Query 035495
Match_columns 427
No_of_seqs 144 out of 1347
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 04:57:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035495.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035495hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.7E-63 9.4E-68 481.1 31.5 387 4-426 12-405 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.6E-57 5.6E-62 447.9 36.0 400 1-426 1-420 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.7E-56 6E-61 442.0 32.3 396 3-425 6-429 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.1E-54 3.8E-59 425.0 34.1 390 3-426 5-403 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 2.1E-54 7.3E-59 424.1 32.5 383 4-426 8-416 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 7.8E-43 2.7E-47 340.3 26.8 357 3-425 10-379 (424)
7 4amg_A Snogd; transferase, pol 100.0 6.5E-42 2.2E-46 331.1 22.8 330 4-426 21-363 (400)
8 1iir_A Glycosyltransferase GTF 100.0 7.9E-40 2.7E-44 318.0 25.6 343 6-425 1-359 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 2.4E-39 8.3E-44 314.7 20.6 336 6-414 1-352 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 1.1E-38 3.9E-43 308.5 18.9 336 6-425 1-342 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 1.5E-37 5.2E-42 302.0 24.9 335 3-414 18-363 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 9.8E-37 3.3E-41 294.9 28.7 340 5-414 4-348 (402)
13 2iyf_A OLED, oleandomycin glyc 100.0 1E-35 3.5E-40 290.5 27.4 339 4-414 6-349 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 3.8E-36 1.3E-40 294.4 19.2 336 4-414 19-385 (441)
15 2p6p_A Glycosyl transferase; X 100.0 4.7E-34 1.6E-38 274.5 24.9 313 6-414 1-329 (384)
16 3oti_A CALG3; calicheamicin, T 100.0 7.7E-33 2.6E-37 267.3 23.2 315 3-414 18-351 (398)
17 4fzr_A SSFS6; structural genom 100.0 1.2E-32 4E-37 266.1 21.5 321 3-414 13-350 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 4.4E-30 1.5E-34 247.4 22.9 317 5-414 1-336 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 2.8E-28 9.7E-33 236.4 25.5 327 3-414 18-358 (412)
20 3s2u_A UDP-N-acetylglucosamine 99.9 1.4E-25 4.9E-30 213.3 21.2 291 6-414 3-306 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 4E-24 1.4E-28 181.0 11.8 131 263-414 5-136 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 1E-17 3.5E-22 159.1 22.3 291 5-414 6-307 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 3.5E-14 1.2E-18 128.3 23.6 118 278-414 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 2.4E-15 8.4E-20 130.4 10.9 124 277-414 26-186 (224)
25 1v4v_A UDP-N-acetylglucosamine 98.9 1.6E-07 5.6E-12 88.9 20.7 114 278-413 197-318 (376)
26 3fro_A GLGA glycogen synthase; 98.9 3.7E-07 1.3E-11 88.1 23.3 64 344-415 310-380 (439)
27 3c48_A Predicted glycosyltrans 98.8 6.1E-07 2.1E-11 86.7 22.2 64 344-414 305-375 (438)
28 3okp_A GDP-mannose-dependent a 98.8 6.1E-07 2.1E-11 85.3 20.9 294 4-414 3-328 (394)
29 1vgv_A UDP-N-acetylglucosamine 98.7 3.7E-07 1.3E-11 86.7 17.8 116 278-414 204-327 (384)
30 2gek_A Phosphatidylinositol ma 98.7 1.4E-06 4.8E-11 83.2 21.6 65 344-415 262-334 (406)
31 3dzc_A UDP-N-acetylglucosamine 98.7 7.3E-07 2.5E-11 85.1 18.5 116 278-414 229-352 (396)
32 2iuy_A Avigt4, glycosyltransfe 98.7 1.9E-07 6.5E-12 87.2 13.7 111 282-414 164-293 (342)
33 3ot5_A UDP-N-acetylglucosamine 98.7 6E-07 2E-11 85.9 16.9 117 277-414 222-346 (403)
34 3beo_A UDP-N-acetylglucosamine 98.5 3.4E-06 1.1E-10 79.6 18.2 116 278-414 204-327 (375)
35 2r60_A Glycosyl transferase, g 98.5 4.1E-06 1.4E-10 82.5 17.6 65 344-415 334-409 (499)
36 2jjm_A Glycosyl transferase, g 98.4 0.00023 7.7E-09 67.5 27.5 302 4-414 14-334 (394)
37 2iw1_A Lipopolysaccharide core 98.3 1.4E-05 4.9E-10 75.2 16.0 112 280-413 196-319 (374)
38 4hwg_A UDP-N-acetylglucosamine 98.2 7.6E-05 2.6E-09 70.7 19.1 301 5-414 9-327 (385)
39 2x6q_A Trehalose-synthase TRET 98.2 0.00026 9.1E-09 67.6 23.3 63 344-413 292-364 (416)
40 1rzu_A Glycogen synthase 1; gl 98.0 0.001 3.5E-08 64.9 21.7 113 282-414 293-424 (485)
41 2vsy_A XCC0866; transferase, g 97.9 0.0053 1.8E-07 61.1 26.0 45 345-391 434-484 (568)
42 2hy7_A Glucuronosyltransferase 97.8 0.01 3.5E-07 56.4 24.7 58 344-414 264-336 (406)
43 2qzs_A Glycogen synthase; glyc 97.7 0.0047 1.6E-07 60.1 21.5 65 344-415 346-426 (485)
44 3s28_A Sucrose synthase 1; gly 97.6 0.00095 3.3E-08 68.9 15.2 65 344-415 639-715 (816)
45 2f9f_A First mannosyl transfer 97.2 0.0016 5.4E-08 54.1 9.7 113 282-412 25-145 (177)
46 2xci_A KDO-transferase, 3-deox 97.2 0.12 4E-06 48.4 23.3 65 346-412 261-330 (374)
47 3oy2_A Glycosyltransferase B73 97.2 0.064 2.2E-06 50.7 21.3 43 347-391 256-305 (413)
48 3tov_A Glycosyl transferase fa 96.9 0.028 9.5E-07 52.2 15.8 106 4-149 7-115 (349)
49 4gyw_A UDP-N-acetylglucosamine 96.9 0.004 1.4E-07 63.9 10.4 126 278-414 521-653 (723)
50 1psw_A ADP-heptose LPS heptosy 96.8 0.21 7.2E-06 45.9 20.9 46 6-51 1-47 (348)
51 3q3e_A HMW1C-like glycosyltran 96.4 0.0094 3.2E-07 58.9 9.1 101 280-391 441-549 (631)
52 3qhp_A Type 1 capsular polysac 95.6 0.06 2.1E-06 43.5 9.2 93 280-389 2-105 (166)
53 2bfw_A GLGA glycogen synthase; 94.3 0.47 1.6E-05 39.4 11.3 61 346-414 96-164 (200)
54 3rhz_A GTF3, nucleotide sugar 89.8 0.31 1.1E-05 44.8 4.8 65 344-414 214-290 (339)
55 3vue_A GBSS-I, granule-bound s 86.6 0.43 1.5E-05 46.9 3.8 46 344-391 381-433 (536)
56 2x0d_A WSAF; GT4 family, trans 84.6 0.58 2E-05 44.3 3.5 64 344-415 294-364 (413)
57 2x0d_A WSAF; GT4 family, trans 84.5 2.4 8.3E-05 39.9 7.8 41 3-44 44-89 (413)
58 3zqu_A Probable aromatic acid 83.5 1.6 5.6E-05 36.7 5.4 48 1-51 1-48 (209)
59 2wqk_A 5'-nucleotidase SURE; S 80.0 6.9 0.00023 33.9 8.2 44 5-51 1-44 (251)
60 3io3_A DEHA2D07832P; chaperone 79.4 6.8 0.00023 35.9 8.5 42 4-46 16-60 (348)
61 2gt1_A Lipopolysaccharide hept 79.0 5.4 0.00018 35.9 7.7 46 6-51 1-47 (326)
62 1ccw_A Protein (glutamate muta 78.9 2.9 9.8E-05 32.5 5.0 39 4-43 2-40 (137)
63 3iqw_A Tail-anchored protein t 76.3 9.2 0.00032 34.8 8.4 42 5-47 15-57 (334)
64 3fgn_A Dethiobiotin synthetase 76.3 37 0.0013 29.3 12.9 37 4-41 24-62 (251)
65 3vot_A L-amino acid ligase, BL 75.7 3.7 0.00013 38.7 5.8 37 1-43 1-37 (425)
66 3lqk_A Dipicolinate synthase s 75.6 3 0.0001 34.9 4.4 48 1-49 3-50 (201)
67 4dzz_A Plasmid partitioning pr 75.6 19 0.00064 29.5 9.7 39 7-46 3-42 (206)
68 1g5t_A COB(I)alamin adenosyltr 74.2 36 0.0012 28.1 11.3 39 5-44 28-66 (196)
69 1kjn_A MTH0777; hypotethical p 73.2 4.1 0.00014 31.8 4.3 46 6-52 7-54 (157)
70 2yxb_A Coenzyme B12-dependent 73.2 4 0.00014 32.7 4.5 40 4-44 17-56 (161)
71 1sbz_A Probable aromatic acid 71.7 4.7 0.00016 33.5 4.7 44 6-51 1-45 (197)
72 3qjg_A Epidermin biosynthesis 71.4 5.3 0.00018 32.5 4.9 44 6-51 6-49 (175)
73 1y80_A Predicted cobalamin bin 70.0 6.8 0.00023 32.9 5.5 44 4-48 87-130 (210)
74 3qxc_A Dethiobiotin synthetase 69.7 52 0.0018 28.1 11.2 36 5-41 20-57 (242)
75 3vue_A GBSS-I, granule-bound s 69.2 21 0.00071 34.8 9.5 36 4-42 8-51 (536)
76 3mcu_A Dipicolinate synthase, 68.2 5.6 0.00019 33.4 4.4 47 1-49 1-48 (207)
77 2ejb_A Probable aromatic acid 66.9 9.1 0.00031 31.6 5.5 44 6-51 2-45 (189)
78 2bw0_A 10-FTHFDH, 10-formyltet 65.3 29 0.00098 31.4 9.0 33 4-42 21-53 (329)
79 2i2x_B MTAC, methyltransferase 64.6 8.9 0.0003 33.4 5.3 39 4-43 122-160 (258)
80 1fmt_A Methionyl-tRNA FMet for 62.8 54 0.0019 29.3 10.2 35 3-43 1-35 (314)
81 1mvl_A PPC decarboxylase athal 62.3 10 0.00034 31.9 4.9 44 5-51 19-62 (209)
82 3ezx_A MMCP 1, monomethylamine 60.3 13 0.00043 31.4 5.3 43 4-47 91-133 (215)
83 2r8r_A Sensor protein; KDPD, P 60.3 13 0.00045 31.6 5.3 39 5-44 6-44 (228)
84 2qyt_A 2-dehydropantoate 2-red 58.7 4.3 0.00015 36.4 2.2 36 1-42 4-45 (317)
85 2gt1_A Lipopolysaccharide hept 58.6 9.4 0.00032 34.3 4.5 95 278-389 177-278 (326)
86 1id1_A Putative potassium chan 57.5 8.3 0.00028 30.2 3.5 34 4-43 2-35 (153)
87 3auf_A Glycinamide ribonucleot 57.3 44 0.0015 28.4 8.2 105 4-153 21-132 (229)
88 3igf_A ALL4481 protein; two-do 57.2 19 0.00065 33.2 6.3 40 6-47 2-42 (374)
89 1p3y_1 MRSD protein; flavoprot 56.5 7.6 0.00026 32.2 3.2 45 5-51 8-52 (194)
90 1g63_A Epidermin modifying enz 55.9 10 0.00034 31.0 3.8 44 6-51 3-46 (181)
91 4dim_A Phosphoribosylglycinami 55.7 43 0.0015 30.9 8.8 35 4-44 6-40 (403)
92 2iz6_A Molybdenum cofactor car 55.5 64 0.0022 26.0 8.5 45 347-392 91-140 (176)
93 3da8_A Probable 5'-phosphoribo 54.8 16 0.00055 30.8 5.0 109 3-153 10-120 (215)
94 2ywr_A Phosphoribosylglycinami 54.1 34 0.0012 28.7 6.9 103 6-153 2-111 (216)
95 1lss_A TRK system potassium up 53.7 10 0.00035 28.7 3.5 35 3-43 2-36 (140)
96 2g1u_A Hypothetical protein TM 53.0 18 0.00061 28.3 4.8 34 4-43 18-51 (155)
97 4b4o_A Epimerase family protei 52.1 12 0.0004 33.1 4.0 32 6-42 1-32 (298)
98 3ghy_A Ketopantoate reductase 51.3 13 0.00044 33.7 4.2 41 5-51 3-43 (335)
99 2q6t_A DNAB replication FORK h 51.3 25 0.00084 33.3 6.3 42 7-49 202-244 (444)
100 2hy5_B Intracellular sulfur ox 50.1 21 0.00071 27.6 4.6 43 1-44 1-46 (136)
101 3k96_A Glycerol-3-phosphate de 50.0 10 0.00034 34.9 3.2 37 1-43 25-61 (356)
102 3dfu_A Uncharacterized protein 49.8 12 0.0004 32.1 3.3 36 1-42 2-37 (232)
103 3hn2_A 2-dehydropantoate 2-red 49.7 26 0.00089 31.2 5.9 39 6-51 3-41 (312)
104 1f0y_A HCDH, L-3-hydroxyacyl-C 49.3 13 0.00044 33.0 3.8 37 1-43 11-47 (302)
105 2q5c_A NTRC family transcripti 49.0 24 0.00081 29.2 5.1 47 104-156 126-172 (196)
106 3av3_A Phosphoribosylglycinami 48.5 70 0.0024 26.6 8.0 104 5-153 3-113 (212)
107 3hwr_A 2-dehydropantoate 2-red 48.5 16 0.00054 32.8 4.2 42 4-51 18-59 (318)
108 3llv_A Exopolyphosphatase-rela 47.5 12 0.00041 28.7 2.9 34 4-43 5-38 (141)
109 3n7t_A Macrophage binding prot 47.5 38 0.0013 29.1 6.4 37 5-42 9-56 (247)
110 4g6h_A Rotenone-insensitive NA 46.3 14 0.00048 35.7 3.7 36 3-44 40-75 (502)
111 3i83_A 2-dehydropantoate 2-red 46.2 27 0.00092 31.3 5.4 39 6-51 3-41 (320)
112 2gk4_A Conserved hypothetical 45.1 10 0.00036 32.3 2.3 37 5-44 3-53 (232)
113 4hb9_A Similarities with proba 45.0 16 0.00055 33.6 3.9 30 5-40 1-30 (412)
114 3tov_A Glycosyl transferase fa 44.9 1.3E+02 0.0043 27.2 9.9 46 5-51 185-234 (349)
115 2wm1_A 2-amino-3-carboxymucona 44.4 21 0.00071 32.2 4.4 70 243-318 106-178 (336)
116 3zzm_A Bifunctional purine bio 44.0 33 0.0011 32.8 5.6 100 6-132 10-111 (523)
117 3kjh_A CO dehydrogenase/acetyl 43.2 21 0.0007 30.3 4.0 38 6-44 1-38 (254)
118 1u0t_A Inorganic polyphosphate 42.9 29 0.001 30.9 5.1 31 359-391 73-107 (307)
119 3tqr_A Phosphoribosylglycinami 42.4 48 0.0016 27.8 6.0 108 1-153 1-114 (215)
120 4egb_A DTDP-glucose 4,6-dehydr 42.3 1.8E+02 0.0061 25.7 10.6 34 3-41 22-57 (346)
121 1qzu_A Hypothetical protein MD 41.0 27 0.00092 29.1 4.2 48 3-51 17-64 (206)
122 3goc_A Endonuclease V; alpha-b 40.9 39 0.0013 28.7 5.1 42 106-151 94-142 (237)
123 3to5_A CHEY homolog; alpha(5)b 40.8 45 0.0015 25.4 5.2 31 123-153 57-96 (134)
124 1ydh_A AT5G11950; structural g 40.8 1.3E+02 0.0043 25.2 8.4 44 347-391 89-143 (216)
125 2ew2_A 2-dehydropantoate 2-red 40.4 21 0.00072 31.6 3.8 33 4-42 2-34 (316)
126 4gi5_A Quinone reductase; prot 40.1 41 0.0014 29.5 5.4 38 3-41 20-60 (280)
127 3eag_A UDP-N-acetylmuramate:L- 39.6 55 0.0019 29.3 6.5 43 4-51 3-48 (326)
128 2vou_A 2,6-dihydroxypyridine h 39.5 26 0.00088 32.4 4.3 35 1-41 1-35 (397)
129 3sbx_A Putative uncharacterize 39.4 90 0.0031 25.5 7.0 42 349-391 94-146 (189)
130 3ty2_A 5'-nucleotidase SURE; s 39.3 34 0.0012 29.7 4.6 46 3-51 9-54 (261)
131 3l4e_A Uncharacterized peptida 39.1 1E+02 0.0036 25.4 7.6 46 269-314 18-63 (206)
132 3s2u_A UDP-N-acetylglucosamine 39.1 42 0.0014 30.6 5.6 37 279-317 3-39 (365)
133 3mc3_A DSRE/DSRF-like family p 39.0 64 0.0022 24.5 5.9 39 6-45 16-57 (134)
134 3lyh_A Cobalamin (vitamin B12) 38.7 1.2E+02 0.004 22.5 8.1 102 279-404 6-115 (126)
135 1p9o_A Phosphopantothenoylcyst 38.6 23 0.00077 31.8 3.5 36 8-44 40-89 (313)
136 3gpi_A NAD-dependent epimerase 38.6 32 0.0011 29.9 4.6 32 5-42 3-34 (286)
137 2pju_A Propionate catabolism o 38.1 25 0.00086 29.8 3.6 43 104-152 138-180 (225)
138 1ydg_A Trp repressor binding p 38.0 41 0.0014 27.7 5.0 39 3-42 4-43 (211)
139 1wcv_1 SOJ, segregation protei 37.9 28 0.00097 29.8 4.1 45 1-46 1-47 (257)
140 3g0o_A 3-hydroxyisobutyrate de 37.7 22 0.00075 31.6 3.4 34 3-42 5-38 (303)
141 1psw_A ADP-heptose LPS heptosy 37.5 2.2E+02 0.0074 25.2 11.5 46 5-51 180-230 (348)
142 2c29_D Dihydroflavonol 4-reduc 37.1 23 0.00077 31.8 3.4 37 1-42 1-37 (337)
143 3of5_A Dethiobiotin synthetase 37.1 40 0.0014 28.5 4.8 37 4-41 2-40 (228)
144 2lpm_A Two-component response 37.0 22 0.00075 26.8 2.8 42 106-150 39-85 (123)
145 2yvq_A Carbamoyl-phosphate syn 36.9 66 0.0023 24.8 5.7 97 9-150 27-131 (143)
146 3bul_A Methionine synthase; tr 36.3 45 0.0015 32.7 5.5 42 4-46 97-138 (579)
147 4e5s_A MCCFLIKE protein (BA_56 36.3 54 0.0018 29.6 5.7 72 293-391 63-136 (331)
148 3ius_A Uncharacterized conserv 35.8 54 0.0018 28.3 5.7 34 5-44 5-38 (286)
149 1mio_A Nitrogenase molybdenum 35.4 3.1E+02 0.011 26.4 11.4 35 107-150 446-480 (533)
150 1pno_A NAD(P) transhydrogenase 35.3 43 0.0015 26.6 4.1 39 5-44 23-64 (180)
151 2w36_A Endonuclease V; hypoxan 35.3 47 0.0016 28.0 4.7 42 107-152 91-139 (225)
152 3sz8_A 2-dehydro-3-deoxyphosph 35.2 2.3E+02 0.0078 24.8 10.6 35 379-414 191-242 (285)
153 3ic5_A Putative saccharopine d 35.1 32 0.0011 24.8 3.5 34 4-43 4-38 (118)
154 3pdi_B Nitrogenase MOFE cofact 35.1 41 0.0014 32.0 4.9 33 109-150 367-399 (458)
155 3dhn_A NAD-dependent epimerase 35.1 40 0.0014 27.9 4.5 37 1-43 1-37 (227)
156 3pnx_A Putative sulfurtransfer 35.0 59 0.002 25.8 5.1 49 1-51 2-50 (160)
157 2fb6_A Conserved hypothetical 34.8 41 0.0014 25.1 3.9 43 1-45 4-50 (117)
158 3lrx_A Putative hydrogenase; a 34.7 31 0.001 27.2 3.5 35 6-44 24-58 (158)
159 1d4o_A NADP(H) transhydrogenas 34.7 45 0.0015 26.7 4.1 38 6-44 23-63 (184)
160 1kjq_A GART 2, phosphoribosylg 34.3 42 0.0014 30.8 4.9 38 1-44 7-44 (391)
161 1bg6_A N-(1-D-carboxylethyl)-L 34.1 31 0.0011 31.2 3.9 33 4-42 3-35 (359)
162 1jkx_A GART;, phosphoribosylgl 34.0 1.7E+02 0.0058 24.2 8.1 103 6-153 1-110 (212)
163 2r85_A PURP protein PF1517; AT 33.9 38 0.0013 30.2 4.4 34 5-45 2-35 (334)
164 2hbv_A 2-amino-3-carboxymucona 33.7 48 0.0017 29.6 5.1 73 242-318 109-181 (334)
165 2i2c_A Probable inorganic poly 33.5 20 0.00068 31.4 2.3 26 366-391 38-69 (272)
166 3qsg_A NAD-binding phosphogluc 33.4 25 0.00086 31.4 3.0 34 3-42 22-56 (312)
167 1jx7_A Hypothetical protein YC 33.0 45 0.0016 24.3 4.0 29 16-45 15-45 (117)
168 1rcu_A Conserved hypothetical 32.9 32 0.0011 28.4 3.3 33 358-391 115-150 (195)
169 3irs_A Uncharacterized protein 32.8 39 0.0013 29.7 4.2 63 292-381 135-201 (291)
170 2fsv_C NAD(P) transhydrogenase 32.7 48 0.0017 27.0 4.1 38 6-44 47-87 (203)
171 4hcj_A THIJ/PFPI domain protei 32.7 55 0.0019 26.3 4.8 42 1-44 4-45 (177)
172 1t35_A Hypothetical protein YV 32.3 1.4E+02 0.0046 24.4 7.1 43 348-391 82-135 (191)
173 3lyu_A Putative hydrogenase; t 32.1 39 0.0013 26.0 3.6 35 6-44 19-53 (142)
174 3kkl_A Probable chaperone prot 32.0 71 0.0024 27.3 5.5 38 5-43 3-51 (244)
175 3ga2_A Endonuclease V; alpha-b 31.9 51 0.0018 28.2 4.5 42 106-151 96-144 (246)
176 1yt5_A Inorganic polyphosphate 31.8 22 0.00075 30.8 2.3 29 361-391 41-72 (258)
177 1djl_A Transhydrogenase DIII; 31.7 51 0.0018 26.9 4.1 38 6-44 46-86 (207)
178 2an1_A Putative kinase; struct 31.6 29 0.00098 30.6 3.1 30 360-391 62-95 (292)
179 3doj_A AT3G25530, dehydrogenas 31.3 49 0.0017 29.4 4.6 34 3-42 19-52 (310)
180 3c24_A Putative oxidoreductase 31.3 46 0.0016 29.1 4.4 32 5-42 11-43 (286)
181 3obb_A Probable 3-hydroxyisobu 31.2 44 0.0015 29.6 4.2 31 5-41 3-33 (300)
182 1yb4_A Tartronic semialdehyde 31.1 47 0.0016 29.0 4.4 32 4-41 2-33 (295)
