Query 035494
Match_columns 181
No_of_seqs 130 out of 1210
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 03:22:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035494.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035494hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02488 probable pectinestera 100.0 3E-56 6.6E-61 392.8 21.7 173 7-179 195-367 (509)
2 PLN02933 Probable pectinestera 100.0 5.4E-56 1.2E-60 394.9 21.6 175 5-179 214-388 (530)
3 PLN02201 probable pectinestera 100.0 6.6E-56 1.4E-60 394.3 22.1 174 6-179 203-376 (520)
4 PLN02773 pectinesterase 100.0 3E-55 6.4E-60 370.5 21.7 171 8-178 4-184 (317)
5 PLN02916 pectinesterase family 100.0 3.3E-55 7E-60 387.5 22.0 173 7-179 185-360 (502)
6 PLN02745 Putative pectinestera 100.0 3.7E-55 8.1E-60 395.3 22.1 175 5-179 281-455 (596)
7 PLN02990 Probable pectinestera 100.0 3.6E-55 7.8E-60 394.2 21.6 176 5-180 255-431 (572)
8 PLN02301 pectinesterase/pectin 100.0 3.5E-55 7.5E-60 392.0 21.3 175 6-180 233-407 (548)
9 PLN02217 probable pectinestera 100.0 3.4E-55 7.5E-60 397.8 21.3 175 6-180 247-421 (670)
10 PLN02713 Probable pectinestera 100.0 4E-55 8.7E-60 393.5 21.5 175 6-180 247-424 (566)
11 PLN02197 pectinesterase 100.0 5.3E-55 1.2E-59 393.1 21.6 175 5-179 271-447 (588)
12 PLN02484 probable pectinestera 100.0 5.3E-55 1.2E-59 394.0 21.3 176 5-180 268-444 (587)
13 PLN03043 Probable pectinestera 100.0 8.5E-55 1.8E-59 389.8 21.8 175 6-180 220-397 (538)
14 PLN02995 Probable pectinestera 100.0 8.1E-55 1.8E-59 389.7 21.2 173 7-179 221-395 (539)
15 PLN02304 probable pectinestera 100.0 1.3E-54 2.7E-59 372.3 21.4 172 7-178 73-249 (379)
16 PLN02170 probable pectinestera 100.0 9.1E-55 2E-59 386.2 20.8 174 6-179 222-396 (529)
17 PLN02416 probable pectinestera 100.0 8.1E-55 1.8E-59 389.8 20.4 174 6-179 227-400 (541)
18 PLN02176 putative pectinestera 100.0 2.3E-54 5E-59 367.5 22.2 172 3-178 33-210 (340)
19 PLN02506 putative pectinestera 100.0 1E-54 2.2E-59 388.6 21.0 174 6-179 229-402 (537)
20 PLN02314 pectinesterase 100.0 1.2E-54 2.6E-59 392.2 21.5 175 6-180 275-449 (586)
21 PLN02468 putative pectinestera 100.0 1.3E-54 2.7E-59 390.5 21.1 175 6-180 255-429 (565)
22 PLN02708 Probable pectinestera 100.0 1.9E-54 4E-59 388.6 21.3 172 6-177 238-411 (553)
23 PLN02682 pectinesterase family 100.0 3.1E-54 6.8E-59 369.5 21.7 170 9-178 69-250 (369)
24 PLN02665 pectinesterase family 100.0 2.4E-54 5.2E-59 370.5 20.9 170 9-179 68-242 (366)
25 PLN02432 putative pectinestera 100.0 4.8E-54 1E-58 359.7 21.8 167 8-179 10-176 (293)
26 PLN02313 Pectinesterase/pectin 100.0 2E-54 4.2E-59 390.7 20.9 175 6-180 272-446 (587)
27 PF01095 Pectinesterase: Pecti 100.0 1.8E-54 4E-59 364.6 19.2 171 10-180 1-171 (298)
28 PLN02634 probable pectinestera 100.0 8.3E-54 1.8E-58 365.4 21.2 171 8-178 55-236 (359)
29 PLN02671 pectinesterase 100.0 1E-53 2.2E-58 365.1 21.2 174 5-178 55-240 (359)
30 PLN02497 probable pectinestera 100.0 1.7E-53 3.7E-58 361.0 21.2 166 9-178 32-204 (331)
31 PLN02480 Probable pectinestera 100.0 6.6E-53 1.4E-57 359.5 22.2 171 6-179 45-220 (343)
32 PRK10531 acyl-CoA thioesterase 100.0 1.8E-51 3.9E-56 356.6 22.0 171 9-179 80-305 (422)
33 PLN02698 Probable pectinestera 100.0 4.4E-43 9.5E-48 311.9 15.8 143 6-179 211-353 (497)
34 COG4677 PemB Pectin methyleste 100.0 5.3E-42 1.2E-46 285.2 16.7 170 11-180 83-289 (405)
35 TIGR03805 beta_helix_1 paralle 99.7 1.4E-15 3E-20 129.5 17.1 135 24-176 1-150 (314)
36 TIGR03808 RR_plus_rpt_1 twin-a 99.3 5.7E-11 1.2E-15 104.3 15.3 121 22-159 55-180 (455)
37 PF07602 DUF1565: Protein of u 99.2 8.1E-10 1.7E-14 91.0 14.7 129 19-158 13-159 (246)
38 PF14592 Chondroitinas_B: Chon 99.1 2.8E-09 6E-14 93.5 12.6 121 22-159 5-145 (425)
39 COG3420 NosD Nitrous oxidase a 98.8 5.3E-08 1.1E-12 82.8 11.0 110 31-159 31-143 (408)
40 PF12708 Pectate_lyase_3: Pect 98.5 7.4E-06 1.6E-10 65.0 15.7 115 21-143 18-141 (225)
41 KOG1777 Putative Zn-finger pro 98.0 2.9E-05 6.3E-10 68.4 9.2 154 19-177 30-232 (625)
42 PLN03010 polygalacturonase 97.6 0.0044 9.6E-08 54.9 16.0 123 22-145 64-237 (409)
43 smart00656 Amb_all Amb_all dom 97.5 0.0045 9.8E-08 49.2 13.5 108 51-175 11-142 (190)
44 PLN02188 polygalacturonase/gly 97.5 0.0067 1.4E-07 53.7 15.0 150 23-175 55-277 (404)
45 PLN02671 pectinesterase 97.3 0.012 2.7E-07 51.2 14.1 82 87-176 177-269 (359)
46 PLN02793 Probable polygalactur 97.2 0.034 7.3E-07 49.8 16.3 71 94-164 184-278 (443)
47 PLN03003 Probable polygalactur 97.1 0.066 1.4E-06 48.1 17.1 70 94-163 145-238 (456)
48 PLN02218 polygalacturonase ADP 97.1 0.055 1.2E-06 48.3 16.6 71 94-164 199-293 (431)
49 PF01095 Pectinesterase: Pecti 97.0 0.0092 2E-07 50.7 10.9 84 87-178 106-203 (298)
50 PLN02634 probable pectinestera 97.0 0.018 3.8E-07 50.2 12.6 83 86-176 172-265 (359)
51 PLN02480 Probable pectinestera 96.9 0.03 6.6E-07 48.5 13.0 82 87-176 156-251 (343)
52 PF01696 Adeno_E1B_55K: Adenov 96.8 0.084 1.8E-06 46.3 14.8 128 23-176 56-204 (386)
53 PLN02773 pectinesterase 96.8 0.02 4.3E-07 49.1 10.8 83 87-177 121-212 (317)
54 PLN02176 putative pectinestera 96.7 0.019 4E-07 49.7 10.4 82 87-176 147-245 (340)
55 COG3866 PelB Pectate lyase [Ca 96.7 0.094 2E-06 44.7 14.2 93 59-165 101-207 (345)
56 PLN02708 Probable pectinestera 96.6 0.018 4E-07 52.9 10.2 83 86-176 348-448 (553)
57 PLN02497 probable pectinestera 96.5 0.029 6.3E-07 48.4 10.1 82 87-176 141-238 (331)
58 PLN02432 putative pectinestera 96.5 0.035 7.6E-07 47.1 10.4 82 87-176 112-204 (293)
59 PLN02665 pectinesterase family 96.5 0.078 1.7E-06 46.4 12.6 82 87-176 178-271 (366)
60 PF05048 NosD: Periplasmic cop 96.5 0.18 3.8E-06 40.7 14.0 81 90-177 60-144 (236)
61 PF00544 Pec_lyase_C: Pectate 96.3 0.034 7.4E-07 44.5 8.9 106 44-165 7-137 (200)
62 PLN02990 Probable pectinestera 96.3 0.035 7.6E-07 51.2 9.9 84 86-177 365-462 (572)
63 PLN02698 Probable pectinestera 96.3 0.043 9.2E-07 49.9 10.2 83 87-177 289-385 (497)
64 PLN02995 Probable pectinestera 96.2 0.037 8.1E-07 50.7 9.5 84 86-177 330-427 (539)
65 PLN02313 Pectinesterase/pectin 96.2 0.042 9.2E-07 50.8 9.8 83 86-176 380-476 (587)
66 PF13229 Beta_helix: Right han 96.1 0.028 6E-07 41.5 7.0 83 89-178 24-113 (158)
67 PLN02682 pectinesterase family 96.1 0.076 1.7E-06 46.5 10.5 82 87-176 187-279 (369)
68 PLN02488 probable pectinestera 96.1 0.09 1.9E-06 47.8 11.2 83 87-177 303-399 (509)
69 PLN02304 probable pectinestera 96.1 0.19 4.2E-06 44.1 12.9 82 87-176 186-286 (379)
70 PLN02217 probable pectinestera 96.0 0.063 1.4E-06 50.4 10.1 83 87-177 356-452 (670)
71 smart00722 CASH Domain present 96.0 0.38 8.2E-06 34.9 12.6 100 45-155 3-112 (146)
72 PLN02916 pectinesterase family 96.0 0.086 1.9E-06 47.9 10.6 84 86-177 295-392 (502)
73 PLN02197 pectinesterase 95.9 0.07 1.5E-06 49.4 10.0 84 86-177 382-480 (588)
74 PLN02170 probable pectinestera 95.9 0.085 1.8E-06 48.2 10.3 83 86-176 331-426 (529)
75 PLN02745 Putative pectinestera 95.8 0.095 2.1E-06 48.6 10.5 84 86-177 390-487 (596)
76 PLN02713 Probable pectinestera 95.8 0.081 1.7E-06 48.8 9.9 82 87-176 359-454 (566)
77 TIGR03805 beta_helix_1 paralle 95.8 0.41 8.9E-06 40.9 13.5 66 93-158 83-152 (314)
78 PLN02301 pectinesterase/pectin 95.7 0.1 2.2E-06 47.9 10.3 84 86-177 341-438 (548)
79 PLN02314 pectinesterase 95.7 0.1 2.3E-06 48.3 10.2 84 86-177 383-480 (586)
80 PLN02416 probable pectinestera 95.7 0.1 2.2E-06 48.0 9.9 84 86-177 335-432 (541)
81 PLN02155 polygalacturonase 95.6 1 2.2E-05 39.8 15.8 71 94-164 152-246 (394)
82 PLN02484 probable pectinestera 95.6 0.11 2.4E-06 48.1 10.0 83 86-176 378-474 (587)
83 PLN02506 putative pectinestera 95.6 0.1 2.2E-06 47.8 9.6 83 86-176 337-433 (537)
84 PLN03043 Probable pectinestera 95.5 0.14 3E-06 47.0 10.2 85 85-177 330-428 (538)
85 PLN02201 probable pectinestera 95.5 0.19 4E-06 46.0 10.9 83 86-176 311-407 (520)
86 PLN02468 putative pectinestera 95.5 0.15 3.2E-06 47.1 10.4 84 86-177 363-460 (565)
87 PLN02933 Probable pectinestera 95.0 0.26 5.7E-06 45.1 10.3 83 86-176 323-419 (530)
88 PF12541 DUF3737: Protein of u 94.8 0.96 2.1E-05 37.9 12.1 55 122-179 192-248 (277)
89 PF00295 Glyco_hydro_28: Glyco 94.5 0.21 4.6E-06 42.8 8.1 58 118-175 144-214 (326)
90 PLN02188 polygalacturonase/gly 94.5 0.61 1.3E-05 41.4 11.1 44 114-158 227-280 (404)
91 PF13229 Beta_helix: Right han 94.1 0.34 7.4E-06 35.5 7.5 74 96-176 54-136 (158)
92 PLN02218 polygalacturonase ADP 93.8 0.75 1.6E-05 41.2 10.3 64 94-158 222-317 (431)
93 PRK10531 acyl-CoA thioesterase 93.4 0.45 9.8E-06 42.4 8.1 63 115-177 197-283 (422)
94 TIGR03808 RR_plus_rpt_1 twin-a 93.0 3 6.4E-05 37.6 12.7 107 39-159 89-203 (455)
95 COG5434 PGU1 Endopygalactoruna 92.4 1.9 4E-05 39.7 10.8 81 93-176 267-368 (542)
96 PLN02793 Probable polygalactur 92.0 2 4.4E-05 38.6 10.5 65 94-159 207-303 (443)
97 PLN03003 Probable polygalactur 91.8 1.9 4.1E-05 38.9 10.0 63 94-157 168-262 (456)
98 PLN02155 polygalacturonase 91.7 2.1 4.5E-05 37.9 10.0 81 94-175 175-292 (394)
99 PLN03010 polygalacturonase 89.6 5.5 0.00012 35.4 10.9 64 94-158 187-282 (409)
100 PF00295 Glyco_hydro_28: Glyco 87.5 3.3 7.1E-05 35.5 7.9 83 88-176 92-185 (326)
101 PF03718 Glyco_hydro_49: Glyco 84.9 14 0.0003 34.2 10.6 76 95-175 328-411 (582)
102 PF12708 Pectate_lyase_3: Pect 80.9 15 0.00032 28.5 8.5 86 90-175 114-218 (225)
103 TIGR03804 para_beta_helix para 79.5 3.7 8E-05 24.1 3.6 24 122-145 6-29 (44)
104 COG4677 PemB Pectin methyleste 75.8 15 0.00033 31.9 7.4 86 90-177 215-319 (405)
105 COG5434 PGU1 Endopygalactoruna 73.6 5.4 0.00012 36.8 4.5 75 95-175 246-340 (542)
106 PF12541 DUF3737: Protein of u 55.8 1.1E+02 0.0024 25.8 8.6 26 148-174 197-222 (277)
107 PF05048 NosD: Periplasmic cop 55.2 1.1E+02 0.0023 24.4 14.9 36 122-157 108-144 (236)
108 PRK09752 adhesin; Provisional 54.5 2.6E+02 0.0056 28.7 12.3 69 88-158 113-193 (1250)
109 PF01696 Adeno_E1B_55K: Adenov 52.8 1.7E+02 0.0036 26.0 11.9 52 124-175 121-176 (386)
110 COG3866 PelB Pectate lyase [Ca 48.4 1.3E+02 0.0028 26.0 8.0 39 118-156 118-165 (345)
111 PF14592 Chondroitinas_B: Chon 46.8 1E+02 0.0022 27.7 7.5 32 114-145 213-244 (425)
112 PF03077 VacA2: Putative vacuo 46.3 49 0.0011 21.4 4.0 28 82-109 26-54 (60)
113 COG3420 NosD Nitrous oxidase a 41.2 1.3E+02 0.0028 26.5 7.0 64 116-179 69-143 (408)
114 smart00656 Amb_all Amb_all dom 40.4 1.8E+02 0.0039 22.8 7.6 35 123-157 39-81 (190)
115 smart00710 PbH1 Parallel beta- 36.1 49 0.0011 15.9 2.5 11 126-136 4-14 (26)
116 PF00544 Pec_lyase_C: Pectate 31.5 2.1E+02 0.0045 22.6 6.5 36 122-157 44-96 (200)
117 PF12421 DUF3672: Fibronectin 30.4 1E+02 0.0022 23.1 4.2 16 125-143 28-43 (136)
118 PF10662 PduV-EutP: Ethanolami 29.6 60 0.0013 24.6 2.9 46 7-53 1-52 (143)
119 TIGR01965 VCBS_repeat VCBS rep 28.4 1.5E+02 0.0033 21.0 4.6 58 10-76 28-89 (99)
120 PF06186 DUF992: Protein of un 28.1 63 0.0014 24.7 2.8 26 150-177 23-48 (146)
121 PF05342 Peptidase_M26_N: M26 26.2 72 0.0016 26.6 3.0 40 96-135 210-250 (250)
122 PF05772 NinB: NinB protein; 23.8 64 0.0014 24.0 2.1 23 23-45 10-32 (127)
123 COG0848 ExbD Biopolymer transp 21.1 1.3E+02 0.0029 22.5 3.4 12 21-32 81-92 (137)
124 PF06865 DUF1255: Protein of u 20.9 1.4E+02 0.003 21.1 3.2 30 38-67 24-60 (94)
125 PRK10579 hypothetical protein; 20.8 2.1E+02 0.0046 20.2 4.1 26 42-67 29-60 (94)
126 PF10055 DUF2292: Uncharacteri 20.6 1.4E+02 0.003 17.5 2.6 22 23-47 5-26 (38)
No 1
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3e-56 Score=392.84 Aligned_cols=173 Identities=46% Similarity=0.844 Sum_probs=167.7
Q ss_pred ccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCccc
Q 035494 7 IEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIY 86 (181)
Q Consensus 7 ~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~~ 86 (181)
.+++++|++||+|+|+|||+||+++|+++.+|++|+|+||+|+|+|.|++.|++|+|+|++.++|+|+++.+..+|.+++
T Consensus 195 ~~~~vvVa~dGsG~f~TIq~AI~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~nItliGdg~~~TiIt~n~~~~~g~~T~ 274 (509)
T PLN02488 195 KIADVVVAKDGSGKYNTVNAAIAAAPEHSRKRFVIYIKTGVYDEIVRIGSTKPNLTLIGDGQDSTIITGNLSASNGKRTF 274 (509)
T ss_pred ccccEEECCCCCCCccCHHHHHHhchhcCCCcEEEEEeCCeeEEEEEecCCCccEEEEecCCCceEEEEcccccCCCCce
Confidence 36899999999999999999999999988889999999999999999999999999999999999999998888888999
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEcccc
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDAA 166 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~~~ 166 (181)
.++||.+.+++|+++||+|+|++++..+||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+||||||+|+
T Consensus 275 ~SATv~v~g~gF~A~nitf~Ntag~~~~QAVALrv~~Dra~Fy~C~f~GyQDTLy~~~~RqyyrdC~I~GtVDFIFG~a~ 354 (509)
T PLN02488 275 YTATVASNGDGFIGIDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRIEGYQDALYPHRDRQFYRECFITGTVDFICGNAA 354 (509)
T ss_pred eeEEEEEEcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeeccCcceeeCCCCEEEEeeEEeeccceEecceE
Confidence 99999999999999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeEEEecCC
Q 035494 167 TIFQNCQIMVRKP 179 (181)
Q Consensus 167 ~~f~~c~i~~~~~ 179 (181)
++||+|+|++++|
T Consensus 355 avFq~C~I~sr~~ 367 (509)
T PLN02488 355 AVFQFCQIVARQP 367 (509)
T ss_pred EEEEccEEEEecC
Confidence 9999999999876
No 2
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=5.4e-56 Score=394.88 Aligned_cols=175 Identities=43% Similarity=0.793 Sum_probs=168.9
Q ss_pred CcccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCc
Q 035494 5 NKIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVN 84 (181)
Q Consensus 5 ~~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~ 84 (181)
+.++++++|++||+|+|+|||+||+++|.++..|++|+|+||+|+|+|.|++.+++|+|+|++.++|+|+++.+..+|.+
T Consensus 214 ~~~~~~~~Va~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~~itl~G~g~~~TiIt~~~~~~dg~~ 293 (530)
T PLN02933 214 QETNVNLSVAIDGTGNFTTINEAVSAAPNSSETRFIIYIKGGEYFENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWS 293 (530)
T ss_pred ccCcceEEECCCCCCCccCHHHHHHhchhcCCCcEEEEEcCceEEEEEEecCCCceEEEEEcCCCCcEEEeCCccCCCCc
Confidence 35778999999999999999999999999888899999999999999999999999999999999999999988888889
Q ss_pred ccceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEcc
Q 035494 85 IYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGD 164 (181)
Q Consensus 85 ~~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~ 164 (181)
++.++||.+.+++|+++||||+|++++..+||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+||||||+
T Consensus 294 T~~SaT~~v~a~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~QDTLy~~~~Rqyy~~C~IeGtVDFIFG~ 373 (530)
T PLN02933 294 TFQTATVGVKGKGFIAKDISFVNYAGPAKHQAVALRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGN 373 (530)
T ss_pred cccceEEEEECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEEeEEEecccccccCCCceEEEeeEEecccceeccC
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEeeEEEecCC
Q 035494 165 AATIFQNCQIMVRKP 179 (181)
Q Consensus 165 ~~~~f~~c~i~~~~~ 179 (181)
|+++||+|+|++++|
T Consensus 374 a~avFq~C~i~~~~~ 388 (530)
T PLN02933 374 AAVVFQNCSLYARKP 388 (530)
T ss_pred ceEEEeccEEEEecc
Confidence 999999999999865
No 3
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=6.6e-56 Score=394.31 Aligned_cols=174 Identities=45% Similarity=0.857 Sum_probs=168.3
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcc
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNI 85 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~ 85 (181)
.++++++|++||+|+|+|||+||+++|+++..|++|+|+||+|+|+|.|++++++|+|+|++.++|+|+++.+..+|+++
T Consensus 203 ~~~~~~~Va~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~T 282 (520)
T PLN02201 203 GVTPDVVVAADGTGNFTTIMDAVLAAPDYSTKRYVIYIKKGVYLENVEIKKKKWNIMMVGDGIDATVITGNRSFIDGWTT 282 (520)
T ss_pred CCCceEEEcCCCCCCccCHHHHHHhchhcCCCcEEEEEeCceeEEEEEecCCCceEEEEecCCCCcEEEeCCccCCCCcc
Confidence 46789999999999999999999999998889999999999999999999999999999999999999999888888999
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEccc
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDA 165 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~~ 165 (181)
+.++||.|.+++|+++||+|+|++++..+||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+||||||+|
T Consensus 283 ~~SAT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a 362 (520)
T PLN02201 283 FRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCAMRGYQDTLYTHTMRQFYRECRITGTVDFIFGDA 362 (520)
T ss_pred cceEEEEEECCCeEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeeeeccCCeeEeCCCCEEEEeeEEeecccEEecCc
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeeEEEecCC
Q 035494 166 ATIFQNCQIMVRKP 179 (181)
Q Consensus 166 ~~~f~~c~i~~~~~ 179 (181)
+++||+|+|++++|
T Consensus 363 ~avf~~C~i~~~~~ 376 (520)
T PLN02201 363 TAVFQNCQILAKKG 376 (520)
T ss_pred eEEEEccEEEEecC
Confidence 99999999999865
No 4
>PLN02773 pectinesterase
Probab=100.00 E-value=3e-55 Score=370.48 Aligned_cols=171 Identities=35% Similarity=0.648 Sum_probs=160.1
Q ss_pred cCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecC-------
Q 035494 8 EPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVA------- 80 (181)
Q Consensus 8 ~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~------- 80 (181)
+..|+|+++|+|+|+|||+||+++|.++.+|++|+|+||+|+|+|+|++.+++|||+|++.+.|+|+++....
T Consensus 4 ~~~i~Va~dGsGdf~TIq~Aida~P~~~~~~~~I~Ik~G~Y~E~V~I~~~k~~itl~G~~~~~TiI~~~~~a~~~~~~~~ 83 (317)
T PLN02773 4 RRVLRVAQDGSGDYCTVQDAIDAVPLCNRCRTVIRVAPGVYRQPVYVPKTKNLITLAGLSPEATVLTWNNTATKIDHHQA 83 (317)
T ss_pred ceEEEECCCCCCCccCHHHHHhhchhcCCceEEEEEeCceEEEEEEECcCCccEEEEeCCCCceEEEccCcccccccccc
Confidence 4579999999999999999999999988889999999999999999999889999999999999999775421
Q ss_pred ---CCCcccceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc
Q 035494 81 ---DGVNIYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT 157 (181)
Q Consensus 81 ---~g~~~~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~ 157 (181)
.|.+++.+++|.+.+++|+++||||+|+++...+||+||++.+||+.|++|+|+|+|||||++.+|+||++|+|||+
T Consensus 84 ~~~~g~gT~~SaTv~v~a~~f~a~nlT~~Nt~~~~~gQAvAl~v~gDr~~f~~c~~~G~QDTL~~~~gr~yf~~c~IeG~ 163 (317)
T PLN02773 84 SRVIGTGTFGCGTVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLRDCYIEGS 163 (317)
T ss_pred ccccCcCccCceEEEEECCCeEEEeeEEEeCCCCCCCcEEEEEecCccEEEEccEeecccceeEeCCCCEEEEeeEEeec
Confidence 24578899999999999999999999999877799999999999999999999999999999999999999999999
Q ss_pred eeeEEccccEEEEeeEEEecC
Q 035494 158 VDFIFGDAATIFQNCQIMVRK 178 (181)
Q Consensus 158 vDfi~G~~~~~f~~c~i~~~~ 178 (181)
||||||+|+++||+|+|+++.
T Consensus 164 VDFIFG~g~a~Fe~c~i~s~~ 184 (317)
T PLN02773 164 VDFIFGNSTALLEHCHIHCKS 184 (317)
T ss_pred ccEEeeccEEEEEeeEEEEcc
Confidence 999999999999999999874
No 5
>PLN02916 pectinesterase family protein
Probab=100.00 E-value=3.3e-55 Score=387.45 Aligned_cols=173 Identities=45% Similarity=0.874 Sum_probs=165.8
Q ss_pred ccCeEEEeCCCCCCcccHHHHHHhCCC---CCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCC
Q 035494 7 IEPHLIVAKDGSGNFTTISEALAAVPQ---KYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGV 83 (181)
Q Consensus 7 ~~~~i~V~~~g~g~f~TIq~Ai~aa~~---~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~ 83 (181)
++++++|++||+|+|+|||+||+++|+ ++..|++|+|+||+|+|+|.|++.+++|+|+|++.++|+|+++.+..+|.
T Consensus 185 ~~~~~vVa~dGsG~f~TIq~AI~a~P~~~~~~~~r~vI~Ik~GvY~E~V~I~~~k~~i~l~G~g~~~TiIt~~~~~~~g~ 264 (502)
T PLN02916 185 SRADFVVARDGSGTHRTINQALAALSRMGKSRTNRVIIYVKAGVYNEKVEIDRHMKNVMFVGDGMDKTIITNNRNVPDGS 264 (502)
T ss_pred CcccEEECCCCCCCccCHHHHHHhcccccCCCCceEEEEEeCceeeEEEEecCCCceEEEEecCCCCcEEEeCCccCCCC
Confidence 567999999999999999999999995 45779999999999999999999999999999999999999998877888
Q ss_pred cccceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEc
Q 035494 84 NIYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFG 163 (181)
Q Consensus 84 ~~~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G 163 (181)
+++.++||.+.+++|.++||||+|++++..+||+||++.+|+..|++|+|.|+|||||++.+||||++|+|+|+||||||
T Consensus 265 ~T~~SAT~~v~~~~F~A~nitf~Ntag~~~~QAVALrv~~D~a~fy~C~f~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG 344 (502)
T PLN02916 265 TTYSSATFGVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSVFYRCSFKGYQDTLFVHSLRQFYRDCHIYGTIDFIFG 344 (502)
T ss_pred cceeeEEEEEECCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEeccCceeEeCCCCEEEEecEEecccceecc
Confidence 89999999999999999999999999988899999999999999999999999999999999999999999999999999
Q ss_pred cccEEEEeeEEEecCC
Q 035494 164 DAATIFQNCQIMVRKP 179 (181)
Q Consensus 164 ~~~~~f~~c~i~~~~~ 179 (181)
+|+++||+|+|++++|
T Consensus 345 ~a~avFq~C~I~~~~~ 360 (502)
T PLN02916 345 DAAVVFQNCDIFVRRP 360 (502)
T ss_pred CceEEEecCEEEEecC
Confidence 9999999999999876
No 6
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3.7e-55 Score=395.27 Aligned_cols=175 Identities=69% Similarity=1.163 Sum_probs=169.0
Q ss_pred CcccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCc
Q 035494 5 NKIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVN 84 (181)
Q Consensus 5 ~~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~ 84 (181)
+.++++++|++||+|+|+|||+||+++|+++..|++|+|+||+|+|+|.|++.+++|+|+|++.++|+|+++.+..+|.+
T Consensus 281 ~~~~~~~~Va~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~ 360 (596)
T PLN02745 281 DALKPNATVAKDGSGNFTTISDALAAMPAKYEGRYVIYVKQGIYDETVTVDKKMVNVTMYGDGSQKTIVTGNKNFADGVR 360 (596)
T ss_pred cCccceEEECCCCCCCcccHHHHHHhccccCCceEEEEEeCCeeEEEEEEcCCCceEEEEecCCCceEEEECCcccCCCc
Confidence 45778999999999999999999999999988999999999999999999999999999999999999999988788899
Q ss_pred ccceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEcc
Q 035494 85 IYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGD 164 (181)
Q Consensus 85 ~~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~ 164 (181)
++.++||.+.+++|+++||+|+|++++..+||+||++.+|+..|++|+|.|+|||||++.+||||++|+|+|+||||||+
T Consensus 361 T~~saT~~v~~~~F~a~nitf~Ntag~~~~QAVAl~v~~Dr~~f~~c~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~ 440 (596)
T PLN02745 361 TFRTATFVALGEGFMAKSMGFRNTAGPEKHQAVAIRVQSDRSIFLNCRFEGYQDTLYAQTHRQFYRSCVITGTIDFIFGD 440 (596)
T ss_pred ceeeEEEEEEcCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeecccccccCCCcEEEEeeEEEeeccEEecc
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEeeEEEecCC
Q 035494 165 AATIFQNCQIMVRKP 179 (181)
Q Consensus 165 ~~~~f~~c~i~~~~~ 179 (181)
|+++||+|+|++++|
T Consensus 441 a~avf~~C~i~~~~~ 455 (596)
T PLN02745 441 AAAIFQNCLIFVRKP 455 (596)
T ss_pred eeEEEEecEEEEecC
Confidence 999999999999865
No 7
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3.6e-55 Score=394.20 Aligned_cols=176 Identities=47% Similarity=0.869 Sum_probs=168.1
Q ss_pred CcccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCC-C
Q 035494 5 NKIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADG-V 83 (181)
Q Consensus 5 ~~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g-~ 83 (181)
..++++++|++||+|+|+|||+||+++|+++..|++|+|+||+|+|+|.|++.+++|+|+|++.++|+|+++.+..+| .
T Consensus 255 ~~~~~~~~Va~dGsG~f~TIq~Av~a~p~~~~~r~vI~Ik~GvY~E~V~i~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~ 334 (572)
T PLN02990 255 GGVKANVVVAQDGSGQYKTINEALNAVPKANQKPFVIYIKQGVYNEKVDVTKKMTHVTFIGDGPTKTKITGSLNFYIGKV 334 (572)
T ss_pred cCCCceEEECCCCCCCCcCHHHHHhhCcccCCceEEEEEeCceeEEEEEecCCCCcEEEEecCCCceEEEeccccCCCCc
Confidence 457789999999999999999999999999889999999999999999999999999999999999999998776555 7
Q ss_pred cccceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEc
Q 035494 84 NIYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFG 163 (181)
Q Consensus 84 ~~~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G 163 (181)
+++.++||.+.+++|.++||||+|++++..+||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+||||||
T Consensus 335 ~T~~saT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG 414 (572)
T PLN02990 335 KTYLTATVAINGDHFTAKNIGFENTAGPEGHQAVALRVSADYAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFG 414 (572)
T ss_pred cceeeeEEEEEcCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEecccchhccCCCcEEEEeeEEecccceEcc
Confidence 89999999999999999999999999988899999999999999999999999999999999999999999999999999
Q ss_pred cccEEEEeeEEEecCCC
Q 035494 164 DAATIFQNCQIMVRKPL 180 (181)
Q Consensus 164 ~~~~~f~~c~i~~~~~~ 180 (181)
+|+++||+|+|++++|.
T Consensus 415 ~a~avf~~C~i~~~~~~ 431 (572)
T PLN02990 415 DAKVVLQNCNIVVRKPM 431 (572)
T ss_pred CceEEEEccEEEEecCC
Confidence 99999999999998764
No 8
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3.5e-55 Score=392.04 Aligned_cols=175 Identities=46% Similarity=0.875 Sum_probs=168.5
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcc
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNI 85 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~ 85 (181)
.++++++|++||+|+|+|||+||+++|+++.+|++|+|+||+|+|+|.|++.+++|+|+|++.++|+|+++.+..+|.++
T Consensus 233 ~~~~~~vVa~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~G~Y~E~V~i~~~k~~i~l~G~g~~~TiIt~~~~~~dg~~T 312 (548)
T PLN02301 233 NIKANVVVAKDGSGKYKTVKEAVASAPDNSKTRYVIYVKKGTYKENVEIGKKKKNLMLVGDGMDSTIITGSLNVIDGSTT 312 (548)
T ss_pred cCCccEEECCCCCCCcccHHHHHHhhhhcCCceEEEEEeCceeeEEEEecCCCceEEEEecCCCCcEEEeCCccCCCCCc
Confidence 46789999999999999999999999998888999999999999999999999999999999999999999887788889
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEccc
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDA 165 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~~ 165 (181)
++++||.+.+++|+++||+|+|++++.++||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+||||||+|
T Consensus 313 ~~SaT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a 392 (548)
T PLN02301 313 FRSATVAAVGDGFIAQDIWFQNTAGPEKHQAVALRVSADQAVINRCRIDAYQDTLYAHSLRQFYRDSYITGTVDFIFGNA 392 (548)
T ss_pred eeeEEEEEECCceEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeeeeccccceecCCcEEEEeeEEEeccceecccc
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeeEEEecCCC
Q 035494 166 ATIFQNCQIMVRKPL 180 (181)
Q Consensus 166 ~~~f~~c~i~~~~~~ 180 (181)
+++||+|+|++++|.
