -----------------------------------------------~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~ 410 (1025)
T 1gte_A 378 -----------------------------------------------ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVR 410 (1025)
T ss_dssp -----------------------------------------------HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEE
T ss_pred -----------------------------------------------HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEE
Confidence 1112223443332 233321 11 1111
Q ss_pred ------------cC--cEEccCEEEEcCCCCCCCCCccccc-cc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc---
Q 035488 309 ------------NG--QVLEIDSVVLATGYRSNVPSWLKEN-EF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS--- 369 (408)
Q Consensus 309 ------------~g--~~~~~D~vi~atG~~~~~~~l~~~~-~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~--- 369 (408)
+| +++++|.||+|+|+.|+...|+.+. ++ .+.+|++.+|...++|+.|+|||+||++.++.
T Consensus 411 ~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~~~~ 490 (1025)
T 1gte_A 411 TEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANTTV 490 (1025)
T ss_dssp EEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCCCHH
T ss_pred eEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCchHHH
Confidence 12 4789999999999987643666553 55 56689999985468899999999999988654
Q ss_pred cchhhHHHHHHHHHHHhhH
Q 035488 370 GASLDAMSVALDIAKSWKE 388 (408)
Q Consensus 370 ~a~~~a~~~a~~i~~~~~~ 388 (408)
.|..+|+.+|.+|.+.+..
T Consensus 491 ~A~~~G~~aA~~i~~~L~~ 509 (1025)
T 1gte_A 491 ESVNDGKQASWYIHKYIQA 509 (1025)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 7889999999999988764
No 87
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.95 E-value=5e-29 Score=238.74 Aligned_cols=291 Identities=16% Similarity=0.165 Sum_probs=178.1
Q ss_pred CCcEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQG--VPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g--~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
++|||||||+||+++|..|++.+ ++|+|||+++.+. |.+.............. ....+..++.+.++++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~l~~v~~g~~~~~~--i~~~~~~~~~~~gv~~ 73 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPAFPHLAMGWRKFED--ISVPLAPLLPKFNIEF 73 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGGHHHHHHTCSCGGG--SEEESTTTGGGGTEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCccHHHHhcCCCCHHH--hhhcHHHHHHHCCcEE
Confidence 47999999999999999999976 7999999987532 32222111111111111 1112334555667777
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCC---CC--C
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYK---SG--A 172 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~---~~--~ 172 (408)
.. .+|++|+.+. +. |++.++ .++.||+||||||+ ++. +.+||..+....+.+..+.. +. .
T Consensus 74 i~-~~v~~Id~~~--~~--V~~~~g-------~~i~YD~LViAtG~--~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~ 138 (430)
T 3hyw_A 74 IN-EKAESIDPDA--NT--VTTQSG-------KKIEYDYLVIATGP--KLV-FGAEGQEENSTSICTAEHALETQKKLQE 138 (430)
T ss_dssp EC-SCEEEEETTT--TE--EEETTC-------CEEECSEEEECCCC--EEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHH
T ss_pred EE-eEEEEEECCC--CE--EEECCC-------CEEECCEEEEeCCC--Ccc-CCccCcccCcCCcccHHHHHHHHHHHHh
Confidence 65 5899998766 54 787765 58999999999994 433 45777653211111111000 00 0
Q ss_pred CCCCCeEEEEccCC------cHHHHHHH----HhccC----CccEEEEecCceeecccccCCchHHHHHHHHhhcchHHH
Q 035488 173 SYRGKRVLVVGCGN------SGMEVSLD----LCNHN----AKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLV 238 (408)
Q Consensus 173 ~~~~~~v~VvG~G~------~a~e~a~~----l~~~g----~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~ 238 (408)
....+.++|+|++. .+.|++.. +.+.+ .+|+++...+ .+.+.....
T Consensus 139 ~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~-~l~~~~~~~------------------- 198 (430)
T 3hyw_A 139 LYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP-YLGHFGVGG------------------- 198 (430)
T ss_dssp HHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS-STTCTTTTC-------------------
T ss_pred hccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccc-hhhhccchh-------------------
Confidence 01234556666542 12333333 33333 3566665544 111110000
Q ss_pred HHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCeEEEec----CcE
Q 035488 239 DKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGKVELVN----GQV 312 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~~----g~~ 312 (408)
.+.......+.+++.+|+++.+ +++++++.+.+.+ +++
T Consensus 199 ------------------------------------~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~ 242 (430)
T 3hyw_A 199 ------------------------------------IGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHE 242 (430)
T ss_dssp ------------------------------------STTHHHHHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEE
T ss_pred ------------------------------------hHHHHHHHHHHHHhCCeEEEeCceEEEEeCCceEEEeeCCCceE
Confidence 0000111234456678999988 8999999877764 358
Q ss_pred EccCEEEEcCCCCCCCCCccccc--cccc-CCCCCCCCCCCCCCCCCceEEEeeccccC------------c---cchhh
Q 035488 313 LEIDSVVLATGYRSNVPSWLKEN--EFFS-ENGIPKNPFPNGWKGKTGLYAVGFTKRGL------------S---GASLD 374 (408)
Q Consensus 313 ~~~D~vi~atG~~~~~~~l~~~~--~~~~-~~g~~~~~~~~~~t~~~~iya~Gd~~~~~------------~---~a~~~ 374 (408)
+++|++++++|.+|+ .++... .+.+ .+|++++|..++.|+.|||||+|||+..+ . .|..|
T Consensus 243 i~~d~vi~~~G~~~~--~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~q 320 (430)
T 3hyw_A 243 VPAKFTMFMPSFQGP--EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQM 320 (430)
T ss_dssp EECSEEEEECEEECC--HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHH
T ss_pred eecceEEEeccCCCc--hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHH
Confidence 999999999999998 444444 2333 45677888544559999999999997532 1 57899
Q ss_pred HHHHHHHHHHHhhHHhHh
Q 035488 375 AMSVALDIAKSWKEETKQ 392 (408)
Q Consensus 375 a~~~a~~i~~~~~~~~~~ 392 (408)
|+.+|+||.+.+++++..
T Consensus 321 g~~~A~Ni~~~l~g~~~~ 338 (430)
T 3hyw_A 321 AMAVAHNIVNDIRNNPDK 338 (430)
T ss_dssp HHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHhcCCCCC
Confidence 999999999999886543
No 88
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.95 E-value=2.3e-28 Score=235.14 Aligned_cols=304 Identities=17% Similarity=0.144 Sum_probs=180.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQG--VPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDIN 96 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g--~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (408)
.++|+||||||+|+++|..|++.| ++|+|||+.+.++|.|+....+.... ...+. ..+.+++.+++++
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~--~~~~~--------~~~~~~~~~~gv~ 75 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPE--VKNVI--------NTFTQTARSDRCA 75 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGG--GGGHH--------HHHHHHHTSTTEE
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCcc--HHHHH--------HHHHHHHHhCCcE
Confidence 468999999999999999999998 99999999998888875432211100 00000 0111223345667
Q ss_pred ccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCC--------
Q 035488 97 PRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDY-------- 168 (408)
Q Consensus 97 ~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~-------- 168 (408)
++.++.|. .. |++.+ ..+.||+||+|||+. .+..|++||.+. . .+++..++
T Consensus 76 ~~~~~~v~--------~~--V~~~~--------~~~~~d~lVlAtGs~-~~~~~~ipG~~~-~-gv~~~~~~~~~~~~~~ 134 (460)
T 1cjc_A 76 FYGNVEVG--------RD--VTVQE--------LQDAYHAVVLSYGAE-DHQALDIPGEEL-P-GVFSARAFVGWYNGLP 134 (460)
T ss_dssp EEBSCCBT--------TT--BCHHH--------HHHHSSEEEECCCCC-EECCCCCTTTTS-T-TEEEHHHHHHHHTTCG
T ss_pred EEeeeEEe--------eE--EEecc--------ceEEcCEEEEecCcC-CCCCCCCCCCCC-C-cEEEHHHHHHHhhcCc
Confidence 66665551 12 33332 246899999999953 236678888752 2 23333222
Q ss_pred --CCCC-CCCCCeEEEEccCCcHHHHHHHHh--------------------ccCC-ccEEEEecCceeecccccCCchHH
Q 035488 169 --KSGA-SYRGKRVLVVGCGNSGMEVSLDLC--------------------NHNA-KPSMVVRSSVHVLPREVLGKSTFQ 224 (408)
Q Consensus 169 --~~~~-~~~~~~v~VvG~G~~a~e~a~~l~--------------------~~g~-~V~~~~r~~~~~~p~~~~~~~~~~ 224 (408)
.... ...+++++|||+|.+|+|+|..|+ ..+. +|+++.|++....+... .+
T Consensus 135 d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~-----~e 209 (460)
T 1cjc_A 135 ENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTI-----KE 209 (460)
T ss_dssp GGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCH-----HH
T ss_pred cccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCH-----HH
Confidence 1111 236899999999999999999999 4576 79999998832111000 01
Q ss_pred HHHH--------------------HHhhcchHHHHHHHHHHHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhh
Q 035488 225 LAVL--------------------MMKYFPLWLVDKILLILARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQ 284 (408)
Q Consensus 225 ~~~~--------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (408)
+... ....++. ..++....+..........++.. ..
T Consensus 210 l~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~-----------------------~~ 265 (460)
T 1cjc_A 210 LREMIQLPGTRPMLDPADFLGLQDRIKEAAR-PRKRLMELLLRTATEKPGVEEAA-----------------------RR 265 (460)
T ss_dssp HHHHHTCTTEEEECCGGGGTTHHHHTTTSCH-HHHHHHHHHHHHHHSCCCHHHHH-----------------------HH
T ss_pred HHHhhcCCCceeEechhhhcchhhhhhhccH-HHHHHHHHHHHHHHhcccccccc-----------------------CC
Confidence 1110 0000110 01111111111100000000000 00
Q ss_pred hhccCCeEEecC--ccEEeCC-------eEEEe---------------cC--cEEccCEEEEcCCCCCCCCCccccccc-
Q 035488 285 KIRSGDIKVVPG--IKKFSPG-------KVELV---------------NG--QVLEIDSVVLATGYRSNVPSWLKENEF- 337 (408)
Q Consensus 285 ~~~~~~i~~~~~--i~~~~~~-------~v~~~---------------~g--~~~~~D~vi~atG~~~~~~~l~~~~~~- 337 (408)
.....+|+++.+ +.++.++ +|.+. +| +++++|+||+|+|++|+. + .++
T Consensus 266 ~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~--l---~gl~ 340 (460)
T 1cjc_A 266 ASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP--I---DPSV 340 (460)
T ss_dssp HTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC--C---CTTS
T ss_pred CCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC--C---CCCc
Confidence 011145666665 5555432 13332 34 579999999999999996 2 333
Q ss_pred -ccCCCCCCCCCCCCCCC-CCceEEEeeccccCc----cchhhHHHHHHHHHHHhhH
Q 035488 338 -FSENGIPKNPFPNGWKG-KTGLYAVGFTKRGLS----GASLDAMSVALDIAKSWKE 388 (408)
Q Consensus 338 -~~~~g~~~~~~~~~~t~-~~~iya~Gd~~~~~~----~a~~~a~~~a~~i~~~~~~ 388 (408)
++.+|.+++| +..+++ .|+|||+|||+.++. .|+.+|+.+|.+|...+..
T Consensus 341 ~~d~~g~i~vn-~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 341 PFDPKLGVVPN-MEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp CCBTTTTBCCE-ETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCeeEC-CCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 5667888877 456676 799999999986443 6889999999999998865
No 89
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.94 E-value=3.3e-29 Score=253.32 Aligned_cols=271 Identities=17% Similarity=0.108 Sum_probs=186.4
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeeeecCCccccCCCCCCCCCCCCCCCcc-Cc
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQF-DI 95 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 95 (408)
..+||+|||||++|+++|..|+++|++|+|||+++.+||+|... .+++.. .+... ...+.....++ ++
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~-----~~~~~-----~~~~~~~~~~~~gv 459 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLS-----AWGRV-----KEYREAVLAELPNV 459 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCG-----GGGHH-----HHHHHHHHHTCTTE
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchh-----HHHHH-----HHHHHHHHHHcCCC
Confidence 35799999999999999999999999999999999999876421 111110 00000 00000011122 44
Q ss_pred cccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCC------CCCCCCCCCCCcceeeeeccCCC
Q 035488 96 NPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAE------KIEPEFEGLQHFEGNVMHAGDYK 169 (408)
Q Consensus 96 ~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~------~~~p~~~g~~~~~~~~~~~~~~~ 169 (408)
+++++++| +..+. .++.||+||+|||.... +..|.+||.+. ..+++..++.
T Consensus 460 ~~~~~~~v--------------~~~~~-------~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~--~~v~~~~~~l 516 (690)
T 3k30_A 460 EIYRESPM--------------TGDDI-------VEFGFEHVITATGATWRTDGVARFHTTALPIAEG--MQVLGPDDLF 516 (690)
T ss_dssp EEESSCCC--------------CHHHH-------HHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTT--SEEECHHHHH
T ss_pred EEEECCee--------------cHHHH-------hhcCCCEEEEcCCCccccccccccCCCCCCCCCC--CcEEcHHHHh
Confidence 44443322 11111 35789999999995432 56778888763 3566666665
Q ss_pred CCCCCCCCeEEEEc--cCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHH
Q 035488 170 SGASYRGKRVLVVG--CGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILAR 247 (408)
Q Consensus 170 ~~~~~~~~~v~VvG--~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (408)
......+++|+||| +|.+|+|+|..|...|.+|+++++.+ .+.+..... .
T Consensus 517 ~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~-~l~~~~~~~----~----------------------- 568 (690)
T 3k30_A 517 AGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA-QVSSWTNNT----F----------------------- 568 (690)
T ss_dssp TTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS-STTGGGGGG----T-----------------------
T ss_pred CCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc-ccccccccc----h-----------------------
Confidence 55555788999999 99999999999999999999999887 333322110 0
Q ss_pred HHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCeEEEe-----cCcEEccCEEEE
Q 035488 248 LILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGKVELV-----NGQVLEIDSVVL 320 (408)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~-----~g~~~~~D~vi~ 320 (408)
....+.+.+++.+|+++.+ +++++++++.+. +++++++|.||+
T Consensus 569 ------------------------------~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~ 618 (690)
T 3k30_A 569 ------------------------------EVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVM 618 (690)
T ss_dssp ------------------------------CHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEE
T ss_pred ------------------------------hHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEE
Confidence 0111234456678898887 889988876543 456899999999
Q ss_pred cCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccCc--cchhhHHHHHHHHHHHhhHHhH
Q 035488 321 ATGYRSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS--GASLDAMSVALDIAKSWKEETK 391 (408)
Q Consensus 321 atG~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~--~a~~~a~~~a~~i~~~~~~~~~ 391 (408)
|+|++|+. .++...+.. +. .|+.|+||++|||+.... .|..||+.+|.+|.+.+.+.+.
T Consensus 619 A~G~~p~~-~l~~~l~~~---~~--------~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l~g~~~ 679 (690)
T 3k30_A 619 VTARLPRE-ELYLDLVAR---RD--------AGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLPSNDE 679 (690)
T ss_dssp ESCEEECC-HHHHHHHHH---HH--------HTSCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCCCCTTS
T ss_pred CCCCCCCh-HHHHHHhhh---hc--------ccCCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhccCCCC
Confidence 99999998 565544221 11 678899999999987543 7899999999999998776543
No 90
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.94 E-value=1e-27 Score=249.76 Aligned_cols=280 Identities=17% Similarity=0.187 Sum_probs=184.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCc-cCccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQ-FDINP 97 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 97 (408)
.+||+||||||||++||..|++.|++|+|||+++.+||+|.. . +.... + ..+...+.....+.+.+ .++++
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~-~-~k~~i--~----~~~~~~~~~~~~~~l~~~~~v~~ 199 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD-T-AGEQI--D----GMDSSAWIEQVTSELAEAEETTH 199 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG-S-SCCEE--T----TEEHHHHHHHHHHHHHHSTTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc-C-Ccccc--C----CCCHHHHHHHHHHHHhhcCCcEE
Confidence 478999999999999999999999999999999999987762 1 10000 0 00000000000001112 26778
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecC---------CCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccC-
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSS---------DSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGD- 167 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~---------~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~- 167 (408)
+.+++|.++.... ....+...... ..+ ....+.||+|||||| +.|..|++||.+. .+ +++...
T Consensus 200 ~~~~~V~~i~~~~--~~~~v~~~~~~~~v~~~~~~~~~-~~~~i~~d~lVlATG--s~p~~~~ipG~~~-~g-v~~~~~~ 272 (965)
T 2gag_A 200 LQRTTVFGSYDAN--YLIAAQRRTVHLDGPSGPGVSRE-RIWHIRAKQVVLATG--AHERPIVFENNDR-PG-IMLAGAV 272 (965)
T ss_dssp ESSEEEEEEETTT--EEEEEEECSTTCSSCCCTTCCSE-EEEEEEEEEEEECCC--EEECCCCCBTCCS-TT-EEEHHHH
T ss_pred EeCCEEEeeecCC--ceeeeEeecccccccccccCCCC-ceEEEECCEEEECCC--CccCCCCCCCCCC-CC-EEEhHHH
Confidence 8888898886432 11111110000 000 014799999999999 6677788888653 22 333211
Q ss_pred --CCC-CCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHH
Q 035488 168 --YKS-GASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLI 244 (408)
Q Consensus 168 --~~~-~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 244 (408)
+.. ....++++++|||+|.+|+|+|..|.+.|.+|+++++++ .+.+.
T Consensus 273 ~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~-~~~~~----------------------------- 322 (965)
T 2gag_A 273 RSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARS-SISAA----------------------------- 322 (965)
T ss_dssp HHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS-SCCHH-----------------------------
T ss_pred HHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC-ccchh-----------------------------
Confidence 111 123467899999999999999999999999999999987 22110
Q ss_pred HHHHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeC--C----eEEEec-------
Q 035488 245 LARLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSP--G----KVELVN------- 309 (408)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~--~----~v~~~~------- 309 (408)
.+.+++.+|+++.+ +.++++ + .|.+.+
T Consensus 323 --------------------------------------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~ 364 (965)
T 2gag_A 323 --------------------------------------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEAREL 364 (965)
T ss_dssp --------------------------------------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCE
T ss_pred --------------------------------------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCC
Confidence 12233456777766 677765 2 466654
Q ss_pred C--cEEccCEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCC----CCCCCceEEEeeccccCc--cchhhHHHHHHH
Q 035488 310 G--QVLEIDSVVLATGYRSNVPSWLKENEFFSENGIPKNPFPNG----WKGKTGLYAVGFTKRGLS--GASLDAMSVALD 381 (408)
Q Consensus 310 g--~~~~~D~vi~atG~~~~~~~l~~~~~~~~~~g~~~~~~~~~----~t~~~~iya~Gd~~~~~~--~a~~~a~~~a~~ 381 (408)
| +++++|.|++++|++|++ .++... .+.+.+|.... .|+.|+|||+|||++... .|..||+.+|.+
T Consensus 365 G~~~~i~~D~Vv~a~G~~P~~-~l~~~~-----~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l~~A~~~G~~aA~~ 438 (965)
T 2gag_A 365 GGTQRFEADVLAVAGGFNPVV-HLHSQR-----QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDTASALSTGAATGAA 438 (965)
T ss_dssp EEEEEEECSEEEEECCEEECC-HHHHHT-----TCCEEEETTTTEEEECSCCTTEEECGGGGTCCSHHHHHHHHHHHHHH
T ss_pred CceEEEEcCEEEECCCcCcCh-HHHHhC-----CCcEEEcCcccccccCCCCCCEEEEEecCCchhHHHHHHHHHHHHHH
Confidence 4 679999999999999998 555433 33444442222 278999999999987543 788999999999
Q ss_pred HHHHhh
Q 035488 382 IAKSWK 387 (408)
Q Consensus 382 i~~~~~ 387 (408)
|.+.+.
T Consensus 439 i~~~lg 444 (965)
T 2gag_A 439 AATAAG 444 (965)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 998775
No 91
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.93 E-value=5.7e-28 Score=245.25 Aligned_cols=276 Identities=18% Similarity=0.217 Sum_probs=181.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
.++|+||||||||++||..|+++|++|+|||+.+.+||+|... .+++.. .+. ...++.. ..+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~-----------~~~---~~~~~~~-~~i~~ 453 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLG-----------EWS---YHRDYRE-TQITK 453 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCG-----------GGH---HHHHHHH-HHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChH-----------HHH---HHHHHHH-HHHHH
Confidence 5789999999999999999999999999999999999877531 111110 000 0000000 01111
Q ss_pred c--ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCC------CCCCCCCCCCCcceeeeeccCCC
Q 035488 98 R--FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAE------KIEPEFEGLQHFEGNVMHAGDYK 169 (408)
Q Consensus 98 ~--~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~------~~~p~~~g~~~~~~~~~~~~~~~ 169 (408)
. .+..++.+.. + .. |++.++ ..+.||+||+|||+... |..|++||.+.+...+++..++.
T Consensus 454 ~~~~~~~~v~i~~-~--~~--v~~~~~-------~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l 521 (729)
T 1o94_A 454 LLKKNKESQLALG-Q--KP--MTADDV-------LQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVM 521 (729)
T ss_dssp HHHHSTTCEEECS-C--CC--CCHHHH-------HTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHH
T ss_pred hhcccCCceEEEe-C--eE--Eehhhc-------cccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHh
Confidence 1 1112222221 1 11 333332 35789999999995322 56778888764333456655554
Q ss_pred CCCCCCCCeEEEEc--cCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHH
Q 035488 170 SGASYRGKRVLVVG--CGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILAR 247 (408)
Q Consensus 170 ~~~~~~~~~v~VvG--~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 247 (408)
......+++|+||| +|.+|+|+|..|++.|.+|+++++.+ +.+...... .
T Consensus 522 ~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~--l~~~~~~~~---~----------------------- 573 (729)
T 1o94_A 522 DGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH--LANYMHFTL---E----------------------- 573 (729)
T ss_dssp HCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC--TTHHHHHTT---C-----------------------
T ss_pred cCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc--ccccccccc---c-----------------------
Confidence 44445688999999 99999999999999999999999877 322110000 0
Q ss_pred HHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCCeEEEe----cC-cE--------
Q 035488 248 LILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGKVELV----NG-QV-------- 312 (408)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~~----~g-~~-------- 312 (408)
.....+.+++.+|+++.+ +.+++++++.+. ++ +.
T Consensus 574 -------------------------------~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~ 622 (729)
T 1o94_A 574 -------------------------------YPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVS 622 (729)
T ss_dssp -------------------------------HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSC
T ss_pred -------------------------------HHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEeccccccc
Confidence 001123445668888887 788887765442 32 22
Q ss_pred ----------EccCEEEEcCCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccCc--cchhhHHHHHH
Q 035488 313 ----------LEIDSVVLATGYRSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS--GASLDAMSVAL 380 (408)
Q Consensus 313 ----------~~~D~vi~atG~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~--~a~~~a~~~a~ 380 (408)
+++|.||+|+|++|+. .++++... .+| ..++|+.|+||++|||+.... .|..||+.+|.
T Consensus 623 ~~~~~~~~~~i~aD~Vv~a~G~~p~~-~l~~~l~~-------~vd-~~~~t~~~~VyAiGD~~~~~~~~~A~~~G~~aA~ 693 (729)
T 1o94_A 623 PRDANTSHRWIEFDSLVLVTGRHSEC-TLWNELKA-------RES-EWAENDIKGIYLIGDAEAPRLIADATFTGHRVAR 693 (729)
T ss_dssp SSCCCCCCEEEECSEEEEESCEEECC-HHHHHHHH-------TGG-GTGGGTCCEEEECGGGTSCCCHHHHHHHHHHHHH
T ss_pred ccccCCcceeeeCCEEEECCCCCCCh-HHHHHHhh-------hcc-cccccCCCCeEEEeCccchhhHHHHHHHHHHHHH
Confidence 8999999999999998 56554322 123 356688999999999987433 68899999999
Q ss_pred HHHHHhhHH
Q 035488 381 DIAKSWKEE 389 (408)
Q Consensus 381 ~i~~~~~~~ 389 (408)
+|.+.+...
T Consensus 694 ~i~~~l~~~ 702 (729)
T 1o94_A 694 EIEEANPQI 702 (729)
T ss_dssp TTTSSCTTS
T ss_pred HhhhhcccC
Confidence 998876543
No 92
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.92 E-value=3.5e-26 Score=230.66 Aligned_cols=278 Identities=20% Similarity=0.317 Sum_probs=168.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC-CCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR-TYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
.+||+|||||+||++||..|++.|++|+|||+++.+||+|... ..+.. ..+.. ....+...+.+.++++
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~~gv~~ 442 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGK-----EEFYE-----TLRYYRRMIEVTGVTL 442 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTC-----TTHHH-----HHHHHHHHHHHHTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCH-----HHHHH-----HHHHHHHHHHHcCCEE
Confidence 5789999999999999999999999999999999998876421 01000 00000 0000001112334455
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEE-EeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEY-ICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRG 176 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i-~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~ 176 (408)
+.++.|.. ..+ .||+||+||| +.|..|.+||.+. ..+++.++........+
T Consensus 443 ~~~~~v~~------------------------~~~~~~d~lviAtG--~~p~~~~i~G~~~--~~v~~~~~~l~~~~~~~ 494 (671)
T 1ps9_A 443 KLNHTVTA------------------------DQLQAFDETILASG--IVPRTPPIDGIDH--PKVLSYLDVLRDKAPVG 494 (671)
T ss_dssp EESCCCCS------------------------SSSCCSSEEEECCC--EEECCCCCBTTTS--TTEEEHHHHHTSCCCCC
T ss_pred EeCcEecH------------------------HHhhcCCEEEEccC--CCcCCCCCCCCCC--CcEeeHHHHhhCCCCCC
Confidence 44443310 123 7999999999 6888888998764 23555555544444578
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC--ceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhh
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS--VHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVE 254 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~--~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 254 (408)
++|+|||+|.+|+|+|..|++.|.+|++....- .|-...... ... ...
T Consensus 495 ~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~-----~~~-------------------------~~~ 544 (671)
T 1ps9_A 495 NKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQ-----QAG-------------------------GLS 544 (671)
T ss_dssp SEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCC-----SGG-------------------------GBC
T ss_pred CeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccc-----ccc-------------------------ccc
Confidence 999999999999999999999998776421000 000000000 000 000
Q ss_pred --hcCCCCCCCCCccccc-----CC-CCCcccChhhhhhhccCCeEEecC--ccEEeCCeEEE-ecC--cEEccCEEEEc
Q 035488 255 --KYGLKRPPTGPIELKN-----NE-GKTPVLDIGALQKIRSGDIKVVPG--IKKFSPGKVEL-VNG--QVLEIDSVVLA 321 (408)
Q Consensus 255 --~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~~v~~-~~g--~~~~~D~vi~a 321 (408)
........ ....+.. .. ...+.......+.+++.+|+++.+ +++++++++.+ .+| +++++|.||+|
T Consensus 545 ~~~~~~~~~~-~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a 623 (671)
T 1ps9_A 545 PQGMQIPRSP-RQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVIC 623 (671)
T ss_dssp TTCCCCCCCS-SEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEECCSEEEEC
T ss_pred ccccccCCCC-cEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEEC
Confidence 00000000 0000000 00 000111122345677789999988 78898888777 677 57999999999
Q ss_pred CCCCCCCCCcccccccccCCCCCCCCCCCCCCCCCceEEEeeccccC----ccchhhHHHHHHHH
Q 035488 322 TGYRSNVPSWLKENEFFSENGIPKNPFPNGWKGKTGLYAVGFTKRGL----SGASLDAMSVALDI 382 (408)
Q Consensus 322 tG~~~~~~~l~~~~~~~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~----~~a~~~a~~~a~~i 382 (408)
+|++|++ .+++.+ .. ..++||++|||+... ..|..||+.+|.+|
T Consensus 624 ~G~~p~~-~l~~~l---~~-------------~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 624 AGQEPNR-ALAQPL---ID-------------SGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp CCEEECC-TTHHHH---HT-------------TTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred CCccccH-HHHHHH---Hh-------------cCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 9999998 565432 11 125899999997643 26888999988874
No 93
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.91 E-value=6.5e-26 Score=220.61 Aligned_cols=251 Identities=17% Similarity=0.205 Sum_probs=170.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCC--CCCCCCCCCCCCccCcc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPN--FPFPEDFPRVPHQFDIN 96 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 96 (408)
.+||+|||||++|+++|..|++. ++|+|||+++.+||.|....+.. +.++. ..+...+.+.+ +.+++
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~---------~g~~~~~~~~~~~l~~~l-~~~v~ 176 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQ---------EGFNKDSRKVVEELVGKL-NENTK 176 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEE---------TTTTEEHHHHHHHHHHTC-CTTEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeecccccc---------CCCCCCHHHHHHHHHHHH-hcCCE
Confidence 46999999999999999999999 99999999999998765321110 00000 00000001111 34778
Q ss_pred ccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCC---C-CC
Q 035488 97 PRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYK---S-GA 172 (408)
Q Consensus 97 ~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~---~-~~ 172 (408)
++++++|.+++... +.+.+...+. +. ...+.||+||+||| +.+..|++||.+. .+ +++..+.. . ..
T Consensus 177 ~~~~~~v~~i~~~~--~~~~~~~~~~-~~---~~~~~~d~lvlAtG--a~~~~~~~~g~~~-~g-v~~~~~~~~~~~~~~ 246 (493)
T 1y56_A 177 IYLETSALGVFDKG--EYFLVPVVRG-DK---LIEILAKRVVLATG--AIDSTMLFENNDM-PG-VFRRDFALEVMNVWE 246 (493)
T ss_dssp EETTEEECCCEECS--SSEEEEEEET-TE---EEEEEESCEEECCC--EEECCCCCTTTTS-TT-EEEHHHHHHHHHTSC
T ss_pred EEcCCEEEEEEcCC--cEEEEEEecC-Ce---EEEEECCEEEECCC--CCccCCCCCCCCC-CC-EEEcHHHHHHHHhcc
Confidence 88899999998776 5555544322 11 13799999999999 6777778887653 21 23322111 1 11
Q ss_pred CCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhh
Q 035488 173 SYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGN 252 (408)
Q Consensus 173 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (408)
..++++++|||+|.+|+| ..+.+.|.
T Consensus 247 ~~~~~~vvViGgG~~gle--~~l~~~GV---------------------------------------------------- 272 (493)
T 1y56_A 247 VAPGRKVAVTGSKADEVI--QELERWGI---------------------------------------------------- 272 (493)
T ss_dssp BCSCSEEEEESTTHHHHH--HHHHHHTC----------------------------------------------------
T ss_pred cCCCCEEEEECCCHHHHH--HHHHhCCc----------------------------------------------------
Confidence 346789999999999998 23333332
Q ss_pred hhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC----eEEEecCcEEccCEEEEcCCCCC
Q 035488 253 VEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG----KVELVNGQVLEIDSVVLATGYRS 326 (408)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~----~v~~~~g~~~~~D~vi~atG~~~ 326 (408)
+++.+ +.+++++ .+.+.+|+++++|.||+|+|+.|
T Consensus 273 ---------------------------------------~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 273 ---------------------------------------DYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp ---------------------------------------EEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEE
T ss_pred ---------------------------------------EEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCc
Confidence 22222 3333322 25667888999999999999999
Q ss_pred CCCCccccccc---ccCCCCCC-CCCCCCCCCCCceEEEeeccccCc--cchhhHHHHHHHHHHHh
Q 035488 327 NVPSWLKENEF---FSENGIPK-NPFPNGWKGKTGLYAVGFTKRGLS--GASLDAMSVALDIAKSW 386 (408)
Q Consensus 327 ~~~~l~~~~~~---~~~~g~~~-~~~~~~~t~~~~iya~Gd~~~~~~--~a~~~a~~~a~~i~~~~ 386 (408)
+. .+++..++ ++.+|++. +| +.++ +.|+||++||++.... .|..||+.+|.+|.+.+
T Consensus 314 ~~-~l~~~~g~~~~~~~~g~i~~vd-~~~~-s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 314 DI-NPITQAGGKLRFRRGYYSPVLD-EYHR-IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp CC-HHHHHTTCCEEEETTEEEECCC-TTSE-EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred Cc-hHHHhcCCCccccCCceeeccc-cccC-cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHc
Confidence 98 67777665 24577765 56 3455 8899999999987543 78899999999999876
No 94
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.70 E-value=9.6e-20 Score=167.99 Aligned_cols=150 Identities=11% Similarity=-0.005 Sum_probs=96.2
Q ss_pred cCCcEEECCChHHHHHHHHHHH--cCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN--QGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDIN 96 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~--~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (408)
.+||+||||||||++||++|++ .|++|+|||+.+.+||..... +.. .++.. ........+++++++
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~---~~~--~~~~~-------l~~~~~~~~~e~Gv~ 132 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLG---GQL--FSAMV-------MRKPAHLFLQELEIP 132 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCC---STT--CCCEE-------EETTTHHHHHHTTCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeC---Ccc--CCHHH-------HHHHHHHHHHHcCCE
Confidence 5799999999999999999975 499999999999998853321 100 00000 000000111122222
Q ss_pred ccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCC
Q 035488 97 PRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRG 176 (408)
Q Consensus 97 ~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~ 176 (408)
+.. ... .....+.++++++ ..+..+.++|...+.+.....+..++...+.+
T Consensus 133 ~~~--------------------~~~-------~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 183 (326)
T 3fpz_A 133 YED--------------------EGD-------YVVVKHAALFIST--VLSKVLQLPNVKLFNATCVEDLVTRPPTEKGE 183 (326)
T ss_dssp CEE--------------------CSS-------EEEESCHHHHHHH--HHHHHHTSTTEEEETTEEEEEEEEESSCSSSS
T ss_pred EEE--------------------CCc-------ceecceeEEEEcc--hhhhccccccceeecccccceeeccCCcccCC
Confidence 211 110 3445555566666 44555567776655444444444455566688
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
++++|+|+|.++++.|..+...+.++++..+..
T Consensus 184 ~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~ 216 (326)
T 3fpz_A 184 VTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGY 216 (326)
T ss_dssp CEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCB
T ss_pred CEEEEEccCceeeehhhhhhhccCcEEEEeecc
Confidence 999999999999999999999999999887654
No 95
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.68 E-value=1.5e-16 Score=133.45 Aligned_cols=159 Identities=19% Similarity=0.175 Sum_probs=108.9
Q ss_pred eEEEEccCCcHHHHHHHHhccCCccEEEEecCceeeccccc--CCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhh
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVL--GKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVEK 255 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (408)
+++|||+|.+|+++|..|++.|.+|+++.+++ ..++.... ..+. ++.