183 4dll_A 2-hydroxy-3-oxopropiona 31.1 56 0.0019 29.1 5.0 33 4-42 30-62 (320)
184 3ouz_A Biotin carboxylase; str 31.0 1.6E+02 0.0055 27.4 8.5 34 5-44 6-39 (446)
185 3fwz_A Inner membrane protein 30.8 29 0.001 26.5 2.7 34 5-44 7-40 (140)
186 4h1h_A LMO1638 protein; MCCF-l 30.8 73 0.0025 28.6 5.6 26 293-318 63-88 (327)
187 3mjf_A Phosphoribosylamine--gl 30.2 1.2E+02 0.0041 28.3 7.3 26 4-35 2-27 (431)
188 1ycd_A Hypothetical 27.3 kDa p 30.1 68 0.0023 26.6 5.2 42 1-43 1-45 (243)
189 1xrs_B D-lysine 5,6-aminomutas 29.8 39 0.0013 29.3 3.5 42 4-46 119-169 (262)
190 2dpo_A L-gulonate 3-dehydrogen 29.8 35 0.0012 30.6 3.3 37 1-43 1-38 (319)
191 3gl9_A Response regulator; bet 29.6 75 0.0026 22.9 4.8 31 123-153 46-85 (122)
192 3end_A Light-independent proto 29.2 60 0.002 28.6 4.8 39 5-44 41-79 (307)
193 3r5x_A D-alanine--D-alanine li 29.2 44 0.0015 29.4 3.9 47 4-51 2-52 (307)
194 3kcq_A Phosphoribosylglycinami 29.1 2.5E+02 0.0085 23.3 8.8 104 3-153 6-113 (215)
195 2x3n_A Probable FAD-dependent 29.0 33 0.0011 31.6 3.1 35 1-41 2-36 (399)
196 1qgu_B Protein (nitrogenase mo 28.9 3.8E+02 0.013 25.7 10.7 34 108-150 425-465 (519)
197 1z82_A Glycerol-3-phosphate de 28.7 44 0.0015 30.0 3.9 33 5-43 14-46 (335)
198 4g65_A TRK system potassium up 28.6 23 0.00078 33.8 2.0 34 4-43 2-35 (461)
199 2h78_A Hibadh, 3-hydroxyisobut 28.6 51 0.0017 29.0 4.2 33 4-42 2-34 (302)
200 2xj4_A MIPZ; replication, cell 28.6 61 0.0021 28.3 4.7 39 5-44 3-43 (286)
201 1ehi_A LMDDL2, D-alanine:D-lac 28.4 53 0.0018 30.1 4.4 38 4-42 2-44 (377)
202 2bru_C NAD(P) transhydrogenase 28.2 51 0.0017 26.3 3.5 39 6-45 31-72 (186)
203 1g8m_A Aicar transformylase-IM 28.0 71 0.0024 31.0 5.1 44 1-51 1-44 (593)
204 3cky_A 2-hydroxymethyl glutara 27.8 64 0.0022 28.2 4.7 35 1-42 1-35 (301)
205 2pn1_A Carbamoylphosphate synt 27.6 73 0.0025 28.3 5.2 34 3-43 2-37 (331)
206 2hmt_A YUAA protein; RCK, KTN, 27.4 34 0.0012 25.8 2.5 33 5-43 6-38 (144)
207 2xvy_A Chelatase, putative; me 27.3 1.3E+02 0.0044 25.9 6.5 39 279-317 10-50 (269)
208 1vhq_A Enhancing lycopene bios 27.2 1.2E+02 0.0041 25.4 6.2 41 1-43 1-47 (232)
209 1e2b_A Enzyme IIB-cellobiose; 27.2 1.1E+02 0.0036 22.2 5.0 37 4-41 2-38 (106)
210 2l2q_A PTS system, cellobiose- 27.2 82 0.0028 22.9 4.5 37 4-41 3-39 (109)
211 2vo1_A CTP synthase 1; pyrimid 27.2 64 0.0022 28.1 4.2 41 4-45 21-64 (295)
212 2zki_A 199AA long hypothetical 27.2 60 0.0021 26.3 4.2 39 1-42 1-40 (199)
213 3ug7_A Arsenical pump-driving 27.0 78 0.0027 28.6 5.2 41 4-45 24-65 (349)
214 1ks9_A KPA reductase;, 2-dehyd 26.9 54 0.0018 28.4 4.1 31 6-42 1-31 (291)
215 3q0i_A Methionyl-tRNA formyltr 26.7 1E+02 0.0034 27.6 5.7 34 4-43 6-39 (318)
216 3sr3_A Microcin immunity prote 26.6 92 0.0031 28.1 5.5 72 293-391 64-137 (336)
217 2raf_A Putative dinucleotide-b 26.6 60 0.002 26.8 4.1 32 5-42 19-50 (209)
218 2a5l_A Trp repressor binding p 26.5 81 0.0028 25.4 4.9 38 4-42 4-42 (200)
219 2qs7_A Uncharacterized protein 26.4 1.1E+02 0.0037 23.6 5.2 41 10-51 13-53 (144)
220 2q62_A ARSH; alpha/beta, flavo 26.4 82 0.0028 26.9 5.0 38 3-41 32-72 (247)
221 3ew7_A LMO0794 protein; Q8Y8U8 26.4 57 0.002 26.7 4.0 32 7-43 2-33 (221)
222 3f6r_A Flavodoxin; FMN binding 26.2 94 0.0032 23.6 5.0 38 6-44 2-40 (148)
223 2d1p_A TUSD, hypothetical UPF0 26.1 97 0.0033 23.8 4.9 37 5-42 12-52 (140)
224 1cp2_A CP2, nitrogenase iron p 26.1 63 0.0022 27.6 4.3 36 7-43 3-38 (269)
225 2r6j_A Eugenol synthase 1; phe 26.1 56 0.0019 28.8 4.1 32 7-43 13-44 (318)
226 1zl0_A Hypothetical protein PA 26.1 1.1E+02 0.0038 27.2 5.9 74 292-392 64-139 (311)
227 4ezb_A Uncharacterized conserv 26.0 39 0.0013 30.2 3.0 33 5-43 24-57 (317)
228 2rdm_A Response regulator rece 25.9 1.3E+02 0.0044 21.7 5.7 37 1-42 1-37 (132)
229 4dgk_A Phytoene dehydrogenase; 25.8 31 0.0011 32.9 2.4 29 6-40 2-30 (501)
230 1pzg_A LDH, lactate dehydrogen 25.7 43 0.0015 30.2 3.2 38 1-44 5-43 (331)
231 3nrc_A Enoyl-[acyl-carrier-pro 25.7 1.1E+02 0.0038 26.4 5.9 41 6-50 26-68 (280)
232 2an1_A Putative kinase; struct 25.5 64 0.0022 28.3 4.3 39 1-40 1-40 (292)
233 3qrx_B Melittin; calcium-bindi 25.4 15 0.00052 18.6 0.1 17 372-388 1-17 (26)
234 2hy5_A Putative sulfurtransfer 25.4 1.1E+02 0.0038 22.9 5.1 25 17-42 15-40 (130)
235 3lk7_A UDP-N-acetylmuramoylala 25.4 1.4E+02 0.0048 28.0 6.9 33 4-42 8-40 (451)
236 4e5v_A Putative THUA-like prot 25.3 87 0.003 27.4 5.0 39 3-43 2-43 (281)
237 1qyd_A Pinoresinol-lariciresin 25.1 62 0.0021 28.3 4.2 34 5-43 4-37 (313)
238 3qjg_A Epidermin biosynthesis 25.0 2.6E+02 0.009 22.3 9.6 117 280-414 7-146 (175)
239 1xgk_A Nitrogen metabolite rep 24.8 50 0.0017 29.9 3.5 38 1-43 1-38 (352)
240 3g79_A NDP-N-acetyl-D-galactos 24.8 81 0.0028 30.1 5.0 35 4-44 17-53 (478)
241 2zbw_A Thioredoxin reductase; 24.6 47 0.0016 29.5 3.3 37 1-43 1-37 (335)
242 1dhr_A Dihydropteridine reduct 24.6 76 0.0026 26.6 4.5 33 6-42 7-39 (241)
243 3c1o_A Eugenol synthase; pheny 24.5 53 0.0018 29.0 3.6 35 4-43 3-37 (321)
244 3h2s_A Putative NADH-flavin re 24.5 65 0.0022 26.4 4.0 32 7-43 2-33 (224)
245 3dm5_A SRP54, signal recogniti 24.4 88 0.003 29.5 5.1 41 6-47 101-141 (443)
246 1gsa_A Glutathione synthetase; 24.3 66 0.0023 28.1 4.2 37 6-43 2-41 (316)
247 4gbj_A 6-phosphogluconate dehy 24.3 72 0.0025 28.1 4.4 30 6-41 6-35 (297)
248 4ehi_A Bifunctional purine bio 23.8 98 0.0033 29.7 5.2 39 6-51 25-63 (534)
249 3t6k_A Response regulator rece 23.8 1.2E+02 0.0041 22.3 5.1 31 123-153 48-87 (136)
250 2ehd_A Oxidoreductase, oxidore 23.8 64 0.0022 26.8 3.8 33 7-43 6-38 (234)
251 4huj_A Uncharacterized protein 23.7 30 0.001 29.0 1.6 32 4-41 22-53 (220)
252 3zq6_A Putative arsenical pump 23.7 91 0.0031 27.8 5.0 38 6-44 14-52 (324)
253 1o97_C Electron transferring f 23.7 1.1E+02 0.0037 26.5 5.3 39 109-153 104-148 (264)
254 3s40_A Diacylglycerol kinase; 23.3 2.8E+02 0.0095 24.3 8.1 26 366-391 66-97 (304)
255 2qv7_A Diacylglycerol kinase D 23.2 1.8E+02 0.006 26.0 6.9 26 366-391 83-114 (337)
256 3qua_A Putative uncharacterize 23.0 1.7E+02 0.0059 24.0 6.1 44 347-391 101-155 (199)
257 3gi1_A LBP, laminin-binding pr 23.0 3.7E+02 0.013 23.3 9.3 30 123-152 228-259 (286)
258 1xjc_A MOBB protein homolog; s 23.0 1.4E+02 0.0046 23.8 5.3 39 6-45 5-43 (169)
259 2c5a_A GDP-mannose-3', 5'-epim 22.8 83 0.0028 28.6 4.6 34 4-42 28-61 (379)
260 3rkr_A Short chain oxidoreduct 22.7 1.1E+02 0.0039 25.9 5.3 34 6-43 29-62 (262)
261 1rw7_A YDR533CP; alpha-beta sa 22.6 1.5E+02 0.0052 25.0 6.0 38 5-43 3-51 (243)
262 3m6m_D Sensory/regulatory prot 22.6 98 0.0034 23.1 4.4 31 123-153 58-99 (143)
263 3l4b_C TRKA K+ channel protien 22.5 37 0.0013 28.2 1.9 32 6-43 1-32 (218)
264 2afh_E Nitrogenase iron protei 22.5 83 0.0028 27.3 4.4 38 6-44 3-40 (289)
265 3pef_A 6-phosphogluconate dehy 22.4 81 0.0028 27.4 4.3 32 6-43 2-33 (287)
266 1hdo_A Biliverdin IX beta redu 22.4 92 0.0031 24.9 4.5 32 6-42 4-35 (206)
267 1byi_A Dethiobiotin synthase; 22.3 89 0.0031 25.7 4.4 33 7-40 3-36 (224)
268 2dzd_A Pyruvate carboxylase; b 22.3 69 0.0023 30.2 4.0 38 1-44 1-39 (461)
269 3qha_A Putative oxidoreductase 22.3 51 0.0017 29.0 3.0 32 5-42 15-46 (296)
270 3czc_A RMPB; alpha/beta sandwi 22.3 1E+02 0.0035 22.4 4.2 37 4-41 17-55 (110)
271 3nur_A Amidohydrolase; TIM bar 22.3 2.1E+02 0.0073 25.8 7.2 73 243-318 124-196 (357)
272 3f6p_A Transcriptional regulat 21.9 1.4E+02 0.005 21.1 5.1 31 123-153 46-82 (120)
273 3s40_A Diacylglycerol kinase; 21.8 1.3E+02 0.0044 26.5 5.5 43 1-44 3-49 (304)
274 1u0t_A Inorganic polyphosphate 21.7 87 0.003 27.7 4.4 37 5-42 4-41 (307)
275 2phj_A 5'-nucleotidase SURE; S 21.7 98 0.0034 26.6 4.4 43 6-51 2-44 (251)
276 3ea0_A ATPase, para family; al 21.7 81 0.0028 26.3 4.1 40 5-45 3-45 (245)
277 3slg_A PBGP3 protein; structur 21.6 63 0.0021 29.2 3.5 35 4-43 23-58 (372)
278 2uyy_A N-PAC protein; long-cha 21.5 78 0.0027 28.0 4.1 32 5-42 30-61 (316)
279 1oi4_A Hypothetical protein YH 21.4 2E+02 0.0069 23.1 6.3 39 4-44 22-60 (193)
280 3tsa_A SPNG, NDP-rhamnosyltran 21.4 1.8E+02 0.006 26.2 6.7 29 361-391 114-143 (391)
281 3nb0_A Glycogen [starch] synth 21.4 68 0.0023 32.2 3.8 43 347-391 495-550 (725)
282 3bfv_A CAPA1, CAPB2, membrane 21.4 97 0.0033 26.8 4.5 41 5-46 81-123 (271)
283 3u7q_A Nitrogenase molybdenum- 21.4 64 0.0022 30.9 3.6 34 108-150 408-441 (492)
284 1txg_A Glycerol-3-phosphate de 21.3 76 0.0026 28.2 4.0 31 6-42 1-31 (335)
285 1qyc_A Phenylcoumaran benzylic 21.2 83 0.0028 27.4 4.2 33 5-43 4-37 (308)
286 3nbm_A PTS system, lactose-spe 21.0 1.2E+02 0.0042 22.1 4.3 38 3-41 4-41 (108)
287 3pdu_A 3-hydroxyisobutyrate de 21.0 71 0.0024 27.8 3.6 32 6-43 2-33 (287)
288 2bon_A Lipid kinase; DAG kinas 20.9 2.3E+02 0.0078 25.2 7.1 78 281-391 33-118 (332)
289 4fu0_A D-alanine--D-alanine li 20.9 65 0.0022 29.2 3.4 37 4-41 2-42 (357)
290 1sby_A Alcohol dehydrogenase; 20.9 2E+02 0.0068 24.1 6.5 39 1-44 1-40 (254)
291 1y56_B Sarcosine oxidase; dehy 20.8 61 0.0021 29.4 3.3 34 4-43 4-37 (382)
292 1i36_A Conserved hypothetical 20.8 76 0.0026 27.1 3.7 30 6-41 1-30 (264)
293 3rfo_A Methionyl-tRNA formyltr 20.8 1.2E+02 0.0041 27.1 5.1 35 4-44 3-37 (317)
294 3q9l_A Septum site-determining 20.8 96 0.0033 26.2 4.4 37 7-44 3-41 (260)
295 3dqp_A Oxidoreductase YLBE; al 20.7 74 0.0025 26.1 3.6 32 7-43 2-33 (219)
296 3ruf_A WBGU; rossmann fold, UD 20.7 61 0.0021 29.0 3.2 34 4-42 24-57 (351)
297 4eg0_A D-alanine--D-alanine li 20.7 1E+02 0.0036 27.1 4.7 39 4-43 12-54 (317)
298 3f67_A Putative dienelactone h 20.7 1.3E+02 0.0043 24.5 5.1 36 6-42 32-67 (241)
299 2f62_A Nucleoside 2-deoxyribos 20.6 1.6E+02 0.0054 23.3 5.2 35 356-390 62-105 (161)
300 1efv_B Electron transfer flavo 20.5 1.5E+02 0.005 25.5 5.4 30 124-153 117-152 (255)
301 2c20_A UDP-glucose 4-epimerase 20.5 80 0.0028 27.8 4.0 32 6-42 2-33 (330)
302 1e4e_A Vancomycin/teicoplanin 20.5 70 0.0024 28.7 3.6 38 4-42 2-43 (343)
303 3l6d_A Putative oxidoreductase 20.5 59 0.002 28.8 3.0 33 4-42 8-40 (306)
304 2x5n_A SPRPN10, 26S proteasome 20.4 1.4E+02 0.0049 24.2 5.1 34 8-42 110-143 (192)
305 3hww_A 2-succinyl-5-enolpyruvy 20.4 80 0.0027 30.7 4.2 27 364-390 72-104 (556)
306 1vdc_A NTR, NADPH dependent th 20.3 37 0.0013 30.1 1.6 32 5-42 8-39 (333)
307 2a33_A Hypothetical protein; s 20.2 2.9E+02 0.0098 23.0 7.0 80 296-389 57-145 (215)
308 1jay_A Coenzyme F420H2:NADP+ o 20.2 88 0.003 25.5 3.9 31 6-42 1-32 (212)
309 2xdo_A TETX2 protein; tetracyc 20.2 84 0.0029 28.8 4.1 33 4-42 25-57 (398)
310 3dtt_A NADP oxidoreductase; st 20.0 94 0.0032 26.3 4.1 33 4-42 18-50 (245)
311 2woj_A ATPase GET3; tail-ancho 20.0 1.1E+02 0.0036 27.8 4.7 39 6-45 18-59 (354)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.7e-63 Score=481.07 Aligned_cols=387 Identities=26% Similarity=0.391 Sum_probs=305.4
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCC--CEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTG--FKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLP 81 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~G--h~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 81 (427)
+++||+++|+|++||++|++.||+.|++ +| +.|||++++.+...+.+.... .. ++++|+.+| ++++
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~-~g~~~~vT~~~t~~~~~~~~~~~~~-~~-----~~i~~~~ip-----dglp 79 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIAT-EAPKVTFSFFCTTTTNDTLFSRSNE-FL-----PNIKYYNVH-----DGLP 79 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHSCSSSSC-CC-----TTEEEEECC-----CCCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHh-CCCCEEEEEEeCHHHHHhhhccccc-CC-----CCceEEecC-----CCCC
Confidence 4689999999999999999999999999 99 999999998766665443211 12 579999887 5787
Q ss_pred CCCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEEecchHHHHHHH
Q 035495 82 PNTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTFATGGAYVTLAY 161 (427)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 161 (427)
++.+...+ +...+..+.... .+.+++.++++..+.+.++||||+|.++.|+..+|+++|||++.|++++++.+..+
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~ 155 (454)
T 3hbf_A 80 KGYVSSGN-PREPIFLFIKAM---QENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTH 155 (454)
T ss_dssp TTCCCCSC-TTHHHHHHHHHH---HHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHH
T ss_pred CCccccCC-hHHHHHHHHHHH---HHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHH
Confidence 76655443 322333444433 34455555554322235699999999999999999999999999999999998887
Q ss_pred HhhhhcCCCC----CCCCCCC-CCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCccccChhH
Q 035495 162 TSMWLNLPQK----KTNSDEF-TLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAEDIEPGA 236 (427)
Q Consensus 162 ~~~~~~~p~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 236 (427)
++.+...... ....... .+|+++. ++.++++.++.. .....+.+++.+..+....++++++||+++||+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~ 231 (454)
T 3hbf_A 156 VYTDLIREKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLI 231 (454)
T ss_dssp HTHHHHHHTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHH
T ss_pred HhhHHHHhhcCCCccccccccccCCCCCC---cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHH
Confidence 7654321110 1111223 3888886 888888877654 34445667777777788889999999999999999
Q ss_pred HHHHHhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEc
Q 035495 237 LQWLRNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEASAKSFLWVIT 316 (427)
Q Consensus 237 ~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~ 316 (427)
++++++.+ +++++|||++..........+.++.+||+.+++++||||||||+...+.+++.+++.++++++++|||+++
T Consensus 232 ~~~~~~~~-~~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~ 310 (454)
T 3hbf_A 232 ENELNSKF-KLLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFR 310 (454)
T ss_dssp HHHHHTTS-SCEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECC
T ss_pred HHHHHhcC-CCEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Confidence 99999876 79999999986531122234678999999988899999999999998999999999999999999999998
Q ss_pred CCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCcEEeccCcccch
Q 035495 317 PPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPIAAEQT 396 (427)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~ 396 (427)
... ...+|+++.++.. .|+++.+|+||.++|+|++|++|||||||||++||+++|||+|++|++.||+
T Consensus 311 ~~~---------~~~lp~~~~~~~~---~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~ 378 (454)
T 3hbf_A 311 GDP---------KEKLPKGFLERTK---TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQG 378 (454)
T ss_dssp SCH---------HHHSCTTHHHHTT---TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred Ccc---------hhcCCHhHHhhcC---CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHH
Confidence 751 2347777766544 4677779999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhceeEEEecCCCccccccccc
Q 035495 397 YNSKMLVEEMGVAVEMTRGVQSTIVGHEVK 426 (427)
Q Consensus 397 ~na~~v~~~lG~G~~l~~~~~~~~~~~~i~ 426 (427)
.||+++++.||+|+.++. +.+++|+|+
T Consensus 379 ~Na~~v~~~~g~Gv~l~~---~~~~~~~l~ 405 (454)
T 3hbf_A 379 LNTILTESVLEIGVGVDN---GVLTKESIK 405 (454)
T ss_dssp HHHHHHHTTSCSEEECGG---GSCCHHHHH
T ss_pred HHHHHHHHhhCeeEEecC---CCCCHHHHH
Confidence 999999985599999986 567777654
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.6e-57 Score=447.86 Aligned_cols=400 Identities=30% Similarity=0.477 Sum_probs=288.6
Q ss_pred CC-CCCcEEEEeCCCCccCHHHHHHHHHHHHhcC-CCEEEEEeCCc--chHHhhhhhcCCCCCCCCCCceeEEEcCCCCC
Q 035495 1 MG-SENEHIGMLPLMAHGHLIPFLALAKQIHRST-GFKITIANTPL--NIQYLQNTISSANPNSPEKFNINLVELPFCSS 76 (427)
Q Consensus 1 m~-~~~~~il~~~~p~~GH~~P~l~La~~L~~~~-Gh~Vt~~~~~~--~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~ 76 (427)
|+ .+++||+++|+|++||++|+++||++|++ | ||+|||++++. +...+++... ... .+++|+.++...