T Consensus 393 ~avfq~c~i~~~~~~ 407 (548)
T PLN02301 393 AVVFQNCKIVARKPM 407 (548)
T ss_pred eeEEeccEEEEecCC
Confidence 999999999999763
No 9
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3.4e-55 Score=397.82 Aligned_cols=175 Identities=49% Similarity=0.946 Sum_probs=169.1
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcc
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNI 85 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~ 85 (181)
.++++++|++||+|+|+|||+||+++|+++..|++|+|+||+|+|+|.|++.+++|+|+|++.++|+|+++....+|.++
T Consensus 247 ~~~~~~vVa~dGsG~f~TIq~Av~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~~i~l~Gdg~~~TiIt~~~~~~dg~~T 326 (670)
T PLN02217 247 EVKPDIVVAQDGSGQYKTINEALNFVPKKKNTTFVVHIKAGIYKEYVQVNRSMTHLVFIGDGPDKTVISGSKSYKDGITT 326 (670)
T ss_pred cCCccEEECCCCCCCccCHHHHHHhccccCCceEEEEEeCCceEEEEEEcCCCCcEEEEecCCCCeEEEcCCccCCCCCc
Confidence 46789999999999999999999999999889999999999999999999999999999999999999999887888999
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEccc
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDA 165 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~~ 165 (181)
++++||.|.+++|+++||+|+|++++.++||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+||||||++
T Consensus 327 ~~SAT~~v~g~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a 406 (670)
T PLN02217 327 YKTATVAIVGDHFIAKNIGFENTAGAIKHQAVAIRVLSDESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDA 406 (670)
T ss_pred cceEEEEEECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeeeccchhccCCCcEEEEeCEEEEeccEEecCc
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeeEEEecCCC
Q 035494 166 ATIFQNCQIMVRKPL 180 (181)
Q Consensus 166 ~~~f~~c~i~~~~~~ 180 (181)
+++||+|+|++++|.
T Consensus 407 ~avfq~C~I~~r~~~ 421 (670)
T PLN02217 407 AAVFQNCTLLVRKPL 421 (670)
T ss_pred eEEEEccEEEEccCC
Confidence 999999999998753
No 10
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=4e-55 Score=393.49 Aligned_cols=175 Identities=45% Similarity=0.841 Sum_probs=166.6
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCCCC---CCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCC
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVPQK---YEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADG 82 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~---~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g 82 (181)
++..+++|++||+|+|+|||+||+++|++ ..+|++|+|+||+|+|+|.|++.|++|+|+|++.++|+|+++.+..+|
T Consensus 247 ~~~~~~~Va~dGsG~f~TIq~Av~a~p~~~~~~~~~~vI~Ik~G~Y~E~V~i~~~k~~i~l~G~g~~~TiIt~~~~~~~g 326 (566)
T PLN02713 247 LVSDIVTVNQNGTGNFTTINDAVAAAPNNTDGSNGYFVIYVTAGVYEEYVSIPKNKKYLMMIGDGINQTVITGNRSVVDG 326 (566)
T ss_pred cCCceEEECCCCCCCCCCHHHHHHhhhcccCCCCceEEEEEcCcEEEEEEEecCCCceEEEEecCCCCcEEEcCCcccCC
Confidence 34457999999999999999999999986 467999999999999999999999999999999999999999888889
Q ss_pred CcccceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEE
Q 035494 83 VNIYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIF 162 (181)
Q Consensus 83 ~~~~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~ 162 (181)
+++++++||.|.+++|+++||||+|++++..+||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+|||||
T Consensus 327 ~~T~~SaT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIF 406 (566)
T PLN02713 327 WTTFNSATFAVVGQNFVAVNITFRNTAGPAKHQAVALRSGADLSTFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIF 406 (566)
T ss_pred CccccceeEEEECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeeccCCcceEECCCCEEEEeeEEecccceec
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEeeEEEecCCC
Q 035494 163 GDAATIFQNCQIMVRKPL 180 (181)
Q Consensus 163 G~~~~~f~~c~i~~~~~~ 180 (181)
|+|+++||+|+|++++|.
T Consensus 407 G~a~avfq~C~i~~~~~~ 424 (566)
T PLN02713 407 GNAAVVFQNCNLYPRLPM 424 (566)
T ss_pred ccceEEEeccEEEEecCC
Confidence 999999999999998763
No 11
>PLN02197 pectinesterase
Probab=100.00 E-value=5.3e-55 Score=393.10 Aligned_cols=175 Identities=46% Similarity=0.787 Sum_probs=167.5
Q ss_pred CcccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecC--CC
Q 035494 5 NKIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVA--DG 82 (181)
Q Consensus 5 ~~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~--~g 82 (181)
.+++++++|++||+|+|+|||+||+++|+++..|++|+|+||+|+|+|.|++.|++|+|+|++.++|+|+++.+.. +|
T Consensus 271 ~~~~~~~vVa~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E~V~I~~~k~ni~l~G~g~~~TiIt~~~~~~~~~g 350 (588)
T PLN02197 271 GKIKATHVVAKDGSGQFKTISQAVMACPDKNPGRCIIHIKAGIYNEQVTIPKKKNNIFMFGDGARKTVISYNRSVKLSPG 350 (588)
T ss_pred ccccccEEEcCCCCCCcCCHHHHHHhccccCCceEEEEEeCceEEEEEEccCCCceEEEEEcCCCCeEEEeccccccCCC
Confidence 3578899999999999999999999999998899999999999999999999999999999999999999987754 67
Q ss_pred CcccceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEE
Q 035494 83 VNIYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIF 162 (181)
Q Consensus 83 ~~~~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~ 162 (181)
.+++.++||.+.+++|+++||||+|++++.++||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+|||||
T Consensus 351 ~~T~~SaT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~GyQDTLy~~~~Rqyy~~C~I~GtVDFIF 430 (588)
T PLN02197 351 TTTSLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIF 430 (588)
T ss_pred CcccceeEEEEECCcEEEEEeEEEeCCCCCCCceEEEEecCCcEEEEEeEEEecCcceEecCCCEEEEeeEEEecccccc
Confidence 88999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEeeEEEecCC
Q 035494 163 GDAATIFQNCQIMVRKP 179 (181)
Q Consensus 163 G~~~~~f~~c~i~~~~~ 179 (181)
|+++++||+|+|+++++
T Consensus 431 G~a~avfq~C~i~~r~~ 447 (588)
T PLN02197 431 GKSATVIQNSLIVVRKG 447 (588)
T ss_pred cceeeeeecCEEEEecC
Confidence 99999999999999865
No 12
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=5.3e-55 Score=394.04 Aligned_cols=176 Identities=44% Similarity=0.827 Sum_probs=168.8
Q ss_pred CcccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEe-eEEEeccccCEEEEecCCCceEEEeeeecCCCC
Q 035494 5 NKIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEE-SVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGV 83 (181)
Q Consensus 5 ~~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E-~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~ 83 (181)
.+++++++|++||+|+|+|||+||+++|+++..|++|+|+||+|+| +|.|++.|++|+|+|++.++|+|+++....++.
T Consensus 268 ~~~~~~~vVa~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~G~Y~E~~v~i~~~k~ni~l~G~g~~~TiIt~~~~~~~~~ 347 (587)
T PLN02484 268 SAIQADIIVSKDGNGTFKTISEAIKKAPEHSSRRTIIYVKAGRYEENNLKVGRKKTNLMFIGDGKGKTVITGGKSIFDNL 347 (587)
T ss_pred ccCCceEEECCCCCCCcccHHHHHHhccccCCCcEEEEEeCCEEEEEEEEECCCCceEEEEecCCCCeEEecCCcccCCC
Confidence 3577899999999999999999999999998899999999999999 599999999999999999999999998777888
Q ss_pred cccceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEc
Q 035494 84 NIYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFG 163 (181)
Q Consensus 84 ~~~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G 163 (181)
+++.++||.+.+++|+++||+|+|++++..+||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+||||||
T Consensus 348 ~t~~saT~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG 427 (587)
T PLN02484 348 TTFHTASFAATGAGFIARDMTFENWAGPAKHQAVALRVGADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFG 427 (587)
T ss_pred cccceEEEEEEcCCEEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeEeccCcccccCCCcEEEEecEEEeccceecc
Confidence 99999999999999999999999999988899999999999999999999999999999999999999999999999999
Q ss_pred cccEEEEeeEEEecCCC
Q 035494 164 DAATIFQNCQIMVRKPL 180 (181)
Q Consensus 164 ~~~~~f~~c~i~~~~~~ 180 (181)
+|+++||+|+|++++|.
T Consensus 428 ~a~avfq~C~i~~~~~~ 444 (587)
T PLN02484 428 NAAVVLQNCSIYARKPM 444 (587)
T ss_pred cceeEEeccEEEEecCC
Confidence 99999999999998763
No 13
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=100.00 E-value=8.5e-55 Score=389.75 Aligned_cols=175 Identities=48% Similarity=0.845 Sum_probs=167.3
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCCCCC---CceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCC
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVPQKY---EGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADG 82 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~---~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g 82 (181)
+++++++|++||+|+|+|||+||+++|... ..|++|+|++|+|+|+|.|++.|++|+|+|++.++|+|+++.+..+|
T Consensus 220 ~~~~~~vVa~dGsG~f~TI~~Av~a~p~~~~~~~~r~vI~vk~G~Y~E~V~i~~~k~~i~l~G~g~~~tiIt~~~~~~dg 299 (538)
T PLN03043 220 LVSDAVIVGPYGTDNFTTITDAIAAAPNNSKPEDGYFVIYAREGYYEEYVVVPKNKKNIMLIGDGINKTIITGNHSVVDG 299 (538)
T ss_pred ccCccEEECCCCCCCCcCHHHHHHhccccCCCCcceEEEEEcCeeeEEEEEeCCCCCcEEEEecCCCCeEEEeCCccCCC
Confidence 455899999999999999999999999874 35899999999999999999999999999999999999999888889
Q ss_pred CcccceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEE
Q 035494 83 VNIYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIF 162 (181)
Q Consensus 83 ~~~~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~ 162 (181)
++++.++||.+.+++|+++||+|+|++++..+||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+|||||
T Consensus 300 ~~T~~saT~~v~~~~F~a~~it~~Ntag~~~~QAvAlrv~~D~~~f~~C~~~gyQDTLy~~~~rq~y~~c~I~GtVDFIF 379 (538)
T PLN03043 300 WTTFNSSTFAVSGERFVAVDVTFRNTAGPEKHQAVALRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIF 379 (538)
T ss_pred CccccceEEEEECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeccCcccccCCCcEEEEeeEEeeccceEe
Confidence 99999999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEeeEEEecCCC
Q 035494 163 GDAATIFQNCQIMVRKPL 180 (181)
Q Consensus 163 G~~~~~f~~c~i~~~~~~ 180 (181)
|+++++||+|+|++++|.
T Consensus 380 G~a~avfq~c~i~~r~~~ 397 (538)
T PLN03043 380 GNAAAIFQNCNLYARKPM 397 (538)
T ss_pred ecceeeeeccEEEEecCC
Confidence 999999999999998763
No 14
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=8.1e-55 Score=389.66 Aligned_cols=173 Identities=45% Similarity=0.833 Sum_probs=165.5
Q ss_pred ccCeEEEeCCCCCCcccHHHHHHhCCCC--CCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCc
Q 035494 7 IEPHLIVAKDGSGNFTTISEALAAVPQK--YEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVN 84 (181)
Q Consensus 7 ~~~~i~V~~~g~g~f~TIq~Ai~aa~~~--~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~ 84 (181)
++++++|++||+|+|+|||+||+++|.. +..|++|+|+||+|+|+|.|++.|++|+|+|++.++|+|+++.+..++.+
T Consensus 221 ~~~~~~Va~dGsG~f~TIq~Ai~a~p~~~~~~~r~vI~Ik~G~Y~E~V~i~~~k~~i~l~G~g~~~TvIt~~~~~~~~~~ 300 (539)
T PLN02995 221 VRANLVVAKDGSGHFNTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENINVRLNNDDIMLVGDGMRSTIITGGRSVKGGYT 300 (539)
T ss_pred CCCcEEECCCCCCCccCHHHHHHhcccccCCCceEEEEEeCCEeEEEEEecCCCCcEEEEEcCCCCeEEEeCCccCCCCc
Confidence 6689999999999999999999999963 57799999999999999999999999999999999999999987777888
Q ss_pred ccceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEcc
Q 035494 85 IYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGD 164 (181)
Q Consensus 85 ~~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~ 164 (181)
++.++||.|.+++|+++||||+|++++..+||+||++.+|+..|++|+|.|+|||||++.+||||++|+|+|+||||||+
T Consensus 301 T~~SaT~~v~~~~F~a~nitf~Ntag~~~~QAVAlrv~~Dr~~f~~c~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~ 380 (539)
T PLN02995 301 TYNSATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGN 380 (539)
T ss_pred ccceEEEEEECCCeEEEeeEEEeCCCCCCCceEEEEEcCCceeEEcceEecccchhccCCCceEEEeeEEeeccceEecc
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEeeEEEecCC
Q 035494 165 AATIFQNCQIMVRKP 179 (181)
Q Consensus 165 ~~~~f~~c~i~~~~~ 179 (181)
|+++||+|+|++++|
T Consensus 381 a~avf~~C~i~~~~~ 395 (539)
T PLN02995 381 AAAVFQNCIILPRRP 395 (539)
T ss_pred cceEEeccEEEEecC
Confidence 999999999999865
No 15
>PLN02304 probable pectinesterase
Probab=100.00 E-value=1.3e-54 Score=372.32 Aligned_cols=172 Identities=32% Similarity=0.583 Sum_probs=161.4
Q ss_pred ccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCccc
Q 035494 7 IEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIY 86 (181)
Q Consensus 7 ~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~~ 86 (181)
....++|+++|+|+|+|||+||+++|+++.+|++|+|+||+|+|+|+|+++|++|||+|++.+.|+|+++.....+.+++
T Consensus 73 ~~~~i~Va~dGsGdf~TIQ~AIdavP~~~~~r~vI~Ik~GvY~EkV~Ip~~K~~Itl~G~g~~~TiIt~~~~a~~~~gT~ 152 (379)
T PLN02304 73 TTSILCVDPNGCCNFTTVQSAVDAVGNFSQKRNVIWINSGIYYEKVTVPKTKPNITFQGQGFDSTAIAWNDTAKSANGTF 152 (379)
T ss_pred cceEEEECCCCCCCccCHHHHHhhCcccCCCcEEEEEeCeEeEEEEEECCCCCcEEEEecCCCCcEEEccCcccCCCCcc
Confidence 34678999999999999999999999988899999999999999999999999999999999999999987655556889
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCC-----CCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeE
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAG-----PENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFI 161 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~-----~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi 161 (181)
.+++|.+.+++|+++||||+|+++ +..+||+||++.+|+..|++|+|+|+|||||...+|+||++|+|+|+||||
T Consensus 153 ~SaTv~v~a~~F~a~nITf~Nta~~~~~g~~~~QAVAL~v~gDra~fy~C~f~G~QDTLy~~~gR~Yf~~CyIeG~VDFI 232 (379)
T PLN02304 153 YSASVQVFASNFIAKNISFMNVAPIPKPGDVGAQAVAIRIAGDQAAFWGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFI 232 (379)
T ss_pred ceEEEEEECCCeEEEeeEEEecCCCCCCCCCCccEEEEEecCCcEEEEeceEecccceeEeCCCCEEEEeeEEcccccEE
Confidence 999999999999999999999983 346899999999999999999999999999999999999999999999999
Q ss_pred EccccEEEEeeEEEecC
Q 035494 162 FGDAATIFQNCQIMVRK 178 (181)
Q Consensus 162 ~G~~~~~f~~c~i~~~~ 178 (181)
||+|+++||+|+|+++.
T Consensus 233 FG~g~A~Fe~C~I~s~~ 249 (379)
T PLN02304 233 FGDARSLYENCRLISMA 249 (379)
T ss_pred eccceEEEEccEEEEec
Confidence 99999999999999863
No 16
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=9.1e-55 Score=386.18 Aligned_cols=174 Identities=43% Similarity=0.791 Sum_probs=165.9
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCC-CCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCc
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVP-QKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVN 84 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~-~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~ 84 (181)
.++++++|++||+|+|+|||+||+++| +++..|++|+|+||+|+|+|.|++.|++|+|+|++.++|+|+++....+|.+
T Consensus 222 ~~~~~~vVa~dGsG~f~TIq~AI~a~~~~~~~~r~vI~Ik~GvY~E~V~I~~~k~nItl~G~g~~~TiIt~~~~~~~g~~ 301 (529)
T PLN02170 222 ELKVHAVVAADGSGTHKTIGEALLSTSLESGGGRTVIYLKAGTYHENLNIPTKQKNVMLVGDGKGKTVIVGSRSNRGGWT 301 (529)
T ss_pred cCcccEEEcCCCCCchhhHHHHHHhcccccCCceEEEEEeCCeeEEEEecCCCCceEEEEEcCCCCeEEEeCCcCCCCCc
Confidence 467899999999999999999999865 5667899999999999999999999999999999999999999987778889
Q ss_pred ccceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEcc
Q 035494 85 IYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGD 164 (181)
Q Consensus 85 ~~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~ 164 (181)
++.++||.+.+++|+++||+|+|++++..+||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+||||||+
T Consensus 302 T~~SaTv~v~~~~F~a~nitf~Ntag~~~~QAVALrv~gDr~~fy~C~f~GyQDTLy~~~~Rqyy~~C~I~GtVDFIFG~ 381 (529)
T PLN02170 302 TYQTATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDKSVVYRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGN 381 (529)
T ss_pred cccceEEEEEcCCeEEEeeEEEecCCCCCCceEEEEecCCcEEEEeeeEeccCCcceeCCCCEEEEeeEEccccceeccc
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEeeEEEecCC
Q 035494 165 AATIFQNCQIMVRKP 179 (181)
Q Consensus 165 ~~~~f~~c~i~~~~~ 179 (181)
|+++||+|+|++++|
T Consensus 382 a~avFq~C~I~~~~~ 396 (529)
T PLN02170 382 SAVVFQSCNIAARKP 396 (529)
T ss_pred ceEEEeccEEEEecC
Confidence 999999999999865
No 17
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=8.1e-55 Score=389.82 Aligned_cols=174 Identities=41% Similarity=0.799 Sum_probs=167.0
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcc
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNI 85 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~ 85 (181)
++...++|++||+|+|+|||+||+++|.++.+|++|+|+||+|+|+|.|++.+++|+|+|++.++|+|+++.+..+|+++
T Consensus 227 ~~~~~ivVa~dGsG~f~TIq~Ai~a~p~~~~~r~vI~Ik~GvY~E~V~i~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~T 306 (541)
T PLN02416 227 DPSEVLVVAADGTGNFSTITDAINFAPNNSNDRIIIYVREGVYEENVEIPIYKTNIVLIGDGSDVTFITGNRSVVDGWTT 306 (541)
T ss_pred CCCceEEECCCCCCCccCHHHHHHhhhhcCCceEEEEEeCceeEEEEecCCCCccEEEEecCCCceEEeCCCccCCCCCc
Confidence 34456999999999999999999999998889999999999999999999999999999999999999999888888899
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEccc
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDA 165 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~~ 165 (181)
++++||.+.+++|+++||+|+|++++.++||+||++.+|+..|++|+|.|+|||||++.+||||++|+|+|+||||||+|
T Consensus 307 ~~saT~~v~~~~F~a~nitf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a 386 (541)
T PLN02416 307 FRSATLAVSGEGFLARDITIENTAGPEKHQAVALRVNADLVALYRCTINGYQDTLYVHSFRQFYRECDIYGTIDYIFGNA 386 (541)
T ss_pred cceEEEEEECCCeEEEeeEEEECCCCCCCceEEEEEcCccEEEEcceEecccchhccCCCceEEEeeEEeeccceeeccc
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeeEEEecCC
Q 035494 166 ATIFQNCQIMVRKP 179 (181)
Q Consensus 166 ~~~f~~c~i~~~~~ 179 (181)
+++||+|+|++++|
T Consensus 387 ~avfq~c~i~~~~~ 400 (541)
T PLN02416 387 AVVFQACNIVSKMP 400 (541)
T ss_pred eEEEeccEEEEecC
Confidence 99999999999865
No 18
>PLN02176 putative pectinesterase
Probab=100.00 E-value=2.3e-54 Score=367.50 Aligned_cols=172 Identities=27% Similarity=0.550 Sum_probs=159.1
Q ss_pred ccCcccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCC
Q 035494 3 ENNKIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADG 82 (181)
Q Consensus 3 ~~~~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g 82 (181)
...++.++++|++||+|+|+|||+||+++|+++.+|++|+|+||+|+|+|+|+++|++|||+|++.+.|+|+++..
T Consensus 33 ~~~~~~~~i~Va~dGsGdf~TIq~AIdavP~~~~~~~~I~Ik~GvY~EkV~Ip~~k~~vtl~G~g~~~TiIt~~~~---- 108 (340)
T PLN02176 33 ASSQIAKTIIVNPNDARYFKTVQSAIDSIPLQNQNWIRILIQNGIYREKVTIPKEKGYIYMQGKGIEKTIIAYGDH---- 108 (340)
T ss_pred cccccCceEEECCCCCCCccCHHHHHhhchhcCCceEEEEECCcEEEEEEEECCCCccEEEEEcCCCceEEEEeCC----
Confidence 3456778999999999999999999999999888899999999999999999999999999999999999997643
Q ss_pred CcccceeEEEEecCCEEEEEeEEEeCCCC------CCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEec
Q 035494 83 VNIYDAATFVAIGEGLFAKSMGFRNIAGP------ENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITG 156 (181)
Q Consensus 83 ~~~~~~a~~~v~~~~~~~~nlti~N~~~~------~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G 156 (181)
.++..++||.+.+++|+++||||+|+++. ..+||+||++.+||..|++|+|+|+|||||++.+||||++|+|||
T Consensus 109 ~~t~~saT~~v~a~~F~a~nlT~~Nt~~~~~~~~~~~~QAVAl~v~gDr~~f~~C~f~G~QDTLy~~~gRqyf~~CyIeG 188 (340)
T PLN02176 109 QATDTSATFTSYASNIIITGITFKNTYNIASNSSRPTKPAVAARMLGDKYAIIDSSFDGFQDTLFDGKGRHYYKRCVISG 188 (340)
T ss_pred cccccceEEEEECCCEEEEeeEEEeCCCccCCCCCCccceEEEEecCccEEEEccEEecccceeEeCCcCEEEEecEEEe
Confidence 24567899999999999999999999862 247999999999999999999999999999999999999999999
Q ss_pred ceeeEEccccEEEEeeEEEecC
Q 035494 157 TVDFIFGDAATIFQNCQIMVRK 178 (181)
Q Consensus 157 ~vDfi~G~~~~~f~~c~i~~~~ 178 (181)
+||||||+|+++||+|+|+++.
T Consensus 189 ~VDFIFG~a~a~Fe~C~I~s~~ 210 (340)
T PLN02176 189 GIDFIFGYAQSIFEGCTLKLTL 210 (340)
T ss_pred cccEEecCceEEEeccEEEEec
Confidence 9999999999999999999873
No 19
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1e-54 Score=388.59 Aligned_cols=174 Identities=40% Similarity=0.828 Sum_probs=168.3
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcc
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNI 85 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~ 85 (181)
.++++++|++||+|+|+|||+||+++|.++.+|++|+|+||+|+|+|.|++.+++|+|+|++.++|+|+++.+..+|.++
T Consensus 229 ~~~~~~~Va~dGsG~f~TIq~Av~a~p~~~~~r~vI~Vk~GvY~E~V~I~~~k~~i~l~G~g~~~tiIt~~~~~~~g~~T 308 (537)
T PLN02506 229 GMHVDTIVALDGSGHYRTITEAINEAPNHSNRRYIIYVKKGVYKENIDMKKKKTNIMLVGDGIGQTVVTGNRNFMQGWTT 308 (537)
T ss_pred cCCceEEECCCCCCCccCHHHHHHhchhcCCCcEEEEEeCCeeeEEEeccCCCceEEEEEcCCCCeEEEeCccccCCCCc
Confidence 46789999999999999999999999998889999999999999999999999999999999999999999887788899
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEccc
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDA 165 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~~ 165 (181)
+.++||.+.+++|+++||+|+|++++..+||+||++.+|+..|++|+|.|+|||||++.+||||++|+|+|+||||||+|
T Consensus 309 ~~saT~~v~~~~F~a~nit~~Ntag~~~~QAVAl~v~~D~~~fy~C~~~G~QDTLy~~~~rqyy~~C~I~GtVDFIFG~a 388 (537)
T PLN02506 309 FRTATVAVSGRGFIARDITFRNTAGPQNHQAVALRVDSDQSAFYRCSMEGYQDTLYAHSLRQFYRECEIYGTIDFIFGNG 388 (537)
T ss_pred ccceEEEEEcCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeecccccceecCCceEEEeeEEecccceEccCc
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeeEEEecCC
Q 035494 166 ATIFQNCQIMVRKP 179 (181)
Q Consensus 166 ~~~f~~c~i~~~~~ 179 (181)
+++||+|+|++++|
T Consensus 389 ~avfq~C~i~~r~~ 402 (537)
T PLN02506 389 AAVLQNCKIYTRVP 402 (537)
T ss_pred eeEEeccEEEEccC
Confidence 99999999999865
No 20
>PLN02314 pectinesterase
Probab=100.00 E-value=1.2e-54 Score=392.24 Aligned_cols=175 Identities=49% Similarity=0.854 Sum_probs=168.9
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcc
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNI 85 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~ 85 (181)
.++++++|++||+|+|+|||+||+++|.++.+|++|+|+||+|+|+|.|++.+++|+|+|++.++|+|+++.+..+|..+
T Consensus 275 ~~~~~~~Va~dGsg~f~TI~~Av~a~p~~~~~r~vI~ik~G~Y~E~V~i~~~k~~i~l~G~g~~~tiIt~~~~~~~g~~t 354 (586)
T PLN02314 275 KPTPNVTVAKDGSGDVKTINEAVASIPKKSKSRFVIYVKEGTYVENVLLDKSKWNVMIYGDGKDKTIISGSLNFVDGTPT 354 (586)
T ss_pred CCCccEEECCCCCCCccCHHHHHhhccccCCceEEEEEcCceEEEEEEecCCCceEEEEecCCCCcEEEecCCcCCCCCc
Confidence 47789999999999999999999999999889999999999999999999999999999999999999998888888889
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEccc
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDA 165 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~~ 165 (181)
+.++||.+.+++|+++||+|+|++++.++||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+||||||+|
T Consensus 355 ~~saT~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~f~~c~~~G~QDTLy~~~~rq~y~~C~I~GtvDFIFG~a 434 (586)
T PLN02314 355 FSTATFAAAGKGFIAKDMGFINTAGAAKHQAVAFRSGSDMSVFYQCSFDAFQDTLYAHSNRQFYRDCDITGTIDFIFGNA 434 (586)
T ss_pred cceEEEEEEcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeEEEeccchheeCCCCEEEEeeEEEeccceeccCc
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeeEEEecCCC
Q 035494 166 ATIFQNCQIMVRKPL 180 (181)
Q Consensus 166 ~~~f~~c~i~~~~~~ 180 (181)
+++||+|+|++++|.
T Consensus 435 ~avf~~c~i~~~~~~ 449 (586)
T PLN02314 435 AVVFQNCNIQPRQPL 449 (586)
T ss_pred eeeeeccEEEEecCC
Confidence 999999999999763
No 21
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.3e-54 Score=390.49 Aligned_cols=175 Identities=45% Similarity=0.850 Sum_probs=168.8
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcc
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNI 85 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~ 85 (181)
+++++++|++||+|+|+|||+||+++|.++.+|++|+|+||+|+|+|.|++.+++|+|+|++.++++|+++.+..+|..+
T Consensus 255 ~~~~~~~Va~dGsg~f~tI~~Av~a~p~~~~~~~vI~ik~GvY~E~V~i~~~k~~i~~~G~g~~~tiIt~~~~~~dg~~t 334 (565)
T PLN02468 255 KKKADIVVAKDGSGKYKTISEALKDVPEKSEKRTIIYVKKGVYFENVRVEKKKWNVVMVGDGMSKTIVSGSLNFVDGTPT 334 (565)
T ss_pred cCCCcEEECCCCCCCccCHHHHHHhchhcCCCcEEEEEeCCceEEEEEecCCCCeEEEEecCCCCCEEEeCCccCCCCCc
Confidence 46789999999999999999999999998889999999999999999999999999999999999999999887888889
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEccc
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDA 165 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~~ 165 (181)
+.++||.+.+++|+++||+|+|++++.++||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+||||||+|
T Consensus 335 ~~saT~~v~~~~f~a~~itf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~QDTLy~~~~rq~y~~C~I~GtvDFIFG~a 414 (565)
T PLN02468 335 FSTATFAVFGKGFMARDMGFRNTAGPIKHQAVALMSSADLSVFYRCTMDAFQDTLYAHAQRQFYRECNIYGTVDFIFGNS 414 (565)
T ss_pred cceeeeeEECCCeEEEEEEEEeCCCCCCCceEEEEEcCCcEEEEEeEEEeccchhccCCCceEEEeeEEecccceeeccc
Confidence 99999999999999999999999999899999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeeEEEecCCC
Q 035494 166 ATIFQNCQIMVRKPL 180 (181)
Q Consensus 166 ~~~f~~c~i~~~~~~ 180 (181)
+++||+|+|++++|.
T Consensus 415 ~avfq~c~i~~~~~~ 429 (565)
T PLN02468 415 AVVFQNCNILPRRPM 429 (565)
T ss_pred eEEEeccEEEEecCC
Confidence 999999999999763
No 22
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.9e-54 Score=388.61 Aligned_cols=172 Identities=39% Similarity=0.770 Sum_probs=164.9
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCCCC-CCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecC-CCC
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVPQK-YEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVA-DGV 83 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~-~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~-~g~ 83 (181)
.++++++|++||+|+|+|||+||+++|+. ..+|++|+|+||+|+|+|.|++.|++|+|+|++.++|+|+++.+.. +|+
T Consensus 238 ~~~~~~~Va~dGsg~f~TIq~Av~a~p~~~~~~r~vI~vk~GvY~E~V~i~~~k~~v~l~G~g~~~TiIt~~~~~~~~g~ 317 (553)
T PLN02708 238 GLTPDVTVCKDGNCCYKTVQEAVNAAPDNNGDRKFVIRIKEGVYEETVRVPLEKKNVVFLGDGMGKTVITGSLNVGQPGI 317 (553)
T ss_pred cCCccEEECCCCCCCccCHHHHHHhhhhccCCccEEEEEeCceEEeeeeecCCCccEEEEecCCCceEEEecCccCCCCc
Confidence 47789999999999999999999999994 5789999999999999999999999999999999999999988764 678
Q ss_pred cccceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEc
Q 035494 84 NIYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFG 163 (181)
Q Consensus 84 ~~~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G 163 (181)
+++.++||.+.+++|+++||||+|++++..+||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+||||||
T Consensus 318 ~T~~saT~~v~~~~f~a~~it~~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~QDTLy~~~~rq~y~~C~I~GtVDFIFG 397 (553)
T PLN02708 318 STYNTATVGVLGDGFMARDLTIQNTAGPDAHQAVAFRSDSDLSVIENCEFLGNQDTLYAHSLRQFYKSCRIQGNVDFIFG 397 (553)
T ss_pred CccceEEEEEEcCCeEEEeeEEEcCCCCCCCceEEEEecCCcEEEEeeeeeeccccceeCCCceEEEeeEEeecCCEEec
Confidence 89999999999999999999999999988899999999999999999999999999999999999999999999999999
Q ss_pred cccEEEEeeEEEec
Q 035494 164 DAATIFQNCQIMVR 177 (181)
Q Consensus 164 ~~~~~f~~c~i~~~ 177 (181)
+|+++||+|+|+++
T Consensus 398 ~a~avfq~c~i~~~ 411 (553)
T PLN02708 398 NSAAVFQDCAILIA 411 (553)
T ss_pred CceEEEEccEEEEe
Confidence 99999999999987
No 23
>PLN02682 pectinesterase family protein
Probab=100.00 E-value=3.1e-54 Score=369.47 Aligned_cols=170 Identities=32% Similarity=0.600 Sum_probs=157.4
Q ss_pred CeEEEeC-CCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecC----CC-
Q 035494 9 PHLIVAK-DGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVA----DG- 82 (181)
Q Consensus 9 ~~i~V~~-~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~----~g- 82 (181)
.+++|++ +|+|+|+|||+||+++|.++..|++|+|+||+|+|+|.|++.|++|||+|++.++|+|+++.... +|
T Consensus 69 ~~i~V~~~~gsGdf~TIQ~AIdavP~~~~~r~vI~Ik~G~Y~EkV~Ip~~k~~Itl~G~g~~~TiIt~~~~a~~~~~~g~ 148 (369)
T PLN02682 69 YTIVVDKKPAAGDFTTIQAAIDSLPVINLVRVVIKVNAGTYREKVNIPPLKAYITLEGAGADKTIIQWGDTADTPGPGGR 148 (369)
T ss_pred eEEEEeCCCCCCCccCHHHHHhhccccCCceEEEEEeCceeeEEEEEeccCceEEEEecCCCccEEEeccccCccCCCCC
Confidence 4699999 58899999999999999988889999999999999999999899999999999999999875432 22
Q ss_pred -CcccceeEEEEecCCEEEEEeEEEeCCC-----CCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEec
Q 035494 83 -VNIYDAATFVAIGEGLFAKSMGFRNIAG-----PENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITG 156 (181)
Q Consensus 83 -~~~~~~a~~~v~~~~~~~~nlti~N~~~-----~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G 156 (181)
++++.+++|.+.+++|+++||||+|+++ ...+||+||++.+|+..|++|+|+|+|||||.+.+||||++|+|||
T Consensus 149 ~~gT~~SAT~~v~a~~F~a~nlTf~Nt~~~~~~g~~g~QAVAL~v~gDr~~fy~C~f~G~QDTLy~~~gRqyf~~C~IeG 228 (369)
T PLN02682 149 PLGTYGSATFAVNSPYFIAKNITFKNTAPVPPPGALGKQAVALRISADTAAFYGCKFLGAQDTLYDHLGRHYFKDCYIEG 228 (369)
T ss_pred ccccccceEEEEECCCeEEEeeEEEcccccCCCCCCcccEEEEEecCCcEEEEcceEeccccceEECCCCEEEEeeEEcc
Confidence 5789999999999999999999999984 3468999999999999999999999999999999999999999999
Q ss_pred ceeeEEccccEEEEeeEEEecC
Q 035494 157 TVDFIFGDAATIFQNCQIMVRK 178 (181)
Q Consensus 157 ~vDfi~G~~~~~f~~c~i~~~~ 178 (181)
+||||||+|.++||+|+|+++.