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~-~~~~~~~~~~~~~~----------~~~-------------------- 51 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGR-SKVKGVSRVPNYPG----------LLD-------------------- 51 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CTTTTCSCCCCSTT----------CTT--------------------
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-CcccCchhhhccCC----------CcC--------------------
Confidence 69999999999999999999999999999987 22221000 0000 000
Q ss_pred cCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC-ccEEeCC----eEEEecCcEEccCEEEEcCCCCCCCCC
Q 035488 256 YGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG-IKKFSPG----KVELVNGQVLEIDSVVLATGYRSNVPS 330 (408)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~----~v~~~~g~~~~~D~vi~atG~~~~~~~ 330 (408)
....+.+.....+.+++.+++++.+ +++++.+ .+.+.+| ++++|.||+|+|..|+.
T Consensus 52 ----------------~~~~~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~-- 112 (180)
T 2ywl_A 52 ----------------EPSGEELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTL-- 112 (180)
T ss_dssp ----------------CCCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHH--
T ss_pred ----------------CCCHHHHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCc--
Confidence 0000111112233344456666665 6666532 2556677 89999999999999853
Q ss_pred ccccccc-ccCCCCCCCCCCCCCCCCCceEEEeeccccCc----cchhhHHHHHHHHHHHhhHH
Q 035488 331 WLKENEF-FSENGIPKNPFPNGWKGKTGLYAVGFTKRGLS----GASLDAMSVALDIAKSWKEE 389 (408)
Q Consensus 331 l~~~~~~-~~~~g~~~~~~~~~~t~~~~iya~Gd~~~~~~----~a~~~a~~~a~~i~~~~~~~ 389 (408)
++..++ .+ +|.+.+| +..+|+.|+|||+|||+.... .|..||+.+|.+|.+.+++.
T Consensus 113 -~~~~g~~~~-~g~i~vd-~~~~t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 173 (180)
T 2ywl_A 113 -PSLLGLTRR-GAYIDTD-EGGRTSYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDLRGE 173 (180)
T ss_dssp -HHHHTCCEE-TTEECCC-TTCBCSSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred -cccCCCCcc-CceEEeC-CCCCcCCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHhhhc
Confidence 444455 45 8888888 567889999999999987643 68899999999999887654
No 96
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.42 E-value=3e-14 Score=134.55 Aligned_cols=171 Identities=18% Similarity=0.211 Sum_probs=100.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCC---------CCCCC-ee-ee-cCCccc-----------
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQN---------RTYDR-LK-LH-LPKQFC----------- 75 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~---------~~~~~-~~-~~-~~~~~~----------- 75 (408)
.+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+.|.. +.... .. +. .+....
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 469999999999999999999999999999999887653310 00000 00 00 000000
Q ss_pred -------cCCCC------CCCCC--------CCCCCCccCccccccceeEEEEEc----CCCCcEEEEEeecCCCCcceE
Q 035488 76 -------QLPNF------PFPED--------FPRVPHQFDINPRFNETVQSAKYD----ETFGFWRIKTISSSDSSFCEV 130 (408)
Q Consensus 76 -------~~~~~------~~~~~--------~~~~~~~~~~~~~~~~~V~~i~~~----~~~~~~~V~~~~~~~~~~~~~ 130 (408)
..+.. .++.+ +.+.+.+.+++++++++|+++..+ . +.|.|++.+ .
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~--~~~~v~~~~--------g 153 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK--VRFVLQVNS--------T 153 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS--CCEEEEETT--------E
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC--CeEEEEECC--------C
Confidence 00000 00000 000111568889999999999866 3 457776644 4
Q ss_pred EEEeCEEEEeeCCCCCCC------------------CCCCCCCCCcceeeeeccC-C---CCCCCCCCCeEEEEc-----
Q 035488 131 EYICRWLVVATGENAEKI------------------EPEFEGLQHFEGNVMHAGD-Y---KSGASYRGKRVLVVG----- 183 (408)
Q Consensus 131 ~i~ad~vViAtG~~~~~~------------------~p~~~g~~~~~~~~~~~~~-~---~~~~~~~~~~v~VvG----- 183 (408)
+++||+||+|||.++.|. .|..|+...+ .++... + ..... .+.++.|+|
T Consensus 154 ~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~---~~~~~~~~~~~l~g~~-~~~~~~i~G~~~~~ 229 (401)
T 2gqf_A 154 QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPF---TYRETDKFLTALSGIS-LPVTITALCGKSFY 229 (401)
T ss_dssp EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCE---ECCGGGGGGGGGTTCE-EEEEEEETTSCEEE
T ss_pred EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeece---ecCCchhhcccCCCee-eeeEEEEcCCceEE
Confidence 799999999999766443 1223332221 111211 1 11111 134565668
Q ss_pred ----------cCCcHHHHHHHHhccCCccEE
Q 035488 184 ----------CGNSGMEVSLDLCNHNAKPSM 204 (408)
Q Consensus 184 ----------~G~~a~e~a~~l~~~g~~V~~ 204 (408)
+|.++++++..+.. +.++++
T Consensus 230 g~~l~t~~g~sG~~~l~~s~~~~~-~~~~~i 259 (401)
T 2gqf_A 230 NQLLFTHRGISGPAVLQISNYWQP-TESVEI 259 (401)
T ss_dssp EEEEECSSEEESHHHHHHTTTCCT-TCCEEE
T ss_pred eCEEEECCCccHHHHHHHHHHHhc-CCEEEE
Confidence 89999999998866 666664
No 97
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.40 E-value=5.3e-14 Score=135.78 Aligned_cols=35 Identities=20% Similarity=0.383 Sum_probs=32.3
Q ss_pred CcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIAS 56 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg 56 (408)
||+|||||++|+++|..|++.|.+|+|+||. ..+|
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g 35 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGG 35 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCc
Confidence 6999999999999999999999999999998 4444
No 98
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.23 E-value=6.6e-12 Score=118.87 Aligned_cols=120 Identities=16% Similarity=0.178 Sum_probs=76.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC------------CCCCeeeecCCccc-----------
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR------------TYDRLKLHLPKQFC----------- 75 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~------------~~~~~~~~~~~~~~----------- 75 (408)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.+|+.+... .........+....
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 4799999999999999999999999999999999877533100 00000000000000
Q ss_pred -------cCC------CCCCCCC--------CCCCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEe
Q 035488 76 -------QLP------NFPFPED--------FPRVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYIC 134 (408)
Q Consensus 76 -------~~~------~~~~~~~--------~~~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~a 134 (408)
..+ ...++.. +.+.+.+.+++++++++|+++..++ +.|.|++.+ .++.|
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~~~V~~~~--------g~i~a 176 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA--SGFRVTTSA--------GTVDA 176 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEEEEEETT--------EEEEE
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEEEEEECC--------cEEEe
Confidence 000 0000000 0001115688999999999998876 567777765 48999
Q ss_pred CEEEEeeCCCCCCC
Q 035488 135 RWLVVATGENAEKI 148 (408)
Q Consensus 135 d~vViAtG~~~~~~ 148 (408)
|+||+|+|.++.|.
T Consensus 177 d~VIlAtG~~S~p~ 190 (417)
T 3v76_A 177 ASLVVASGGKSIPK 190 (417)
T ss_dssp SEEEECCCCSSCGG
T ss_pred eEEEECCCCccCCC
Confidence 99999999876443
No 99
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.19 E-value=2.9e-11 Score=113.95 Aligned_cols=39 Identities=23% Similarity=0.391 Sum_probs=36.1
Q ss_pred cccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 17 IWVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 17 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
|..|||+||||||+|+++|..|+++|++|+||||.+.++
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~ 40 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIG 40 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 567899999999999999999999999999999987665
No 100
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.17 E-value=4.1e-11 Score=104.36 Aligned_cols=170 Identities=19% Similarity=0.134 Sum_probs=96.8
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeeccccc----CCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhh
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVL----GKSTFQLAVLMMKYFPLWLVDKILLILARLILGN 252 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (408)
-+|+|||+|.+|+++|..|++.|.+|++++++....- .... +.....+.. .+. +
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G-~~~~~~~~~~~~~~~~~----~~~-----------------d 61 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM-MPFLPPKPPFPPGSLLE----RAY-----------------D 61 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT-CCSSCCCSCCCTTCHHH----HHC-----------------C
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC-cccCccccccchhhHHh----hhc-----------------c
Confidence 4799999999999999999999999999998731110 0000 000000000 000 0
Q ss_pred hhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccC-CeEEecC-ccEEe--CC---eEEEecCcEEccCEEEEcCCCC
Q 035488 253 VEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSG-DIKVVPG-IKKFS--PG---KVELVNGQVLEIDSVVLATGYR 325 (408)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-i~~~~--~~---~v~~~~g~~~~~D~vi~atG~~ 325 (408)
..+ ..+..+...+.+.+++. +++++.. ++++. ++ .+.+.+|+++++|.||+|+|..
T Consensus 62 --~~g---------------~~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 62 --PKD---------------ERVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp --TTC---------------CCHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred --CCC---------------CCHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 000 00112222334445554 7877744 66654 33 3566788889999999999996
Q ss_pred CCCCC-------------------c---ccccccccC---------CCCCCC------------C-CCCCCCCCCceEEE
Q 035488 326 SNVPS-------------------W---LKENEFFSE---------NGIPKN------------P-FPNGWKGKTGLYAV 361 (408)
Q Consensus 326 ~~~~~-------------------l---~~~~~~~~~---------~g~~~~------------~-~~~~~t~~~~iya~ 361 (408)
++... + +.+.++... .|.|.. + .....|+.|+||++
T Consensus 125 s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~ 204 (232)
T 2cul_A 125 LGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAV 204 (232)
T ss_dssp SSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEEC
T ss_pred hhhceecCCccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceee
Confidence 65411 1 001111000 011100 0 00122689999999
Q ss_pred eeccccCc---cchhhHHHHHHHHHHHh
Q 035488 362 GFTKRGLS---GASLDAMSVALDIAKSW 386 (408)
Q Consensus 362 Gd~~~~~~---~a~~~a~~~a~~i~~~~ 386 (408)
|||+ ... .+..||+.+|.+|...+
T Consensus 205 G~~a-~~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 205 GLCV-REGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp GGGT-SCCCHHHHHHHHHHHHHHHHHHC
T ss_pred eecc-cCccHHHHHHHHHHHHHHHHhhc
Confidence 9998 433 56899999999998875
No 101
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.14 E-value=5.8e-11 Score=109.86 Aligned_cols=116 Identities=15% Similarity=0.202 Sum_probs=76.1
Q ss_pred cCCcEEECCChHHHHHHHHHHH---cCCCEEEEecCCCCCCccCCCC---CCCeeeecCCccccC---------------
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN---QGVPFIILERANCIASLWQNRT---YDRLKLHLPKQFCQL--------------- 77 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~---~g~~v~lie~~~~~gg~w~~~~---~~~~~~~~~~~~~~~--------------- 77 (408)
|+||+|||||++|+++|..|++ .|++|+|+||.+.+||.|.... +.....+....++..
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 80 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDEL 80 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHH
Confidence 3589999999999999999999 9999999999999988654321 111111111111000
Q ss_pred ------CCCC----------------CCCCCCCCCC----ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEE
Q 035488 78 ------PNFP----------------FPEDFPRVPH----QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVE 131 (408)
Q Consensus 78 ------~~~~----------------~~~~~~~~~~----~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~ 131 (408)
..+. ....+..+.+ +.+++++++++|++++..+ +.|+|++.++ ..
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~--~~~~v~~~~g-------~~ 151 (342)
T 3qj4_A 81 LAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRD--DKWEVSKQTG-------SP 151 (342)
T ss_dssp HHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECS--SSEEEEESSS-------CC
T ss_pred HhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcC--CEEEEEECCC-------CE
Confidence 0000 0000000000 3378899999999999876 6788887664 35
Q ss_pred EEeCEEEEeeCC
Q 035488 132 YICRWLVVATGE 143 (408)
Q Consensus 132 i~ad~vViAtG~ 143 (408)
+.+|+||+|+..
T Consensus 152 ~~ad~vV~A~p~ 163 (342)
T 3qj4_A 152 EQFDLIVLTMPV 163 (342)
T ss_dssp EEESEEEECSCH
T ss_pred EEcCEEEECCCH
Confidence 799999999984
No 102
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.14 E-value=2.2e-11 Score=112.35 Aligned_cols=118 Identities=16% Similarity=0.212 Sum_probs=75.0
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCcccc-----------------------
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQ----------------------- 76 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~----------------------- 76 (408)
+||+|||||++|+++|..|++.|++|+|||+.+.+||.+..........+....+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 589999999999999999999999999999998887755432111111111000000
Q ss_pred -----CCCCC---CCCCCCCCCC-----------ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEE
Q 035488 77 -----LPNFP---FPEDFPRVPH-----------QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWL 137 (408)
Q Consensus 77 -----~~~~~---~~~~~~~~~~-----------~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~v 137 (408)
..... .......+.. ..+++++++++|++++..+ +.|+|++.++ .....+|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~--~~~~v~~~~g------~~~~~a~~v 154 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGE--EHWNLLDAEG------QNHGPFSHV 154 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEEEEEECS--SCEEEEETTS------CEEEEESEE
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHHccCcEEecCEEEEEEEeC--CEEEEEeCCC------cCccccCEE
Confidence 00000 0000000000 2267889999999999876 6677876554 134469999
Q ss_pred EEeeCCCC
Q 035488 138 VVATGENA 145 (408)
Q Consensus 138 ViAtG~~~ 145 (408)
|+|+|..+
T Consensus 155 V~a~g~~~ 162 (336)
T 1yvv_A 155 IIATPAPQ 162 (336)
T ss_dssp EECSCHHH
T ss_pred EEcCCHHH
Confidence 99999643
No 103
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.13 E-value=9.5e-11 Score=97.81 Aligned_cols=101 Identities=19% Similarity=0.272 Sum_probs=68.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCC---CCC----CCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPF---PED----FPRVPH 91 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~ 91 (408)
+++|+|||||++|+.+|..|++.|.+|+|+|+.+..-..+ ..+..++.++. ..+ +.+.+.
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~~~~ 67 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV-------------SRVPNYPGLLDEPSGEELLRRLEAHAR 67 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC-------------SCCCCSTTCTTCCCHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc-------------hhhhccCCCcCCCCHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999987321100 00001111100 000 011222
Q ss_pred ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 92 QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 92 ~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
+.+++++++ +|++++..+ +.+.|++.+ .++.+|+||+|+|.
T Consensus 68 ~~gv~v~~~-~v~~i~~~~--~~~~v~~~~--------g~i~ad~vI~A~G~ 108 (180)
T 2ywl_A 68 RYGAEVRPG-VVKGVRDMG--GVFEVETEE--------GVEKAERLLLCTHK 108 (180)
T ss_dssp HTTCEEEEC-CCCEEEECS--SSEEEECSS--------CEEEEEEEEECCTT
T ss_pred HcCCEEEeC-EEEEEEEcC--CEEEEEECC--------CEEEECEEEECCCC
Confidence 668889998 999998766 556676654 37899999999994
No 104
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.11 E-value=1.1e-10 Score=110.29 Aligned_cols=123 Identities=14% Similarity=0.144 Sum_probs=75.1
Q ss_pred cccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC------------CCC----------CeeeecCCcc
Q 035488 17 IWVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR------------TYD----------RLKLHLPKQF 74 (408)
Q Consensus 17 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~------------~~~----------~~~~~~~~~~ 74 (408)
|..+||+|||||++|+++|..|++.|++|+|+|+.+.+++.+... ..+ ......+...
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCC
Confidence 345799999999999999999999999999999998665422110 000 0000000000
Q ss_pred --ccCCCCCCCCCCC-------------CCCCccCccccccceeEEEEEcCCCCcEE-EEEeecCCCCcceEEEEeCEEE
Q 035488 75 --CQLPNFPFPEDFP-------------RVPHQFDINPRFNETVQSAKYDETFGFWR-IKTISSSDSSFCEVEYICRWLV 138 (408)
Q Consensus 75 --~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~V~~i~~~~~~~~~~-V~~~~~~~~~~~~~~i~ad~vV 138 (408)
..+.......... +.+.+.+++++++++|+++...+ +.+. |++.+..+ ..++++|.||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~----~~~~~a~~vV 155 (397)
T 3cgv_A 82 RPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNE----IVDVRAKMVI 155 (397)
T ss_dssp SCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTE----EEEEEEEEEE
T ss_pred EEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEECCe----EEEEEcCEEE
Confidence 0000000000000 00014578889999999999876 5555 66643211 1689999999
Q ss_pred EeeCCCC
Q 035488 139 VATGENA 145 (408)
Q Consensus 139 iAtG~~~ 145 (408)
.|+|.++
T Consensus 156 ~A~G~~s 162 (397)
T 3cgv_A 156 AADGFES 162 (397)
T ss_dssp ECCCTTC
T ss_pred ECCCcch
Confidence 9999765
No 105
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.09 E-value=3.5e-11 Score=118.15 Aligned_cols=158 Identities=15% Similarity=0.178 Sum_probs=88.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC-CCCCccCCCC---------------CCCeee---e---cCCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN-CIASLWQNRT---------------YDRLKL---H---LPKQFCQ 76 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~-~~gg~w~~~~---------------~~~~~~---~---~~~~~~~ 76 (408)
.+||+|||||+||++||..|++.|.+|+|||++. .+|....... +.+... + .......
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~ 107 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILN 107 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhh
Confidence 4799999999999999999999999999999974 3331100000 000000 0 0000000
Q ss_pred CCCCCCCC------C-------CCCCCCc-cCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeC
Q 035488 77 LPNFPFPE------D-------FPRVPHQ-FDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATG 142 (408)
Q Consensus 77 ~~~~~~~~------~-------~~~~~~~-~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG 142 (408)
....+... + +.+.+.+ .++++ ++++|+.+..+++ ..+.|++.++ ..+.||.||+|||
T Consensus 108 ~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g-~V~GV~t~dG-------~~I~Ad~VVLATG 178 (651)
T 3ces_A 108 ASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVEND-RVVGAVTQMG-------LKFRAKAVVLTVG 178 (651)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSS-BEEEEEETTS-------EEEEEEEEEECCS
T ss_pred cccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCC-EEEEEEECCC-------CEEECCEEEEcCC
Confidence 00000000 0 0001113 47777 5689999986552 3445666543 5899999999999
Q ss_pred CCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEe
Q 035488 143 ENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVR 207 (408)
Q Consensus 143 ~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r 207 (408)
.++ ..+.++|...+ .+.+ +| |.+|+++|..|.+.|.+|+.+..
T Consensus 179 t~s--~~~~i~G~~~~----------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 179 TFL--DGKIHIGLDNY----------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp TTT--CCEEECC---------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred CCc--cCccccCcccC----------------CCCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 544 33345554321 1222 56 78999999999999999988853
No 106
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.09 E-value=2.5e-11 Score=105.78 Aligned_cols=120 Identities=14% Similarity=-0.019 Sum_probs=70.5
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCC--CC----CCCCCC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFP--ED----FPRVPH 91 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~ 91 (408)
..+||+|||||++|+++|..|++.|.+|+|||+.....|.|......... ....+..+.+...+ .. +.+.+.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~--~~~~~~~~~d~~g~~~~~~~~~l~~~~~ 79 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFP--PGSLLERAYDPKDERVWAFHARAKYLLE 79 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCC--TTCHHHHHCCTTCCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccc--hhhHHhhhccCCCCCHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999984333332211000000 00000000000000 00 001112
Q ss_pred cc-CccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCC
Q 035488 92 QF-DINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKI 148 (408)
Q Consensus 92 ~~-~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~ 148 (408)
+. +++++ +++|+++...++ +.+.|++.++ .+++||+||+|+|.++...
T Consensus 80 ~~~gv~i~-~~~v~~i~~~~~-~v~~v~~~~g-------~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 80 GLRPLHLF-QATATGLLLEGN-RVVGVRTWEG-------PPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp TCTTEEEE-ECCEEEEEEETT-EEEEEEETTS-------CCEECSEEEECCTTCSSCE
T ss_pred cCCCcEEE-EeEEEEEEEeCC-EEEEEEECCC-------CEEECCEEEECCCCChhhc
Confidence 44 77777 579999987652 3345665543 4799999999999755433
No 107
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.02 E-value=7.1e-10 Score=105.52 Aligned_cols=121 Identities=15% Similarity=0.116 Sum_probs=72.1
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCC----CC-ccCCC--------C-----------CCCeeeecCCccc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCI----AS-LWQNR--------T-----------YDRLKLHLPKQFC 75 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~----gg-~w~~~--------~-----------~~~~~~~~~~~~~ 75 (408)
+||+|||||++|+++|..|++.|++|+|+|+.+.. |. .+... . ..+..........
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 68999999999999999999999999999998632 21 11000 0 0000000000000
Q ss_pred cCCCCCCCCCCCC----------------CCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEE
Q 035488 76 QLPNFPFPEDFPR----------------VPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVV 139 (408)
Q Consensus 76 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vVi 139 (408)
.+........... .+.+.+++++++++|+++...+ +.+.+++...++.. .++++|.||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~~~v~v~~~~g~~---~~~~a~~vV~ 160 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFG--TDSVTTIEDINGNK---REIEARFIID 160 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEETTSCE---EEEEEEEEEE
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEEEcCCCCE---EEEEcCEEEE
Confidence 0000000000000 0114588999999999999876 45545555443322 4799999999
Q ss_pred eeCCCC
Q 035488 140 ATGENA 145 (408)
Q Consensus 140 AtG~~~ 145 (408)
|+|.++
T Consensus 161 A~G~~s 166 (421)
T 3nix_A 161 ASGYGR 166 (421)
T ss_dssp CCGGGC
T ss_pred CCCCch
Confidence 999654
No 108
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.02 E-value=2.7e-11 Score=114.94 Aligned_cols=119 Identities=18% Similarity=0.223 Sum_probs=72.7
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC------cc-------------CC-----CCCCCeeeecCC-
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIAS------LW-------------QN-----RTYDRLKLHLPK- 72 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg------~w-------------~~-----~~~~~~~~~~~~- 72 (408)
..+||+|||||++|+++|..|+++|++|+|||+.+.+.. .+ .. ............
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 368999999999999999999999999999999875531 00 00 001111111000
Q ss_pred --ccccCCCCCCCC--CCCCC-CC------------ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeC
Q 035488 73 --QFCQLPNFPFPE--DFPRV-PH------------QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICR 135 (408)
Q Consensus 73 --~~~~~~~~~~~~--~~~~~-~~------------~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad 135 (408)
....++...... ....+ .. .. ++++++++|++++..+ +.++|++.++ .++++|
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~~i~~~~~v~~i~~~~--~~v~v~~~~g-------~~~~a~ 171 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR-DSVQFGKRVTRCEEDA--DGVTVWFTDG-------SSASGD 171 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG-GGEEESCCEEEEEEET--TEEEEEETTS-------CEEEES
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc-CEEEECCEEEEEEecC--CcEEEEEcCC-------CEEeeC
Confidence 000000000000 00000 00 11 6789999999999887 6677777665 589999
Q ss_pred EEEEeeCCCCC
Q 035488 136 WLVVATGENAE 146 (408)
Q Consensus 136 ~vViAtG~~~~ 146 (408)
.||.|+|.++.
T Consensus 172 ~vV~AdG~~S~ 182 (407)
T 3rp8_A 172 LLIAADGSHSA 182 (407)
T ss_dssp EEEECCCTTCS
T ss_pred EEEECCCcChH
Confidence 99999997654
No 109
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.01 E-value=8.4e-10 Score=107.19 Aligned_cols=121 Identities=17% Similarity=0.191 Sum_probs=75.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCC--------------CCCCCeeeecCCccccCCC--CC-
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQN--------------RTYDRLKLHLPKQFCQLPN--FP- 81 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~--------------~~~~~~~~~~~~~~~~~~~--~~- 81 (408)
.+||+||||||+|+++|..|+++|++|+|||+.+.+...-+. ...+.+....+.....+.. ..
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 90 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDF 90 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceeccc
Confidence 569999999999999999999999999999998765321000 0000000000000000000 00
Q ss_pred --CCCCCCC---------------CCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCC
Q 035488 82 --FPEDFPR---------------VPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGEN 144 (408)
Q Consensus 82 --~~~~~~~---------------~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~ 144 (408)
.....+. .+.+.+++++++++|++++.++ +.++|++.++++ + .++++|+||.|+|.+
T Consensus 91 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~~~~g-~---~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 91 GVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDG--AGVTVEVRGPEG-K---HTLRAAYLVGCDGGR 164 (500)
T ss_dssp GGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEET--TEEEEEEEETTE-E---EEEEESEEEECCCTT
T ss_pred ccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcC--CeEEEEEEcCCC-C---EEEEeCEEEECCCcc
Confidence 0000000 0015578899999999999877 567788776533 2 589999999999986
Q ss_pred C
Q 035488 145 A 145 (408)
Q Consensus 145 ~ 145 (408)
+
T Consensus 165 S 165 (500)
T 2qa1_A 165 S 165 (500)
T ss_dssp C
T ss_pred h
Confidence 6
No 110
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.00 E-value=7.4e-10 Score=109.11 Aligned_cols=119 Identities=18% Similarity=0.200 Sum_probs=72.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC-------------------ccCCCCCCCeeeecCCc-cccCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIAS-------------------LWQNRTYDRLKLHLPKQ-FCQLP 78 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg-------------------~w~~~~~~~~~~~~~~~-~~~~~ 78 (408)
.+||+|||||++|+++|..|++.|++|+|||+.+.+.. .|....-..... ... +....
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~--~~~~~~~~~ 126 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVA--KGLPFAGIF 126 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBC--SBCCBTTBC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCccc--CCceeCCcc
Confidence 47999999999999999999999999999999875541 111000000000 000 00000
Q ss_pred --CCC---CCCCCCC--CCC-------------ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEE
Q 035488 79 --NFP---FPEDFPR--VPH-------------QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLV 138 (408)
Q Consensus 79 --~~~---~~~~~~~--~~~-------------~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vV 138 (408)
... .....+. ... +.+++++++++|++++.++ +.++|++.+.++ +.++++|+||
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~--~~v~v~~~~~~G----~~~~~a~~vV 200 (570)
T 3fmw_A 127 TQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDA--EAVEVTVAGPSG----PYPVRARYGV 200 (570)
T ss_dssp TTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCS--SCEEEEEEETTE----EEEEEESEEE
T ss_pred cccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CeEEEEEEeCCC----cEEEEeCEEE
Confidence 000 0000000 011 4578899999999998776 566677743221 1479999999
Q ss_pred EeeCCCC
Q 035488 139 VATGENA 145 (408)
Q Consensus 139 iAtG~~~ 145 (408)
.|+|.++
T Consensus 201 ~ADG~~S 207 (570)
T 3fmw_A 201 GCDGGRS 207 (570)
T ss_dssp ECSCSSC
T ss_pred EcCCCCc
Confidence 9999765
No 111
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.99 E-value=6.6e-10 Score=108.26 Aligned_cols=38 Identities=32% Similarity=0.605 Sum_probs=32.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIAS 56 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg 56 (408)
||+|+|||||++||+||..|++.|++|+|+|+++.+||
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG 38 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGG 38 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-----
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCC
Confidence 57999999999999999999999999999999999988
No 112
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.98 E-value=2.1e-10 Score=112.64 Aligned_cols=121 Identities=17% Similarity=0.163 Sum_probs=75.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC------------------------CCCCe------ee
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR------------------------TYDRL------KL 68 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~------------------------~~~~~------~~ 68 (408)
.+||+|||||++|+++|..|+++|++|+|||+.+..+..-+.. ..... ..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 84 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLA 84 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEE
Confidence 3589999999999999999999999999999987553110000 00000 00
Q ss_pred ecC--Cccc----cC-------CC-CCCCCCCC----------CCCCccCccccccceeEEEEEcCCCC----cEEEEEe
Q 035488 69 HLP--KQFC----QL-------PN-FPFPEDFP----------RVPHQFDINPRFNETVQSAKYDETFG----FWRIKTI 120 (408)
Q Consensus 69 ~~~--~~~~----~~-------~~-~~~~~~~~----------~~~~~~~~~~~~~~~V~~i~~~~~~~----~~~V~~~ 120 (408)
... ..+. .+ .. .+...... +.+.+.+++++++++|++++.++ + .+++++.
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~~~~~v~v~~~ 162 (535)
T 3ihg_A 85 ESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHD--DDAGAGVTARLA 162 (535)
T ss_dssp SSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEEC--GGGCSEEEEEEE
T ss_pred eccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECC--CCccccEEEEEE
Confidence 000 0000 00 00 00000000 00115588999999999999876 4 6777777
Q ss_pred ecCCCCcceEEEEeCEEEEeeCCCC
Q 035488 121 SSSDSSFCEVEYICRWLVVATGENA 145 (408)
Q Consensus 121 ~~~~~~~~~~~i~ad~vViAtG~~~ 145 (408)
++++ + .+++||+||.|+|.++
T Consensus 163 ~~~~-~---~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 163 GPDG-E---YDLRAGYLVGADGNRS 183 (535)
T ss_dssp ETTE-E---EEEEEEEEEECCCTTC
T ss_pred cCCC-e---EEEEeCEEEECCCCcc
Confidence 6543 2 6899999999999866
No 113
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.97 E-value=3.8e-10 Score=106.57 Aligned_cols=118 Identities=15% Similarity=0.150 Sum_probs=71.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCC-CC----c--cCC--------CCCCCeeeecCCc---cccC-CC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCI-AS----L--WQN--------RTYDRLKLHLPKQ---FCQL-PN 79 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~-gg----~--w~~--------~~~~~~~~~~~~~---~~~~-~~ 79 (408)
.+||+|||||++|+++|..|++.|++|+|+|+.+.. .+ . +.. .... .....+.. +... ..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~g 83 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-DSISVPSSSMEYVDALTG 83 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-GGTCBCCCEEEEEETTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-ccccccccceEEEecCCC
Confidence 468999999999999999999999999999998753 11 0 000 0000 00000000 0000 00
Q ss_pred C-----CCCCCCCC------CCC--ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCC
Q 035488 80 F-----PFPEDFPR------VPH--QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAE 146 (408)
Q Consensus 80 ~-----~~~~~~~~------~~~--~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~ 146 (408)
. ..+..... .+. ..+++++++++|++++..+ +.++|++.++ .++++|+||.|+|.++.
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~--~~v~v~~~~g-------~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 84 ERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDS--ETVQMRFSDG-------TKAEANWVIGADGGASV 154 (397)
T ss_dssp CEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECS--SCEEEEETTS-------CEEEESEEEECCCTTCH
T ss_pred CccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecC--CEEEEEECCC-------CEEECCEEEECCCcchh
Confidence 0 00000000 000 1267889999999999876 5677877664 47999999999997653
No 114
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.97 E-value=1.4e-09 Score=105.56 Aligned_cols=121 Identities=16% Similarity=0.141 Sum_probs=75.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCC--------------CCCCCeee--ecCCc-ccc--CCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQN--------------RTYDRLKL--HLPKQ-FCQ--LPN 79 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~--------------~~~~~~~~--~~~~~-~~~--~~~ 79 (408)
.+||+||||||+|+++|..|+++|++|+|||+.+.+....+. ...+.+.. ..... +.. +..
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 468999999999999999999999999999998755321100 00000000 00000 000 000
Q ss_pred CCCCCCCCC---------------CCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCC
Q 035488 80 FPFPEDFPR---------------VPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGEN 144 (408)
Q Consensus 80 ~~~~~~~~~---------------~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~ 144 (408)
.......+. .+.+.+++++++++|++++.++ +.++|++.++++ + .++++|+||.|+|.+
T Consensus 92 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~~~~g-~---~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 92 GVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEG--DHVVVEVEGPDG-P---RSLTTRYVVGCDGGR 165 (499)
T ss_dssp GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECS--SCEEEEEECSSC-E---EEEEEEEEEECCCTT
T ss_pred ccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEEEcCCC-c---EEEEeCEEEEccCcc
Confidence 000000000 0015578899999999999876 567787776543 2 589999999999986
Q ss_pred C
Q 035488 145 A 145 (408)
Q Consensus 145 ~ 145 (408)
+
T Consensus 166 S 166 (499)
T 2qa2_A 166 S 166 (499)
T ss_dssp C
T ss_pred c
Confidence 6
No 115
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.96 E-value=1.8e-09 Score=105.06 Aligned_cols=119 Identities=24% Similarity=0.383 Sum_probs=73.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC-------CccCCCCCC----------C--------eeeecCCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA-------SLWQNRTYD----------R--------LKLHLPKQ 73 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g-------g~w~~~~~~----------~--------~~~~~~~~ 73 (408)
.+||+|||||++|+++|..|++.|++|+|||+.+.++ +.|...... + +.......
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4799999999999999999999999999999987542 122210000 0 00000000
Q ss_pred -c-----------ccCCCCCCCCCCCC---------------CCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCC
Q 035488 74 -F-----------CQLPNFPFPEDFPR---------------VPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSS 126 (408)
Q Consensus 74 -~-----------~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~ 126 (408)
. ...+........+. .+.+.+++++++++|+++...++ +.+.|++.++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~-~v~gV~l~~G---- 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDG-QITGVTLSNG---- 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSS-BEEEEEETTS----
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCC-EEEEEEECCC----
Confidence 0 00000000000000 11156889999999999987652 3455777654
Q ss_pred cceEEEEeCEEEEeeCCCC
Q 035488 127 FCEVEYICRWLVVATGENA 145 (408)
Q Consensus 127 ~~~~~i~ad~vViAtG~~~ 145 (408)
.++.||.||+|+|.++
T Consensus 262 ---~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 ---EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp ---CEEECSCEEECCCTTC
T ss_pred ---CEEECCEEEECCCCCh
Confidence 5799999999999755
No 116
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.96 E-value=2.3e-10 Score=111.04 Aligned_cols=127 Identities=15% Similarity=0.106 Sum_probs=75.5
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCee-eecCCccc-cCCCCCCCC-------C---
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLK-LHLPKQFC-QLPNFPFPE-------D--- 85 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~-~~~~~~~~-~~~~~~~~~-------~--- 85 (408)
..+||+|||||++|+++|..|++.|++|+|||+.+.+++......++... ........ ....+.... .