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~-r~Gh~Vt~~t~~~~~~~~~~~~~~~-~~~-----~~i~~~~l~~~~- 72 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVH-LHGLTVTFVIAGEGPPSKAQRTVLD-SLP-----SSISSVFLPPVD- 72 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHH-HHCCEEEEEECCSSSCC-CHHHHHC--CC-----TTEEEEECCCCC-
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHh-CCCCEEEEEECCCcchhhhhhhhcc-ccC-----CCceEEEcCCCC-
Confidence 65 45689999999999999999999999999 9 99999999887 4455554221 111 579999887431
Q ss_pred CCCCCCCCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCC-cEEEecCCcchHHHHHHHhCCceEEEecchH
Q 035495 77 DHGLPPNTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPP-ICIITDTFFGWAVDVAKSAGSTNVTFATGGA 155 (427)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~ 155 (427)
++.. .... .....+........+.++++++++.. ..++ ||||+|.+..|+..+|+++|||++.++++++
T Consensus 73 ---~~~~-~~~~----~~~~~~~~~~~~~~~~l~~ll~~~~~--~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~ 142 (480)
T 2vch_A 73 ---LTDL-SSST----RIESRISLTVTRSNPELRKVFDSFVE--GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTA 142 (480)
T ss_dssp ---CTTS-CTTC----CHHHHHHHHHHTTHHHHHHHHHHHHH--TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCH
T ss_pred ---CCCC-CCch----hHHHHHHHHHHhhhHHHHHHHHHhcc--CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccH
Confidence 1111 1111 11233445556777888888888631 2357 9999999999999999999999999999998
Q ss_pred HHHHHHHhhhh---cCCCCCC-CCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCccc
Q 035495 156 YVTLAYTSMWL---NLPQKKT-NSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAED 231 (427)
Q Consensus 156 ~~~~~~~~~~~---~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 231 (427)
.....+.+.+. ....... ......+|+++. +...+++..+. .+.....+.+.......+.+.++++|++.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~nt~~e 217 (480)
T 2vch_A 143 NVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQ--DRKDDAYKWLLHNTKRYKEAEGILVNTFFE 217 (480)
T ss_dssp HHHHHHHHHHHHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGS--CTTSHHHHHHHHHHHHGGGCSEEEESCCTT
T ss_pred HHHHHHHHHHHHHhcCCCcccccCCcccCCCCCC---CChHHCchhhh--cCCchHHHHHHHHHHhcccCCEEEEcCHHH
Confidence 77666554331 1110000 011234556554 55555554432 111223344444445566677889999999
Q ss_pred cChhHHHHHHhcC--CCCEEEeCccCCCCCCC-CCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhCC
Q 035495 232 IEPGALQWLRNYI--KLPVWAIGPLLPQSYLK-KSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEASA 308 (427)
Q Consensus 232 l~~~~~~~~~~~~--~~~~~~vGp~~~~~~~~-~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~ 308 (427)
|+++++..+.+.. .+++++|||++...... ....+.++.+||+.++++++|||||||+...+.++++++++++++++
T Consensus 218 le~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~ 297 (480)
T 2vch_A 218 LEPNAIKALQEPGLDKPPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSE 297 (480)
T ss_dssp TSHHHHHHHHSCCTTCCCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTT
T ss_pred HhHHHHHHHHhcccCCCcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcC
Confidence 9998888776521 26899999998754110 02356789999999888899999999999888999999999999999
Q ss_pred CcEEEEEcCCCCCCcch------hhh-ccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHh
Q 035495 309 KSFLWVITPPVGFDLRA------EFR-SEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLS 381 (427)
Q Consensus 309 ~~~i~~~~~~~~~~~~~------~~~-~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~ 381 (427)
++|||+++.....+..+ +.+ ...+|+++.++++ ..++++.+|+||.+||+|++|++||||||+||++||++
T Consensus 298 ~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~ 375 (480)
T 2vch_A 298 QRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTK--KRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVV 375 (480)
T ss_dssp CEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTT--TTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHH
T ss_pred CcEEEEECCccccccccccccccccchhhhcCHHHHHHhC--CCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHH
Confidence 99999998752100000 001 1358888888887 78888877999999999999999999999999999999
Q ss_pred cCCcEEeccCcccchhhHHHH-HhhhceeEEEecCCCccccccccc
Q 035495 382 QGLPTIGWPIAAEQTYNSKML-VEEMGVAVEMTRGVQSTIVGHEVK 426 (427)
Q Consensus 382 ~GvP~v~~P~~~DQ~~na~~v-~~~lG~G~~l~~~~~~~~~~~~i~ 426 (427)
+|||||++|++.||+.||+++ ++ +|+|+.++.++++.+++|+|+
T Consensus 376 ~GvP~i~~P~~~DQ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~ 420 (480)
T 2vch_A 376 SGIPLIAWPLYAEQKMNAVLLSED-IRAALRPRAGDDGLVRREEVA 420 (480)
T ss_dssp HTCCEEECCCSTTHHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHH
T ss_pred cCCCEEeccccccchHHHHHHHHH-hCeEEEeecccCCccCHHHHH
Confidence 999999999999999999997 67 799999987555578887764
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.7e-56 Score=441.98 Aligned_cols=396 Identities=26% Similarity=0.504 Sum_probs=283.7
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCC
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPP 82 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 82 (427)
++++||+++|+|++||++|++.||++|++ |||+|||++++.+...+.+....... .+.++++|+.++ ++++.
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~-rG~~VT~v~t~~~~~~~~~~~~~~~~--~~~~~i~~~~l~-----~~lp~ 77 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHL-RGFHITFVNTEYNHKRLLKSRGPKAF--DGFTDFNFESIP-----DGLTP 77 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEEEHHHHHHHC--------------CEEEEEEC-----CCCC-
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHh-CCCeEEEEeCCchhhhhccccccccc--cCCCceEEEECC-----CCCCC
Confidence 44689999999999999999999999999 99999999998877766553110000 000379999887 24544
Q ss_pred CCCCCccchhhHHHHHHHHh-cCCcHHHHHHHHhhhhhc-CCCCcEEEecCCcchHHHHHHHhCCceEEEecchHHHHHH
Q 035495 83 NTENTENLSLDLIINFFTSS-QSPKTPLYNLLMDIKEKA-GKPPICIITDTFFGWAVDVAKSAGSTNVTFATGGAYVTLA 160 (427)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~-~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 160 (427)
...... .. ..+..++..+ ..+.+.+++++++++... +.++||||+|.+..|+..+|+++|||++.++++++.....
T Consensus 78 ~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 155 (482)
T 2pq6_A 78 MEGDGD-VS-QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLN 155 (482)
T ss_dssp ----------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHH
T ss_pred cccccC-cc-hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHH
Confidence 110000 01 1123344444 677788888988875210 2469999999999999999999999999999998876655
Q ss_pred HHhhh-----hcCCCCCCC--C----CC--CCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEc
Q 035495 161 YTSMW-----LNLPQKKTN--S----DE--FTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCN 227 (427)
Q Consensus 161 ~~~~~-----~~~p~~~~~--~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 227 (427)
+.+.+ .+.|..... . +. ..+|+++. ++..+++.+.........+.+++....+....++++++|
T Consensus 156 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~n 232 (482)
T 2pq6_A 156 VMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLN 232 (482)
T ss_dssp HTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEES
T ss_pred HHHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEc
Confidence 43322 234432110 0 11 12445543 555556555433222334445555555666778899999
Q ss_pred CccccChhHHHHHHhcCCCCEEEeCccCCC-CCC-----------CCCCCchhhhhhccCCCCCeEEEEecCCcccCCHH
Q 035495 228 TAEDIEPGALQWLRNYIKLPVWAIGPLLPQ-SYL-----------KKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSS 295 (427)
Q Consensus 228 ~~~~l~~~~~~~~~~~~~~~~~~vGp~~~~-~~~-----------~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~ 295 (427)
++++||+++++++++.+ +++++|||++.. ... ...+.+.++.+||+.++++++|||||||+...+.+
T Consensus 233 t~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~ 311 (482)
T 2pq6_A 233 TFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPE 311 (482)
T ss_dssp SCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHH
T ss_pred ChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHH
Confidence 99999999999999887 899999999863 110 00123456899999988889999999999888888
Q ss_pred HHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhh
Q 035495 296 QMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNS 375 (427)
Q Consensus 296 ~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s 375 (427)
++.++++++++++++|||+++..... + ....+|+++.++. +.|+++.+|+||.++|+|+++++||||||+||
T Consensus 312 ~~~~~~~~l~~~~~~~l~~~~~~~~~----~-~~~~l~~~~~~~~---~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s 383 (482)
T 2pq6_A 312 QLLEFAWGLANCKKSFLWIIRPDLVI----G-GSVIFSSEFTNEI---ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNS 383 (482)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGST----T-TGGGSCHHHHHHH---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHH
T ss_pred HHHHHHHHHHhcCCcEEEEEcCCccc----c-ccccCcHhHHHhc---CCCEEEEeecCHHHHhcCCCCCEEEecCCcch
Confidence 89999999999999999999854100 0 0123677776554 45788889999999999999999999999999
Q ss_pred HHHHHhcCCcEEeccCcccchhhHHHHH-hhhceeEEEecCCCcccccccc
Q 035495 376 VLESLSQGLPTIGWPIAAEQTYNSKMLV-EEMGVAVEMTRGVQSTIVGHEV 425 (427)
Q Consensus 376 ~~eal~~GvP~v~~P~~~DQ~~na~~v~-~~lG~G~~l~~~~~~~~~~~~i 425 (427)
++||+++|||+|++|++.||+.||++++ + +|+|+.++. .+++|+|
T Consensus 384 ~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~-~G~g~~l~~----~~~~~~l 429 (482)
T 2pq6_A 384 TTESICAGVPMLCWPFFADQPTDCRFICNE-WEIGMEIDT----NVKREEL 429 (482)
T ss_dssp HHHHHHHTCCEEECCCSTTHHHHHHHHHHT-SCCEEECCS----SCCHHHH
T ss_pred HHHHHHcCCCEEecCcccchHHHHHHHHHH-hCEEEEECC----CCCHHHH
Confidence 9999999999999999999999999997 7 699999973 3555554
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.1e-54 Score=425.04 Aligned_cols=390 Identities=22% Similarity=0.376 Sum_probs=276.6
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCC--EEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCC
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGF--KITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGL 80 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh--~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 80 (427)
++++||+++|+|++||++|+++||++|++ ||| .||+++++.+...+.+...+... .+++|+.++ +++
T Consensus 5 ~~~~hvv~~p~p~~GHi~P~l~la~~L~~-rGh~v~vt~~~t~~~~~~~~~~~~~~~~-----~~i~~~~i~-----~gl 73 (456)
T 2c1x_A 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAA-AAPHAVFSFFSTSQSNASIFHDSMHTMQ-----CNIKSYDIS-----DGV 73 (456)
T ss_dssp --CCEEEEECCCSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHHC-------C-----TTEEEEECC-----CCC
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHh-CCCCeEEEEEeCchhHHHhhccccccCC-----CceEEEeCC-----CCC
Confidence 45789999999999999999999999999 865 56888887655444332111111 579999876 355
Q ss_pred CCCCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEEecchHHHHHH
Q 035495 81 PPNTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTFATGGAYVTLA 160 (427)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 160 (427)
+++.+... .....+..+.... .+.+.++++++....+.++||||+|.++.|+..+|+++|||++.++++++..+..
T Consensus 74 p~~~~~~~-~~~~~~~~~~~~~---~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 149 (456)
T 2c1x_A 74 PEGYVFAG-RPQEDIELFTRAA---PESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLST 149 (456)
T ss_dssp CTTCCCCC-CTTHHHHHHHHHH---HHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHH
T ss_pred CCcccccC-ChHHHHHHHHHHh---HHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHH
Confidence 55432211 1222223333332 3445555554332213469999999999999999999999999999998876655
Q ss_pred HHhhhh-----cCCCC-CCCCCC-CCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCccccC
Q 035495 161 YTSMWL-----NLPQK-KTNSDE-FTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAEDIE 233 (427)
Q Consensus 161 ~~~~~~-----~~p~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 233 (427)
+.+... ..+.. ...... ..+|+++. ++.++++..+........+.+++.+.......++++++|++++||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le 226 (456)
T 2c1x_A 150 HVYIDEIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELD 226 (456)
T ss_dssp HHTHHHHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGC
T ss_pred HhhhHHHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHh
Confidence 432211 11110 111111 24667665 566666653322112223334445555555678899999999999
Q ss_pred hhHHHHHHhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEE
Q 035495 234 PGALQWLRNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEASAKSFLW 313 (427)
Q Consensus 234 ~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~ 313 (427)
+++++.+++.+ +++++|||++..........+.++.+|++.++++++|||||||......+++.++++++++++++|||
T Consensus 227 ~~~~~~~~~~~-~~~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw 305 (456)
T 2c1x_A 227 DSLTNDLKSKL-KTYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIW 305 (456)
T ss_dssp HHHHHHHHHHS-SCEEECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHhcC-CCEEEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEE
Confidence 99999998887 79999999986531111122356899999888889999999999988889999999999999999999
Q ss_pred EEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCcEEeccCcc
Q 035495 314 VITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPIAA 393 (427)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~~ 393 (427)
+++... ...+|+++.++. +.|+.+.+|+||.++|+|+++++||||||+||++||+++|||+|++|++.
T Consensus 306 ~~~~~~---------~~~l~~~~~~~~---~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~ 373 (456)
T 2c1x_A 306 SLRDKA---------RVHLPEGFLEKT---RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFG 373 (456)
T ss_dssp ECCGGG---------GGGSCTTHHHHH---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred EECCcc---------hhhCCHHHHhhc---CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChh
Confidence 998641 224677765543 45788889999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHhhhceeEEEecCCCccccccccc
Q 035495 394 EQTYNSKMLVEEMGVAVEMTRGVQSTIVGHEVK 426 (427)
Q Consensus 394 DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~i~ 426 (427)
||+.||+++++.||+|+.++. +.+++|+|+
T Consensus 374 dQ~~Na~~l~~~~g~g~~l~~---~~~~~~~l~ 403 (456)
T 2c1x_A 374 DQRLNGRMVEDVLEIGVRIEG---GVFTKSGLM 403 (456)
T ss_dssp THHHHHHHHHHTSCCEEECGG---GSCCHHHHH
T ss_pred hHHHHHHHHHHHhCeEEEecC---CCcCHHHHH
Confidence 999999999994499999976 556766654
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=2.1e-54 Score=424.10 Aligned_cols=383 Identities=27% Similarity=0.431 Sum_probs=283.4
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcC--CCEEEEEeCCcch-----HHhhhhhcCCCCCCCCCCceeEEEcCCCCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRST--GFKITIANTPLNI-----QYLQNTISSANPNSPEKFNINLVELPFCSS 76 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~--Gh~Vt~~~~~~~~-----~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~ 76 (427)
+++||+++|+|++||++|++.||++|++ | ||+|||++++.+. ..+.+.. ... .+++|+.+|..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~-r~pG~~Vt~v~t~~~~~~~~~~~~~~~~--~~~-----~~i~~~~lp~~-- 77 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTN-HDKNLYITVFCIKFPGMPFADSYIKSVL--ASQ-----PQIQLIDLPEV-- 77 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHH-TCTTEEEEEEECCCTTCCCCHHHHHHHH--CSC-----TTEEEEECCCC--
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHh-cCCCcEEEEEEcCCcchhhhhhhhhhcc--cCC-----CCceEEECCCC--
Confidence 4689999999999999999999999999 9 9999999988752 3333311 112 57999988842
Q ss_pred CCCCCCCCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEEecchHH
Q 035495 77 DHGLPPNTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTFATGGAY 156 (427)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 156 (427)
.++. .+.... ... . +...+....+.++++++++. +.++||||+|.++.|+..+|+++|||++.++++++.
T Consensus 78 --~~~~-~~~~~~--~~~-~-~~~~~~~~~~~~~~ll~~~~---~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~ 147 (463)
T 2acv_A 78 --EPPP-QELLKS--PEF-Y-ILTFLESLIPHVKATIKTIL---SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVG 147 (463)
T ss_dssp --CCCC-GGGGGS--HHH-H-HHHHHHHTHHHHHHHHHHHC---CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHH
T ss_pred --CCCc-ccccCC--ccH-H-HHHHHHhhhHHHHHHHHhcc---CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHH
Confidence 1222 110111 111 1 44555666778888888751 245999999999999999999999999999999988
Q ss_pred HHHHHHhhhhcC-CCCCCCCC----CCCCCCC-CCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCcc
Q 035495 157 VTLAYTSMWLNL-PQKKTNSD----EFTLPGF-PERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAE 230 (427)
Q Consensus 157 ~~~~~~~~~~~~-p~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 230 (427)
.+..+.+.+... .......+ ...+|++ +. +...+++..+... ....+.+.......+.++++++||++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ 221 (463)
T 2acv_A 148 FLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFS 221 (463)
T ss_dssp HHHHHHHGGGSCTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCH
T ss_pred HHHHHHHHHhhcccCCCCCccccCceeECCCCCCC---CChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHH
Confidence 776665544321 00000111 2345666 44 5555665544322 22444444445556677889999999
Q ss_pred ccChhHHHHHHhcC--CCCEEEeCccCCCCC-CCCC---CCchhhhhhccCCCCCeEEEEecCCcc-cCCHHHHHHHHHH
Q 035495 231 DIEPGALQWLRNYI--KLPVWAIGPLLPQSY-LKKS---KNPEKIIEWLDLHDPASVLHISFGSQN-TISSSQMMELDIG 303 (427)
Q Consensus 231 ~l~~~~~~~~~~~~--~~~~~~vGp~~~~~~-~~~~---~~~~~l~~~l~~~~~~~vV~vs~Gs~~-~~~~~~~~~~~~a 303 (427)
+||+++.+.+.+.. ++++++|||++.... .... ..+.++.+||+.++++++|||||||+. ..+.+++.+++++
T Consensus 222 ele~~~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~ 301 (463)
T 2acv_A 222 DLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALG 301 (463)
T ss_dssp HHHHHHHHHHHHHCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHH
T ss_pred HHhHHHHHHHHhccccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHH
Confidence 99999888887755 689999999986531 0001 235689999999888999999999999 7888899999999
Q ss_pred HHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHh--ccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHh
Q 035495 304 LEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERI--KEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLS 381 (427)
Q Consensus 304 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~ 381 (427)
+++++++|||+++.+ .+.+|+++.++. . . |+++.+|+||.++|+|+++++||||||+||++||++
T Consensus 302 l~~~~~~~l~~~~~~----------~~~l~~~~~~~~~~~--~-~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~ 368 (463)
T 2acv_A 302 LKHSGVRFLWSNSAE----------KKVFPEGFLEWMELE--G-KGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMW 368 (463)
T ss_dssp HHHHTCEEEEECCCC----------GGGSCTTHHHHHHHH--C-SEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHH
T ss_pred HHhCCCcEEEEECCC----------cccCChhHHHhhccC--C-CEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHH
Confidence 999999999999863 013667776654 4 3 566778999999999999999999999999999999
Q ss_pred cCCcEEeccCcccchhhHHHH-HhhhceeEEE-ecCCCc--cccccccc
Q 035495 382 QGLPTIGWPIAAEQTYNSKML-VEEMGVAVEM-TRGVQS--TIVGHEVK 426 (427)
Q Consensus 382 ~GvP~v~~P~~~DQ~~na~~v-~~~lG~G~~l-~~~~~~--~~~~~~i~ 426 (427)
+|||+|++|++.||+.||+++ ++ +|+|+.+ +..+++ .+++|+|+
T Consensus 369 ~GvP~i~~P~~~dQ~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~ 416 (463)
T 2acv_A 369 FGVPILTWPIYAEQQLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIE 416 (463)
T ss_dssp TTCCEEECCCSTTHHHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHH
T ss_pred cCCCeeeccchhhhHHHHHHHHHH-cCeEEEEecccCCCCccccHHHHH
Confidence 999999999999999999995 78 6999999 322223 67777654
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=7.8e-43 Score=340.26 Aligned_cols=357 Identities=19% Similarity=0.212 Sum_probs=233.6
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCC
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPP 82 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 82 (427)
++++||+|++++++||++|+++||++|++ +||+|+|++++.+.+.+++ .+++|++++. .++.
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~-~Gh~V~~~~~~~~~~~~~~------------~g~~~~~~~~-----~~~~ 71 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVA-RGHRVSYAITDEFAAQVKA------------AGATPVVYDS-----ILPK 71 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH------------HTCEEEECCC-----CSCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHH-CCCeEEEEeCHHHHHHHHh------------CCCEEEecCc-----cccc
Confidence 35689999999999999999999999999 9999999999999888887 5688887763 2222
Q ss_pred CCCC---CccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEEecchHHHHH
Q 035495 83 NTEN---TENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTFATGGAYVTL 159 (427)
Q Consensus 83 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 159 (427)
.... ........+..+......+.+.+.+++++ .+||+||+|.+..++..+|+++|||++.+++.+.....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~ 145 (424)
T 2iya_A 72 ESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYAD------DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEG 145 (424)
T ss_dssp TTCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT------SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTT
T ss_pred cccchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccc
Confidence 2111 01111111122222222333444444443 34999999998889999999999999999876541100
Q ss_pred HHHhhhhcCCCCCCCCCCCCCC-CC--CCCccc--ch-----hccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCc
Q 035495 160 AYTSMWLNLPQKKTNSDEFTLP-GF--PERCHF--HI-----TQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTA 229 (427)
Q Consensus 160 ~~~~~~~~~p~~~~~~~~~~~~-~~--~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 229 (427)
....+....+...........| +. ...... .. ..+..++...+..... .......+.++++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-------~~~~~~~~~~l~~~~ 218 (424)
T 2iya_A 146 FEEDVPAVQDPTADRGEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPA-------TEFLIAPNRCIVALP 218 (424)
T ss_dssp HHHHSGGGSCCCC---------------------HHHHHHHHHHHHHHHHHTTCCSCH-------HHHHHCCSSEEESSC
T ss_pred cccccccccccccccccccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCH-------HHhccCCCcEEEEcc
Confidence 0000000000000000000000 00 000000 00 0111111111111000 011113467899999
Q ss_pred cccChhHHHHHHhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhCCC
Q 035495 230 EDIEPGALQWLRNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEASAK 309 (427)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~ 309 (427)
+.++++ ...+++++++|||++... ....+|++..+++++|||++||......+.+..+++++++.+.