T Consensus 229 ~VDFIFG~g~a~Fe~C~I~s~~ 250 (369)
T PLN02682 229 SVDFIFGNGLSLYEGCHLHAIA 250 (369)
T ss_pred cccEEecCceEEEEccEEEEec
Confidence 9999999999999999999864
No 24
>PLN02665 pectinesterase family protein
Probab=100.00 E-value=2.4e-54 Score=370.47 Aligned_cols=170 Identities=30% Similarity=0.548 Sum_probs=159.6
Q ss_pred CeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcccce
Q 035494 9 PHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIYDA 88 (181)
Q Consensus 9 ~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~~~~ 88 (181)
..++|+++|+|+|+|||+||+++|+++.+|++|+|+||+|+|+|.|+++||+|||+|++.+.++|+++.+ ....++..+
T Consensus 68 ~~i~V~~dG~Gdf~TIq~AIdaiP~~~~~r~vI~Ik~GvY~EkV~Ip~~kp~Itl~G~~~~~tiIt~~~~-a~~~gT~~S 146 (366)
T PLN02665 68 RIIKVRKDGSGDFKTITDAIKSIPAGNTQRVIIDIGPGEYNEKITIDRSKPFVTLYGSPGAMPTLTFDGT-AAKYGTVYS 146 (366)
T ss_pred eEEEEcCCCCCCccCHHHHHhhCcccCCceEEEEEeCcEEEEEEEecCCCCEEEEEecCCCCCEEEECCc-cCCCCCcce
Confidence 6799999999999999999999999988999999999999999999999999999999999999999865 345678899
Q ss_pred eEEEEecCCEEEEEeEEEeCCCC-----CCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEc
Q 035494 89 ATFVAIGEGLFAKSMGFRNIAGP-----ENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFG 163 (181)
Q Consensus 89 a~~~v~~~~~~~~nlti~N~~~~-----~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G 163 (181)
++|.+.+++|+++||||+|+++. .++||+||++.+|+..|++|+|+|+|||||.+.+||||++|+|||+||||||
T Consensus 147 aTv~v~a~~F~a~nitf~Nta~~~~~~~~g~QAVAl~v~gDka~f~~C~f~G~QDTL~~~~gr~yf~~CyIeG~VDFIFG 226 (366)
T PLN02665 147 ATLIVESDYFMAANIIIKNSAPRPDGKRKGAQAVAMRISGDKAAFYNCRFIGFQDTLCDDKGRHFFKDCYIEGTVDFIFG 226 (366)
T ss_pred EEEEEECCCeEEEeeEEEeCCCCcCCCCCCcceEEEEEcCCcEEEEcceeccccceeEeCCCCEEEEeeEEeeccceecc
Confidence 99999999999999999999852 2469999999999999999999999999999999999999999999999999
Q ss_pred cccEEEEeeEEEecCC
Q 035494 164 DAATIFQNCQIMVRKP 179 (181)
Q Consensus 164 ~~~~~f~~c~i~~~~~ 179 (181)
+|.++||+|+|+++.+
T Consensus 227 ~g~a~fe~C~i~s~~~ 242 (366)
T PLN02665 227 SGKSLYLNTELHVVGD 242 (366)
T ss_pred ccceeeEccEEEEecC
Confidence 9999999999999754
No 25
>PLN02432 putative pectinesterase
Probab=100.00 E-value=4.8e-54 Score=359.69 Aligned_cols=167 Identities=32% Similarity=0.624 Sum_probs=157.3
Q ss_pred cCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcccc
Q 035494 8 EPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIYD 87 (181)
Q Consensus 8 ~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~~~ 87 (181)
+..++|+++|+|+|+|||+||+++|..+.+|++|+|+||+|+|+|.|++.+++|||+|++.+.++|+++.. ..+..
T Consensus 10 ~~~~~Va~~Gsg~f~TIq~Aida~p~~~~~~~~I~I~~G~Y~E~V~ip~~k~~itl~G~~~~~TvI~~~~~----~~~~~ 85 (293)
T PLN02432 10 AILIRVDQSGKGDFRKIQDAIDAVPSNNSQLVFIWVKPGIYREKVVVPADKPFITLSGTQASNTIITWNDG----GDIFE 85 (293)
T ss_pred eEEEEECCCCCCCccCHHHHHhhccccCCceEEEEEeCceeEEEEEEeccCceEEEEEcCCCCeEEEecCC----ccccc
Confidence 46789999999999999999999999888899999999999999999999999999999999999998743 34678
Q ss_pred eeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEccccE
Q 035494 88 AATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDAAT 167 (181)
Q Consensus 88 ~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~~~~ 167 (181)
+++|.+.+++|+++||||+|++++ .+||+||++.+|+..|++|+|+|+|||||.+.+|+||++|+|+|+||||||+|++
T Consensus 86 saT~~v~a~~f~a~nlt~~Nt~g~-~~QAvAl~v~gDr~~f~~c~~~G~QDTLy~~~gr~yf~~c~I~G~VDFIFG~g~a 164 (293)
T PLN02432 86 SPTLSVLASDFVGRFLTIQNTFGS-SGKAVALRVAGDRAAFYGCRILSYQDTLLDDTGRHYYRNCYIEGATDFICGNAAS 164 (293)
T ss_pred ceEEEEECCCeEEEeeEEEeCCCC-CCceEEEEEcCCcEEEEcceEecccceeEECCCCEEEEeCEEEecccEEecCceE
Confidence 999999999999999999999986 4799999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeEEEecCC
Q 035494 168 IFQNCQIMVRKP 179 (181)
Q Consensus 168 ~f~~c~i~~~~~ 179 (181)
+||+|+|+++.+
T Consensus 165 ~Fe~c~i~s~~~ 176 (293)
T PLN02432 165 LFEKCHLHSLSP 176 (293)
T ss_pred EEEeeEEEEecC
Confidence 999999998754
No 26
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=2e-54 Score=390.68 Aligned_cols=175 Identities=44% Similarity=0.813 Sum_probs=169.1
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcc
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNI 85 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~ 85 (181)
.++++++|++||+|+|+|||+||+++|.++.+|++|+|+||+|+|+|.|++.+++|+|+|++.++|+|+++.+..+|.++
T Consensus 272 ~~~~~~vVa~dGsG~f~TI~~Av~a~p~~~~~r~vI~ik~GvY~E~V~i~~~k~ni~l~Gdg~~~TiIt~~~~~~~g~~t 351 (587)
T PLN02313 272 TIKADATVAADGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRENVEVTKKKKNIMFLGDGRGKTIITGSRNVVDGSTT 351 (587)
T ss_pred CCCCCEEECCCCCCCCccHHHHHHhccccCCceEEEEEeCceeEEEEEeCCCCCeEEEEecCCCccEEEeCCcccCCCCc
Confidence 46789999999999999999999999998889999999999999999999999999999999999999999888889899
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEccc
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDA 165 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~~ 165 (181)
+.++||.+.+++|.++||+|+|++++.++||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+||||||+|
T Consensus 352 ~~sat~~v~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~g~QDTLy~~~~rq~y~~c~I~GtvDFIFG~a 431 (587)
T PLN02313 352 FHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNA 431 (587)
T ss_pred eeeEEEEEECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeEecccchhccCCCcEEEEeeEEeeccceeccce
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeeEEEecCCC
Q 035494 166 ATIFQNCQIMVRKPL 180 (181)
Q Consensus 166 ~~~f~~c~i~~~~~~ 180 (181)
+++||+|+|++++|.
T Consensus 432 ~avfq~c~i~~r~~~ 446 (587)
T PLN02313 432 AAVLQDCDINARRPN 446 (587)
T ss_pred eEEEEccEEEEecCC
Confidence 999999999999764
No 27
>PF01095 Pectinesterase: Pectinesterase; InterPro: IPR000070 Pectinesterase 3.1.1.11 from EC (pectin methylesterase) catalyses the de-esterification of pectin into pectate and methanol. Pectin is one of the main components of the plant cell wall. In plants, pectinesterase plays an important role in cell wall metabolism during fruit ripening. In plant bacterial pathogens such as Erwinia carotovora and in fungal pathogens such as Aspergillus niger, pectinesterase is involved in maceration and soft-rotting of plant tissue. Plant pectinesterases are regulated by pectinesterase inhibitors, which are ineffective against microbial enzymes []. Prokaryotic and eukaryotic pectinesterases share a few regions of sequence similarity. The crystal structure of pectinesterase from Erwinia chrysanthemi revealed a beta-helix structure similar to that found in pectinolytic enzymes, though it is different from most structures of esterases []. The putative catalytic residues are in a similar location to those of the active site and substrate-binding cleft of pectate lyase.; GO: 0030599 pectinesterase activity, 0042545 cell wall modification, 0005618 cell wall; PDB: 1QJV_B 1XG2_A 1GQ8_A 2NTQ_A 2NTP_A 2NT9_A 2NT6_B 2NSP_B 2NTB_A 2NST_A ....
Probab=100.00 E-value=1.8e-54 Score=364.63 Aligned_cols=171 Identities=45% Similarity=0.863 Sum_probs=138.0
Q ss_pred eEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCccccee
Q 035494 10 HLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIYDAA 89 (181)
Q Consensus 10 ~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~~~~a 89 (181)
+|+|+++|+|+|+|||+||+++|..+..|++|+|+||+|+|+|.|++++++|+|+|++.++++|++.....++.++..++
T Consensus 1 ~i~Va~dG~gdf~TIq~Aida~p~~~~~~~~I~I~~G~Y~E~V~i~~~k~~v~l~G~~~~~tiI~~~~~~~~~~~t~~sa 80 (298)
T PF01095_consen 1 DIVVAQDGSGDFTTIQAAIDAAPDNNTSRYTIFIKPGTYREKVTIPRSKPNVTLIGEGRDKTIITGNDNAADGGGTFRSA 80 (298)
T ss_dssp SEEE-TTSTSSBSSHHHHHHHS-SSSSS-EEEEE-SEEEE--EEE-STSTTEEEEES-TTTEEEEE---TTTB-HCGGC-
T ss_pred CeEECCCCCCCccCHHHHHHhchhcCCceEEEEEeCeeEccccEeccccceEEEEecCCCceEEEEeccccccccccccc
Confidence 58999999999999999999999988889999999999999999999899999999999999999976666777889999
Q ss_pred EEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEccccEEE
Q 035494 90 TFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDAATIF 169 (181)
Q Consensus 90 ~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~~~~~f 169 (181)
+|.+.+++|+++||||+|+++...+||+||++.+|+..|++|+|.|+|||||++++|+||++|+|+|+||||||.++++|
T Consensus 81 T~~v~a~~f~~~nit~~Nt~g~~~~qAvAl~~~~d~~~f~~c~~~g~QDTL~~~~~r~y~~~c~IeG~vDFIfG~~~a~f 160 (298)
T PF01095_consen 81 TFSVNADDFTAENITFENTAGPSGGQAVALRVSGDRAAFYNCRFLGYQDTLYANGGRQYFKNCYIEGNVDFIFGNGTAVF 160 (298)
T ss_dssp SEEE-STT-EEEEEEEEEHCSGSG----SEEET-TSEEEEEEEEE-STT-EEE-SSEEEEES-EEEESEEEEEESSEEEE
T ss_pred cccccccceeeeeeEEecCCCCcccceeeeeecCCcEEEEEeEEccccceeeeccceeEEEeeEEEecCcEEECCeeEEe
Confidence 99999999999999999999887899999999999999999999999999999999999999999999999999999999
Q ss_pred EeeEEEecCCC
Q 035494 170 QNCQIMVRKPL 180 (181)
Q Consensus 170 ~~c~i~~~~~~ 180 (181)
++|+|++++|.
T Consensus 161 ~~c~i~~~~~~ 171 (298)
T PF01095_consen 161 ENCTIHSRRPG 171 (298)
T ss_dssp ES-EEEE--SS
T ss_pred eeeEEEEeccc
Confidence 99999998753
No 28
>PLN02634 probable pectinesterase
Probab=100.00 E-value=8.3e-54 Score=365.41 Aligned_cols=171 Identities=26% Similarity=0.561 Sum_probs=158.8
Q ss_pred cCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecC----CC-
Q 035494 8 EPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVA----DG- 82 (181)
Q Consensus 8 ~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~----~g- 82 (181)
+.+++|+++|+|+|+|||+||+++|+++.+|++|+|+||+|+|+|+|++.+++|||+|++.+.|+|+++.... +|
T Consensus 55 ~~~i~Va~dGsGdf~TIQaAIda~P~~~~~r~vI~Ik~GvY~EkV~Ip~~k~~ItL~G~g~~~TiIt~~~~a~~~~~~g~ 134 (359)
T PLN02634 55 HKVITVDANGHGDFRSVQDAVDSVPKNNTMSVTIKINAGFYREKVVVPATKPYITFQGAGRDVTAIEWHDRASDRGANGQ 134 (359)
T ss_pred CccEEECCCCCCCccCHHHHHhhCcccCCccEEEEEeCceEEEEEEEcCCCCeEEEEecCCCceEEEecccccccCCCCc
Confidence 3579999999999999999999999988899999999999999999999999999999999999999875432 22
Q ss_pred -CcccceeEEEEecCCEEEEEeEEEeCCCC-----CCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEec
Q 035494 83 -VNIYDAATFVAIGEGLFAKSMGFRNIAGP-----ENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITG 156 (181)
Q Consensus 83 -~~~~~~a~~~v~~~~~~~~nlti~N~~~~-----~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G 156 (181)
.+++.+++|.+.+++|+++||||+|+++. ..+||+||++.+||..|++|+|+|+|||||.+.+||||++|+|||
T Consensus 135 ~~~T~~SaTv~V~a~~F~a~niTf~Nta~~~~~g~~~~QAVAl~v~gDra~f~~C~f~G~QDTL~~~~gR~yf~~CyIeG 214 (359)
T PLN02634 135 QLRTYQTASVTVYANYFTARNISFKNTAPAPMPGMQGWQAVAFRISGDKAFFFGCGFYGAQDTLCDDAGRHYFKECYIEG 214 (359)
T ss_pred ccccccceEEEEECCCeEEEeCeEEeCCccCCCCCCCCceEEEEecCCcEEEEEeEEecccceeeeCCCCEEEEeeEEcc
Confidence 57889999999999999999999999852 368999999999999999999999999999999999999999999
Q ss_pred ceeeEEccccEEEEeeEEEecC
Q 035494 157 TVDFIFGDAATIFQNCQIMVRK 178 (181)
Q Consensus 157 ~vDfi~G~~~~~f~~c~i~~~~ 178 (181)
+||||||+|.++||+|+|+++.
T Consensus 215 ~VDFIFG~g~a~Fe~C~I~s~~ 236 (359)
T PLN02634 215 SIDFIFGNGRSMYKDCELHSIA 236 (359)
T ss_pred cccEEcCCceEEEeccEEEEec
Confidence 9999999999999999999874
No 29
>PLN02671 pectinesterase
Probab=100.00 E-value=1e-53 Score=365.13 Aligned_cols=174 Identities=29% Similarity=0.530 Sum_probs=159.8
Q ss_pred CcccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCC--CceEEEeeeecC--
Q 035494 5 NKIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGS--QKSIIVGRKSVA-- 80 (181)
Q Consensus 5 ~~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~--~~~~I~~~~~~~-- 80 (181)
.+.+..++|+++|+|+|+|||+||+++|+++..|++|+|+||+|+|+|+|++++++|||+|++. ++|+|+++....
T Consensus 55 ~~~~~~i~Va~dGsGdf~TIQ~AIdavP~~~~~~~~I~Ik~GvY~EkV~I~~~k~~Itl~G~g~~~~~TvIt~~~~a~~~ 134 (359)
T PLN02671 55 TNVSRVIVVDKNGGGDSLTVQGAVDMVPDYNSQRVKIYILPGIYREKVLVPKSKPYISFIGNESRAGDTVISWNDKASDL 134 (359)
T ss_pred cCCceeEEECCCCCCCccCHHHHHHhchhcCCccEEEEEeCceEEEEEEECCCCCeEEEEecCCCCCCEEEEcCCccccc
Confidence 4556789999999999999999999999988889999999999999999999999999999974 689999876542
Q ss_pred --CC--CcccceeEEEEecCCEEEEEeEEEeCCC----CCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeecc
Q 035494 81 --DG--VNIYDAATFVAIGEGLFAKSMGFRNIAG----PENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSC 152 (181)
Q Consensus 81 --~g--~~~~~~a~~~v~~~~~~~~nlti~N~~~----~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c 152 (181)
+| +++..+++|.+.+++|+++||||+|++. ...+||+||++.+||..|++|+|+|+|||||.+.+||||++|
T Consensus 135 ~~~g~~~gT~~SaTv~v~a~~F~a~nitfeNt~~~~~g~~~~QAVALrv~gDra~f~~c~f~G~QDTLy~~~gR~yf~~C 214 (359)
T PLN02671 135 DSNGFELGTYRTASVTIESDYFCATGITFENTVVAEPGGQGMQAVALRISGDKAFFYKVRVLGAQDTLLDETGSHYFYQC 214 (359)
T ss_pred ccCCccccceeeEEEEEECCceEEEeeEEEcCCCCCCCCCCccEEEEEEcCccEEEEcceEeccccccEeCCCcEEEEec
Confidence 22 5788999999999999999999999953 336899999999999999999999999999999999999999
Q ss_pred EEecceeeEEccccEEEEeeEEEecC
Q 035494 153 LITGTVDFIFGDAATIFQNCQIMVRK 178 (181)
Q Consensus 153 ~I~G~vDfi~G~~~~~f~~c~i~~~~ 178 (181)
+|+|+||||||+|+++||+|+|+++.
T Consensus 215 yIeG~VDFIFG~g~A~Fe~C~I~s~~ 240 (359)
T PLN02671 215 YIQGSVDFIFGNAKSLYQDCVIQSTA 240 (359)
T ss_pred EEEEeccEEecceeEEEeccEEEEec
Confidence 99999999999999999999999874
No 30
>PLN02497 probable pectinesterase
Probab=100.00 E-value=1.7e-53 Score=361.04 Aligned_cols=166 Identities=31% Similarity=0.596 Sum_probs=155.2
Q ss_pred CeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcccce
Q 035494 9 PHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIYDA 88 (181)
Q Consensus 9 ~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~~~~ 88 (181)
.+++|+++|+|+|+|||+||+++|.++.+|++|+|+||+|+|+|.|++.|++|||+|++.+.++|+++.. .++..+
T Consensus 32 ~~i~Va~dGsGdf~TIq~AIdavP~~~~~~~~I~Ik~G~Y~EkV~Ip~~k~~itl~G~g~~~tiIt~~~~----~~t~~S 107 (331)
T PLN02497 32 QQVFVDQSGHGNFTTIQSAIDSVPSNNKHWFCINVKAGLYREKVKIPYDKPFIVLVGAGKRRTRIEWDDH----DSTAQS 107 (331)
T ss_pred eEEEECCCCCCCccCHHHHHhhccccCCceEEEEEeCcEEEEEEEecCCCCcEEEEecCCCCceEEEecc----ccccCc
Confidence 4789999999999999999999999888999999999999999999999999999999999999998753 245678
Q ss_pred eEEEEecCCEEEEEeEEEeCCCC-------CCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeE
Q 035494 89 ATFVAIGEGLFAKSMGFRNIAGP-------ENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFI 161 (181)
Q Consensus 89 a~~~v~~~~~~~~nlti~N~~~~-------~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi 161 (181)
++|.+.+++|+++||||+|+++. ..+||+||++.+|+..|++|+|+|+|||||.+.+||||++|+|||+||||
T Consensus 108 aT~~v~a~~f~a~nlT~~Nt~~~~~~~~~~~~~QAVAl~v~gDr~~fy~C~f~G~QDTLy~~~gRqyf~~C~IeG~VDFI 187 (331)
T PLN02497 108 PTFSTLADNTVVKSITFANSYNFPSKGNKNPRVPAVAAMIGGDKSAFYSCGFAGVQDTLWDSDGRHYFKRCTIQGAVDFI 187 (331)
T ss_pred eEEEEecCCeEEEccEEEeCCCCccccCCCCCcceEEEEecCCcEEEEeeEEeccccceeeCCCcEEEEeCEEEecccEE
Confidence 99999999999999999999862 14699999999999999999999999999999999999999999999999
Q ss_pred EccccEEEEeeEEEecC
Q 035494 162 FGDAATIFQNCQIMVRK 178 (181)
Q Consensus 162 ~G~~~~~f~~c~i~~~~ 178 (181)
||+|+++||+|+|+++.
T Consensus 188 FG~g~a~Fe~C~I~s~~ 204 (331)
T PLN02497 188 FGSGQSIYESCVIQVLG 204 (331)
T ss_pred ccCceEEEEccEEEEec
Confidence 99999999999999874
No 31
>PLN02480 Probable pectinesterase
Probab=100.00 E-value=6.6e-53 Score=359.47 Aligned_cols=171 Identities=31% Similarity=0.558 Sum_probs=157.1
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcc
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNI 85 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~ 85 (181)
..+.+++|+++|+|+|+|||+||+++|+++++|++|+|+||+|+|+|+|++.||+|||+|++.+.++|+++.+... +
T Consensus 45 ~~~~~~~Va~~G~g~f~TIQ~AIdaap~~~~~~~~I~Ik~GvY~E~V~I~~~kp~ItL~G~g~~~TvI~~~~~~~~---~ 121 (343)
T PLN02480 45 GTNRTIIVDINGKGDFTSVQSAIDAVPVGNSEWIIVHLRKGVYREKVHIPENKPFIFMRGNGKGRTSIVWSQSSSD---N 121 (343)
T ss_pred CcccEEEECCCCCCCcccHHHHHhhCccCCCceEEEEEcCcEEEEEEEECCCCceEEEEecCCCCeEEEccccccC---C
Confidence 3446899999999999999999999999988899999999999999999988889999999999999998764322 2
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCC-----CCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGP-----ENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDF 160 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~-----~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDf 160 (181)
..+++|.|.+++|+++||||+|+++. ..+||+||++.+|+..|++|+|.|+|||||.+.+||||++|+|||+|||
T Consensus 122 ~~saTvtV~a~~f~a~nLTf~Nta~~g~~~~~~~QAVAl~v~gDra~f~~c~f~G~QDTLy~~~gR~yf~~C~IeG~VDF 201 (343)
T PLN02480 122 AASATFTVEAPHFVAFGISIRNDAPTGMAFTSENQSVAAFVGADKVAFYHCAFYSTHNTLFDYKGRHYYHSCYIQGSIDF 201 (343)
T ss_pred CCceEEEEECCCEEEEeeEEEecCCCCCCCCCCCceEEEEecCCcEEEEeeEEecccceeEeCCCCEEEEeCEEEeeeeE
Confidence 46899999999999999999999753 2479999999999999999999999999999999999999999999999
Q ss_pred EEccccEEEEeeEEEecCC
Q 035494 161 IFGDAATIFQNCQIMVRKP 179 (181)
Q Consensus 161 i~G~~~~~f~~c~i~~~~~ 179 (181)
|||+|+++||+|+|+++.+
T Consensus 202 IFG~g~a~fe~C~i~s~~~ 220 (343)
T PLN02480 202 IFGRGRSIFHNCEIFVIAD 220 (343)
T ss_pred EccceeEEEEccEEEEecC
Confidence 9999999999999999854
No 32
>PRK10531 acyl-CoA thioesterase; Provisional
Probab=100.00 E-value=1.8e-51 Score=356.58 Aligned_cols=171 Identities=27% Similarity=0.405 Sum_probs=151.7
Q ss_pred CeEEE--eCCCCCCcccHHHHHHhCC-CCCCceEEEEEcCcEEEeeEEEeccccCEEEEecC--CCceEEEeee------
Q 035494 9 PHLIV--AKDGSGNFTTISEALAAVP-QKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEG--SQKSIIVGRK------ 77 (181)
Q Consensus 9 ~~i~V--~~~g~g~f~TIq~Ai~aa~-~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~--~~~~~I~~~~------ 77 (181)
++++| +++|+|+|+|||+||++++ .++.+|++|+|+||+|+|+|+|++.|++|||+|++ +++|+|+++.
T Consensus 80 ~~~vV~~a~dGsGdf~TIQaAIdAa~~~~~~~r~~I~Ik~GvY~EkV~Ip~~kp~ItL~G~G~~~~~TvIt~~~~~~~~~ 159 (422)
T PRK10531 80 PDFVVGPAGTQGVTHTTVQAAVDAAIAKRTNKRQYIAVMPGTYQGTVYVPAAAPPITLYGTGEKPIDVKIGLALDGEMSP 159 (422)
T ss_pred CcEEEecCCCCCCCccCHHHHHhhccccCCCceEEEEEeCceeEEEEEeCCCCceEEEEecCCCCCceEEEecCcccccc
Confidence 78999 7788899999999999875 45677999999999999999999999999999976 4679999861
Q ss_pred -----ec-----------------------CCCCcccceeEEEEecCCEEEEEeEEEeCCCC----CCCceEEEEEcCCc
Q 035494 78 -----SV-----------------------ADGVNIYDAATFVAIGEGLFAKSMGFRNIAGP----ENGEAVAARVQSDR 125 (181)
Q Consensus 78 -----~~-----------------------~~g~~~~~~a~~~v~~~~~~~~nlti~N~~~~----~~~qa~al~~~~~~ 125 (181)
.. ..+.+++++++|.+.+++|+++||||+|+++. ..+||+||++.+||
T Consensus 160 ~~~~~~~~~~g~~~~~~p~~y~~d~~~~~~~~~~gT~~SATv~v~ad~F~a~NLTf~Ntag~~~~~~~~QAVALrv~GDr 239 (422)
T PRK10531 160 ADWRANVNPRGKYMPGKPAWYMYDSCQSKRAATIGTLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDK 239 (422)
T ss_pred ccccccccccccccccccccccccccccccCCCcCceeeEEEEEECCCEEEEeeEEEeCCCCCCCCCcceeEEEEEcCCc
Confidence 01 12357889999999999999999999999973 35899999999999
Q ss_pred eEEEeeEEeeeeeeEEec------------ccceeeeccEEecceeeEEccccEEEEeeEEEecCC
Q 035494 126 ATFHNCRFEGYKNAVWAQ------------THRQFYRSCLITGTVDFIFGDAATIFQNCQIMVRKP 179 (181)
Q Consensus 126 ~~~~~c~~~g~qdTl~~~------------~~~~~~~~c~I~G~vDfi~G~~~~~f~~c~i~~~~~ 179 (181)
..|++|+|+|+|||||++ .+|+||++|+|||+||||||+|+++||+|+|+++.+
T Consensus 240 a~fy~C~flG~QDTLy~~~~~~~~~~~~~~~gRqYf~~CyIeG~VDFIFG~g~AvFenC~I~s~~~ 305 (422)
T PRK10531 240 VQIENVNILGRQDTFFVTNSGVQNRLETDRQPRTYVKNSYIEGDVDFVFGRGAVVFDNTEFRVVNS 305 (422)
T ss_pred EEEEeeEEecccceeeeccccccccccccccccEEEEeCEEeecccEEccCceEEEEcCEEEEecC
Confidence 999999999999999983 459999999999999999999999999999999754
No 33
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=4.4e-43 Score=311.85 Aligned_cols=143 Identities=44% Similarity=0.863 Sum_probs=135.0
Q ss_pred cccCeEEEeCCCCCCcccHHHHHHhCCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcc
Q 035494 6 KIEPHLIVAKDGSGNFTTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNI 85 (181)
Q Consensus 6 ~~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~ 85 (181)
.++++++|++||+|+|+|||+||+++|.++ +.++|+|+++.+..+|.++
T Consensus 211 ~~~~~~~Va~dGsG~f~tiq~Ai~a~p~~~-------------------------------g~~~TiIt~~~~~~~g~~t 259 (497)
T PLN02698 211 TIKANAVVAKDGTGNYETVSEAITAAHGNH-------------------------------GKYSTVIVGDDSVTGGTSV 259 (497)
T ss_pred CCCceEEEcCCCCCCcccHHHHHHhhhhcC-------------------------------CCCceEEEeCCcccCCCcc
Confidence 367899999999999999999999999873 3458999999887788889
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEccc
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDA 165 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~~ 165 (181)
++++||.|.+++|.++||+|+|++++.++||+||++.+|+..|++|+|.|||||||++.+||||++|+|+|+||||||++
T Consensus 260 ~~SaT~~v~~~~F~a~nitf~Ntag~~~~QAvAl~v~~D~~~fy~c~~~G~QDTLy~~~~rqyy~~C~I~G~vDFIFG~a 339 (497)
T PLN02698 260 PDTATFTITGDGFIARDIGFKNAAGPKGEQAIALSITSDHSVLYRCSIAGYQDTLYAAALRQFYRECDIYGTIDFIFGNA 339 (497)
T ss_pred ccceeEEEECCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeecccchheeCCCcEEEEeeEEEeccceEeccc
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeeEEEecCC
Q 035494 166 ATIFQNCQIMVRKP 179 (181)
Q Consensus 166 ~~~f~~c~i~~~~~ 179 (181)
+++||+|+|++++|
T Consensus 340 ~avf~~C~i~~~~~ 353 (497)
T PLN02698 340 AAVFQNCYLFLRRP 353 (497)
T ss_pred ceeecccEEEEecC
Confidence 99999999999876
No 34
>COG4677 PemB Pectin methylesterase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.3e-42 Score=285.23 Aligned_cols=170 Identities=29% Similarity=0.469 Sum_probs=147.4
Q ss_pred EEEeCCCCC-CcccHHHHHHhCCCC-CCceEEEEEcCcEEEeeEEEeccccCEEEEecCCC--ceEEEeeeecC------
Q 035494 11 LIVAKDGSG-NFTTISEALAAVPQK-YEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQ--KSIIVGRKSVA------ 80 (181)
Q Consensus 11 i~V~~~g~g-~f~TIq~Ai~aa~~~-~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~--~~~I~~~~~~~------ 80 (181)
.+|++...| +|+|||+||++++.. ..+|+.|.|++|+|.|.|.|++..++|||+|++.+ .++|..+....
T Consensus 83 avvsa~a~G~~f~TIQaAvdaA~~~~~~kr~yI~vk~GvY~e~v~Vp~~~~~ITLyGed~~~~~tvIg~n~aagp~np~~ 162 (405)
T COG4677 83 AVVSAGAQGVTFTTIQAAVDAAIIKRTNKRQYIAVKAGVYQETVYVPAAPGGITLYGEDEKPIDTVIGLNLAAGPGNPAG 162 (405)
T ss_pred eEEecCCCccchHHHHHHHhhhcccCCCceEEEEEccceeceeEEecCCCCceeEEecCCCCcceEEEEecCCCCCCccc
Confidence 344443345 899999999998765 34899999999999999999998778999999887 78887553220
Q ss_pred -----------CCCcccceeEEEEecCCEEEEEeEEEeCCCCC----CCceEEEEEcCCceEEEeeEEeeeeeeEEeccc
Q 035494 81 -----------DGVNIYDAATFVAIGEGLFAKSMGFRNIAGPE----NGEAVAARVQSDRATFHNCRFEGYKNAVWAQTH 145 (181)
Q Consensus 81 -----------~g~~~~~~a~~~v~~~~~~~~nlti~N~~~~~----~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~ 145 (181)
.-.++.+++++++.+++|.++||||+|++++. .++|+||+.+||++.|++|+++|+|||||++.+
T Consensus 163 ~m~n~c~ss~~~tigt~~Sat~~v~~ndf~~~nlT~en~~gd~~lagn~~AVaL~~dgDka~frnv~llg~QdTlFv~~~ 242 (405)
T COG4677 163 YMYNSCQSSRSATIGTLCSATFWVQNNDFQLQNLTIENTLGDGVLAGNHPAVALATDGDKAIFRNVNLLGNQDTLFVGNS 242 (405)
T ss_pred eeecccccchhhhhhhhhhhhheeecCCcccccceeecccCCccccCCceeEEEEecCCceeeeeeeEeeccceEEecCC
Confidence 11567889999999999999999999999864 578999999999999999999999999999876
Q ss_pred ------------ceeeeccEEecceeeEEccccEEEEeeEEEecCCC
Q 035494 146 ------------RQFYRSCLITGTVDFIFGDAATIFQNCQIMVRKPL 180 (181)
Q Consensus 146 ------------~~~~~~c~I~G~vDfi~G~~~~~f~~c~i~~~~~~ 180 (181)
|+||.||+|+|+||||||.|+++|++|+|+++.++
T Consensus 243 ~~~~~~~tn~~~R~yftNsyI~GdvDfIfGsgtaVFd~c~i~~~d~r 289 (405)
T COG4677 243 GVQNRLETNRQPRTYFTNSYIEGDVDFIFGSGTAVFDNCEIQVVDSR 289 (405)
T ss_pred CCccccccCcchhhheecceecccceEEeccceEEeccceEEEeccC
Confidence 88999999999999999999999999999988665
No 35
>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein. Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.