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~ 170 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQL 170 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHH
Confidence 36799999999999999999999999999999998776421110000000 00000000 000000000 0
Q ss_pred -CCCCCCccCccccccceeEEEEEcC-CCCcEEEEEeec-CCCCcceEEEEeCEEEEeeCCCCCC
Q 035488 86 -FPRVPHQFDINPRFNETVQSAKYDE-TFGFWRIKTISS-SDSSFCEVEYICRWLVVATGENAEK 147 (408)
Q Consensus 86 -~~~~~~~~~~~~~~~~~V~~i~~~~-~~~~~~V~~~~~-~~~~~~~~~i~ad~vViAtG~~~~~ 147 (408)
+.+.+.+.+++++++++|+++.... +.+.+.|++.+. ++.. .++++|+||+|+|..+.+
T Consensus 171 ~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~---~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 171 LLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQL---ASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHH---HTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCE---EEEEcCEEEECCCCCccc
Confidence 0011115688999999999998642 124577877432 2111 368999999999965543
No 117
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.96 E-value=5.4e-10 Score=107.15 Aligned_cols=120 Identities=19% Similarity=0.340 Sum_probs=74.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCC-----CCCC------CeeeecCC--ccc-----cC---
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQN-----RTYD------RLKLHLPK--QFC-----QL--- 77 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~-----~~~~------~~~~~~~~--~~~-----~~--- 77 (408)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.+++.... ..+. .+...... .+. ..
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 479999999999999999999999999999998877642100 0000 00000000 000 00
Q ss_pred --------CCCCCC-----CCCC-------------CCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEE
Q 035488 78 --------PNFPFP-----EDFP-------------RVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVE 131 (408)
Q Consensus 78 --------~~~~~~-----~~~~-------------~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~ 131 (408)
...++. ..++ +.+.+.+++++++++|+++...++ +.+.|++.++ ..
T Consensus 106 ~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~-~v~~V~~~~G-------~~ 177 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENG-QTKAVILQTG-------EV 177 (447)
T ss_dssp HHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETT-EEEEEEETTC-------CE
T ss_pred HHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCC-cEEEEEECCC-------CE
Confidence 000000 0000 011156888999999999987651 3377777653 36
Q ss_pred EEeCEEEEeeCCCCC
Q 035488 132 YICRWLVVATGENAE 146 (408)
Q Consensus 132 i~ad~vViAtG~~~~ 146 (408)
+++|.||+|+|.++.
T Consensus 178 i~Ad~VVlAtGg~s~ 192 (447)
T 2i0z_A 178 LETNHVVIAVGGKSV 192 (447)
T ss_dssp EECSCEEECCCCSSS
T ss_pred EECCEEEECCCCCcC
Confidence 999999999997664
No 118
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.95 E-value=1.4e-09 Score=97.63 Aligned_cols=121 Identities=14% Similarity=0.138 Sum_probs=72.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHc-CCCEEEEecCCCCCC-ccCCC-CCCCeeeecCC-ccc---cCCCCCCC--------
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ-GVPFIILERANCIAS-LWQNR-TYDRLKLHLPK-QFC---QLPNFPFP-------- 83 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~~~~~gg-~w~~~-~~~~~~~~~~~-~~~---~~~~~~~~-------- 83 (408)
.+||+|||||++|+++|..|+++ |.+|+|||+.+.+++ .|... .+..+....+. .+. ..++....
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 56999999999999999999998 999999999988765 44321 11111111000 000 00000000
Q ss_pred CC----CCCCC-CccCccccccceeEEEEEcCCCCcEEEEEeec-------C---CCCcceEEEEeCEEEEeeCC
Q 035488 84 ED----FPRVP-HQFDINPRFNETVQSAKYDETFGFWRIKTISS-------S---DSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 84 ~~----~~~~~-~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~-------~---~~~~~~~~i~ad~vViAtG~ 143 (408)
.. +.+.+ ++.+++++++++|+++..+.. +...|++... + +.. ..+.||.||+|+|.
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~-~v~gv~~~~~~~~~~~~~g~~g~~---~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGN-RVGGVVTNWALVAQNHHTQSCMDP---NVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEETT-EEEEEEEEEHHHHTCTTTSSCCCC---EEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCC-eEEEEEEeccccccccCccccCce---EEEECCEEEECCCC
Confidence 00 00001 135889999999999987652 2233555320 1 112 57999999999994
No 119
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.93 E-value=5.1e-09 Score=99.07 Aligned_cols=34 Identities=35% Similarity=0.586 Sum_probs=32.0
Q ss_pred CcEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQGVPFIILERANCI 54 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~ 54 (408)
+|+||||||+|+++|..|+++|++|+|+||.+.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 5999999999999999999999999999998754
No 120
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.93 E-value=2.8e-09 Score=104.38 Aligned_cols=158 Identities=15% Similarity=0.075 Sum_probs=93.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC-CCCCccCCCC---------------CCCeee---e---cCCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN-CIASLWQNRT---------------YDRLKL---H---LPKQFCQ 76 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~-~~gg~w~~~~---------------~~~~~~---~---~~~~~~~ 76 (408)
.+||+|||||+||++||..|++.|.+|+|||++. .+|....... +.+... + .......
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 4799999999999999999999999999999974 3332100000 000000 0 0000000
Q ss_pred CCCCCCCC------C-------CCCCCCc-cCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeC
Q 035488 77 LPNFPFPE------D-------FPRVPHQ-FDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATG 142 (408)
Q Consensus 77 ~~~~~~~~------~-------~~~~~~~-~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG 142 (408)
....+... + +.+.+.+ .++++ ++++|+.+..+++ ..+.|.+.++ ..+.||.||+|||
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g-~V~GV~t~dG-------~~i~AdaVVLATG 177 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNN-QVVGVRTNLG-------VEYKTKAVVVTTG 177 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSS-BEEEEEETTS-------CEEECSEEEECCT
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCC-EEEEEEECCC-------cEEEeCEEEEccC
Confidence 00000000 0 0001113 37777 5689999876652 3445666553 5899999999999
Q ss_pred CCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEe
Q 035488 143 ENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVR 207 (408)
Q Consensus 143 ~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r 207 (408)
.+ +..+.++|...+. .++ + |+.++++++..|.+.|.++..+.+
T Consensus 178 ~~--s~~~~~~G~~~~~---------------~Gr----~-G~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 178 TF--LNGVIYIGDKMIP---------------GGR----L-GEPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp TC--BTCEEEETTEEEE---------------CSB----T-TBCCBCTHHHHHHHTTCCCEEEEE
T ss_pred CC--ccCceeccceecC---------------CCC----C-CchhHHHHHHHHHhcCCceEEecC
Confidence 54 3334455543211 111 2 357889999999999999887765
No 121
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.91 E-value=6.6e-10 Score=104.98 Aligned_cols=119 Identities=15% Similarity=0.090 Sum_probs=71.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC------c-------------cCC-----CCCCCeeeecCCc-
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIAS------L-------------WQN-----RTYDRLKLHLPKQ- 73 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg------~-------------w~~-----~~~~~~~~~~~~~- 73 (408)
.+||+|||||++|+++|..|++.|++|+|||+.+.+.. . |.. .............
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 35899999999999999999999999999999865411 0 000 0000000000000
Q ss_pred -cccCCCCCCCC-CC-------------CCCCCcc-CccccccceeEEEEEcCCCCcE--EEEEeecCCCCcceEEEEeC
Q 035488 74 -FCQLPNFPFPE-DF-------------PRVPHQF-DINPRFNETVQSAKYDETFGFW--RIKTISSSDSSFCEVEYICR 135 (408)
Q Consensus 74 -~~~~~~~~~~~-~~-------------~~~~~~~-~~~~~~~~~V~~i~~~~~~~~~--~V~~~~~~~~~~~~~~i~ad 135 (408)
...++...... .+ .+.+.+. +++++++++|++++.++ +.+ .|++.++ .++++|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~g~v~~~~g-------~~~~ad 156 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDE--RHAIDQVRLNDG-------RVLRPR 156 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECT--TSCEEEEEETTS-------CEEEEE
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC--CceEEEEEECCC-------CEEECC
Confidence 00000000000 00 0001144 78899999999999876 455 6777654 479999
Q ss_pred EEEEeeCCCCC
Q 035488 136 WLVVATGENAE 146 (408)
Q Consensus 136 ~vViAtG~~~~ 146 (408)
.||+|+|.++.
T Consensus 157 ~vV~AdG~~s~ 167 (399)
T 2x3n_A 157 VVVGADGIASY 167 (399)
T ss_dssp EEEECCCTTCH
T ss_pred EEEECCCCChH
Confidence 99999997653
No 122
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.91 E-value=3.6e-09 Score=104.49 Aligned_cols=124 Identities=15% Similarity=0.158 Sum_probs=74.0
Q ss_pred cccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCc------------------cCC---CCCC---CeeeecCC
Q 035488 17 IWVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASL------------------WQN---RTYD---RLKLHLPK 72 (408)
Q Consensus 17 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~------------------w~~---~~~~---~~~~~~~~ 72 (408)
|..+||+|||||++|+++|..|++.|++|+|||+.+..... |.. ..+. ........
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 100 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQ 100 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecC
Confidence 44689999999999999999999999999999998543210 000 0000 00000000
Q ss_pred c----cccCCCCCC-CCCCC---------------CCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEE
Q 035488 73 Q----FCQLPNFPF-PEDFP---------------RVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEY 132 (408)
Q Consensus 73 ~----~~~~~~~~~-~~~~~---------------~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i 132 (408)
. ...+..... +.... +.+.+.+++++++++|+++...+. +.+.|++.++ +. ..++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g-~~~~V~~~~~-G~---~~~i 175 (591)
T 3i3l_A 101 DQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDP-DRVVLTVRRG-GE---SVTV 175 (591)
T ss_dssp SCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCST-TCEEEEEEET-TE---EEEE
T ss_pred CCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CEEEEEEecC-Cc---eEEE
Confidence 0 000000000 00000 001156888999999999987532 5677887742 11 1579
Q ss_pred EeCEEEEeeCCCC
Q 035488 133 ICRWLVVATGENA 145 (408)
Q Consensus 133 ~ad~vViAtG~~~ 145 (408)
++|.||.|+|.++
T Consensus 176 ~AdlVV~AdG~~S 188 (591)
T 3i3l_A 176 ESDFVIDAGGSGG 188 (591)
T ss_dssp EESEEEECCGGGC
T ss_pred EcCEEEECCCCcc
Confidence 9999999999754
No 123
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.91 E-value=3.8e-09 Score=99.75 Aligned_cols=119 Identities=16% Similarity=0.178 Sum_probs=72.2
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC-----CccCCCCCCCeee-e------------cCC--ccccC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA-----SLWQNRTYDRLKL-H------------LPK--QFCQL 77 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g-----g~w~~~~~~~~~~-~------------~~~--~~~~~ 77 (408)
..+||+|||||++|+++|..|++.|++|+|||+.+.++ +.|.......... . .+. .+...
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 35799999999999999999999999999999987543 2221100000000 0 000 00000
Q ss_pred CCC---CC--C----CCCCCCCC-----------ccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEE
Q 035488 78 PNF---PF--P----EDFPRVPH-----------QFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWL 137 (408)
Q Consensus 78 ~~~---~~--~----~~~~~~~~-----------~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~v 137 (408)
... .. + .... ... ..+..++++++|++++..+ +.++|++.++ .++++|+|
T Consensus 105 ~g~~~~~~~~~~~~~~~~~-~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~--~~v~v~~~~g-------~~~~ad~v 174 (398)
T 2xdo_A 105 KGNILSTKNVKPENRFDNP-EINRNDLRAILLNSLENDTVIWDRKLVMLEPGK--KKWTLTFENK-------PSETADLV 174 (398)
T ss_dssp SSEEEEECCCGGGTTSSCC-EECHHHHHHHHHHTSCTTSEEESCCEEEEEECS--SSEEEEETTS-------CCEEESEE
T ss_pred CCCchhhccccccCCCCCc-eECHHHHHHHHHhhcCCCEEEECCEEEEEEECC--CEEEEEECCC-------cEEecCEE
Confidence 000 00 0 0000 000 1124688899999999876 5677877664 47899999
Q ss_pred EEeeCCCCC
Q 035488 138 VVATGENAE 146 (408)
Q Consensus 138 ViAtG~~~~ 146 (408)
|.|+|.++.
T Consensus 175 V~AdG~~S~ 183 (398)
T 2xdo_A 175 ILANGGMSK 183 (398)
T ss_dssp EECSCTTCS
T ss_pred EECCCcchh
Confidence 999997664
No 124
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.89 E-value=2.4e-09 Score=100.26 Aligned_cols=37 Identities=22% Similarity=0.254 Sum_probs=33.6
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
..+||+|||||++|+++|++|+ +|++|+|+|+.+.++
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g 44 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPG 44 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTT
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCcc
Confidence 3679999999999999999999 699999999987665
No 125
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.87 E-value=2.9e-10 Score=106.64 Aligned_cols=117 Identities=15% Similarity=0.159 Sum_probs=70.3
Q ss_pred cccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCC------------------------CCCCCeeeecCC
Q 035488 17 IWVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQN------------------------RTYDRLKLHLPK 72 (408)
Q Consensus 17 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~------------------------~~~~~~~~~~~~ 72 (408)
|..+||+|||||++|+++|..|++.|++|+|||+.+.+++.-.. ............
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 88 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHN 88 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCC
Confidence 33579999999999999999999999999999998766421000 000000000000
Q ss_pred -ccccCCCCCCCC------C----CCCCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEee
Q 035488 73 -QFCQLPNFPFPE------D----FPRVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVAT 141 (408)
Q Consensus 73 -~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAt 141 (408)
.+...+....+. . +.+.+.+.+++++++++|++++. + + .|++.++ .++++|+||+|+
T Consensus 89 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~--~--~v~~~~g-------~~~~ad~vV~Ad 156 (379)
T 3alj_A 89 KSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V--G--RLTLQTG-------EVLEADLIVGAD 156 (379)
T ss_dssp EEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T--T--EEEETTS-------CEEECSEEEECC
T ss_pred ceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C--C--EEEECCC-------CEEEcCEEEECC
Confidence 000000000000 0 00011145788999999999986 3 4 5777654 479999999999
Q ss_pred CCCC
Q 035488 142 GENA 145 (408)
Q Consensus 142 G~~~ 145 (408)
|.++
T Consensus 157 G~~s 160 (379)
T 3alj_A 157 GVGS 160 (379)
T ss_dssp CTTC
T ss_pred CccH
Confidence 9654
No 126
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.86 E-value=1.6e-08 Score=99.92 Aligned_cols=39 Identities=26% Similarity=0.480 Sum_probs=36.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASL 57 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~ 57 (408)
.+||+|||||++|+++|..|++.|++|+||||.+.++|.
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~ 164 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGN 164 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 479999999999999999999999999999999988764
No 127
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.86 E-value=9.6e-09 Score=95.64 Aligned_cols=37 Identities=32% Similarity=0.468 Sum_probs=33.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
.+||+|||||++|+++|..|+++|++|+|+|+.+.++
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIG 40 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 3589999999999999999999999999999986554
No 128
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.85 E-value=8.3e-09 Score=100.65 Aligned_cols=34 Identities=29% Similarity=0.554 Sum_probs=32.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 4699999999999999999999999999999987
No 129
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.85 E-value=4e-09 Score=98.53 Aligned_cols=35 Identities=17% Similarity=0.254 Sum_probs=32.9
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCI 54 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~ 54 (408)
+||+|||||++|+++|.+|+++|++|+|||+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 58999999999999999999999999999998654
No 130
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.85 E-value=2.8e-09 Score=95.12 Aligned_cols=41 Identities=20% Similarity=0.328 Sum_probs=38.2
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQN 60 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~ 60 (408)
+||+||||||||++||..|+++|++|+||||.+.+||.+..
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~ 43 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS 43 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccc
Confidence 68999999999999999999999999999999999986653
No 131
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.85 E-value=1.7e-08 Score=99.85 Aligned_cols=38 Identities=39% Similarity=0.602 Sum_probs=35.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHc------CCCEEEEecCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ------GVPFIILERANCIAS 56 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~------g~~v~lie~~~~~gg 56 (408)
.+||+|||||++|+++|+.|++. |++|+||||.+.+++
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~ 78 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGA 78 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCC
Confidence 48999999999999999999999 999999999987765
No 132
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.85 E-value=4.3e-09 Score=106.25 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=33.6
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
+||+|||||++|+++|..|+++|++|+|||+.+.++
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g 308 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEAPA 308 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 799999999999999999999999999999976554
No 133
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.83 E-value=9.1e-09 Score=101.25 Aligned_cols=39 Identities=15% Similarity=0.270 Sum_probs=35.3
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIAS 56 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg 56 (408)
..+||+|||||++|+++|..|+++|++|+|+|+.+..+|
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~G 55 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASG 55 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCC
Confidence 358999999999999999999999999999999965554
No 134
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.82 E-value=1.6e-08 Score=96.76 Aligned_cols=38 Identities=26% Similarity=0.358 Sum_probs=34.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV-PFIILERANCIAS 56 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~~~gg 56 (408)
.+||+|||||++|+++|.+|+++|+ +|+|+|+.+..++
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~ 44 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSA 44 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCC
Confidence 4699999999999999999999999 9999999986654
No 135
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.81 E-value=2e-08 Score=99.11 Aligned_cols=38 Identities=24% Similarity=0.476 Sum_probs=35.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIAS 56 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg 56 (408)
.+||+|||||++|+++|..|++.|++|+||||.+.++|
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg 158 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGG 158 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 46999999999999999999999999999999988776
No 136
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.81 E-value=1.2e-08 Score=102.99 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=34.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
.+||+|||||++|+++|..|+++|++|+|||+.+.++
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g 300 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPA 300 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccc
Confidence 4799999999999999999999999999999986554
No 137
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.81 E-value=1.6e-09 Score=106.35 Aligned_cols=158 Identities=16% Similarity=0.204 Sum_probs=89.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC-CCCCccCCCCC---------------CCeee---e---cCCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN-CIASLWQNRTY---------------DRLKL---H---LPKQFCQ 76 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~-~~gg~w~~~~~---------------~~~~~---~---~~~~~~~ 76 (408)
.+||+|||||+||++||..|++.|.+|+|+|+.. .+|+.+..... .+... . .......
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~ 100 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLN 100 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhcc
Confidence 5799999999999999999999999999999975 34433211000 00000 0 0000000
Q ss_pred CCCCCCCC------C-------CCCCCCc-cCccccccceeEEEEEcCCCCcE-EEEEeecCCCCcceEEEEeCEEEEee
Q 035488 77 LPNFPFPE------D-------FPRVPHQ-FDINPRFNETVQSAKYDETFGFW-RIKTISSSDSSFCEVEYICRWLVVAT 141 (408)
Q Consensus 77 ~~~~~~~~------~-------~~~~~~~-~~~~~~~~~~V~~i~~~~~~~~~-~V~~~~~~~~~~~~~~i~ad~vViAt 141 (408)
....+... + +.+.+.+ .++++ ++.+|+.+..++ +.+ .|.+.++ ..+.||.||+||
T Consensus 101 ~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I-~~~~V~~L~~d~--g~V~GV~t~~G-------~~i~Ad~VVLAT 170 (641)
T 3cp8_A 101 RSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDL-LQDTVIGVSANS--GKFSSVTVRSG-------RAIQAKAAILAC 170 (641)
T ss_dssp SSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEEET--TEEEEEEETTS-------CEEEEEEEEECC
T ss_pred cccCccccchhhhcCHHHHHHHHHHHHHhCCCCEE-EeeEEEEEEecC--CEEEEEEECCC-------cEEEeCEEEECc
Confidence 00000000 0 0001113 36676 456888887655 433 2555443 489999999999
Q ss_pred CCCCCCCCCCCCCCCCcceeeeeccCCCCCCCCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEe
Q 035488 142 GENAEKIEPEFEGLQHFEGNVMHAGDYKSGASYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVR 207 (408)
Q Consensus 142 G~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r 207 (408)
|.+.... ..+|...+ .+.++ + |+.++++++..|.+.|.+|..+..
T Consensus 171 G~~s~~~--i~~G~~~~----------------~~g~~--v-G~~~a~~la~~L~~~G~kv~~l~t 215 (641)
T 3cp8_A 171 GTFLNGL--IHIGMDHF----------------PGGRS--T-AEPPVEGLTESLASLGFSFGRLKT 215 (641)
T ss_dssp TTCBTCE--EEETTEEE----------------ECSSS--T-TSCCBCSHHHHHHHTTCCEEEEEE
T ss_pred CCCCCcc--ceeeeeee----------------ccccc--c-CCchhhhhHHHHHhCCceEEeecC
Confidence 9644322 22222211 00111 1 367889999999999999876654
No 138
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.80 E-value=3.8e-08 Score=96.77 Aligned_cols=37 Identities=27% Similarity=0.531 Sum_probs=34.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
.+||+||||||+|+++|..|++.|++|+|||+.+.++
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~ 62 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTI 62 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 4689999999999999999999999999999987654
No 139
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.80 E-value=7e-09 Score=94.27 Aligned_cols=41 Identities=32% Similarity=0.435 Sum_probs=36.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCC-ccC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCIAS-LWQ 59 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~gg-~w~ 59 (408)
.+||+|||||++|+++|..|+++ |++|+|||+.+.++| .|.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~ 122 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWL 122 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcccc
Confidence 57999999999999999999998 999999999987764 553
No 140
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.80 E-value=3e-09 Score=100.28 Aligned_cols=122 Identities=16% Similarity=0.181 Sum_probs=71.6
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCC------C-C-ccCC--------CC----------CCCeeeecCCc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCI------A-S-LWQN--------RT----------YDRLKLHLPKQ 73 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~------g-g-~w~~--------~~----------~~~~~~~~~~~ 73 (408)
+||+|||||++|+++|..|++.|++|+|+|+.+.. + | ++.. .. ...........
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 58999999999999999999999999999998631 1 1 1110 00 00000000000
Q ss_pred cccCCC-----CC----CCC-C----CCCCCCccCccccccceeEEEEEcCCCCcEEEEE-eecCCCCcceEEEEeCEEE
Q 035488 74 FCQLPN-----FP----FPE-D----FPRVPHQFDINPRFNETVQSAKYDETFGFWRIKT-ISSSDSSFCEVEYICRWLV 138 (408)
Q Consensus 74 ~~~~~~-----~~----~~~-~----~~~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~-~~~~~~~~~~~~i~ad~vV 138 (408)
...... .. +.. . +.+.+.+.+++++++++|+++...+. +.+.|++ .++ .. .++++|.||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~-~~~~v~~~~~g--~~---~~~~a~~vV 156 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQG-ERPYVTFERDG--ER---LRLDCDYIA 156 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTS-SSCEEEEEETT--EE---EEEECSEEE
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecC-CceEEEEecCC--cE---EEEEeCEEE
Confidence 000000 00 000 0 00001145788999999999987532 3456776 432 11 379999999
Q ss_pred EeeCCCCCC
Q 035488 139 VATGENAEK 147 (408)
Q Consensus 139 iAtG~~~~~ 147 (408)
.|+|.++..
T Consensus 157 ~AdG~~S~v 165 (394)
T 1k0i_A 157 GCDGFHGIS 165 (394)
T ss_dssp ECCCTTCST
T ss_pred ECCCCCcHH
Confidence 999976653
No 141
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.80 E-value=4.3e-09 Score=101.11 Aligned_cols=122 Identities=12% Similarity=0.168 Sum_probs=71.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCC--CCccCCC-----------CCCC----eeeecC-CccccCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCI--ASLWQNR-----------TYDR----LKLHLP-KQFCQLPNF 80 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~--gg~w~~~-----------~~~~----~~~~~~-~~~~~~~~~ 80 (408)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+ +..+... .... ...... ..+.. +..
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~-~~~ 84 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYS-PDM 84 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEEC-TTS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEEC-CCC
Confidence 369999999999999999999999999999998753 2221100 0000 000000 00000 000
Q ss_pred CCCCCCC----------------CCCCccCccccccceeEEEEEcCCCCcEE-EEEeec-CCCCcceEEEEeCEEEEeeC
Q 035488 81 PFPEDFP----------------RVPHQFDINPRFNETVQSAKYDETFGFWR-IKTISS-SDSSFCEVEYICRWLVVATG 142 (408)
Q Consensus 81 ~~~~~~~----------------~~~~~~~~~~~~~~~V~~i~~~~~~~~~~-V~~~~~-~~~~~~~~~i~ad~vViAtG 142 (408)
.....+. +.+.+.+++++++++|+++..++ +.+. |++.+. ++.. .+++||.||.|+|
T Consensus 85 ~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~---~~~~ad~VV~AdG 159 (453)
T 3atr_A 85 QTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEE---LTVYSKVVVEATG 159 (453)
T ss_dssp SCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEE---EEEECSEEEECCG
T ss_pred ceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCce---EEEEcCEEEECcC
Confidence 0000000 00014578899999999998765 4432 555532 2211 4799999999999
Q ss_pred CCCC
Q 035488 143 ENAE 146 (408)
Q Consensus 143 ~~~~ 146 (408)
.++.
T Consensus 160 ~~s~ 163 (453)
T 3atr_A 160 YSRS 163 (453)
T ss_dssp GGCT
T ss_pred Cchh
Confidence 7554
No 142
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.80 E-value=1.8e-08 Score=98.04 Aligned_cols=38 Identities=21% Similarity=0.497 Sum_probs=34.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIAS 56 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg 56 (408)
.+||+|||||++|+++|..|+++|++|+|+|+.+..+|
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 56999999999999999999999999999999864333
No 143
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.78 E-value=1.6e-08 Score=95.80 Aligned_cols=37 Identities=32% Similarity=0.460 Sum_probs=34.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCC-EEEEecCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVP-FIILERANCIA 55 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~-v~lie~~~~~g 55 (408)
.+||+|||||++|+++|..|++.|++ |+|||+.+.++
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 36899999999999999999999999 99999987654
No 144
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.71 E-value=2.1e-08 Score=94.04 Aligned_cols=34 Identities=24% Similarity=0.457 Sum_probs=32.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+||+|||||++|+++|.+|+++|++|+|||+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3699999999999999999999999999999984
No 145
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.71 E-value=2.8e-08 Score=93.06 Aligned_cols=37 Identities=22% Similarity=0.240 Sum_probs=33.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
.+||+|||||++|+++|..|++.|++|+|||+....+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~ 53 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGG 53 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCc
Confidence 5799999999999999999999999999999986443
No 146
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.69 E-value=5.2e-08 Score=97.51 Aligned_cols=37 Identities=32% Similarity=0.462 Sum_probs=33.9
Q ss_pred cCCcEEECCChHHHHHHHHHHH-cCCCEEEEecCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN-QGVPFIILERANCIA 55 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~-~g~~v~lie~~~~~g 55 (408)
.+||+||||||+|+++|..|++ .|++|+|||+.+.+.
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 4689999999999999999999 999999999987654
No 147
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.68 E-value=6.1e-08 Score=87.60 Aligned_cols=40 Identities=30% Similarity=0.494 Sum_probs=36.5
Q ss_pred CCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCC-ccC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCIAS-LWQ 59 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~gg-~w~ 59 (408)
+||+|||||++|+++|..|++. |++|+|+|+.+.+|| .|.
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~ 108 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccc
Confidence 5999999999999999999999 999999999988874 663
No 148
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.68 E-value=1.1e-07 Score=93.87 Aligned_cols=39 Identities=31% Similarity=0.507 Sum_probs=36.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASL 57 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~ 57 (408)
.+||+|||+|++|+++|..|++.|++|+|+|+.+.++|.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~ 164 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGN 164 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcc
Confidence 469999999999999999999999999999999888764
No 149
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.67 E-value=4.5e-08 Score=92.24 Aligned_cols=36 Identities=36% Similarity=0.587 Sum_probs=33.3
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
+||+|||||++|+++|..|+++|++|+|+|+.+..+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFN 40 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 589999999999999999999999999999987543
No 150
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.66 E-value=2.4e-08 Score=97.28 Aligned_cols=38 Identities=24% Similarity=0.387 Sum_probs=35.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIAS 56 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg 56 (408)
.+||||||||++|+++|..|++.|.+|+||||.+.+||
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG 78 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGG 78 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 47999999999999999999999999999999988876
No 151
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.64 E-value=5.3e-08 Score=91.42 Aligned_cols=37 Identities=27% Similarity=0.396 Sum_probs=33.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
.+||+|||||++|+++|.+|+++|++|+|||+....+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 3589999999999999999999999999999987554
No 152
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.55 E-value=4.3e-08 Score=92.56 Aligned_cols=36 Identities=33% Similarity=0.436 Sum_probs=33.1
Q ss_pred cCCcEEECCChHHHHHHHHHHH-cC-CCEEEEecCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN-QG-VPFIILERANCI 54 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~-~g-~~v~lie~~~~~ 54 (408)
.+||+|||||++|+++|.+|++ .| .+|+|||+.+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~ 58 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLA 58 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 4699999999999999999999 99 999999998733
No 153
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.52 E-value=3.8e-07 Score=91.49 Aligned_cols=36 Identities=31% Similarity=0.474 Sum_probs=32.8
Q ss_pred cCCcEEECCChHHHHHHHHHHH-----cCCCEEEEecCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN-----QGVPFIILERANCI 54 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~-----~g~~v~lie~~~~~ 54 (408)
.+||+||||||+|+++|..|++ .|++|+|||+.+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 3689999999999999999999 99999999997643
No 154
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.48 E-value=2.5e-08 Score=97.96 Aligned_cols=34 Identities=32% Similarity=0.464 Sum_probs=32.0
Q ss_pred cCCcEEECCChHHHHHHHHHHH---cCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN---QGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~---~g~~v~lie~~~ 52 (408)
++||+|||||++|+++|..|++ .|++|+|||+..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 5699999999999999999999 999999999965
No 155
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.47 E-value=7.7e-08 Score=92.57 Aligned_cols=106 Identities=14% Similarity=0.158 Sum_probs=73.5
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
..++|+|||||+.|+.+|..|++.|.+|+|+|+.+.+... .+. . ....+.+.+.+.++++
T Consensus 168 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~~-------~--------~~~~l~~~l~~~gV~i 227 (464)
T 2eq6_A 168 LPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-----GDP-------E--------TAALLRRALEKEGIRV 227 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----SCH-------H--------HHHHHHHHHHHTTCEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----cCH-------H--------HHHHHHHHHHhcCCEE
Confidence 3578999999999999999999999999999998754210 000 0 0000112233568999
Q ss_pred cccceeEEEEEcCCCCcEEEEEeec-CCCCcceEEEEeCEEEEeeCCCCCCCCC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISS-SDSSFCEVEYICRWLVVATGENAEKIEP 150 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~-~~~~~~~~~i~ad~vViAtG~~~~~~~p 150 (408)
+++++|++++... +.+.|++.++ .+.. .++.+|.||+|+| ..|+.+
T Consensus 228 ~~~~~v~~i~~~~--~~~~v~~~~~~~g~~---~~i~~D~vv~a~G--~~p~~~ 274 (464)
T 2eq6_A 228 RTKTKAVGYEKKK--DGLHVRLEPAEGGEG---EEVVVDKVLVAVG--RKPRTE 274 (464)
T ss_dssp ECSEEEEEEEEET--TEEEEEEEETTCCSC---EEEEESEEEECSC--EEESCT
T ss_pred EcCCEEEEEEEeC--CEEEEEEeecCCCce---eEEEcCEEEECCC--cccCCC
Confidence 9999999998765 4555666521 1222 4899999999999 555543
No 156
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.47 E-value=3.2e-08 Score=95.01 Aligned_cols=100 Identities=19% Similarity=0.182 Sum_probs=71.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||++|+.+|..|++.|.+|+++|+.+.+... .+. .....+.+.+.+.+++++
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-----~~~---------------~~~~~l~~~l~~~Gv~i~ 226 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-----MDL---------------EVSRAAERVFKKQGLTIR 226 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----SCH---------------HHHHHHHHHHHHHTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-----cCH---------------HHHHHHHHHHHHCCCEEE
Confidence 478999999999999999999999999999998753200 000 000001122335688999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++|++++... +.+.+++.++ .++.+|.||+|+| ..|+.
T Consensus 227 ~~~~V~~i~~~~--~~v~v~~~~g-------~~i~~D~vv~A~G--~~p~~ 266 (455)
T 2yqu_A 227 TGVRVTAVVPEA--KGARVELEGG-------EVLEADRVLVAVG--RRPYT 266 (455)
T ss_dssp CSCCEEEEEEET--TEEEEEETTS-------CEEEESEEEECSC--EEECC
T ss_pred ECCEEEEEEEeC--CEEEEEECCC-------eEEEcCEEEECcC--CCcCC
Confidence 999999998765 4555555432 5799999999999 44444
No 157
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.47 E-value=1.8e-07 Score=91.46 Aligned_cols=37 Identities=24% Similarity=0.451 Sum_probs=33.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIAS 56 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg 56 (408)
.+||+|||||++|+++|..|++ |.+|+|+||.+..+|
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 4699999999999999999999 999999999986654
No 158
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.46 E-value=4.5e-07 Score=92.00 Aligned_cols=39 Identities=38% Similarity=0.631 Sum_probs=36.3
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIAS 56 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg 56 (408)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+||
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 357999999999999999999999999999999888877
No 159
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.46 E-value=2.7e-07 Score=90.93 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=34.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIAS 56 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg 56 (408)
.+||+|||||.+|+++|..|+++|++|+|+|+.+..+|
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 57999999999999999999999999999999864444
No 160
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.45 E-value=1.3e-07 Score=89.45 Aligned_cols=35 Identities=29% Similarity=0.403 Sum_probs=32.5
Q ss_pred CCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCI 54 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~ 54 (408)
+||+|||||++|+++|..|+++ |++|+|||+....
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 6899999999999999999999 9999999997543
No 161
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.45 E-value=1.1e-06 Score=86.74 Aligned_cols=37 Identities=22% Similarity=0.353 Sum_probs=33.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
.+||+|||||++|++||..|++.|.+|+|+||....+
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~ 43 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTR 43 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 3599999999999999999999999999999987653
No 162
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.42 E-value=1.1e-06 Score=86.90 Aligned_cols=36 Identities=22% Similarity=0.338 Sum_probs=33.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcC--CCEEEEecCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQG--VPFIILERANCI 54 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g--~~v~lie~~~~~ 54 (408)
.+||+|||||++|+++|..|++.| .+|+||||....
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~ 42 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPM 42 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence 369999999999999999999999 999999998644
No 163
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.41 E-value=1.3e-06 Score=86.60 Aligned_cols=37 Identities=30% Similarity=0.357 Sum_probs=33.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
.+||||||||+||++||..|++.|.+|+|+||....+
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~ 54 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTR 54 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 4699999999999999999999999999999986443
No 164
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.39 E-value=1.9e-06 Score=82.84 Aligned_cols=156 Identities=15% Similarity=0.125 Sum_probs=85.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCccCCCCCCCeeeec--C---CccccCCCC--------CCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCIASLWQNRTYDRLKLHL--P---KQFCQLPNF--------PFP 83 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~gg~w~~~~~~~~~~~~--~---~~~~~~~~~--------~~~ 83 (408)
.++|+|||||..|+.+|..|++. +.+|+++++.+.+-.. ....+.... + ..+...+.. ...