T Consensus 219 ~~l~~~-----~~~~~~~~~~vGp~~~~~--------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~ 285 (424)
T 2iya_A 219 RTFQIK-----GDTVGDNYTFVGPTYGDR--------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDW 285 (424)
T ss_dssp TTTSTT-----GGGCCTTEEECCCCCCCC--------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSS
T ss_pred hhhCCC-----ccCCCCCEEEeCCCCCCc--------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCc
Confidence 888864 356778999999987542 1234688766678899999999986667889999999999899
Q ss_pred cEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCcEEec
Q 035495 310 SFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGW 389 (427)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~ 389 (427)
+++|.++... + .+.+ ...+.|+.+.+|+||.++|+|++ +||||||+||++||+++|||+|++
T Consensus 286 ~~~~~~g~~~------~------~~~~----~~~~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~ 347 (424)
T 2iya_A 286 HVVLSVGRFV------D------PADL----GEVPPNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAV 347 (424)
T ss_dssp EEEEECCTTS------C------GGGG----CSCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEEC
T ss_pred EEEEEECCcC------C------hHHh----ccCCCCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCEEEe
Confidence 9999988642 0 0111 00167899999999999999999 899999999999999999999999
Q ss_pred cCcccchhhHHHHHhhhceeEEEecCCCcccccccc
Q 035495 390 PIAAEQTYNSKMLVEEMGVAVEMTRGVQSTIVGHEV 425 (427)
Q Consensus 390 P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~i 425 (427)
|...||..||+++++ +|+|+.++. +.+++++|
T Consensus 348 p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l 379 (424)
T 2iya_A 348 PQIAEQTMNAERIVE-LGLGRHIPR---DQVTAEKL 379 (424)
T ss_dssp CCSHHHHHHHHHHHH-TTSEEECCG---GGCCHHHH
T ss_pred cCccchHHHHHHHHH-CCCEEEcCc---CCCCHHHH
Confidence 999999999999999 599999986 34455444
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=6.5e-42 Score=331.14 Aligned_cols=330 Identities=14% Similarity=0.152 Sum_probs=207.0
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCC--CC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHG--LP 81 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~ 81 (427)
++|||||+++|+.||++|+++||++|++ |||+|||++++.+++.++ .++.+..+........ .+
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~-rGh~Vt~~t~~~~~~~~~-------------~g~~~~~~~~~~~~~~~~~~ 86 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRA-LGHEVRYATGGDIRAVAE-------------AGLCAVDVSPGVNYAKLFVP 86 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEECSSTHHHHT-------------TTCEEEESSTTCCSHHHHSC
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHH-CCCEEEEEeCcchhhHHh-------------cCCeeEecCCchhHhhhccc
Confidence 4799999999999999999999999999 999999999988776443 4466665542211000 00
Q ss_pred CCCCC------CccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEEecchH
Q 035495 82 PNTEN------TENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTFATGGA 155 (427)
Q Consensus 82 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~ 155 (427)
..... ...........+..........+.+++++++ ||+||+|.+.+++..+|+.+|||++.+...+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~ 160 (400)
T 4amg_A 87 DDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWR------PDLVVHTPTQGAGPLTAAALQLPCVELPLGPA 160 (400)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC------CSEEEECTTCTHHHHHHHHTTCCEEECCSSTT
T ss_pred cccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCEEEECcchHHHHHHHHHcCCCceeeccccc
Confidence 00000 0000000111122222333445556666665 99999999999999999999999998765433
Q ss_pred HHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhccc-ccceEEEcCccccCh
Q 035495 156 YVTLAYTSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSF-ESYGMLCNTAEDIEP 234 (427)
Q Consensus 156 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~l~~ 234 (427)
......... ..+.+... ......... .....+....
T Consensus 161 ~~~~~~~~~-------------------------~~~~l~~~-------------~~~~~~~~~~~~~~~~~~~~----- 197 (400)
T 4amg_A 161 DSEPGLGAL-------------------------IRRAMSKD-------------YERHGVTGEPTGSVRLTTTP----- 197 (400)
T ss_dssp TCCHHHHHH-------------------------HHHHTHHH-------------HHHTTCCCCCSCEEEEECCC-----
T ss_pred ccccchhhH-------------------------HHHHHHHH-------------HHHhCCCcccccchhhcccC-----
Confidence 211110000 00000000 000000000 1111111111
Q ss_pred hHHHHH--HhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCC--HHHHHHHHHHHHhCCCc
Q 035495 235 GALQWL--RNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTIS--SSQMMELDIGLEASAKS 310 (427)
Q Consensus 235 ~~~~~~--~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~--~~~~~~~~~a~~~~~~~ 310 (427)
+..... .....+.....++.... ....+.+|++..+++++|||||||+.... .+.+.++++++++.+.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~ 270 (400)
T 4amg_A 198 PSVEALLPEDRRSPGAWPMRYVPYN-------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAE 270 (400)
T ss_dssp HHHHHTSCGGGCCTTCEECCCCCCC-------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSE
T ss_pred chhhccCcccccCCcccCccccccc-------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCce
Confidence 111100 01111222333332222 23445578988888999999999987644 36788899999999999
Q ss_pred EEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCcEEecc
Q 035495 311 FLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWP 390 (427)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P 390 (427)
++|..+... .... .. .+.|+.+.+|+||.++|+|++ +||||||+||++||+++|||+|++|
T Consensus 271 ~v~~~~~~~---------~~~~-~~-------~~~~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~v~~P 331 (400)
T 4amg_A 271 FVLTLGGGD---------LALL-GE-------LPANVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQCVIP 331 (400)
T ss_dssp EEEECCTTC---------CCCC-CC-------CCTTEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECC
T ss_pred EEEEecCcc---------cccc-cc-------CCCCEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCEEEec
Confidence 999987652 0011 11 167999999999999999999 8999999999999999999999999
Q ss_pred CcccchhhHHHHHhhhceeEEEecCCCccccccccc
Q 035495 391 IAAEQTYNSKMLVEEMGVAVEMTRGVQSTIVGHEVK 426 (427)
Q Consensus 391 ~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~i~ 426 (427)
++.||+.||+++++ +|+|+.++. +..++|+|+
T Consensus 332 ~~~dQ~~na~~v~~-~G~g~~l~~---~~~~~~al~ 363 (400)
T 4amg_A 332 HGSYQDTNRDVLTG-LGIGFDAEA---GSLGAEQCR 363 (400)
T ss_dssp C---CHHHHHHHHH-HTSEEECCT---TTCSHHHHH
T ss_pred CcccHHHHHHHHHH-CCCEEEcCC---CCchHHHHH
Confidence 99999999999999 599999987 555666553
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.9e-40 Score=317.97 Aligned_cols=343 Identities=13% Similarity=0.112 Sum_probs=222.4
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCCCCC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPPNTE 85 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 85 (427)
|||+|+++++.||++|+++||++|++ +||+|+|++++...+.+.+ .+++|+.++... .+.+. ..
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~------------~g~~~~~i~~~~-~~~~~-~~- 64 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRD-LGADVRMCAPPDCAERLAE------------VGVPHVPVGPSA-RAPIQ-RA- 64 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH------------TTCCEEECCC---------CC-
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHH-CCCeEEEEcCHHHHHHHHH------------cCCeeeeCCCCH-HHHhh-cc-
Confidence 58999999999999999999999999 9999999999988887877 678999887431 01111 10
Q ss_pred CCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecC-Ccch--HHHHHHHhCCceEEEecchHHHHHHHH
Q 035495 86 NTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDT-FFGW--AVDVAKSAGSTNVTFATGGAYVTLAYT 162 (427)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~ 162 (427)
..... ..+..+ +. ......++++... ..+||+||+|. +..+ +..+|+++|||++.+++++...
T Consensus 65 -~~~~~-~~~~~~---~~---~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~----- 130 (415)
T 1iir_A 65 -KPLTA-EDVRRF---TT---EAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYV----- 130 (415)
T ss_dssp -SCCCH-HHHHHH---HH---HHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGS-----
T ss_pred -cccch-HHHHHH---HH---HHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcC-----
Confidence 00111 011111 11 1122333333211 24599999997 6778 8999999999999998876421
Q ss_pred hhhhcCCCCCCCCCCCCCCCC-CCCc-ccc-hhcc---------chhhhhcCCCCchhhhhhhhhhcccccceEEEcCcc
Q 035495 163 SMWLNLPQKKTNSDEFTLPGF-PERC-HFH-ITQL---------HKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAE 230 (427)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~-~~~~-~~~-~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 230 (427)
+..+.|..... ..+++. ..+. ... .... .......+.. .. ....+..... .+++++++
T Consensus 131 -~~~~~p~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~----~~~~~~~~~~-~~l~~~~~ 200 (415)
T 1iir_A 131 -PSPYYPPPPLG---EPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLP-PV----EDIFTFGYTD-HPWVAADP 200 (415)
T ss_dssp -CCSSSCCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CC----CCHHHHHHCS-SCEECSCT
T ss_pred -CCcccCCccCC---ccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCC-CC----CccccccCCC-CEEEeeCh
Confidence 11112211100 111110 0000 000 0000 0000000000 00 0000111122 57899998
Q ss_pred ccCh-hHHHHHHhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhCCC
Q 035495 231 DIEP-GALQWLRNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEASAK 309 (427)
Q Consensus 231 ~l~~-~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~ 309 (427)
.+++ + +..+ ++++|||+.... ....+.++.+|++.. +++|||++||+. ...+.++.+++++++.+.
T Consensus 201 ~l~~~~-----~~~~--~~~~vG~~~~~~---~~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~ 267 (415)
T 1iir_A 201 VLAPLQ-----PTDL--DAVQTGAWILPD---ERPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGR 267 (415)
T ss_dssp TTSCCC-----CCSS--CCEECCCCCCCC---CCCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTC
T ss_pred hhcCCC-----cccC--CeEeeCCCccCc---ccCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCC
Confidence 8875 3 2333 799999998764 234678899999765 478999999997 567788889999999999
Q ss_pred cEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCcEEec
Q 035495 310 SFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGW 389 (427)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~ 389 (427)
+++|+++... . .. .. . +.|+.+.+|+||.++|++++ +||||||+||++||+++|||+|++
T Consensus 268 ~~v~~~g~~~-------~---~~-~~-----~--~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~ 327 (415)
T 1iir_A 268 RVILSRGWAD-------L---VL-PD-----D--GADCFAIGEVNHQVLFGRVA--AVIHHGGAGTTHVAARAGAPQILL 327 (415)
T ss_dssp CEEECTTCTT-------C---CC-SS-----C--GGGEEECSSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEEC
T ss_pred eEEEEeCCCc-------c---cc-cC-----C--CCCEEEeCcCChHHHHhhCC--EEEeCCChhHHHHHHHcCCCEEEC
Confidence 9999988652 0 01 11 1 56899999999999998888 899999999999999999999999
Q ss_pred cCcccchhhHHHHHhhhceeEEEecCCCcccccccc
Q 035495 390 PIAAEQTYNSKMLVEEMGVAVEMTRGVQSTIVGHEV 425 (427)
Q Consensus 390 P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~i 425 (427)
|...||..||+++++ +|+|+.++. ..++.++|
T Consensus 328 p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l 359 (415)
T 1iir_A 328 PQMADQPYYAGRVAE-LGVGVAHDG---PIPTFDSL 359 (415)
T ss_dssp CCSTTHHHHHHHHHH-HTSEEECSS---SSCCHHHH
T ss_pred CCCCccHHHHHHHHH-CCCcccCCc---CCCCHHHH
Confidence 999999999999999 599999986 33444443
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.4e-39 Score=314.71 Aligned_cols=336 Identities=12% Similarity=0.101 Sum_probs=222.7
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCCCCC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPPNTE 85 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 85 (427)
|||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.+++ .|++|+.++... .+.+...
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~------------~g~~~~~~~~~~-~~~~~~~-- 64 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKA-LGVQTRMCAPPAAEERLAE------------VGVPHVPVGLPQ-HMMLQEG-- 64 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH------------HTCCEEECSCCG-GGCCCTT--
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH------------cCCeeeecCCCH-HHHHhhc--
Confidence 58999999999999999999999999 9999999999988888887 668898877431 0111110
Q ss_pred CCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecC-Ccch--HHHHHHHhCCceEEEecchHHHHHHHH
Q 035495 86 NTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDT-FFGW--AVDVAKSAGSTNVTFATGGAYVTLAYT 162 (427)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~ 162 (427)
...... ..+..+.. .....+++.+... ..+||+||+|. +.++ +..+|+++|||++.+.+++...
T Consensus 65 ~~~~~~-~~~~~~~~------~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~----- 131 (416)
T 1rrv_A 65 MPPPPP-EEEQRLAA------MTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL----- 131 (416)
T ss_dssp SCCCCH-HHHHHHHH------HHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS-----
T ss_pred cccchh-HHHHHHHH------HHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC-----
Confidence 001111 01111111 1123333333211 24599999996 4556 8899999999999988775321
Q ss_pred hhhhcCCCCCCCCCCCCC-CCCCCCccc-c-hhcc---------chhhhhcCCCCchhhhhhhhhhcccccceEEEcCcc
Q 035495 163 SMWLNLPQKKTNSDEFTL-PGFPERCHF-H-ITQL---------HKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAE 230 (427)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~-~~~~~~~~~-~-~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 230 (427)
+..+.| ... . +.+ +++..+... . ...+ ..+....... .. ....+..... .+++++.+
T Consensus 132 -~~~~~p-~~~--~-~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~----~~~~~~~~~~-~~l~~~~~ 200 (416)
T 1rrv_A 132 -ASPHLP-PAY--D-EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLP-PV----EDVFGYGHGE-RPLLAADP 200 (416)
T ss_dssp -CCSSSC-CCB--C-SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CC----SCHHHHTTCS-SCEECSCT
T ss_pred -CCcccC-CCC--C-CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCC-CC----CchhhhccCC-CeEEccCc
Confidence 111111 000 0 111 121110000 0 0000 0000000000 00 0011112233 67899998
Q ss_pred ccChhHHHHHHhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCccc-CCHHHHHHHHHHHHhCCC
Q 035495 231 DIEPGALQWLRNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNT-ISSSQMMELDIGLEASAK 309 (427)
Q Consensus 231 ~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~-~~~~~~~~~~~a~~~~~~ 309 (427)
+++++ +..+ ++++|||+..+. ....+.++.+|++.. +++|||++||+.. ...+.++.+++++++.+.
T Consensus 201 ~l~~~-----~~~~--~~~~vG~~~~~~---~~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~ 268 (416)
T 1rrv_A 201 VLAPL-----QPDV--DAVQTGAWLLSD---ERPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGR 268 (416)
T ss_dssp TTSCC-----CSSC--CCEECCCCCCCC---CCCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTC
T ss_pred cccCC-----CCCC--CeeeECCCccCc---cCCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCC
Confidence 88754 2222 789999998764 234578899999765 4789999999864 345678889999999999
Q ss_pred cEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCcEEec
Q 035495 310 SFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGW 389 (427)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~ 389 (427)
+++|+++... . . . .. . +.|+.+.+|+||.++|++++ +||||||+||++||+++|||+|++
T Consensus 269 ~~v~~~g~~~-------~--~-~-~~-----~--~~~v~~~~~~~~~~ll~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~ 328 (416)
T 1rrv_A 269 RVILSRGWTE-------L--V-L-PD-----D--RDDCFAIDEVNFQALFRRVA--AVIHHGSAGTEHVATRAGVPQLVI 328 (416)
T ss_dssp CEEEECTTTT-------C--C-C-SC-----C--CTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEEC
T ss_pred eEEEEeCCcc-------c--c-c-cC-----C--CCCEEEeccCChHHHhccCC--EEEecCChhHHHHHHHcCCCEEEc
Confidence 9999988652 0 0 1 11 1 66899999999999998888 899999999999999999999999
Q ss_pred cCcccchhhHHHHHhhhceeEEEec
Q 035495 390 PIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 390 P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
|...||..||+++++ +|+|+.++.
T Consensus 329 p~~~dQ~~na~~l~~-~g~g~~~~~ 352 (416)
T 1rrv_A 329 PRNTDQPYFAGRVAA-LGIGVAHDG 352 (416)
T ss_dssp CCSBTHHHHHHHHHH-HTSEEECSS
T ss_pred cCCCCcHHHHHHHHH-CCCccCCCC
Confidence 999999999999999 599999986
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.1e-38 Score=308.46 Aligned_cols=336 Identities=11% Similarity=0.049 Sum_probs=220.2
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCCC-C
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPPN-T 84 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~ 84 (427)
|||+|++.++.||++|+++||++|++ +||+|++++++.+.+.+++ .++.|..++.+.. .+... .
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~-~Gh~V~v~~~~~~~~~v~~------------~g~~~~~l~~~~~--~~~~~~~ 65 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRE-LGADARMCLPPDYVERCAE------------VGVPMVPVGRAVR--AGAREPG 65 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHH-TTCCEEEEECGGGHHHHHH------------TTCCEEECSSCSS--GGGSCTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH------------cCCceeecCCCHH--HHhcccc
Confidence 58999999999999999999999999 9999999999999999988 6788998774311 11000 0
Q ss_pred CCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcchH---HHHHHHhCCceEEEecchHHHHHHH
Q 035495 85 ENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFGWA---VDVAKSAGSTNVTFATGGAYVTLAY 161 (427)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~ 161 (427)
....... ..+...+......+.+++ .+||+||+|.....+ ..+|+++|||++.+..++......+
T Consensus 66 ~~~~~~~----~~~~~~~~~~~~~l~~~~--------~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~ 133 (404)
T 3h4t_A 66 ELPPGAA----EVVTEVVAEWFDKVPAAI--------EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQ 133 (404)
T ss_dssp CCCTTCG----GGHHHHHHHHHHHHHHHH--------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGS
T ss_pred CCHHHHH----HHHHHHHHHHHHHHHHHh--------cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChh
Confidence 0000000 111111111111222211 139999999654544 7899999999999887764210000
Q ss_pred HhhhhcCCCCCCCCCCCCCCCCCCCccc-ch-hccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCccccChhHHHH
Q 035495 162 TSMWLNLPQKKTNSDEFTLPGFPERCHF-HI-TQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAEDIEPGALQW 239 (427)
Q Consensus 162 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 239 (427)
..... +....... .. ..+..+...... .......... ..+..+.+..+.+.+.
T Consensus 134 ~~~~~---------------~~~~~~~~~~~~~~~~~~~~~lgl-~~~~~~~~~~-----~~~~~l~~~~~~l~p~---- 188 (404)
T 3h4t_A 134 SQAER---------------DMYNQGADRLFGDAVNSHRASIGL-PPVEHLYDYG-----YTDQPWLAADPVLSPL---- 188 (404)
T ss_dssp CHHHH---------------HHHHHHHHHHHHHHHHHHHHHTTC-CCCCCHHHHH-----HCSSCEECSCTTTSCC----
T ss_pred HHHHH---------------HHHHHHHHHHhHHHHHHHHHHcCC-CCCcchhhcc-----ccCCeEEeeCcceeCC----
Confidence 00000 00000000 00 000001111100 0000000000 0112345555556543
Q ss_pred HHhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 035495 240 LRNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEASAKSFLWVITPPV 319 (427)
Q Consensus 240 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~ 319 (427)
+.++++++++|+++.+. ...+++++.+|++. ++++|||++||+.. ..+.+..+++++++.+.++||+++...
T Consensus 189 --~~~~~~~~~~G~~~~~~---~~~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~ 260 (404)
T 3h4t_A 189 --RPTDLGTVQTGAWILPD---QRPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAG 260 (404)
T ss_dssp --CTTCCSCCBCCCCCCCC---CCCCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTT
T ss_pred --CCCCCCeEEeCccccCC---CCCCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 34667899999887653 34577889999975 36789999999987 677889999999999999999988652
Q ss_pred CCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCcEEeccCcccchhhH
Q 035495 320 GFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPIAAEQTYNS 399 (427)
Q Consensus 320 ~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na 399 (427)
...+. . +.|+.+.+|+||.++|++++ +||||||+||++||+++|||+|++|+..||+.||
T Consensus 261 ---------~~~~~-------~--~~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na 320 (404)
T 3h4t_A 261 ---------LGRID-------E--GDDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYA 320 (404)
T ss_dssp ---------CCCSS-------C--CTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred ---------ccccc-------C--CCCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHH
Confidence 00111 1 67899999999999999998 8999999999999999999999999999999999
Q ss_pred HHHHhhhceeEEEecCCCcccccccc
Q 035495 400 KMLVEEMGVAVEMTRGVQSTIVGHEV 425 (427)
Q Consensus 400 ~~v~~~lG~G~~l~~~~~~~~~~~~i 425 (427)
+++++ .|+|+.++. +.++.++|
T Consensus 321 ~~~~~-~G~g~~l~~---~~~~~~~l 342 (404)
T 3h4t_A 321 GRVAD-LGVGVAHDG---PTPTVESL 342 (404)
T ss_dssp HHHHH-HTSEEECSS---SSCCHHHH
T ss_pred HHHHH-CCCEeccCc---CCCCHHHH
Confidence 99999 599999987 34444443
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.5e-37 Score=302.02 Aligned_cols=335 Identities=13% Similarity=0.123 Sum_probs=224.6
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCC
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPP 82 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 82 (427)
.+|+||+|+++++.||++|+++||++|++ +||+|+|++++.+.+.+++ .+++|..++.+ ++.
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~-~Gh~V~v~~~~~~~~~~~~------------~G~~~~~~~~~-----~~~ 79 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVR-RGHRVSYVTAGGFAEPVRA------------AGATVVPYQSE-----IID 79 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH------------TTCEEEECCCS-----TTT
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh------------cCCEEEecccc-----ccc
Confidence 35789999999999999999999999999 9999999999999999888 67889977742 111
Q ss_pred CCC---CCccchhhHHHH-HHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEec-CCcchHHHHHHHhCCceEEEecchHHH
Q 035495 83 NTE---NTENLSLDLIIN-FFTSSQSPKTPLYNLLMDIKEKAGKPPICIITD-TFFGWAVDVAKSAGSTNVTFATGGAYV 157 (427)
Q Consensus 83 ~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~ 157 (427)
... .........+.. +..........+.+++++.+ ||+||+| ...+++..+|+++|||++.+.+.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~ 153 (415)
T 3rsc_A 80 ADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDV------PDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASN 153 (415)
T ss_dssp CCHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSSC------CSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHhccC------CCEEEECchhhhHHHHHHHHhCCCEEEEEeccccc
Confidence 100 000001111111 22222223344455555444 9999999 777889999999999999987543210
Q ss_pred H------HHHHhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCccc
Q 035495 158 T------LAYTSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAED 231 (427)
Q Consensus 158 ~------~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 231 (427)
. ......+ ...+.........+..+............+. ....+..++.....
T Consensus 154 ~~~~~~~~~~~~~~---------------~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~l~~~~~~ 212 (415)
T 3rsc_A 154 EHYSFSQDMVTLAG---------------TIDPLDLPVFRDTLRDLLAEHGLSRSVVDCW------NHVEQLNLVFVPKA 212 (415)
T ss_dssp SSCCHHHHHHHHHT---------------CCCGGGCHHHHHHHHHHHHHTTCCCCHHHHH------TCCCSEEEESSCTT
T ss_pred Cccccccccccccc---------------cCChhhHHHHHHHHHHHHHHcCCCCChhhhh------cCCCCeEEEEcCcc
Confidence 0 0000000 0000000000011111111111111000000 01114455555444
Q ss_pred cChhHHHHHHhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcE
Q 035495 232 IEPGALQWLRNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEASAKSF 311 (427)
Q Consensus 232 l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~ 311 (427)
++ +.+..++.++.++||+.... .+..+|....+++++|||++||......+.+..+++++++.+.++
T Consensus 213 ~~-----~~~~~~~~~~~~vGp~~~~~--------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~ 279 (415)
T 3rsc_A 213 FQ-----IAGDTFDDRFVFVGPCFDDR--------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHV 279 (415)
T ss_dssp TS-----TTGGGCCTTEEECCCCCCCC--------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEE
T ss_pred cC-----CCcccCCCceEEeCCCCCCc--------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEE
Confidence 44 34566788899999988653 334456655567889999999998777788999999999999999
Q ss_pred EEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCcEEeccC
Q 035495 312 LWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPI 391 (427)
Q Consensus 312 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~ 391 (427)
+|.++.+. + .+.+ ...+.|+.+.+|+||.++|++++ +||||||+||++||+++|+|+|++|.