Probab=99.69 E-value=1.4e-15 Score=129.51 Aligned_cols=135 Identities=18% Similarity=0.289 Sum_probs=109.0
Q ss_pred HHHHHHhCCCCCCceEEEEEcCcEEE--eeEEEeccccCEEEEecCCCceEEEeeeecCCCCcccceeEEEEecCCEEEE
Q 035494 24 ISEALAAVPQKYEGRFVIFVATGIYE--ESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIYDAATFVAIGEGLFAK 101 (181)
Q Consensus 24 Iq~Ai~aa~~~~~~~~tI~I~~G~Y~--E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~~~~a~~~v~~~~~~~~ 101 (181)
||+||++|++++ ||.|+||+|+ |.|.|++ ++|||.|++++.++|++.... .....+.+.+++++++
T Consensus 1 iQ~Ai~~A~~GD----tI~l~~G~Y~~~~~l~I~~--~~Iti~G~g~~~tvid~~~~~------~~~~~i~v~a~~VtI~ 68 (314)
T TIGR03805 1 LQEALIAAQPGD----TIVLPEGVFQFDRTLSLDA--DGVTIRGAGMDETILDFSGQV------GGAEGLLVTSDDVTLS 68 (314)
T ss_pred CHhHHhhCCCCC----EEEECCCEEEcceeEEEeC--CCeEEEecCCCccEEecccCC------CCCceEEEEeCCeEEE
Confidence 799999999997 9999999999 8999985 489999999888999976421 1246788899999999
Q ss_pred EeEEEeCCCCCCCceEEEEE-cCCceEEEeeEEe--------eeeeeEEecccc-eeeeccEEeccee--eEEcc-ccEE
Q 035494 102 SMGFRNIAGPENGEAVAARV-QSDRATFHNCRFE--------GYKNAVWAQTHR-QFYRSCLITGTVD--FIFGD-AATI 168 (181)
Q Consensus 102 nlti~N~~~~~~~qa~al~~-~~~~~~~~~c~~~--------g~qdTl~~~~~~-~~~~~c~I~G~vD--fi~G~-~~~~ 168 (181)
+|+++|+.+. +|++ .++++.+++|++. ...+++|+..++ ..+++|+|.|.-| +.++. -...
T Consensus 69 ~ltI~~~~~~------GI~v~~s~~i~I~n~~i~~~~~~~~~~~~~GI~~~~s~~v~I~~n~i~g~~d~GIyv~~s~~~~ 142 (314)
T TIGR03805 69 DLAVENTKGD------GVKVKGSDGIIIRRLRVEWTGGPKSSNGAYGIYPVESTNVLVEDSYVRGASDAGIYVGQSQNIV 142 (314)
T ss_pred eeEEEcCCCC------eEEEeCCCCEEEEeeEEEeccCccccCCcceEEEeccCCEEEECCEEECCCcccEEECCCCCeE
Confidence 9999998642 5665 6789999999997 335788887665 4899999999877 33344 4688
Q ss_pred EEeeEEEe
Q 035494 169 FQNCQIMV 176 (181)
Q Consensus 169 f~~c~i~~ 176 (181)
|++|+++.
T Consensus 143 v~nN~~~~ 150 (314)
T TIGR03805 143 VRNNVAEE 150 (314)
T ss_pred EECCEEcc
Confidence 89988763
No 36
>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein. Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.
Probab=99.32 E-value=5.7e-11 Score=104.35 Aligned_cols=121 Identities=12% Similarity=0.202 Sum_probs=95.6
Q ss_pred ccHHHHHHhCCCCCCceEEEEEcCcEEE-eeEEEeccccCEEEEecCCCce--EEEeeeecCCCCcccceeEEEEecCCE
Q 035494 22 TTISEALAAVPQKYEGRFVIFVATGIYE-ESVTVSKRMVNLTIIGEGSQKS--IIVGRKSVADGVNIYDAATFVAIGEGL 98 (181)
Q Consensus 22 ~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~-E~v~I~~~~~~vtl~G~~~~~~--~I~~~~~~~~g~~~~~~a~~~v~~~~~ 98 (181)
.-||+||+++.++. .+|.|.||+|+ +.+.|++ +++|.|+.. .+ +|++. .+..+.+.++++
T Consensus 55 ~ALQaAIdaAa~gG---~tV~Lp~G~Y~~G~L~L~s---pltL~G~~g-At~~vIdG~----------~~lIiai~A~nV 117 (455)
T TIGR03808 55 RALQRAIDEAARAQ---TPLALPPGVYRTGPLRLPS---GAQLIGVRG-ATRLVFTGG----------PSLLSSEGADGI 117 (455)
T ss_pred HHHHHHHHHhhcCC---CEEEECCCceecccEEECC---CcEEEecCC-cEEEEEcCC----------ceEEEEecCCCe
Confidence 56999999877432 38999999997 8999997 899999963 23 35443 245568899999
Q ss_pred EEEEeEEEeCCCCCCCceEEEEE-cCCceEEEeeEEeee-eeeEEecccceeeeccEEeccee
Q 035494 99 FAKSMGFRNIAGPENGEAVAARV-QSDRATFHNCRFEGY-KNAVWAQTHRQFYRSCLITGTVD 159 (181)
Q Consensus 99 ~~~nlti~N~~~~~~~qa~al~~-~~~~~~~~~c~~~g~-qdTl~~~~~~~~~~~c~I~G~vD 159 (181)
++++|+|.++..+...+..+|++ +++++.+++|+|.+. .+++|++.......++.|.|+.|
T Consensus 118 TIsGLtIdGsG~dl~~rdAgI~v~~a~~v~Iedn~L~gsg~FGI~L~~~~~~I~~N~I~g~~~ 180 (455)
T TIGR03808 118 GLSGLTLDGGGIPLPQRRGLIHCQGGRDVRITDCEITGSGGNGIWLETVSGDISGNTITQIAV 180 (455)
T ss_pred EEEeeEEEeCCCcccCCCCEEEEccCCceEEEeeEEEcCCcceEEEEcCcceEecceEecccc
Confidence 99999999998776667778777 689999999999999 59999998765555566665544
No 37
>PF07602 DUF1565: Protein of unknown function (DUF1565); InterPro: IPR011459 These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterised domains such as IPR001119 from INTERPRO (e.g. Q8YWJ6 from SWISSPROT) and IPR005084 from INTERPRO (e.g. Q9FBS2 from SWISSPROT).
Probab=99.19 E-value=8.1e-10 Score=90.97 Aligned_cols=129 Identities=21% Similarity=0.308 Sum_probs=90.3
Q ss_pred CCcccHHHHHHhCCCCCCceEEEEEcCcEEEee------EEEeccccCEEEEecCCCc----eEEEeeee--cCCCCccc
Q 035494 19 GNFTTISEALAAVPQKYEGRFVIFVATGIYEES------VTVSKRMVNLTIIGEGSQK----SIIVGRKS--VADGVNIY 86 (181)
Q Consensus 19 g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E~------v~I~~~~~~vtl~G~~~~~----~~I~~~~~--~~~g~~~~ 86 (181)
.+|+||+.||++|++++ +|+|+||+|+|. +.|++ .|+|+|+...+ +++.+... ..++.+..
T Consensus 13 ~P~~Ti~~A~~~a~~g~----~i~l~~GtY~~~~ge~fPi~i~~---gVtl~G~~~~kG~~~il~~g~~~~~~I~g~~~~ 85 (246)
T PF07602_consen 13 APFKTITKALQAAQPGD----TIQLAPGTYSEATGETFPIIIKP---GVTLIGNESNKGQIDILITGGGTGPTISGGGPD 85 (246)
T ss_pred cCHHHHHHHHHhCCCCC----EEEECCceeccccCCcccEEecC---CeEEeecccCCCcceEEecCCceEEeEeccCcc
Confidence 57999999999999996 999999999986 55654 89999975422 23333211 11221111
Q ss_pred ---ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeee-eeeEEeccc--ceeeeccEEecce
Q 035494 87 ---DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGY-KNAVWAQTH--RQFYRSCLITGTV 158 (181)
Q Consensus 87 ---~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~-qdTl~~~~~--~~~~~~c~I~G~v 158 (181)
...++ +.+++.++++++|+|... .+..++++++....+.||.|.+. ++.+++... ..-+.+..|+|+.
T Consensus 86 ~~~qn~tI-~~~~~~~i~GvtItN~n~---~~g~Gi~Iess~~tI~Nntf~~~~~~GI~v~g~~~~~~i~~~vI~GN~ 159 (246)
T PF07602_consen 86 LSGQNVTI-ILANNATISGVTITNPNI---ARGTGIWIESSSPTIANNTFTNNGREGIFVTGTSANPGINGNVISGNS 159 (246)
T ss_pred ccceeEEE-EecCCCEEEEEEEEcCCC---CcceEEEEecCCcEEEeeEEECCccccEEEEeeecCCcccceEeecce
Confidence 11222 346789999999999831 45679999888999999999985 888888543 2345566666664
No 38
>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A.
Probab=99.05 E-value=2.8e-09 Score=93.50 Aligned_cols=121 Identities=17% Similarity=0.353 Sum_probs=74.2
Q ss_pred ccHHHHHHhCCCCCCceEEEEEcCcEEEe-eEEEecc---ccCEEEEecCCCceEEEeeeecCCCCcccceeEEEEecCC
Q 035494 22 TTISEALAAVPQKYEGRFVIFVATGIYEE-SVTVSKR---MVNLTIIGEGSQKSIIVGRKSVADGVNIYDAATFVAIGEG 97 (181)
Q Consensus 22 ~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~E-~v~I~~~---~~~vtl~G~~~~~~~I~~~~~~~~g~~~~~~a~~~v~~~~ 97 (181)
+.||+||++|.+|+ +|.|++|+|.. .+.+.+. ..||||..+.+.+++|+|. +.|.+.+++
T Consensus 5 ~~lq~Ai~~a~pGD----~I~L~~Gty~~~~i~~~~~GT~~~PItl~Ae~~G~vvi~G~------------s~l~i~G~y 68 (425)
T PF14592_consen 5 AELQSAIDNAKPGD----TIVLADGTYKDVEIVFKGSGTAAKPITLRAENPGKVVITGE------------SNLRISGSY 68 (425)
T ss_dssp HHHHHHHHH--TT-----EEEE-SEEEET-EEEE-S--BTTB-EEEEESSTTSEEEEES-------------EEEE-SSS
T ss_pred HHHHHHHHhCCCCC----EEEECCceeecceEEEEecccCCCCEEEEecCCCeEEEecc------------eeEEEEeee
Confidence 57999999999996 99999999997 5666532 2699999999999999986 478888999
Q ss_pred EEEEEeEEEeCCCCCCCceEE-----EEEcCCceEEEeeEEeee------eeeEEe-----cccceeeeccEEeccee
Q 035494 98 LFAKSMGFRNIAGPENGEAVA-----ARVQSDRATFHNCRFEGY------KNAVWA-----QTHRQFYRSCLITGTVD 159 (181)
Q Consensus 98 ~~~~nlti~N~~~~~~~qa~a-----l~~~~~~~~~~~c~~~g~------qdTl~~-----~~~~~~~~~c~I~G~vD 159 (181)
+++++|.|+|.+.+. ..... -.+.+++..+.+|.|..+ .+..|+ .+...-+.+|+++|...
T Consensus 69 l~v~GL~F~ng~~~~-~~vi~fr~~~~~~~a~~~RlT~~vi~~fn~~~~~~~~~wv~~~~l~G~~NrvDhn~F~gK~~ 145 (425)
T PF14592_consen 69 LVVSGLKFKNGYTPT-GAVISFRNGGDASYANHCRLTNCVIDDFNNPDREESDNWVTIYSLYGKHNRVDHNYFQGKTN 145 (425)
T ss_dssp EEEES-EEEEE---T-TT--TTS--SEEE-SSS-EEES-EEES--SS-S-SEEE---TT-----S-EEES-EEE---S
T ss_pred EEEeCeEEecCCCCC-CceEEeecCCCcceecceEEEeEEeeccCCcccccCceEEEEEEeeccCceEEccEeecccc
Confidence 999999999976542 11111 113688999999999965 234555 23334689999997543
No 39
>COG3420 NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism]
Probab=98.81 E-value=5.3e-08 Score=82.81 Aligned_cols=110 Identities=13% Similarity=0.172 Sum_probs=92.2
Q ss_pred CCCCCCceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEeeeecCCCCcccceeEEEEecCCEEEEEeEEEeCCC
Q 035494 31 VPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIYDAATFVAIGEGLFAKSMGFRNIAG 110 (181)
Q Consensus 31 a~~~~~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~~~~a~~~v~~~~~~~~nlti~N~~~ 110 (181)
|.+++ .+-|. |+|.|.++|++ +|||.|+. ..++++.. ++.++++.+.++++++|+++++..
T Consensus 31 a~pgd----~~~i~-g~~~g~~vInr---~l~l~ge~--ga~l~g~g---------~G~~vtv~aP~~~v~Gl~vr~sg~ 91 (408)
T COG3420 31 AKPGD----YYGIS-GRYAGNFVINR---ALTLRGEN--GAVLDGGG---------KGSYVTVAAPDVIVEGLTVRGSGR 91 (408)
T ss_pred cCCCc----EEEEe-eeecccEEEcc---ceeecccc--ccEEecCC---------cccEEEEeCCCceeeeEEEecCCC
Confidence 45553 77777 99999999998 89999997 56776653 367999999999999999999988
Q ss_pred CCCCceEEEEE--cCCceEEEeeEEeeeeeeEEeccc-ceeeeccEEeccee
Q 035494 111 PENGEAVAARV--QSDRATFHNCRFEGYKNAVWAQTH-RQFYRSCLITGTVD 159 (181)
Q Consensus 111 ~~~~qa~al~~--~~~~~~~~~c~~~g~qdTl~~~~~-~~~~~~c~I~G~vD 159 (181)
....+..+|.+ .+.+..+++|.+.+.-.++|+++. +...+..+|+|.-|
T Consensus 92 ~lp~m~agI~v~~~at~A~Vr~N~l~~n~~Gi~l~~s~d~~i~~n~i~G~~~ 143 (408)
T COG3420 92 SLPAMDAGIFVGRTATGAVVRHNDLIGNSFGIYLHGSADVRIEGNTIQGLAD 143 (408)
T ss_pred CcccccceEEeccCcccceEEcccccccceEEEEeccCceEEEeeEEeeccc
Confidence 77788888887 578999999999999999999875 34677778877666
No 40
>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A ....
Probab=98.54 E-value=7.4e-06 Score=64.98 Aligned_cols=115 Identities=17% Similarity=0.224 Sum_probs=69.7
Q ss_pred cccHHHHH-HhCCCCCCceEEEEEcCcEEEe--eEEEeccccCEEEEecCCCceEEEeeeecCCCCcccceeEEEEec--
Q 035494 21 FTTISEAL-AAVPQKYEGRFVIFVATGIYEE--SVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIYDAATFVAIG-- 95 (181)
Q Consensus 21 f~TIq~Ai-~aa~~~~~~~~tI~I~~G~Y~E--~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~~~~a~~~v~~-- 95 (181)
=.-||+|| +++..+. -+|+++||+|+= .+.++. +++|.|++...+++........- .. ......+.+
T Consensus 18 t~Aiq~Ai~~~~~~~g---~~v~~P~G~Y~i~~~l~~~s---~v~l~G~g~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~ 89 (225)
T PF12708_consen 18 TAAIQAAIDAAAAAGG---GVVYFPPGTYRISGTLIIPS---NVTLRGAGGNSTILFLSGSGDSF-SV-VPGIGVFDSGN 89 (225)
T ss_dssp HHHHHHHHHHHCSTTS---EEEEE-SEEEEESS-EEE-T---TEEEEESSTTTEEEEECTTTSTS-CC-EEEEEECCSCS
T ss_pred HHHHHHhhhhcccCCC---eEEEEcCcEEEEeCCeEcCC---CeEEEccCCCeeEEEecCccccc-cc-ccceeeeecCC
Confidence 45699999 3333322 599999999993 477775 89999999888888743211100 00 001122222
Q ss_pred CC--EEEEEeEEEeCCCCCCCceEEEEE-cCCceEEEeeEEeee-eeeEEec
Q 035494 96 EG--LFAKSMGFRNIAGPENGEAVAARV-QSDRATFHNCRFEGY-KNAVWAQ 143 (181)
Q Consensus 96 ~~--~~~~nlti~N~~~~~~~qa~al~~-~~~~~~~~~c~~~g~-qdTl~~~ 143 (181)
.+ ..++||+|............++.. .+..+.+++|++... .+++++.
T Consensus 90 ~~~~~~i~nl~i~~~~~~~~~~~~~i~~~~~~~~~i~nv~~~~~~~~~i~~~ 141 (225)
T PF12708_consen 90 SNIGIQIRNLTIDGNGIDPNNNNNGIRFNSSQNVSISNVRIENSGGDGIYFN 141 (225)
T ss_dssp CCEEEEEEEEEEEETCGCE-SCEEEEEETTEEEEEEEEEEEES-SS-SEEEE
T ss_pred CCceEEEEeeEEEcccccCCCCceEEEEEeCCeEEEEeEEEEccCccEEEEE
Confidence 23 449999999876433222567777 467899999999854 5555554
No 41
>KOG1777 consensus Putative Zn-finger protein [General function prediction only]
Probab=98.04 E-value=2.9e-05 Score=68.37 Aligned_cols=154 Identities=22% Similarity=0.383 Sum_probs=96.2
Q ss_pred CCcccHHHHHHhCCCCCCceEEEEEcCcEEE-eeEEEeccccCEEEEecCCC----ceEEEeeeecC----CCCccccee
Q 035494 19 GNFTTISEALAAVPQKYEGRFVIFVATGIYE-ESVTVSKRMVNLTIIGEGSQ----KSIIVGRKSVA----DGVNIYDAA 89 (181)
Q Consensus 19 g~f~TIq~Ai~aa~~~~~~~~tI~I~~G~Y~-E~v~I~~~~~~vtl~G~~~~----~~~I~~~~~~~----~g~~~~~~a 89 (181)
..|..|.+|+..+...+. .-.||+..|+|+ |.+.|+. +|.|+|.++. .+++++..... +. .-..--
T Consensus 30 ~~fD~iEea~~~l~e~~~-e~LIFlH~G~~e~~~i~I~s---dvqiiGAs~~dia~sVvle~~~~t~l~F~~~-AY~Gy~ 104 (625)
T KOG1777|consen 30 QCFDHIEEALRFLDENDE-EKLIFLHEGTHETETIRITS---DVQIIGASPSDIATSVVLEGRHATTLEFQES-AYVGYV 104 (625)
T ss_pred HhhhhHHHHhhhcccccc-cceEEEEeccccceEEEEcC---CeeEeccCCccceeeEEEecccccEEEEeec-ceEEEE
Confidence 368999999999876643 347999999999 7899986 8999999764 45677654210 00 000000
Q ss_pred EEEEecC---------------CEEEEEeEEEeCCCC-------------------CCCceEEEEEc-CCceEEEeeEEe
Q 035494 90 TFVAIGE---------------GLFAKSMGFRNIAGP-------------------ENGEAVAARVQ-SDRATFHNCRFE 134 (181)
Q Consensus 90 ~~~v~~~---------------~~~~~nlti~N~~~~-------------------~~~qa~al~~~-~~~~~~~~c~~~ 134 (181)
|+..+.+ .=.++.+.|+.+.+. .+-..++|++. --.-.+++|.|.
T Consensus 105 Tvkf~~d~~h~~h~~ld~~~d~~p~ie~c~i~s~~~~g~Avcv~g~a~P~~~~c~isDceNvglyvTd~a~g~yEh~ei~ 184 (625)
T KOG1777|consen 105 TVKFEPDQEHHAHVCLDIEVDASPAIEECIIRSTGGVGAAVCVPGEAEPEIKLCAISDCENVGLYVTDHAQGIYEHCEIS 184 (625)
T ss_pred EEEeccccccceeEEEeeccCCCcccccccccCCCccCcccccCCccCcceeecccccCcceeEEEEeccccceecchhc
Confidence 1110000 011222223322211 12335677764 224568889988
Q ss_pred eeee-eEEecc-cceeeeccEEeccee---eEEccccEEEEeeEEEec
Q 035494 135 GYKN-AVWAQT-HRQFYRSCLITGTVD---FIFGDAATIFQNCQIMVR 177 (181)
Q Consensus 135 g~qd-Tl~~~~-~~~~~~~c~I~G~vD---fi~G~~~~~f~~c~i~~~ 177 (181)
.+.+ .+|+.. ....+++|.|.+.-| |+|-.|..+|++|+++.+
T Consensus 185 ~NalA~vwvknha~p~~R~~~ih~G~dvGiftf~hg~Gy~e~cd~~qn 232 (625)
T KOG1777|consen 185 RNALAGVWVKNHAFPTMRNCTIHHGRDVGIFTFEHGQGYFESCDIHQN 232 (625)
T ss_pred cccccceeeccccChhhhhceeecCCccceEEeccCcCCCccchHHHh
Confidence 7644 457765 455899999998777 999999999999998743
No 42
>PLN03010 polygalacturonase
Probab=97.62 E-value=0.0044 Score=54.86 Aligned_cols=123 Identities=10% Similarity=0.108 Sum_probs=65.4
Q ss_pred ccHHHHHHhCCCCCCceEEEEEcCc-EEE-eeEEEecc--ccCEEEEec------C------------------CCceEE
Q 035494 22 TTISEALAAVPQKYEGRFVIFVATG-IYE-ESVTVSKR--MVNLTIIGE------G------------------SQKSII 73 (181)
Q Consensus 22 ~TIq~Ai~aa~~~~~~~~tI~I~~G-~Y~-E~v~I~~~--~~~vtl~G~------~------------------~~~~~I 73 (181)
.-||+|++++-.+...+-+|+|.|| +|. ..|.+..+ ..+|+|.=+ . .+.+.|
T Consensus 64 ~A~~~Ai~~ac~~~g~~g~v~vP~G~~yl~~~i~l~~pc~~~~v~l~l~G~l~~~~d~~~w~~~~~~~wi~f~~v~nv~I 143 (409)
T PLN03010 64 NAFLQAWNATCGGEGNINTLLIPSGKTYLLQPIEFKGPCKSTSIKVQLDGIIVAPSNIVAWSNPKSQMWISFSTVSGLMI 143 (409)
T ss_pred HHHHHHHHHHccCCCCceEEEECCCCeEEEEeEEecCCCCCCcEEEEEccEEEccCChhhccCCCCcceEEEecccccEE
Confidence 4599999864332112349999999 787 35555420 012333211 1 012233
Q ss_pred EeeeecCCCCcc-cceeEEEEecCCEEEEEeEEEeCCCC--------------------C-CCceEEEEE-cCCceEEEe
Q 035494 74 VGRKSVADGVNI-YDAATFVAIGEGLFAKSMGFRNIAGP--------------------E-NGEAVAARV-QSDRATFHN 130 (181)
Q Consensus 74 ~~~~~~~~g~~~-~~~a~~~v~~~~~~~~nlti~N~~~~--------------------~-~~qa~al~~-~~~~~~~~~ 130 (181)
+|.. ..+|-|. ++.........++.+++|+++|+..- . ..-.-++.+ .+.++.+++
T Consensus 144 ~G~G-~IDG~G~~ww~~l~~~~~~nv~v~gitl~nsp~~~i~i~~~~nv~i~~i~I~a~~~s~NTDGiDi~~s~nV~I~n 222 (409)
T PLN03010 144 DGSG-TIDGRGSSFWEALHISKCDNLTINGITSIDSPKNHISIKTCNYVAISKINILAPETSPNTDGIDISYSTNINIFD 222 (409)
T ss_pred eece-EEeCCCccccceEEEEeecCeEEeeeEEEcCCceEEEEeccccEEEEEEEEeCCCCCCCCCceeeeccceEEEEe
Confidence 3321 1233222 22233333467888888888887520 0 001124555 356788888
Q ss_pred eEEeeeeeeEEeccc
Q 035494 131 CRFEGYKNAVWAQTH 145 (181)
Q Consensus 131 c~~~g~qdTl~~~~~ 145 (181)
|.+...-|-+-+..+
T Consensus 223 ~~I~~gDDcIaiksg 237 (409)
T PLN03010 223 STIQTGDDCIAINSG 237 (409)
T ss_pred eEEecCCCeEEecCC
Confidence 888877777777665
No 43
>smart00656 Amb_all Amb_all domain.
Probab=97.52 E-value=0.0045 Score=49.16 Aligned_cols=108 Identities=11% Similarity=0.126 Sum_probs=73.3
Q ss_pred eEEEeccccCEEEEecCCCceEEEeeeecCCCCcccceeEEEEe-cCCEEEEEeEEEeCCCCCCCceEEEEE-cCCceEE
Q 035494 51 SVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIYDAATFVAI-GEGLFAKSMGFRNIAGPENGEAVAARV-QSDRATF 128 (181)
Q Consensus 51 ~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~~~~a~~~v~-~~~~~~~nlti~N~~~~~~~qa~al~~-~~~~~~~ 128 (181)
.|.+.. +.||.|++... .|.+ .-|.+. ++++.++||+|++.........-||.+ .+.++-+
T Consensus 11 ~i~v~s---nkTI~G~~~~~-~i~g-------------~gl~i~~~~NVIirnl~i~~~~~~~~~~~D~i~~~~~~~VwI 73 (190)
T smart00656 11 TIIINS---NKTIDGRGSKV-EIKG-------------GGLTIKSVSNVIIRNLTIHDPKPVYGSDGDAISIDGSSNVWI 73 (190)
T ss_pred eEEeCC---CCEEEecCCCc-EEEe-------------eEEEEEecceEEEeCCEEECCccCCCCCCCEEEEeCCCeEEE
Confidence 456653 89999997544 4443 245554 679999999999865422122346665 5789999
Q ss_pred EeeEEeee---------eeeEEecc---cceeeeccEEec-ceeeEEccc---------cEEEEeeEEE
Q 035494 129 HNCRFEGY---------KNAVWAQT---HRQFYRSCLITG-TVDFIFGDA---------ATIFQNCQIM 175 (181)
Q Consensus 129 ~~c~~~g~---------qdTl~~~~---~~~~~~~c~I~G-~vDfi~G~~---------~~~f~~c~i~ 175 (181)
.+|.|... .|.+..-. ...-+++|++.+ ..-.++|.+ ..-|++|.+.
T Consensus 74 DHct~s~~~~~~~~~~~~D~~~di~~~s~~vTvs~~~f~~h~~~~liG~~d~~~~~~~~~vT~h~N~~~ 142 (190)
T smart00656 74 DHVSLSGCTVTGFGDDTYDGLIDIKNGSTYVTISNNYFHNHWKVMLLGHSDSDTDDGKMRVTIAHNYFG 142 (190)
T ss_pred EccEeEcceeccCCCCCCCccEEECcccccEEEECceEecCCEEEEEccCCCccccccceEEEECcEEc
Confidence 99999987 67776432 234578899875 455777765 4667777764
No 44
>PLN02188 polygalacturonase/glycoside hydrolase family protein
Probab=97.46 E-value=0.0067 Score=53.66 Aligned_cols=150 Identities=10% Similarity=0.109 Sum_probs=84.9
Q ss_pred cHHHHHHh-CCCCCCceEEEEEcCcEEE-eeEEEec---cccC--EEEEecCC----------------CceEEEeeeec
Q 035494 23 TISEALAA-VPQKYEGRFVIFVATGIYE-ESVTVSK---RMVN--LTIIGEGS----------------QKSIIVGRKSV 79 (181)
Q Consensus 23 TIq~Ai~a-a~~~~~~~~tI~I~~G~Y~-E~v~I~~---~~~~--vtl~G~~~----------------~~~~I~~~~~~ 79 (181)
-||+|+++ .... ..-+|+|.||+|. ..|.+.. .+.+ |+|.+... +...|+|...
T Consensus 55 Ai~~Ai~~aC~~~--Ggg~V~vP~G~yl~g~i~lkgpc~~~s~v~l~L~~s~d~~~y~~~~~~i~~~~~~ni~I~G~G~- 131 (404)
T PLN02188 55 AFMAAWKAACAST--GAVTLLIPPGTYYIGPVQFHGPCTNVSSLTFTLKAATDLSRYGSGNDWIEFGWVNGLTLTGGGT- 131 (404)
T ss_pred HHHHHHHHHhccC--CCeEEEECCCeEEEEeEEeCCCcCcceeEEEEEEcCCCHHHCCCccceEEEeceeeEEEEeeEE-
Confidence 49999974 3322 2259999999999 4666641 1112 35555532 1233444321
Q ss_pred CCCCcc---------------cceeEEEE-ecCCEEEEEeEEEeCCCC--------------------C-CCceEEEEE-
Q 035494 80 ADGVNI---------------YDAATFVA-IGEGLFAKSMGFRNIAGP--------------------E-NGEAVAARV- 121 (181)
Q Consensus 80 ~~g~~~---------------~~~a~~~v-~~~~~~~~nlti~N~~~~--------------------~-~~qa~al~~- 121 (181)
.+|-+. .+...|.+ ...++.+++|+|+|+..- . ..-.-++.+
T Consensus 132 IDG~G~~ww~~~~~~~~~~~~~rP~~i~f~~~~nv~i~gitl~nSp~w~i~~~~~~~v~i~~v~I~~~~~spNtDGidi~ 211 (404)
T PLN02188 132 FDGQGAAAWPFNKCPIRKDCKLLPTSVKFVNMNNTVVRGITSVNSKFFHIALVECRNFKGSGLKISAPSDSPNTDGIHIE 211 (404)
T ss_pred EeCCCcccccccccccCCCCCcCceEEEEEeeeeEEEeCeEEEcCCCeEEEEEccccEEEEEEEEeCCCCCCCCCcEeee
Confidence 122111 11122333 456788888888876520 0 011134555
Q ss_pred cCCceEEEeeEEeeeeeeEEecccc--eeeeccEEecceeeEEcc----c------cEEEEeeEEE
Q 035494 122 QSDRATFHNCRFEGYKNAVWAQTHR--QFYRSCLITGTVDFIFGD----A------ATIFQNCQIM 175 (181)
Q Consensus 122 ~~~~~~~~~c~~~g~qdTl~~~~~~--~~~~~c~I~G~vDfi~G~----~------~~~f~~c~i~ 175 (181)
.+.++.+.+|.|...-|-+-+..+. -.+++|...+.-.+-+|. . ..+|+||++.
T Consensus 212 ~s~nV~I~n~~I~~GDDcIaiksg~~nI~I~n~~c~~ghGisiGSlG~~~~~~~V~nV~v~n~~~~ 277 (404)
T PLN02188 212 RSSGVYISDSRIGTGDDCISIGQGNSQVTITRIRCGPGHGISVGSLGRYPNEGDVTGLVVRDCTFT 277 (404)
T ss_pred CcccEEEEeeEEeCCCcEEEEccCCccEEEEEEEEcCCCcEEeCCCCCCCcCCcEEEEEEEeeEEE
Confidence 3568888888888888888886554 367777776555566665 1 2467777765
No 45
>PLN02671 pectinesterase
Probab=97.27 E-value=0.012 Score=51.17 Aligned_cols=82 Identities=18% Similarity=0.325 Sum_probs=62.2
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc---eeeEEc
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT---VDFIFG 163 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~---vDfi~G 163 (181)
.+..|.+.++...++++.|.- .| -.|+...+|..|++|.|.|.=|-+|- .+..+|++|.|.-. -.+|--
T Consensus 177 QAVALrv~gDra~f~~c~f~G------~Q-DTLy~~~gR~yf~~CyIeG~VDFIFG-~g~A~Fe~C~I~s~~~~~G~ITA 248 (359)
T PLN02671 177 QAVALRISGDKAFFYKVRVLG------AQ-DTLLDETGSHYFYQCYIQGSVDFIFG-NAKSLYQDCVIQSTAKRSGAIAA 248 (359)
T ss_pred cEEEEEEcCccEEEEcceEec------cc-cccEeCCCcEEEEecEEEEeccEEec-ceeEEEeccEEEEecCCCeEEEe
Confidence 467788899999999999992 33 35667788999999999999999984 47889999999732 235543
Q ss_pred cc--------cEEEEeeEEEe
Q 035494 164 DA--------ATIFQNCQIMV 176 (181)
Q Consensus 164 ~~--------~~~f~~c~i~~ 176 (181)
.+ .=+|.+|+|..
T Consensus 249 ~~r~~~~~~~GfvF~~C~itg 269 (359)
T PLN02671 249 HHRDSPTEDTGFSFVNCVING 269 (359)
T ss_pred eccCCCCCCccEEEEccEEcc
Confidence 22 24788888753
No 46
>PLN02793 Probable polygalacturonase
Probab=97.18 E-value=0.034 Score=49.83 Aligned_cols=71 Identities=7% Similarity=0.004 Sum_probs=42.1
Q ss_pred ecCCEEEEEeEEEeCCCC--------------------C-CCceEEEEE-cCCceEEEeeEEeeeeeeEEeccc--ceee
Q 035494 94 IGEGLFAKSMGFRNIAGP--------------------E-NGEAVAARV-QSDRATFHNCRFEGYKNAVWAQTH--RQFY 149 (181)
Q Consensus 94 ~~~~~~~~nlti~N~~~~--------------------~-~~qa~al~~-~~~~~~~~~c~~~g~qdTl~~~~~--~~~~ 149 (181)
...++++++|+++|+..- . ..-.-++.+ .+.++.+++|.|...-|-+.+..+ +-.+
T Consensus 184 ~~~nv~v~gitl~nSp~~~i~~~~~~nv~i~~l~I~~p~~spNTDGIdi~~s~nV~I~n~~I~~gDDcIaik~~s~nI~I 263 (443)
T PLN02793 184 KCKDLRVENLNVIDSQQMHIAFTNCRRVTISGLKVIAPATSPNTDGIHISASRGVVIKDSIVRTGDDCISIVGNSSRIKI 263 (443)
T ss_pred eeccEEEECeEEEcCCCeEEEEEccCcEEEEEEEEECCCCCCCCCcEeeeccceEEEEeCEEeCCCCeEEecCCcCCEEE
Confidence 467888888888887520 0 001124555 345777777777777777777542 3356
Q ss_pred eccEEecceeeEEcc
Q 035494 150 RSCLITGTVDFIFGD 164 (181)
Q Consensus 150 ~~c~I~G~vDfi~G~ 164 (181)
+||...+.-.+.+|.