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~----~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPA----DDSPFVNEVFAPKFTDLIYSREHAERERLLREYHN 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBC----CCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCc----cCCccchhccChhHHHHHhcCCHHHHHHHHHHhhc
Confidence 56899999999999999999999 8999999998753110 000000000 0 000000000 000
Q ss_pred CCCC-----------------CCCCccCccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCC
Q 035488 84 EDFP-----------------RVPHQFDINPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAE 146 (408)
Q Consensus 84 ~~~~-----------------~~~~~~~~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~ 146 (408)
..+. ......+++++.+++|+.+...+ +.+.|++.+..+++ ..++.+|.||+||| ..
T Consensus 303 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~--~~~~v~~~~~~~g~--~~~~~~D~Vv~AtG--~~ 376 (463)
T 3s5w_A 303 TNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATA--QGIELALRDAGSGE--LSVETYDAVILATG--YE 376 (463)
T ss_dssp GTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET--TEEEEEEEETTTCC--EEEEEESEEEECCC--EE
T ss_pred cCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC--CEEEEEEEEcCCCC--eEEEECCEEEEeeC--CC
Confidence 0000 00001478899999999998876 67888887543222 25799999999999 44
Q ss_pred CC--CCCCCCCCCcceeeeeccCCCCC-CCCCCCeEEEEcc
Q 035488 147 KI--EPEFEGLQHFEGNVMHAGDYKSG-ASYRGKRVLVVGC 184 (408)
Q Consensus 147 ~~--~p~~~g~~~~~~~~~~~~~~~~~-~~~~~~~v~VvG~ 184 (408)
|. .+-+.++....+.+.....+.-. ......+|.++|.
T Consensus 377 p~~~~~~l~~l~~~~g~i~v~~~~~~~~~~~~~~~Ifa~G~ 417 (463)
T 3s5w_A 377 RQLHRQLLEPLAEYLGDHEIGRDYRLQTDERCKVAIYAQGF 417 (463)
T ss_dssp CCC-CTTTGGGGGGBC--CCCTTSBCCBCTTBCSEEEESSC
T ss_pred CCCccchhHHHHHHhCCcccCcccccccCCCCCCeEEEcCC
Confidence 44 33333332211222232222211 1112446888885
No 165
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.37 E-value=7.1e-08 Score=92.41 Aligned_cols=102 Identities=21% Similarity=0.272 Sum_probs=70.7
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
..++|+|||||++|+.+|..|++.|.+|+++|+.+.+...+ ++. .....+.+.+.+.++++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~----~~~---------------~~~~~l~~~l~~~gv~i 208 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY----LDK---------------EFTDVLTEEMEANNITI 208 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----CCH---------------HHHHHHHHHHHTTTEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc----CCH---------------HHHHHHHHHHHhCCCEE
Confidence 35789999999999999999999999999999987543100 000 00001112233568999
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEP 150 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p 150 (408)
+++++|.+++..+ +.+.+++.+ .++.+|.||+|+| ..|+.+
T Consensus 209 ~~~~~v~~i~~~~--~v~~v~~~~--------~~i~~d~vi~a~G--~~p~~~ 249 (447)
T 1nhp_A 209 ATGETVERYEGDG--RVQKVVTDK--------NAYDADLVVVAVG--VRPNTA 249 (447)
T ss_dssp EESCCEEEEECSS--BCCEEEESS--------CEEECSEEEECSC--EEESCG
T ss_pred EcCCEEEEEEccC--cEEEEEECC--------CEEECCEEEECcC--CCCChH
Confidence 9999999998653 333455422 4799999999999 555443
No 166
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.36 E-value=1.5e-07 Score=90.26 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=71.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+.+... ++. . ....+.+.+.+.+++++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~~-------~--------~~~~l~~~l~~~gv~i~ 229 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG-----FEK-------Q--------MAAIIKKRLKKKGVEVV 229 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----SCH-------H--------HHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-----cCH-------H--------HHHHHHHHHHHCCCEEE
Confidence 578999999999999999999999999999998754210 000 0 00001122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
.+++|.+++... +...+++.+. +.. .++.+|.||+|+| ..|+.
T Consensus 230 ~~~~v~~i~~~~--~~~~v~~~~~-g~~---~~~~~D~vv~a~G--~~p~~ 272 (455)
T 1ebd_A 230 TNALAKGAEERE--DGVTVTYEAN-GET---KTIDADYVLVTVG--RRPNT 272 (455)
T ss_dssp ESEEEEEEEEET--TEEEEEEEET-TEE---EEEEESEEEECSC--EEESC
T ss_pred eCCEEEEEEEeC--CeEEEEEEeC-Cce---eEEEcCEEEECcC--CCccc
Confidence 999999998765 4455665421 111 5799999999999 45544
No 167
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.36 E-value=1.8e-06 Score=86.21 Aligned_cols=36 Identities=25% Similarity=0.353 Sum_probs=32.9
Q ss_pred cCCcEEECCChHHHHHHHHHH---H-cCCCEEEEecCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLK---N-QGVPFIILERANCI 54 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~---~-~g~~v~lie~~~~~ 54 (408)
.+||||||||+||++||..|+ + .|.+|+|+||....
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 579999999999999999999 6 89999999998743
No 168
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.34 E-value=1e-06 Score=78.94 Aligned_cols=190 Identities=13% Similarity=0.140 Sum_probs=99.1
Q ss_pred CeEEEEccCCcHHHHHHHHhcc-CCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhh
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNH-NAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVEK 255 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~-g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (408)
.+|+|||+|.+|+.+|..|++. |.+|+++.+.+. +..........+. ..+.... .... +..
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~-~gg~~~~~~~~~~------~~~~~~~---~~~~--------l~~ 101 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS-PGGGAWLGGQLFS------AMIVRKP---AHLF--------LDE 101 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS-CCTTTTCCSTTCC------CEEEETT---THHH--------HHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC-CCCceecCCcchH------HHHcCcH---HHHH--------HHH
Confidence 4799999999999999999997 999999998762 2110000000000 0000000 0000 011
Q ss_pred cCCCCCCCCCcccccCCCCCcccChhhhhhhc-cCCeEEecC--ccEEe--CCe---EEEe---------cC-----cEE
Q 035488 256 YGLKRPPTGPIELKNNEGKTPVLDIGALQKIR-SGDIKVVPG--IKKFS--PGK---VELV---------NG-----QVL 313 (408)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~--i~~~~--~~~---v~~~---------~g-----~~~ 313 (408)
.++.......... . .....+...+.+.+. ..+++++.+ +.++. ++. +.+. ++ ..+
T Consensus 102 ~G~~~~~~~~~~~-~--~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i 178 (284)
T 1rp0_A 102 IGVAYDEQDTYVV-V--KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVM 178 (284)
T ss_dssp HTCCCEECSSEEE-E--SCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEE
T ss_pred cCCCcccCCCEEE-e--cCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEE
Confidence 2221111000000 0 001111222334443 368998877 66664 332 3432 22 578
Q ss_pred ccCEEEEcCCCCCCCCCccccc--------ccccCCCCCCCCC------CCCCCCCCceEEEeecccc----------Cc
Q 035488 314 EIDSVVLATGYRSNVPSWLKEN--------EFFSENGIPKNPF------PNGWKGKTGLYAVGFTKRG----------LS 369 (408)
Q Consensus 314 ~~D~vi~atG~~~~~~~l~~~~--------~~~~~~g~~~~~~------~~~~t~~~~iya~Gd~~~~----------~~ 369 (408)
++|.||+|+|..+....+.... ++....|... +. ....+..|++|++|++... +.
T Consensus 179 ~ad~VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~-~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~ 257 (284)
T 1rp0_A 179 EAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDM-NTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFG 257 (284)
T ss_dssp EEEEEEECCCSSSTTTTHHHHHHHHTTSSSCCCCCEEECH-HHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCH
T ss_pred ECCEEEECCCCchHHHHHHHHHhhhccCCCCcCCcCCchh-hhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHH
Confidence 9999999999988764432111 1111122110 00 0123466999999986521 12
Q ss_pred cchhhHHHHHHHHHHHhhH
Q 035488 370 GASLDAMSVALDIAKSWKE 388 (408)
Q Consensus 370 ~a~~~a~~~a~~i~~~~~~ 388 (408)
.+..+|+.+|.+|...+..
T Consensus 258 ~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 258 AMMISGQKAGQLALKALGL 276 (284)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhHHHHHHHHHHHhhh
Confidence 5668999999999998754
No 169
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.34 E-value=4.4e-07 Score=93.72 Aligned_cols=35 Identities=29% Similarity=0.414 Sum_probs=32.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC-CEEEEecCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV-PFIILERANC 53 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~~ 53 (408)
.+||+|||||++|+++|++|+++|. +|+|||+...
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 3589999999999999999999998 9999999875
No 170
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.33 E-value=2.7e-07 Score=90.00 Aligned_cols=40 Identities=28% Similarity=0.518 Sum_probs=36.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHc-CCCEEEEecCCCCCCcc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ-GVPFIILERANCIASLW 58 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~~~~~gg~w 58 (408)
.+||+|||||++||+||..|+++ |++|+|+|+++.+||.-
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 46899999999999999999985 99999999999999954
No 171
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.33 E-value=1.9e-07 Score=90.17 Aligned_cols=105 Identities=17% Similarity=0.200 Sum_probs=72.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+...+. . . ....+.+.+.+.+++++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~-----~-------~--------~~~~l~~~l~~~gv~i~ 242 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMD-----G-------E--------VAKATQKFLKKQGLDFK 242 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSC-----H-------H--------HHHHHHHHHHHTTCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccC-----H-------H--------HHHHHHHHHHHCCCEEE
Confidence 57899999999999999999999999999999875432110 0 0 00011122335689999
Q ss_pred ccceeEEEEE--cCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKY--DETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~--~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++|++++. .. +.+.|++.+..++. ..++.+|.||+|+| ..|+.
T Consensus 243 ~~~~v~~i~~~~~~--~~~~v~~~~~~~g~--~~~~~~D~vv~a~G--~~p~~ 289 (478)
T 1v59_A 243 LSTKVISAKRNDDK--NVVEIVVEDTKTNK--QENLEAEVLLVAVG--RRPYI 289 (478)
T ss_dssp CSEEEEEEEEETTT--TEEEEEEEETTTTE--EEEEEESEEEECSC--EEECC
T ss_pred eCCEEEEEEEecCC--CeEEEEEEEcCCCC--ceEEECCEEEECCC--CCcCC
Confidence 9999999987 33 45556665211110 15799999999999 45544
No 172
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.32 E-value=1.5e-07 Score=90.21 Aligned_cols=101 Identities=16% Similarity=0.161 Sum_probs=72.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++|+.+.+... ++. . ....+.+.+.+.+++++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~~-------~--------~~~~l~~~l~~~Gv~i~ 226 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-----FDP-------M--------ISETLVEVMNAEGPQLH 226 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----SCH-------H--------HHHHHHHHHHHHSCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-----hhH-------H--------HHHHHHHHHHHCCCEEE
Confidence 578999999999999999999999999999998753210 000 0 00011122335688999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++|.+++..++ +.+.|++.++ .++.+|.||+|+| .+|+.
T Consensus 227 ~~~~v~~i~~~~~-~~~~v~~~~g-------~~i~~D~vv~a~G--~~p~~ 267 (450)
T 1ges_A 227 TNAIPKAVVKNTD-GSLTLELEDG-------RSETVDCLIWAIG--REPAN 267 (450)
T ss_dssp CSCCEEEEEECTT-SCEEEEETTS-------CEEEESEEEECSC--EEESC
T ss_pred eCCEEEEEEEeCC-cEEEEEECCC-------cEEEcCEEEECCC--CCcCC
Confidence 9999999987642 3355776554 4799999999999 45554
No 173
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.32 E-value=1.6e-07 Score=90.33 Aligned_cols=100 Identities=16% Similarity=0.155 Sum_probs=71.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ++.. + ...+.+.+.+.+++++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-----~~~~-------~--------~~~l~~~l~~~gv~i~ 225 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-----FDPL-------L--------SATLAENMHAQGIETH 225 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----SCHH-------H--------HHHHHHHHHHTTCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-----cCHH-------H--------HHHHHHHHHHCCCEEE
Confidence 568999999999999999999999999999998653210 0000 0 0001122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceE-EEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEV-EYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~-~i~ad~vViAtG~~~~~~~ 149 (408)
.+++|.+++... +.+.|++.++ . ++.+|.||+|+| ..|+.
T Consensus 226 ~~~~v~~i~~~~--~~~~v~~~~G-------~~~i~~D~vv~a~G--~~p~~ 266 (463)
T 2r9z_A 226 LEFAVAALERDA--QGTTLVAQDG-------TRLEGFDSVIWAVG--RAPNT 266 (463)
T ss_dssp SSCCEEEEEEET--TEEEEEETTC-------CEEEEESEEEECSC--EEESC
T ss_pred eCCEEEEEEEeC--CeEEEEEeCC-------cEEEEcCEEEECCC--CCcCC
Confidence 999999998765 3355766553 4 799999999999 45554
No 174
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.32 E-value=2.1e-06 Score=80.40 Aligned_cols=97 Identities=13% Similarity=0.114 Sum_probs=70.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++++|||||+.|+.+|..|++.|.+|+++|+.+.+.... .+. . ....+.+.+.+.+++++
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~----~~~-------~--------~~~~l~~~l~~~gv~i~ 205 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL----LHP-------A--------AAKAVQAGLEGLGVRFH 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----SCH-------H--------HHHHHHHHHHTTTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc----cCH-------H--------HHHHHHHHHHHcCCEEE
Confidence 5789999999999999999999999999999987532110 000 0 00011112234588999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
++++|.+++... +.+.|++.++ .++.+|.||+|+|.
T Consensus 206 ~~~~v~~i~~~~--~~~~v~~~~g-------~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 206 LGPVLASLKKAG--EGLEAHLSDG-------EVIPCDLVVSAVGL 241 (384)
T ss_dssp ESCCEEEEEEET--TEEEEEETTS-------CEEEESEEEECSCE
T ss_pred eCCEEEEEEecC--CEEEEEECCC-------CEEECCEEEECcCC
Confidence 999999998765 5556766553 57999999999994
No 175
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.31 E-value=5.2e-07 Score=86.48 Aligned_cols=42 Identities=10% Similarity=0.175 Sum_probs=39.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQN 60 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~ 60 (408)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+..
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 479999999999999999999999999999999999996554
No 176
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.29 E-value=8.4e-07 Score=84.27 Aligned_cols=47 Identities=32% Similarity=0.543 Sum_probs=40.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcC-CCEEEEecCCCCCCccCCCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQG-VPFIILERANCIASLWQNRTYDR 65 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g-~~v~lie~~~~~gg~w~~~~~~~ 65 (408)
.+||+|||||++|++||..|++.| .+|+|+|+.+.+||.+......+
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G 53 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHG 53 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCC
Confidence 468999999999999999999999 89999999999999765433333
No 177
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.28 E-value=1.8e-07 Score=89.87 Aligned_cols=101 Identities=15% Similarity=0.233 Sum_probs=69.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||++|+.+|..|++.|.+|+|+|+.+.+...+ +. . ....+.+.+.+.+++++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-----~~-------~--------~~~~l~~~l~~~gv~i~ 230 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTY-----DS-------E--------LTAPVAESLKKLGIALH 230 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTS-----CH-------H--------HHHHHHHHHHHHTCEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccccc-----CH-------H--------HHHHHHHHHHHCCCEEE
Confidence 5789999999999999999999999999999987542100 00 0 00011122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEP 150 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p 150 (408)
++++|+.++. + + ..++ ..++.. .++.+|.||+|+| .+|+.+
T Consensus 231 ~~~~v~~i~~-~--~-v~v~--~~~G~~---~~i~~D~vv~a~G--~~p~~~ 271 (458)
T 1lvl_A 231 LGHSVEGYEN-G--C-LLAN--DGKGGQ---LRLEADRVLVAVG--RRPRTK 271 (458)
T ss_dssp TTCEEEEEET-T--E-EEEE--CSSSCC---CEECCSCEEECCC--EEECCS
T ss_pred ECCEEEEEEe-C--C-EEEE--ECCCce---EEEECCEEEECcC--CCcCCC
Confidence 9999999986 3 3 3344 222222 4799999999999 555544
No 178
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.28 E-value=4.3e-07 Score=87.95 Aligned_cols=104 Identities=17% Similarity=0.186 Sum_probs=71.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+...+ +. . ....+.+.+.+. ++++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----d~-------~--------~~~~l~~~l~~~-V~i~ 232 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQ-----DE-------E--------MKRYAEKTFNEE-FYFD 232 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCC-----CH-------H--------HHHHHHHHHHTT-SEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccC-----CH-------H--------HHHHHHHHHhhC-cEEE
Confidence 5789999999999999999999999999999987542110 00 0 000001111233 7888
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEP 150 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p 150 (408)
++++|..++..+ +...+++.+.++.+ .++.+|.||+|+| ..|+..
T Consensus 233 ~~~~v~~i~~~~--~~v~v~~~~~~G~~---~~i~~D~Vi~a~G--~~p~~~ 277 (492)
T 3ic9_A 233 AKARVISTIEKE--DAVEVIYFDKSGQK---TTESFQYVLAATG--RKANVD 277 (492)
T ss_dssp TTCEEEEEEECS--SSEEEEEECTTCCE---EEEEESEEEECSC--CEESCS
T ss_pred ECCEEEEEEEcC--CEEEEEEEeCCCce---EEEECCEEEEeeC--CccCCC
Confidence 899999998766 45556665322222 5899999999999 555543
No 179
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.27 E-value=4.4e-07 Score=86.39 Aligned_cols=38 Identities=32% Similarity=0.509 Sum_probs=36.0
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASL 57 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~ 57 (408)
+||+|||||++|++||..|++.|.+|+|+|+++.+||.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 39 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGR 39 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCe
Confidence 68999999999999999999999999999999888874
No 180
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.26 E-value=5.1e-07 Score=87.51 Aligned_cols=104 Identities=15% Similarity=0.194 Sum_probs=74.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ++. . ....+.+.+.+.+++++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d~-------~--------~~~~l~~~l~~~gV~v~ 257 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-----MDG-------E--------VAKQLQRMLTKQGIDFK 257 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-----SCH-------H--------HHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-----CCH-------H--------HHHHHHHHHHhCCCEEE
Confidence 578999999999999999999999999999998754210 000 0 00001122335588999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecC-CCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSS-DSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~-~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
.+++|.+++..+ +...+++.+.. +.. .++.+|.||+|+| ..|+.
T Consensus 258 ~~~~v~~i~~~~--~~~~v~~~~~~~g~~---~~i~~D~Vi~a~G--~~p~~ 302 (491)
T 3urh_A 258 LGAKVTGAVKSG--DGAKVTFEPVKGGEA---TTLDAEVVLIATG--RKPST 302 (491)
T ss_dssp CSEEEEEEEEET--TEEEEEEEETTSCCC---EEEEESEEEECCC--CEECC
T ss_pred ECCeEEEEEEeC--CEEEEEEEecCCCce---EEEEcCEEEEeeC--CccCC
Confidence 999999998776 55667776533 222 6899999999999 55544
No 181
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.25 E-value=4.1e-07 Score=88.37 Aligned_cols=101 Identities=17% Similarity=0.080 Sum_probs=71.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ++.- ....+.+.+.+.+++++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d~~---------------~~~~l~~~l~~~gv~i~ 235 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-----FDES---------------VINVLENDMKKNNINIV 235 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-----SCHH---------------HHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-----cchh---------------hHHHHHHHHHhCCCEEE
Confidence 578999999999999999999999999999998753210 0000 00001122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEE-EEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVE-YICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~-i~ad~vViAtG~~~~~~~ 149 (408)
++++|.+++...+ +...|++.++ .+ +.+|.||+|+| ..|+.
T Consensus 236 ~~~~v~~i~~~~~-~~~~v~~~~g-------~~~~~~D~vi~a~G--~~p~~ 277 (500)
T 1onf_A 236 TFADVVEIKKVSD-KNLSIHLSDG-------RIYEHFDHVIYCVG--RSPDT 277 (500)
T ss_dssp CSCCEEEEEESST-TCEEEEETTS-------CEEEEESEEEECCC--BCCTT
T ss_pred ECCEEEEEEEcCC-ceEEEEECCC-------cEEEECCEEEECCC--CCcCC
Confidence 9999999987542 3355666543 34 99999999999 55554
No 182
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.25 E-value=3.8e-07 Score=88.84 Aligned_cols=101 Identities=10% Similarity=0.022 Sum_probs=72.7
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
.+++++|||||+.|+.+|..+++.|.+|+|+++...+++ ++. .....+...+.+.++.+
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~------~D~---------------ei~~~l~~~l~~~gi~~ 280 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG------FDQ---------------QCAVKVKLYMEEQGVMF 280 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT------SCH---------------HHHHHHHHHHHHTTCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc------cch---------------hHHHHHHHHHHhhccee
Confidence 367999999999999999999999999999998653321 000 00001112233568899
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEP 150 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p 150 (408)
+.+..+..+.... +...|++.++ .++.+|.|++|+| -+|+..
T Consensus 281 ~~~~~v~~~~~~~--~~~~v~~~~~-------~~~~~D~vLvAvG--R~Pnt~ 322 (542)
T 4b1b_A 281 KNGILPKKLTKMD--DKILVEFSDK-------TSELYDTVLYAIG--RKGDID 322 (542)
T ss_dssp EETCCEEEEEEET--TEEEEEETTS-------CEEEESEEEECSC--EEESCG
T ss_pred ecceEEEEEEecC--CeEEEEEcCC-------CeEEEEEEEEccc--ccCCcc
Confidence 9999999999877 5655666553 5788999999999 555543
No 183
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.25 E-value=1.9e-07 Score=90.33 Aligned_cols=104 Identities=14% Similarity=0.081 Sum_probs=71.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+.+... .+. . ....+.+.+.+.+++++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~-----~~~-------~--------~~~~l~~~l~~~gV~i~ 244 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG-----ADR-------D--------LVKVWQKQNEYRFDNIM 244 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----SCH-------H--------HHHHHHHHHGGGEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-----cCH-------H--------HHHHHHHHHHhcCCEEE
Confidence 578999999999999999999999999999998753210 000 0 00011122345689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++|.+++... +...|++.+..+.. .++.+|.||+|+| ..|+.
T Consensus 245 ~~~~v~~i~~~~--~~~~v~~~~~~~~g---~~~~~D~vv~a~G--~~p~~ 288 (482)
T 1ojt_A 245 VNTKTVAVEPKE--DGVYVTFEGANAPK---EPQRYDAVLVAAG--RAPNG 288 (482)
T ss_dssp CSCEEEEEEEET--TEEEEEEESSSCCS---SCEEESCEEECCC--EEECG
T ss_pred ECCEEEEEEEcC--CeEEEEEeccCCCc---eEEEcCEEEECcC--CCcCC
Confidence 999999998765 44556665411101 3678999999999 45543
No 184
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.25 E-value=6.2e-07 Score=83.06 Aligned_cols=42 Identities=31% Similarity=0.376 Sum_probs=39.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecC-CCCCCccCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERA-NCIASLWQN 60 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~-~~~gg~w~~ 60 (408)
.++|+|||||++|++||..|++.|++|+|+|++ +.+||.|..
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t 86 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKT 86 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceee
Confidence 579999999999999999999999999999999 999997764
No 185
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.23 E-value=7.8e-07 Score=84.44 Aligned_cols=39 Identities=36% Similarity=0.543 Sum_probs=36.4
Q ss_pred CcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQ 59 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~ 59 (408)
||+|||||++|+++|..|++.|++|+|+|+++.+||...
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFT 40 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeE
Confidence 799999999999999999999999999999999988543
No 186
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.22 E-value=6.6e-07 Score=87.30 Aligned_cols=39 Identities=28% Similarity=0.487 Sum_probs=36.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcC-CCEEEEecCCCCCCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQG-VPFIILERANCIASL 57 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g-~~v~lie~~~~~gg~ 57 (408)
.+||+|||||++||+||..|++.| ++|+|+|+.+.+||.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTT
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCc
Confidence 468999999999999999999999 999999999999884
No 187
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.22 E-value=1.3e-06 Score=83.18 Aligned_cols=103 Identities=20% Similarity=0.296 Sum_probs=69.6
Q ss_pred CeEEEEccCCcHHHHHHHHhccC--CccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhh
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHN--AKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVE 254 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g--~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 254 (408)
|+|+|||+|..|+.+|..|.+.+ .+|+++.+++.+..... +.......+ .
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~--------l~~v~~g~~--------------------~ 54 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPA--------FPHLAMGWR--------------------K 54 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGG--------HHHHHHTCS--------------------C
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCcc--------HHHHhcCCC--------------------C
Confidence 68999999999999999999865 68999998884332100 000000111 0
Q ss_pred hcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC-ccEEeCC--eEEEecCcEEccCEEEEcCCCCCC
Q 035488 255 KYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG-IKKFSPG--KVELVNGQVLEIDSVVLATGYRSN 327 (408)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~ 327 (408)
... ....+.+.+.+.+|+++.+ +++++.+ .|.+.+|+++++|.+|+|||.++.
T Consensus 55 ~~~--------------------i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 55 FED--------------------ISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp GGG--------------------SEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred HHH--------------------hhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc
Confidence 000 0001123445568998887 8888754 588999999999999999998754
No 188
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.21 E-value=4.8e-07 Score=87.15 Aligned_cols=104 Identities=14% Similarity=0.175 Sum_probs=71.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCC-CccCccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVP-HQFDINP 97 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 97 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ++. . ....+.+.+ .+.++++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d~-------~--------~~~~l~~~l~~~~gv~i 233 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-----LDE-------D--------VTNALVGALAKNEKMKF 233 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----SCH-------H--------HHHHHHHHHHHHTCCEE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-----CCH-------H--------HHHHHHHHHhhcCCcEE
Confidence 578999999999999999999999999999998754211 000 0 000111223 4558999
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
+++++|.+++... +.+.|++.+.++.. .++.+|.||+|+| ..|+.
T Consensus 234 ~~~~~v~~i~~~~--~~~~v~~~~~~g~~---~~i~~D~vv~a~G--~~p~~ 278 (468)
T 2qae_A 234 MTSTKVVGGTNNG--DSVSLEVEGKNGKR---ETVTCEALLVSVG--RRPFT 278 (468)
T ss_dssp ECSCEEEEEEECS--SSEEEEEECC---E---EEEEESEEEECSC--EEECC
T ss_pred EeCCEEEEEEEcC--CeEEEEEEcCCCce---EEEECCEEEECCC--cccCC
Confidence 9999999998765 44556665211111 5799999999999 44443
No 189
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.21 E-value=6.3e-07 Score=85.41 Aligned_cols=95 Identities=21% Similarity=0.258 Sum_probs=68.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..+++.|.+|+|+++.+.+...+. . .....+.+.+.+.+++++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d-----~---------------~~~~~~~~~l~~~gV~i~ 206 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMD-----A---------------DMNQPILDELDKREIPYR 206 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSC-----G---------------GGGHHHHHHHHHTTCCEE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccccc-----c---------------hhHHHHHHHhhccceEEE
Confidence 46899999999999999999999999999999875431110 0 000011122335688999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKI 148 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~ 148 (408)
.+++|..++... +++.++ .++.+|.|++|+| ..|+
T Consensus 207 ~~~~v~~~~~~~------v~~~~g-------~~~~~D~vl~a~G--~~Pn 241 (437)
T 4eqs_A 207 LNEEINAINGNE------ITFKSG-------KVEHYDMIIEGVG--THPN 241 (437)
T ss_dssp ESCCEEEEETTE------EEETTS-------CEEECSEEEECCC--EEES
T ss_pred eccEEEEecCCe------eeecCC-------eEEeeeeEEEEec--eecC
Confidence 999998886432 677664 5899999999999 5554
No 190
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.21 E-value=9.4e-07 Score=82.50 Aligned_cols=42 Identities=29% Similarity=0.331 Sum_probs=39.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQN 60 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~ 60 (408)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.+||.+..
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 579999999999999999999999999999999999997764
No 191
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=3.6e-07 Score=88.05 Aligned_cols=104 Identities=16% Similarity=0.203 Sum_probs=72.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... .+. . ....+.+.+.+.+++++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-----~~~-------~--------~~~~l~~~l~~~gv~i~ 236 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-----MDA-------E--------IRKQFQRSLEKQGMKFK 236 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----SCH-------H--------HHHHHHHHHHHSSCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-----ccH-------H--------HHHHHHHHHHHcCCEEE
Confidence 578999999999999999999999999999998754210 000 0 00001122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeec-CCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISS-SDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~-~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++|.+++... +...|++.+. ++.. .++.+|.||+|+| ..|+.
T Consensus 237 ~~~~v~~i~~~~--~~~~v~~~~~~~g~~---~~~~~D~vv~a~G--~~p~~ 281 (470)
T 1dxl_A 237 LKTKVVGVDTSG--DGVKLTVEPSAGGEQ---TIIEADVVLVSAG--RTPFT 281 (470)
T ss_dssp CSEEEEEEECSS--SSEEEEEEESSSCCC---EEEEESEEECCCC--EEECC
T ss_pred eCCEEEEEEEcC--CeEEEEEEecCCCcc---eEEECCEEEECCC--CCcCC
Confidence 999999998665 4455666532 1222 5799999999999 44443
No 192
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.19 E-value=5.3e-07 Score=87.04 Aligned_cols=103 Identities=15% Similarity=0.204 Sum_probs=73.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ++. .....+.+.+.+.+++++
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~~---------------~~~~~l~~~l~~~Gv~v~ 239 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA-----VDE---------------QVAKEAQKILTKQGLKIL 239 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----SCH---------------HHHHHHHHHHHHTTEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-----cCH---------------HHHHHHHHHHHhCCCEEE
Confidence 578999999999999999999999999999998753210 000 000011122335688999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
.+++|.+++..+ +...+++.++++ . .++.+|.||+|+| ..|+.
T Consensus 240 ~~~~v~~i~~~~--~~~~v~~~~~~g-~---~~~~~D~vi~a~G--~~p~~ 282 (476)
T 3lad_A 240 LGARVTGTEVKN--KQVTVKFVDAEG-E---KSQAFDKLIVAVG--RRPVT 282 (476)
T ss_dssp ETCEEEEEEECS--SCEEEEEESSSE-E---EEEEESEEEECSC--EEECC
T ss_pred ECCEEEEEEEcC--CEEEEEEEeCCC-c---EEEECCEEEEeeC--CcccC
Confidence 999999998766 555577765432 2 5799999999999 45544
No 193
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.19 E-value=1.1e-06 Score=84.86 Aligned_cols=44 Identities=25% Similarity=0.251 Sum_probs=39.3
Q ss_pred cccCCcEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCCccCC
Q 035488 17 IWVNGPVIVGAGPSGLAVAAGLKNQG--VPFIILERANCIASLWQN 60 (408)
Q Consensus 17 ~~~~~vvIIG~G~aGl~~A~~l~~~g--~~v~lie~~~~~gg~w~~ 60 (408)
|.++||+|||||++|+++|..|++.| ++|+|+|+.+.+||....
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~ 47 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVAT 47 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCE
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEE
Confidence 44679999999999999999999999 999999999999886543
No 194
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.19 E-value=8.4e-07 Score=84.26 Aligned_cols=39 Identities=31% Similarity=0.432 Sum_probs=36.2
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLW 58 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w 58 (408)
+||+|||||.+|++||.+|++.|++|+|+|+.+.+||..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~ 39 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRF 39 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCce
Confidence 379999999999999999999999999999999988743
No 195
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.19 E-value=1.2e-06 Score=82.52 Aligned_cols=42 Identities=26% Similarity=0.302 Sum_probs=39.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHc-CCCEEEEecCCCCCCccCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ-GVPFIILERANCIASLWQN 60 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~~~~~gg~w~~ 60 (408)
.+||+|||||++|++||..|++. |++|+|+|+++.+||.+..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 46999999999999999999999 9999999999999997654
No 196
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.19 E-value=4.9e-07 Score=87.00 Aligned_cols=103 Identities=17% Similarity=0.146 Sum_probs=71.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ++. . ....+.+.+.+.+++++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~~~-------~--------~~~~l~~~l~~~gv~i~ 230 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN-----EDA-------D--------VSKEIEKQFKKLGVTIL 230 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----SCH-------H--------HHHHHHHHHHHHTCEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-----cCH-------H--------HHHHHHHHHHHcCCEEE
Confidence 578999999999999999999999999999998753210 000 0 00001122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++|.+++... +...+++.+ ++.. .++.+|.||+|+| ..|+.
T Consensus 231 ~~~~v~~i~~~~--~~~~v~~~~-~g~~---~~~~~D~vv~a~G--~~p~~ 273 (464)
T 2a8x_A 231 TATKVESIADGG--SQVTVTVTK-DGVA---QELKAEKVLQAIG--FAPNV 273 (464)
T ss_dssp CSCEEEEEEECS--SCEEEEEES-SSCE---EEEEESEEEECSC--EEECC
T ss_pred eCcEEEEEEEcC--CeEEEEEEc-CCce---EEEEcCEEEECCC--CCccC
Confidence 999999998765 344455541 1111 5799999999999 45544
No 197
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.19 E-value=4.6e-07 Score=87.25 Aligned_cols=94 Identities=18% Similarity=0.168 Sum_probs=69.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. .+. . ....+.+.+.+.+++++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~~-------~--------~~~~l~~~l~~~Gv~i~ 234 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR------EDP-------A--------IGEAVTAAFRAEGIEVL 234 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT------SCH-------H--------HHHHHHHHHHHTTCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC------CCH-------H--------HHHHHHHHHHhCCCEEE
Confidence 57899999999999999999999999999999875321 000 0 00011122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
.+++|.+++..+ +.+.|++.+ .++.+|.||+|+|.
T Consensus 235 ~~~~v~~i~~~~--~~~~v~~~~--------~~i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 235 EHTQASQVAHMD--GEFVLTTTH--------GELRADKLLVATGR 269 (467)
T ss_dssp TTCCEEEEEEET--TEEEEEETT--------EEEEESEEEECSCE
T ss_pred cCCEEEEEEEeC--CEEEEEECC--------cEEEcCEEEECCCC
Confidence 999999998765 555566542 58999999999994
No 198
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.19 E-value=1.1e-06 Score=84.09 Aligned_cols=41 Identities=34% Similarity=0.537 Sum_probs=37.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQ 59 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~ 59 (408)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 46899999999999999999999999999999999998653
No 199
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.18 E-value=7.4e-07 Score=85.96 Aligned_cols=106 Identities=17% Similarity=0.290 Sum_probs=71.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... .++. . ....+.+.+.+.+++++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----~~~~-------~--------~~~~l~~~l~~~Gv~i~ 238 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV----GIDM-------E--------ISKNFQRILQKQGFKFK 238 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS----SCCH-------H--------HHHHHHHHHHHTTCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc----ccCH-------H--------HHHHHHHHHHHCCCEEE
Confidence 578999999999999999999999999999998753210 0000 0 00001122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeec-CCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISS-SDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~-~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++|.+++...+ +...+++.+. .+.. .++.+|.||+|+| ..|+.