T Consensus 280 v~~~g~~~------~------~~~l----~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~ 341 (415)
T 3rsc_A 280 VMTLGGQV------D------PAAL----GDLPPNVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVVVPQ 341 (415)
T ss_dssp EEECTTTS------C------GGGG----CCCCTTEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEECCC
T ss_pred EEEeCCCC------C------hHHh----cCCCCcEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEEeCC
Confidence 99988652 0 0111 01167899999999999999999 89999999999999999999999999
Q ss_pred cccchhhHHHHHhhhceeEEEec
Q 035495 392 AAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 392 ~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
..||..||+++++. |+|+.++.
T Consensus 342 ~~~q~~~a~~l~~~-g~g~~~~~ 363 (415)
T 3rsc_A 342 SFDVQPMARRVDQL-GLGAVLPG 363 (415)
T ss_dssp SGGGHHHHHHHHHH-TCEEECCG
T ss_pred cchHHHHHHHHHHc-CCEEEccc
Confidence 99999999999995 99999987
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=9.8e-37 Score=294.90 Aligned_cols=340 Identities=17% Similarity=0.164 Sum_probs=221.6
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCCCC
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPPNT 84 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 84 (427)
|+||+|++.++.||++|++.||++|++ +||+|+|++++.+.+.++. .|++|..++.+.. ......
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~------------~G~~~~~~~~~~~--~~~~~~ 68 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELAR-RGHRITYVTTPLFADEVKA------------AGAEVVLYKSEFD--TFHVPE 68 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHHHH------------TTCEEEECCCGGG--TSSSSS
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHh-CCCEEEEEcCHHHHHHHHH------------cCCEEEecccccc--cccccc
Confidence 469999999999999999999999999 9999999999888888887 6788987774211 000000
Q ss_pred CCCccchhhHHHH-HHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEec-CCcchHHHHHHHhCCceEEEecchHHHHHHHH
Q 035495 85 ENTENLSLDLIIN-FFTSSQSPKTPLYNLLMDIKEKAGKPPICIITD-TFFGWAVDVAKSAGSTNVTFATGGAYVTLAYT 162 (427)
Q Consensus 85 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 162 (427)
..........+.. +..........+.+++++.+ ||+||+| .+..++..+|+++|||++.+.+..........
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~ 142 (402)
T 3ia7_A 69 VVKQEDAETQLHLVYVRENVAILRAAEEALGDNP------PDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL 142 (402)
T ss_dssp SSCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCC------CSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHhccC------CCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc
Confidence 0111111111222 22222233344455555444 9999999 77888999999999999998754321000000
Q ss_pred --hhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCccccChhHHHHH
Q 035495 163 --SMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAEDIEPGALQWL 240 (427)
Q Consensus 163 --~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~ 240 (427)
....... ...+.........+..+........... .... ...+..++.....++ ..
T Consensus 143 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~--~~~~~~l~~~~~~~~-----~~ 200 (402)
T 3ia7_A 143 FKELWKSNG-----------QRHPADVEAVHSVLVDLLGKYGVDTPVK----EYWD--EIEGLTIVFLPKSFQ-----PF 200 (402)
T ss_dssp HHHHHHHHT-----------CCCGGGSHHHHHHHHHHHHTTTCCSCHH----HHHT--CCCSCEEESSCGGGS-----TT
T ss_pred ccccccccc-----------ccChhhHHHHHHHHHHHHHHcCCCCChh----hhhc--CCCCeEEEEcChHhC-----Cc
Confidence 0000000 0000000000011111111111111000 0000 011344555444444 33
Q ss_pred HhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCC
Q 035495 241 RNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEASAKSFLWVITPPVG 320 (427)
Q Consensus 241 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~ 320 (427)
...++.++.++||+.... ....+|+...+++++||+++||......+.+..+++++++.+.+++|.++.+.
T Consensus 201 ~~~~~~~~~~vGp~~~~~--------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 271 (402)
T 3ia7_A 201 AETFDERFAFVGPTLTGR--------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFL- 271 (402)
T ss_dssp GGGCCTTEEECCCCCCC------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTS-
T ss_pred cccCCCCeEEeCCCCCCc--------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcC-
Confidence 556778899999987653 23345665556688999999999877778899999999999999999988652
Q ss_pred CCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCcEEeccC-cccchhhH
Q 035495 321 FDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPI-AAEQTYNS 399 (427)
Q Consensus 321 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~-~~DQ~~na 399 (427)
+ .+.+. ..+.|+.+.+|+|+.++|++++ +||||||+||++||+++|+|+|++|. ..||..||
T Consensus 272 -----~--~~~~~--------~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a 334 (402)
T 3ia7_A 272 -----D--PAVLG--------PLPPNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSA 334 (402)
T ss_dssp -----C--GGGGC--------SCCTTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHH
T ss_pred -----C--hhhhC--------CCCCcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHH
Confidence 0 00011 1167899999999999999999 89999999999999999999999999 99999999
Q ss_pred HHHHhhhceeEEEec
Q 035495 400 KMLVEEMGVAVEMTR 414 (427)
Q Consensus 400 ~~v~~~lG~G~~l~~ 414 (427)
.++++. |+|+.++.
T Consensus 335 ~~~~~~-g~g~~~~~ 348 (402)
T 3ia7_A 335 ERVIEL-GLGSVLRP 348 (402)
T ss_dssp HHHHHT-TSEEECCG
T ss_pred HHHHHc-CCEEEccC
Confidence 999995 99999987
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1e-35 Score=290.50 Aligned_cols=339 Identities=20% Similarity=0.210 Sum_probs=216.7
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPPN 83 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 83 (427)
+++||+|++.++.||++|++.||++|++ +||+|++++++...+.+.+ .+++++.++.. ++..
T Consensus 6 ~m~kIl~~~~~~~Gh~~p~~~la~~L~~-~G~~V~~~~~~~~~~~~~~------------~g~~~~~~~~~-----~~~~ 67 (430)
T 2iyf_A 6 TPAHIAMFSIAAHGHVNPSLEVIRELVA-RGHRVTYAIPPVFADKVAA------------TGPRPVLYHST-----LPGP 67 (430)
T ss_dssp --CEEEEECCSCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHT------------TSCEEEECCCC-----SCCT
T ss_pred ccceEEEEeCCCCccccchHHHHHHHHH-CCCeEEEEeCHHHHHHHHh------------CCCEEEEcCCc-----Cccc
Confidence 3579999999999999999999999999 9999999999888777766 66888877631 1111
Q ss_pred CCCC---ccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEEecchHHHHHH
Q 035495 84 TENT---ENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTFATGGAYVTLA 160 (427)
Q Consensus 84 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 160 (427)
.... .......+..+..........+.+++++. +||+||+|.+.+++..+|+++|||++.+++........
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 141 (430)
T 2iyf_A 68 DADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADD------IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGY 141 (430)
T ss_dssp TSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTS------CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTH
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc------CCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccc
Confidence 1110 00011111112222222334445555543 49999999887788999999999999988654200000
Q ss_pred HHhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCccccChhHHHHH
Q 035495 161 YTSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAEDIEPGALQWL 240 (427)
Q Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~ 240 (427)
...+..... ......++.. .....+..++......... .......+.+++++...+++.
T Consensus 142 ~~~~~~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~-------~~~~~~~~~~l~~~~~~~~~~----- 200 (430)
T 2iyf_A 142 EEEVAEPMW-----REPRQTERGR----AYYARFEAWLKENGITEHP-------DTFASHPPRSLVLIPKALQPH----- 200 (430)
T ss_dssp HHHTHHHHH-----HHHHHSHHHH----HHHHHHHHHHHHTTCCSCH-------HHHHHCCSSEEECSCGGGSTT-----
T ss_pred ccccccchh-----hhhccchHHH----HHHHHHHHHHHHhCCCCCH-------HHHhcCCCcEEEeCcHHhCCC-----
Confidence 000000000 0000000000 0000111111111111000 001113456788888777753
Q ss_pred HhcCCCC-EEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhC-CCcEEEEEcCC
Q 035495 241 RNYIKLP-VWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEAS-AKSFLWVITPP 318 (427)
Q Consensus 241 ~~~~~~~-~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~ 318 (427)
...++++ ++++||++... .+..+|.+..+++++||+++||......+.+..+++++++. +.+++|.++.+
T Consensus 201 ~~~~~~~~v~~vG~~~~~~--------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~ 272 (430)
T 2iyf_A 201 ADRVDEDVYTFVGACQGDR--------AEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRK 272 (430)
T ss_dssp GGGSCTTTEEECCCCC-------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC--
T ss_pred cccCCCccEEEeCCcCCCC--------CCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 2456677 99999876532 11235665555678999999999855567888899999885 88998988865
Q ss_pred CCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCcEEeccCcccchhh
Q 035495 319 VGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPIAAEQTYN 398 (427)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~n 398 (427)
. ..+.+ ...+.|+.+.+|+||.++|++++ +||||||+||++||+++|+|+|++|..+||..|
T Consensus 273 ~------------~~~~l----~~~~~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~ 334 (430)
T 2iyf_A 273 V------------TPAEL----GELPDNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVDQFGN 334 (430)
T ss_dssp -------------CGGGG----CSCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHH
T ss_pred C------------ChHHh----ccCCCCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCCCEEECCCccchHHH
Confidence 2 00111 01156899999999999999999 799999999999999999999999999999999
Q ss_pred HHHHHhhhceeEEEec
Q 035495 399 SKMLVEEMGVAVEMTR 414 (427)
Q Consensus 399 a~~v~~~lG~G~~l~~ 414 (427)
|.++++ .|+|+.++.
T Consensus 335 a~~~~~-~g~g~~~~~ 349 (430)
T 2iyf_A 335 ADMLQG-LGVARKLAT 349 (430)
T ss_dssp HHHHHH-TTSEEECCC
T ss_pred HHHHHH-cCCEEEcCC
Confidence 999999 599999986
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=3.8e-36 Score=294.39 Aligned_cols=336 Identities=13% Similarity=0.122 Sum_probs=205.6
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPPN 83 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 83 (427)
++|||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.++. .|++|+.++.....+++...
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~-~GheV~~~~~~~~~~~v~~------------~G~~~~~i~~~~~~~~~~~~ 85 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRA-AGHEVRVVASPALTEDITA------------AGLTAVPVGTDVDLVDFMTH 85 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHH-TTCEEEEEECGGGHHHHHT------------TTCCEEECSCCCCHHHHHHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHH-CCCeEEEEeCchhHHHHHh------------CCCceeecCCccchHHHhhh
Confidence 4689999999999999999999999999 9999999999988888887 77899987742100000000
Q ss_pred C----------CC-----CccchhhHHHH----HHHHhcC------CcHHHHHHHHhhhhhcCCCCcEEEecCCcchHHH
Q 035495 84 T----------EN-----TENLSLDLIIN----FFTSSQS------PKTPLYNLLMDIKEKAGKPPICIITDTFFGWAVD 138 (427)
Q Consensus 84 ~----------~~-----~~~~~~~~~~~----~~~~~~~------~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~ 138 (427)
. .. ........+.. +...+.. ....+.+++++++ ||+||+|.+..++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------pDlVv~d~~~~~~~~ 159 (441)
T 2yjn_A 86 AGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWR------PDLVIWEPLTFAAPI 159 (441)
T ss_dssp TTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHC------CSEEEECTTCTHHHH
T ss_pred hhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcC------CCEEEecCcchhHHH
Confidence 0 00 00000001111 1111111 2233334444444 999999987788999
Q ss_pred HHHHhCCceEEEecchHHHHHH---HHhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhh
Q 035495 139 VAKSAGSTNVTFATGGAYVTLA---YTSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNI 215 (427)
Q Consensus 139 ~A~~lgiP~v~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (427)
+|+.+|||++.+...+...... +.....+.+.. .+.. ...+.+..+.......... ..
T Consensus 160 aA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~---~~~~~l~~~~~~~g~~~~~----~~-- 220 (441)
T 2yjn_A 160 AAAVTGTPHARLLWGPDITTRARQNFLGLLPDQPEE----------HRED---PLAEWLTWTLEKYGGPAFD----EE-- 220 (441)
T ss_dssp HHHHHTCCEEEECSSCCHHHHHHHHHHHHGGGSCTT----------TCCC---HHHHHHHHHHHHTTCCCCC----GG--
T ss_pred HHHHcCCCEEEEecCCCcchhhhhhhhhhccccccc----------cccc---hHHHHHHHHHHHcCCCCCC----cc--
Confidence 9999999999997654321111 11111111100 0000 0001111111111110000 00
Q ss_pred hcccccceEEEcCccccChhHHHHHHhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccC---
Q 035495 216 TQSFESYGMLCNTAEDIEPGALQWLRNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTI--- 292 (427)
Q Consensus 216 ~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~--- 292 (427)
....+..+....+.++++ ..++ . ..+++.... .+.++.+|++..+++++|||++||+...
T Consensus 221 --~~~~~~~l~~~~~~~~~~------~~~~-~-~~~~~~~~~-------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~ 283 (441)
T 2yjn_A 221 --VVVGQWTIDPAPAAIRLD------TGLK-T-VGMRYVDYN-------GPSVVPEWLHDEPERRRVCLTLGISSRENSI 283 (441)
T ss_dssp --GTSCSSEEECSCGGGSCC------CCCC-E-EECCCCCCC-------SSCCCCGGGSSCCSSCEEEEEC---------
T ss_pred --ccCCCeEEEecCccccCC------CCCC-C-CceeeeCCC-------CCcccchHhhcCCCCCEEEEECCCCcccccC
Confidence 001233444444334321 1221 1 223332111 1234667987666778999999999764
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCC
Q 035495 293 SSSQMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCG 372 (427)
Q Consensus 293 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG 372 (427)
..+.+..+++++++.+.++||+++... ...+. . . +.|+.+.+|+||.++|++++ +||||||
T Consensus 284 ~~~~~~~~~~al~~~~~~~v~~~g~~~---------~~~l~-~-----~--~~~v~~~~~~~~~~ll~~ad--~~V~~~G 344 (441)
T 2yjn_A 284 GQVSIEELLGAVGDVDAEIIATFDAQQ---------LEGVA-N-----I--PDNVRTVGFVPMHALLPTCA--ATVHHGG 344 (441)
T ss_dssp -CCSTTTTHHHHHTSSSEEEECCCTTT---------TSSCS-S-----C--CSSEEECCSCCHHHHGGGCS--EEEECCC
T ss_pred hHHHHHHHHHHHHcCCCEEEEEECCcc---------hhhhc-c-----C--CCCEEEecCCCHHHHHhhCC--EEEECCC
Confidence 345677889999999999999988542 01111 1 1 67899999999999999998 8999999
Q ss_pred hhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEec
Q 035495 373 WNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 373 ~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
+||++||+++|||+|++|...||..||+++++ .|+|+.++.
T Consensus 345 ~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~ 385 (441)
T 2yjn_A 345 PGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV 385 (441)
T ss_dssp HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT
T ss_pred HHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc
Confidence 99999999999999999999999999999999 499999987
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=4.7e-34 Score=274.51 Aligned_cols=313 Identities=13% Similarity=0.124 Sum_probs=208.1
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCC-------
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDH------- 78 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------- 78 (427)
|||++++.++.||++|+++||++|++ +||+|++++++...+.++. .+++++.++.....+
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~-~Gh~V~~~~~~~~~~~~~~------------~g~~~~~~~~~~~~~~~~~~~~ 67 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARN-AGHQVVMAANQDMGPVVTG------------VGLPAVATTDLPIRHFITTDRE 67 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH------------TTCCEEESCSSCHHHHHHBCTT
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh------------CCCEEEEeCCcchHHHHhhhcc
Confidence 58999999999999999999999999 9999999999887777777 668888776321000
Q ss_pred CCCCCCCCCccchhhHH-HH-HHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEEecchHH
Q 035495 79 GLPPNTENTENLSLDLI-IN-FFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTFATGGAY 156 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 156 (427)
..+.... ........+ .. +..........+.+++++.+ ||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 68 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~ 140 (384)
T 2p6p_A 68 GRPEAIP-SDPVAQARFTGRWFARMAASSLPRMLDFSRAWR------PDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD 140 (384)
T ss_dssp SCBCCCC-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC
T ss_pred cCccccC-cchHHHHHHHHHHHHhhHHHHHHHHHHHHhccC------CcEEEECcchhhHHHHHHhcCCCEEEeccCCcc
Confidence 0110000 000000001 11 11111223344555555554 999999987788889999999999987643210
Q ss_pred HHHHHHhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhh-hcccccceEEEcCccccChh
Q 035495 157 VTLAYTSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNI-TQSFESYGMLCNTAEDIEPG 235 (427)
Q Consensus 157 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~l~~~ 235 (427)
+ .+ +. ..+... ..++..... ......+.+++++...++++
T Consensus 141 ------------~-----------~~------~~-~~~~~~---------~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 181 (384)
T 2p6p_A 141 ------------A-----------DG------IH-PGADAE---------LRPELSELGLERLPAPDLFIDICPPSLRPA 181 (384)
T ss_dssp ------------C-----------TT------TH-HHHHHH---------THHHHHHTTCSSCCCCSEEEECSCGGGSCT
T ss_pred ------------c-----------ch------hh-HHHHHH---------HHHHHHHcCCCCCCCCCeEEEECCHHHCCC
Confidence 0 00 00 000000 000111100 00111456788887777643
Q ss_pred HHHHHHhcCC-CCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccC-----CHHHHHHHHHHHHhCCC
Q 035495 236 ALQWLRNYIK-LPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTI-----SSSQMMELDIGLEASAK 309 (427)
Q Consensus 236 ~~~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~-----~~~~~~~~~~a~~~~~~ 309 (427)
..++ .++.+++ .. .+.++.+|++..+++++|||++||.... ..+.+..+++++++.+.
T Consensus 182 ------~~~~~~~~~~~~---~~-------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~ 245 (384)
T 2p6p_A 182 ------NAAPARMMRHVA---TS-------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDV 245 (384)
T ss_dssp ------TSCCCEECCCCC---CC-------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTC
T ss_pred ------CCCCCCceEecC---CC-------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCc
Confidence 1122 1222332 11 1234667887655678999999999764 45778899999999999
Q ss_pred cEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCcEEec
Q 035495 310 SFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGW 389 (427)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~ 389 (427)
+++|+.+.. + .+.+. .. +.|+.+ +|+||.++|++++ +||||||+||++||+++|+|+|++
T Consensus 246 ~~~~~~g~~-------~------~~~l~--~~--~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~v~~ 305 (384)
T 2p6p_A 246 ELIVAAPDT-------V------AEALR--AE--VPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLSAGVPQLLI 305 (384)
T ss_dssp EEEEECCHH-------H------HHHHH--HH--CTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHHTTCCEEEC
T ss_pred EEEEEeCCC-------C------HHhhC--CC--CCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHHhCCCEEEc
Confidence 999987742 0 01111 12 678999 9999999999988 899999999999999999999999
Q ss_pred cCcccchhhHHHHHhhhceeEEEec
Q 035495 390 PIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 390 P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
|...||..||.++++ .|+|+.++.
T Consensus 306 p~~~dq~~~a~~~~~-~g~g~~~~~ 329 (384)
T 2p6p_A 306 PKGSVLEAPARRVAD-YGAAIALLP 329 (384)
T ss_dssp CCSHHHHHHHHHHHH-HTSEEECCT
T ss_pred cCcccchHHHHHHHH-CCCeEecCc
Confidence 999999999999999 599999986
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=7.7e-33 Score=267.34 Aligned_cols=315 Identities=13% Similarity=0.111 Sum_probs=208.8
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCC
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPP 82 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 82 (427)
+++|||+|++.++.||++|++.||++|++ +||+|+++++ .+.+.++. .++++..++... .+..
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~-~GheV~v~~~-~~~~~~~~------------~G~~~~~~~~~~---~~~~ 80 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRT-AGHDVLIAVA-EHADRAAA------------AGLEVVDVAPDY---SAVK 80 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEES-SCHHHHHT------------TTCEEEESSTTC---CHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHH-CCCEEEEecc-chHHHHHh------------CCCeeEecCCcc---CHHH
Confidence 45689999999999999999999999999 9999999999 88888887 778999777321 0000
Q ss_pred CCC---------------CCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCce
Q 035495 83 NTE---------------NTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTN 147 (427)
Q Consensus 83 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~ 147 (427)
... ............+......+...+.+++++++ ||+||+|...+++..+|+.+|||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------pDlVv~d~~~~~~~~aA~~~giP~ 154 (398)
T 3oti_A 81 VFEQVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYR------PDLVVYEQGATVGLLAADRAGVPA 154 (398)
T ss_dssp HHHHHHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHC------CSEEEEETTCHHHHHHHHHHTCCE
T ss_pred HhhhcccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcC------CCEEEECchhhHHHHHHHHcCCCE
Confidence 000 00000111112233334566677888888877 999999988888899999999999
Q ss_pred EEEecchHHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEc
Q 035495 148 VTFATGGAYVTLAYTSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCN 227 (427)
Q Consensus 148 v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 227 (427)
+......... ..+.. .....+.... .............+..
T Consensus 155 v~~~~~~~~~-----------------------~~~~~---~~~~~l~~~~-------------~~~~~~~~~~~~~~~~ 195 (398)
T 3oti_A 155 VQRNQSAWRT-----------------------RGMHR---SIASFLTDLM-------------DKHQVSLPEPVATIES 195 (398)
T ss_dssp EEECCTTCCC-----------------------TTHHH---HHHTTCHHHH-------------HHTTCCCCCCSEEECS
T ss_pred EEEeccCCCc-----------------------cchhh---HHHHHHHHHH-------------HHcCCCCCCCCeEEEe
Confidence 9875331100 00000 0000011111 1110001111222322
Q ss_pred CccccChhHHHHHHhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccC--CHHHHHHHHHHHH
Q 035495 228 TAEDIEPGALQWLRNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTI--SSSQMMELDIGLE 305 (427)
Q Consensus 228 ~~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~--~~~~~~~~~~a~~ 305 (427)
....+..+ .....++ +.++ |. ..+....+|+...+++++|||++||.... ..+.+..++++++
T Consensus 196 ~~~~~~~~---~~~~~~~--~~~~-~~---------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~ 260 (398)
T 3oti_A 196 FPPSLLLE---AEPEGWF--MRWV-PY---------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAG 260 (398)
T ss_dssp SCGGGGTT---SCCCSBC--CCCC-CC---------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHH
T ss_pred CCHHHCCC---CCCCCCC--cccc-CC---------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHH
Confidence 22222211 0001111 1111 00 11234456776666788999999999653 5677889999999
Q ss_pred hCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCc
Q 035495 306 ASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLP 385 (427)
Q Consensus 306 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP 385 (427)
+.+.+++|+.+... .+.+. ..+.|+.+.+|+|+.++|++++ +||||||.||++||+++|+|
T Consensus 261 ~~~~~~v~~~g~~~---------~~~l~--------~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Eal~~G~P 321 (398)
T 3oti_A 261 EVDADFVLALGDLD---------ISPLG--------TLPRNVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMTAIDAGIP 321 (398)
T ss_dssp TSSSEEEEECTTSC---------CGGGC--------SCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCC
T ss_pred cCCCEEEEEECCcC---------hhhhc--------cCCCcEEEEccCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCC
Confidence 99999999988652 00011 1167899999999999999999 89999999999999999999
Q ss_pred EEeccCcccchhhH--HHHHhhhceeEEEec
Q 035495 386 TIGWPIAAEQTYNS--KMLVEEMGVAVEMTR 414 (427)
Q Consensus 386 ~v~~P~~~DQ~~na--~~v~~~lG~G~~l~~ 414 (427)
+|++|...||..|| .++++. |+|+.++.