T Consensus 264 ~n~~c~~GhGisIGS 278 (443)
T PLN02793 264 RNIACGPGHGISIGS 278 (443)
T ss_pred EEeEEeCCccEEEec
Confidence 777664433455554
No 47
>PLN03003 Probable polygalacturonase At3g15720
Probab=97.08 E-value=0.066 Score=48.10 Aligned_cols=70 Identities=7% Similarity=0.015 Sum_probs=42.1
Q ss_pred ecCCEEEEEeEEEeCCCC---------------------CCCceEEEEE-cCCceEEEeeEEeeeeeeEEecccc--eee
Q 035494 94 IGEGLFAKSMGFRNIAGP---------------------ENGEAVAARV-QSDRATFHNCRFEGYKNAVWAQTHR--QFY 149 (181)
Q Consensus 94 ~~~~~~~~nlti~N~~~~---------------------~~~qa~al~~-~~~~~~~~~c~~~g~qdTl~~~~~~--~~~ 149 (181)
...++.+++|+++|+..- ...-.-++.+ .+.++.+++|.|...-|-+-+..+. -.+
T Consensus 145 ~~~nv~I~gitl~NSp~w~i~i~~c~nV~i~~l~I~ap~~spNTDGIDi~~S~nV~I~n~~I~tGDDCIaiksgs~NI~I 224 (456)
T PLN03003 145 SCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHI 224 (456)
T ss_pred ecCCcEEeCeEEecCCcEEEEEeccccEEEEEEEEeCCCCCCCCCcEeecCcceEEEEecEEecCCCeEEeCCCCccEEE
Confidence 456777888887776420 0011125555 3467888888888777888777653 366
Q ss_pred eccEEecceeeEEc
Q 035494 150 RSCLITGTVDFIFG 163 (181)
Q Consensus 150 ~~c~I~G~vDfi~G 163 (181)
++|+..+.-..-.|
T Consensus 225 ~n~~c~~GHGISIG 238 (456)
T PLN03003 225 SGIDCGPGHGISIG 238 (456)
T ss_pred EeeEEECCCCeEEe
Confidence 77765433334444
No 48
>PLN02218 polygalacturonase ADPG
Probab=97.07 E-value=0.055 Score=48.33 Aligned_cols=71 Identities=8% Similarity=0.060 Sum_probs=42.7
Q ss_pred ecCCEEEEEeEEEeCCCC--------------------C-CCceEEEEE-cCCceEEEeeEEeeeeeeEEecccc--eee
Q 035494 94 IGEGLFAKSMGFRNIAGP--------------------E-NGEAVAARV-QSDRATFHNCRFEGYKNAVWAQTHR--QFY 149 (181)
Q Consensus 94 ~~~~~~~~nlti~N~~~~--------------------~-~~qa~al~~-~~~~~~~~~c~~~g~qdTl~~~~~~--~~~ 149 (181)
...++++++|+|+|+..- . ..=.-++.+ .+.++.+++|.|...-|-+-+.++. -.+
T Consensus 199 ~~~nv~I~gitl~nSp~w~i~~~~~~nV~i~~v~I~a~~~spNTDGIdi~ss~nV~I~n~~I~tGDDcIaIksgs~nI~I 278 (431)
T PLN02218 199 NSKSLIVKNLRVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSNSIIGTGDDCISIESGSQNVQI 278 (431)
T ss_pred ccccEEEeCeEEEcCCCEEEEEEceeeEEEEEEEEeCCCCCCCCCcEeecccceEEEEccEEecCCceEEecCCCceEEE
Confidence 468888888888887520 0 001124555 3456777777777777777776553 356
Q ss_pred eccEEecceeeEEcc
Q 035494 150 RSCLITGTVDFIFGD 164 (181)
Q Consensus 150 ~~c~I~G~vDfi~G~ 164 (181)
++|+..+.-.+-.|.
T Consensus 279 ~n~~c~~GHGisIGS 293 (431)
T PLN02218 279 NDITCGPGHGISIGS 293 (431)
T ss_pred EeEEEECCCCEEECc
Confidence 777765433355554
No 49
>PF01095 Pectinesterase: Pectinesterase; InterPro: IPR000070 Pectinesterase 3.1.1.11 from EC (pectin methylesterase) catalyses the de-esterification of pectin into pectate and methanol. Pectin is one of the main components of the plant cell wall. In plants, pectinesterase plays an important role in cell wall metabolism during fruit ripening. In plant bacterial pathogens such as Erwinia carotovora and in fungal pathogens such as Aspergillus niger, pectinesterase is involved in maceration and soft-rotting of plant tissue. Plant pectinesterases are regulated by pectinesterase inhibitors, which are ineffective against microbial enzymes []. Prokaryotic and eukaryotic pectinesterases share a few regions of sequence similarity. The crystal structure of pectinesterase from Erwinia chrysanthemi revealed a beta-helix structure similar to that found in pectinolytic enzymes, though it is different from most structures of esterases []. The putative catalytic residues are in a similar location to those of the active site and substrate-binding cleft of pectate lyase.; GO: 0030599 pectinesterase activity, 0042545 cell wall modification, 0005618 cell wall; PDB: 1QJV_B 1XG2_A 1GQ8_A 2NTQ_A 2NTP_A 2NT9_A 2NT6_B 2NSP_B 2NTB_A 2NST_A ....
Probab=97.04 E-value=0.0092 Score=50.72 Aligned_cols=84 Identities=19% Similarity=0.365 Sum_probs=58.8
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc------eee
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT------VDF 160 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~------vDf 160 (181)
....|.+.++...++++.|.. .|. .|+..+.|..|++|.|.|.=|=+|-. +..+|.+|.|.-. .-+
T Consensus 106 qAvAl~~~~d~~~f~~c~~~g------~QD-TL~~~~~r~y~~~c~IeG~vDFIfG~-~~a~f~~c~i~~~~~~~~~~~~ 177 (298)
T PF01095_consen 106 QAVALRVSGDRAAFYNCRFLG------YQD-TLYANGGRQYFKNCYIEGNVDFIFGN-GTAVFENCTIHSRRPGGGQGGY 177 (298)
T ss_dssp ---SEEET-TSEEEEEEEEE-------STT--EEE-SSEEEEES-EEEESEEEEEES-SEEEEES-EEEE--SSTSSTEE
T ss_pred ceeeeeecCCcEEEEEeEEcc------ccc-eeeeccceeEEEeeEEEecCcEEECC-eeEEeeeeEEEEecccccccee
Confidence 345677889999999999983 332 67788899999999999999999886 6789999999932 346
Q ss_pred EEccc--------cEEEEeeEEEecC
Q 035494 161 IFGDA--------ATIFQNCQIMVRK 178 (181)
Q Consensus 161 i~G~~--------~~~f~~c~i~~~~ 178 (181)
|.-.+ .-+|.+|.|....
T Consensus 178 ItA~~r~~~~~~~G~vF~~c~i~~~~ 203 (298)
T PF01095_consen 178 ITAQGRTSPSQKSGFVFDNCTITGDS 203 (298)
T ss_dssp EEEE---CTTSS-EEEEES-EEEEST
T ss_pred EEeCCccccCCCeEEEEEEeEEecCc
Confidence 65543 3499999998764
No 50
>PLN02634 probable pectinesterase
Probab=97.02 E-value=0.018 Score=50.18 Aligned_cols=83 Identities=20% Similarity=0.415 Sum_probs=63.6
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc---eeeEE
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT---VDFIF 162 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~---vDfi~ 162 (181)
..+..|.+.++...++++.|.- .| -.|+...+|..|++|.|.|.=|-+| +.+..+|++|.|.-. ..+|.
T Consensus 172 ~QAVAl~v~gDra~f~~C~f~G------~Q-DTL~~~~gR~yf~~CyIeG~VDFIF-G~g~a~Fe~C~I~s~~~~~g~IT 243 (359)
T PLN02634 172 WQAVAFRISGDKAFFFGCGFYG------AQ-DTLCDDAGRHYFKECYIEGSIDFIF-GNGRSMYKDCELHSIASRFGSIA 243 (359)
T ss_pred CceEEEEecCCcEEEEEeEEec------cc-ceeeeCCCCEEEEeeEEcccccEEc-CCceEEEeccEEEEecCCCcEEE
Confidence 3566788899999999999992 33 3577788899999999999999888 447889999999842 34665
Q ss_pred ccc--------cEEEEeeEEEe
Q 035494 163 GDA--------ATIFQNCQIMV 176 (181)
Q Consensus 163 G~~--------~~~f~~c~i~~ 176 (181)
..+ .=+|.+|+|..
T Consensus 244 A~~R~~~~~~~GfvF~~C~vtg 265 (359)
T PLN02634 244 AHGRTCPEEKTGFAFVGCRVTG 265 (359)
T ss_pred eCCCCCCCCCcEEEEEcCEEcC
Confidence 432 25788898753
No 51
>PLN02480 Probable pectinesterase
Probab=96.89 E-value=0.03 Score=48.51 Aligned_cols=82 Identities=12% Similarity=0.202 Sum_probs=61.2
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecce-------e
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTV-------D 159 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~v-------D 159 (181)
.+..|.+.++...++|+.|. +.| -.|+...+|..|++|.|.|.=|=+|-. +..+|++|.|.-.- .
T Consensus 156 QAVAl~v~gDra~f~~c~f~------G~Q-DTLy~~~gR~yf~~C~IeG~VDFIFG~-g~a~fe~C~i~s~~~~~~~~~G 227 (343)
T PLN02480 156 QSVAAFVGADKVAFYHCAFY------STH-NTLFDYKGRHYYHSCYIQGSIDFIFGR-GRSIFHNCEIFVIADRRVKIYG 227 (343)
T ss_pred ceEEEEecCCcEEEEeeEEe------ccc-ceeEeCCCCEEEEeCEEEeeeeEEccc-eeEEEEccEEEEecCCCCCCce
Confidence 34556678999999999998 334 357778889999999999998888765 77899999998532 3
Q ss_pred eEEccc-------cEEEEeeEEEe
Q 035494 160 FIFGDA-------ATIFQNCQIMV 176 (181)
Q Consensus 160 fi~G~~-------~~~f~~c~i~~ 176 (181)
+|.-.+ .-+|.+|+|..
T Consensus 228 ~ITA~~r~~~~~~GfvF~~C~i~g 251 (343)
T PLN02480 228 SITAHNRESEDNSGFVFIKGKVYG 251 (343)
T ss_pred EEEcCCCCCCCCCEEEEECCEEcc
Confidence 454332 35788888754
No 52
>PF01696 Adeno_E1B_55K: Adenovirus EB1 55K protein / large t-antigen; InterPro: IPR002612 This family consists of adenovirus E1B 55 kDa protein or large t-antigen. E1B 55 kDa binds p53 the tumor suppressor protein converting it from a transcriptional activator which responds to damaged DNA in to an unregulated repressor of genes with a p53 binding site []. This protects the virus against p53 induced host antiviral responses and prevents apoptosis as induced by the adenovirus E1A protein []. The E1B region of adenovirus encodes two proteins E1B 55 kDa, the large t-antigen as found in this family and E1B 19 kDa IPR002924 from INTERPRO, the small t-antigen. Both of these proteins inhibit E1A induced apoptosis.
Probab=96.78 E-value=0.084 Score=46.34 Aligned_cols=128 Identities=23% Similarity=0.379 Sum_probs=77.4
Q ss_pred cHHHHHHhCCCCCCceEEEEEcCc-EEE--eeEEEeccccCEEEEecCCCceEEEeeeecCCCCcccceeEEEE------
Q 035494 23 TISEALAAVPQKYEGRFVIFVATG-IYE--ESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIYDAATFVA------ 93 (181)
Q Consensus 23 TIq~Ai~aa~~~~~~~~tI~I~~G-~Y~--E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~~~~a~~~v------ 93 (181)
.+.+||+.= .+|.+.|| +|+ -+|.|++ ...|+|.+. .+.|.+.... + |.+
T Consensus 56 Dle~~I~~h-------aKVaL~Pg~~Y~i~~~V~I~~---~cYIiGnGA-~V~v~~~~~~---------~-f~v~~~~~~ 114 (386)
T PF01696_consen 56 DLEEAIRQH-------AKVALRPGAVYVIRKPVNIRS---CCYIIGNGA-TVRVNGPDRV---------A-FRVCMQSMG 114 (386)
T ss_pred CHHHHHHhc-------CEEEeCCCCEEEEeeeEEecc---eEEEECCCE-EEEEeCCCCc---------e-EEEEcCCCC
Confidence 688888873 27999999 677 3788887 799999883 3555554321 1 322
Q ss_pred ---ec-CCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeee-eeeEEecccceeeeccEEecceeeEEcc----
Q 035494 94 ---IG-EGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGY-KNAVWAQTHRQFYRSCLITGTVDFIFGD---- 164 (181)
Q Consensus 94 ---~~-~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~-qdTl~~~~~~~~~~~c~I~G~vDfi~G~---- 164 (181)
.+ .++++.|+.|.... ..+ ..+.....++.|.+|.|.|. ...|..+.+ .-.+.|+--|-.==|-+.
T Consensus 115 P~V~gM~~VtF~ni~F~~~~---~~~-g~~f~~~t~~~~hgC~F~gf~g~cl~~~~~-~~VrGC~F~~C~~gi~~~~~~~ 189 (386)
T PF01696_consen 115 PGVVGMEGVTFVNIRFEGRD---TFS-GVVFHANTNTLFHGCSFFGFHGTCLESWAG-GEVRGCTFYGCWKGIVSRGKSK 189 (386)
T ss_pred CeEeeeeeeEEEEEEEecCC---ccc-eeEEEecceEEEEeeEEecCcceeEEEcCC-cEEeeeEEEEEEEEeecCCcce
Confidence 22 35667777776442 122 23334677899999999998 555555533 333344433332223333
Q ss_pred ---ccEEEEeeEEEe
Q 035494 165 ---AATIFQNCQIMV 176 (181)
Q Consensus 165 ---~~~~f~~c~i~~ 176 (181)
....||.|.|-.
T Consensus 190 lsVk~C~FekC~igi 204 (386)
T PF01696_consen 190 LSVKKCVFEKCVIGI 204 (386)
T ss_pred EEeeheeeeheEEEE
Confidence 346788887643
No 53
>PLN02773 pectinesterase
Probab=96.76 E-value=0.02 Score=49.10 Aligned_cols=83 Identities=14% Similarity=0.264 Sum_probs=63.1
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc-eeeEEccc
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT-VDFIFGDA 165 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~-vDfi~G~~ 165 (181)
....|.+.++...++++.|.- .| -.|+.+..|..|++|.|.|.=|=+| +.+..+|++|.|.-. -.+|.-.+
T Consensus 121 QAvAl~v~gDr~~f~~c~~~G------~Q-DTL~~~~gr~yf~~c~IeG~VDFIF-G~g~a~Fe~c~i~s~~~g~ITA~~ 192 (317)
T PLN02773 121 QAVAIRVTADRCAFYNCRFLG------WQ-DTLYLHYGKQYLRDCYIEGSVDFIF-GNSTALLEHCHIHCKSAGFITAQS 192 (317)
T ss_pred cEEEEEecCccEEEEccEeec------cc-ceeEeCCCCEEEEeeEEeecccEEe-eccEEEEEeeEEEEccCcEEECCC
Confidence 456788899999999999992 33 3777888899999999999999888 447789999999742 23554321
Q ss_pred --------cEEEEeeEEEec
Q 035494 166 --------ATIFQNCQIMVR 177 (181)
Q Consensus 166 --------~~~f~~c~i~~~ 177 (181)
.=+|.+|+|...
T Consensus 193 r~~~~~~~GfvF~~c~it~~ 212 (317)
T PLN02773 193 RKSSQESTGYVFLRCVITGN 212 (317)
T ss_pred CCCCCCCceEEEEccEEecC
Confidence 357889988754
No 54
>PLN02176 putative pectinesterase
Probab=96.73 E-value=0.019 Score=49.74 Aligned_cols=82 Identities=13% Similarity=0.250 Sum_probs=63.4
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc---------
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT--------- 157 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~--------- 157 (181)
..-.|.+.++...++++.|.- .| -.|+...+|..|++|.|.|.=|-++ +.+..+|++|.|.-.
T Consensus 147 QAVAl~v~gDr~~f~~C~f~G------~Q-DTLy~~~gRqyf~~CyIeG~VDFIF-G~a~a~Fe~C~I~s~~~~~~~~~~ 218 (340)
T PLN02176 147 PAVAARMLGDKYAIIDSSFDG------FQ-DTLFDGKGRHYYKRCVISGGIDFIF-GYAQSIFEGCTLKLTLGIYPPNEP 218 (340)
T ss_pred ceEEEEecCccEEEEccEEec------cc-ceeEeCCcCEEEEecEEEecccEEe-cCceEEEeccEEEEecccCCCCCC
Confidence 456678889999999999992 33 3677788999999999999999998 447889999999732
Q ss_pred eeeEEccc--------cEEEEeeEEEe
Q 035494 158 VDFIFGDA--------ATIFQNCQIMV 176 (181)
Q Consensus 158 vDfi~G~~--------~~~f~~c~i~~ 176 (181)
..+|.-.+ .=+|.+|+|..
T Consensus 219 ~g~ITA~~r~~~~~~~GfvF~~C~itg 245 (340)
T PLN02176 219 YGTITAQGRPSPSDKGGFVFKDCTVTG 245 (340)
T ss_pred cEEEEeCCCCCCCCCcEEEEECCEEcc
Confidence 34565322 35799998864
No 55
>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]
Probab=96.72 E-value=0.094 Score=44.67 Aligned_cols=93 Identities=11% Similarity=0.198 Sum_probs=58.2
Q ss_pred cCEEEEecCCCceEEEeeeecCCCCcccceeEEEEe-cCCEEEEEeEEEeCCCCCC-CceEEEEEcCCceEEEeeEEee-
Q 035494 59 VNLTIIGEGSQKSIIVGRKSVADGVNIYDAATFVAI-GEGLFAKSMGFRNIAGPEN-GEAVAARVQSDRATFHNCRFEG- 135 (181)
Q Consensus 59 ~~vtl~G~~~~~~~I~~~~~~~~g~~~~~~a~~~v~-~~~~~~~nlti~N~~~~~~-~qa~al~~~~~~~~~~~c~~~g- 135 (181)
.+.||.|.+.+.+++- .-|.++ ++++.++||+|+-.+-... -.+.-|.-.+.++-+.+|.|.+
T Consensus 101 sNkTivG~g~~a~~~g--------------~gl~i~~a~NVIirNltf~~~~~~d~~~D~Isi~~~~~nIWIDH~tf~~~ 166 (345)
T COG3866 101 SNKTIVGSGADATLVG--------------GGLKIRDAGNVIIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFSGG 166 (345)
T ss_pred cccEEEeeccccEEEe--------------ceEEEEeCCcEEEEeeEEEeeccCCCCCCcEEeccCCeEEEEEeeEeccc
Confidence 3667777665544433 245565 8999999999998872111 1334444467789999999997
Q ss_pred -------eeeeEEec-cccee--eeccEEe-cceeeEEccc
Q 035494 136 -------YKNAVWAQ-THRQF--YRSCLIT-GTVDFIFGDA 165 (181)
Q Consensus 136 -------~qdTl~~~-~~~~~--~~~c~I~-G~vDfi~G~~ 165 (181)
..|.|..- .+..| +++|+.+ .+--.|+|..
T Consensus 167 s~~~~~~h~DGl~Dik~~AnyITiS~n~fhdh~Kssl~G~s 207 (345)
T COG3866 167 SYNASGSHGDGLVDIKKDANYITISYNKFHDHDKSSLLGSS 207 (345)
T ss_pred cccccccCCCccEEeccCCcEEEEEeeeeecCCeeeeeccC
Confidence 56666653 23222 5666665 2445666653
No 56
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=96.63 E-value=0.018 Score=52.86 Aligned_cols=83 Identities=19% Similarity=0.363 Sum_probs=66.5
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEe----------
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLIT---------- 155 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~---------- 155 (181)
.....|.+.++...++++.|.- .| -.|+.++.|.-|++|.|.|.=|=+|-. +..+|++|.|.
T Consensus 348 ~QAVAlrv~~D~~~f~~c~~~G------~Q-DTLy~~~~rq~y~~C~I~GtVDFIFG~-a~avfq~c~i~~~~~~~~~~~ 419 (553)
T PLN02708 348 HQAVAFRSDSDLSVIENCEFLG------NQ-DTLYAHSLRQFYKSCRIQGNVDFIFGN-SAAVFQDCAILIAPRQLKPEK 419 (553)
T ss_pred CceEEEEecCCcEEEEeeeeee------cc-ccceeCCCceEEEeeEEeecCCEEecC-ceEEEEccEEEEeccccCCCC
Confidence 3567788899999999999993 34 377888999999999999999988866 78899999997
Q ss_pred cceeeEEccc--------cEEEEeeEEEe
Q 035494 156 GTVDFIFGDA--------ATIFQNCQIMV 176 (181)
Q Consensus 156 G~vDfi~G~~--------~~~f~~c~i~~ 176 (181)
|...+|--.+ .-+|++|+|..
T Consensus 420 ~~~~~iTA~~r~~~~~~~G~vf~~C~it~ 448 (553)
T PLN02708 420 GENNAVTAHGRTDPAQSTGFVFQNCLING 448 (553)
T ss_pred CCceEEEeCCCCCCCCCceEEEEccEEec
Confidence 3345666443 23999999965
No 57
>PLN02497 probable pectinesterase
Probab=96.52 E-value=0.029 Score=48.39 Aligned_cols=82 Identities=22% Similarity=0.384 Sum_probs=63.4
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc--------e
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT--------V 158 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~--------v 158 (181)
.+-.|.+.++...++++.|.- .| -.|+...+|..|++|.|.|.=|=+|-. ++.+|++|.|.-. .
T Consensus 141 QAVAl~v~gDr~~fy~C~f~G------~Q-DTLy~~~gRqyf~~C~IeG~VDFIFG~-g~a~Fe~C~I~s~~~~~~~~~~ 212 (331)
T PLN02497 141 PAVAAMIGGDKSAFYSCGFAG------VQ-DTLWDSDGRHYFKRCTIQGAVDFIFGS-GQSIYESCVIQVLGGQLEPGLA 212 (331)
T ss_pred ceEEEEecCCcEEEEeeEEec------cc-cceeeCCCcEEEEeCEEEecccEEccC-ceEEEEccEEEEecCcCCCCCc
Confidence 356778889999999999993 33 256778889999999999999988875 7789999999731 3
Q ss_pred eeEEccc--------cEEEEeeEEEe
Q 035494 159 DFIFGDA--------ATIFQNCQIMV 176 (181)
Q Consensus 159 Dfi~G~~--------~~~f~~c~i~~ 176 (181)
.+|.-.+ .=+|.+|.|..
T Consensus 213 g~ITA~~r~~~~~~~GfvF~~C~itg 238 (331)
T PLN02497 213 GFITAQGRTNPYDANGFVFKNCLVYG 238 (331)
T ss_pred eEEEecCCCCCCCCceEEEEccEEcc
Confidence 5665432 35799998864
No 58
>PLN02432 putative pectinesterase
Probab=96.50 E-value=0.035 Score=47.10 Aligned_cols=82 Identities=13% Similarity=0.235 Sum_probs=62.9
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc---eeeEEc
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT---VDFIFG 163 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~---vDfi~G 163 (181)
.+..|.+.++...++++.|.- .| -.|+.+.+|..|++|-|.|.=|=+| +.+..+|++|.|.-. ..+|--
T Consensus 112 QAvAl~v~gDr~~f~~c~~~G------~Q-DTLy~~~gr~yf~~c~I~G~VDFIF-G~g~a~Fe~c~i~s~~~~~g~itA 183 (293)
T PLN02432 112 KAVALRVAGDRAAFYGCRILS------YQ-DTLLDDTGRHYYRNCYIEGATDFIC-GNAASLFEKCHLHSLSPNNGAITA 183 (293)
T ss_pred ceEEEEEcCCcEEEEcceEec------cc-ceeEECCCCEEEEeCEEEecccEEe-cCceEEEEeeEEEEecCCCCeEEe
Confidence 467888899999999999992 33 3677888899999999999999888 457889999999732 235543
Q ss_pred c--------ccEEEEeeEEEe
Q 035494 164 D--------AATIFQNCQIMV 176 (181)
Q Consensus 164 ~--------~~~~f~~c~i~~ 176 (181)
. ..=+|.+|+|..
T Consensus 184 ~~r~~~~~~~Gfvf~~c~itg 204 (293)
T PLN02432 184 QQRTSASENTGFTFLGCKLTG 204 (293)
T ss_pred cCCCCCCCCceEEEEeeEEcc
Confidence 2 135799998863
No 59
>PLN02665 pectinesterase family protein
Probab=96.47 E-value=0.078 Score=46.38 Aligned_cols=82 Identities=16% Similarity=0.240 Sum_probs=62.2
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc----eeeEE
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT----VDFIF 162 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~----vDfi~ 162 (181)
.+..|.+.++...++|+.|. +.| -.|+.+.+|..|++|.|.|.=|=+| +.++.+|++|.|.-. ..+|-
T Consensus 178 QAVAl~v~gDka~f~~C~f~------G~Q-DTL~~~~gr~yf~~CyIeG~VDFIF-G~g~a~fe~C~i~s~~~~~~g~IT 249 (366)
T PLN02665 178 QAVAMRISGDKAAFYNCRFI------GFQ-DTLCDDKGRHFFKDCYIEGTVDFIF-GSGKSLYLNTELHVVGDGGLRVIT 249 (366)
T ss_pred ceEEEEEcCCcEEEEcceec------ccc-ceeEeCCCCEEEEeeEEeeccceec-cccceeeEccEEEEecCCCcEEEE
Confidence 46778889999999999998 233 3577788899999999999999888 447889999999832 23454
Q ss_pred ccc--------cEEEEeeEEEe
Q 035494 163 GDA--------ATIFQNCQIMV 176 (181)
Q Consensus 163 G~~--------~~~f~~c~i~~ 176 (181)
-.+ .=+|.+|+|..
T Consensus 250 A~~r~~~~~~~GfvF~~C~itg 271 (366)
T PLN02665 250 AQARNSEAEDSGFSFVHCKVTG 271 (366)
T ss_pred cCCCCCCCCCceEEEEeeEEec
Confidence 432 24788888865
No 60
>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O. To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].
Probab=96.46 E-value=0.18 Score=40.73 Aligned_cols=81 Identities=7% Similarity=0.007 Sum_probs=51.6
Q ss_pred EEEEecCCEEEEEeEEEeCCCCCCCceEEEEE-cCCceEEEeeEEeeeeeeEEecccc-eeeeccEEeccee--eEEccc
Q 035494 90 TFVAIGEGLFAKSMGFRNIAGPENGEAVAARV-QSDRATFHNCRFEGYKNAVWAQTHR-QFYRSCLITGTVD--FIFGDA 165 (181)
Q Consensus 90 ~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~-~~~~~~~~~c~~~g~qdTl~~~~~~-~~~~~c~I~G~vD--fi~G~~ 165 (181)
.....+.+.++++.+|.+.. .++.+ .+.+..+.++.|.+....+++.... ..++++.|.+.-. ++.+..
T Consensus 60 I~~~~s~~~~i~~n~i~~n~-------~Gi~l~~s~~~~I~~N~i~~n~~GI~l~~s~~~~I~~N~i~~~~~GI~l~~s~ 132 (236)
T PF05048_consen 60 IHLMGSSNNTIENNTISNNG-------YGIYLMGSSNNTISNNTISNNGYGIYLYGSSNNTISNNTISNNGYGIYLSSSS 132 (236)
T ss_pred EEEEccCCCEEEeEEEEccC-------CCEEEEcCCCcEEECCEecCCCceEEEeeCCceEEECcEEeCCCEEEEEEeCC
Confidence 44444566888888888754 23444 2333489999999888899887654 3566677764333 444445
Q ss_pred cEEEEeeEEEec
Q 035494 166 ATIFQNCQIMVR 177 (181)
Q Consensus 166 ~~~f~~c~i~~~ 177 (181)
...+++++|...
T Consensus 133 ~n~I~~N~i~~n 144 (236)
T PF05048_consen 133 NNTITGNTISNN 144 (236)
T ss_pred CCEEECeEEeCC
Confidence 666777776543
No 61
>PF00544 Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pectate lyase 4.2.2.2 from EC is an enzyme involved in the maceration and soft rotting of plant tissue. Pectate lyase is responsible for the eliminative cleavage of pectate, yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups at their non-reducing ends. The protein is maximally expressed late in pollen development. It has been suggested that the pollen expression of pectate lyase genes might relate to a requirement for pectin degradation during pollen tube growth []. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail [,]. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Amb a 1, Amb a 2, Amb a 3, Cha o 1, Cup a 1, Cry j 1, Jun a 1. Two of the major allergens in the pollen of short ragweed (Ambrosia artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII has been deduced and has been shown to share ~65% sequence identity with the Amb alpha I multigene family of allergens []. Members of the Amb aI/aII family include Nicotiana tabacum (Common tobacco) pectate lyase, which is similar to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in Solanum lycopersicum (Tomato) (Lycopersicon esculentum) []; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica (Japanese cedar) - the most common pollen allergen in Japan []; and P56 and P59, which share sequence similarity with pectate lyases of plant pathogenic bacteria [].; PDB: 1O8M_A 1O8K_A 1O8E_A 1O8H_A 2PEC_A 1PLU_A 1O8I_A 1O8J_A 1O8D_A 1O8F_A ....
Probab=96.31 E-value=0.034 Score=44.45 Aligned_cols=106 Identities=18% Similarity=0.373 Sum_probs=64.1
Q ss_pred cCcEEE--eeEEEeccccCEEEEecCCCceEEEeeeecCCCCcccceeEEEEecCCEEEEEeEEEeC---------CCC-
Q 035494 44 ATGIYE--ESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIYDAATFVAIGEGLFAKSMGFRNI---------AGP- 111 (181)
Q Consensus 44 ~~G~Y~--E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~~~~a~~~v~~~~~~~~nlti~N~---------~~~- 111 (181)
-.|+.. +++.+.. +.||+|.+.+. .|.+. +..+.-.++++.++||+|++. ...
T Consensus 7 ~~g~i~~~~~i~v~s---nkTi~G~g~~~-~i~~~-----------G~~i~~~~~NVIirNl~~~~~~~~~~~~~~~~~~ 71 (200)
T PF00544_consen 7 VSGTIDLKSPISVGS---NKTIIGIGAGA-TIIGG-----------GLRIIKGASNVIIRNLRFRNVPVDPGPDWSGDGD 71 (200)
T ss_dssp EHHCCHHHCEEEEES---SEEEEEETTTT-EEESS-----------EEEEEESCEEEEEES-EEECEEEECSTEEETTEE
T ss_pred EEeEEccCCeEEECC---CcEEEEccCCe-EEECc-----------eEEEecCCCeEEEECCEEEeccccCCcccCCCcc
Confidence 346654 5666664 78999987653 45542 122222468999999999982 111
Q ss_pred -CCCceEEEEEcCCceEEEeeEEeee--------eeeEEec-cc--ceeeeccEEecc-eeeEEccc
Q 035494 112 -ENGEAVAARVQSDRATFHNCRFEGY--------KNAVWAQ-TH--RQFYRSCLITGT-VDFIFGDA 165 (181)
Q Consensus 112 -~~~qa~al~~~~~~~~~~~c~~~g~--------qdTl~~~-~~--~~~~~~c~I~G~-vDfi~G~~ 165 (181)
....|..+. .+.++-+.+|+|... .|.+..- .+ .--+++|++.+. --.++|..
T Consensus 72 ~~~~Dai~i~-~~~nVWIDH~sfs~~~~~~~~~~~Dg~idi~~~s~~vTiS~n~f~~~~k~~l~G~~ 137 (200)
T PF00544_consen 72 SSDGDAISID-NSSNVWIDHCSFSWGNFECNSDSSDGLIDIKKGSDNVTISNNIFDNHNKTMLIGSS 137 (200)
T ss_dssp ECS--SEEEE-STEEEEEES-EEEETTS-GGGSSSSSSEEEESSTEEEEEES-EEEEEEETCEESSC
T ss_pred ccCCCeEEEE-ecccEEEeccEEeccccccccccCCceEEEEeCCceEEEEchhccccccccccCCC
Confidence 133444444 667999999999988 8877653 33 235788888874 33566765
No 62
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=96.30 E-value=0.035 Score=51.21 Aligned_cols=84 Identities=17% Similarity=0.252 Sum_probs=66.4
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEec------cee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITG------TVD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G------~vD 159 (181)
.....|.+.++...++++.|.- .| -.|+.++.|..|++|.|.|.=|=+| +.+..+|++|.|.- ...
T Consensus 365 ~QAVAlrv~~D~~~f~~c~~~G------~Q-DTLy~~~~Rqyy~~C~I~GtVDFIF-G~a~avf~~C~i~~~~~~~~~~~ 436 (572)
T PLN02990 365 HQAVALRVSADYAVFYNCQIDG------YQ-DTLYVHSHRQFFRDCTVSGTVDFIF-GDAKVVLQNCNIVVRKPMKGQSC 436 (572)
T ss_pred CceEEEEEcCCcEEEEeeeEec------cc-chhccCCCcEEEEeeEEecccceEc-cCceEEEEccEEEEecCCCCCce
Confidence 3567788899999999999992 33 3677888999999999999999888 44788999999963 345
Q ss_pred eEEccc--------cEEEEeeEEEec
Q 035494 160 FIFGDA--------ATIFQNCQIMVR 177 (181)
Q Consensus 160 fi~G~~--------~~~f~~c~i~~~ 177 (181)
+|.-.+ .-+|++|+|...
T Consensus 437 ~iTAq~r~~~~~~~G~vf~~C~it~~ 462 (572)
T PLN02990 437 MITAQGRSDVRESTGLVLQNCHITGE 462 (572)
T ss_pred EEEeCCCCCCCCCceEEEEeeEEecC
Confidence 776432 368999998764
No 63
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=96.28 E-value=0.043 Score=49.86 Aligned_cols=83 Identities=11% Similarity=0.250 Sum_probs=64.8
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEe------cceee
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLIT------GTVDF 160 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~------G~vDf 160 (181)
....|.+.++...++++.|. +.| -.|+.+..|..|++|.|.|.=|=+| +.+..+|++|.|. |...+
T Consensus 289 QAvAl~v~~D~~~fy~c~~~------G~Q-DTLy~~~~rqyy~~C~I~G~vDFIF-G~a~avf~~C~i~~~~~~~~~~~~ 360 (497)
T PLN02698 289 QAIALSITSDHSVLYRCSIA------GYQ-DTLYAAALRQFYRECDIYGTIDFIF-GNAAAVFQNCYLFLRRPHGKSYNV 360 (497)
T ss_pred ceEEEEecCCcEEEEcceee------ccc-chheeCCCcEEEEeeEEEeccceEe-cccceeecccEEEEecCCCCCceE
Confidence 35688889999999999999 234 3677888899999999999999888 4477899999996 33346
Q ss_pred EEccc--------cEEEEeeEEEec
Q 035494 161 IFGDA--------ATIFQNCQIMVR 177 (181)
Q Consensus 161 i~G~~--------~~~f~~c~i~~~ 177 (181)
|.-.+ .-+|++|.|...