T Consensus 239 ~~~~v~~i~~~~~-~~~~v~~~~~~~~~~---~~i~~D~vv~a~G--~~p~~ 284 (474)
T 1zmd_A 239 LNTKVTGATKKSD-GKIDVSIEAASGGKA---EVITCDVLLVCIG--RRPFT 284 (474)
T ss_dssp CSEEEEEEEECTT-SCEEEEEEETTSCCC---EEEEESEEEECSC--EEECC
T ss_pred eCceEEEEEEcCC-ceEEEEEEecCCCCc---eEEEcCEEEECcC--CCcCC
Confidence 9999999987652 2255665321 1111 5899999999999 45444
No 200
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.17 E-value=3.9e-06 Score=78.50 Aligned_cols=108 Identities=18% Similarity=0.279 Sum_probs=72.2
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhh
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVE 254 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 254 (408)
..-+|+|||+|..|+.+|..|...+.+|+++.+.+.....+. .+...+.... .
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~-------~l~~~l~g~~--------------------~ 60 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRP-------RLNEIIAKNK--------------------S 60 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGG-------GHHHHHHSCC--------------------C
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccC-------hhhHHHcCCC--------------------C
Confidence 445799999999999999999878889999998873111111 1111111111 0
Q ss_pred hcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC--eEEEecCcEEccCEEEEcCCCCCCCC
Q 035488 255 KYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG--KVELVNGQVLEIDSVVLATGYRSNVP 329 (408)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 329 (408)
. ..+.....+.+++.+++++.+ +.+++.. .|.+.+|+++.+|.+|+|||.+|..+
T Consensus 61 ~--------------------~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 61 I--------------------DDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp G--------------------GGTBSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCC
T ss_pred H--------------------HHccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCC
Confidence 0 001111233445668888876 7788754 58888999999999999999988753
No 201
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.17 E-value=1.1e-06 Score=82.12 Aligned_cols=42 Identities=26% Similarity=0.362 Sum_probs=38.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQN 60 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~ 60 (408)
.++|+|||||++|+++|..|++.|++|+|+|+++.+||.|+.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 358999999999999999999999999999999999998754
No 202
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.17 E-value=2.8e-07 Score=89.07 Aligned_cols=96 Identities=24% Similarity=0.333 Sum_probs=68.1
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
..++|+|||||+.|+.+|..|++.|.+|+++++.+.+...+ +. . ....+.+.+.+.++++
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-----~~-------~--------~~~~l~~~l~~~Gv~i 244 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIY-----DG-------D--------MAEYIYKEADKHHIEI 244 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSS-----CH-------H--------HHHHHHHHHHHTTCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcC-----CH-------H--------HHHHHHHHHHHcCcEE
Confidence 35789999999999999999999999999999987543110 00 0 0001112233568899
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
+++++|.+++... +.+.+.+.+ .++.+|.||+|+|.
T Consensus 245 ~~~~~v~~i~~~~--~v~~v~~~~--------~~i~~D~vi~a~G~ 280 (480)
T 3cgb_A 245 LTNENVKAFKGNE--RVEAVETDK--------GTYKADLVLVSVGV 280 (480)
T ss_dssp ECSCCEEEEEESS--BEEEEEETT--------EEEECSEEEECSCE
T ss_pred EcCCEEEEEEcCC--cEEEEEECC--------CEEEcCEEEECcCC
Confidence 9999999998653 333444432 58999999999994
No 203
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.17 E-value=6.2e-07 Score=87.08 Aligned_cols=96 Identities=11% Similarity=0.111 Sum_probs=69.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++++|||||+.|+.+|..+++.|.+|+++++.+.+... ++. . ....+.+.+.+.+++++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d~-------~--------~~~~l~~~l~~~GV~i~ 241 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-----EDA-------D--------AALVLEESFAERGVRLF 241 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-----SSH-------H--------HHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-----cCH-------H--------HHHHHHHHHHHCCCEEE
Confidence 578999999999999999999999999999998753210 000 0 00011122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
++++|++++... +.+.|++.++ .++.+|.||+|+|.
T Consensus 242 ~~~~V~~i~~~~--~~v~v~~~~g-------~~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 242 KNARAASVTRTG--AGVLVTMTDG-------RTVEGSHALMTIGS 277 (499)
T ss_dssp TTCCEEEEEECS--SSEEEEETTS-------CEEEESEEEECCCE
T ss_pred eCCEEEEEEEeC--CEEEEEECCC-------cEEEcCEEEECCCC
Confidence 999999998765 4444554332 57999999999994
No 204
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.17 E-value=1.2e-06 Score=85.07 Aligned_cols=43 Identities=28% Similarity=0.378 Sum_probs=39.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNR 61 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~ 61 (408)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||.+...
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~ 55 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSV 55 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeee
Confidence 4689999999999999999999999999999999999976543
No 205
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.17 E-value=2.4e-06 Score=82.55 Aligned_cols=49 Identities=27% Similarity=0.386 Sum_probs=41.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcC-CCEEEEecCCCCCCccCCC-CCCCee
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQG-VPFIILERANCIASLWQNR-TYDRLK 67 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g-~~v~lie~~~~~gg~w~~~-~~~~~~ 67 (408)
.+||+|||||++|+++|..|++.| .+|+|+|+.+.+||.|... .+.+..
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~ 59 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFT 59 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcE
Confidence 579999999999999999999998 7999999999999987652 344443
No 206
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.16 E-value=5.4e-07 Score=87.26 Aligned_cols=101 Identities=17% Similarity=0.149 Sum_probs=72.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHc---CCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ---GVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDI 95 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~---g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (408)
.++++|||||+.|+.+|..|++. |.+|+++++.+.+... ++. . ....+.+.+.+.++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-----~d~-------~--------~~~~l~~~l~~~GV 246 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG-----FDS-------E--------LRKQLTEQLRANGI 246 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT-----SCH-------H--------HHHHHHHHHHHTTE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc-----cCH-------H--------HHHHHHHHHHhCCC
Confidence 57899999999999999999999 9999999998753210 000 0 00011122335689
Q ss_pred cccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 96 NPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 96 ~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
+++++++|.+++..++ +.+.|++.++ .++.+|.||+|+| ..|+.
T Consensus 247 ~i~~~~~v~~i~~~~~-~~~~v~~~~G-------~~i~~D~vv~a~G--~~p~~ 290 (490)
T 1fec_A 247 NVRTHENPAKVTKNAD-GTRHVVFESG-------AEADYDVVMLAIG--RVPRS 290 (490)
T ss_dssp EEEETCCEEEEEECTT-SCEEEEETTS-------CEEEESEEEECSC--EEESC
T ss_pred EEEeCCEEEEEEEcCC-CEEEEEECCC-------cEEEcCEEEEccC--CCcCc
Confidence 9999999999987642 3455766553 4799999999999 44544
No 207
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.16 E-value=6.1e-07 Score=87.62 Aligned_cols=99 Identities=12% Similarity=0.102 Sum_probs=70.5
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccccc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPRF 99 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (408)
++++|||||+.|+.+|..|++.|.+|+++++.+.+... .+. . ....+.+.+.+.++++++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-----~~~-------~--------~~~~l~~~l~~~GV~i~~ 274 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-----KDN-------E--------TRAYVLDRMKEQGMEIIS 274 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-----CSH-------H--------HHHHHHHHHHHTTCEEES
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-----ccH-------H--------HHHHHHHHHHhCCcEEEE
Confidence 78999999999999999999999999999998753210 000 0 000111223356899999
Q ss_pred cceeEEEEEcCCCCc---EEEEEeecCCCCcceE-EEEeCEEEEeeCCCCCCC
Q 035488 100 NETVQSAKYDETFGF---WRIKTISSSDSSFCEV-EYICRWLVVATGENAEKI 148 (408)
Q Consensus 100 ~~~V~~i~~~~~~~~---~~V~~~~~~~~~~~~~-~i~ad~vViAtG~~~~~~ 148 (408)
+++|++++..++ +. +.|++.++ . ++.+|.||+|+| ..|+
T Consensus 275 ~~~V~~i~~~~~-~~v~~~~v~~~~G-------~~~i~aD~Vv~A~G--~~p~ 317 (523)
T 1mo9_A 275 GSNVTRIEEDAN-GRVQAVVAMTPNG-------EMRIETDFVFLGLG--EQPR 317 (523)
T ss_dssp SCEEEEEEECTT-SBEEEEEEEETTE-------EEEEECSCEEECCC--CEEC
T ss_pred CCEEEEEEEcCC-CceEEEEEEECCC-------cEEEEcCEEEECcC--CccC
Confidence 999999987542 32 55666543 3 799999999999 4444
No 208
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.14 E-value=1.5e-06 Score=84.90 Aligned_cols=39 Identities=31% Similarity=0.484 Sum_probs=36.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASL 57 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~ 57 (408)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 368999999999999999999999999999999988873
No 209
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.14 E-value=5.8e-07 Score=87.09 Aligned_cols=101 Identities=17% Similarity=0.117 Sum_probs=71.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHc---CCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ---GVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDI 95 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~---g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (408)
.++++|||||+.|+.+|..|++. |.+|+++++.+.+... ++. . ....+.+.+.+.++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-----~d~-------~--------~~~~l~~~l~~~GV 250 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-----FDE-------T--------IREEVTKQLTANGI 250 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT-----SCH-------H--------HHHHHHHHHHHTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc-----cCH-------H--------HHHHHHHHHHhCCC
Confidence 57899999999999999999999 9999999998753210 000 0 00011122335689
Q ss_pred cccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 96 NPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 96 ~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
+++++++|.+++...+ +...|++.++ .++.+|.||+|+| ..|+.
T Consensus 251 ~i~~~~~v~~i~~~~~-~~~~v~~~~G-------~~i~~D~vv~a~G--~~p~~ 294 (495)
T 2wpf_A 251 EIMTNENPAKVSLNTD-GSKHVTFESG-------KTLDVDVVMMAIG--RIPRT 294 (495)
T ss_dssp EEEESCCEEEEEECTT-SCEEEEETTS-------CEEEESEEEECSC--EEECC
T ss_pred EEEeCCEEEEEEEcCC-ceEEEEECCC-------cEEEcCEEEECCC--Ccccc
Confidence 9999999999987642 3455766553 4799999999999 44543
No 210
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.13 E-value=1.2e-05 Score=76.95 Aligned_cols=101 Identities=16% Similarity=0.184 Sum_probs=70.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+.... ++.- ....+.+.+.+.+++++
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----~d~~---------------~~~~l~~~l~~~GV~i~ 207 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY----FDKE---------------MVAEVQKSLEKQAVIFH 207 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----CCHH---------------HHHHHHHHHHTTTEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc----CCHH---------------HHHHHHHHHHHcCCEEE
Confidence 5789999999999999999999999999999987532100 0000 00011122235689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEP 150 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p 150 (408)
++++|.+++..+ +.+.|++.+ .++.+|.||+|+| ..|+..
T Consensus 208 ~~~~v~~i~~~~--~~v~v~~~~--------g~i~aD~Vv~A~G--~~p~~~ 247 (452)
T 3oc4_A 208 FEETVLGIEETA--NGIVLETSE--------QEISCDSGIFALN--LHPQLA 247 (452)
T ss_dssp ETCCEEEEEECS--SCEEEEESS--------CEEEESEEEECSC--CBCCCS
T ss_pred eCCEEEEEEccC--CeEEEEECC--------CEEEeCEEEECcC--CCCChH
Confidence 999999998655 444565543 3789999999999 555543
No 211
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.12 E-value=7.3e-06 Score=77.54 Aligned_cols=101 Identities=18% Similarity=0.206 Sum_probs=71.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.... .+. .....+.+.+.+.+++++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~----~~~---------------~~~~~l~~~l~~~GV~i~ 212 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV----AGE---------------ALSEFYQAEHRAHGVDLR 212 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----SCH---------------HHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh----cCH---------------HHHHHHHHHHHhCCCEEE
Confidence 5689999999999999999999999999999987532100 000 000001122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKI 148 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~ 148 (408)
++++|..+...+. +...|++.++ .++.+|.||+|+| ..|+
T Consensus 213 ~~~~v~~i~~~~~-~v~~v~l~dG-------~~i~aD~Vv~a~G--~~p~ 252 (415)
T 3lxd_A 213 TGAAMDCIEGDGT-KVTGVRMQDG-------SVIPADIVIVGIG--IVPC 252 (415)
T ss_dssp ETCCEEEEEESSS-BEEEEEESSS-------CEEECSEEEECSC--CEES
T ss_pred ECCEEEEEEecCC-cEEEEEeCCC-------CEEEcCEEEECCC--CccC
Confidence 9999999987642 3334666664 5899999999999 4444
No 212
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.12 E-value=1.1e-06 Score=84.45 Aligned_cols=40 Identities=23% Similarity=0.323 Sum_probs=36.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcC------CCEEEEecCCCCCCcc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQG------VPFIILERANCIASLW 58 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g------~~v~lie~~~~~gg~w 58 (408)
++||+|||||++|++||.+|++.| ++|+|+|+.+.+||..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceE
Confidence 368999999999999999999999 9999999999998843
No 213
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.11 E-value=2e-06 Score=83.25 Aligned_cols=40 Identities=28% Similarity=0.424 Sum_probs=37.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLW 58 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w 58 (408)
.+||+|||||++|++||..|++.|++|+|+|+.+.+||.+
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 5689999999999999999999999999999999999953
No 214
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.11 E-value=1.3e-06 Score=84.39 Aligned_cols=41 Identities=22% Similarity=0.343 Sum_probs=37.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCCccC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV--PFIILERANCIASLWQ 59 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~--~v~lie~~~~~gg~w~ 59 (408)
++||+|||||++|+++|.+|++.|. +|+|+|+.+.+||...
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~ 44 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIR 44 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCC
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceE
Confidence 3589999999999999999999999 9999999999988543
No 215
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.11 E-value=9.6e-07 Score=85.13 Aligned_cols=97 Identities=21% Similarity=0.219 Sum_probs=69.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHc-CCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ-GVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
.++|+|||+|+.|+.+|..|++. |.+|+++++.+.+... .++. .....+.+.+.+.++++
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~----~~~~---------------~~~~~l~~~l~~~GV~i 219 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG----FTSK---------------SLSQMLRHDLEKNDVVV 219 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT----TSCH---------------HHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc----ccCH---------------HHHHHHHHHHHhcCCEE
Confidence 56899999999999999999999 9999999997643210 0000 00001112233568999
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
+.+++|.+++..+ +...|++.++ .++.+|.||+|+|.
T Consensus 220 ~~~~~v~~i~~~~--~~v~v~~~~g-------~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 220 HTGEKVVRLEGEN--GKVARVITDK-------RTLDADLVILAAGV 256 (472)
T ss_dssp ECSCCEEEEEESS--SBEEEEEESS-------CEEECSEEEECSCE
T ss_pred EeCCEEEEEEccC--CeEEEEEeCC-------CEEEcCEEEECCCC
Confidence 9999999998755 5555666654 58999999999993
No 216
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.11 E-value=9.1e-07 Score=85.41 Aligned_cols=103 Identities=16% Similarity=0.105 Sum_probs=71.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++++|||||+.|+.+|..|++.|.+|+++++.+.+... ++. . ....+.+.+.+.+++++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d~-------~--------~~~~l~~~l~~~Gv~i~ 244 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-----FDE-------C--------IQNTITDHYVKEGINVH 244 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----SCH-------H--------HHHHHHHHHHHHTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-----cCH-------H--------HHHHHHHHHHhCCeEEE
Confidence 578999999999999999999999999999998753210 000 0 00011122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++|.+++...+.....|++.++. .++.+|.||+|+| .+|+.
T Consensus 245 ~~~~v~~i~~~~~~~~~~v~~~~G~------~~i~~D~vv~a~G--~~p~~ 287 (479)
T 2hqm_A 245 KLSKIVKVEKNVETDKLKIHMNDSK------SIDDVDELIWTIG--RKSHL 287 (479)
T ss_dssp CSCCEEEEEECC-CCCEEEEETTSC------EEEEESEEEECSC--EEECC
T ss_pred eCCEEEEEEEcCCCcEEEEEECCCc------EEEEcCEEEECCC--CCCcc
Confidence 9999999987542123556665421 3799999999999 44443
No 217
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.11 E-value=6.7e-06 Score=77.64 Aligned_cols=104 Identities=16% Similarity=0.198 Sum_probs=69.7
Q ss_pred CeEEEEccCCcHHHHHHHHhc---cCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhh
Q 035488 177 KRVLVVGCGNSGMEVSLDLCN---HNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNV 253 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~---~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (408)
++|+|||+|.+|+.+|..|++ .|.+|+++.+++..... ...
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~-~~~----------------------------------- 45 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFR-PAL----------------------------------- 45 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEEC-CSS-----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceec-cch-----------------------------------
Confidence 579999999999999999999 89999999998832211 000
Q ss_pred hhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC-ccEEeCC--eEEEecCcE----EccCEEEEcCCCCC
Q 035488 254 EKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG-IKKFSPG--KVELVNGQV----LEIDSVVLATGYRS 326 (408)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~--~v~~~~g~~----~~~D~vi~atG~~~ 326 (408)
.. . . ........+...+.+.+.+.+++++.+ +.+++.+ .|.+.+++. +.+|.||+|||.+|
T Consensus 46 ~~-------~----~-~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 46 PH-------V----A-IGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp CC-------C----C-SSCCCCCCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEE
T ss_pred hh-------c----c-cCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCc
Confidence 00 0 0 000000111222344455668888877 7777654 577777764 89999999999988
Q ss_pred CC
Q 035488 327 NV 328 (408)
Q Consensus 327 ~~ 328 (408)
+.
T Consensus 114 ~~ 115 (409)
T 3h8l_A 114 AT 115 (409)
T ss_dssp CG
T ss_pred Cc
Confidence 75
No 218
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.10 E-value=6.5e-07 Score=86.70 Aligned_cols=101 Identities=21% Similarity=0.310 Sum_probs=69.1
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
..++|+|||||+.|+.+|..|++.|.+|+++++.+.+... .++. .....+.+.+.+.++++
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----~~~~---------------~~~~~l~~~l~~~GV~i 253 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG----YYDR---------------DLTDLMAKNMEEHGIQL 253 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----TSCH---------------HHHHHHHHHHHTTTCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh----HHHH---------------HHHHHHHHHHHhCCeEE
Confidence 3578999999999999999999999999999998753210 0000 00001112233568999
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
+++++|++++.+. +...|++ ++ .++.+|.||+|+| .+|+.
T Consensus 254 ~~~~~v~~i~~~~--~v~~v~~-~g-------~~i~~D~Vi~a~G--~~p~~ 293 (490)
T 2bc0_A 254 AFGETVKEVAGNG--KVEKIIT-DK-------NEYDVDMVILAVG--FRPNT 293 (490)
T ss_dssp EETCCEEEEECSS--SCCEEEE-SS-------CEEECSEEEECCC--EEECC
T ss_pred EeCCEEEEEEcCC--cEEEEEE-CC-------cEEECCEEEECCC--CCcCh
Confidence 9999999998632 3222444 32 4799999999999 45544
No 219
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.10 E-value=2.1e-06 Score=82.79 Aligned_cols=40 Identities=33% Similarity=0.452 Sum_probs=37.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLW 58 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w 58 (408)
.+||+|||||++|++||..|++.|++|+|+|+.+.+||..
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 5799999999999999999999999999999999999843
No 220
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.10 E-value=7.7e-07 Score=86.07 Aligned_cols=100 Identities=20% Similarity=0.219 Sum_probs=72.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++++|||+|+.|+.+|..+++.|.+|+++++.+.+... ++.. ....+.+.+.+.+++++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-----~~~~---------------~~~~l~~~l~~~Gv~i~ 250 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN-----FDYD---------------LRQLLNDAMVAKGISII 250 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----SCHH---------------HHHHHHHHHHHHTCEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc-----cCHH---------------HHHHHHHHHHHCCCEEE
Confidence 578999999999999999999999999999998753210 0000 00011122335688999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
.+++|.+++..+ +.+.|++.++ .++.+|.||+|+| ..|..
T Consensus 251 ~~~~V~~i~~~~--~~v~v~~~~g-------~~i~aD~Vi~A~G--~~p~~ 290 (484)
T 3o0h_A 251 YEATVSQVQSTE--NCYNVVLTNG-------QTICADRVMLATG--RVPNT 290 (484)
T ss_dssp SSCCEEEEEECS--SSEEEEETTS-------CEEEESEEEECCC--EEECC
T ss_pred eCCEEEEEEeeC--CEEEEEECCC-------cEEEcCEEEEeeC--CCcCC
Confidence 999999998766 4556777654 5899999999999 44443
No 221
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.09 E-value=4.6e-06 Score=78.49 Aligned_cols=105 Identities=18% Similarity=0.199 Sum_probs=69.8
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccC--CccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhh
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHN--AKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGN 252 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g--~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 252 (408)
.+|+|+|||+|..|+.+|..|.+.+ .+|+++.+++.+...... ...+....+
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~--------~~v~~g~~~------------------ 54 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMS--------NEVIGGDRE------------------ 54 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTH--------HHHHHTSSC------------------
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCH--------HHHhcCCCC------------------
Confidence 3789999999999999999998865 479999887733221000 000000000
Q ss_pred hhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC-ccEEeCC--eEEEecCcEEccCEEEEcCCCCCCC
Q 035488 253 VEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG-IKKFSPG--KVELVNGQVLEIDSVVLATGYRSNV 328 (408)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~ 328 (408)
... + ..-.+.+...+++++.+ ++.++.+ .+.+.+|+++.+|.+++|||.+++.
T Consensus 55 ~~~--~---------------------~~~~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~ 110 (401)
T 3vrd_B 55 LAS--L---------------------RVGYDGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLY 110 (401)
T ss_dssp GGG--G---------------------EECSHHHHHTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEECG
T ss_pred HHH--H---------------------hhCHHHHHHCCCEEEEeEEEEEEccCcEEEecccceeecceeeeccCCcccc
Confidence 000 0 00023344568888877 8888764 4888899999999999999998875
No 222
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.09 E-value=3.5e-06 Score=80.35 Aligned_cols=104 Identities=12% Similarity=0.251 Sum_probs=70.5
Q ss_pred CeEEEEccCCcHHHHHHHHhc---cCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhh
Q 035488 177 KRVLVVGCGNSGMEVSLDLCN---HNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNV 253 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~---~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 253 (408)
++|+|||+|..|+.+|..|++ .+.+|+++.+++....... +..........
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~--------~~~~~~g~~~~------------------ 58 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPS--------NPWVGVGWKER------------------ 58 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGG--------HHHHHHTSSCH------------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCC--------ccccccCccCH------------------
Confidence 689999999999999999999 7899999998883221110 00000011000
Q ss_pred hhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC-ccEEeCC--eEEEecCcEEccCEEEEcCCCCCCC
Q 035488 254 EKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG-IKKFSPG--KVELVNGQVLEIDSVVLATGYRSNV 328 (408)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~ 328 (408)
..+...+.+.+.+.+++++.+ +..++.+ .|.+.+++++.+|.||+|||.+|+.
T Consensus 59 ----------------------~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 59 ----------------------DDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAF 114 (437)
T ss_dssp ----------------------HHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEECG
T ss_pred ----------------------HHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCc
Confidence 000111234445567888766 7777764 5888889899999999999998875
No 223
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.09 E-value=1.9e-06 Score=80.12 Aligned_cols=40 Identities=28% Similarity=0.336 Sum_probs=37.3
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQ 59 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~ 59 (408)
+||+|||||++|+++|..|++.|++|+|+|+.+.+||...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~ 41 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAY 41 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceE
Confidence 4899999999999999999999999999999999998654
No 224
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.07 E-value=1.7e-06 Score=83.59 Aligned_cols=110 Identities=15% Similarity=0.059 Sum_probs=72.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ++.- ....+.+.+.+.+++++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d~~---------------~~~~~~~~l~~~gv~i~ 246 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS-----FDSM---------------ISTNCTEELENAGVEVL 246 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----SCHH---------------HHHHHHHHHHHTTCEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc-----cCHH---------------HHHHHHHHHHHCCCEEE
Confidence 578999999999999999999999999999997753210 0000 00001122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEP 150 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p 150 (408)
.+++|..++...+.....|++.+...++....++.+|.||+|+| ..|+..
T Consensus 247 ~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G--~~p~~~ 296 (478)
T 3dk9_A 247 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIG--RVPNTK 296 (478)
T ss_dssp TTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSC--EEESCT
T ss_pred eCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeec--cccCCC
Confidence 99999999876531134566654321110004789999999999 455443
No 225
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.07 E-value=1e-05 Score=76.18 Aligned_cols=98 Identities=17% Similarity=0.187 Sum_probs=69.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.... .+. .....+.+.+.+.+++++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~----~~~---------------~~~~~l~~~l~~~GV~i~ 202 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV----VTP---------------EISSYFHDRHSGAGIRMH 202 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----SCH---------------HHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc----cCH---------------HHHHHHHHHHHhCCcEEE
Confidence 5689999999999999999999999999999987532100 000 000011122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
++++|.++...+. +...|++.++ .++.+|.||+|+|.
T Consensus 203 ~~~~v~~i~~~~~-~v~~V~~~dG-------~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 203 YGVRATEIAAEGD-RVTGVVLSDG-------NTLPCDLVVVGVGV 239 (404)
T ss_dssp CSCCEEEEEEETT-EEEEEEETTS-------CEEECSEEEECCCE
T ss_pred ECCEEEEEEecCC-cEEEEEeCCC-------CEEEcCEEEECcCC
Confidence 9999999987642 3334666654 58999999999993
No 226
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.06 E-value=1.4e-06 Score=85.94 Aligned_cols=98 Identities=19% Similarity=0.282 Sum_probs=68.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ++. . ....+.+.+.+.+++++
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~~-------~--------~~~~l~~~l~~~GV~i~ 210 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP-----VDR-------E--------MAGFAHQAIRDQGVDLR 210 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-----SCH-------H--------HHHHHHHHHHHTTCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-----cCH-------H--------HHHHHHHHHHHCCCEEE
Confidence 468999999999999999999999999999998753210 000 0 00001112335688999
Q ss_pred ccceeEEEEEcC-----------------CCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 99 FNETVQSAKYDE-----------------TFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 99 ~~~~V~~i~~~~-----------------~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
++++|.+++... ..+...+++.++ .++.+|.||+|+|.
T Consensus 211 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-------~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 211 LGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNG-------ELLETDLLIMAIGV 265 (565)
T ss_dssp ETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTS-------CEEEESEEEECSCE
T ss_pred eCCeEEEEeccccccccccccccccccccCCCcEEEEEcCC-------CEEEcCEEEECcCC
Confidence 999999998730 114445555443 58999999999993
No 227
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.06 E-value=1.1e-05 Score=76.20 Aligned_cols=93 Identities=22% Similarity=0.275 Sum_probs=67.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.... .+. . ....+.+.+.+.+++++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----~~~-------~--------~~~~l~~~l~~~GV~i~ 205 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA----APA-------T--------LADFVARYHAAQGVDLR 205 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----SCH-------H--------HHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc----cCH-------H--------HHHHHHHHHHHcCcEEE
Confidence 5789999999999999999999999999999987532100 000 0 00011122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
.+++|.+++ + + .|++.++ .++.+|.||+|+|.
T Consensus 206 ~~~~v~~i~--~--~--~v~~~~g-------~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 206 FERSVTGSV--D--G--VVLLDDG-------TRIAADMVVVGIGV 237 (408)
T ss_dssp ESCCEEEEE--T--T--EEEETTS-------CEEECSEEEECSCE
T ss_pred eCCEEEEEE--C--C--EEEECCC-------CEEEcCEEEECcCC
Confidence 999999998 3 3 3777654 58999999999993
No 228
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.06 E-value=3.8e-07 Score=84.83 Aligned_cols=92 Identities=18% Similarity=0.229 Sum_probs=66.3
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccccc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPRF 99 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (408)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. ++. . ....+.+.+++.+++++.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~~-------~--------~~~~l~~~l~~~gV~i~~ 202 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------LDE-------E--------LSNMIKDMLEETGVKFFL 202 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------CCH-------H--------HHHHHHHHHHHTTEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------CCH-------H--------HHHHHHHHHHHCCCEEEc
Confidence 6899999999999999999999999999999875421 000 0 000111223356889999
Q ss_pred cceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCC
Q 035488 100 NETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKI 148 (408)
Q Consensus 100 ~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~ 148 (408)
+++|.+++ . .. |++.++ . +.+|.||+|+| ..|+
T Consensus 203 ~~~v~~i~--~--~~--v~~~~g-------~-i~~D~vi~a~G--~~p~ 235 (367)
T 1xhc_A 203 NSELLEAN--E--EG--VLTNSG-------F-IEGKVKICAIG--IVPN 235 (367)
T ss_dssp SCCEEEEC--S--SE--EEETTE-------E-EECSCEEEECC--EEEC
T ss_pred CCEEEEEE--e--eE--EEECCC-------E-EEcCEEEECcC--CCcC
Confidence 99999886 2 22 666553 4 99999999999 4444
No 229
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.05 E-value=2.3e-06 Score=82.65 Aligned_cols=105 Identities=21% Similarity=0.204 Sum_probs=72.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++++|||||+.|+.+|..|++.|.+|+++++...+.. ++. . ....+.+.+.+.+++++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~------~d~-------~--------~~~~l~~~l~~~Gv~i~ 245 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRG------FDQ-------Q--------MAELVAASMEERGIPFL 245 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTT------SCH-------H--------HHHHHHHHHHHTTCCEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcc------cCH-------H--------HHHHHHHHHHhCCCEEE
Confidence 56899999999999999999999999999998532210 000 0 00001122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
.+++|.+++...+ +...|++.++.+++ ..++.+|.||+|+| ..|+.
T Consensus 246 ~~~~v~~i~~~~~-~~~~v~~~~~~~~~--~~~~~~D~vi~a~G--~~p~~ 291 (483)
T 3dgh_A 246 RKTVPLSVEKQDD-GKLLVKYKNVETGE--ESEDVYDTVLWAIG--RKGLV 291 (483)
T ss_dssp ETEEEEEEEECTT-SCEEEEEEETTTCC--EEEEEESEEEECSC--EEECC
T ss_pred eCCEEEEEEEcCC-CcEEEEEecCCCCc--eeEEEcCEEEECcc--cccCc
Confidence 9999999987543 44567777754322 25799999999999 44443
No 230
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.05 E-value=1e-06 Score=84.41 Aligned_cols=100 Identities=13% Similarity=0.168 Sum_probs=68.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+...+ ++. . ....+.+.+.+.+++++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----~~~-------~--------~~~~l~~~l~~~Gv~i~ 209 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY----FDK-------E--------FTDILAKDYEAHGVNLV 209 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT----SCH-------H--------HHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh----hhh-------h--------HHHHHHHHHHHCCCEEE
Confidence 5789999999999999999999999999999987532100 000 0 00011122335689999
Q ss_pred ccceeEEEEEcCCCCcEE-EEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWR-IKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~-V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++|.+++..+ +... +++ ++ .++.+|.||+|+| ..|+.
T Consensus 210 ~~~~v~~i~~~~--~~v~~v~~-~g-------~~i~~D~vv~a~G--~~p~~ 249 (452)
T 2cdu_A 210 LGSKVAAFEEVD--DEIITKTL-DG-------KEIKSDIAILCIG--FRPNT 249 (452)
T ss_dssp ESSCEEEEEEET--TEEEEEET-TS-------CEEEESEEEECCC--EEECC
T ss_pred cCCeeEEEEcCC--CeEEEEEe-CC-------CEEECCEEEECcC--CCCCH
Confidence 999999998644 3322 322 22 4799999999999 44443
No 231
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.04 E-value=3.7e-06 Score=79.41 Aligned_cols=97 Identities=13% Similarity=0.204 Sum_probs=70.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.... .+ .. ....+.+.+.+.+++++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~----~~-------~~--------~~~~l~~~l~~~GV~i~ 203 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV----LG-------RR--------IGAWLRGLLTELGVQVE 203 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHH----HC-------HH--------HHHHHHHHHHHHTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhh----cC-------HH--------HHHHHHHHHHHCCCEEE
Confidence 5789999999999999999999999999999987532100 00 00 00011122335689999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
++++|.+++.++ +...|++.++ .++.+|.||+|+|.
T Consensus 204 ~~~~v~~i~~~~--~~~~v~~~dg-------~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 204 LGTGVVGFSGEG--QLEQVMASDG-------RSFVADSALICVGA 239 (410)
T ss_dssp CSCCEEEEECSS--SCCEEEETTS-------CEEECSEEEECSCE
T ss_pred eCCEEEEEeccC--cEEEEEECCC-------CEEEcCEEEEeeCC
Confidence 999999998754 4445777664 58999999999993
No 232
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.04 E-value=3e-06 Score=81.99 Aligned_cols=105 Identities=13% Similarity=0.033 Sum_probs=71.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++...+.. ++.- ....+.+.+.+.+++++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~------~d~~---------------~~~~l~~~l~~~gv~~~ 243 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG------FDQQ---------------MSSLVTEHMESHGTQFL 243 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT------SCHH---------------HHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc------CCHH---------------HHHHHHHHHHHCCCEEE
Confidence 56899999999999999999999999999998642210 0000 00001122335688999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
.+++|..+....+ +...|++.+..+++ ..++.+|.||+|+| ..|+.
T Consensus 244 ~~~~v~~i~~~~~-~~~~v~~~~~~~g~--~~~~~~D~vi~a~G--~~p~~ 289 (488)
T 3dgz_A 244 KGCVPSHIKKLPT-NQLQVTWEDHASGK--EDTGTFDTVLWAIG--RVPET 289 (488)
T ss_dssp ETEEEEEEEECTT-SCEEEEEEETTTTE--EEEEEESEEEECSC--EEESC
T ss_pred eCCEEEEEEEcCC-CcEEEEEEeCCCCe--eEEEECCEEEEccc--CCccc
Confidence 9999999987542 44557766643222 14689999999999 45543
No 233
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.03 E-value=1.4e-05 Score=75.96 Aligned_cols=98 Identities=16% Similarity=0.192 Sum_probs=68.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.... .+. .....+.+.+.+.+++++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~----~~~---------------~~~~~l~~~l~~~GV~i~ 209 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV----TAP---------------PVSAFYEHLHREAGVDIR 209 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----SCH---------------HHHHHHHHHHHHHTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch----hhH---------------HHHHHHHHHHHhCCeEEE
Confidence 5789999999999999999999999999999976432100 000 000001122335688999
Q ss_pred ccceeEEEEE--cCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 99 FNETVQSAKY--DETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 99 ~~~~V~~i~~--~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
++++|.+++. .+. +...|++.++ .++.+|.||+|+|.