T Consensus 322 ~v~~p~~~dq~~~a~~~~~~~~-g~g~~~~~ 351 (398)
T 3oti_A 322 QLLAPDPRDQFQHTAREAVSRR-GIGLVSTS 351 (398)
T ss_dssp EEECCCTTCCSSCTTHHHHHHH-TSEEECCG
T ss_pred EEEcCCCchhHHHHHHHHHHHC-CCEEeeCC
Confidence 99999999999999 999995 99999987
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.2e-32 Score=266.07 Aligned_cols=321 Identities=15% Similarity=0.149 Sum_probs=197.2
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCC-
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLP- 81 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~- 81 (427)
+.+|||+|++.++.||++|+++||++|++ +||+|++++++...+.++. .++.+..++.......+.
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~------------~G~~~~~~~~~~~~~~~~~ 79 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRA-AGHEVLVAASENMGPTVTG------------AGLPFAPTCPSLDMPEVLS 79 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEEEGGGHHHHHH------------TTCCEEEEESSCCHHHHHS
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHH-CCCEEEEEcCHHHHHHHHh------------CCCeeEecCCccchHhhhh
Confidence 45799999999999999999999999999 9999999999888888888 667777665210000000
Q ss_pred ---CC-CCCCccchhhHH----HHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEEecc
Q 035495 82 ---PN-TENTENLSLDLI----INFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTFATG 153 (427)
Q Consensus 82 ---~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~ 153 (427)
.. ............ ..+......+...+.+++++++ ||+||+|...+++..+|+.+|||++.+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------pDlVv~d~~~~~~~~~a~~~giP~v~~~~~ 153 (398)
T 4fzr_A 80 WDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWK------PDLVLTETYSLTGPLVAATLGIPWIEQSIR 153 (398)
T ss_dssp BCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CSEEEEETTCTHHHHHHHHHTCCEEEECCS
T ss_pred hhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CCEEEECccccHHHHHHHhhCCCEEEeccC
Confidence 00 000000011111 1112222334455666666666 999999987788899999999999987654
Q ss_pred hHHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCccccC
Q 035495 154 GAYVTLAYTSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAEDIE 233 (427)
Q Consensus 154 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 233 (427)
......... .....+......... .........+......+.
T Consensus 154 ~~~~~~~~~--------------------------~~~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~~~ 195 (398)
T 4fzr_A 154 LASPELIKS--------------------------AGVGELAPELAELGL------------TDFPDPLLSIDVCPPSME 195 (398)
T ss_dssp SCCCHHHHH--------------------------HHHHHTHHHHHTTTC------------SSCCCCSEEEECSCGGGC
T ss_pred CCCchhhhH--------------------------HHHHHHHHHHHHcCC------------CCCCCCCeEEEeCChhhC
Confidence 211000000 000001111110000 001111233333333333
Q ss_pred hhHHHHHHhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccC--------CHHHHHHHHHHHH
Q 035495 234 PGALQWLRNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTI--------SSSQMMELDIGLE 305 (427)
Q Consensus 234 ~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~--------~~~~~~~~~~a~~ 305 (427)
.. .......+.++++. ..+.++.+|+...+++++|||++||.... ..+.+..++++++
T Consensus 196 ~~-----~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~ 261 (398)
T 4fzr_A 196 AQ-----PKPGTTKMRYVPYN---------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELP 261 (398)
T ss_dssp ---------CCCEECCCCCCC---------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGG
T ss_pred CC-----CCCCCCCeeeeCCC---------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHH
Confidence 21 11000011122110 01234556766555678999999999653 3456888999999
Q ss_pred hCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCc
Q 035495 306 ASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLP 385 (427)
Q Consensus 306 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP 385 (427)
+.+.+++|+.+... .+.+. ..+.|+.+.+|+|+.++|++++ +||||||.||++||+++|+|
T Consensus 262 ~~~~~~v~~~~~~~---------~~~l~--------~~~~~v~~~~~~~~~~ll~~ad--~~v~~gG~~t~~Ea~~~G~P 322 (398)
T 4fzr_A 262 KLGFEVVVAVSDKL---------AQTLQ--------PLPEGVLAAGQFPLSAIMPACD--VVVHHGGHGTTLTCLSEGVP 322 (398)
T ss_dssp GGTCEEEECCCC-------------------------CCTTEEEESCCCHHHHGGGCS--EEEECCCHHHHHHHHHTTCC
T ss_pred hCCCEEEEEeCCcc---------hhhhc--------cCCCcEEEeCcCCHHHHHhhCC--EEEecCCHHHHHHHHHhCCC
Confidence 99999999887641 00111 1167999999999999999999 89999999999999999999
Q ss_pred EEeccCcccchhhHHHHHhhhceeEEEec
Q 035495 386 TIGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 386 ~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
+|++|...||..||.++++. |+|+.++.
T Consensus 323 ~v~~p~~~~q~~~a~~~~~~-g~g~~~~~ 350 (398)
T 4fzr_A 323 QVSVPVIAEVWDSARLLHAA-GAGVEVPW 350 (398)
T ss_dssp EEECCCSGGGHHHHHHHHHT-TSEEECC-
T ss_pred EEecCCchhHHHHHHHHHHc-CCEEecCc
Confidence 99999999999999999995 99999987
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.97 E-value=4.4e-30 Score=247.37 Aligned_cols=317 Identities=11% Similarity=0.088 Sum_probs=200.4
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEc-CCCCCCCC----
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVEL-PFCSSDHG---- 79 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~---- 79 (427)
+|||+|++.++.||++|++.|+++|++ +||+|++++++...+.+.. .++++..+ +.+.....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~------------~g~~~~~~~~~~~~~~~~~~~ 67 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQA-SGHEVLIAAPPELQATAHG------------AGLTTAGIRGNDRTGDTGGTT 67 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHH-TTCEEEEEECHHHHHHHHH------------BTCEEEEC-------------
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHH-CCCEEEEecChhhHHHHHh------------CCCceeeecCCccchhhhhhh
Confidence 479999999999999999999999999 9999999999887777877 66788877 32110000
Q ss_pred -CCCCCCCCccchhhHH-HHHHHHhcCC-------cHHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEE
Q 035495 80 -LPPNTENTENLSLDLI-INFFTSSQSP-------KTPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTF 150 (427)
Q Consensus 80 -~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 150 (427)
.+.............. ..+......+ ...+.+++++++ ||+||+|...+++..+|+.+|||++.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------PD~Vv~~~~~~~~~~aa~~~giP~v~~ 141 (391)
T 3tsa_A 68 QLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWR------PSVLLVDVCALIGRVLGGLLDLPVVLH 141 (391)
T ss_dssp -CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CSEEEEETTCHHHHHHHHHTTCCEEEE
T ss_pred cccccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcC------CCEEEeCcchhHHHHHHHHhCCCEEEE
Confidence 0000000000000111 1122222233 555667777666 999999987778889999999999997
Q ss_pred ecchHHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhh-cccccceEEEcCc
Q 035495 151 ATGGAYVTLAYTSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNIT-QSFESYGMLCNTA 229 (427)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~ 229 (427)
........ . ........++. +....... .....+..+....
T Consensus 142 ~~~~~~~~--------------------------~---~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 183 (391)
T 3tsa_A 142 RWGVDPTA--------------------------G---PFSDRAHELLD---------PVCRHHGLTGLPTPELILDPCP 183 (391)
T ss_dssp CCSCCCTT--------------------------T---HHHHHHHHHHH---------HHHHHTTSSSSCCCSEEEECSC
T ss_pred ecCCcccc--------------------------c---cccchHHHHHH---------HHHHHcCCCCCCCCceEEEecC
Confidence 64321000 0 00000000100 00000000 0011133344333
Q ss_pred cccChhHHHHHHhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCccc--CC-HHHHHHHHHHHHh
Q 035495 230 EDIEPGALQWLRNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNT--IS-SSQMMELDIGLEA 306 (427)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~--~~-~~~~~~~~~a~~~ 306 (427)
.+++.. .......+.|+ |.. .+....+|+...+++++||+++||... .. .+.+..++++ ++
T Consensus 184 ~~~~~~-----~~~~~~~~~~~-p~~---------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~ 247 (391)
T 3tsa_A 184 PSLQAS-----DAPQGAPVQYV-PYN---------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TE 247 (391)
T ss_dssp GGGSCT-----TSCCCEECCCC-CCC---------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HT
T ss_pred hhhcCC-----CCCccCCeeee-cCC---------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-cc
Confidence 333311 11111111222 111 123344677665678899999999843 23 6778888888 87
Q ss_pred C-CCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCc
Q 035495 307 S-AKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLP 385 (427)
Q Consensus 307 ~-~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP 385 (427)
. +.+++|..+... .+.+. ..+.|+.+.+|+|+.++|++++ +||||||.||++||+++|+|
T Consensus 248 ~p~~~~v~~~~~~~---------~~~l~--------~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P 308 (391)
T 3tsa_A 248 LPGVEAVIAVPPEH---------RALLT--------DLPDNARIAESVPLNLFLRTCE--LVICAGGSGTAFTATRLGIP 308 (391)
T ss_dssp STTEEEEEECCGGG---------GGGCT--------TCCTTEEECCSCCGGGTGGGCS--EEEECCCHHHHHHHHHTTCC
T ss_pred CCCeEEEEEECCcc---------hhhcc--------cCCCCEEEeccCCHHHHHhhCC--EEEeCCCHHHHHHHHHhCCC
Confidence 7 788888877531 11111 1167899999999999999999 89999999999999999999
Q ss_pred EEeccCcccchhhHHHHHhhhceeEEEec
Q 035495 386 TIGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 386 ~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
+|++|...||..|+.++++. |+|+.++.
T Consensus 309 ~v~~p~~~~q~~~a~~~~~~-g~g~~~~~ 336 (391)
T 3tsa_A 309 QLVLPQYFDQFDYARNLAAA-GAGICLPD 336 (391)
T ss_dssp EEECCCSTTHHHHHHHHHHT-TSEEECCS
T ss_pred EEecCCcccHHHHHHHHHHc-CCEEecCc
Confidence 99999999999999999995 99999986
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.96 E-value=2.8e-28 Score=236.36 Aligned_cols=327 Identities=15% Similarity=0.156 Sum_probs=206.8
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCC--C-----
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFC--S----- 75 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~--~----- 75 (427)
+.+|||+|++.++.||++|++.||++|++ +||+|++++++...+.+.. .++++..++.. .
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~------------~g~~~~~~~~~~~~~~~~~ 84 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARA-AGHEVTFATGEGFAGTLRK------------LGFEPVATGMPVFDGFLAA 84 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH------------TTCEEEECCCCHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHH-CCCEEEEEccHHHHHHHHh------------cCCceeecCcccccchhhh
Confidence 45799999999999999999999999999 9999999999877777777 67888877630 0
Q ss_pred -----CCCCCCCCCCCCccchhhHHHHHHHH-hcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEE
Q 035495 76 -----SDHGLPPNTENTENLSLDLIINFFTS-SQSPKTPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVT 149 (427)
Q Consensus 76 -----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~ 149 (427)
.....+.. ....... .....+... ...+...+.+++++.+ ||+||+|....++..+|+.+|||++.
T Consensus 85 ~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~------pDvVv~~~~~~~~~~aa~~~giP~v~ 156 (412)
T 3otg_A 85 LRIRFDTDSPEGL-TPEQLSE-LPQIVFGRVIPQRVFDELQPVIERLR------PDLVVQEISNYGAGLAALKAGIPTIC 156 (412)
T ss_dssp HHHHHSCSCCTTC-CHHHHTT-SHHHHHHTHHHHHHHHHHHHHHHHHC------CSEEEEETTCHHHHHHHHHHTCCEEE
T ss_pred hhhhhcccCCccC-ChhHhhH-HHHHHHhccchHHHHHHHHHHHHhcC------CCEEEECchhhHHHHHHHHcCCCEEE
Confidence 00000000 0000000 000111111 1122355666666666 99999998777788899999999998
Q ss_pred EecchHHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCc
Q 035495 150 FATGGAYVTLAYTSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTA 229 (427)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 229 (427)
........ ++... .....+..+......... . ......++.++..+.
T Consensus 157 ~~~~~~~~-----------------------~~~~~---~~~~~~~~~~~~~g~~~~-~------~~~~~~~d~~i~~~~ 203 (412)
T 3otg_A 157 HGVGRDTP-----------------------DDLTR---SIEEEVRGLAQRLGLDLP-P------GRIDGFGNPFIDIFP 203 (412)
T ss_dssp ECCSCCCC-----------------------SHHHH---HHHHHHHHHHHHTTCCCC-S------SCCGGGGCCEEECSC
T ss_pred ecccccCc-----------------------hhhhH---HHHHHHHHHHHHcCCCCC-c------ccccCCCCeEEeeCC
Confidence 75432100 00000 000001111111000000 0 000122334455444
Q ss_pred cccChhHHHHHHhcCCCCEEEeCccCCCCCCCCCCCchhhhhh-ccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhCC
Q 035495 230 EDIEPGALQWLRNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEW-LDLHDPASVLHISFGSQNTISSSQMMELDIGLEASA 308 (427)
Q Consensus 230 ~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~-l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~ 308 (427)
..++.. ...+......+.+.... ......+| ....+++++||+++||......+.+..+++++++.+
T Consensus 204 ~~~~~~-----~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~ 271 (412)
T 3otg_A 204 PSLQEP-----EFRARPRRHELRPVPFA-------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLD 271 (412)
T ss_dssp GGGSCH-----HHHTCTTEEECCCCCCC-------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSS
T ss_pred HHhcCC-----cccCCCCcceeeccCCC-------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCC
Confidence 444422 11222222222211111 12234455 333346789999999997556788889999999999
Q ss_pred CcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCcEEe
Q 035495 309 KSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIG 388 (427)
Q Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~ 388 (427)
.+++|..+... ..+.+.+ .+.|+.+.+|+|+.++|++++ +||+|||+||++||+++|+|+|+
T Consensus 272 ~~~~~~~g~~~--------~~~~l~~--------~~~~v~~~~~~~~~~~l~~ad--~~v~~~g~~t~~Ea~a~G~P~v~ 333 (412)
T 3otg_A 272 ADVLVASGPSL--------DVSGLGE--------VPANVRLESWVPQAALLPHVD--LVVHHGGSGTTLGALGAGVPQLS 333 (412)
T ss_dssp SEEEEECCSSC--------CCTTCCC--------CCTTEEEESCCCHHHHGGGCS--EEEESCCHHHHHHHHHHTCCEEE
T ss_pred CEEEEEECCCC--------Chhhhcc--------CCCcEEEeCCCCHHHHHhcCc--EEEECCchHHHHHHHHhCCCEEe
Confidence 99999988652 0011111 166899999999999999999 89999999999999999999999
Q ss_pred ccCcccchhhHHHHHhhhceeEEEec
Q 035495 389 WPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 389 ~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
+|...||..|+.++++. |.|+.++.
T Consensus 334 ~p~~~~q~~~~~~v~~~-g~g~~~~~ 358 (412)
T 3otg_A 334 FPWAGDSFANAQAVAQA-GAGDHLLP 358 (412)
T ss_dssp CCCSTTHHHHHHHHHHH-TSEEECCG
T ss_pred cCCchhHHHHHHHHHHc-CCEEecCc
Confidence 99999999999999995 99999987
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.94 E-value=1.4e-25 Score=213.27 Aligned_cols=291 Identities=16% Similarity=0.183 Sum_probs=177.0
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcc--hHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCCC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLN--IQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPPN 83 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~--~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 83 (427)
.||+|...++.||++|.++||++|++ +||+|+|++++.- .+.+.+ .+++++.++.. +++..
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~-~g~~V~~vg~~~g~e~~~v~~------------~g~~~~~i~~~----~~~~~ 65 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQA-RGYAVHWLGTPRGIENDLVPK------------AGLPLHLIQVS----GLRGK 65 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECSSSTHHHHTGG------------GTCCEEECC-----------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHh-CCCEEEEEECCchHhhchhhh------------cCCcEEEEECC----CcCCC
Confidence 58999999999999999999999999 9999999997653 334555 56788877642 33211
Q ss_pred CCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcch--HHHHHHHhCCceEEEecchHHHHHHH
Q 035495 84 TENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFGW--AVDVAKSAGSTNVTFATGGAYVTLAY 161 (427)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~ 161 (427)
. ...... ....+... ......++++.+ ||+||++....+ +..+|+.+|||++..-..
T Consensus 66 ~-~~~~~~--~~~~~~~~----~~~~~~~l~~~~------PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n-------- 124 (365)
T 3s2u_A 66 G-LKSLVK--APLELLKS----LFQALRVIRQLR------PVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN-------- 124 (365)
T ss_dssp ----------CHHHHHHH----HHHHHHHHHHHC------CSEEEECSSSTHHHHHHHHHHTTCCEEEEECS--------
T ss_pred C-HHHHHH--HHHHHHHH----HHHHHHHHHhcC------CCEEEEcCCcchHHHHHHHHHcCCCEEEEecc--------
Confidence 0 000000 01111111 123456677776 999999954443 457788899999864210
Q ss_pred HhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCccccChhHHHHHH
Q 035495 162 TSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAEDIEPGALQWLR 241 (427)
Q Consensus 162 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~ 241 (427)
..|++.+ +++.+ .++. ++.++++..+
T Consensus 125 -----------------~~~G~~n-----------------------r~l~~------~a~~-v~~~~~~~~~------- 150 (365)
T 3s2u_A 125 -----------------AVAGTAN-----------------------RSLAP------IARR-VCEAFPDTFP------- 150 (365)
T ss_dssp -----------------SSCCHHH-----------------------HHHGG------GCSE-EEESSTTSSC-------
T ss_pred -----------------hhhhhHH-----------------------Hhhcc------ccce-eeeccccccc-------
Confidence 1111110 01110 1111 2222322111
Q ss_pred hcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhC----CCcEEEEEcC
Q 035495 242 NYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEAS----AKSFLWVITP 317 (427)
Q Consensus 242 ~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~----~~~~i~~~~~ 317 (427)
...+.+++|+....... .+. .......+++++|+|..||..... ..+.+.+++++. +..++|.++.
T Consensus 151 --~~~k~~~~g~pvr~~~~----~~~--~~~~~~~~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~ 220 (365)
T 3s2u_A 151 --ASDKRLTTGNPVRGELF----LDA--HARAPLTGRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGR 220 (365)
T ss_dssp --C---CEECCCCCCGGGC----CCT--TSSCCCTTSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCT
T ss_pred --CcCcEEEECCCCchhhc----cch--hhhcccCCCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCc
Confidence 12456777876654310 001 111122235678999999886532 333455666553 4567777775
Q ss_pred CCCCCcchhhhccCCchhHHHHhccCCCcEEeccccch-HhhhcccCcceeeccCChhhHHHHHhcCCcEEeccCc----
Q 035495 318 PVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQ-LEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPIA---- 392 (427)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq-~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~---- 392 (427)
.. .+...+.....+.++.+.+|+++ .++++.++ ++|||+|.+|++|++++|+|+|.+|+.
T Consensus 221 ~~-------------~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~ 285 (365)
T 3s2u_A 221 QH-------------AEITAERYRTVAVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPHAID 285 (365)
T ss_dssp TT-------------HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-----C
T ss_pred cc-------------cccccceecccccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCCCCC
Confidence 42 12222222222567888899997 57999999 899999999999999999999999973
Q ss_pred ccchhhHHHHHhhhceeEEEec
Q 035495 393 AEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 393 ~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
.+|..||+.+++. |+|+.++.
T Consensus 286 ~~Q~~NA~~l~~~-G~a~~l~~ 306 (365)
T 3s2u_A 286 DHQTRNAEFLVRS-GAGRLLPQ 306 (365)
T ss_dssp CHHHHHHHHHHTT-TSEEECCT
T ss_pred cHHHHHHHHHHHC-CCEEEeec
Confidence 5899999999995 99999987
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.91 E-value=4e-24 Score=180.96 Aligned_cols=131 Identities=24% Similarity=0.445 Sum_probs=113.0
Q ss_pred CCCchhhhhhccCCCCCeEEEEecCCccc-CCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhc
Q 035495 263 SKNPEKIIEWLDLHDPASVLHISFGSQNT-ISSSQMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIK 341 (427)
Q Consensus 263 ~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 341 (427)
++++.++.+|++..+++++|||++||... ...+.+..+++++++.+.+++|+.+... ++.+
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~-------------~~~~----- 66 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK-------------PDTL----- 66 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC-------------CTTC-----
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC-------------cccC-----
Confidence 45789999999877677899999999963 4677888999999998999999987541 1111
Q ss_pred cCCCcEEeccccchHhhhcccCcceeeccCChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEec
Q 035495 342 EIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 342 ~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
+.|+.+.+|+||.+++.|++.++||||||+||++||+++|+|+|++|...||..||.++++ .|+|+.++.
T Consensus 67 --~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~ 136 (170)
T 2o6l_A 67 --GLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF 136 (170)
T ss_dssp --CTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT
T ss_pred --CCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc
Confidence 5689999999999999665555999999999999999999999999999999999999999 599999986
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.79 E-value=1e-17 Score=159.14 Aligned_cols=291 Identities=15% Similarity=0.137 Sum_probs=175.6
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcch--HHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCC
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNI--QYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPP 82 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~--~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 82 (427)
+|||++++.+..||..+.+.||++|++ +||+|++++..... ..+.. .++++..++.. .+..
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~------------~g~~~~~~~~~----~~~~ 68 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMA-QGWQVRWLGTADRMEADLVPK------------HGIEIDFIRIS----GLRG 68 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHT-TTCEEEEEECTTSTHHHHGGG------------GTCEEEECCCC----CCTT
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHH-cCCEEEEEecCCcchhhhccc------------cCCceEEecCC----ccCc
Confidence 389999998888999999999999999 99999999976532 23333 46788766642 2211
Q ss_pred CCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCc--chHHHHHHHhCCceEEEecchHHHHHH
Q 035495 83 NTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFF--GWAVDVAKSAGSTNVTFATGGAYVTLA 160 (427)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~ 160 (427)
. . ....+....... .....+..++++.+ ||+|+++... ..+..+++.+|+|++.......
T Consensus 69 ~----~--~~~~~~~~~~~~-~~~~~l~~~l~~~~------pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~----- 130 (364)
T 1f0k_A 69 K----G--IKALIAAPLRIF-NAWRQARAIMKAYK------PDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI----- 130 (364)
T ss_dssp C----C--HHHHHTCHHHHH-HHHHHHHHHHHHHC------CSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS-----
T ss_pred C----c--cHHHHHHHHHHH-HHHHHHHHHHHhcC------CCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC-----
Confidence 1 0 000000000000 11233455566555 9999998643 3456778888999986432210
Q ss_pred HHhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCccccChhHHHHH
Q 035495 161 YTSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAEDIEPGALQWL 240 (427)
Q Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~ 240 (427)
++ . . .+++ .+.++.+++.+.. .