T Consensus 361 iTAq~r~~~~~~~G~vf~~c~i~~~ 385 (497)
T PLN02698 361 ILANGRSDPGQNTGFSLQSCRIRTS 385 (497)
T ss_pred EEecCCCCCCCCceEEEEeeEEecC
Confidence 65422 468999998754
No 64
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=96.20 E-value=0.037 Score=50.70 Aligned_cols=84 Identities=13% Similarity=0.237 Sum_probs=67.2
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc------ee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT------VD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~------vD 159 (181)
...-.|.+.++...++++.|.. .| -.|+.++.|..|++|.|.|.=|-+|-. +..+|++|.|.-. ..
T Consensus 330 ~QAVAlrv~~Dr~~f~~c~~~G------~Q-DTLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avf~~C~i~~~~~~~~~~~ 401 (539)
T PLN02995 330 GQAVALRSSSDLSIFYKCSIEG------YQ-DTLMVHSQRQFYRECYIYGTVDFIFGN-AAAVFQNCIILPRRPLKGQAN 401 (539)
T ss_pred CceEEEEEcCCceeEEcceEec------cc-chhccCCCceEEEeeEEeeccceEecc-cceEEeccEEEEecCCCCCcc
Confidence 3567788889999999999993 34 367788899999999999999988865 7889999999743 35
Q ss_pred eEEccc--------cEEEEeeEEEec
Q 035494 160 FIFGDA--------ATIFQNCQIMVR 177 (181)
Q Consensus 160 fi~G~~--------~~~f~~c~i~~~ 177 (181)
+|--.+ .-+|++|+|...
T Consensus 402 ~iTA~~r~~~~~~~G~vf~~c~i~~~ 427 (539)
T PLN02995 402 VITAQGRADPFQNTGISIHNSRILPA 427 (539)
T ss_pred eEecCCCCCCCCCceEEEEeeEEecC
Confidence 676543 258999999763
No 65
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=96.18 E-value=0.042 Score=50.85 Aligned_cols=83 Identities=16% Similarity=0.220 Sum_probs=64.3
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEec------cee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITG------TVD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G------~vD 159 (181)
..+..|.+.++...++++.|.- .| -.|+.++.|.-|++|.|.|.=|=+| +.+..+|.+|.|.- ..-
T Consensus 380 ~QAvAlrv~~D~~~fy~C~~~g------~Q-DTLy~~~~rq~y~~c~I~GtvDFIF-G~a~avfq~c~i~~r~~~~~~~~ 451 (587)
T PLN02313 380 HQAVALRVGSDFSAFYQCDMFA------YQ-DTLYVHSNRQFFVKCHITGTVDFIF-GNAAAVLQDCDINARRPNSGQKN 451 (587)
T ss_pred CceEEEEecCCcEEEEeeeEec------cc-chhccCCCcEEEEeeEEeeccceec-cceeEEEEccEEEEecCCCCCcc
Confidence 3567888999999999999992 33 3678888999999999999999888 44778999999973 233
Q ss_pred eEEcc--------ccEEEEeeEEEe
Q 035494 160 FIFGD--------AATIFQNCQIMV 176 (181)
Q Consensus 160 fi~G~--------~~~~f~~c~i~~ 176 (181)
+|--. ..-+|++|+|..
T Consensus 452 ~iTAqgr~~~~~~tG~v~~~c~i~~ 476 (587)
T PLN02313 452 MVTAQGRSDPNQNTGIVIQNCRIGG 476 (587)
T ss_pred eEEecCCCCCCCCceEEEEecEEec
Confidence 45432 246899999864
No 66
>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A.
Probab=96.12 E-value=0.028 Score=41.48 Aligned_cols=83 Identities=11% Similarity=0.093 Sum_probs=46.5
Q ss_pred eEEEEec-CCEEEEEeEEEeCCCCCCCceEEEEEc-CCceEEEeeEEeeeeeeEEecc-cceeeeccEEeccee--eEE-
Q 035494 89 ATFVAIG-EGLFAKSMGFRNIAGPENGEAVAARVQ-SDRATFHNCRFEGYKNAVWAQT-HRQFYRSCLITGTVD--FIF- 162 (181)
Q Consensus 89 a~~~v~~-~~~~~~nlti~N~~~~~~~qa~al~~~-~~~~~~~~c~~~g~qdTl~~~~-~~~~~~~c~I~G~vD--fi~- 162 (181)
..+.+.. ..+++++.+|.+. ..+|++. +.+..+.+|.|.+....+++.. ....+++|.|....+ +.+
T Consensus 24 ~gi~~~~~~~~~i~n~~i~~~-------~~gi~~~~~~~~~i~~~~~~~~~~~i~~~~~~~~~i~~~~i~~~~~~gi~~~ 96 (158)
T PF13229_consen 24 DGIHVSGSSNITIENCTISNG-------GYGIYVSGGSNVTISNNTISDNGSGIYVSGSSNITIENNRIENNGDYGIYIS 96 (158)
T ss_dssp ECEEE-SSCESEEES-EEESS-------TTSEEEECCES-EEES-EEES-SEEEECCS-CS-EEES-EEECSSS-SCE-T
T ss_pred eEEEEEcCCCeEEECeEEECC-------CcEEEEecCCCeEEECeEEEEccceEEEEecCCceecCcEEEcCCCccEEEe
Confidence 3444443 4457778887761 1245553 3678888888887776677664 345788888887665 323
Q ss_pred c-cccEEEEeeEEEecC
Q 035494 163 G-DAATIFQNCQIMVRK 178 (181)
Q Consensus 163 G-~~~~~f~~c~i~~~~ 178 (181)
. .....|++|+++..+
T Consensus 97 ~~~~~~~i~~n~~~~~~ 113 (158)
T PF13229_consen 97 NSSSNVTIENNTIHNNG 113 (158)
T ss_dssp CEECS-EEES-EEECCT
T ss_pred ccCCCEEEEeEEEEeCc
Confidence 3 446888888887644
No 67
>PLN02682 pectinesterase family protein
Probab=96.08 E-value=0.076 Score=46.46 Aligned_cols=82 Identities=15% Similarity=0.274 Sum_probs=61.1
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEec---ceeeEEc
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITG---TVDFIFG 163 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G---~vDfi~G 163 (181)
....|.+.++...++++.|.- .| -.|+...+|..|++|.|.|.=|=+|-. +..+|++|.|.- ...+|--
T Consensus 187 QAVAL~v~gDr~~fy~C~f~G------~Q-DTLy~~~gRqyf~~C~IeG~VDFIFG~-g~a~Fe~C~I~s~~~~~G~ITA 258 (369)
T PLN02682 187 QAVALRISADTAAFYGCKFLG------AQ-DTLYDHLGRHYFKDCYIEGSVDFIFGN-GLSLYEGCHLHAIARNFGALTA 258 (369)
T ss_pred cEEEEEecCCcEEEEcceEec------cc-cceEECCCCEEEEeeEEcccccEEecC-ceEEEEccEEEEecCCCeEEec
Confidence 456778889999999999993 33 367778889999999999998888765 677888888863 2345553
Q ss_pred cc--------cEEEEeeEEEe
Q 035494 164 DA--------ATIFQNCQIMV 176 (181)
Q Consensus 164 ~~--------~~~f~~c~i~~ 176 (181)
.+ .=+|.+|+|..
T Consensus 259 ~~r~~~~~~~GfvF~~C~itg 279 (369)
T PLN02682 259 QKRQSVLEDTGFSFVNCKVTG 279 (369)
T ss_pred CCCCCCCCCceEEEEeeEecC
Confidence 21 35788888753
No 68
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=96.08 E-value=0.09 Score=47.76 Aligned_cols=83 Identities=16% Similarity=0.246 Sum_probs=66.2
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEec------ceee
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITG------TVDF 160 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G------~vDf 160 (181)
..-.|.+.++...++++.|. +.| -.|+..+.|.-|++|.|.|.=|=+| +.+..+|.+|.|.- ...+
T Consensus 303 QAVALrv~~Dra~Fy~C~f~------GyQ-DTLy~~~~RqyyrdC~I~GtVDFIF-G~a~avFq~C~I~sr~~~~~~~~~ 374 (509)
T PLN02488 303 PAVALRVSGDMSVIYRCRIE------GYQ-DALYPHRDRQFYRECFITGTVDFIC-GNAAAVFQFCQIVARQPMMGQSNV 374 (509)
T ss_pred ceEEEEecCCcEEEEcceee------ccC-cceeeCCCCEEEEeeEEeeccceEe-cceEEEEEccEEEEecCCCCCCEE
Confidence 46678888999999999999 234 3678889999999999999999888 55888999999973 3346
Q ss_pred EEccc--------cEEEEeeEEEec
Q 035494 161 IFGDA--------ATIFQNCQIMVR 177 (181)
Q Consensus 161 i~G~~--------~~~f~~c~i~~~ 177 (181)
|--.+ .-+|++|+|...
T Consensus 375 ITAq~R~~~~~~tGfvf~~C~it~~ 399 (509)
T PLN02488 375 ITAQSRESKDDNSGFSIQKCNITAS 399 (509)
T ss_pred EEeCCCCCCCCCcEEEEEeeEEecC
Confidence 66543 368999998764
No 69
>PLN02304 probable pectinesterase
Probab=96.07 E-value=0.19 Score=44.12 Aligned_cols=82 Identities=18% Similarity=0.333 Sum_probs=61.7
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc---------
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT--------- 157 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~--------- 157 (181)
.+-.|.+.++...++++.|. +.| -.|+...+|..|++|.|.|.=|-++-. +..+|++|.|.-.
T Consensus 186 QAVAL~v~gDra~fy~C~f~------G~Q-DTLy~~~gR~Yf~~CyIeG~VDFIFG~-g~A~Fe~C~I~s~~~~~~~g~~ 257 (379)
T PLN02304 186 QAVAIRIAGDQAAFWGCGFF------GAQ-DTLHDDRGRHYFKDCYIQGSIDFIFGD-ARSLYENCRLISMANPVPPGSK 257 (379)
T ss_pred cEEEEEecCCcEEEEeceEe------ccc-ceeEeCCCCEEEEeeEEcccccEEecc-ceEEEEccEEEEecCCcccccc
Confidence 45677888999999999998 334 357778889999999999998888766 7779999988732
Q ss_pred --eeeEEccc--------cEEEEeeEEEe
Q 035494 158 --VDFIFGDA--------ATIFQNCQIMV 176 (181)
Q Consensus 158 --vDfi~G~~--------~~~f~~c~i~~ 176 (181)
..+|.-.+ .=+|.+|.|..
T Consensus 258 ~~~G~ITA~~Rt~~~~~~GfvF~~C~itg 286 (379)
T PLN02304 258 SINGAVTAHGRTSKDENTGFSFVNCTIGG 286 (379)
T ss_pred cCceEEEecCCCCCCCCceEEEECCEEcc
Confidence 23565322 35788888753
No 70
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=96.00 E-value=0.063 Score=50.36 Aligned_cols=83 Identities=13% Similarity=0.266 Sum_probs=65.5
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc------eee
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT------VDF 160 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~------vDf 160 (181)
..-.|.+.++...++++.|.. .| -.|+.++.|..|++|.|.|.=|=+| +.+..+|++|.|.-. ..+
T Consensus 356 QAVAlrv~~Dra~fy~C~f~G------~Q-DTLy~~~~Rqyy~~C~I~GtVDFIF-G~a~avfq~C~I~~r~~~~~~~~~ 427 (670)
T PLN02217 356 QAVAIRVLSDESIFYNCKFDG------YQ-DTLYAHSHRQFYRDCTISGTIDFLF-GDAAAVFQNCTLLVRKPLLNQACP 427 (670)
T ss_pred ceEEEEecCCcEEEEcceeee------cc-chhccCCCcEEEEeCEEEEeccEEe-cCceEEEEccEEEEccCCCCCcee
Confidence 456788899999999999982 33 3677888999999999999999888 447889999999742 345
Q ss_pred EEccc--------cEEEEeeEEEec
Q 035494 161 IFGDA--------ATIFQNCQIMVR 177 (181)
Q Consensus 161 i~G~~--------~~~f~~c~i~~~ 177 (181)
|--.+ .-+|++|+|...
T Consensus 428 ITAqgr~~~~~~tGfvf~~C~i~~~ 452 (670)
T PLN02217 428 ITAHGRKDPRESTGFVLQGCTIVGE 452 (670)
T ss_pred EecCCCCCCCCCceEEEEeeEEecC
Confidence 55332 358999999764
No 71
>smart00722 CASH Domain present in carbohydrate binding proteins and sugar hydrolses.
Probab=95.99 E-value=0.38 Score=34.88 Aligned_cols=100 Identities=11% Similarity=0.080 Sum_probs=66.3
Q ss_pred CcEEEeeEEEecc-ccCEEEEecCCCceEEE-eeeecCCCCcccceeEEEEecCCEEEEEeEEEe---CCCCCCCceEEE
Q 035494 45 TGIYEESVTVSKR-MVNLTIIGEGSQKSIIV-GRKSVADGVNIYDAATFVAIGEGLFAKSMGFRN---IAGPENGEAVAA 119 (181)
Q Consensus 45 ~G~Y~E~v~I~~~-~~~vtl~G~~~~~~~I~-~~~~~~~g~~~~~~a~~~v~~~~~~~~nlti~N---~~~~~~~qa~al 119 (181)
.|.|.+.+..... +.++++.+++ .++|+ +. .....+.+.+++++++++++.+ +.........++
T Consensus 3 ~G~~~~~~~~~~~~~~~~~~~~~~--~~vi~~~~---------~~~~~~~i~~~~~~~~G~~~~~~~~~G~~~~~~~~~~ 71 (146)
T smart00722 3 NGIVLELLRIAVHYMGNVTNGGSG--GAVITDGS---------GRGSNITINSNDVRVDGITIGGSTVTGIYVSASGDGV 71 (146)
T ss_pred cCCeEEeccccccccCCeEeeCcC--CEEEEecC---------CcEEEEEEeCCCCEEECeEEEeEEeeCcccccCCceE
Confidence 4555554443211 1478888876 57777 33 2357888889999999999998 333333333444
Q ss_pred EEcCCceEEEeeEEeee----eeeEEecccce-eeeccEEe
Q 035494 120 RVQSDRATFHNCRFEGY----KNAVWAQTHRQ-FYRSCLIT 155 (181)
Q Consensus 120 ~~~~~~~~~~~c~~~g~----qdTl~~~~~~~-~~~~c~I~ 155 (181)
.....+..+.++.+.+. ..++++..... .|.+..|.
T Consensus 72 ~~~~~~~~i~~N~~~~~~~~~~~Gi~~~~~~~~~~~~N~i~ 112 (146)
T smart00722 72 IQNTGKNLIIDNVTINGTEGSGAGIVVTAGSEGLFIGNRII 112 (146)
T ss_pred ecCccccEEEcceecCCCccceEEEEEECCccceEecCeEE
Confidence 45667889999999986 89999976432 35555655
No 72
>PLN02916 pectinesterase family protein
Probab=95.97 E-value=0.086 Score=47.90 Aligned_cols=84 Identities=13% Similarity=0.190 Sum_probs=66.5
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc------ee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT------VD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~------vD 159 (181)
...-.|.+.++...++++.|. +.| -.|+..+.|..|++|.|.|.=|=+|-. +..+|++|.|.-. -.
T Consensus 295 ~QAVALrv~~D~a~fy~C~f~------G~Q-DTLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avFq~C~I~~~~~~~~~~g 366 (502)
T PLN02916 295 HQAVALRVSSDLSVFYRCSFK------GYQ-DTLFVHSLRQFYRDCHIYGTIDFIFGD-AAVVFQNCDIFVRRPMDHQGN 366 (502)
T ss_pred CceEEEEEcCCcEEEEeeeEe------ccC-ceeEeCCCCEEEEecEEecccceeccC-ceEEEecCEEEEecCCCCCcc
Confidence 356678889999999999999 344 478888999999999999999988765 7889999999642 35
Q ss_pred eEEccc--------cEEEEeeEEEec
Q 035494 160 FIFGDA--------ATIFQNCQIMVR 177 (181)
Q Consensus 160 fi~G~~--------~~~f~~c~i~~~ 177 (181)
+|.-.+ .-+|++|+|...
T Consensus 367 ~ITAq~r~~~~~~tGfvf~~C~it~~ 392 (502)
T PLN02916 367 MITAQGRDDPHENTGISIQHSRVRAS 392 (502)
T ss_pred eEEecCCCCCCCCcEEEEEeeEEecC
Confidence 676432 368999998753
No 73
>PLN02197 pectinesterase
Probab=95.91 E-value=0.07 Score=49.39 Aligned_cols=84 Identities=17% Similarity=0.255 Sum_probs=66.6
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEec------cee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITG------TVD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G------~vD 159 (181)
...-.|.+.++...++++.|.- .| -.|+.+..|..|++|.|.|.=|=+|-. +..+|.+|.|.- .--
T Consensus 382 ~QAVAlrv~~D~~~fy~C~f~G------yQ-DTLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avfq~C~i~~r~~~~~~~~ 453 (588)
T PLN02197 382 HQAVAIRVNGDRAVIFNCRFDG------YQ-DTLYVNNGRQFYRNIVVSGTVDFIFGK-SATVIQNSLIVVRKGSKGQYN 453 (588)
T ss_pred CceEEEEecCCcEEEEEeEEEe------cC-cceEecCCCEEEEeeEEEecccccccc-eeeeeecCEEEEecCCCCCce
Confidence 3567888899999999999993 34 378888999999999999999988766 568999999873 234
Q ss_pred eEEcccc---------EEEEeeEEEec
Q 035494 160 FIFGDAA---------TIFQNCQIMVR 177 (181)
Q Consensus 160 fi~G~~~---------~~f~~c~i~~~ 177 (181)
+|.-.++ -+|++|+|...
T Consensus 454 ~iTAqgr~~~~~~~tG~vf~~C~it~~ 480 (588)
T PLN02197 454 TVTADGNEKGLAMKIGIVLQNCRIVPD 480 (588)
T ss_pred eEECCCCCCCCCCCcEEEEEccEEecC
Confidence 6665542 48999998753
No 74
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=95.90 E-value=0.085 Score=48.21 Aligned_cols=83 Identities=12% Similarity=0.244 Sum_probs=64.2
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc-----eee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT-----VDF 160 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~-----vDf 160 (181)
.....|.+.++...++++.|. +.| -.|+.++.|..|++|.|.|.=|=++-. +..+|++|.|.-. ..+
T Consensus 331 ~QAVALrv~gDr~~fy~C~f~------GyQ-DTLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avFq~C~I~~~~~~~~~g~ 402 (529)
T PLN02170 331 EQAVALRVGSDKSVVYRCSVE------GYQ-DSLYTHSKRQFYRETDITGTVDFIFGN-SAVVFQSCNIAARKPSGDRNY 402 (529)
T ss_pred CceEEEEecCCcEEEEeeeEe------ccC-CcceeCCCCEEEEeeEEccccceeccc-ceEEEeccEEEEecCCCCceE
Confidence 356788899999999999998 234 367788889999999999998888765 7789999999743 356
Q ss_pred EEccc--------cEEEEeeEEEe
Q 035494 161 IFGDA--------ATIFQNCQIMV 176 (181)
Q Consensus 161 i~G~~--------~~~f~~c~i~~ 176 (181)
|.-.+ .=+|++|+|..
T Consensus 403 ITAq~R~~~~~~~Gfvf~~C~it~ 426 (529)
T PLN02170 403 VTAQGRSDPNQNTGISIHNCRITA 426 (529)
T ss_pred EEecCCCCCCCCceEEEEeeEEec
Confidence 65432 35789998864
No 75
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=95.83 E-value=0.095 Score=48.63 Aligned_cols=84 Identities=15% Similarity=0.298 Sum_probs=64.0
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc------ee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT------VD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~------vD 159 (181)
...-.|.+.++...++++.|.- .| -.|+.+..|..|++|.|.|.=|=+| +.+..+|++|.|.-. -.
T Consensus 390 ~QAVAl~v~~Dr~~f~~c~~~G------~Q-DTLy~~~~Rqyy~~C~I~GtVDFIF-G~a~avf~~C~i~~~~~~~~~~~ 461 (596)
T PLN02745 390 HQAVAIRVQSDRSIFLNCRFEG------YQ-DTLYAQTHRQFYRSCVITGTIDFIF-GDAAAIFQNCLIFVRKPLPNQQN 461 (596)
T ss_pred CceEEEEEcCCcEEEEeeEEee------cc-cccccCCCcEEEEeeEEEeeccEEe-cceeEEEEecEEEEecCCCCCCc
Confidence 3566788899999999999993 33 3677788899999999999999555 447889999999743 24
Q ss_pred eEEccc--------cEEEEeeEEEec
Q 035494 160 FIFGDA--------ATIFQNCQIMVR 177 (181)
Q Consensus 160 fi~G~~--------~~~f~~c~i~~~ 177 (181)
+|--.+ .-+|++|+|...
T Consensus 462 ~iTAq~r~~~~~~~Gfvf~~c~i~~~ 487 (596)
T PLN02745 462 TVTAQGRVDKFETTGIVLQNCRIAPD 487 (596)
T ss_pred eEEecCCCCCCCCceEEEEeeEEecC
Confidence 665432 358999998753
No 76
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=95.81 E-value=0.081 Score=48.81 Aligned_cols=82 Identities=17% Similarity=0.244 Sum_probs=63.9
Q ss_pred ceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEec------ceee
Q 035494 87 DAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITG------TVDF 160 (181)
Q Consensus 87 ~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G------~vDf 160 (181)
....|.+.++...++++.|. +.| -.|+..+.|..|++|.|.|.=|-+|-. +..+|++|.|.- ..-+
T Consensus 359 QAVAlrv~~D~~~fy~C~~~------G~Q-DTLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avfq~C~i~~~~~~~~~~~~ 430 (566)
T PLN02713 359 QAVALRSGADLSTFYSCSFE------AYQ-DTLYTHSLRQFYRECDIYGTVDFIFGN-AAVVFQNCNLYPRLPMQGQFNT 430 (566)
T ss_pred ceEEEEecCCcEEEEeeeec------cCC-cceEECCCCEEEEeeEEecccceeccc-ceEEEeccEEEEecCCCCCcce
Confidence 45678888999999999998 334 378888899999999999999988765 778999999953 2345
Q ss_pred EEccc--------cEEEEeeEEEe
Q 035494 161 IFGDA--------ATIFQNCQIMV 176 (181)
Q Consensus 161 i~G~~--------~~~f~~c~i~~ 176 (181)
|--.+ .-+|++|+|..
T Consensus 431 iTAq~r~~~~~~~G~vf~~c~i~~ 454 (566)
T PLN02713 431 ITAQGRTDPNQNTGTSIQNCTIKA 454 (566)
T ss_pred eeecCCCCCCCCCEEEEEcCEEec
Confidence 54332 36899999875
No 77
>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein. Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.
Probab=95.77 E-value=0.41 Score=40.90 Aligned_cols=66 Identities=12% Similarity=0.236 Sum_probs=44.3
Q ss_pred EecCCEEEEEeEEEeCCCCC-CCceEEEEE-cCCceEEEeeEEeeeee-eEEecccc-eeeeccEEecce
Q 035494 93 AIGEGLFAKSMGFRNIAGPE-NGEAVAARV-QSDRATFHNCRFEGYKN-AVWAQTHR-QFYRSCLITGTV 158 (181)
Q Consensus 93 v~~~~~~~~nlti~N~~~~~-~~qa~al~~-~~~~~~~~~c~~~g~qd-Tl~~~~~~-~~~~~c~I~G~v 158 (181)
..+++++++++++....... .....+|+. .+.++.+++|.+.+..| .+|++.++ ..|++|+++.+.
T Consensus 83 ~~s~~i~I~n~~i~~~~~~~~~~~~~GI~~~~s~~v~I~~n~i~g~~d~GIyv~~s~~~~v~nN~~~~n~ 152 (314)
T TIGR03805 83 KGSDGIIIRRLRVEWTGGPKSSNGAYGIYPVESTNVLVEDSYVRGASDAGIYVGQSQNIVVRNNVAEENV 152 (314)
T ss_pred eCCCCEEEEeeEEEeccCccccCCcceEEEeccCCEEEECCEEECCCcccEEECCCCCeEEECCEEccCc
Confidence 34678899999887543211 123345665 67888888888888776 68886543 367777777654
No 78
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=95.75 E-value=0.1 Score=47.92 Aligned_cols=84 Identities=11% Similarity=0.225 Sum_probs=64.9
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc------ee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT------VD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~------vD 159 (181)
.....|.+.++...++++.|.- .| -.|+.++.|..|++|.|.|.=|=+|-. +..+|++|.|.=. -.
T Consensus 341 ~QAVAlrv~~D~~~fy~C~~~G------~Q-DTLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avfq~c~i~~~~~~~~~~~ 412 (548)
T PLN02301 341 HQAVALRVSADQAVINRCRIDA------YQ-DTLYAHSLRQFYRDSYITGTVDFIFGN-AAVVFQNCKIVARKPMAGQKN 412 (548)
T ss_pred CceEEEEecCCcEEEEeeeeee------cc-ccceecCCcEEEEeeEEEeccceeccc-ceeEEeccEEEEecCCCCCCc
Confidence 3567788899999999999993 34 367888899999999999999888765 7789999999742 23
Q ss_pred eEEccc--------cEEEEeeEEEec
Q 035494 160 FIFGDA--------ATIFQNCQIMVR 177 (181)
Q Consensus 160 fi~G~~--------~~~f~~c~i~~~ 177 (181)
+|--.+ .-+|++|.|...
T Consensus 413 ~iTAqgr~~~~~~tG~vf~~c~i~~~ 438 (548)
T PLN02301 413 MVTAQGRTDPNQNTGISIQKCDIIAS 438 (548)
T ss_pred eEEecCCCCCCCCCEEEEEeeEEecC
Confidence 555432 468999998754
No 79
>PLN02314 pectinesterase
Probab=95.70 E-value=0.1 Score=48.31 Aligned_cols=84 Identities=15% Similarity=0.258 Sum_probs=63.7
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc------ee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT------VD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~------vD 159 (181)
.....|.+.++...++++.|.- .| -.|+.++.|..|++|.|.|.=|=+|-. +..+|.+|.|.=. ..
T Consensus 383 ~QAvAlrv~~D~~~f~~c~~~G------~Q-DTLy~~~~rq~y~~C~I~GtvDFIFG~-a~avf~~c~i~~~~~~~~~~~ 454 (586)
T PLN02314 383 HQAVAFRSGSDMSVFYQCSFDA------FQ-DTLYAHSNRQFYRDCDITGTIDFIFGN-AAVVFQNCNIQPRQPLPNQFN 454 (586)
T ss_pred CceEEEEecCCcEEEEeeEEEe------cc-chheeCCCCEEEEeeEEEeccceeccC-ceeeeeccEEEEecCCCCCCc
Confidence 3466888899999999999993 33 367888899999999999998888765 7789999998632 24
Q ss_pred eEEccc--------cEEEEeeEEEec
Q 035494 160 FIFGDA--------ATIFQNCQIMVR 177 (181)
Q Consensus 160 fi~G~~--------~~~f~~c~i~~~ 177 (181)
+|--.+ .-+|++|+|..-
T Consensus 455 ~iTA~~r~~~~~~~G~vf~~c~i~~~ 480 (586)
T PLN02314 455 TITAQGKKDPNQNTGISIQRCTISAF 480 (586)
T ss_pred eEecCCCCCCCCCCEEEEEeeEEecC
Confidence 555432 257889988653
No 80
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=95.67 E-value=0.1 Score=47.96 Aligned_cols=84 Identities=15% Similarity=0.254 Sum_probs=65.5
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEec------cee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITG------TVD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G------~vD 159 (181)
.....|.+.++...++++.|.. .| -.|+.++.|..+++|.|.|.=|-++-. +..+|++|.|.- .-.
T Consensus 335 ~QAVAl~v~~D~~~fy~c~~~G------~Q-DTLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avfq~c~i~~~~~~~~~~~ 406 (541)
T PLN02416 335 HQAVALRVNADLVALYRCTING------YQ-DTLYVHSFRQFYRECDIYGTIDYIFGN-AAVVFQACNIVSKMPMPGQFT 406 (541)
T ss_pred CceEEEEEcCccEEEEcceEec------cc-chhccCCCceEEEeeEEeeccceeecc-ceEEEeccEEEEecCCCCCce
Confidence 3567888899999999999983 34 367788899999999999999988766 778999999964 235
Q ss_pred eEEccc--------cEEEEeeEEEec
Q 035494 160 FIFGDA--------ATIFQNCQIMVR 177 (181)
Q Consensus 160 fi~G~~--------~~~f~~c~i~~~ 177 (181)
+|.-.+ .-+|++|+|...
T Consensus 407 ~iTA~~r~~~~~~~G~vf~~c~i~~~ 432 (541)
T PLN02416 407 VITAQSRDTPDEDTGISIQNCSILAT 432 (541)
T ss_pred EEECCCCCCCCCCCEEEEEeeEEecC
Confidence 665432 368999998643
No 81
>PLN02155 polygalacturonase
Probab=95.63 E-value=1 Score=39.84 Aligned_cols=71 Identities=10% Similarity=-0.012 Sum_probs=41.0
Q ss_pred ecCCEEEEEeEEEeCCCC--------------------C-CCceEEEEE-cCCceEEEeeEEeeeeeeEEecccc--eee
Q 035494 94 IGEGLFAKSMGFRNIAGP--------------------E-NGEAVAARV-QSDRATFHNCRFEGYKNAVWAQTHR--QFY 149 (181)
Q Consensus 94 ~~~~~~~~nlti~N~~~~--------------------~-~~qa~al~~-~~~~~~~~~c~~~g~qdTl~~~~~~--~~~ 149 (181)
...++++++|+++|+..- . ..-.-++.+ .+.++.+++|.|...-|-+-++.+. -.+
T Consensus 152 ~~~nv~i~gitl~nSp~w~i~~~~~~nv~i~~v~I~~p~~~~NtDGidi~~s~nV~I~~~~I~~gDDcIaik~gs~nI~I 231 (394)
T PLN02155 152 SAKDVIISGVKSMNSQVSHMTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQFSTGVTFTGSTVQTGDDCVAIGPGTRNFLI 231 (394)
T ss_pred EeeeEEEECeEEEcCCCeEEEEECeeeEEEEEEEEECCCCCCCCCccccccceeEEEEeeEEecCCceEEcCCCCceEEE
Confidence 456778888888876420 0 001124555 3567777777777777777776543 356
Q ss_pred eccEEecceeeEEcc
Q 035494 150 RSCLITGTVDFIFGD 164 (181)
Q Consensus 150 ~~c~I~G~vDfi~G~ 164 (181)
++|...+.-.+-+|.
T Consensus 232 ~n~~c~~GhGisIGS 246 (394)
T PLN02155 232 TKLACGPGHGVSIGS 246 (394)
T ss_pred EEEEEECCceEEecc
Confidence 666655433344554
No 82
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=95.62 E-value=0.11 Score=48.15 Aligned_cols=83 Identities=14% Similarity=0.241 Sum_probs=65.9
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEec------cee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITG------TVD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G------~vD 159 (181)
.....|.+.++...++++.|. +.| -.|+.+..|..|++|.|.|.=|=+|-. +..+|.+|.|.- ...
T Consensus 378 ~QAvAlrv~~D~~~fy~C~~~------G~Q-DTLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avfq~C~i~~~~~~~~~~~ 449 (587)
T PLN02484 378 HQAVALRVGADHAVVYRCNII------GYQ-DTLYVHSNRQFFRECDIYGTVDFIFGN-AAVVLQNCSIYARKPMAQQKN 449 (587)
T ss_pred CceEEEEecCCcEEEEeeeEe------ccC-cccccCCCcEEEEecEEEeccceeccc-ceeEEeccEEEEecCCCCCce
Confidence 356788899999999999999 334 377888899999999999999988765 778999999974 335
Q ss_pred eEEccc--------cEEEEeeEEEe
Q 035494 160 FIFGDA--------ATIFQNCQIMV 176 (181)
Q Consensus 160 fi~G~~--------~~~f~~c~i~~ 176 (181)
+|.-.+ .-+|++|.|..
T Consensus 450 ~ITAq~r~~~~~~~G~vf~~c~i~~ 474 (587)
T PLN02484 450 TITAQNRKDPNQNTGISIHACRILA 474 (587)
T ss_pred EEEecCCCCCCCCcEEEEEeeEEec
Confidence 666543 36899999865
No 83
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=95.57 E-value=0.1 Score=47.81 Aligned_cols=83 Identities=11% Similarity=0.117 Sum_probs=62.5
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc------ee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT------VD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~------vD 159 (181)
..+..|.+.++...++++.|. +.| -.|+.++.|..|++|.|.|.=|=+|-. +..+|.+|.|.-. -.
T Consensus 337 ~QAVAl~v~~D~~~fy~C~~~------G~Q-DTLy~~~~rqyy~~C~I~GtVDFIFG~-a~avfq~C~i~~r~~~~~~~~ 408 (537)
T PLN02506 337 HQAVALRVDSDQSAFYRCSME------GYQ-DTLYAHSLRQFYRECEIYGTIDFIFGN-GAAVLQNCKIYTRVPLPLQKV 408 (537)
T ss_pred CceEEEEecCCcEEEEcceee------ccc-ccceecCCceEEEeeEEecccceEccC-ceeEEeccEEEEccCCCCCCc
Confidence 456788889999999999998 334 367788889999999999988887765 6778889988743 23
Q ss_pred eEEccc--------cEEEEeeEEEe
Q 035494 160 FIFGDA--------ATIFQNCQIMV 176 (181)
Q Consensus 160 fi~G~~--------~~~f~~c~i~~ 176 (181)
+|--.+ .-+|++|.|..