T Consensus 210 ~~~~v~~i~~~~~~~-~v~~v~~~~G-------~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 210 TGTQVCGFEMSTDQQ-KVTAVLCEDG-------TRLPADLVIAGIGL 248 (431)
T ss_dssp CSCCEEEEEECTTTC-CEEEEEETTS-------CEEECSEEEECCCE
T ss_pred eCCEEEEEEeccCCC-cEEEEEeCCC-------CEEEcCEEEECCCC
Confidence 9999999986 331 3335666554 57999999999993
No 234
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.02 E-value=3.3e-06 Score=81.86 Aligned_cols=39 Identities=23% Similarity=0.370 Sum_probs=36.9
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLW 58 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w 58 (408)
+||+|||||++|++||..|++.|++|+|+|+.+.+||..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 689999999999999999999999999999999999843
No 235
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.01 E-value=2.6e-06 Score=81.03 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=31.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+++|+||||||+|+++|..|++.|++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3789999999999999999999999999999976
No 236
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.99 E-value=1.2e-05 Score=71.99 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=30.8
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|..|+.+|..|++.|.+|+++.+++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999765
No 237
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.98 E-value=4.5e-06 Score=76.09 Aligned_cols=99 Identities=10% Similarity=0.102 Sum_probs=69.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .. .+ ...+.++.+++++
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~~-------~~-----------~~~l~~~~gv~i~ 206 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA-------NK-------VA-----------QARAFANPKMKFI 206 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS-------CH-------HH-----------HHHHHTCTTEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc-------ch-------HH-----------HHHHHhcCCceEe
Confidence 46899999999999999999999999999998764320 00 00 0001122488999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeec-CCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISS-SDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~-~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++|+.+..+. +...|++.+. ++.. .++.+|.||+|+| ..|+.
T Consensus 207 ~~~~v~~i~~~~--~v~~v~~~~~~~g~~---~~i~~D~vi~a~G--~~p~~ 251 (325)
T 2q7v_A 207 WDTAVEEIQGAD--SVSGVKLRNLKTGEV---SELATDGVFIFIG--HVPNT 251 (325)
T ss_dssp CSEEEEEEEESS--SEEEEEEEETTTCCE---EEEECSEEEECSC--EEESC
T ss_pred cCCceEEEccCC--cEEEEEEEECCCCcE---EEEEcCEEEEccC--CCCCh
Confidence 999999998753 4334666542 2222 5799999999999 44443
No 238
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.98 E-value=5.2e-06 Score=79.00 Aligned_cols=42 Identities=10% Similarity=0.176 Sum_probs=38.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQN 60 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~ 60 (408)
.+||+|||||++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 469999999999999999999999999999999999997654
No 239
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.98 E-value=2.2e-06 Score=77.92 Aligned_cols=102 Identities=16% Similarity=0.159 Sum_probs=70.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .. .+ ...+.+.+.+.+++++
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~~-------~~--------~~~l~~~l~~~gv~i~ 202 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA-------EK-------IL--------IKRLMDKVENGNIILH 202 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC-------CH-------HH--------HHHHHHHHHTSSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc-------CH-------HH--------HHHHHHhcccCCeEEE
Confidence 46899999999999999999999999999998764310 00 00 0000111224588999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecC--CCCcceEEEEeCEEEEeeCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSS--DSSFCEVEYICRWLVVATGENAEKI 148 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~--~~~~~~~~i~ad~vViAtG~~~~~~ 148 (408)
++++|.++..+.+ +...|++.+.. +.. .++.+|.||+|+| ..|.
T Consensus 203 ~~~~v~~i~~~~~-~v~~v~~~~~~~~g~~---~~i~~D~vv~a~G--~~p~ 248 (320)
T 1trb_A 203 TNRTLEEVTGDQM-GVTGVRLRDTQNSDNI---ESLDVAGLFVAIG--HSPN 248 (320)
T ss_dssp CSCEEEEEEECSS-SEEEEEEECCTTCCCC---EEEECSEEEECSC--EEES
T ss_pred cCceeEEEEcCCC-ceEEEEEEeccCCCce---EEEEcCEEEEEeC--CCCC
Confidence 9999999987652 33336665421 222 6899999999999 4444
No 240
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.98 E-value=1.1e-05 Score=76.71 Aligned_cols=105 Identities=20% Similarity=0.299 Sum_probs=70.6
Q ss_pred CeEEEEccCCcHHHHHHHHhc--cCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhh
Q 035488 177 KRVLVVGCGNSGMEVSLDLCN--HNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVE 254 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~--~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 254 (408)
++|+|||+|..|+.+|..|++ .+.+|+++.+++...... .+........ .
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~--------~~~~~~~g~~--------------------~ 54 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP--------AFPHLAMGWR--------------------K 54 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG--------GHHHHHHTCS--------------------C
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC--------CcchhccCcc--------------------C
Confidence 689999999999999999999 678999999987322110 0000000000 0
Q ss_pred hcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC-ccEEeCC--eEEEecCcEEccCEEEEcCCCCCCCC
Q 035488 255 KYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG-IKKFSPG--KVELVNGQVLEIDSVVLATGYRSNVP 329 (408)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 329 (408)
. ..+...+.+.+++.+++++.+ +..++.+ .+.+.+++++.+|.+|+|||.+|+.+
T Consensus 55 ~--------------------~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 55 F--------------------EDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp G--------------------GGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECC
T ss_pred H--------------------HHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccccC
Confidence 0 001111223445568888877 7777765 47788888999999999999998764
No 241
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.97 E-value=1.9e-06 Score=82.77 Aligned_cols=100 Identities=17% Similarity=0.177 Sum_probs=70.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++++|||+|+.|+.+|..+++.|.+|+++++.+.+... ++. . ....+.+.+.+.+++++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~-----~~~-------~--------~~~~l~~~l~~~Gv~i~ 229 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR-----FDQ-------D--------MRRGLHAAMEEKGIRIL 229 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----SCH-------H--------HHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-----cCH-------H--------HHHHHHHHHHHCCCEEE
Confidence 578999999999999999999999999999998753210 000 0 00011112335689999
Q ss_pred ccceeEEEEEcCCCCcEEEE-EeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIK-TISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~-~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
.+++|.+++..++ +...|+ +.++ . +.+|.||+|+| ..|+.
T Consensus 230 ~~~~v~~i~~~~~-~~~~v~~~~~g-------~-i~aD~Vv~a~G--~~p~~ 270 (463)
T 4dna_A 230 CEDIIQSVSADAD-GRRVATTMKHG-------E-IVADQVMLALG--RMPNT 270 (463)
T ss_dssp CSCCEEEEEECTT-SCEEEEESSSC-------E-EEESEEEECSC--EEESC
T ss_pred CCCEEEEEEEcCC-CEEEEEEcCCC-------e-EEeCEEEEeeC--cccCC
Confidence 9999999987643 334566 5543 4 99999999999 44443
No 242
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.97 E-value=9.1e-06 Score=73.46 Aligned_cols=99 Identities=15% Similarity=0.089 Sum_probs=69.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCc-cCccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQ-FDINP 97 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 97 (408)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+. .+. .+.+.+.+ .++++
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~~~-------------------~~~~~l~~~~gv~v 197 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-------ADQ-------------------VLQDKLRSLKNVDI 197 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-------SCH-------------------HHHHHHHTCTTEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-------ccH-------------------HHHHHHhhCCCeEE
Confidence 4689999999999999999999999999999887531 000 00011112 48899
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKI 148 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~ 148 (408)
+.+++|..+..+.. +...|++.+...++ ..++.+|.||+|+| ..|+
T Consensus 198 ~~~~~v~~i~~~~~-~v~~v~~~~~~~g~--~~~i~~D~vi~a~G--~~p~ 243 (310)
T 1fl2_A 198 ILNAQTTEVKGDGS-KVVGLEYRDRVSGD--IHNIELAGIFVQIG--LLPN 243 (310)
T ss_dssp ESSEEEEEEEESSS-SEEEEEEEETTTCC--EEEEECSEEEECSC--EEES
T ss_pred ecCCceEEEEcCCC-cEEEEEEEECCCCc--EEEEEcCEEEEeeC--CccC
Confidence 99999999987541 22246666532222 25799999999999 4444
No 243
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.96 E-value=5.7e-06 Score=75.83 Aligned_cols=98 Identities=17% Similarity=0.138 Sum_probs=69.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCC-CCCCccCccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFP-RVPHQFDINP 97 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 97 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. .. . .+. ++..+.++++
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~-------~~-------~------------~~~~~~~~~~gV~v 208 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR-------AS-------K------------IMLDRARNNDKIRF 208 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS-------SC-------T------------THHHHHHHCTTEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC-------cc-------H------------HHHHHHhccCCcEE
Confidence 4689999999999999999999999999999876431 00 0 000 1122458899
Q ss_pred cccceeEEEEEcCCCCcEEEEEeec-CCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISS-SDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~-~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
+++++|..++.+. +...|++.+. ++.. .++.+|.||+|+| ..|..
T Consensus 209 ~~~~~v~~i~~~~--~~~~v~~~~~~~g~~---~~i~~D~vi~a~G--~~p~~ 254 (335)
T 2a87_A 209 LTNHTVVAVDGDT--TVTGLRVRDTNTGAE---TTLPVTGVFVAIG--HEPRS 254 (335)
T ss_dssp ECSEEEEEEECSS--SCCEEEEEEETTSCC---EEECCSCEEECSC--EEECC
T ss_pred EeCceeEEEecCC--cEeEEEEEEcCCCce---EEeecCEEEEccC--CccCh
Confidence 9999999998654 3333555542 2222 5899999999999 44443
No 244
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.95 E-value=4.9e-06 Score=80.51 Aligned_cols=100 Identities=21% Similarity=0.120 Sum_probs=68.6
Q ss_pred cCCcEEECCChHHHHHHHHHHH----cCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN----QGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFD 94 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~----~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (408)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+.+. ..+. .+ ...+.+.+.+.+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~----~l~~-------~~--------~~~~~~~l~~~G 240 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK----ILPE-------YL--------SNWTMEKVRREG 240 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT----TSCH-------HH--------HHHHHHHHHTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc----cCCH-------HH--------HHHHHHHHHhcC
Confidence 5689999999999999999987 47899999987532100 0000 00 000112233568
Q ss_pred ccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCC
Q 035488 95 INPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKI 148 (408)
Q Consensus 95 ~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~ 148 (408)
++++++++|.+++..+ +...|++.++ .++.+|.||+|+| ..|+
T Consensus 241 V~v~~~~~V~~i~~~~--~~~~v~l~dG-------~~i~aD~Vv~a~G--~~pn 283 (493)
T 1m6i_A 241 VKVMPNAIVQSVGVSS--GKLLIKLKDG-------RKVETDHIVAAVG--LEPN 283 (493)
T ss_dssp CEEECSCCEEEEEEET--TEEEEEETTS-------CEEEESEEEECCC--EEEC
T ss_pred CEEEeCCEEEEEEecC--CeEEEEECCC-------CEEECCEEEECCC--CCcc
Confidence 9999999999998654 4445666554 5899999999999 4444
No 245
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.95 E-value=5.7e-06 Score=76.65 Aligned_cols=103 Identities=19% Similarity=0.194 Sum_probs=69.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... +.. ...+.+...+.+++++
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~------~~~----------------~~~l~~~~~~~gv~i~ 220 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH------GKT----------------AHEVERARANGTIDVY 220 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC------SHH----------------HHSSHHHHHHTSEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC------HHH----------------HHHHHHHhhcCceEEE
Confidence 468999999999999999999999999999998653210 000 0011112224468899
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++|..++..+. +...|++...++.. ..+.+|.||+|+| ..|..
T Consensus 221 ~~~~v~~i~~~~~-~v~~v~~~~~~g~~---~~i~~D~vi~a~G--~~p~~ 265 (360)
T 3ab1_A 221 LETEVASIEESNG-VLTRVHLRSSDGSK---WTVEADRLLILIG--FKSNL 265 (360)
T ss_dssp SSEEEEEEEEETT-EEEEEEEEETTCCE---EEEECSEEEECCC--BCCSC
T ss_pred cCcCHHHhccCCC-ceEEEEEEecCCCe---EEEeCCEEEECCC--CCCCH
Confidence 9999999987641 22235554222222 5799999999999 44443
No 246
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.95 E-value=6.6e-06 Score=79.23 Aligned_cols=41 Identities=32% Similarity=0.518 Sum_probs=37.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCCccC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV-PFIILERANCIASLWQ 59 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~~~gg~w~ 59 (408)
.+||+|||||++|+++|..|++.|+ +|+|+|+.+.+||.+.
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~ 45 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMH 45 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCcee
Confidence 4689999999999999999999999 8999999999998654
No 247
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.94 E-value=8.6e-06 Score=74.67 Aligned_cols=37 Identities=30% Similarity=0.325 Sum_probs=33.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
|+||+|||||+||+.||..|++.|.+|+|+|+++...
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 4699999999999999999999999999999987543
No 248
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.93 E-value=8.8e-06 Score=74.42 Aligned_cols=96 Identities=18% Similarity=0.190 Sum_probs=69.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCC-CccCccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVP-HQFDINP 97 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 97 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. ...+.+.+ ++.++++
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~--------------------------~~~~~~~l~~~~gv~i 226 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA--------------------------STIMQKRAEKNEKIEI 226 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS--------------------------CHHHHHHHHHCTTEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC--------------------------CHHHHHHHHhcCCeEE
Confidence 46899999999999999999999999999999875321 00001111 1238899
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
+.+++|..++.... +...|++.+...++ ..++.+|.||+|+|.
T Consensus 227 ~~~~~v~~i~~~~~-~~~~v~~~~~~~g~--~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 227 LYNTVALEAKGDGK-LLNALRIKNTKKNE--ETDLPVSGLFYAIGH 269 (338)
T ss_dssp ECSEEEEEEEESSS-SEEEEEEEETTTTE--EEEEECSEEEECSCE
T ss_pred eecceeEEEEcccC-cEEEEEEEECCCCc--eEEEEeCEEEEEeCC
Confidence 99999999987652 33446776632221 157999999999993
No 249
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.93 E-value=5.1e-06 Score=80.61 Aligned_cols=40 Identities=33% Similarity=0.341 Sum_probs=37.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLW 58 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w 58 (408)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||.+
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 5789999999999999999999999999999999998854
No 250
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.92 E-value=7.1e-06 Score=79.95 Aligned_cols=106 Identities=16% Similarity=0.142 Sum_probs=68.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++...+.. ++.- ....+.+.+.+.+++++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~------~d~~---------------~~~~~~~~l~~~GV~v~ 268 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG------FDQD---------------MANKIGEHMEEHGIKFI 268 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT------SCHH---------------HHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccccc------CCHH---------------HHHHHHHHHHHCCCEEE
Confidence 56799999999999999999999999999998532210 0000 00001112335588999
Q ss_pred ccceeEEEEEcCC--CCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDET--FGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~--~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
.++++..+..... .+...++....++.+ ..++.+|.||+|+| ..|+.
T Consensus 269 ~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~--~~~~~~D~vi~a~G--~~p~~ 317 (519)
T 3qfa_A 269 RQFVPIKVEQIEAGTPGRLRVVAQSTNSEE--IIEGEYNTVMLAIG--RDACT 317 (519)
T ss_dssp ESEEEEEEEEEECCTTCEEEEEEEESSSSC--EEEEEESEEEECSC--EEESC
T ss_pred eCCeEEEEEEccCCCCceEEEEEEECCCcE--EEEEECCEEEEecC--CcccC
Confidence 9988888775431 133445554433322 14678999999999 45544
No 251
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.92 E-value=1.1e-05 Score=73.28 Aligned_cols=99 Identities=14% Similarity=0.120 Sum_probs=70.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .. . ...+..++.+++++
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~-------~~-------~-----------~~~~~~~~~gv~~~ 208 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA-------QP-------I-----------YVETVKKKPNVEFV 208 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-------CH-------H-----------HHHHHHTCTTEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-------CH-------H-----------HHHHHHhCCCcEEE
Confidence 46899999999999999999999999999999875421 00 0 00011123488999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKI 148 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~ 148 (408)
.+++|..++.+. +...|++.+...++ ..++.+|.||+|+| ..|.
T Consensus 209 ~~~~v~~i~~~~--~~~~v~~~~~~~g~--~~~~~~D~vv~a~G--~~p~ 252 (323)
T 3f8d_A 209 LNSVVKEIKGDK--VVKQVVVENLKTGE--IKELNVNGVFIEIG--FDPP 252 (323)
T ss_dssp CSEEEEEEEESS--SEEEEEEEETTTCC--EEEEECSEEEECCC--EECC
T ss_pred eCCEEEEEeccC--ceeEEEEEECCCCc--eEEEEcCEEEEEEC--CCCC
Confidence 999999998764 55557776622111 14799999999999 4444
No 252
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.91 E-value=8e-06 Score=73.89 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=68.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. ... .+. ..+.++.+++++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~~~-------~~~-----------~~l~~~~gv~v~ 197 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-------CAP-------ITL-----------EHAKNNDKIEFL 197 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-------SCH-------HHH-----------HHHHTCTTEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-------CCH-------HHH-----------HHHhhCCCeEEE
Confidence 4689999999999999999999999999999876432 000 000 001112488999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeec-CCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISS-SDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~-~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
+++++..+...++ +...|++.+. ++.+ .++.+|.||+|+| ..|..
T Consensus 198 ~~~~v~~i~~~~~-~v~~v~~~~~~~g~~---~~i~~D~vi~a~G--~~p~~ 243 (311)
T 2q0l_A 198 TPYVVEEIKGDAS-GVSSLSIKNTATNEK---RELVVPGFFIFVG--YDVNN 243 (311)
T ss_dssp TTEEEEEEEEETT-EEEEEEEEETTTCCE---EEEECSEEEECSC--EEECC
T ss_pred eCCEEEEEECCCC-cEeEEEEEecCCCce---EEEecCEEEEEec--CccCh
Confidence 9999999987631 2224666531 2222 4799999999999 44443
No 253
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.91 E-value=2.4e-06 Score=84.72 Aligned_cols=94 Identities=17% Similarity=0.291 Sum_probs=67.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ++. . ....+.+.+.+.+++++
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~~-------~--------~~~~l~~~l~~~GV~i~ 246 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-----IDY-------E--------MAAYVHEHMKNHDVELV 246 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----SCH-------H--------HHHHHHHHHHHTTCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-----CCH-------H--------HHHHHHHHHHHcCCEEE
Confidence 568999999999999999999999999999987753210 000 0 00011122335688999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
.+++|..++... +. |++.++ .++.+|.||+|+|.
T Consensus 247 ~~~~v~~i~~~~--~~--v~~~~g-------~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 247 FEDGVDALEENG--AV--VRLKSG-------SVIQTDMLILAIGV 280 (588)
T ss_dssp CSCCEEEEEGGG--TE--EEETTS-------CEEECSEEEECSCE
T ss_pred ECCeEEEEecCC--CE--EEECCC-------CEEEcCEEEEccCC
Confidence 999999998654 33 666554 58999999999993
No 254
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.90 E-value=4.9e-06 Score=76.18 Aligned_cols=102 Identities=11% Similarity=0.091 Sum_probs=70.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|..|+.+|..|++.|.+|+++++.+.+... +.. ...+.+.+.+.+++++
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~------~~~----------------~~~l~~~l~~~gv~v~ 209 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAH------EAS----------------VKELMKAHEEGRLEVL 209 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSC------HHH----------------HHHHHHHHHTTSSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCcc------HHH----------------HHHHHhccccCCeEEe
Confidence 468999999999999999999999999999998753210 000 0011112223488999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeec-CCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISS-SDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~-~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
.+++|..++.++ +...|++... ++.. .++.+|.||+|+| ..|..
T Consensus 210 ~~~~v~~i~~~~--~~~~v~~~~~~~g~~---~~i~~D~vi~a~G--~~p~~ 254 (335)
T 2zbw_A 210 TPYELRRVEGDE--RVRWAVVFHNQTQEE---LALEVDAVLILAG--YITKL 254 (335)
T ss_dssp TTEEEEEEEESS--SEEEEEEEETTTCCE---EEEECSEEEECCC--EEEEC
T ss_pred cCCcceeEccCC--CeeEEEEEECCCCce---EEEecCEEEEeec--CCCCc
Confidence 999999998743 4334666532 2222 5799999999999 44443
No 255
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.89 E-value=1.2e-05 Score=73.56 Aligned_cols=101 Identities=19% Similarity=0.190 Sum_probs=69.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. ... .+. .++..+.+++++
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-------~~~-------~~~-----------~~~~~~~gv~i~ 213 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-------ASK-------IMQ-----------QRALSNPKIDVI 213 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC-------SCH-------HHH-----------HHHHTCTTEEEE
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC-------ccH-------HHH-----------HHHHhCCCeeEe
Confidence 4689999999999999999999999999999987532 000 000 011224588999
Q ss_pred ccceeEEEEEcCCCCcE-EEEEeec-CCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFW-RIKTISS-SDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~-~V~~~~~-~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++|..+....+.... .|++.+. ++.. .++.+|.||+|+| ..|..
T Consensus 214 ~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~---~~i~~D~vi~a~G--~~p~~ 261 (333)
T 1vdc_A 214 WNSSVVEAYGDGERDVLGGLKVKNVVTGDV---SDLKVSGLFFAIG--HEPAT 261 (333)
T ss_dssp CSEEEEEEEESSSSSSEEEEEEEETTTCCE---EEEECSEEEECSC--EEESC
T ss_pred cCCceEEEeCCCCccceeeEEEEecCCCce---EEEecCEEEEEeC--Cccch
Confidence 99999999875421022 2566542 2222 5799999999999 44443
No 256
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.87 E-value=7.1e-06 Score=76.67 Aligned_cols=34 Identities=32% Similarity=0.483 Sum_probs=32.4
Q ss_pred CcEEECCChHHHHHHHHHHHc--CCCEEEEecCCCC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANCI 54 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~~ 54 (408)
||+|||||++|+++|..|++. |++|+|+|+.+.+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 799999999999999999999 9999999998766
No 257
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.87 E-value=9.6e-06 Score=77.30 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=38.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQ 59 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~ 59 (408)
.+||+|||+|.+|+++|..|++.|.+|+++|+++.+||.+.
T Consensus 20 ~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~ 60 (475)
T 3p1w_A 20 HYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETA 60 (475)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCcc
Confidence 57999999999999999999999999999999999998654
No 258
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.86 E-value=6.9e-06 Score=78.53 Aligned_cols=38 Identities=29% Similarity=0.271 Sum_probs=33.3
Q ss_pred cccCCcEEECCChHHHHHHHHHHHcC-CCEEEEecCCCC
Q 035488 17 IWVNGPVIVGAGPSGLAVAAGLKNQG-VPFIILERANCI 54 (408)
Q Consensus 17 ~~~~~vvIIG~G~aGl~~A~~l~~~g-~~v~lie~~~~~ 54 (408)
|..+||+|||||++|+++|.+|+++| .+|+|||+...+
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAP 59 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSST
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCC
Confidence 44579999999999999999999999 999999994333
No 259
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.86 E-value=8.2e-06 Score=74.15 Aligned_cols=95 Identities=15% Similarity=0.080 Sum_probs=67.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .. .+.+.+.+.+++++
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~-------~~-------------------~l~~~l~~~gv~i~ 208 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC-------EN-------------------AYVQEIKKRNIPYI 208 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS-------CH-------------------HHHHHHHHTTCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC-------CH-------------------HHHHHHhcCCcEEE
Confidence 46899999999999999999999999999998764320 00 01111224588999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeec-CCCCcceEEEEeCEEEEeeCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISS-SDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~-~~~~~~~~~i~ad~vViAtG~ 143 (408)
++++|+.+..++. +...|++.+. ++.. .++.+|.||+|+|.
T Consensus 209 ~~~~v~~i~~~~~-~v~~v~~~~~~~g~~---~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 209 MNAQVTEIVGDGK-KVTGVKYKDRTTGEE---KLIETDGVFIYVGL 250 (319)
T ss_dssp CSEEEEEEEESSS-SEEEEEEEETTTCCE---EEECCSEEEECCCE
T ss_pred cCCeEEEEecCCc-eEEEEEEEEcCCCce---EEEecCEEEEeeCC
Confidence 9999999987641 2334666531 2222 47999999999993
No 260
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.86 E-value=3.7e-05 Score=75.07 Aligned_cols=35 Identities=29% Similarity=0.395 Sum_probs=31.8
Q ss_pred cCCcEEECCChHHHHHHHHHHH-cCCCEEEEecCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN-QGVPFIILERANC 53 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~-~g~~v~lie~~~~ 53 (408)
.+|+||||||+||+.+|.+|++ .+++|+|+|+.+.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 4799999999999999999998 5789999999854
No 261
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.85 E-value=3.4e-05 Score=74.04 Aligned_cols=85 Identities=12% Similarity=0.062 Sum_probs=60.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|.+|+.+|..|++.|.+|+++++.+.+.+. .++ .++.++
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~-----------------------~~~---------~~V~~~ 244 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGY-----------------------KWP---------ENWDER 244 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCC-----------------------CCC---------TTEEEC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCC-----------------------CCC---------CceEEc
Confidence 578999999999999999999999999999987643100 000 144443
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPEF 152 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~~ 152 (408)
..|..++ . +. |++.++ .++.+|.||+||| ..|..|-+
T Consensus 245 --~~V~~i~--~--~~--V~~~dG-------~~i~~D~Vi~atG--~~p~~~~l 281 (464)
T 2xve_A 245 --PNLVRVD--T--EN--AYFADG-------SSEKVDAIILCTG--YIHHFPFL 281 (464)
T ss_dssp --SCEEEEC--S--SE--EEETTS-------CEEECSEEEECCC--BCCCCTTB
T ss_pred --CCeEEEe--C--CE--EEECCC-------CEEeCCEEEECCC--CCCCCCCc
Confidence 5666664 2 22 677664 4789999999999 55655543
No 262
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.84 E-value=1.3e-05 Score=74.38 Aligned_cols=34 Identities=32% Similarity=0.408 Sum_probs=32.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+||+|||||++|+++|++|++.|++|+|+|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 3699999999999999999999999999999975
No 263
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.84 E-value=8.8e-06 Score=79.49 Aligned_cols=34 Identities=24% Similarity=0.432 Sum_probs=31.9
Q ss_pred cCCcEEECCChHHHHHHHHHHH------------cCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN------------QGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~------------~g~~v~lie~~~ 52 (408)
.+||+|||||++|+++|..|++ .|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 4689999999999999999999 899999999875
No 264
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.84 E-value=1.1e-05 Score=73.54 Aligned_cols=99 Identities=13% Similarity=0.001 Sum_probs=72.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+... .. ....+.+.+++++
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~------~~--------------------~~~~l~~~gv~~~ 207 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH------EH--------------------SVENLHASKVNVL 207 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC------HH--------------------HHHHHHHSSCEEE
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc------HH--------------------HHHHHhcCCeEEE
Confidence 468999999999999999999999999999998753210 00 0011234588999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
.+++|..+.... +...|++.+..+++ ..++.+|.||+|+| ..|..
T Consensus 208 ~~~~v~~i~~~~--~~~~v~~~~~~~g~--~~~~~~D~vv~a~G--~~p~~ 252 (332)
T 3lzw_A 208 TPFVPAELIGED--KIEQLVLEEVKGDR--KEILEIDDLIVNYG--FVSSL 252 (332)
T ss_dssp TTEEEEEEECSS--SCCEEEEEETTSCC--EEEEECSEEEECCC--EECCC
T ss_pred eCceeeEEecCC--ceEEEEEEecCCCc--eEEEECCEEEEeec--cCCCc
Confidence 999999998765 34457777643322 26799999999999 44443
No 265
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.84 E-value=6.4e-06 Score=78.81 Aligned_cols=95 Identities=21% Similarity=0.338 Sum_probs=64.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+...+ ++.- ....+.+.+.+. ++++
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----~~~~---------------~~~~l~~~l~~~-v~i~ 207 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS----FDKE---------------VTDILEEKLKKH-VNLR 207 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----SCHH---------------HHHHHHHHHTTT-SEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh----cCHH---------------HHHHHHHHHHhC-cEEE
Confidence 4589999999999999999999999999999987542110 0000 000011122234 7888
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGE 143 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~ 143 (408)
+++.|..++... +...+ ..++ .++.+|.||+|+|.
T Consensus 208 ~~~~v~~i~~~~--~v~~v-~~~g-------~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 208 LQEITMKIEGEE--RVEKV-VTDA-------GEYKAELVILATGI 242 (449)
T ss_dssp ESCCEEEEECSS--SCCEE-EETT-------EEEECSEEEECSCE
T ss_pred eCCeEEEEeccC--cEEEE-EeCC-------CEEECCEEEEeeCC
Confidence 889999987654 22223 2332 68999999999993
No 266
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.83 E-value=4.8e-05 Score=73.03 Aligned_cols=103 Identities=23% Similarity=0.279 Sum_probs=68.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCC-CccCccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVP-HQFDINP 97 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 97 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+...+ .+. ++.+.+ +.+.+++
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~----~d~-------------------~~~~~l~~~l~v~i 228 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL----EDQ-------------------DIVNTLLSILKLNI 228 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS----CCH-------------------HHHHHHHHHHCCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC----CCH-------------------HHHHHHHhcCEEEE
Confidence 5689999999999999999999999999999987532110 000 000000 1123677
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEP 150 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p 150 (408)
+.+++|.+++.... +...|++.+.++.+ .++.+|.||+|+| ..|+..
T Consensus 229 ~~~~~v~~i~~~~~-~~v~v~~~~~~G~~---~~i~~D~vi~a~G--~~p~~~ 275 (466)
T 3l8k_A 229 KFNSPVTEVKKIKD-DEYEVIYSTKDGSK---KSIFTNSVVLAAG--RRPVIP 275 (466)
T ss_dssp ECSCCEEEEEEEET-TEEEEEECCTTSCC---EEEEESCEEECCC--EEECCC
T ss_pred EECCEEEEEEEcCC-CcEEEEEEecCCce---EEEEcCEEEECcC--CCcccc
Confidence 88899999986541 23446665312222 5899999999999 555443
No 267
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.82 E-value=5.2e-05 Score=72.37 Aligned_cols=84 Identities=11% Similarity=-0.058 Sum_probs=59.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCC-EEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVP-FIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINP 97 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~-v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
.++|+|||+|++|+.+|..|++.+.+ |+++++.+.+ +...++.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~-----------------------------------l~~~~i~- 255 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD-----------------------------------IQNESLQ- 255 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS-----------------------------------CBCSSEE-
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc-----------------------------------CCCCCeE-
Confidence 57899999999999999999999998 9999987632 0011332
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCCC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEPE 151 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p~ 151 (408)
....|..+.... .. |++.++ +..+.+|.||+||| ..|..|-
T Consensus 256 -~~~~v~~~~~~~--~~--v~~~dG------~~~~~~D~vi~atG--~~~~~~~ 296 (447)
T 2gv8_A 256 -QVPEITKFDPTT--RE--IYLKGG------KVLSNIDRVIYCTG--YLYSVPF 296 (447)
T ss_dssp -EECCEEEEETTT--TE--EEETTT------EEECCCSEEEECCC--BCCCCCC
T ss_pred -EecCeEEEecCC--CE--EEECCC------CEeccCCEEEECCC--CCcCCCC
Confidence 345676665332 33 777654 13478999999999 5555544
No 268
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.79 E-value=3.6e-05 Score=74.51 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=33.6
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecCcee
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHV 212 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~ 212 (408)
..++|+|||+|..|+.+|..|.+.+.+|+++.+++.+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~ 78 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFL 78 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcc
Confidence 34589999999999999999999999999999988443
No 269
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.79 E-value=7.1e-06 Score=74.24 Aligned_cols=100 Identities=15% Similarity=0.124 Sum_probs=69.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+.. .. . ...+..++.+++++
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~-------~~-------~-----------~~~~~~~~~gv~~~ 201 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA-------AP-------S-----------TVEKVKKNEKIELI 201 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS-------CH-------H-----------HHHHHHHCTTEEEE
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC-------CH-------H-----------HHHHHHhcCCeEEE
Confidence 46899999999999999999999999999999875310 00 0 00011124588999
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++|..+..... +...|++...++.. .++.+|.||+|+| ..|..
T Consensus 202 ~~~~v~~i~~~~~-~~~~v~~~~~~g~~---~~~~~D~vv~a~G--~~p~~ 246 (315)
T 3r9u_A 202 TSASVDEVYGDKM-GVAGVKVKLKDGSI---RDLNVPGIFTFVG--LNVRN 246 (315)
T ss_dssp CSCEEEEEEEETT-EEEEEEEECTTSCE---EEECCSCEEECSC--EEECC
T ss_pred eCcEEEEEEcCCC-cEEEEEEEcCCCCe---EEeecCeEEEEEc--CCCCc
Confidence 9999999987652 22335555222222 5899999999999 44443
No 270
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.78 E-value=1.6e-05 Score=81.36 Aligned_cols=39 Identities=31% Similarity=0.497 Sum_probs=36.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASL 57 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~ 57 (408)
.++|+|||||++|+++|..|++.|++|+|+|+.+.+||.
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 316 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCc
Confidence 578999999999999999999999999999999988874
No 271
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.77 E-value=2.6e-05 Score=72.32 Aligned_cols=104 Identities=19% Similarity=0.238 Sum_probs=65.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCC----CCCCCCCccC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPE----DFPRVPHQFD 94 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 94 (408)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .++ +....+. .+.+.+.+.+
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~----~~d-------------~~~~~~~~~~~~l~~~l~~~g 228 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP----DAD-------------PSVRLSPYTRQRLGNVIKQGA 228 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC---------------------------CTTSCCHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC----CCC-------------CCccCCHHHHHHHHHHHhhCC
Confidence 358999999999999999999999999999997643200 000 0000000 0011122444
Q ss_pred -ccccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 95 -INPRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 95 -~~~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
++++.+++|..++... +.+.|++.++. ....+|.||+|+| ..|..
T Consensus 229 ~v~~~~~~~v~~i~~~~--~~~~v~~~~g~------~~~~~d~vi~a~G--~~~~~ 274 (369)
T 3d1c_A 229 RIEMNVHYTVKDIDFNN--GQYHISFDSGQ------SVHTPHEPILATG--FDATK 274 (369)
T ss_dssp CEEEECSCCEEEEEEET--TEEEEEESSSC------CEEESSCCEECCC--BCGGG
T ss_pred cEEEecCcEEEEEEecC--CceEEEecCCe------EeccCCceEEeec--cCCcc
Confidence 8889999999997655 45557766541 2334699999999 55554
No 272
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.76 E-value=1.5e-05 Score=79.15 Aligned_cols=105 Identities=16% Similarity=0.126 Sum_probs=65.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++...+.+ ++.- ....+.+.+.+.+++++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~------~d~~---------------~~~~~~~~l~~~gv~i~ 344 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSILLRG------FDQQ---------------MAEKVGDYMENHGVKFA 344 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT------SCHH---------------HHHHHHHHHHHTTCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCcCc------CCHH---------------HHHHHHHHHHhCCCEEE
Confidence 46899999999999999999999999999998632110 0000 00001112234588899
Q ss_pred ccceeEEEEEc-----C--CCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCC
Q 035488 99 FNETVQSAKYD-----E--TFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIE 149 (408)
Q Consensus 99 ~~~~V~~i~~~-----~--~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~ 149 (408)
+++.+..+... . ..+...++....++.+ ..+.+|.||+|+| .+|+.