T Consensus 131 --------------------~~------~----~-------------~~~~------~~~~d~v~~~~~~-~-------- 152 (364)
T 1f0k_A 131 --------------------AG------L----T-------------NKWL------AKIATKVMQAFPG-A-------- 152 (364)
T ss_dssp --------------------CC------H----H-------------HHHH------TTTCSEEEESSTT-S--------
T ss_pred --------------------Cc------H----H-------------HHHH------HHhCCEEEecChh-h--------
Confidence 00 0 0 0000 1122334443221 1
Q ss_pred HhcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhC--CCcEEEEEcCC
Q 035495 241 RNYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEAS--AKSFLWVITPP 318 (427)
Q Consensus 241 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~ 318 (427)
++ ++..+|+..... .... +.. .+.+...+++++|++..|+... ......++++++.. +.++++.++..
T Consensus 153 ---~~-~~~~i~n~v~~~--~~~~-~~~-~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~ 222 (364)
T 1f0k_A 153 ---FP-NAEVVGNPVRTD--VLAL-PLP-QQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKG 222 (364)
T ss_dssp ---SS-SCEECCCCCCHH--HHTS-CCH-HHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTT
T ss_pred ---cC-CceEeCCccchh--hccc-chh-hhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 22 455666544321 0000 011 1112222345678888888753 34445566666654 46666777765
Q ss_pred CCCCcchhhhccCCchhHHHHhccC-CCcEEeccccc-hHhhhcccCcceeeccCChhhHHHHHhcCCcEEeccCc---c
Q 035495 319 VGFDLRAEFRSEWLPEGFEERIKEI-KQGLLVRNWAP-QLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPIA---A 393 (427)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~vp-q~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~---~ 393 (427)
. .+.+.+...+. -.+|.+.+|++ -..+++.++ ++|+++|.+++.||+++|+|+|+.|.. .
T Consensus 223 ~-------------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~ 287 (364)
T 1f0k_A 223 S-------------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVPFQHKDR 287 (364)
T ss_dssp C-------------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECCCCCTTC
T ss_pred h-------------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEeeCCCCch
Confidence 2 12232222111 24788889995 478999999 799999999999999999999999987 7
Q ss_pred cchhhHHHHHhhhceeEEEec
Q 035495 394 EQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 394 DQ~~na~~v~~~lG~G~~l~~ 414 (427)
||..|+..+.+. |.|+.++.
T Consensus 288 ~q~~~~~~~~~~-g~g~~~~~ 307 (364)
T 1f0k_A 288 QQYWNALPLEKA-GAAKIIEQ 307 (364)
T ss_dssp HHHHHHHHHHHT-TSEEECCG
T ss_pred hHHHHHHHHHhC-CcEEEecc
Confidence 999999999995 99999987
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.65 E-value=3.5e-14 Score=128.33 Aligned_cols=118 Identities=10% Similarity=0.062 Sum_probs=91.2
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchH-
Q 035495 278 PASVLHISFGSQNTISSSQMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQL- 356 (427)
Q Consensus 278 ~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~- 356 (427)
+.+.|+|++|.... .+....+++++.+.. ++.+.++.+. ...+.+...... ..|+.+..|+++.
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~-----------~~~~~l~~~~~~-~~~v~v~~~~~~m~ 220 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN-----------PNLKKLQKFAKL-HNNIRLFIDHENIA 220 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC-----------TTHHHHHHHHHT-CSSEEEEESCSCHH
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc-----------hHHHHHHHHHhh-CCCEEEEeCHHHHH
Confidence 35679999997532 335667888887654 5777777652 122333332221 3489999999875
Q ss_pred hhhcccCcceeeccCChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEec
Q 035495 357 EILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 357 ~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
++++.++ ++||+|| +|++|+++.|+|+|++|...+|..||+.+++. |+++.++.
T Consensus 221 ~~m~~aD--lvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 221 KLMNESN--KLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp HHHHTEE--EEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HHHHHCC--EEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 6999999 8999999 89999999999999999999999999999995 99999886
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.61 E-value=2.4e-15 Score=130.39 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=90.4
Q ss_pred CCCeEEEEecCCcccCCHHHHHHH-----HHHHHhCC-CcEEEEEcCCCCCCcchhhhccCCchhHHHHh----------
Q 035495 277 DPASVLHISFGSQNTISSSQMMEL-----DIGLEASA-KSFLWVITPPVGFDLRAEFRSEWLPEGFEERI---------- 340 (427)
Q Consensus 277 ~~~~vV~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~---------- 340 (427)
+++++|||+.||... -.+.+..+ ++++.+.+ .++++++|.... ...+.+....
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~----------~~~~~~~~~~~~~~~~~l~p 94 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS----------SEFEHLVQERGGQRESQKIP 94 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC----------CCCCSHHHHHTCEECSCCCS
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch----------hhHHHHHHhhhccccccccc
Confidence 356789999999842 24444443 48888877 799999997631 0001110000
Q ss_pred ---------------ccCCCcEEeccccchH-hhhc-ccCcceeeccCChhhHHHHHhcCCcEEeccCc----ccchhhH
Q 035495 341 ---------------KEIKQGLLVRNWAPQL-EILS-HKSTGAFLSHCGWNSVLESLSQGLPTIGWPIA----AEQTYNS 399 (427)
Q Consensus 341 ---------------~~~~~~v~~~~~vpq~-~ll~-~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~----~DQ~~na 399 (427)
....-++.+.+|+++. ++++ .++ ++|||||+||++|++++|+|+|++|.. .||..||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA 172 (224)
T 2jzc_A 95 IDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIA 172 (224)
T ss_dssp SCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHH
T ss_pred cccccccccccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHH
Confidence 0002256677898875 7999 999 899999999999999999999999984 3699999
Q ss_pred HHHHhhhceeEEEec
Q 035495 400 KMLVEEMGVAVEMTR 414 (427)
Q Consensus 400 ~~v~~~lG~G~~l~~ 414 (427)
+++++. |+++.++.
T Consensus 173 ~~l~~~-G~~~~~~~ 186 (224)
T 2jzc_A 173 DKFVEL-GYVWSCAP 186 (224)
T ss_dssp HHHHHH-SCCCEECS
T ss_pred HHHHHC-CCEEEcCH
Confidence 999995 99998754
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.89 E-value=1.6e-07 Score=88.93 Aligned_cols=114 Identities=10% Similarity=0.140 Sum_probs=70.6
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccc
Q 035495 278 PASVLHISFGSQNTISSSQMMELDIGLEA-----SAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNW 352 (427)
Q Consensus 278 ~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~ 352 (427)
++++|+++.|...... .+..+++|++. .+.++++..+.+. .+-+.+.+.... ..+|.+.++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-----------~~~~~l~~~~~~-~~~v~~~g~ 262 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP-----------VVREAVFPVLKG-VRNFVLLDP 262 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH-----------HHHHHHHHHHTT-CTTEEEECC
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH-----------HHHHHHHHHhcc-CCCEEEECC
Confidence 3456777777653322 34556666654 2456555545330 011122222221 358888866
Q ss_pred cch---HhhhcccCcceeeccCChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEe
Q 035495 353 APQ---LEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMT 413 (427)
Q Consensus 353 vpq---~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~ 413 (427)
+++ ..+++.++ +||+.+| |.+.||+++|+|+|+.+..+++.. +.+. |.|+.++
T Consensus 263 ~g~~~~~~~~~~ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~ 318 (376)
T 1v4v_A 263 LEYGSMAALMRASL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG 318 (376)
T ss_dssp CCHHHHHHHHHTEE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC
T ss_pred CCHHHHHHHHHhCc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC
Confidence 554 57899999 7888874 446699999999999987777666 3454 8888875
No 26
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.88 E-value=3.7e-07 Score=88.10 Aligned_cols=64 Identities=8% Similarity=-0.022 Sum_probs=45.4
Q ss_pred CCcEEeccccchHh---hhcccCcceeecc----CChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEecC
Q 035495 344 KQGLLVRNWAPQLE---ILSHKSTGAFLSH----CGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMTRG 415 (427)
Q Consensus 344 ~~~v~~~~~vpq~~---ll~~~~v~~~I~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~ 415 (427)
+.++.+.+|+|+.+ ++..+++ +|.- |-.+++.||+++|+|+|+.. .......+. . |.|+.++.+
T Consensus 310 ~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~----~~~~~e~~~-~-~~g~~~~~~ 380 (439)
T 3fro_A 310 GNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDIIT-N-ETGILVKAG 380 (439)
T ss_dssp TTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEES----STHHHHHCC-T-TTCEEECTT
T ss_pred CCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcC----CCCcceeEE-c-CceEEeCCC
Confidence 45677789999754 6788884 5532 33479999999999999965 344444444 3 788888763
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.81 E-value=6.1e-07 Score=86.74 Aligned_cols=64 Identities=9% Similarity=0.021 Sum_probs=48.1
Q ss_pred CCcEEeccccch---HhhhcccCcceeecc----CChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEec
Q 035495 344 KQGLLVRNWAPQ---LEILSHKSTGAFLSH----CGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 344 ~~~v~~~~~vpq---~~ll~~~~v~~~I~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
..+|.+.+|+|+ ..++..+++ +|.- |..+++.||+++|+|+|+.+ .......+.+. +.|+.++.
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~~~ 375 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAAR----VGGLPIAVAEG-ETGLLVDG 375 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEES----CTTHHHHSCBT-TTEEEESS
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecC----CCChhHHhhCC-CcEEECCC
Confidence 468999999986 457888994 5543 33568999999999999975 34566667664 77888876
No 28
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.78 E-value=6.1e-07 Score=85.26 Aligned_cols=294 Identities=9% Similarity=-0.008 Sum_probs=151.1
Q ss_pred CCcEEEEeCC--C--CccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCC
Q 035495 4 ENEHIGMLPL--M--AHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHG 79 (427)
Q Consensus 4 ~~~~il~~~~--p--~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 79 (427)
++|||++++. + ..|.-.-+..|+++| + ||+|++++............. . .++++..++.. ..
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L-~--g~~v~v~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~---~~ 68 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ-D--PESIVVFASTQNAEEAHAYDK-T-------LDYEVIRWPRS---VM 68 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS-C--GGGEEEEEECSSHHHHHHHHT-T-------CSSEEEEESSS---SC
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh-c--CCeEEEEECCCCccchhhhcc-c-------cceEEEEcccc---cc
Confidence 5689999874 3 467777788888888 4 999999997665432111110 0 56777766631 00
Q ss_pred CCCCCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcc--hHHHHHHHhCCceEEE-ecchHH
Q 035495 80 LPPNTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFG--WAVDVAKSAGSTNVTF-ATGGAY 156 (427)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~--~~~~~A~~lgiP~v~~-~~~~~~ 156 (427)
+ .. .. ....+..++++.+ +|+|++....+ ....+++++|+|.+.+ ......
T Consensus 69 ~----------~~---~~-------~~~~l~~~~~~~~------~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~ 122 (394)
T 3okp_A 69 L----------PT---PT-------TAHAMAEIIRERE------IDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV 122 (394)
T ss_dssp C----------SC---HH-------HHHHHHHHHHHTT------CSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH
T ss_pred c----------cc---hh-------hHHHHHHHHHhcC------CCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh
Confidence 0 00 00 1223455566555 99999764333 3456688899985443 322111
Q ss_pred HHHHHHhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCccccChhH
Q 035495 157 VTLAYTSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAEDIEPGA 236 (427)
Q Consensus 157 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 236 (427)
.. .. .. . ..... ....+.++.+++.+-..
T Consensus 123 ~~-------~~---------------------~~---~------------~~~~~---~~~~~~~d~ii~~s~~~----- 151 (394)
T 3okp_A 123 GW-------SM---------------------LP---G------------SRQSL---RKIGTEVDVLTYISQYT----- 151 (394)
T ss_dssp HH-------TT---------------------SH---H------------HHHHH---HHHHHHCSEEEESCHHH-----
T ss_pred hh-------hh---------------------cc---h------------hhHHH---HHHHHhCCEEEEcCHHH-----
Confidence 00 00 00 0 00001 11123455666665422
Q ss_pred HHHHHhcC--CCCEEEeCccCCCCCCCCCC-Cc---hhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHh----
Q 035495 237 LQWLRNYI--KLPVWAIGPLLPQSYLKKSK-NP---EKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEA---- 306 (427)
Q Consensus 237 ~~~~~~~~--~~~~~~vGp~~~~~~~~~~~-~~---~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~---- 306 (427)
.+.+...+ ..++..+.+..... ...+ .+ ..+.+-+... +...+++..|+... ...+..++++++.
T Consensus 152 ~~~~~~~~~~~~~~~vi~ngv~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~ 226 (394)
T 3okp_A 152 LRRFKSAFGSHPTFEHLPSGVDVK--RFTPATPEDKSATRKKLGFT-DTTPVIACNSRLVP--RKGQDSLIKAMPQVIAA 226 (394)
T ss_dssp HHHHHHHHCSSSEEEECCCCBCTT--TSCCCCHHHHHHHHHHTTCC-TTCCEEEEESCSCG--GGCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCeEEecCCcCHH--HcCCCCchhhHHHHHhcCCC-cCceEEEEEecccc--ccCHHHHHHHHHHHHhh
Confidence 12222222 24666666555432 1111 11 1222222222 23346666777643 2223444444433
Q ss_pred -CCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHh---hhcccCcceeec-----------cC
Q 035495 307 -SAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLE---ILSHKSTGAFLS-----------HC 371 (427)
Q Consensus 307 -~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~---ll~~~~v~~~I~-----------Hg 371 (427)
.+.++++. |.+. ..+.+.........++.+.+|+|+.+ ++..++ ++|. -|
T Consensus 227 ~~~~~l~i~-G~g~------------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad--~~v~ps~~~~~~~~~e~ 291 (394)
T 3okp_A 227 RPDAQLLIV-GSGR------------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAAD--IFAMPARTRGGGLDVEG 291 (394)
T ss_dssp STTCEEEEE-CCCT------------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCS--EEEECCCCBGGGTBCCS
T ss_pred CCCeEEEEE-cCch------------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCC--EEEecCccccccccccc
Confidence 25555544 4331 22222222222246899999998654 677888 4664 45
Q ss_pred ChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEec
Q 035495 372 GWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 372 G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
..+++.||+++|+|+|+.+.. .....+.+ |.|+.++.
T Consensus 292 ~~~~~~Ea~a~G~PvI~~~~~----~~~e~i~~--~~g~~~~~ 328 (394)
T 3okp_A 292 LGIVYLEAQACGVPVIAGTSG----GAPETVTP--ATGLVVEG 328 (394)
T ss_dssp SCHHHHHHHHTTCCEEECSST----TGGGGCCT--TTEEECCT
T ss_pred cCcHHHHHHHcCCCEEEeCCC----ChHHHHhc--CCceEeCC
Confidence 567999999999999997753 22223333 46666665
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.74 E-value=3.7e-07 Score=86.68 Aligned_cols=116 Identities=11% Similarity=0.115 Sum_probs=71.1
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccc
Q 035495 278 PASVLHISFGSQNTISSSQMMELDIGLEA-----SAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNW 352 (427)
Q Consensus 278 ~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~ 352 (427)
++++|+++.|...... +.+..+++|++. .+.++++..+.+. .+.+.+.+.... ..+|.+.++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~-----------~~~~~l~~~~~~-~~~v~~~g~ 270 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP-----------NVREPVNRILGH-VKNVILIDP 270 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH-----------HHHHHHHHHHTT-CTTEEEECC
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH-----------HHHHHHHHHhhc-CCCEEEeCC
Confidence 4567888888765432 234455555543 2455555434220 011122222121 358888676
Q ss_pred cch---HhhhcccCcceeeccCChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEec
Q 035495 353 APQ---LEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 353 vpq---~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
+++ ..+++.++ +||+.+| +.+.||+++|+|+|+.+..+++. .+.+. |.|+.++.
T Consensus 271 ~~~~~~~~~~~~ad--~~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~----e~v~~-g~g~lv~~ 327 (384)
T 1vgv_A 271 QEYLPFVWLMNHAW--LILTDSG-GIQEEAPSLGKPVLVMRDTTERP----EAVTA-GTVRLVGT 327 (384)
T ss_dssp CCHHHHHHHHHHCS--EEEESSS-TGGGTGGGGTCCEEEESSCCSCH----HHHHH-TSEEEECS
T ss_pred CCHHHHHHHHHhCc--EEEECCc-chHHHHHHcCCCEEEccCCCCcc----hhhhC-CceEEeCC
Confidence 664 56788999 6888875 44889999999999998754443 34565 89988865
No 30
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.73 E-value=1.4e-06 Score=83.17 Aligned_cols=65 Identities=6% Similarity=0.087 Sum_probs=49.4
Q ss_pred CCcEEeccccchH---hhhcccCcceeec----cCCh-hhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEecC
Q 035495 344 KQGLLVRNWAPQL---EILSHKSTGAFLS----HCGW-NSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMTRG 415 (427)
Q Consensus 344 ~~~v~~~~~vpq~---~ll~~~~v~~~I~----HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~ 415 (427)
..++.+.+++++. .++..+++ +|. +.|+ +++.||+++|+|+|+.+. ......+.+. +.|+.++.+
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~~ 334 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPVD 334 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCTT
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCCC
Confidence 4689999999974 78889995 542 3344 589999999999999764 5666777764 788888653
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.70 E-value=7.3e-07 Score=85.09 Aligned_cols=116 Identities=11% Similarity=0.123 Sum_probs=69.8
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccc
Q 035495 278 PASVLHISFGSQNTISSSQMMELDIGLEA-----SAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNW 352 (427)
Q Consensus 278 ~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~ 352 (427)
++++|+++.+-..+.... +..+++|++. .+.++++..+.+. . +-+.+.+... ...++.+.++
T Consensus 229 ~~~~vlv~~hR~~~~~~~-~~~ll~A~~~l~~~~~~~~~v~~~g~~~------~-----~~~~l~~~~~-~~~~v~~~~~ 295 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGGG-FERICQALITTAEQHPECQILYPVHLNP------N-----VREPVNKLLK-GVSNIVLIEP 295 (396)
T ss_dssp TSEEEEEECSCBCCCTTH-HHHHHHHHHHHHHHCTTEEEEEECCBCH------H-----HHHHHHHHTT-TCTTEEEECC
T ss_pred CCCEEEEEECCcccchhH-HHHHHHHHHHHHHhCCCceEEEEeCCCh------H-----HHHHHHHHHc-CCCCEEEeCC
Confidence 466777776332222222 4566666654 3566666555321 0 1111111111 1457888777
Q ss_pred cc---hHhhhcccCcceeeccCChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEec
Q 035495 353 AP---QLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 353 vp---q~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
++ ...+++.++ ++|+-.| |.+.||.++|+|+|+..-..+++ .+.+. |.++.+..
T Consensus 296 lg~~~~~~l~~~ad--~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~~ 352 (396)
T 3dzc_A 296 QQYLPFVYLMDRAH--IILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVGT 352 (396)
T ss_dssp CCHHHHHHHHHHCS--EEEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECTT
T ss_pred CCHHHHHHHHHhcC--EEEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcCC
Confidence 64 457888999 7999887 55579999999999986555553 24565 88876654
No 32
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.69 E-value=1.9e-07 Score=87.25 Aligned_cols=111 Identities=16% Similarity=0.136 Sum_probs=69.0
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchH---hh
Q 035495 282 LHISFGSQNTISSSQMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQL---EI 358 (427)
Q Consensus 282 V~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~---~l 358 (427)
+++..|+.. .......++++++..+.++++. |... ..+.+.+.......+|.+.+|+++. .+
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~------------~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~ 228 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW------------EPEYFDEITRRYGSTVEPIGEVGGERRLDL 228 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC------------CHHHHHHHHHHHTTTEEECCCCCHHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc------------cHHHHHHHHHHhCCCEEEeccCCHHHHHHH
Confidence 344456654 2345667777887777776554 5431 1122222111113689999999975 78
Q ss_pred hcccCcceee--cc-----------CC-hhhHHHHHhcCCcEEeccCcccchhhHHHHHh--hhceeEEEec
Q 035495 359 LSHKSTGAFL--SH-----------CG-WNSVLESLSQGLPTIGWPIAAEQTYNSKMLVE--EMGVAVEMTR 414 (427)
Q Consensus 359 l~~~~v~~~I--~H-----------gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~--~lG~G~~l~~ 414 (427)
+..+++ +| +. -| .+++.||+++|+|+|+... ..+...+++ . +.|+.++.
T Consensus 229 ~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~ 293 (342)
T 2iuy_A 229 LASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF 293 (342)
T ss_dssp HHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC
T ss_pred HHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC
Confidence 888995 55 22 33 4689999999999999775 345555655 3 45655553
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.67 E-value=6e-07 Score=85.88 Aligned_cols=117 Identities=9% Similarity=0.056 Sum_probs=70.7
Q ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEecc
Q 035495 277 DPASVLHISFGSQNTISSSQMMELDIGLEA-----SAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRN 351 (427)
Q Consensus 277 ~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~ 351 (427)
+++++++++.|....... .+..+++|++. .+.++++..+.+. .+-+.+.+... ...++.+.+
T Consensus 222 ~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~-----------~~~~~l~~~~~-~~~~v~l~~ 288 (403)
T 3ot5_A 222 GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLNP-----------AVREKAMAILG-GHERIHLIE 288 (403)
T ss_dssp TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCH-----------HHHHHHHHHHT-TCTTEEEEC
T ss_pred cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCCH-----------HHHHHHHHHhC-CCCCEEEeC
Confidence 346678887664322221 24555555543 3556666655431 01111111111 145888889
Q ss_pred ccc---hHhhhcccCcceeeccCChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEec
Q 035495 352 WAP---QLEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 352 ~vp---q~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
+++ ...+++.++ ++|+-.|..+ .||.++|+|+|++|-.++++. +.+. |.|+.+..
T Consensus 289 ~l~~~~~~~l~~~ad--~vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~ 346 (403)
T 3ot5_A 289 PLDAIDFHNFLRKSY--LVFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT 346 (403)
T ss_dssp CCCHHHHHHHHHHEE--EEEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS
T ss_pred CCCHHHHHHHHHhcC--EEEECCccHH-HHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC
Confidence 886 356888899 7888875322 699999999999976666654 3465 98887764
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.55 E-value=3.4e-06 Score=79.64 Aligned_cols=116 Identities=9% Similarity=0.074 Sum_probs=67.5
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccc
Q 035495 278 PASVLHISFGSQNTISSSQMMELDIGLEAS-----AKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNW 352 (427)
Q Consensus 278 ~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~ 352 (427)
++++++++.|...... ..+..+++|++.. +.++++ +.+. + ..+-+.+.+... ...++.+.++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~------~---~~~~~~~~~~~~-~~~~v~~~g~ 270 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHM------N---PVVRETANDILG-DYGRIHLIEP 270 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCS------C---HHHHHHHHHHHT-TCTTEEEECC
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCC------C---HHHHHHHHHHhh-ccCCEEEeCC
Confidence 4566777777654322 3345566666542 445444 3221 0 001111111111 1368888777
Q ss_pred cch---HhhhcccCcceeeccCChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEec
Q 035495 353 APQ---LEILSHKSTGAFLSHCGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 353 vpq---~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
+++ ..+++.++ +||+..| +.+.||+++|+|+|+....+... .+.+. |.|+.++.