T Consensus 409 ~iTA~~r~~~~~~~G~vf~~c~i~~ 433 (537)
T PLN02506 409 TITAQGRKSPHQSTGFSIQDSYVLA 433 (537)
T ss_pred eEEccCCCCCCCCcEEEEEcCEEcc
Confidence 555432 24788888764
No 84
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=95.52 E-value=0.14 Score=47.04 Aligned_cols=85 Identities=13% Similarity=0.190 Sum_probs=64.5
Q ss_pred ccceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEec------ce
Q 035494 85 IYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITG------TV 158 (181)
Q Consensus 85 ~~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G------~v 158 (181)
...+..|.+.++...++++.|.- .| -.|+.++.|..|++|.|.|.=|=+|-. +..+|.+|.|.- .-
T Consensus 330 ~~QAvAlrv~~D~~~f~~C~~~g------yQ-DTLy~~~~rq~y~~c~I~GtVDFIFG~-a~avfq~c~i~~r~~~~~~~ 401 (538)
T PLN03043 330 KHQAVALRNNADLSTFYRCSFEG------YQ-DTLYVHSLRQFYRECDIYGTVDFIFGN-AAAIFQNCNLYARKPMANQK 401 (538)
T ss_pred CCceEEEEEcCCcEEEEeeEEec------cC-cccccCCCcEEEEeeEEeeccceEeec-ceeeeeccEEEEecCCCCCC
Confidence 34566788899999999999993 33 367788889999999999998888765 778999999964 23
Q ss_pred eeEEccc--------cEEEEeeEEEec
Q 035494 159 DFIFGDA--------ATIFQNCQIMVR 177 (181)
Q Consensus 159 Dfi~G~~--------~~~f~~c~i~~~ 177 (181)
.+|--.+ .-+|++|+|...
T Consensus 402 ~~iTA~~r~~~~~~tG~~~~~c~i~~~ 428 (538)
T PLN03043 402 NAFTAQGRTDPNQNTGISIINCTIEAA 428 (538)
T ss_pred ceEEecCCCCCCCCceEEEEecEEecC
Confidence 4555432 357999998753
No 85
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=95.50 E-value=0.19 Score=45.98 Aligned_cols=83 Identities=13% Similarity=0.198 Sum_probs=65.3
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc------ee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT------VD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~------vD 159 (181)
...-.|.+.++...++++.|. +.| -.|+.+..|..|++|.|.|.=|=+|-. +..+|++|.|.-. -.
T Consensus 311 ~QAVAlrv~~D~~~fy~C~f~------G~Q-DTLy~~~~Rqyy~~C~I~GtVDFIFG~-a~avf~~C~i~~~~~~~~~~~ 382 (520)
T PLN02201 311 HQAVALRSDSDLSVFYRCAMR------GYQ-DTLYTHTMRQFYRECRITGTVDFIFGD-ATAVFQNCQILAKKGLPNQKN 382 (520)
T ss_pred CceEEEEEcCCcEEEEeeeee------ccC-CeeEeCCCCEEEEeeEEeecccEEecC-ceEEEEccEEEEecCCCCCCc
Confidence 356778889999999999999 334 378888999999999999999988765 7789999999742 24
Q ss_pred eEEccc--------cEEEEeeEEEe
Q 035494 160 FIFGDA--------ATIFQNCQIMV 176 (181)
Q Consensus 160 fi~G~~--------~~~f~~c~i~~ 176 (181)
+|--.+ .=+|++|+|..
T Consensus 383 ~iTAq~r~~~~~~~Gfvf~~C~it~ 407 (520)
T PLN02201 383 TITAQGRKDPNQPTGFSIQFSNISA 407 (520)
T ss_pred eEEecCCCCCCCCcEEEEEeeEEec
Confidence 565433 25799999864
No 86
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=95.48 E-value=0.15 Score=47.08 Aligned_cols=84 Identities=13% Similarity=0.229 Sum_probs=63.3
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEec------cee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITG------TVD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G------~vD 159 (181)
.....|.+.++...++++.|.- .| -.|+.++.|..|++|.|.|.=|=+|-. +..+|.+|.|.- .--
T Consensus 363 ~QAVAl~v~~D~~~fy~c~~~G------~Q-DTLy~~~~rq~y~~C~I~GtvDFIFG~-a~avfq~c~i~~~~~~~~~~~ 434 (565)
T PLN02468 363 HQAVALMSSADLSVFYRCTMDA------FQ-DTLYAHAQRQFYRECNIYGTVDFIFGN-SAVVFQNCNILPRRPMKGQQN 434 (565)
T ss_pred CceEEEEEcCCcEEEEEeEEEe------cc-chhccCCCceEEEeeEEecccceeecc-ceEEEeccEEEEecCCCCCCc
Confidence 3566788899999999999983 33 367778889999999999998888765 777999999963 223
Q ss_pred eEEccc--------cEEEEeeEEEec
Q 035494 160 FIFGDA--------ATIFQNCQIMVR 177 (181)
Q Consensus 160 fi~G~~--------~~~f~~c~i~~~ 177 (181)
+|--.+ .-+|++|+|...
T Consensus 435 ~iTA~~r~~~~~~~G~vf~~c~i~~~ 460 (565)
T PLN02468 435 TITAQGRTDPNQNTGISIQNCTILPL 460 (565)
T ss_pred eEEecCCCCCCCCceEEEEccEEecC
Confidence 555432 257899988754
No 87
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=94.99 E-value=0.26 Score=45.11 Aligned_cols=83 Identities=10% Similarity=0.153 Sum_probs=63.7
Q ss_pred cceeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCCceEEEeeEEeeeeeeEEecccceeeeccEEecc------ee
Q 035494 86 YDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT------VD 159 (181)
Q Consensus 86 ~~~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~------vD 159 (181)
.....|.+.++...++++.|.- .| -.|+.++.|..|++|.|.|.=|=+|-. +..+|++|.|.-. -.
T Consensus 323 ~QAVAlrv~~Dra~fy~C~f~G------~Q-DTLy~~~~Rqyy~~C~IeGtVDFIFG~-a~avFq~C~i~~~~~~~~~~~ 394 (530)
T PLN02933 323 HQAVALRSGSDHSAFYRCEFDG------YQ-DTLYVHSAKQFYRECDIYGTIDFIFGN-AAVVFQNCSLYARKPNPNHKI 394 (530)
T ss_pred CceEEEEEcCCcEEEEEeEEEe------cc-cccccCCCceEEEeeEEecccceeccC-ceEEEeccEEEEeccCCCCce
Confidence 3567788889999999999983 34 367788889999999999998887765 7789999999642 23
Q ss_pred eEEccc--------cEEEEeeEEEe
Q 035494 160 FIFGDA--------ATIFQNCQIMV 176 (181)
Q Consensus 160 fi~G~~--------~~~f~~c~i~~ 176 (181)
+|--.+ .-+|++|.|..
T Consensus 395 ~iTAq~r~~~~~~tGfvf~~C~it~ 419 (530)
T PLN02933 395 AFTAQSRNQSDQPTGISIISSRILA 419 (530)
T ss_pred EEEecCCCCCCCCceEEEEeeEEec
Confidence 444322 35799999875
No 88
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=94.79 E-value=0.96 Score=37.87 Aligned_cols=55 Identities=20% Similarity=0.369 Sum_probs=41.2
Q ss_pred cCCceEEEeeEEeeeeeeEEecccceeeeccEEecceeeEEccc--cEEEEeeEEEecCC
Q 035494 122 QSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDA--ATIFQNCQIMVRKP 179 (181)
Q Consensus 122 ~~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~vDfi~G~~--~~~f~~c~i~~~~~ 179 (181)
.+.++.|.||+|.|.|-=-|+.. .-.+||... +.|..|.+. .|-.......++.|
T Consensus 192 ~SkNltliNC~I~g~QpLCY~~~--L~l~nC~~~-~tdlaFEyS~v~A~I~~~I~SVKNP 248 (277)
T PF12541_consen 192 NSKNLTLINCTIEGTQPLCYCDN--LVLENCTMI-DTDLAFEYSNVDADIKGPIDSVKNP 248 (277)
T ss_pred EcCCeEEEEeEEeccCccEeecc--eEEeCcEee-cceeeeeeccccEEEEcceeeecCC
Confidence 57889999999999999989884 356899999 899888874 34444444444444
No 89
>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....
Probab=94.50 E-value=0.21 Score=42.75 Aligned_cols=58 Identities=19% Similarity=0.448 Sum_probs=36.9
Q ss_pred EEEEcC-CceEEEeeEEeeeeeeEEecccc--eeeeccEEecceeeEEcc---c-------cEEEEeeEEE
Q 035494 118 AARVQS-DRATFHNCRFEGYKNAVWAQTHR--QFYRSCLITGTVDFIFGD---A-------ATIFQNCQIM 175 (181)
Q Consensus 118 al~~~~-~~~~~~~c~~~g~qdTl~~~~~~--~~~~~c~I~G~vDfi~G~---~-------~~~f~~c~i~ 175 (181)
++.+.+ .++.+++|.+...-|.+.+..++ -.+++|+..+.--+-+|. + ..+|++|++.
T Consensus 144 Gid~~~s~nv~I~n~~i~~gDD~Iaiks~~~ni~v~n~~~~~ghGisiGS~~~~~~~~~i~nV~~~n~~i~ 214 (326)
T PF00295_consen 144 GIDIDSSKNVTIENCFIDNGDDCIAIKSGSGNILVENCTCSGGHGISIGSEGSGGSQNDIRNVTFENCTII 214 (326)
T ss_dssp SEEEESEEEEEEESEEEESSSESEEESSEECEEEEESEEEESSSEEEEEEESSSSE--EEEEEEEEEEEEE
T ss_pred eEEEEeeeEEEEEEeecccccCcccccccccceEEEeEEEeccccceeeeccCCccccEEEeEEEEEEEee
Confidence 455533 67788888888777777777655 367778777543455552 2 3566666654
No 90
>PLN02188 polygalacturonase/glycoside hydrolase family protein
Probab=94.48 E-value=0.61 Score=41.37 Aligned_cols=44 Identities=16% Similarity=0.268 Sum_probs=30.4
Q ss_pred CceEEEEEcCCceEEEeeEEeeeeeeEEecc----------cceeeeccEEecce
Q 035494 114 GEAVAARVQSDRATFHNCRFEGYKNAVWAQT----------HRQFYRSCLITGTV 158 (181)
Q Consensus 114 ~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~----------~~~~~~~c~I~G~v 158 (181)
..++|+....+++.+++|.... .-.+-+++ ..-+++||.+.+..
T Consensus 227 DDcIaiksg~~nI~I~n~~c~~-ghGisiGSlG~~~~~~~V~nV~v~n~~~~~t~ 280 (404)
T PLN02188 227 DDCISIGQGNSQVTITRIRCGP-GHGISVGSLGRYPNEGDVTGLVVRDCTFTGTT 280 (404)
T ss_pred CcEEEEccCCccEEEEEEEEcC-CCcEEeCCCCCCCcCCcEEEEEEEeeEEECCC
Confidence 4456666677899999998853 34566644 12369999999853
No 91
>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A.
Probab=94.07 E-value=0.34 Score=35.48 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=35.2
Q ss_pred CCEEEEEeEEEeCCCCCCCceEEEEE-cCCceEEEeeEEeeeee-eEEecc-c-ceeeeccEEeccee---eEEccc--c
Q 035494 96 EGLFAKSMGFRNIAGPENGEAVAARV-QSDRATFHNCRFEGYKN-AVWAQT-H-RQFYRSCLITGTVD---FIFGDA--A 166 (181)
Q Consensus 96 ~~~~~~nlti~N~~~~~~~qa~al~~-~~~~~~~~~c~~~g~qd-Tl~~~~-~-~~~~~~c~I~G~vD---fi~G~~--~ 166 (181)
.++.+++.+|.+.. .++.+ .+.++.+++|.|....+ .+++.. + ..-+++|.|...-. ++.+.. .
T Consensus 54 ~~~~i~~~~~~~~~-------~~i~~~~~~~~~i~~~~i~~~~~~gi~~~~~~~~~~i~~n~~~~~~~~gi~~~~~~~~~ 126 (158)
T PF13229_consen 54 SNVTISNNTISDNG-------SGIYVSGSSNITIENNRIENNGDYGIYISNSSSNVTIENNTIHNNGGSGIYLEGGSSPN 126 (158)
T ss_dssp ES-EEES-EEES-S-------EEEECCS-CS-EEES-EEECSSS-SCE-TCEECS-EEES-EEECCTTSSCEEEECC--S
T ss_pred CCeEEECeEEEEcc-------ceEEEEecCCceecCcEEEcCCCccEEEeccCCCEEEEeEEEEeCcceeEEEECCCCCe
Confidence 55666666666543 23333 55666777777776655 666653 2 33566666665431 333333 5
Q ss_pred EEEEeeEEEe
Q 035494 167 TIFQNCQIMV 176 (181)
Q Consensus 167 ~~f~~c~i~~ 176 (181)
..|++|+|..
T Consensus 127 ~~i~~n~i~~ 136 (158)
T PF13229_consen 127 VTIENNTISN 136 (158)
T ss_dssp -EEECEEEEC
T ss_pred EEEEEEEEEe
Confidence 6666666654
No 92
>PLN02218 polygalacturonase ADPG
Probab=93.80 E-value=0.75 Score=41.16 Aligned_cols=64 Identities=6% Similarity=0.032 Sum_probs=42.1
Q ss_pred ecCCEEEEEeEEEeCC---CC-------------------CCCceEEEEEcCCceEEEeeEEeeeeeeEEecc-c-----
Q 035494 94 IGEGLFAKSMGFRNIA---GP-------------------ENGEAVAARVQSDRATFHNCRFEGYKNAVWAQT-H----- 145 (181)
Q Consensus 94 ~~~~~~~~nlti~N~~---~~-------------------~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~-~----- 145 (181)
.+++++++||+|.+.. +. .+..++|+.....++.+.+|.+.. .-++-+++ +
T Consensus 222 ~~~nV~i~~v~I~a~~~spNTDGIdi~ss~nV~I~n~~I~tGDDcIaIksgs~nI~I~n~~c~~-GHGisIGS~g~~~~~ 300 (431)
T PLN02218 222 KCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSNSIIGTGDDCISIESGSQNVQINDITCGP-GHGISIGSLGDDNSK 300 (431)
T ss_pred ceeeEEEEEEEEeCCCCCCCCCcEeecccceEEEEccEEecCCceEEecCCCceEEEEeEEEEC-CCCEEECcCCCCCCC
Confidence 5688999999998742 10 134556666677789999999853 33466654 1
Q ss_pred ----ceeeeccEEecce
Q 035494 146 ----RQFYRSCLITGTV 158 (181)
Q Consensus 146 ----~~~~~~c~I~G~v 158 (181)
.-++++|.+.+..
T Consensus 301 ~~V~nV~v~n~~~~~t~ 317 (431)
T PLN02218 301 AFVSGVTVDGAKLSGTD 317 (431)
T ss_pred ceEEEEEEEccEEecCC
Confidence 2357777777743
No 93
>PRK10531 acyl-CoA thioesterase; Provisional
Probab=93.39 E-value=0.45 Score=42.37 Aligned_cols=63 Identities=17% Similarity=0.109 Sum_probs=50.5
Q ss_pred ceEEEEEcCCceEEEeeEEeeee-----------eeEEecccceeeeccEEecceeeEEc-------------cccEEEE
Q 035494 115 EAVAARVQSDRATFHNCRFEGYK-----------NAVWAQTHRQFYRSCLITGTVDFIFG-------------DAATIFQ 170 (181)
Q Consensus 115 qa~al~~~~~~~~~~~c~~~g~q-----------dTl~~~~~~~~~~~c~I~G~vDfi~G-------------~~~~~f~ 170 (181)
....+.+.++.+.++|..|.... -.|++.+.+..|++|.+.|.=|=+|- .+..+|+
T Consensus 197 ~SATv~v~ad~F~a~NLTf~Ntag~~~~~~~~QAVALrv~GDra~fy~C~flG~QDTLy~~~~~~~~~~~~~~~gRqYf~ 276 (422)
T PRK10531 197 CSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDKVQIENVNILGRQDTFFVTNSGVQNRLETDRQPRTYVK 276 (422)
T ss_pred eeEEEEEECCCEEEEeeEEEeCCCCCCCCCcceeEEEEEcCCcEEEEeeEEecccceeeeccccccccccccccccEEEE
Confidence 45677789999999999998552 26777778889999999998886663 2489999
Q ss_pred eeEEEec
Q 035494 171 NCQIMVR 177 (181)
Q Consensus 171 ~c~i~~~ 177 (181)
+|.|+.-
T Consensus 277 ~CyIeG~ 283 (422)
T PRK10531 277 NSYIEGD 283 (422)
T ss_pred eCEEeec
Confidence 9999753
No 94
>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein. Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.
Probab=93.04 E-value=3 Score=37.55 Aligned_cols=107 Identities=10% Similarity=0.038 Sum_probs=55.1
Q ss_pred EEEEEcCcEE----E--eeEEEeccccCEEEEecCCCceEEEeeeecCCCCcccceeEEEEecCCEEEEEeEEEeCCCCC
Q 035494 39 FVIFVATGIY----E--ESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIYDAATFVAIGEGLFAKSMGFRNIAGPE 112 (181)
Q Consensus 39 ~tI~I~~G~Y----~--E~v~I~~~~~~vtl~G~~~~~~~I~~~~~~~~g~~~~~~a~~~v~~~~~~~~nlti~N~~~~~ 112 (181)
.+|...+|.. . +.+.+....++|+|.|. +|++.... +....+..+...++++++++++|+++..
T Consensus 89 ltL~G~~gAt~~vIdG~~~lIiai~A~nVTIsGL-----tIdGsG~d---l~~rdAgI~v~~a~~v~Iedn~L~gsg~-- 158 (455)
T TIGR03808 89 AQLIGVRGATRLVFTGGPSLLSSEGADGIGLSGL-----TLDGGGIP---LPQRRGLIHCQGGRDVRITDCEITGSGG-- 158 (455)
T ss_pred cEEEecCCcEEEEEcCCceEEEEecCCCeEEEee-----EEEeCCCc---ccCCCCEEEEccCCceEEEeeEEEcCCc--
Confidence 4555555542 1 33333333467777763 44443211 1122334444557999999999998842
Q ss_pred CCceEEEEEcCCceEEEeeEEeeee-eeEEecccc-eeeeccEEeccee
Q 035494 113 NGEAVAARVQSDRATFHNCRFEGYK-NAVWAQTHR-QFYRSCLITGTVD 159 (181)
Q Consensus 113 ~~qa~al~~~~~~~~~~~c~~~g~q-dTl~~~~~~-~~~~~c~I~G~vD 159 (181)
.++++++-+..+.++.+.+.+ ..++++... ...++..|+|.-|
T Consensus 159 ----FGI~L~~~~~~I~~N~I~g~~~~~I~lw~S~g~~V~~N~I~g~RD 203 (455)
T TIGR03808 159 ----NGIWLETVSGDISGNTITQIAVTAIVSFDALGLIVARNTIIGAND 203 (455)
T ss_pred ----ceEEEEcCcceEecceEeccccceEEEeccCCCEEECCEEEccCC
Confidence 355554433555566665552 234444322 2344555555444
No 95
>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]
Probab=92.39 E-value=1.9 Score=39.75 Aligned_cols=81 Identities=12% Similarity=0.260 Sum_probs=54.1
Q ss_pred EecCCEEEEEeEEEeCCCCCCCceEEEEE-cCCceEEEeeEEeeeeeeEEeccc------------c-eeeeccEEe-cc
Q 035494 93 AIGEGLFAKSMGFRNIAGPENGEAVAARV-QSDRATFHNCRFEGYKNAVWAQTH------------R-QFYRSCLIT-GT 157 (181)
Q Consensus 93 v~~~~~~~~nlti~N~~~~~~~qa~al~~-~~~~~~~~~c~~~g~qdTl~~~~~------------~-~~~~~c~I~-G~ 157 (181)
+.+++++++||+|.+.... -..++.. ...++.+.+|+|...+|.+++..| + .++++|+.. |.
T Consensus 267 ~~~~nl~~~nl~I~~~~~~---NtDG~d~~sc~NvlI~~~~fdtgDD~I~iksg~~~~~~~~~~~~~~i~i~~c~~~~gh 343 (542)
T COG5434 267 VDCDNLTFRNLTIDANRFD---NTDGFDPGSCSNVLIEGCRFDTGDDCIAIKSGAGLDGKKGYGPSRNIVIRNCYFSSGH 343 (542)
T ss_pred ecccCceecceEEECCCCC---CCCccccccceeEEEeccEEecCCceEEeecccCCcccccccccccEEEecceecccc
Confidence 4566677777777666542 3346666 456899999999999999999752 2 368999987 23
Q ss_pred eeeEEcc------ccEEEEeeEEEe
Q 035494 158 VDFIFGD------AATIFQNCQIMV 176 (181)
Q Consensus 158 vDfi~G~------~~~~f~~c~i~~ 176 (181)
--.+.|. ...++|+|.+..
T Consensus 344 G~~v~Gse~~ggv~ni~ved~~~~~ 368 (542)
T COG5434 344 GGLVLGSEMGGGVQNITVEDCVMDN 368 (542)
T ss_pred cceEeeeecCCceeEEEEEeeeecc
Confidence 3334432 246777777653
No 96
>PLN02793 Probable polygalacturonase
Probab=92.03 E-value=2 Score=38.57 Aligned_cols=65 Identities=8% Similarity=0.019 Sum_probs=43.4
Q ss_pred ecCCEEEEEeEEEeCC---C-------------------CCCCceEEEEEcCCceEEEeeEEeeeeeeEEecc-------
Q 035494 94 IGEGLFAKSMGFRNIA---G-------------------PENGEAVAARVQSDRATFHNCRFEGYKNAVWAQT------- 144 (181)
Q Consensus 94 ~~~~~~~~nlti~N~~---~-------------------~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~------- 144 (181)
.+.+++++||+|.+.. + ..+..++++...+.++.++||..... -++-+++
T Consensus 207 ~~~nv~i~~l~I~~p~~spNTDGIdi~~s~nV~I~n~~I~~gDDcIaik~~s~nI~I~n~~c~~G-hGisIGSlg~~~~~ 285 (443)
T PLN02793 207 NCRRVTISGLKVIAPATSPNTDGIHISASRGVVIKDSIVRTGDDCISIVGNSSRIKIRNIACGPG-HGISIGSLGKSNSW 285 (443)
T ss_pred ccCcEEEEEEEEECCCCCCCCCcEeeeccceEEEEeCEEeCCCCeEEecCCcCCEEEEEeEEeCC-ccEEEecccCcCCC
Confidence 4678999999998743 1 01345667766788999999998533 2455543
Q ss_pred ---cceeeeccEEeccee
Q 035494 145 ---HRQFYRSCLITGTVD 159 (181)
Q Consensus 145 ---~~~~~~~c~I~G~vD 159 (181)
..-.++||.+.+...
T Consensus 286 ~~V~nV~v~n~~~~~t~~ 303 (443)
T PLN02793 286 SEVRDITVDGAFLSNTDN 303 (443)
T ss_pred CcEEEEEEEccEEeCCCc
Confidence 123688888887643
No 97
>PLN03003 Probable polygalacturonase At3g15720
Probab=91.76 E-value=1.9 Score=38.88 Aligned_cols=63 Identities=8% Similarity=0.077 Sum_probs=42.2
Q ss_pred ecCCEEEEEeEEEeC---CC-------------------CCCCceEEEEEcCCceEEEeeEEeeeeeeEEecc-------
Q 035494 94 IGEGLFAKSMGFRNI---AG-------------------PENGEAVAARVQSDRATFHNCRFEGYKNAVWAQT------- 144 (181)
Q Consensus 94 ~~~~~~~~nlti~N~---~~-------------------~~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~------- 144 (181)
.++++++++|+|.+. .+ ..+...+|+.....++.+++|...+. -++-+++
T Consensus 168 ~c~nV~i~~l~I~ap~~spNTDGIDi~~S~nV~I~n~~I~tGDDCIaiksgs~NI~I~n~~c~~G-HGISIGSlg~~g~~ 246 (456)
T PLN03003 168 ECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPG-HGISIGSLGKDGET 246 (456)
T ss_pred ccccEEEEEEEEeCCCCCCCCCcEeecCcceEEEEecEEecCCCeEEeCCCCccEEEEeeEEECC-CCeEEeeccCCCCc
Confidence 468899999999862 11 01345566666677999999988532 3555543
Q ss_pred ---cceeeeccEEecc
Q 035494 145 ---HRQFYRSCLITGT 157 (181)
Q Consensus 145 ---~~~~~~~c~I~G~ 157 (181)
.+-+++||.+.+.
T Consensus 247 ~~V~NV~v~n~~~~~T 262 (456)
T PLN03003 247 ATVENVCVQNCNFRGT 262 (456)
T ss_pred ceEEEEEEEeeEEECC
Confidence 1236899999885
No 98
>PLN02155 polygalacturonase
Probab=91.67 E-value=2.1 Score=37.91 Aligned_cols=81 Identities=10% Similarity=0.070 Sum_probs=49.1
Q ss_pred ecCCEEEEEeEEEeCC---CC-------------------CCCceEEEEEcCCceEEEeeEEeeeeeeEEecc-------
Q 035494 94 IGEGLFAKSMGFRNIA---GP-------------------ENGEAVAARVQSDRATFHNCRFEGYKNAVWAQT------- 144 (181)
Q Consensus 94 ~~~~~~~~nlti~N~~---~~-------------------~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~------- 144 (181)
.+.++++++|+|.+.. +. .+..++|+.....++.+.+|.+.+ .-++-.++
T Consensus 175 ~~~nv~i~~v~I~~p~~~~NtDGidi~~s~nV~I~~~~I~~gDDcIaik~gs~nI~I~n~~c~~-GhGisIGS~g~~~~~ 253 (394)
T PLN02155 175 GCTNVVVRNVKLVAPGNSPNTDGFHVQFSTGVTFTGSTVQTGDDCVAIGPGTRNFLITKLACGP-GHGVSIGSLAKELNE 253 (394)
T ss_pred CeeeEEEEEEEEECCCCCCCCCccccccceeEEEEeeEEecCCceEEcCCCCceEEEEEEEEEC-CceEEeccccccCCC
Confidence 4588999999998742 10 124456665566799999988874 24555554
Q ss_pred ---cceeeeccEEeccee--eE--E-ccccEEEEeeEEE
Q 035494 145 ---HRQFYRSCLITGTVD--FI--F-GDAATIFQNCQIM 175 (181)
Q Consensus 145 ---~~~~~~~c~I~G~vD--fi--~-G~~~~~f~~c~i~ 175 (181)
.+-++++|.+.+..- .| | +.+.++.++.++.
T Consensus 254 ~~V~nV~v~n~~~~~t~~GirIKT~~~~~gG~v~nI~f~ 292 (394)
T PLN02155 254 DGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQ 292 (394)
T ss_pred CcEEEEEEEeeEEeCCCcEEEEEEecCCCCEEEEEEEEE
Confidence 123688888887432 33 4 2233455555443
No 99
>PLN03010 polygalacturonase
Probab=89.59 E-value=5.5 Score=35.45 Aligned_cols=64 Identities=6% Similarity=0.038 Sum_probs=38.1
Q ss_pred ecCCEEEEEeEEEeCC---CC-------------------CCCceEEEEEcCCceEEEeeEEeeeeeeEEecc-------
Q 035494 94 IGEGLFAKSMGFRNIA---GP-------------------ENGEAVAARVQSDRATFHNCRFEGYKNAVWAQT------- 144 (181)
Q Consensus 94 ~~~~~~~~nlti~N~~---~~-------------------~~~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~------- 144 (181)
.+++++++||+|.+.. +. .+...+|+...+.++.+.++...+. -++-+++
T Consensus 187 ~~~nv~i~~i~I~a~~~s~NTDGiDi~~s~nV~I~n~~I~~gDDcIaiksgs~ni~I~~~~C~~g-HGisIGS~g~~~~~ 265 (409)
T PLN03010 187 TCNYVAISKINILAPETSPNTDGIDISYSTNINIFDSTIQTGDDCIAINSGSSNINITQINCGPG-HGISVGSLGADGAN 265 (409)
T ss_pred ccccEEEEEEEEeCCCCCCCCCceeeeccceEEEEeeEEecCCCeEEecCCCCcEEEEEEEeECc-CCEEEccCCCCCCC
Confidence 3577888888887642 10 1244566666666777776666532 2455543
Q ss_pred ---cceeeeccEEecce
Q 035494 145 ---HRQFYRSCLITGTV 158 (181)
Q Consensus 145 ---~~~~~~~c~I~G~v 158 (181)
..-+|+||.|.+..
T Consensus 266 ~~V~nV~v~n~~i~~t~ 282 (409)
T PLN03010 266 AKVSDVHVTHCTFNQTT 282 (409)
T ss_pred CeeEEEEEEeeEEeCCC
Confidence 12368899988753
No 100
>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....
Probab=87.45 E-value=3.3 Score=35.46 Aligned_cols=83 Identities=13% Similarity=0.147 Sum_probs=60.2
Q ss_pred eeEEEEe-cCCEEEEEeEEEeCCCCCCCceEEEEE-cCCceEEEeeEEeee-----eeeEEeccc-ceeeeccEEeccee
Q 035494 88 AATFVAI-GEGLFAKSMGFRNIAGPENGEAVAARV-QSDRATFHNCRFEGY-----KNAVWAQTH-RQFYRSCLITGTVD 159 (181)
Q Consensus 88 ~a~~~v~-~~~~~~~nlti~N~~~~~~~qa~al~~-~~~~~~~~~c~~~g~-----qdTl~~~~~-~~~~~~c~I~G~vD 159 (181)
...|.+. .+++++++|+++|+.. -.+.+ .++++.+++.++.+. -|++=+... +..+++|+|...-|
T Consensus 92 p~~i~~~~~~~~~i~~i~~~nsp~------w~~~~~~~~nv~i~~i~I~~~~~~~NtDGid~~~s~nv~I~n~~i~~gDD 165 (326)
T PF00295_consen 92 PRLIRFNNCKNVTIEGITIRNSPF------WHIHINDCDNVTISNITINNPANSPNTDGIDIDSSKNVTIENCFIDNGDD 165 (326)
T ss_dssp SESEEEEEEEEEEEESEEEES-SS------ESEEEESEEEEEEESEEEEEGGGCTS--SEEEESEEEEEEESEEEESSSE
T ss_pred cceeeeeeecceEEEeeEecCCCe------eEEEEEccCCeEEcceEEEecCCCCCcceEEEEeeeEEEEEEeecccccC
Confidence 3445554 5789999999998753 23444 688999999999853 578888775 45899999998888
Q ss_pred eEEccc---cEEEEeeEEEe
Q 035494 160 FIFGDA---ATIFQNCQIMV 176 (181)
Q Consensus 160 fi~G~~---~~~f~~c~i~~ 176 (181)
-|.=.+ ..++++|.+..
T Consensus 166 ~Iaiks~~~ni~v~n~~~~~ 185 (326)
T PF00295_consen 166 CIAIKSGSGNILVENCTCSG 185 (326)
T ss_dssp SEEESSEECEEEEESEEEES
T ss_pred cccccccccceEEEeEEEec
Confidence 776543 46999999863
No 101
>PF03718 Glyco_hydro_49: Glycosyl hydrolase family 49; InterPro: IPR005192 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of dextranase (3.2.1.11 from EC) and isopullulanase (3.2.1.57 from EC) which are all members of glycoside hydrolase family 49 (GH49 from CAZY). Dextranase hydrolyses alpha-1,6-glycosidic bonds in dextran polymers.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1X0C_A 1WMR_A 2Z8G_B 1OGM_X 1OGO_X.
Probab=84.86 E-value=14 Score=34.15 Aligned_cols=76 Identities=14% Similarity=0.127 Sum_probs=33.2
Q ss_pred cCCEEEEEeEEEeCCCCCCCceEEEEEcCC---ceEEEeeEEee----eeeeEEecccceeeeccEEecceeeEEc-ccc
Q 035494 95 GEGLFAKSMGFRNIAGPENGEAVAARVQSD---RATFHNCRFEG----YKNAVWAQTHRQFYRSCLITGTVDFIFG-DAA 166 (181)
Q Consensus 95 ~~~~~~~nlti~N~~~~~~~qa~al~~~~~---~~~~~~c~~~g----~qdTl~~~~~~~~~~~c~I~G~vDfi~G-~~~ 166 (181)
+.+++++++||.++..- ..-|+-..+ +..+.+-+..| .-|++.+. .....++|.+.-+-|.|=- ...
T Consensus 328 ~q~~~~~GiTI~~pP~~----Sm~l~g~~~~~~~~~i~nyKqVGaW~~qtDGi~ly-~nS~i~dcF~h~nDD~iKlYhS~ 402 (582)
T PF03718_consen 328 GQTLTCEGITINDPPFH----SMDLYGNENDKFSMNISNYKQVGAWYFQTDGIELY-PNSTIRDCFIHVNDDAIKLYHSN 402 (582)
T ss_dssp SEEEEEES-EEE--SS-----SEEEESSSGGGEEEEEEEEEEE---CTT----B---TT-EEEEEEEEESS-SEE--STT
T ss_pred cceEEEEeeEecCCCcc----eEEecCCccccccceeeceeeeeeEEeccCCcccc-CCCeeeeeEEEecCchhheeecC
Confidence 45789999999876421 122221221 24555555554 24555444 2234567777777776511 244
Q ss_pred EEEEeeEEE
Q 035494 167 TIFQNCQIM 175 (181)
Q Consensus 167 ~~f~~c~i~ 175 (181)
+..++|.|-
T Consensus 403 v~v~~~ViW 411 (582)
T PF03718_consen 403 VSVSNTVIW 411 (582)
T ss_dssp EEEEEEEEE
T ss_pred cceeeeEEE
Confidence 555666553
No 102
>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A ....
Probab=80.91 E-value=15 Score=28.52 Aligned_cols=86 Identities=16% Similarity=0.208 Sum_probs=51.0
Q ss_pred EEEEe-cCCEEEEEeEEEeCCCCC------------CCceE-EEEEcC--CceEEEeeEEeeeeeeEEecccceeeeccE
Q 035494 90 TFVAI-GEGLFAKSMGFRNIAGPE------------NGEAV-AARVQS--DRATFHNCRFEGYKNAVWAQTHRQFYRSCL 153 (181)
Q Consensus 90 ~~~v~-~~~~~~~nlti~N~~~~~------------~~qa~-al~~~~--~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~ 153 (181)
.+... +.++.++|++++|..... ..-.. .+.++. +.+.+.+|.+.+..++++.+.....++||.