T Consensus 345 ~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~---~~~~~D~vi~a~G--~~p~~ 397 (598)
T 2x8g_A 345 KLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKK---FEEEFETVIFAVG--REPQL 397 (598)
T ss_dssp ETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCE---EEEEESEEEECSC--EEECG
T ss_pred ECCeEEEEEeccccccccCCCceEEEEEEeCCCcE---EeccCCEEEEEeC--Ccccc
Confidence 98888887643 1 1133334433222222 3456999999999 44443
No 273
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.75 E-value=1.6e-05 Score=79.75 Aligned_cols=41 Identities=29% Similarity=0.451 Sum_probs=37.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQ 59 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~ 59 (408)
.++|+|||||++|+++|..|++.|++|+|+|+.+.+||.+.
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~ 147 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 147 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCC
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 57999999999999999999999999999999999988543
No 274
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.74 E-value=1.2e-05 Score=78.37 Aligned_cols=34 Identities=32% Similarity=0.524 Sum_probs=30.6
Q ss_pred cCCcEEECCChHHHHHHHHHHH---cCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN---QGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~---~g~~v~lie~~~ 52 (408)
++||+|||||++|+++|..|++ .|++|+|||+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 4689999999999999999999 999999999975
No 275
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.74 E-value=1.8e-05 Score=77.67 Aligned_cols=34 Identities=24% Similarity=0.416 Sum_probs=32.1
Q ss_pred cCCcEEECCChHHHHHHHHHHH---cCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN---QGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~---~g~~v~lie~~~ 52 (408)
.+||+|||||++|+++|..|++ .|++|+|||+.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 5799999999999999999999 999999999975
No 276
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.73 E-value=2.8e-05 Score=71.56 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=31.0
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|..|+.+|..|++.|.+|+++.+++
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~ 36 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEA 36 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999876
No 277
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.73 E-value=3.3e-05 Score=72.84 Aligned_cols=34 Identities=15% Similarity=0.409 Sum_probs=31.3
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..+|+|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~ 60 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHAR 60 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4579999999999999999999999999999877
No 278
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.71 E-value=2e-05 Score=78.24 Aligned_cols=40 Identities=28% Similarity=0.349 Sum_probs=36.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLW 58 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w 58 (408)
.+||+|||||++|+++|..|++.|++|+|||+.+..+|.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 4799999999999999999999999999999998877644
No 279
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.70 E-value=1.4e-05 Score=73.65 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=31.1
Q ss_pred CcEEECCChHHHHHHHHHHHcC------CCEEEEecCCC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQG------VPFIILERANC 53 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~g------~~v~lie~~~~ 53 (408)
||+|||||++|+++|.+|++.| .+|+|+|+...
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 7999999999999999999998 89999999863
No 280
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.70 E-value=0.00013 Score=65.74 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=29.8
Q ss_pred eEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.|+|||+|+.|+.+|..+++.|.+|+++.+..
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 69999999999999999999999999998764
No 281
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.68 E-value=5.6e-05 Score=73.62 Aligned_cols=95 Identities=16% Similarity=0.135 Sum_probs=67.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCc-cCccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQ-FDINP 97 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 97 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. +. .+.+.+.+ .++++
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~-------~~-------------------~l~~~l~~~~gV~v 408 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA-------DQ-------------------VLQDKVRSLKNVDI 408 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS-------CH-------------------HHHHHHTTCTTEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc-------CH-------------------HHHHHHhcCCCcEE
Confidence 46899999999999999999999999999998765320 00 00001112 38899
Q ss_pred cccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeC
Q 035488 98 RFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATG 142 (408)
Q Consensus 98 ~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG 142 (408)
+.+++++.+..+.. +...|++.+...++ ..++.+|.|++|+|
T Consensus 409 ~~~~~v~~i~~~~~-~v~~v~~~~~~~g~--~~~i~~D~vi~a~G 450 (521)
T 1hyu_A 409 ILNAQTTEVKGDGS-KVVGLEYRDRVSGD--IHSVALAGIFVQIG 450 (521)
T ss_dssp ECSEEEEEEEECSS-SEEEEEEEETTTCC--EEEEECSEEEECCC
T ss_pred EeCCEEEEEEcCCC-cEEEEEEEeCCCCc--eEEEEcCEEEECcC
Confidence 99999999986541 32246666532222 25799999999999
No 282
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.65 E-value=6.5e-05 Score=72.66 Aligned_cols=35 Identities=26% Similarity=0.472 Sum_probs=32.7
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
...+|+|||+|.+|+.+|..|++.|.+|+++.+++
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~ 125 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRI 125 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEecc
Confidence 46789999999999999999999999999999886
No 283
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.64 E-value=2.9e-05 Score=77.45 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=33.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCI 54 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~ 54 (408)
.+||||||||.+|++||..|++.|.+|+|+||....
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 469999999999999999999999999999998754
No 284
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.63 E-value=4.6e-05 Score=68.90 Aligned_cols=102 Identities=19% Similarity=0.128 Sum_probs=62.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcccc
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPR 98 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.... ... .........+....
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~-------~~~------------------~~~~~~~~~~~~~~ 206 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA-------SKT------------------MQERVLNHPKIEVI 206 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHH------------------HHHHHHTCTTEEEE
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc-------cch------------------hhhhhhcccceeeE
Confidence 46899999999999999999999999999998653210 000 00000011234444
Q ss_pred ccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeCCCCCCCCC
Q 035488 99 FNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATGENAEKIEP 150 (408)
Q Consensus 99 ~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG~~~~~~~p 150 (408)
..+.+..+..... ..-.+...+....+ ..++.+|.|++|+| ..|+..
T Consensus 207 ~~~~~~~i~~~~~-~~~~~~~~~~~~~~--~~~i~~d~vi~a~G--~~pn~~ 253 (314)
T 4a5l_A 207 WNSELVELEGDGD-LLNGAKIHNLVSGE--YKVVPVAGLFYAIG--HSPNSK 253 (314)
T ss_dssp CSEEEEEEEESSS-SEEEEEEEETTTCC--EEEEECSEEEECSC--EEESCG
T ss_pred eeeeeEEEEeeee-ccceeEEeeccccc--ceeeccccceEecc--cccChh
Confidence 5556666654432 22223443322222 26899999999999 555543
No 285
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.57 E-value=0.00014 Score=68.27 Aligned_cols=33 Identities=12% Similarity=0.314 Sum_probs=31.0
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-+|+|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~ 37 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGK 37 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 369999999999999999999999999999876
No 286
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.56 E-value=9.1e-05 Score=72.10 Aligned_cols=35 Identities=29% Similarity=0.445 Sum_probs=32.4
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
...+|+|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 34689999999999999999999999999999886
No 287
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.53 E-value=6.3e-05 Score=75.05 Aligned_cols=37 Identities=14% Similarity=0.169 Sum_probs=33.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHc------CCCEEEEecCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ------GVPFIILERANCIA 55 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~------g~~v~lie~~~~~g 55 (408)
.+||||||||+||++||..|++. |.+|+|+||....+
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~ 64 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLER 64 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCC
Confidence 57999999999999999999998 99999999976433
No 288
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.53 E-value=0.00011 Score=66.47 Aligned_cols=32 Identities=25% Similarity=0.468 Sum_probs=29.8
Q ss_pred eEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.|+|||+|+.|+.+|..|++.|.+|+++.+..
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 69999999999999999999999999998754
No 289
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.53 E-value=0.00025 Score=64.43 Aligned_cols=33 Identities=18% Similarity=0.424 Sum_probs=30.6
Q ss_pred CeEEEEccCCcHHHHHHHHhcc--CCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNH--NAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~--g~~V~~~~r~~ 209 (408)
-+|+|||+|.+|+-+|..|++. |.+|+++.+.+
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 4799999999999999999997 99999999876
No 290
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.52 E-value=0.00018 Score=67.03 Aligned_cols=137 Identities=19% Similarity=0.165 Sum_probs=74.2
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeecccccCCchHHHHHHHHhhcchHHHHHHHHHHHHHHhhhhhh
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVLGKSTFQLAVLMMKYFPLWLVDKILLILARLILGNVEK 255 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (408)
..+|+|||+|.+|+.+|..|++.|.+|+++.+++. ..+ ...+..-......+...+.. .. .+..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~-~~~-~~~~~~l~~~~~~~l~~~g~------~~--------~~~~ 74 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSE-LRA-FGAGIYLWHNGLRVLEGLGA------LD--------DVLQ 74 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-CCC-CSSEEEEEHHHHHHHHHTTC------HH--------HHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCC-CCceEEeCccHHHHHHHcCC------HH--------HHHh
Confidence 46899999999999999999999999999998762 211 00000000011111111100 00 0011
Q ss_pred cCCCCCCC-----CCcc--cc-----cCCCCCcccChhhhhhhccCCeEEecC--ccEEeCC-eEEEecCcEEccCEEEE
Q 035488 256 YGLKRPPT-----GPIE--LK-----NNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFSPG-KVELVNGQVLEIDSVVL 320 (408)
Q Consensus 256 ~~~~~~~~-----~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~~~-~v~~~~g~~~~~D~vi~ 320 (408)
.+...... +... +. .....+..+...+.+.+.+.+++++.+ +++++.+ .|.+.+|+++.+|.||.
T Consensus 75 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~ 154 (379)
T 3alj_A 75 GSHTPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVG 154 (379)
T ss_dssp TCBCCSCEEEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEE
T ss_pred hCCCccceEEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEE
Confidence 11100000 0000 00 000001122334455566678888876 6666532 57778888999999999
Q ss_pred cCCCCCCC
Q 035488 321 ATGYRSNV 328 (408)
Q Consensus 321 atG~~~~~ 328 (408)
|+|..+..
T Consensus 155 AdG~~s~v 162 (379)
T 3alj_A 155 ADGVGSKV 162 (379)
T ss_dssp CCCTTCHH
T ss_pred CCCccHHH
Confidence 99998754
No 291
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.42 E-value=0.00011 Score=70.16 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=31.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCC-EEEEecCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVP-FIILERANC 53 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~-v~lie~~~~ 53 (408)
.++|+|||||..|+.+|..+.+.|.+ |+++++.+.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 56899999999999999999999985 999998764
No 292
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.39 E-value=9e-05 Score=74.74 Aligned_cols=97 Identities=16% Similarity=0.075 Sum_probs=65.7
Q ss_pred cCCcEEEC--CChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcc
Q 035488 19 VNGPVIVG--AGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDIN 96 (408)
Q Consensus 19 ~~~vvIIG--~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (408)
.++|+||| +|+.|+.+|..|++.|.+|+++++.+.+....... .....+.+.+.+.+++
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~-------------------~~~~~l~~~l~~~GV~ 583 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNT-------------------FEVNRIQRRLIENGVA 583 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGG-------------------TCHHHHHHHHHHTTCE
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccc-------------------hhHHHHHHHHHHCCCE
Confidence 45699999 99999999999999999999999987543211000 0000111233356899
Q ss_pred ccccceeEEEEEcCCCCcEEEEEeecCCCCcceEEEEeCEEEEeeC
Q 035488 97 PRFNETVQSAKYDETFGFWRIKTISSSDSSFCEVEYICRWLVVATG 142 (408)
Q Consensus 97 ~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~~~~~~i~ad~vViAtG 142 (408)
++.+++|++++.+. ..++.... +. ..++.+|.||+|+|
T Consensus 584 i~~~~~V~~i~~~~----~~v~~~~~-~~---~~~i~aD~VV~A~G 621 (690)
T 3k30_A 584 RVTDHAVVAVGAGG----VTVRDTYA-SI---ERELECDAVVMVTA 621 (690)
T ss_dssp EEESEEEEEEETTE----EEEEETTT-CC---EEEEECSEEEEESC
T ss_pred EEcCcEEEEEECCe----EEEEEccC-Ce---EEEEECCEEEECCC
Confidence 99999999997433 12332211 11 15899999999999
No 293
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.38 E-value=0.00026 Score=67.52 Aligned_cols=148 Identities=21% Similarity=0.314 Sum_probs=75.2
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecCceeeccc-cc--CC---ch-HHHHHHHHhhcch---HHHHHHHHHHH
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPRE-VL--GK---ST-FQLAVLMMKYFPL---WLVDKILLILA 246 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~~~~~p~~-~~--~~---~~-~~~~~~~~~~l~~---~~~~~~~~~~~ 246 (408)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+. ..... .. +. .. .... .+...++. .....+.....
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~-~g~~~~~sg~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK-LGRKLAISGGGRCNVTNRLPLD-EIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS-SCHHHHHTGGGTCCCEECSCHH-HHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCC-CCceeEEeCCCceeccCcccHH-HHHHHhccChHHHHHHHHhcCH
Confidence 4799999999999999999999999999998762 11000 00 00 00 0000 11111110 00000000000
Q ss_pred HHHhhhhhhcCCCCCCCCCcccccCCCCCcccChhhhhhhccCCeEEecC--ccEEe--CCe---EEEecCcEEccCEEE
Q 035488 247 RLILGNVEKYGLKRPPTGPIELKNNEGKTPVLDIGALQKIRSGDIKVVPG--IKKFS--PGK---VELVNGQVLEIDSVV 319 (408)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--i~~~~--~~~---v~~~~g~~~~~D~vi 319 (408)
.....-+...|+.........+.........+...+.+.+++.+++++.+ +.++. ++. |.+.+|+.+.+|.||
T Consensus 105 ~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VV 184 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVV 184 (447)
T ss_dssp HHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEE
T ss_pred HHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEE
Confidence 00000112233321000000000001111233344566666788999876 66664 333 666788789999999
Q ss_pred EcCCCCC
Q 035488 320 LATGYRS 326 (408)
Q Consensus 320 ~atG~~~ 326 (408)
+|+|..+
T Consensus 185 lAtGg~s 191 (447)
T 2i0z_A 185 IAVGGKS 191 (447)
T ss_dssp ECCCCSS
T ss_pred ECCCCCc
Confidence 9999887
No 294
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.38 E-value=0.00011 Score=76.87 Aligned_cols=95 Identities=13% Similarity=0.106 Sum_probs=68.9
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCccccc
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDINPRF 99 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (408)
++|+|||+|+.|+.+|..|++.|.+|+|+++.+.+.. . .+.+.+.+++++.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~-------------------~----------~~~l~~~GV~v~~ 335 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA-------------------A----------AAQAVADGVQVIS 335 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH-------------------H----------HHHHHHTTCCEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch-------------------h----------HHHHHhCCeEEEe
Confidence 6899999999999999999999999999999875320 0 1123355899999
Q ss_pred cceeEEEEEcCCCCcEEEEEee--c---CCCCcceEEEEeCEEEEeeCCCCCCC
Q 035488 100 NETVQSAKYDETFGFWRIKTIS--S---SDSSFCEVEYICRWLVVATGENAEKI 148 (408)
Q Consensus 100 ~~~V~~i~~~~~~~~~~V~~~~--~---~~~~~~~~~i~ad~vViAtG~~~~~~ 148 (408)
++.|..+....+.+...|++.+ . ++.. .++.+|.||+|+| ..|+
T Consensus 336 ~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~---~~i~~D~Vv~a~G--~~P~ 384 (965)
T 2gag_A 336 GSVVVDTEADENGELSAIVVAELDEARELGGT---QRFEADVLAVAGG--FNPV 384 (965)
T ss_dssp TEEEEEEEECTTSCEEEEEEEEECTTCCEEEE---EEEECSEEEEECC--EEEC
T ss_pred CCEeEEEeccCCCCEEEEEEEeccccCCCCce---EEEEcCEEEECCC--cCcC
Confidence 9999999873111333455554 1 0111 5799999999999 4544
No 295
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.30 E-value=6.3e-05 Score=75.02 Aligned_cols=36 Identities=25% Similarity=0.298 Sum_probs=33.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcC--------CCEEEEecCC-CC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQG--------VPFIILERAN-CI 54 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g--------~~v~lie~~~-~~ 54 (408)
.++|+|||||++|++||..|++.| ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999998 9999999998 88
No 296
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.26 E-value=0.00017 Score=70.74 Aligned_cols=34 Identities=38% Similarity=0.645 Sum_probs=32.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+|++|||+|++|+.+|.+|++.|++|+|+|+..
T Consensus 7 ~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 7 PYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred ceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 4699999999999999999999999999999986
No 297
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.26 E-value=0.00066 Score=66.32 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=31.4
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..+|+|||+|.+|+.+|..|.+.|.+|+++.+++
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~ 42 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGE 42 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3579999999999999999999999999999876
No 298
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.22 E-value=0.00033 Score=69.02 Aligned_cols=45 Identities=13% Similarity=0.311 Sum_probs=41.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTY 63 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~ 63 (408)
.+||+|||+|..|..+|..|++.|.+|++||++++.||.|....+
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l 52 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSF 52 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccH
Confidence 589999999999999999999999999999999999998875433
No 299
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.20 E-value=0.00045 Score=67.52 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=31.3
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..+|+|||+|.+|+.+|..|.+.|.+|+++.+++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 54 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAAS 54 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3579999999999999999999999999999865
No 300
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.19 E-value=0.00055 Score=66.76 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=30.8
Q ss_pred CeEEEEccCCcHHHHHHHHh-ccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLC-NHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~-~~g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+.+|..|. +.|.+|+++.+++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~ 42 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKAD 42 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 47999999999999999999 8999999999865
No 301
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.16 E-value=0.00037 Score=62.85 Aligned_cols=32 Identities=25% Similarity=0.517 Sum_probs=30.2
Q ss_pred eEEEEccCCcHHHHHHHHhcc--CCccEEEEecC
Q 035488 178 RVLVVGCGNSGMEVSLDLCNH--NAKPSMVVRSS 209 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~--g~~V~~~~r~~ 209 (408)
+|+|||+|.+|+-+|..|++. |.+|+++.+.+
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 799999999999999999998 99999999876
No 302
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.15 E-value=0.0015 Score=61.01 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=31.2
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999876
No 303
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.15 E-value=0.00016 Score=70.60 Aligned_cols=35 Identities=37% Similarity=0.478 Sum_probs=32.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCI 54 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~ 54 (408)
.+|++|||||+||+.+|.+|++ |.+|+|+|+.+..
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 4899999999999999999999 9999999998643
No 304
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.14 E-value=0.00071 Score=63.32 Aligned_cols=34 Identities=29% Similarity=0.369 Sum_probs=32.0
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..+|+|||+|.+|+.+|..|++.|.+|+++.+++
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 38 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP 38 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4689999999999999999999999999999887
No 305
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.12 E-value=0.00023 Score=69.79 Aligned_cols=35 Identities=34% Similarity=0.391 Sum_probs=32.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcC-CCEEEEecCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQG-VPFIILERANC 53 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g-~~v~lie~~~~ 53 (408)
.+|+||||||.||+.+|.+|++.+ .+|+|||+.+.
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 479999999999999999999998 79999999876
No 306
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.09 E-value=0.0001 Score=77.53 Aligned_cols=35 Identities=9% Similarity=0.213 Sum_probs=32.0
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCC-ccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNA-KPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~-~V~~~~r~~ 209 (408)
.+++|+|||+|..|+.+|..|++.|. +|+++.+.+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQE 221 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 36789999999999999999999998 799999875
No 307
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.01 E-value=0.00051 Score=66.49 Aligned_cols=37 Identities=24% Similarity=0.314 Sum_probs=33.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
.+|++|||+|++|+.+|.+|++.|.+|+|+|+....+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4689999999999999999999999999999987543
No 308
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.97 E-value=0.00032 Score=67.01 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=31.4
Q ss_pred CCeEEEEccCCcHHHHHHHHhc-c------CCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCN-H------NAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~-~------g~~V~~~~r~~ 209 (408)
.++|+|||+|..|+.+|..|.+ . +.+|+++.+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~ 43 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 43 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCC
Confidence 5689999999999999999999 7 89999999886
No 309
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.97 E-value=0.0019 Score=59.90 Aligned_cols=33 Identities=15% Similarity=0.426 Sum_probs=30.8
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999875
No 310
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.97 E-value=0.00039 Score=68.21 Aligned_cols=34 Identities=26% Similarity=0.521 Sum_probs=31.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHc-CCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ-GVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~~~ 52 (408)
.+|+||||||.||+.+|.+|++. +.+|+|||+.+
T Consensus 19 ~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 19 TVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 58999999999999999999986 78999999987
No 311
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.94 E-value=0.00027 Score=67.51 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=31.5
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccC--CccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHN--AKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g--~~V~~~~r~~ 209 (408)
..++|+|||+|.+|+.+|..|.+.| .+|+++.+.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~ 41 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL 41 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3578999999999999999999988 8999999876
No 312
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.93 E-value=0.0059 Score=60.17 Aligned_cols=33 Identities=15% Similarity=0.384 Sum_probs=30.8
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-+|+|||+|..|+++|..+++.|.+|.++.+++
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 479999999999999999999999999999864
No 313
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.92 E-value=0.0048 Score=60.64 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=31.5
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..+|+|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~ 159 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEP 159 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3479999999999999999999999999999876
No 314
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.89 E-value=0.00022 Score=72.39 Aligned_cols=100 Identities=16% Similarity=0.103 Sum_probs=63.5
Q ss_pred cCCcEEEC--CChHHHHHHHHHHHcCCCEEEEecCCCCCCccCCCCCCCeeeecCCccccCCCCCCCCCCCCCCCccCcc
Q 035488 19 VNGPVIVG--AGPSGLAVAAGLKNQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPRVPHQFDIN 96 (408)
Q Consensus 19 ~~~vvIIG--~G~aGl~~A~~l~~~g~~v~lie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (408)
.++|+||| ||..|+.+|..|++.|.+|+++++.+ +..... ++. . ...+.+.+.+.+++
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~---~~~-------~---------~~~~~~~l~~~GV~ 587 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMH---FTL-------E---------YPNMMRRLHELHVE 587 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHH---HTT-------C---------HHHHHHHHHHTTCE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccc---ccc-------c---------HHHHHHHHHhCCCE
Confidence 46899999 99999999999999999999999987 431000 000 0 00111222355899
Q ss_pred ccccceeEEEEEcCCCCcEEEEEeecCCCC--------------cceEEEEeCEEEEeeC
Q 035488 97 PRFNETVQSAKYDETFGFWRIKTISSSDSS--------------FCEVEYICRWLVVATG 142 (408)
Q Consensus 97 ~~~~~~V~~i~~~~~~~~~~V~~~~~~~~~--------------~~~~~i~ad~vViAtG 142 (408)
++.+++|.+++.. ...++....++.+ ..+.++.+|.||+|+|
T Consensus 588 i~~~~~v~~i~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G 643 (729)
T 1o94_A 588 ELGDHFCSRIEPG----RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTG 643 (729)
T ss_dssp EECSEEEEEEETT----EEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESC
T ss_pred EEcCcEEEEEECC----eEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCC
Confidence 9999999998742 2223321111100 0013599999999999
No 315
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.88 E-value=0.0013 Score=61.95 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=31.0
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 316
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.82 E-value=0.0035 Score=58.40 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=30.6
Q ss_pred eEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 69999999999999999999999999999877
No 317
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.82 E-value=0.00083 Score=65.04 Aligned_cols=35 Identities=26% Similarity=0.442 Sum_probs=32.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANC 53 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~ 53 (408)
.+|++|||+|++|+.+|.+|++.|.+|+|+|+...
T Consensus 11 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 11 RVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 47999999999999999999999999999999864
No 318
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.81 E-value=0.0015 Score=65.66 Aligned_cols=29 Identities=28% Similarity=0.288 Sum_probs=25.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEE
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFII 47 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~l 47 (408)
.++|+|||||+.|+.+|..|++.|.+|++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 57899999999999999999999876654
No 319
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.80 E-value=0.0044 Score=57.89 Aligned_cols=35 Identities=23% Similarity=0.341 Sum_probs=32.5
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
...+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 34689999999999999999999999999999986
No 320
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.76 E-value=0.0053 Score=60.26 Aligned_cols=33 Identities=33% Similarity=0.507 Sum_probs=31.0
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~ 154 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAP 154 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 379999999999999999999999999999876
No 321
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.76 E-value=0.0023 Score=62.99 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=32.3
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
...+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 35799999999999999999999999999999875
No 322
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.76 E-value=0.00028 Score=69.34 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=30.8
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~ 82 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLV 82 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 479999999999999999999999999999876
No 323
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.75 E-value=0.00093 Score=65.88 Aligned_cols=36 Identities=28% Similarity=0.452 Sum_probs=32.9
Q ss_pred ccCCcEEECCChHHHHHHHHHHH-cCCCEEEEecCCC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKN-QGVPFIILERANC 53 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~-~g~~v~lie~~~~ 53 (408)
..+|++|||+|++|+.+|.+|++ .|.+|+|+|+...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 35799999999999999999999 7999999999854
No 324
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.75 E-value=0.0056 Score=55.53 Aligned_cols=33 Identities=15% Similarity=0.321 Sum_probs=31.1
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 479999999999999999999999999999876
No 325
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.75 E-value=0.00047 Score=67.46 Aligned_cols=36 Identities=36% Similarity=0.408 Sum_probs=32.3
Q ss_pred cCCcEEECCChHHHHHHHHHHH-cCCCEEEEecCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKN-QGVPFIILERANCI 54 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~-~g~~v~lie~~~~~ 54 (408)
.+|++|||||.||+.+|.+|++ .+.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 3699999999999999999999 58999999997644
No 326
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.72 E-value=0.0081 Score=58.98 Aligned_cols=33 Identities=33% Similarity=0.529 Sum_probs=30.8
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-+|+|||+|..|+++|..+++.|.+|.++.+++
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 479999999999999999999999999999864
No 327
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.66 E-value=0.0029 Score=53.61 Aligned_cols=36 Identities=25% Similarity=0.367 Sum_probs=32.6
Q ss_pred CCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEec
Q 035488 173 SYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRS 208 (408)
Q Consensus 173 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~ 208 (408)
...+++|+|||+|.+|...+..|.+.|++|+++.+.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 357899999999999999999999999999998654
No 328
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.60 E-value=0.0018 Score=51.74 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=31.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
..+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999875
No 329
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.59 E-value=0.007 Score=56.01 Aligned_cols=34 Identities=18% Similarity=0.318 Sum_probs=31.3
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 3479999999999999999999999999999865
No 330
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.58 E-value=0.0011 Score=64.68 Aligned_cols=36 Identities=31% Similarity=0.386 Sum_probs=32.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHc-CCCEEEEecCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ-GVPFIILERANCI 54 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~~~~~ 54 (408)
.+|++|||+|++|+.+|.+|++. |.+|+|+|+....
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 47999999999999999999998 8999999998543
No 331
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.57 E-value=0.0048 Score=59.78 Aligned_cols=33 Identities=15% Similarity=0.278 Sum_probs=31.1
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 479999999999999999999999999999876
No 332
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.56 E-value=0.01 Score=57.48 Aligned_cols=33 Identities=27% Similarity=0.436 Sum_probs=31.0
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-.|+|||+|..|+-+|..|++.|.+|+++.+.+
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~ 74 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGADVLVLERTS 74 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 369999999999999999999999999999876
No 333
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.56 E-value=0.0075 Score=59.39 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=31.3
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.-+|+|||+|..|+++|..+++.|.+|.++.+++
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 3489999999999999999999999999999874
No 334
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.55 E-value=0.0052 Score=57.40 Aligned_cols=33 Identities=18% Similarity=0.386 Sum_probs=30.9
Q ss_pred CeEEEEccCCcHHHHHHHHhc-cC-CccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCN-HN-AKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~-~g-~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|++ .| .+|+++.+.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 99 8999999876
No 335
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.53 E-value=0.0031 Score=58.91 Aligned_cols=32 Identities=28% Similarity=0.414 Sum_probs=30.7
Q ss_pred eEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
+|+|||+|.+|+-+|..|++.|.+|+++.|.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 79999999999999999999999999999876
No 336
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.53 E-value=0.0049 Score=59.49 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=32.3
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
...+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 45 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLP 45 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34579999999999999999999999999999876
No 337
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.51 E-value=0.0022 Score=60.19 Aligned_cols=35 Identities=14% Similarity=0.270 Sum_probs=32.1
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 44589999999999999999999999999999987
No 338
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.49 E-value=0.0053 Score=58.46 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=31.1
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 379999999999999999999999999999876
No 339
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.49 E-value=0.0088 Score=58.37 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=30.9
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+.+|..|.+.|.+|+++.+++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 49 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAG 49 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999876
No 340
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.46 E-value=0.0038 Score=49.69 Aligned_cols=34 Identities=9% Similarity=0.178 Sum_probs=31.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
..+|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4579999999999999999999999999999863
No 341
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.45 E-value=0.0084 Score=58.90 Aligned_cols=34 Identities=18% Similarity=0.434 Sum_probs=31.5
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..+|+|||+|..|+.+|..|++.|.+|+++.+.+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~ 159 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEP 159 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 3479999999999999999999999999999876
No 342
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.45 E-value=0.0041 Score=60.66 Aligned_cols=33 Identities=30% Similarity=0.462 Sum_probs=31.4
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 479999999999999999999999999999887
No 343
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.42 E-value=0.0037 Score=48.93 Aligned_cols=34 Identities=12% Similarity=0.382 Sum_probs=31.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4589999999999999999999999999999875
No 344
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.36 E-value=0.0015 Score=60.87 Aligned_cols=33 Identities=27% Similarity=0.310 Sum_probs=31.1
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 379999999999999999999999999999887
No 345
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.30 E-value=0.0057 Score=59.06 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=32.2
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
...+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 44 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLV 44 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 34579999999999999999999999999999887
No 346
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.28 E-value=0.0051 Score=48.15 Aligned_cols=33 Identities=24% Similarity=0.533 Sum_probs=31.3
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 479999999999999999999999999999975
No 347
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.21 E-value=0.016 Score=58.41 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=31.6
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4689999999999999999999999999999864
No 348
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.19 E-value=0.011 Score=57.12 Aligned_cols=35 Identities=14% Similarity=0.270 Sum_probs=30.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHc--CCCEEEEecCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERANC 53 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~~ 53 (408)
.++|+|||+|-+|+.++..|++. +.+|+++-|.+.
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 56899999999999999999886 679999998763
No 349
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.18 E-value=0.0073 Score=55.07 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=30.4
Q ss_pred CeEEEEccCCcHHHHHHHHhc---cCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCN---HNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~---~g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|++ .|.+|+++.+++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 379999999999999999999 899999999875
No 350
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.04 E-value=0.021 Score=54.60 Aligned_cols=31 Identities=16% Similarity=0.457 Sum_probs=29.1
Q ss_pred eEEEEccCCcHHHHHHHHhccCCccEEEEec
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHNAKPSMVVRS 208 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~ 208 (408)
+|+|||+|..|+-+|..|++.|.+|+++.+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 4899999999999999999999999999886
No 351
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.97 E-value=0.0062 Score=47.32 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=30.2
Q ss_pred CcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999864
No 352
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.93 E-value=0.0078 Score=46.97 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=31.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999864
No 353
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.92 E-value=0.0066 Score=58.49 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=29.9
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|..|+.+|..|++. .+|+++.+.+
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~ 140 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERG 140 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTS
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCC
Confidence 4799999999999999999999 9999999876
No 354
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.87 E-value=0.053 Score=52.73 Aligned_cols=32 Identities=22% Similarity=0.534 Sum_probs=29.8
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-+|+|||+|.+|+-+|..+++ |.+|+++.+.+
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~ 40 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGP 40 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSC
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCC
Confidence 369999999999999999999 99999999876
No 355
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.84 E-value=0.006 Score=45.79 Aligned_cols=33 Identities=27% Similarity=0.312 Sum_probs=30.6
Q ss_pred CCcEEECCChHHHHHHHHHHHcC-CCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQG-VPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g-~~v~lie~~~ 52 (408)
++|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 8999999864
No 356
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.64 E-value=0.0055 Score=53.48 Aligned_cols=32 Identities=16% Similarity=0.348 Sum_probs=30.5
Q ss_pred eEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999876
No 357
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.62 E-value=0.077 Score=52.16 Aligned_cols=32 Identities=19% Similarity=0.469 Sum_probs=30.5
Q ss_pred eEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.|+|||+|.+|+-+|..+++.|.+|+++.+.+
T Consensus 9 DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~ 40 (588)
T 2wdq_A 9 DAVVIGAGGAGMRAALQISQSGQTCALLSKVF 40 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 79999999999999999999999999999876
No 358
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.48 E-value=0.16 Score=50.10 Aligned_cols=32 Identities=22% Similarity=0.494 Sum_probs=30.2
Q ss_pred eEEEEccCCcHHHHHHHHhccC--CccEEEEecC
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHN--AKPSMVVRSS 209 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g--~~V~~~~r~~ 209 (408)
+|+|||+|.+|+-+|..|++.| .+|+++.+.+
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~ 40 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 6999999999999999999999 9999999875
No 359
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.40 E-value=0.014 Score=53.69 Aligned_cols=37 Identities=16% Similarity=0.274 Sum_probs=33.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCIA 55 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~g 55 (408)
|++|+|+|||..|..+|..+++.|++++++|.++...