T Consensus 114 ~i~~~~~~~~~i~nv~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~n~~ 193 (225)
T PF12708_consen 114 GIRFNSSQNVSISNVRIENSGGDGIYFNTGTDYRIIGSTHVSGIFIDNGSNNVIVNNCIFNGGDNGIILGNNNITISNNT 193 (225)
T ss_dssp EEEETTEEEEEEEEEEEES-SS-SEEEECCEECEEECCEEEEEEEEESCEEEEEEECEEEESSSCSEECEEEEEEEECEE
T ss_pred EEEEEeCCeEEEEeEEEEccCccEEEEEccccCcEeecccceeeeeccceeEEEECCccccCCCceeEeecceEEEEeEE
Confidence 34443 478999999999874321 00011 333333 335557777777777755544455789999
Q ss_pred Eecc--ee-eEEccccEEEEeeEEE
Q 035494 154 ITGT--VD-FIFGDAATIFQNCQIM 175 (181)
Q Consensus 154 I~G~--vD-fi~G~~~~~f~~c~i~ 175 (181)
+++. .. .+-+....++++|+|.
T Consensus 194 ~~~~~~~gi~i~~~~~~~i~n~~i~ 218 (225)
T PF12708_consen 194 FEGNCGNGINIEGGSNIIISNNTIE 218 (225)
T ss_dssp EESSSSESEEEEECSEEEEEEEEEE
T ss_pred ECCccceeEEEECCeEEEEEeEEEE
Confidence 9872 22 3445556788888876
No 103
>TIGR03804 para_beta_helix parallel beta-helix repeat (two copies). This model represents a tandem pair of an approximately 22-amino acid (each) repeat homologous to the beta-strand repeats that stack in a right-handed parallel beta-helix in the periplasmic C-5 mannuronan epimerase, AlgA, of Pseudomonas aeruginosa. A homology domain consisting of a longer tandem array of these repeats is described in the SMART database as CASH (SM00722), and is found in many carbohydrate-binding proteins and sugar hydrolases. A single repeat is represented by SM00710. This TIGRFAMs model represents a flavor of the parallel beta-helix-forming repeat based on prokaryotic sequences only in its seed alignment, although it also finds many eukaryotic sequences.
Probab=79.53 E-value=3.7 Score=24.13 Aligned_cols=24 Identities=13% Similarity=0.162 Sum_probs=19.7
Q ss_pred cCCceEEEeeEEeeeeeeEEeccc
Q 035494 122 QSDRATFHNCRFEGYKNAVWAQTH 145 (181)
Q Consensus 122 ~~~~~~~~~c~~~g~qdTl~~~~~ 145 (181)
.+.+..+.++.+.+..|++++...
T Consensus 6 ~s~~~~i~~N~i~~~~~GI~~~~s 29 (44)
T TIGR03804 6 SSSNNTLENNTASNNSYGIYLTDS 29 (44)
T ss_pred ecCCCEEECcEEeCCCCEEEEEeC
Confidence 455667999999999999999766
No 104
>COG4677 PemB Pectin methylesterase [Carbohydrate transport and metabolism]
Probab=75.82 E-value=15 Score=31.93 Aligned_cols=86 Identities=13% Similarity=0.235 Sum_probs=54.5
Q ss_pred EEEEecCCEEEEEeEEEeCCC-----CCCCceEEEEEc-CCceEEEeeEEeeeeeeEEecccceeeeccEEecc------
Q 035494 90 TFVAIGEGLFAKSMGFRNIAG-----PENGEAVAARVQ-SDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGT------ 157 (181)
Q Consensus 90 ~~~v~~~~~~~~nlti~N~~~-----~~~~qa~al~~~-~~~~~~~~c~~~g~qdTl~~~~~~~~~~~c~I~G~------ 157 (181)
.|..+++...++|+.+.-.-. ...-| .-+... .-|..|.||-|.|.=|=++- .|...|.+|.|.=.
T Consensus 215 aL~~dgDka~frnv~llg~QdTlFv~~~~~~-~~~~tn~~~R~yftNsyI~GdvDfIfG-sgtaVFd~c~i~~~d~r~~~ 292 (405)
T COG4677 215 ALATDGDKAIFRNVNLLGNQDTLFVGNSGVQ-NRLETNRQPRTYFTNSYIEGDVDFIFG-SGTAVFDNCEIQVVDSRTQQ 292 (405)
T ss_pred EEEecCCceeeeeeeEeeccceEEecCCCCc-cccccCcchhhheecceecccceEEec-cceEEeccceEEEeccCCCc
Confidence 445678899999999983211 00111 011111 22889999999997776553 46778999999842
Q ss_pred eeeEEcccc-------EEEEeeEEEec
Q 035494 158 VDFIFGDAA-------TIFQNCQIMVR 177 (181)
Q Consensus 158 vDfi~G~~~-------~~f~~c~i~~~ 177 (181)
-.|||.-.+ -++-||.|..-
T Consensus 293 ~gYIfApST~~~~~YGflalNsrfna~ 319 (405)
T COG4677 293 EGYIFAPSTLSGIPYGFLALNSRFNAS 319 (405)
T ss_pred ceeEeccCCCCCCceeEEEEeeeeecC
Confidence 348887543 46777777643
No 105
>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]
Probab=73.61 E-value=5.4 Score=36.80 Aligned_cols=75 Identities=15% Similarity=0.216 Sum_probs=49.8
Q ss_pred cCCEEEEEeEEEeCCCCCCCceEEEE-EcCCceEEEeeEEeeeee----eEEecccc-eeeeccEEecceeeEEcc---c
Q 035494 95 GEGLFAKSMGFRNIAGPENGEAVAAR-VQSDRATFHNCRFEGYKN----AVWAQTHR-QFYRSCLITGTVDFIFGD---A 165 (181)
Q Consensus 95 ~~~~~~~nlti~N~~~~~~~qa~al~-~~~~~~~~~~c~~~g~qd----Tl~~~~~~-~~~~~c~I~G~vDfi~G~---~ 165 (181)
..++.+++++|.|+.- + .+. +.++++.|.|-.+..+.+ .|=..+.+ ....+|+|.=.-|-|+=. +
T Consensus 246 c~NV~~~g~~i~ns~~----~--~~h~~~~~nl~~~nl~I~~~~~~NtDG~d~~sc~NvlI~~~~fdtgDD~I~iksg~~ 319 (542)
T COG5434 246 CRNVLLEGLNIKNSPL----W--TVHPVDCDNLTFRNLTIDANRFDNTDGFDPGSCSNVLIEGCRFDTGDDCIAIKSGAG 319 (542)
T ss_pred cceEEEeeeEecCCCc----E--EEeeecccCceecceEEECCCCCCCCccccccceeEEEeccEEecCCceEEeecccC
Confidence 4688999999998753 2 333 478888888888876655 66565543 467788887655655421 1
Q ss_pred -c----------EEEEeeEEE
Q 035494 166 -A----------TIFQNCQIM 175 (181)
Q Consensus 166 -~----------~~f~~c~i~ 175 (181)
. .+|-+|.+.
T Consensus 320 ~~~~~~~~~~~~i~i~~c~~~ 340 (542)
T COG5434 320 LDGKKGYGPSRNIVIRNCYFS 340 (542)
T ss_pred CcccccccccccEEEecceec
Confidence 2 577777764
No 106
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=55.82 E-value=1.1e+02 Score=25.77 Aligned_cols=26 Identities=27% Similarity=0.629 Sum_probs=13.5
Q ss_pred eeeccEEecceeeEEccccEEEEeeEE
Q 035494 148 FYRSCLITGTVDFIFGDAATIFQNCQI 174 (181)
Q Consensus 148 ~~~~c~I~G~vDfi~G~~~~~f~~c~i 174 (181)
-|-||.|+|.=-+=+-.. ...+||++
T Consensus 197 tliNC~I~g~QpLCY~~~-L~l~nC~~ 222 (277)
T PF12541_consen 197 TLINCTIEGTQPLCYCDN-LVLENCTM 222 (277)
T ss_pred EEEEeEEeccCccEeecc-eEEeCcEe
Confidence 466777777654433332 23445544
No 107
>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O. To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].
Probab=55.18 E-value=1.1e+02 Score=24.40 Aligned_cols=36 Identities=11% Similarity=0.133 Sum_probs=19.5
Q ss_pred cCCceEEEeeEEeeeeeeEEeccc-ceeeeccEEecc
Q 035494 122 QSDRATFHNCRFEGYKNAVWAQTH-RQFYRSCLITGT 157 (181)
Q Consensus 122 ~~~~~~~~~c~~~g~qdTl~~~~~-~~~~~~c~I~G~ 157 (181)
.+....+.++.|......+++... +..+.++.|+++
T Consensus 108 ~s~~~~I~~N~i~~~~~GI~l~~s~~n~I~~N~i~~n 144 (236)
T PF05048_consen 108 GSSNNTISNNTISNNGYGIYLSSSSNNTITGNTISNN 144 (236)
T ss_pred eCCceEEECcEEeCCCEEEEEEeCCCCEEECeEEeCC
Confidence 344455666666655666666542 334555555554
No 108
>PRK09752 adhesin; Provisional
Probab=54.54 E-value=2.6e+02 Score=28.70 Aligned_cols=69 Identities=13% Similarity=0.140 Sum_probs=39.7
Q ss_pred eeEEEEecCCEEEEEeEEEeCCCCCCCceEEEEEcCC------ceEEEeeEEeeeee------eEEecccceeeeccEEe
Q 035494 88 AATFVAIGEGLFAKSMGFRNIAGPENGEAVAARVQSD------RATFHNCRFEGYKN------AVWAQTHRQFYRSCLIT 155 (181)
Q Consensus 88 ~a~~~v~~~~~~~~nlti~N~~~~~~~qa~al~~~~~------~~~~~~c~~~g~qd------Tl~~~~~~~~~~~c~I~ 155 (181)
+|.+......+++.++.|+|.... ...=||+..+. .+.+.+|.|.++.- .||...+...+.+|...
T Consensus 113 GAIya~~~~~itI~ns~F~nN~A~--g~GGAIYa~G~n~~g~v~l~I~NS~F~nN~A~~G~GGAIYs~ng~vtIsnS~F~ 190 (1250)
T PRK09752 113 GAIFAKENSTLNLTDVIFSGNVAG--GYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFD 190 (1250)
T ss_pred cEEEecCcceeEEeeeEEEccccC--CCCCEEEEcccCCCcceEEEEEecEEEccccccCCCCEEEEccCcEEEEeeEEe
Confidence 444443234477778888876532 22236665543 26677777776632 36765555566677776
Q ss_pred cce
Q 035494 156 GTV 158 (181)
Q Consensus 156 G~v 158 (181)
+|.
T Consensus 191 nN~ 193 (1250)
T PRK09752 191 NNQ 193 (1250)
T ss_pred CCc
Confidence 664
No 109
>PF01696 Adeno_E1B_55K: Adenovirus EB1 55K protein / large t-antigen; InterPro: IPR002612 This family consists of adenovirus E1B 55 kDa protein or large t-antigen. E1B 55 kDa binds p53 the tumor suppressor protein converting it from a transcriptional activator which responds to damaged DNA in to an unregulated repressor of genes with a p53 binding site []. This protects the virus against p53 induced host antiviral responses and prevents apoptosis as induced by the adenovirus E1A protein []. The E1B region of adenovirus encodes two proteins E1B 55 kDa, the large t-antigen as found in this family and E1B 19 kDa IPR002924 from INTERPRO, the small t-antigen. Both of these proteins inhibit E1A induced apoptosis.
Probab=52.75 E-value=1.7e+02 Score=26.03 Aligned_cols=52 Identities=23% Similarity=0.419 Sum_probs=37.7
Q ss_pred CceEEEeeEEeee---eeeEEecccceeeeccEEec-ceeeEEccccEEEEeeEEE
Q 035494 124 DRATFHNCRFEGY---KNAVWAQTHRQFYRSCLITG-TVDFIFGDAATIFQNCQIM 175 (181)
Q Consensus 124 ~~~~~~~c~~~g~---qdTl~~~~~~~~~~~c~I~G-~vDfi~G~~~~~f~~c~i~ 175 (181)
.++.|.||+|.+. +-+++.......|.+|.-.| .-.-+.-.+.+...+|+|.
T Consensus 121 ~~VtF~ni~F~~~~~~~g~~f~~~t~~~~hgC~F~gf~g~cl~~~~~~~VrGC~F~ 176 (386)
T PF01696_consen 121 EGVTFVNIRFEGRDTFSGVVFHANTNTLFHGCSFFGFHGTCLESWAGGEVRGCTFY 176 (386)
T ss_pred eeeEEEEEEEecCCccceeEEEecceEEEEeeEEecCcceeEEEcCCcEEeeeEEE
Confidence 5889999999954 56777777778999999998 4444555555665666653
No 110
>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]
Probab=48.42 E-value=1.3e+02 Score=26.05 Aligned_cols=39 Identities=15% Similarity=0.380 Sum_probs=29.0
Q ss_pred EEEEc-CCceEEEeeEEeeee------eeEEe-cccce-eeeccEEec
Q 035494 118 AARVQ-SDRATFHNCRFEGYK------NAVWA-QTHRQ-FYRSCLITG 156 (181)
Q Consensus 118 al~~~-~~~~~~~~c~~~g~q------dTl~~-~~~~~-~~~~c~I~G 156 (181)
.|.+. ++++.|+|..|++.- |.+-+ ..+++ |..+|...+
T Consensus 118 gl~i~~a~NVIirNltf~~~~~~d~~~D~Isi~~~~~nIWIDH~tf~~ 165 (345)
T COG3866 118 GLKIRDAGNVIIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFSG 165 (345)
T ss_pred eEEEEeCCcEEEEeeEEEeeccCCCCCCcEEeccCCeEEEEEeeEecc
Confidence 45554 899999999999875 77777 44443 788888775
No 111
>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A.
Probab=46.83 E-value=1e+02 Score=27.73 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=19.5
Q ss_pred CceEEEEEcCCceEEEeeEEeeeeeeEEeccc
Q 035494 114 GEAVAARVQSDRATFHNCRFEGYKNAVWAQTH 145 (181)
Q Consensus 114 ~qa~al~~~~~~~~~~~c~~~g~qdTl~~~~~ 145 (181)
+....|++++..-.++++.|+..|-+|-+..|
T Consensus 213 GE~EIISvKS~~N~ir~Ntf~es~G~ltlRHG 244 (425)
T PF14592_consen 213 GEVEIISVKSSDNTIRNNTFRESQGSLTLRHG 244 (425)
T ss_dssp SSSEEEEEESBT-EEES-EEES-SSEEEEEE-
T ss_pred CceeEEEeecCCceEeccEEEeccceEEEecC
Confidence 34567777777777777777777777777655
No 112
>PF03077 VacA2: Putative vacuolating cytotoxin; InterPro: IPR004311 Proteins containing this domain include a number of Helicobacter pylori outer membrane proteins with multiple copies of this small conserved region.
Probab=46.25 E-value=49 Score=21.43 Aligned_cols=28 Identities=11% Similarity=-0.025 Sum_probs=22.1
Q ss_pred CCcccceeEEEEec-CCEEEEEeEEEeCC
Q 035494 82 GVNIYDAATFVAIG-EGLFAKSMGFRNIA 109 (181)
Q Consensus 82 g~~~~~~a~~~v~~-~~~~~~nlti~N~~ 109 (181)
.+++-.+|+|...+ +++++.+++|.|..
T Consensus 26 ~~~tGGgA~l~Fna~~~it~~~a~~~n~~ 54 (60)
T PF03077_consen 26 AWGTGGGATLNFNATNNITINGANIDNNK 54 (60)
T ss_pred ccccCCCeEEEEeccceEEEccceEeccc
Confidence 34455678998887 67999999999875
No 113
>COG3420 NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism]
Probab=41.24 E-value=1.3e+02 Score=26.49 Aligned_cols=64 Identities=13% Similarity=0.081 Sum_probs=49.5
Q ss_pred eEEEEEcCCceEEEeeEEeeeeeeEEecc---------cceeeeccEEeccee--eEEccccEEEEeeEEEecCC
Q 035494 116 AVAARVQSDRATFHNCRFEGYKNAVWAQT---------HRQFYRSCLITGTVD--FIFGDAATIFQNCQIMVRKP 179 (181)
Q Consensus 116 a~al~~~~~~~~~~~c~~~g~qdTl~~~~---------~~~~~~~c~I~G~vD--fi~G~~~~~f~~c~i~~~~~ 179 (181)
.-.+.+.+..++++.|.+++..+-|.... .+.-.++|.|.|+.= +++|...++.+.-+|..+..
T Consensus 69 G~~vtv~aP~~~v~Gl~vr~sg~~lp~m~agI~v~~~at~A~Vr~N~l~~n~~Gi~l~~s~d~~i~~n~i~G~~~ 143 (408)
T COG3420 69 GSYVTVAAPDVIVEGLTVRGSGRSLPAMDAGIFVGRTATGAVVRHNDLIGNSFGIYLHGSADVRIEGNTIQGLAD 143 (408)
T ss_pred ccEEEEeCCCceeeeEEEecCCCCcccccceEEeccCcccceEEcccccccceEEEEeccCceEEEeeEEeeccc
Confidence 35777888899999999998877665542 345688898888633 78888899999999887654
No 114
>smart00656 Amb_all Amb_all domain.
Probab=40.44 E-value=1.8e+02 Score=22.79 Aligned_cols=35 Identities=9% Similarity=0.126 Sum_probs=25.0
Q ss_pred CCceEEEeeEEeee-------eeeEEeccc-ceeeeccEEecc
Q 035494 123 SDRATFHNCRFEGY-------KNAVWAQTH-RQFYRSCLITGT 157 (181)
Q Consensus 123 ~~~~~~~~c~~~g~-------qdTl~~~~~-~~~~~~c~I~G~ 157 (181)
++++.++|-+|++- .|++.+... +-++.+|.+...
T Consensus 39 ~~NVIirnl~i~~~~~~~~~~~D~i~~~~~~~VwIDHct~s~~ 81 (190)
T smart00656 39 VSNVIIRNLTIHDPKPVYGSDGDAISIDGSSNVWIDHVSLSGC 81 (190)
T ss_pred cceEEEeCCEEECCccCCCCCCCEEEEeCCCeEEEEccEeEcc
Confidence 55777777777742 478888654 348899998875
No 115
>smart00710 PbH1 Parallel beta-helix repeats. The tertiary structures of pectate lyases and rhamnogalacturonase A show a stack of parallel beta strands that are coiled into a large helix. Each coil of the helix represents a structural repeat that, in some homologues, can be recognised from sequence information alone. Conservation of asparagines might be connected with asparagine-ladders that contribute to the stability of the fold. Proteins containing these repeats most often are enzymes with polysaccharide substrates.
Probab=36.13 E-value=49 Score=15.86 Aligned_cols=11 Identities=18% Similarity=0.190 Sum_probs=5.0
Q ss_pred eEEEeeEEeee
Q 035494 126 ATFHNCRFEGY 136 (181)
Q Consensus 126 ~~~~~c~~~g~ 136 (181)
+.+.+|.|.+.
T Consensus 4 ~~i~~n~i~~~ 14 (26)
T smart00710 4 VTIENNTIRNN 14 (26)
T ss_pred EEEECCEEEeC
Confidence 34444444444
No 116
>PF00544 Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pectate lyase 4.2.2.2 from EC is an enzyme involved in the maceration and soft rotting of plant tissue. Pectate lyase is responsible for the eliminative cleavage of pectate, yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups at their non-reducing ends. The protein is maximally expressed late in pollen development. It has been suggested that the pollen expression of pectate lyase genes might relate to a requirement for pectin degradation during pollen tube growth []. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail [,]. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Amb a 1, Amb a 2, Amb a 3, Cha o 1, Cup a 1, Cry j 1, Jun a 1. Two of the major allergens in the pollen of short ragweed (Ambrosia artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII has been deduced and has been shown to share ~65% sequence identity with the Amb alpha I multigene family of allergens []. Members of the Amb aI/aII family include Nicotiana tabacum (Common tobacco) pectate lyase, which is similar to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in Solanum lycopersicum (Tomato) (Lycopersicon esculentum) []; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica (Japanese cedar) - the most common pollen allergen in Japan []; and P56 and P59, which share sequence similarity with pectate lyases of plant pathogenic bacteria [].; PDB: 1O8M_A 1O8K_A 1O8E_A 1O8H_A 2PEC_A 1PLU_A 1O8I_A 1O8J_A 1O8D_A 1O8F_A ....
Probab=31.51 E-value=2.1e+02 Score=22.56 Aligned_cols=36 Identities=14% Similarity=0.240 Sum_probs=22.8
Q ss_pred cCCceEEEeeEEee----------------eeeeEEeccc-ceeeeccEEecc
Q 035494 122 QSDRATFHNCRFEG----------------YKNAVWAQTH-RQFYRSCLITGT 157 (181)
Q Consensus 122 ~~~~~~~~~c~~~g----------------~qdTl~~~~~-~~~~~~c~I~G~ 157 (181)
.+.++.++|-+|+. ..|.+.+..+ +-++.+|.+...
T Consensus 44 ~~~NVIirNl~~~~~~~~~~~~~~~~~~~~~~Dai~i~~~~nVWIDH~sfs~~ 96 (200)
T PF00544_consen 44 GASNVIIRNLRFRNVPVDPGPDWSGDGDSSDGDAISIDNSSNVWIDHCSFSWG 96 (200)
T ss_dssp SCEEEEEES-EEECEEEECSTEEETTEEECS--SEEEESTEEEEEES-EEEET
T ss_pred CCCeEEEECCEEEeccccCCcccCCCccccCCCeEEEEecccEEEeccEEecc
Confidence 56777788877776 4677766554 458888888876
No 117
>PF12421 DUF3672: Fibronectin type III protein ; InterPro: IPR021034 This entry represents a region of bacterial and viral proteins that are typically between 126 and 146 amino acids in length. The signature is found at the C terminus in association with PF09327 from PFAM and PF00041 from PFAM. There are two completely conserved G residues that may be functionally important. Many of the proteins in this entry are annotated as fibronectin type III however there is little accompanying literature to confirm this. It is also found in Host specificity protein J from Enterobacteria phage lambda (Bacteriophage lambda).
Probab=30.41 E-value=1e+02 Score=23.07 Aligned_cols=16 Identities=31% Similarity=0.715 Sum_probs=9.5
Q ss_pred ceEEEeeEEeeeeeeEEec
Q 035494 125 RATFHNCRFEGYKNAVWAQ 143 (181)
Q Consensus 125 ~~~~~~c~~~g~qdTl~~~ 143 (181)
.+.-++|.|.| ||++.
T Consensus 28 ~~~~~~~~~~G---tv~A~ 43 (136)
T PF12421_consen 28 VTIAESCTFKG---TVYAN 43 (136)
T ss_pred eEEcccceEEe---EEEeh
Confidence 34556677765 56654
No 118
>PF10662 PduV-EutP: Ethanolamine utilisation - propanediol utilisation; InterPro: IPR012381 Members of this family function in ethanolamine [] and propanediol [] degradation pathways. Both pathways require coenzyme B12 (adenosylcobalamin, AdoCbl). Bacteria that harbour these pathways can use ethanolamine as a source of carbon and nitrogen, or propanediol as a sole carbon and energy source, respectively. The exact roles of the EutP and PduV proteins in these respective pathways are not yet determined. Members of this family contain P-loop consensus motifs in the N-terminal part, and are distantly related to various GTPases and ATPases, including ATPase components of transport systems. Propanediol degradation is thought to be important for the natural Salmonella populations, since propanediol is produced by the fermentation of the common plant sugars rhamnose and fucose [, ]. More than 1% of the Salmonella enterica genome is devoted to the utilisation of propanediol and cobalamin biosynthesis. In vivo expression technology has indicated that propanediol utilisation (pdu) genes may be important for growth in host tissues, and competitive index studies with mice have shown that pdu mutations confer a virulence defect [, ]. The pdu operon is contiguous and co-regulated with the cobalamin (B12) biosynthesis cob operon, indicating that propanediol catabolism may be the primary reason for de novo B12 synthesis in Salmonella [, , ]. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO, IPR009191 from INTERPRO, IPR009192 from INTERPRO for more details on the propanediol utilisation pathway and the pdu operon.; GO: 0005524 ATP binding, 0006576 cellular biogenic amine metabolic process
Probab=29.57 E-value=60 Score=24.63 Aligned_cols=46 Identities=24% Similarity=0.393 Sum_probs=28.6
Q ss_pred ccCeEEEeCCCCCCcccHHHHHHhCCCCCCceE------EEEEcCcEEEeeEE
Q 035494 7 IEPHLIVAKDGSGNFTTISEALAAVPQKYEGRF------VIFVATGIYEESVT 53 (181)
Q Consensus 7 ~~~~i~V~~~g~g~f~TIq~Ai~aa~~~~~~~~------tI~I~~G~Y~E~v~ 53 (181)
|+.-..|++.|.|. +||-.||..-.-.-.+.+ .+.=.||.|-|+=.
T Consensus 1 MkrimliG~~g~GK-TTL~q~L~~~~~~~~KTq~i~~~~~~IDTPGEyiE~~~ 52 (143)
T PF10662_consen 1 MKRIMLIGPSGSGK-TTLAQALNGEEIRYKKTQAIEYYDNTIDTPGEYIENPR 52 (143)
T ss_pred CceEEEECCCCCCH-HHHHHHHcCCCCCcCccceeEecccEEECChhheeCHH
Confidence 34567788887765 899999987443221211 22345888888633
No 119
>TIGR01965 VCBS_repeat VCBS repeat. This domain of about 100 residues is found multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion.
Probab=28.36 E-value=1.5e+02 Score=21.00 Aligned_cols=58 Identities=22% Similarity=0.386 Sum_probs=36.2
Q ss_pred eEEEeCCCCCCc--ccHHHHHHhCCCCC--CceEEEEEcCcEEEeeEEEeccccCEEEEecCCCceEEEee
Q 035494 10 HLIVAKDGSGNF--TTISEALAAVPQKY--EGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGR 76 (181)
Q Consensus 10 ~i~V~~~g~g~f--~TIq~Ai~aa~~~~--~~~~tI~I~~G~Y~E~v~I~~~~~~vtl~G~~~~~~~I~~~ 76 (181)
.+.+.++|.=.| ..-..|++++..++ ...+++.+..|+ ...| .|+|.|... .++|.+.
T Consensus 28 tlti~~~G~wtYtl~n~~~avq~L~~Ge~~tdsFtvtv~DGt-t~~v-------tItI~GtND-apvi~~~ 89 (99)
T TIGR01965 28 TFSIDADGQWTYQADNSQTAVQALKAGETLTDTFTVTSADGT-SQTV-------TITITGAND-AAVIGGA 89 (99)
T ss_pred EEEECCCCcEEEEeCCCcHHHHhhcCCCEEEEEEEEEEeCCC-eEEE-------EEEEEccCC-CCEEecc
Confidence 466666654333 23345899988885 457899999996 2222 367778754 4555544
No 120
>PF06186 DUF992: Protein of unknown function (DUF992); InterPro: IPR009333 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=28.11 E-value=63 Score=24.70 Aligned_cols=26 Identities=19% Similarity=0.376 Sum_probs=20.4
Q ss_pred eccEEecceeeEEccccEEEEeeEEEec
Q 035494 150 RSCLITGTVDFIFGDAATIFQNCQIMVR 177 (181)
Q Consensus 150 ~~c~I~G~vDfi~G~~~~~f~~c~i~~~ 177 (181)
-.|.+.+.+.||+|.... -.|+|+..
T Consensus 23 L~C~~~~~vg~vvgS~~~--l~C~F~~~ 48 (146)
T PF06186_consen 23 LTCRGGPGVGFVVGSSRE--LSCTFRPA 48 (146)
T ss_pred EEEeCCCceEEEEEEcce--eEEEEEcC
Confidence 369999999999998764 36777765
No 121
>PF05342 Peptidase_M26_N: M26 IgA1-specific Metallo-endopeptidase N-terminal region; InterPro: IPR008006 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases corresponds to MEROPS peptidase family M26 (clan MA(E)). The active site residues for members of this family and family M4 occur in the motif HEXXH. The type example is IgA1-specific metalloendopeptidase from Streptococcus sanguis (Q59986 from SWISSPROT).; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0016021 integral to membrane
Probab=26.20 E-value=72 Score=26.60 Aligned_cols=40 Identities=18% Similarity=0.327 Sum_probs=25.8
Q ss_pred CCEEEEEeEEEeCCCCCCCceEEEEEcC-CceEEEeeEEee
Q 035494 96 EGLFAKSMGFRNIAGPENGEAVAARVQS-DRATFHNCRFEG 135 (181)
Q Consensus 96 ~~~~~~nlti~N~~~~~~~qa~al~~~~-~~~~~~~c~~~g 135 (181)
.+-+++||+|+|..-....+..+|.-.+ ++..++|+++.|
T Consensus 210 ~gatI~nL~l~nv~I~~~d~va~LA~~ak~~t~IenV~v~G 250 (250)
T PF05342_consen 210 NGATIKNLNLKNVNINGPDDVAALANEAKNNTTIENVKVTG 250 (250)
T ss_pred cCCEEEcceeEEeeeeccccHHHHHHhhccCCEEEEEEecC
Confidence 4567778888776543333444455555 688899988765
No 122
>PF05772 NinB: NinB protein; InterPro: IPR008711 The ninR region of Bacteriophage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of Escherichia coli, respectively, operate on phage lambda []. Genetic recombination in phage lambda relies on DNA end processing by Exo to expose 3'-tailed strands for annealing and exchange by beta protein. Phage lambda encodes an additional recombinase, NinB (Orf), which participates in the early stages of recombination by supplying a function equivalent to the E. coli RecFOR complex. These host enzymes assist loading of the RecA strand exchange protein onto ssDNA coated with ssDNA-binding protein. NinB has two structural domains with unusual folds, and exists as an intertwined dimer [].; PDB: 1PC6_B.
Probab=23.81 E-value=64 Score=24.00 Aligned_cols=23 Identities=13% Similarity=0.254 Sum_probs=14.7
Q ss_pred cHHHHHHhCCCCCCceEEEEEcC
Q 035494 23 TISEALAAVPQKYEGRFVIFVAT 45 (181)
Q Consensus 23 TIq~Ai~aa~~~~~~~~tI~I~~ 45 (181)
+..++|.++|.+..+|.+|.|+|
T Consensus 10 ~a~~~I~~~p~d~~~p~~v~i~~ 32 (127)
T PF05772_consen 10 NAIQAIKQLPADDGKPLVVTIKP 32 (127)
T ss_dssp HHHHHHHT----SSS-EEEEEEE
T ss_pred HHHHHHHhcCcCCCCCEEEEeeC
Confidence 35667888888778999999998
No 123
>COG0848 ExbD Biopolymer transport protein [Intracellular trafficking and secretion]
Probab=21.09 E-value=1.3e+02 Score=22.47 Aligned_cols=12 Identities=33% Similarity=0.504 Sum_probs=6.2
Q ss_pred cccHHHHHHhCC
Q 035494 21 FTTISEALAAVP 32 (181)
Q Consensus 21 f~TIq~Ai~aa~ 32 (181)
...++++|.+..
T Consensus 81 ~~~l~~~l~~~~ 92 (137)
T COG0848 81 LEELEAALAALA 92 (137)
T ss_pred HHHHHHHHHHHh
Confidence 445555555543
No 124
>PF06865 DUF1255: Protein of unknown function (DUF1255); InterPro: IPR009664 This family consists of several conserved hypothetical bacterial proteins of around 95 residues in length. The function of this family is unknown; PDB: 2OYZ_A 3HQX_A.
Probab=20.93 E-value=1.4e+02 Score=21.09 Aligned_cols=30 Identities=20% Similarity=0.378 Sum_probs=15.5
Q ss_pred eEEE-EEcCcEEE------eeEEEeccccCEEEEecC
Q 035494 38 RFVI-FVATGIYE------ESVTVSKRMVNLTIIGEG 67 (181)
Q Consensus 38 ~~tI-~I~~G~Y~------E~v~I~~~~~~vtl~G~~ 67 (181)
+.|+ .+.||.|. |...|....-.|.|-|+.
T Consensus 24 ~~TlGVm~pGeY~F~T~~~E~M~vvsG~l~V~lpg~~ 60 (94)
T PF06865_consen 24 KKTLGVMLPGEYTFGTSAPERMEVVSGELEVKLPGED 60 (94)
T ss_dssp EEEEEEE-SECEEEEESS-EEEEEEESEEEEEETT-S
T ss_pred cceEEEEeeeEEEEcCCCCEEEEEEEeEEEEEcCCCc
Confidence 3444 56899998 666665532234444443
No 125
>PRK10579 hypothetical protein; Provisional
Probab=20.84 E-value=2.1e+02 Score=20.20 Aligned_cols=26 Identities=31% Similarity=0.454 Sum_probs=14.2
Q ss_pred EEcCcEEE------eeEEEeccccCEEEEecC
Q 035494 42 FVATGIYE------ESVTVSKRMVNLTIIGEG 67 (181)
Q Consensus 42 ~I~~G~Y~------E~v~I~~~~~~vtl~G~~ 67 (181)
.+.||.|. |...|-...-.|.|-|+.
T Consensus 29 Vm~pGey~F~T~~~E~MeivsG~l~V~Lpg~~ 60 (94)
T PRK10579 29 VMAEGEYTFSTAEPEEMTVISGALNVLLPGAT 60 (94)
T ss_pred EEeeeEEEEcCCCcEEEEEEeeEEEEECCCCc
Confidence 56789987 655554422234444443
No 126
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=20.56 E-value=1.4e+02 Score=17.47 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=18.4
Q ss_pred cHHHHHHhCCCCCCceEEEEEcCcE
Q 035494 23 TISEALAAVPQKYEGRFVIFVATGI 47 (181)
Q Consensus 23 TIq~Ai~aa~~~~~~~~tI~I~~G~ 47 (181)
-|.+||..+.-|+ ++|.|..|.
T Consensus 5 ~I~~~l~~i~yGs---V~iiiqdG~ 26 (38)
T PF10055_consen 5 KILEALKSIRYGS---VTIIIQDGR 26 (38)
T ss_pred HHHHHHhcCCcce---EEEEEECCE
Confidence 4788888888775 899999996
Done!