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~ 37 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQAL 37 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 5689999999999999999999999999999887544
No 360
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.38 E-value=0.092 Score=51.90 Aligned_cols=32 Identities=22% Similarity=0.431 Sum_probs=30.5
Q ss_pred eEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.|+|||+|..|+-+|..+++.|.+|.++.+.+
T Consensus 20 DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 20 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 79999999999999999999999999999875
No 361
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.36 E-value=0.016 Score=47.54 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=31.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHc-CCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ-GVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~~~ 52 (408)
..+|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 35799999999999999999999 99999999875
No 362
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.34 E-value=0.013 Score=51.87 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=31.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+++|.|||+|..|...|..+++.|++|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4589999999999999999999999999999875
No 363
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.33 E-value=0.015 Score=49.13 Aligned_cols=34 Identities=15% Similarity=0.296 Sum_probs=31.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.++|+|||||..|...|..|.+.|.+|+|+++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 5789999999999999999999999999999753
No 364
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.32 E-value=0.012 Score=55.82 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=31.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.++|+|||.|.+|+++|..|+++|++|++.|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4689999999999999999999999999999865
No 365
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.31 E-value=0.22 Score=49.51 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=30.3
Q ss_pred eEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.|+|||+|.+|+-.|..+++.|.+|+++.+.+
T Consensus 7 DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~ 38 (660)
T 2bs2_A 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (660)
T ss_dssp SEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 69999999999999999999999999999876
No 366
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.04 E-value=0.016 Score=54.92 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=32.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCI 54 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~ 54 (408)
.++|+|||.|.+|+++|..|+++|++|+++|.....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 357999999999999999999999999999987654
No 367
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.80 E-value=0.024 Score=50.81 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=31.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
..+|.|||+|..|...|..++..|++|+++|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3479999999999999999999999999999875
No 368
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.80 E-value=0.011 Score=56.96 Aligned_cols=33 Identities=18% Similarity=0.339 Sum_probs=30.7
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
|+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 689999999999999999999999999999876
No 369
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.74 E-value=0.015 Score=50.83 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=32.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANC 53 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~ 53 (408)
.++|+|||||..|...|..|.+.|.+|+||+++.+
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 46799999999999999999999999999998653
No 370
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.72 E-value=0.025 Score=47.83 Aligned_cols=32 Identities=13% Similarity=0.318 Sum_probs=30.4
Q ss_pred CcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999875
No 371
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.65 E-value=0.047 Score=51.78 Aligned_cols=36 Identities=25% Similarity=0.297 Sum_probs=33.2
Q ss_pred CCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 174 YRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 174 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
+.+++|.|||.|.+|+-+|..|++.|.+|+..++++
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 468999999999999999999999999999998765
No 372
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.64 E-value=0.024 Score=52.41 Aligned_cols=34 Identities=21% Similarity=0.269 Sum_probs=31.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
..+|+|||+|.+|+.+|..++..|.+|+++|+++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999876
No 373
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.64 E-value=0.025 Score=53.83 Aligned_cols=47 Identities=15% Similarity=0.100 Sum_probs=38.4
Q ss_pred chhhhhcccccccCCcEEECCChHHHHHHHHHHHc-CC-CEEEEecCCC
Q 035488 7 TNDEFLSNRCIWVNGPVIVGAGPSGLAVAAGLKNQ-GV-PFIILERANC 53 (408)
Q Consensus 7 ~~~~~~~~~~~~~~~vvIIG~G~aGl~~A~~l~~~-g~-~v~lie~~~~ 53 (408)
++.+...++.+.+.+|.|||+|..|+..|..|++. |+ +|+++|+++.
T Consensus 6 ~~~~~~~~~~~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 6 SKLEKLLKERGPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CHHHHHHHHHCSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred hHHHHHHhhcCCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 34444444444566899999999999999999999 99 9999999875
No 374
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.58 E-value=0.029 Score=50.50 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=31.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+++|.|||+|..|.+.|..+++.|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999875
No 375
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.53 E-value=0.035 Score=50.43 Aligned_cols=33 Identities=33% Similarity=0.411 Sum_probs=30.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERA 51 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~ 51 (408)
+.+|+|||+|..|...|..|++.|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 347999999999999999999999999999985
No 376
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.43 E-value=0.031 Score=49.91 Aligned_cols=34 Identities=18% Similarity=0.407 Sum_probs=31.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+++|.|||+|..|...|..|++.|++|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 5679999999999999999999999999999874
No 377
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.35 E-value=0.032 Score=44.31 Aligned_cols=37 Identities=16% Similarity=0.325 Sum_probs=33.1
Q ss_pred CCCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 173 SYRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 173 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
...+++++|+|+|.+|..++..|...|.+|+++.+++
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3467899999999999999999999999999998876
No 378
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.26 E-value=0.023 Score=52.47 Aligned_cols=32 Identities=28% Similarity=0.341 Sum_probs=30.5
Q ss_pred eEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.|+|||+|.+|+-+|..|++.|.+|+++.|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 59999999999999999999999999999876
No 379
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.23 E-value=0.022 Score=53.73 Aligned_cols=34 Identities=26% Similarity=0.490 Sum_probs=31.5
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.++|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4689999999999999999999999999999876
No 380
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.23 E-value=0.035 Score=49.78 Aligned_cols=38 Identities=18% Similarity=0.210 Sum_probs=33.8
Q ss_pred ccccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 035488 16 CIWVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANC 53 (408)
Q Consensus 16 ~~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~ 53 (408)
...+.+|.|||.|..|...|..|++.|++|+++|+++.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 34467899999999999999999999999999998753
No 381
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.17 E-value=0.03 Score=51.28 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=31.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
..+|+|||+|..|+.+|..|+..|.+|+++|+++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 382
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.12 E-value=0.056 Score=47.62 Aligned_cols=35 Identities=31% Similarity=0.394 Sum_probs=32.1
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+++|+|.|+|..|-.++..|.+.|++|+++.++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 34589999999999999999999999999999875
No 383
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.07 E-value=0.034 Score=50.84 Aligned_cols=34 Identities=21% Similarity=0.416 Sum_probs=31.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV-PFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~ 52 (408)
.-+|||+|||.+|+.+|..|...|. +|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4579999999999999999999999 999999974
No 384
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.06 E-value=0.047 Score=49.94 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=31.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+.+|.|||+|.-|.+.|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999874
No 385
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.03 E-value=0.045 Score=49.47 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=30.8
Q ss_pred CCcEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGV-PFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~ 52 (408)
.+|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999998 999999875
No 386
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.99 E-value=0.039 Score=49.42 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=30.6
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+|.|||+|..|...|..|++.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 369999999999999999999999999999864
No 387
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.98 E-value=0.043 Score=49.61 Aligned_cols=34 Identities=21% Similarity=0.166 Sum_probs=30.9
Q ss_pred cCCcEEECCChHHHH-HHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLA-VAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~-~A~~l~~~g~~v~lie~~~ 52 (408)
+++|.|||.|.+|++ +|..|+++|++|++.|++.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 457999999999996 7899999999999999875
No 388
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.96 E-value=0.031 Score=47.41 Aligned_cols=36 Identities=31% Similarity=0.396 Sum_probs=31.9
Q ss_pred cccCCcEEECCChHHHHHHHHHHHcCCCEEE-EecCC
Q 035488 17 IWVNGPVIVGAGPSGLAVAAGLKNQGVPFII-LERAN 52 (408)
Q Consensus 17 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~l-ie~~~ 52 (408)
|.+.+|.|||+|..|.+.|..|++.|++|++ +++++
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 3456899999999999999999999999998 77764
No 389
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.82 E-value=0.053 Score=42.85 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=32.0
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..++++|+|+|.+|..++..|.+.|.+|+++.+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 45789999999999999999999999999998874
No 390
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.82 E-value=0.086 Score=47.61 Aligned_cols=34 Identities=15% Similarity=0.055 Sum_probs=30.8
Q ss_pred CCeEEEEccCCcHHH-HHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGME-VSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e-~a~~l~~~g~~V~~~~r~~ 209 (408)
.+++.|||.|.+|+. +|..|+++|.+|+..++++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 578999999999997 8999999999999998765
No 391
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.76 E-value=0.054 Score=51.41 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=32.0
Q ss_pred CCCCeEEEEccCCcHHHHHHHHhccCCccEEEEec
Q 035488 174 YRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRS 208 (408)
Q Consensus 174 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~ 208 (408)
..+++|+|||+|.+|...+..|.+.|++|+++...
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 46789999999999999999999999999998754
No 392
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.64 E-value=0.051 Score=47.48 Aligned_cols=36 Identities=25% Similarity=0.440 Sum_probs=32.8
Q ss_pred CCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 174 YRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 174 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..+++|+|||+|.+|...+..|.+.|++|+++....
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 468999999999999999999999999999997643
No 393
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.63 E-value=0.053 Score=48.84 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=30.4
Q ss_pred CcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+|+|||+|.-|...|..|++.|.+|+++++++
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 69999999999999999999999999999865
No 394
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.59 E-value=0.028 Score=51.71 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=30.6
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 379999999999999999999999999999864
No 395
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.58 E-value=0.063 Score=45.03 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=31.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANC 53 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~ 53 (408)
..+|.|||+|..|.+.|..|++.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45799999999999999999999999999998753
No 396
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.57 E-value=0.081 Score=47.62 Aligned_cols=33 Identities=30% Similarity=0.319 Sum_probs=30.5
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|.-+|..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999998865
No 397
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.56 E-value=0.024 Score=44.35 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=30.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.++|+|||+|..|...|..|++.|++|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 398
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.55 E-value=0.04 Score=50.71 Aligned_cols=33 Identities=27% Similarity=0.330 Sum_probs=30.9
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
++|+|||+|..|++.|..+++.|.+|+++.+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 479999999999999999999999999999876
No 399
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.52 E-value=0.058 Score=48.37 Aligned_cols=33 Identities=36% Similarity=0.374 Sum_probs=30.4
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+|+|||+|..|.+.|..|++.|.+|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 369999999999999999999999999999864
No 400
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.50 E-value=0.05 Score=49.69 Aligned_cols=33 Identities=24% Similarity=0.383 Sum_probs=30.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC-CEEEEecC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV-PFIILERA 51 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~ 51 (408)
..+|+|+|||.+|..+|..|...|. +|+++|++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4579999999999999999999998 79999997
No 401
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.49 E-value=0.05 Score=50.67 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=31.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
..+|+|||+|.+|+.+|..++..|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999875
No 402
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.47 E-value=0.047 Score=50.68 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=31.0
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 379999999999999999999999999999876
No 403
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.40 E-value=0.09 Score=47.27 Aligned_cols=35 Identities=17% Similarity=0.339 Sum_probs=29.6
Q ss_pred CCCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 174 YRGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 174 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
....+|+|||+|..|.-+|..|++.|.+|+++ +++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 46779999999999999999999999999988 654
No 404
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=93.39 E-value=0.088 Score=47.73 Aligned_cols=34 Identities=21% Similarity=0.191 Sum_probs=29.9
Q ss_pred cCCcEEECC-ChHHHHHHHHHHHcCC--CEEEEecCC
Q 035488 19 VNGPVIVGA-GPSGLAVAAGLKNQGV--PFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~-G~aGl~~A~~l~~~g~--~v~lie~~~ 52 (408)
..+|+|||+ |..|.++|..++..|. +++++|.+.
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 347999998 9999999999999985 899999754
No 405
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.31 E-value=0.061 Score=49.21 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=30.6
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+|+|||+|..|...|..|++.|++|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 406
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.31 E-value=0.061 Score=49.81 Aligned_cols=34 Identities=21% Similarity=0.292 Sum_probs=31.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
..+|+|+|+|.+|+.+|..++..|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 407
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.28 E-value=0.064 Score=48.25 Aligned_cols=33 Identities=21% Similarity=0.437 Sum_probs=30.5
Q ss_pred CCcEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGV--PFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~--~v~lie~~~ 52 (408)
.+|+|||+|..|..+|..|++.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999998 999999864
No 408
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.23 E-value=0.061 Score=47.60 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=31.5
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANC 53 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~ 53 (408)
.+|.|||.|..|...|..|++.|++|+++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998753
No 409
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.19 E-value=0.048 Score=49.84 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=31.0
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999875
No 410
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.17 E-value=0.069 Score=48.98 Aligned_cols=34 Identities=24% Similarity=0.238 Sum_probs=31.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
..+|+|+|+|.+|..++..|+..|.+|+++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 411
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.14 E-value=0.1 Score=46.71 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=29.7
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|..|.-+|..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999988764
No 412
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=93.14 E-value=0.048 Score=51.13 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=30.8
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
++|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 379999999999999999999999999999875
No 413
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.12 E-value=0.081 Score=47.86 Aligned_cols=32 Identities=9% Similarity=0.165 Sum_probs=30.2
Q ss_pred CcEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQGV-PFIILERAN 52 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~ 52 (408)
+|+|||+|..|.++|..|+..|+ +|+++|.+.
T Consensus 11 kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 11 KVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 69999999999999999999998 999999875
No 414
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.12 E-value=0.08 Score=47.63 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=31.7
Q ss_pred cccCCcEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 035488 17 IWVNGPVIVGAGPSGLAVAAGLKNQGV-PFIILERAN 52 (408)
Q Consensus 17 ~~~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~ 52 (408)
|.+.+|+|||+|..|.++|..|+..|+ +++++|.++
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 334579999999999999999999998 999999875
No 415
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.11 E-value=0.096 Score=46.60 Aligned_cols=34 Identities=38% Similarity=0.541 Sum_probs=31.3
Q ss_pred cCCcEEEC-CChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVG-AGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG-~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+.+|.||| +|..|.+.|..|++.|++|+++++++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 35899999 99999999999999999999999865
No 416
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.11 E-value=0.072 Score=50.25 Aligned_cols=36 Identities=28% Similarity=0.368 Sum_probs=33.0
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANC 53 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~ 53 (408)
.+++|.|||+|..|...|..+++.|++|+++|+++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 357899999999999999999999999999999764
No 417
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.05 E-value=0.091 Score=50.15 Aligned_cols=34 Identities=18% Similarity=0.396 Sum_probs=31.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+++|.|||+|..|...|..+++.|++|+++|+++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4589999999999999999999999999999875
No 418
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.03 E-value=0.066 Score=46.28 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=31.2
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV-PFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~ 52 (408)
..+|+|||+|-.|..+|..|++.|+ +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999998 899999875
No 419
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.99 E-value=0.068 Score=50.85 Aligned_cols=36 Identities=19% Similarity=0.327 Sum_probs=32.6
Q ss_pred cccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 17 IWVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 17 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+.+.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 35 ~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 35 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 345689999999999999999999999999999875
No 420
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.99 E-value=0.054 Score=50.03 Aligned_cols=33 Identities=30% Similarity=0.440 Sum_probs=30.9
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999876
No 421
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=92.97 E-value=0.042 Score=50.47 Aligned_cols=33 Identities=12% Similarity=0.187 Sum_probs=30.8
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 369999999999999999999999999999875
No 422
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.95 E-value=0.08 Score=46.71 Aligned_cols=33 Identities=21% Similarity=0.151 Sum_probs=30.6
Q ss_pred CcEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQGVPFIILERANC 53 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~ 53 (408)
+|.|||+|..|...|..|++.|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 599999999999999999999999999998753
No 423
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.93 E-value=0.074 Score=49.87 Aligned_cols=37 Identities=16% Similarity=0.192 Sum_probs=33.6
Q ss_pred ccccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 16 CIWVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 16 ~~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+..|.+|+|||.|..|+..|..+++.|++|+.+|-++
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4457799999999999999999999999999999874
No 424
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.89 E-value=0.087 Score=46.78 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=30.7
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+|+|||+|.-|...|..|++.|.+|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 369999999999999999999999999999874
No 425
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=92.89 E-value=0.11 Score=48.03 Aligned_cols=38 Identities=18% Similarity=0.284 Sum_probs=33.7
Q ss_pred cccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 035488 17 IWVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCI 54 (408)
Q Consensus 17 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~ 54 (408)
+..++|+|||+|.-|..++..+++.|++|+++|..+..
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~ 47 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDC 47 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 34578999999999999999999999999999987643
No 426
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.88 E-value=0.12 Score=43.50 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=30.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+.+|.|||+|..|...|..|++.|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 427
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.87 E-value=0.064 Score=49.11 Aligned_cols=34 Identities=29% Similarity=0.449 Sum_probs=31.2
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 3589999999999999999999999999999864
No 428
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.87 E-value=0.077 Score=47.18 Aligned_cols=34 Identities=12% Similarity=0.030 Sum_probs=31.8
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANC 53 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~ 53 (408)
.+|.|||.|..|...|..|++.|++|+++|+++.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999999764
No 429
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=92.81 E-value=0.053 Score=50.81 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=30.8
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 379999999999999999999999999999875
No 430
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.72 E-value=0.11 Score=48.56 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=31.1
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+|+|||.|..|..+|..|.+.|++|++||+++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 369999999999999999999999999999985
No 431
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.70 E-value=0.13 Score=45.94 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=31.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+.+|.|||.|..|...|..|++.|++|+++++++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999875
No 432
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.68 E-value=0.092 Score=47.03 Aligned_cols=33 Identities=18% Similarity=0.311 Sum_probs=30.9
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC-CEEEEecC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV-PFIILERA 51 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~ 51 (408)
..+|+|||+|..|.++|..|+..|+ +++++|.+
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4579999999999999999999999 99999987
No 433
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.68 E-value=0.1 Score=46.87 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=31.4
Q ss_pred ccCCcEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 035488 18 WVNGPVIVGAGPSGLAVAAGLKNQGV-PFIILERAN 52 (408)
Q Consensus 18 ~~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~ 52 (408)
.+.+|+|||+|..|.++|..|+..++ +++++|.++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 34579999999999999999999988 999999875
No 434
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.54 E-value=0.08 Score=47.46 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=30.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC-CEEEEecC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV-PFIILERA 51 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~ 51 (408)
+.+|.|||.|..|...|..|++.|+ +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 5689999999999999999999999 99999995
No 435
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=92.51 E-value=0.06 Score=49.74 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=30.8
Q ss_pred CeEEEEccCCcHHHHHHHHhcc--CCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNH--NAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~--g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|++. |.+|+++.+++
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKND 35 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 3799999999999999999999 99999999876
No 436
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.51 E-value=0.1 Score=40.52 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=32.5
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..++++|+|.|.+|..+|..|.+.|.+|+++.+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 45789999999999999999999999999999877
No 437
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.48 E-value=0.11 Score=44.72 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=31.8
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.++|.|||+|-.|.+.|..|++.|++|+++++++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 5689999999999999999999999999999875
No 438
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.48 E-value=0.06 Score=51.71 Aligned_cols=35 Identities=23% Similarity=0.410 Sum_probs=32.2
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..++|+|||+|.+|+.+|..|.+.|.+|+++.+++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 46789999999999999999999999999998865
No 439
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=92.47 E-value=0.078 Score=49.49 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=31.4
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCc-cEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAK-PSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~-V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|++.|.+ |+++.+++
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 5899999999999999999999999 99999877
No 440
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.39 E-value=0.1 Score=48.01 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=31.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
..+|+|+|+|..|..+|..++..|.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 441
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=92.37 E-value=0.066 Score=50.28 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=30.2
Q ss_pred eEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCC
Confidence 69999999999999999999999999999864
No 442
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.35 E-value=0.13 Score=44.75 Aligned_cols=35 Identities=20% Similarity=0.207 Sum_probs=31.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcC----CCEEEEecCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQG----VPFIILERANC 53 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g----~~v~lie~~~~ 53 (408)
+.+|.|||+|..|.+.|..|++.| ++|+++++++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 347999999999999999999999 69999998764
No 443
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.30 E-value=0.14 Score=44.98 Aligned_cols=34 Identities=18% Similarity=0.339 Sum_probs=31.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC---CEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV---PFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~---~v~lie~~~ 52 (408)
+.+|.|||+|-.|.+.|..|.+.|+ +|+++++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4579999999999999999999998 999999875
No 444
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=92.28 E-value=0.07 Score=49.03 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=30.8
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..++|+|||+|.+|+-+|..|+ .|.+|+++.+++
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 3578999999999999999999 599999999875
No 445
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.25 E-value=0.12 Score=46.40 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=30.4
Q ss_pred CCcEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGV-PFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~ 52 (408)
.+|+|||+|..|.++|..|+..|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999865
No 446
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.24 E-value=0.11 Score=47.94 Aligned_cols=34 Identities=24% Similarity=0.353 Sum_probs=31.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
..+|+|||+|..|..+|..++..|.+|+++|++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 5689999999999999999999999999999864
No 447
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=92.24 E-value=0.1 Score=46.21 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=31.0
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
-++|.|||+|..|...|..++ .|++|+++|+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 568999999999999999999 999999999875
No 448
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.21 E-value=0.1 Score=47.03 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=31.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+.+|.|||.|..|...|..|++.|++|+++++++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4589999999999999999999999999999875
No 449
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.19 E-value=0.095 Score=49.05 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=31.0
Q ss_pred cccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 17 IWVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 17 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+.+.+|.|||.|..|+..|..|++ |++|+++|+++
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 345689999999999999999998 99999999875
No 450
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.18 E-value=0.098 Score=49.91 Aligned_cols=33 Identities=27% Similarity=0.417 Sum_probs=30.8
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+|.|||+|..|+..|..|++.|++|+++|++.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999864
No 451
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.18 E-value=0.095 Score=46.68 Aligned_cols=34 Identities=18% Similarity=0.340 Sum_probs=31.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+.+|.|||.|..|...|..|++.|++|+++++++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4579999999999999999999999999999875
No 452
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=92.15 E-value=0.16 Score=47.08 Aligned_cols=36 Identities=22% Similarity=0.277 Sum_probs=32.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCI 54 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~ 54 (408)
.++|+|||+|..|..+|..+++.|++|+++|..+..
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~ 49 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNS 49 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC
Confidence 568999999999999999999999999999987643
No 453
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.14 E-value=0.1 Score=49.48 Aligned_cols=34 Identities=21% Similarity=0.135 Sum_probs=31.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.++|+|||||..|...|..|.+.|.+|+|++++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4579999999999999999999999999999864
No 454
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.13 E-value=0.15 Score=46.21 Aligned_cols=36 Identities=25% Similarity=0.275 Sum_probs=31.0
Q ss_pred ccCCcEEECC-ChHHHHHHHHHHHcCCCEEEEecCCC
Q 035488 18 WVNGPVIVGA-GPSGLAVAAGLKNQGVPFIILERANC 53 (408)
Q Consensus 18 ~~~~vvIIG~-G~aGl~~A~~l~~~g~~v~lie~~~~ 53 (408)
..++|+|.|| |..|..++..|.+.|++|+++++...
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 3578999999 99999999999999999999998763
No 455
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.11 E-value=0.11 Score=46.28 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=29.9
Q ss_pred CcEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQGV--PFIILERAN 52 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~g~--~v~lie~~~ 52 (408)
+|+|||+|..|.++|..|+..|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 59999999999999999999998 899999864
No 456
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.10 E-value=0.08 Score=50.94 Aligned_cols=33 Identities=24% Similarity=0.331 Sum_probs=30.0
Q ss_pred CeEEEEccCCcHHHHHHHHhcc-CCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNH-NAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~-g~~V~~~~r~~ 209 (408)
-.|+|||+|.+|+-+|..|++. |.+|+++.+++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~ 44 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNE 44 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 3699999999999999999974 99999999876
No 457
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.04 E-value=0.092 Score=50.18 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=30.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHc--CCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQ--GVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~--g~~v~lie~~~ 52 (408)
+.+|.|||.|..|+..|..|++. |++|+++|++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 34799999999999999999998 78999999864
No 458
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.04 E-value=0.084 Score=40.95 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=31.5
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.++++|+|+|.+|..+|..|.+.|.+|+++.+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999998876
No 459
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.03 E-value=0.089 Score=49.56 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=31.5
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCC-ccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNA-KPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~-~V~~~~r~~ 209 (408)
..+|+|||+|.+|+-+|..|++.|. +|+++.+.+
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3579999999999999999999999 999999876
No 460
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=92.03 E-value=0.079 Score=50.49 Aligned_cols=33 Identities=33% Similarity=0.463 Sum_probs=30.8
Q ss_pred CeEEEEccCCcHHHHHHHHhccCC--ccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNA--KPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~--~V~~~~r~~ 209 (408)
++|+|||+|.+|+-+|..|++.|. +|+++.+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 589999999999999999999999 999999865
No 461
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.01 E-value=0.14 Score=44.66 Aligned_cols=34 Identities=38% Similarity=0.596 Sum_probs=31.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.++++|||+|-+|-++|..|++.|.+|+|++|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 462
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.00 E-value=0.14 Score=42.28 Aligned_cols=33 Identities=30% Similarity=0.427 Sum_probs=30.5
Q ss_pred CCcEEECC-ChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGA-GPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~-G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
++|+|.|| |..|..++..|.+.|++|++++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 46999999 9999999999999999999999865
No 463
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.98 E-value=0.078 Score=48.27 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=30.0
Q ss_pred eEEEEccCCcHHHHHHHHhccC------CccEEEEecC
Q 035488 178 RVLVVGCGNSGMEVSLDLCNHN------AKPSMVVRSS 209 (408)
Q Consensus 178 ~v~VvG~G~~a~e~a~~l~~~g------~~V~~~~r~~ 209 (408)
+|+|||+|.+|+-+|..|++.| .+|+++.+..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 7999999999999999999998 8999999875
No 464
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.98 E-value=0.11 Score=46.65 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=30.6
Q ss_pred CCcEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGV-PFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~ 52 (408)
.+|+|||+|..|.+.|..|++.|+ +|+++|.++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 369999999999999999999998 999999875
No 465
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=91.91 E-value=0.092 Score=48.34 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=32.0
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEec
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRS 208 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~ 208 (408)
...+|+|||+|.+|+-+|..|.+.|.+|+++.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 4678999999999999999999999999999988
No 466
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.91 E-value=0.11 Score=49.01 Aligned_cols=32 Identities=22% Similarity=0.332 Sum_probs=30.6
Q ss_pred CcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+|.|||+|..|+..|..|++.|++|+++|+++
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 69999999999999999999999999999875
No 467
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.91 E-value=0.095 Score=40.33 Aligned_cols=34 Identities=15% Similarity=0.343 Sum_probs=30.3
Q ss_pred CCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 176 GKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 176 ~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
+.+++|+|+|.+|..++..|.+.|.+|+++.+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3589999999999999999999999999988765
No 468
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.88 E-value=0.14 Score=48.93 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=32.0
Q ss_pred ccccCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 16 CIWVNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 16 ~~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
-|..++|.|||.|..|...|..|++.|++|+++++++
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3556789999999999999999999999999999874
No 469
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.87 E-value=0.15 Score=45.04 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=30.7
Q ss_pred CCcEEECC-ChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGA-GPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~-G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+|.|||+ |..|...|..|++.|++|+++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999864
No 470
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.86 E-value=0.12 Score=45.50 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=30.9
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
++|+|.|+|..|-.++..|.+.|++|+++.+++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 469999999999999999999999999999875
No 471
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=91.85 E-value=0.08 Score=39.34 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=31.1
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccC-CccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHN-AKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g-~~V~~~~r~~ 209 (408)
..++++|+|+|.+|..++..|...| .+|+++.|++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 3568999999999999999999999 7898888765
No 472
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.74 E-value=0.12 Score=45.56 Aligned_cols=33 Identities=27% Similarity=0.308 Sum_probs=30.9
Q ss_pred CcEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQGVPFIILERANC 53 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~ 53 (408)
+|.|||.|..|...|..|++.|++|+++++++.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998753
No 473
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.74 E-value=0.17 Score=45.27 Aligned_cols=34 Identities=18% Similarity=0.256 Sum_probs=31.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+.+|.|||+|..|...|..|++.|++|+++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3679999999999999999999999999999865
No 474
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.72 E-value=0.14 Score=44.92 Aligned_cols=34 Identities=21% Similarity=0.186 Sum_probs=31.1
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.++++|+|+|-+|.++|..|++.|.+|++++++.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4679999999999999999999999999999864
No 475
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.71 E-value=0.14 Score=45.72 Aligned_cols=33 Identities=21% Similarity=0.163 Sum_probs=30.9
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+|.|||.|..|...|..|++.|++|+++++++
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 476
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=91.71 E-value=0.098 Score=49.00 Aligned_cols=35 Identities=17% Similarity=0.458 Sum_probs=31.9
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccC-CccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHN-AKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g-~~V~~~~r~~ 209 (408)
...+|+|||+|.+|+-+|..|++.| .+|+++.+++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 3568999999999999999999999 8999999865
No 477
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.70 E-value=0.13 Score=48.45 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=32.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANC 53 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~ 53 (408)
..++.|||.|..|+..|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 34799999999999999999999999999999864
No 478
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=91.69 E-value=0.13 Score=47.09 Aligned_cols=36 Identities=11% Similarity=0.160 Sum_probs=31.9
Q ss_pred cccCCcEEECC-ChHHHHHHHHHHHc-CCCEEEEecCC
Q 035488 17 IWVNGPVIVGA-GPSGLAVAAGLKNQ-GVPFIILERAN 52 (408)
Q Consensus 17 ~~~~~vvIIG~-G~aGl~~A~~l~~~-g~~v~lie~~~ 52 (408)
|.+++|+|.|| |..|-.++..|.+. |++|+++++..
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCCh
Confidence 45678999995 99999999999998 99999999875
No 479
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.69 E-value=0.07 Score=50.67 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=30.4
Q ss_pred CcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 21 GPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 21 ~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+|+|+|+|-.|..+|..|...|++|++||+++
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 59999999999999999999999999999984
No 480
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=91.68 E-value=0.17 Score=46.61 Aligned_cols=35 Identities=23% Similarity=0.291 Sum_probs=31.6
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCI 54 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~ 54 (408)
++|+|||+|..|...|..+++.|+++++++..+..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~~~ 36 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTPRS 36 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 57999999999999999999999999999986543
No 481
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.66 E-value=0.16 Score=45.57 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=31.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGV--PFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~--~v~lie~~~ 52 (408)
..+|.|||.|..|.+.|..|++.|+ +|+++|+++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4689999999999999999999999 999999875
No 482
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.61 E-value=0.14 Score=46.81 Aligned_cols=34 Identities=15% Similarity=0.241 Sum_probs=31.6
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
..+|.|||.|..|...|..|++.|++|+++++++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 483
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=91.57 E-value=0.2 Score=46.10 Aligned_cols=36 Identities=17% Similarity=0.038 Sum_probs=33.3
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERANCI 54 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~ 54 (408)
..+++|+|||+.+.++|..++..|++|+++|..+.+
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~ 239 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF 239 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh
Confidence 468999999999999999999999999999988754
No 484
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.50 E-value=0.14 Score=45.13 Aligned_cols=32 Identities=22% Similarity=0.416 Sum_probs=29.6
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+|.|||+|..|...|..|.+ |++|+++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 369999999999999999999 99999999865
No 485
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.49 E-value=0.15 Score=44.79 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=30.1
Q ss_pred CCcEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGV--PFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~--~v~lie~~~ 52 (408)
++|.|||+|..|.+.|..|++.|+ +|+++|+++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 469999999999999999999998 899999864
No 486
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.48 E-value=0.19 Score=47.75 Aligned_cols=34 Identities=12% Similarity=0.251 Sum_probs=31.7
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+.+|.|||.|..|...|..|++.|++|+++++++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999875
No 487
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.42 E-value=0.13 Score=45.96 Aligned_cols=33 Identities=33% Similarity=0.525 Sum_probs=30.0
Q ss_pred CCcEEECCChHHHHHHHHHHHcC--CCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQG--VPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g--~~v~lie~~~ 52 (408)
.+|+|||+|..|.++|..|++.| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 36999999999999999999999 6899999864
No 488
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=91.42 E-value=0.11 Score=49.68 Aligned_cols=35 Identities=20% Similarity=0.360 Sum_probs=31.8
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
...+|+|||+|.+|+-+|..|.+.|.+|+++.+++
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~ 44 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEART 44 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccC
Confidence 35689999999999999999999999999998765
No 489
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=91.40 E-value=0.1 Score=44.56 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=32.1
Q ss_pred cccccCCcEEEC-CChHHHHHHHHHHHcC-CCEEEEecCC
Q 035488 15 RCIWVNGPVIVG-AGPSGLAVAAGLKNQG-VPFIILERAN 52 (408)
Q Consensus 15 ~~~~~~~vvIIG-~G~aGl~~A~~l~~~g-~~v~lie~~~ 52 (408)
.+|.+++|+|.| +|..|..+|..|++.| ++|+++.++.
T Consensus 19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred ecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 356678999999 4999999999999999 8999999875
No 490
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=91.32 E-value=0.098 Score=49.62 Aligned_cols=33 Identities=21% Similarity=0.158 Sum_probs=31.2
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~ 44 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQD 44 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999886
No 491
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=91.27 E-value=0.13 Score=47.54 Aligned_cols=33 Identities=24% Similarity=0.487 Sum_probs=30.7
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|.+.|.+|+++.+++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 489999999999999999999999999999865
No 492
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=91.26 E-value=0.1 Score=48.67 Aligned_cols=33 Identities=18% Similarity=0.286 Sum_probs=30.7
Q ss_pred CeEEEEccCCcHHHHHHHHhcc--CCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNH--NAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~--g~~V~~~~r~~ 209 (408)
.+|+|||+|.+|+-+|..|++. |.+|+++.+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 4799999999999999999999 99999999865
No 493
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.23 E-value=0.15 Score=39.27 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=31.0
Q ss_pred CCCeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 175 RGKRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 175 ~~~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
..++++|+|+|.+|..++..|...|.+|+++.+++
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999988765
No 494
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=91.21 E-value=0.1 Score=50.26 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=30.8
Q ss_pred CeEEEEccCCcHHHHHHHHhccCCccEEEEecC
Q 035488 177 KRVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSS 209 (408)
Q Consensus 177 ~~v~VvG~G~~a~e~a~~l~~~g~~V~~~~r~~ 209 (408)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 479999999999999999999999999999865
No 495
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=91.20 E-value=0.21 Score=41.95 Aligned_cols=34 Identities=21% Similarity=0.182 Sum_probs=30.2
Q ss_pred cCCcEEECC-ChHHHHHHHHHH-HcCCCEEEEecCC
Q 035488 19 VNGPVIVGA-GPSGLAVAAGLK-NQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~-G~aGl~~A~~l~-~~g~~v~lie~~~ 52 (408)
++.|+|.|| |..|..+|..|+ +.|++|+++.+++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 346999995 999999999999 8999999999864
No 496
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=91.18 E-value=0.18 Score=44.74 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=31.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.++|.|||+|..|..+|..|+..|.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 5689999999999999999999999999999864
No 497
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.17 E-value=0.16 Score=45.56 Aligned_cols=33 Identities=24% Similarity=0.273 Sum_probs=29.4
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
+.+|+|||+|.-|.+.|..|++.|.+|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 457999999999999999999999999999 653
No 498
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.14 E-value=0.18 Score=45.12 Aligned_cols=33 Identities=24% Similarity=0.345 Sum_probs=30.0
Q ss_pred CCcEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGV-PFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~ 52 (408)
.+|+|||+|..|.+.|..++..|+ +++++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 369999999999999999999996 899999864
No 499
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.11 E-value=0.08 Score=45.18 Aligned_cols=32 Identities=31% Similarity=0.403 Sum_probs=29.8
Q ss_pred CCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 20 NGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 20 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+|+|+|+|..|..+|..|.+.|+ |+++|+++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 479999999999999999999999 99999875
No 500
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=91.10 E-value=0.16 Score=48.02 Aligned_cols=34 Identities=32% Similarity=0.394 Sum_probs=31.5
Q ss_pred cCCcEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 035488 19 VNGPVIVGAGPSGLAVAAGLKNQGVPFIILERAN 52 (408)
Q Consensus 19 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~ 52 (408)
.+.++|+|+|..|.++|..|+..|.+|+++|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4789999999999999999999999999999864
Done!