T Consensus 271 ~~~~~~~~~~~~ad--~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~-g~g~~v~~ 327 (375)
T 3beo_A 271 LDVIDFHNVAARSY--LMLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEA-GTLKLAGT 327 (375)
T ss_dssp CCHHHHHHHHHTCS--EEEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHT-TSEEECCS
T ss_pred CCHHHHHHHHHhCc--EEEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecC-CceEEcCC
Confidence 765 46788888 6888763 45889999999999985433332 24554 88888764
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.49 E-value=4.1e-06 Score=82.52 Aligned_cols=65 Identities=14% Similarity=0.031 Sum_probs=47.2
Q ss_pred CCcEEeccccchH---hhhccc----Ccceeecc----CChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEE
Q 035495 344 KQGLLVRNWAPQL---EILSHK----STGAFLSH----CGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEM 412 (427)
Q Consensus 344 ~~~v~~~~~vpq~---~ll~~~----~v~~~I~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l 412 (427)
..+|.+.+++|+. .++..+ + ++|.- |-..++.||+++|+|+|+.. .......+.+. +.|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~d--v~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGS--VFALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTC--EEEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCC--EEEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcCC-ceEEEe
Confidence 4679999999864 467788 8 45532 33468999999999999975 34566666663 688888
Q ss_pred ecC
Q 035495 413 TRG 415 (427)
Q Consensus 413 ~~~ 415 (427)
+.+
T Consensus 407 ~~~ 409 (499)
T 2r60_A 407 DPE 409 (499)
T ss_dssp CTT
T ss_pred CCC
Confidence 763
No 36
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.43 E-value=0.00023 Score=67.53 Aligned_cols=302 Identities=11% Similarity=0.052 Sum_probs=149.5
Q ss_pred CCcEEEEeCCCCc-cCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCC
Q 035495 4 ENEHIGMLPLMAH-GHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPP 82 (427)
Q Consensus 4 ~~~~il~~~~p~~-GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 82 (427)
.++++....+|.. |.-.-...|+++|++ +||+|++++....... .. .. .++.+..++.. ..+.
T Consensus 14 ~~~~~~~~~~p~~GG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~-~~-----~~-----~~i~~~~~~~~----~~~~ 77 (394)
T 2jjm_A 14 MKLKIGITCYPSVGGSGVVGTELGKQLAE-RGHEIHFITSGLPFRL-NK-----VY-----PNIYFHEVTVN----QYSV 77 (394)
T ss_dssp -CCEEEEECCC--CHHHHHHHHHHHHHHH-TTCEEEEECSSCC-----C-----CC-----TTEEEECCCCC--------
T ss_pred heeeeehhcCCCCCCHHHHHHHHHHHHHh-CCCEEEEEeCCCCCcc-cc-----cC-----CceEEEecccc----cccc
Confidence 3577888887754 566778899999999 9999999987532211 11 01 56777755532 1110
Q ss_pred CCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcch--HHHHHHHh---CCceEEEecchHHH
Q 035495 83 NTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFGW--AVDVAKSA---GSTNVTFATGGAYV 157 (427)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~--~~~~A~~l---giP~v~~~~~~~~~ 157 (427)
...... . ..+ ...+..++++.+ ||+|++...... ...++..+ ++|++.........
T Consensus 78 ----~~~~~~-~-~~~-------~~~l~~~l~~~~------~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~ 138 (394)
T 2jjm_A 78 ----FQYPPY-D-LAL-------ASKMAEVAQREN------LDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT 138 (394)
T ss_dssp ----CCSCCH-H-HHH-------HHHHHHHHHHHT------CSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH
T ss_pred ----cccccc-c-HHH-------HHHHHHHHHHcC------CCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc
Confidence 000000 0 011 223455666655 999998754332 23344443 59988765442110
Q ss_pred HHHHHhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCccccChhHH
Q 035495 158 TLAYTSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAEDIEPGAL 237 (427)
Q Consensus 158 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 237 (427)
... ... . +..... ...+.++.+++.+-. ..
T Consensus 139 ---------~~~-------------~~~---~-----------------~~~~~~---~~~~~ad~ii~~s~~-----~~ 168 (394)
T 2jjm_A 139 ---------VLG-------------SDP---S-----------------LNNLIR---FGIEQSDVVTAVSHS-----LI 168 (394)
T ss_dssp ---------TTT-------------TCT---T-----------------THHHHH---HHHHHSSEEEESCHH-----HH
T ss_pred ---------ccC-------------CCH---H-----------------HHHHHH---HHHhhCCEEEECCHH-----HH
Confidence 000 000 0 000001 112345566665542 22
Q ss_pred HHHHhcC--CCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHh----CCCcE
Q 035495 238 QWLRNYI--KLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEA----SAKSF 311 (427)
Q Consensus 238 ~~~~~~~--~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~----~~~~~ 311 (427)
+.+...+ +.++..+........ ..+.....+.+-+... +...+++..|+... ...+..+++|++. .+.++
T Consensus 169 ~~~~~~~~~~~~~~vi~ngv~~~~-~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l 244 (394)
T 2jjm_A 169 NETHELVKPNKDIQTVYNFIDERV-YFKRDMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKL 244 (394)
T ss_dssp HHHHHHTCCSSCEEECCCCCCTTT-CCCCCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEE
T ss_pred HHHHHhhCCcccEEEecCCccHHh-cCCcchHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEE
Confidence 2233322 246777766554321 1111122222222211 12235556677643 2233444444443 34444
Q ss_pred EEEEcCCCCCCcchhhhccCCchhHHHHhc--cCCCcEEeccccch-HhhhcccCcceee----ccCChhhHHHHHhcCC
Q 035495 312 LWVITPPVGFDLRAEFRSEWLPEGFEERIK--EIKQGLLVRNWAPQ-LEILSHKSTGAFL----SHCGWNSVLESLSQGL 384 (427)
Q Consensus 312 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~~~~vpq-~~ll~~~~v~~~I----~HgG~~s~~eal~~Gv 384 (427)
+.+|.+. ..+.+..... ....+|.+.++..+ ..++..++ ++| .-|..+++.||+++|+
T Consensus 245 -~i~G~g~------------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~ 309 (394)
T 2jjm_A 245 -LLVGDGP------------EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSD--LMLLLSEKESFGLVLLEAMACGV 309 (394)
T ss_dssp -EEECCCT------------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCS--EEEECCSCCSCCHHHHHHHHTTC
T ss_pred -EEECCch------------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCC--EEEeccccCCCchHHHHHHhcCC
Confidence 4445431 1122222222 11357777787553 67888999 566 4456679999999999
Q ss_pred cEEeccCcccchhhHHHHHhhhceeEEEec
Q 035495 385 PTIGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 385 P~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
|+|+.+.. .....+.+. +.|+.++.
T Consensus 310 PvI~~~~~----~~~e~v~~~-~~g~~~~~ 334 (394)
T 2jjm_A 310 PCIGTRVG----GIPEVIQHG-DTGYLCEV 334 (394)
T ss_dssp CEEEECCT----TSTTTCCBT-TTEEEECT
T ss_pred CEEEecCC----ChHHHhhcC-CceEEeCC
Confidence 99997753 333344443 56777765
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.31 E-value=1.4e-05 Score=75.16 Aligned_cols=112 Identities=15% Similarity=0.226 Sum_probs=71.7
Q ss_pred eEEEEecCCcccCCHHHHHHHHHHHHhCCCc-----EEEEEcCCCCCCcchhhhccCCchhHHHHhc--cCCCcEEeccc
Q 035495 280 SVLHISFGSQNTISSSQMMELDIGLEASAKS-----FLWVITPPVGFDLRAEFRSEWLPEGFEERIK--EIKQGLLVRNW 352 (427)
Q Consensus 280 ~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~-----~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~~~~ 352 (427)
..+++..|+... ...+..++++++....+ -++.+|.+. .+.+..... ....++.+.++
T Consensus 196 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~-------------~~~~~~~~~~~~~~~~v~~~g~ 260 (374)
T 2iw1_A 196 QNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK-------------PRKFEALAEKLGVRSNVHFFSG 260 (374)
T ss_dssp CEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC-------------CHHHHHHHHHHTCGGGEEEESC
T ss_pred CeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC-------------HHHHHHHHHHcCCCCcEEECCC
Confidence 346666776643 33456667777765322 344455431 122222111 11468888888
Q ss_pred cch-HhhhcccCcceeec----cCChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEe
Q 035495 353 APQ-LEILSHKSTGAFLS----HCGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMT 413 (427)
Q Consensus 353 vpq-~~ll~~~~v~~~I~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~ 413 (427)
..+ ..++..++ ++|. -|..+++.||+++|+|+|+... ..++..+++. +.|+.++
T Consensus 261 ~~~~~~~~~~ad--~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~ 319 (374)
T 2iw1_A 261 RNDVSELMAAAD--LLLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIA 319 (374)
T ss_dssp CSCHHHHHHHCS--EEEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEEC
T ss_pred cccHHHHHHhcC--EEEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeC
Confidence 654 66888899 4664 4567899999999999999764 4566778885 8999987
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.24 E-value=7.6e-05 Score=70.66 Aligned_cols=301 Identities=16% Similarity=0.113 Sum_probs=153.2
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchH-HhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCCC
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQ-YLQNTISSANPNSPEKFNINLVELPFCSSDHGLPPN 83 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~-~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 83 (427)
++++++ -.+++-.+.=+-+|.++|.+ + +++.++.+....+ .+...-. .++.+ +.++ ..+..+
T Consensus 9 ~~~~~~-v~GtRpe~~k~~p~~~~l~~-~-~~~~~~~tgqh~~~~~~~~~~---------~~~~i---~~~~--~~l~~~ 71 (385)
T 4hwg_A 9 MLKVMT-IVGTRPELIKLCCVISEFDK-H-TKHILVHTGQNYAYELNQVFF---------DDMGI---RKPD--YFLEVA 71 (385)
T ss_dssp CCEEEE-EECSHHHHHHHHHHHHHHHH-H-SEEEEEECSCHHHHHHTHHHH---------C-CCC---CCCS--EECCCC
T ss_pred hhheeE-EEEcCHhHHHHHHHHHHHHh-c-CCEEEEEeCCCCChhHHHHHH---------hhCCC---CCCc--eecCCC
Confidence 345544 46788888889999999999 7 9988888776654 3333111 22222 1110 011111
Q ss_pred CCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEe--cCCcchHHHHHHHhCCceEEEecchHHHHHHH
Q 035495 84 TENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIIT--DTFFGWAVDVAKSAGSTNVTFATGGAYVTLAY 161 (427)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~--D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 161 (427)
.... .+........+.+++++.+ ||+|++ |....++..+|.++|||++-+....
T Consensus 72 ---~~~~--------~~~~~~~~~~l~~~l~~~k------PD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl------- 127 (385)
T 4hwg_A 72 ---ADNT--------AKSIGLVIEKVDEVLEKEK------PDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN------- 127 (385)
T ss_dssp ---CCCS--------HHHHHHHHHHHHHHHHHHC------CSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC-------
T ss_pred ---CCCH--------HHHHHHHHHHHHHHHHhcC------CcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC-------
Confidence 1111 1111223455678888877 999885 4445555788889999976543110
Q ss_pred HhhhhcCCCCCCCCCCCCCCCCCCCcccchhccchhhhhcCCCCchhhhhhhhhhcccccceEEEcCccccChhHHHHHH
Q 035495 162 TSMWLNLPQKKTNSDEFTLPGFPERCHFHITQLHKYLRMAGGSDDWSKFMQPNITQSFESYGMLCNTAEDIEPGALQWLR 241 (427)
Q Consensus 162 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~ 241 (427)
. . ... .++... . +.... ..++.+++.+-. .-+.+.
T Consensus 128 ----------r-----------s----~~~-~~pee~---------n---R~~~~--~~a~~~~~~te~-----~~~~l~ 162 (385)
T 4hwg_A 128 ----------R-----------C----FDQ-RVPEEI---------N---RKIID--HISDVNITLTEH-----ARRYLI 162 (385)
T ss_dssp ----------C-----------C----SCT-TSTHHH---------H---HHHHH--HHCSEEEESSHH-----HHHHHH
T ss_pred ----------c-----------c----ccc-cCcHHH---------H---HHHHH--hhhceeecCCHH-----HHHHHH
Confidence 0 0 000 001000 0 00000 112223333321 111121
Q ss_pred h-cC-CCCEEEeCccCCCCCCC--CCCCchhhhhhccCCCCCeEEEEecCCcccCC-HHHHHHHHHHHHhC----CCcEE
Q 035495 242 N-YI-KLPVWAIGPLLPQSYLK--KSKNPEKIIEWLDLHDPASVLHISFGSQNTIS-SSQMMELDIGLEAS----AKSFL 312 (427)
Q Consensus 242 ~-~~-~~~~~~vGp~~~~~~~~--~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~-~~~~~~~~~a~~~~----~~~~i 312 (427)
. -. +.+++.+|....+.... ......++.+-+.-. ++++|+++.|...... .+.+..+++|+.+. +..+|
T Consensus 163 ~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv 241 (385)
T 4hwg_A 163 AEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLII 241 (385)
T ss_dssp HTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEE
T ss_pred HcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEE
Confidence 1 11 13577788433221000 000011222223222 3568888888764433 24566777777653 56777
Q ss_pred EEEcCCCCCCcchhhhccCCchhHHHHh---ccCCCcEEeccccc---hHhhhcccCcceeeccCChhhHHHHHhcCCcE
Q 035495 313 WVITPPVGFDLRAEFRSEWLPEGFEERI---KEIKQGLLVRNWAP---QLEILSHKSTGAFLSHCGWNSVLESLSQGLPT 386 (427)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~v~~~~~vp---q~~ll~~~~v~~~I~HgG~~s~~eal~~GvP~ 386 (427)
+...+. +.+.+ ++. .....++.+.+.++ ...++++++ ++|+-.|. .+.||.+.|+|+
T Consensus 242 ~p~~p~-------------~~~~l-~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~ad--lvvt~SGg-v~~EA~alG~Pv 304 (385)
T 4hwg_A 242 FSTHPR-------------TKKRL-EDLEGFKELGDKIRFLPAFSFTDYVKLQMNAF--CILSDSGT-ITEEASILNLPA 304 (385)
T ss_dssp EEECHH-------------HHHHH-HTSGGGGGTGGGEEECCCCCHHHHHHHHHHCS--EEEECCTT-HHHHHHHTTCCE
T ss_pred EECChH-------------HHHHH-HHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCc--EEEECCcc-HHHHHHHcCCCE
Confidence 765421 00101 111 00135777766554 457899999 78888775 468999999999
Q ss_pred EeccCcccchhhHHHHHhhhceeEEEec
Q 035495 387 IGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 387 v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
|.++...+.+. ..+. |.++.+..
T Consensus 305 v~~~~~ter~e----~v~~-G~~~lv~~ 327 (385)
T 4hwg_A 305 LNIREAHERPE----GMDA-GTLIMSGF 327 (385)
T ss_dssp EECSSSCSCTH----HHHH-TCCEECCS
T ss_pred EEcCCCccchh----hhhc-CceEEcCC
Confidence 99987554332 2555 98887754
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.24 E-value=0.00026 Score=67.58 Aligned_cols=63 Identities=14% Similarity=0.049 Sum_probs=45.9
Q ss_pred CCcEEeccccc---h---HhhhcccCcceeeccC----ChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEe
Q 035495 344 KQGLLVRNWAP---Q---LEILSHKSTGAFLSHC----GWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMT 413 (427)
Q Consensus 344 ~~~v~~~~~vp---q---~~ll~~~~v~~~I~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~ 413 (427)
..+|.+.+|++ + ..+++.++ ++|.-. ..+++.||+++|+|+|+.+. ..+...+.+. +.|+.++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad--~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASD--VILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCS--EEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCC--EEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 46899989876 2 45778888 465443 45789999999999999764 4566666663 6777775
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.96 E-value=0.001 Score=64.86 Aligned_cols=113 Identities=6% Similarity=-0.059 Sum_probs=63.2
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHh---CCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEE-eccccch--
Q 035495 282 LHISFGSQNTISSSQMMELDIGLEA---SAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLL-VRNWAPQ-- 355 (427)
Q Consensus 282 V~vs~Gs~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~-~~~~vpq-- 355 (427)
+++..|.+... .-+..+++|++. .+.++++. |.+. + .+-+.+.......+.++. +.++...
T Consensus 293 ~i~~vGrl~~~--Kg~~~li~a~~~l~~~~~~l~iv-G~g~------~----~~~~~l~~~~~~~~~~v~~~~g~~~~~~ 359 (485)
T 1rzu_A 293 LFCVISRLTWQ--KGIDLMAEAVDEIVSLGGRLVVL-GAGD------V----ALEGALLAAASRHHGRVGVAIGYNEPLS 359 (485)
T ss_dssp EEEEESCBSTT--TTHHHHHTTHHHHHHTTCEEEEE-ECBC------H----HHHHHHHHHHHHTTTTEEEEESCCHHHH
T ss_pred EEEEEccCccc--cCHHHHHHHHHHHHhcCceEEEE-eCCc------h----HHHHHHHHHHHhCCCcEEEecCCCHHHH
Confidence 66677877542 223334444433 46665554 4331 0 011222222222245776 6788333
Q ss_pred HhhhcccCcceeec----cCChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhh---------ceeEEEec
Q 035495 356 LEILSHKSTGAFLS----HCGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEM---------GVAVEMTR 414 (427)
Q Consensus 356 ~~ll~~~~v~~~I~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~l---------G~G~~l~~ 414 (427)
..+++.++ ++|. -|-..++.||+++|+|+|+... ......+.+ - +.|+.++.
T Consensus 360 ~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~ 424 (485)
T 1rzu_A 360 HLMQAGCD--AIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP 424 (485)
T ss_dssp HHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS
T ss_pred HHHHhcCC--EEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC
Confidence 25788899 4553 2335689999999999999764 344445544 2 47787776
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.90 E-value=0.0053 Score=61.08 Aligned_cols=45 Identities=22% Similarity=0.259 Sum_probs=35.8
Q ss_pred CcEEeccccchH---hhhcccCcceee---ccCChhhHHHHHhcCCcEEeccC
Q 035495 345 QGLLVRNWAPQL---EILSHKSTGAFL---SHCGWNSVLESLSQGLPTIGWPI 391 (427)
Q Consensus 345 ~~v~~~~~vpq~---~ll~~~~v~~~I---~HgG~~s~~eal~~GvP~v~~P~ 391 (427)
.+|.+.+++|+. .++..++ +|| ..|+.+++.||+++|+|+|++|-
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~~g~~~lEAma~G~Pvv~~~g 484 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHAD--LFLDTHPYNAHTTASDALWTGCPVLTTPG 484 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCC
T ss_pred hHEEeeCCCCHHHHHHHHhcCC--EEeeCCCCCCcHHHHHHHhCCCCEEeccC
Confidence 689999999854 5688888 455 12667899999999999999764
No 42
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.79 E-value=0.01 Score=56.41 Aligned_cols=58 Identities=14% Similarity=-0.014 Sum_probs=41.9
Q ss_pred CCcEEeccccchH---hhhcccCcceeec---cCC-hhhHHHHH-------hcCCcEEeccCcccchhhHHHHHhhhcee
Q 035495 344 KQGLLVRNWAPQL---EILSHKSTGAFLS---HCG-WNSVLESL-------SQGLPTIGWPIAAEQTYNSKMLVEEMGVA 409 (427)
Q Consensus 344 ~~~v~~~~~vpq~---~ll~~~~v~~~I~---HgG-~~s~~eal-------~~GvP~v~~P~~~DQ~~na~~v~~~lG~G 409 (427)
..+|.+.+++|+. .+++.+++ +|. +-| .+++.||+ ++|+|+|+... +.+. ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 5689999999865 46788884 543 334 46789999 99999999764 4443 456
Q ss_pred EE-Eec
Q 035495 410 VE-MTR 414 (427)
Q Consensus 410 ~~-l~~ 414 (427)
+. ++.
T Consensus 331 ~l~v~~ 336 (406)
T 2hy7_A 331 RFGYTP 336 (406)
T ss_dssp EEEECT
T ss_pred EEEeCC
Confidence 66 655
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.71 E-value=0.0047 Score=60.11 Aligned_cols=65 Identities=8% Similarity=-0.059 Sum_probs=43.3
Q ss_pred CCcEE-eccccch--HhhhcccCcceeecc----CChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhh---------c
Q 035495 344 KQGLL-VRNWAPQ--LEILSHKSTGAFLSH----CGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEM---------G 407 (427)
Q Consensus 344 ~~~v~-~~~~vpq--~~ll~~~~v~~~I~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~l---------G 407 (427)
+.++. +.++... ..+++.+++ +|.- |..+++.||+++|+|+|+... ..+...+.+ - +
T Consensus 346 ~~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~ 418 (485)
T 2qzs_A 346 PGQVGVQIGYHEAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVA 418 (485)
T ss_dssp TTTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCC
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-Ccccccccccc
Confidence 45775 6788433 367888994 5522 335688999999999999754 344555544 2 4
Q ss_pred eeEEEecC
Q 035495 408 VAVEMTRG 415 (427)
Q Consensus 408 ~G~~l~~~ 415 (427)
.|+.++.+
T Consensus 419 ~G~l~~~~ 426 (485)
T 2qzs_A 419 SGFVFEDS 426 (485)
T ss_dssp CBEEECSS
T ss_pred ceEEECCC
Confidence 78888763
No 44
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=97.61 E-value=0.00095 Score=68.90 Aligned_cols=65 Identities=17% Similarity=0.146 Sum_probs=44.9
Q ss_pred CCcEEecc----ccchHhhhc----ccCcceeecc----CChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEE
Q 035495 344 KQGLLVRN----WAPQLEILS----HKSTGAFLSH----CGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVE 411 (427)
Q Consensus 344 ~~~v~~~~----~vpq~~ll~----~~~v~~~I~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~ 411 (427)
..+|.+.+ ++|+.++.. .++ +||.- |-..++.||+++|+|+|+. |.......+.+. +.|+.
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaD--vfV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTC--EEEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCe--EEEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEE
Confidence 46788877 455555554 456 45532 3346999999999999995 455566666664 67888
Q ss_pred EecC
Q 035495 412 MTRG 415 (427)
Q Consensus 412 l~~~ 415 (427)
++++
T Consensus 712 v~p~ 715 (816)
T 3s28_A 712 IDPY 715 (816)
T ss_dssp ECTT
T ss_pred eCCC
Confidence 8773
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=97.25 E-value=0.0016 Score=54.11 Aligned_cols=113 Identities=9% Similarity=0.053 Sum_probs=70.0
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccch---Hh
Q 035495 282 LHISFGSQNTISSSQMMELDIGLEAS-AKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQ---LE 357 (427)
Q Consensus 282 V~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq---~~ 357 (427)
+++..|+... ...+..++++++.. +.++++. +... + ...+.+.........+.|+.+.+|+++ ..
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~-G~~~------~--~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~ 93 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIV-GWFS------K--GDHAERYARKIMKIAPDNVKFLGSVSEEELID 93 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEE-BCCC------T--TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEE-ecCc------c--HHHHHHHHHhhhcccCCcEEEeCCCCHHHHHH
Confidence 4555676642 34566778888876 5565554 4432 0 011111111001112568999999997 56
Q ss_pred hhcccCcceeec---cCCh-hhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEE
Q 035495 358 ILSHKSTGAFLS---HCGW-NSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEM 412 (427)
Q Consensus 358 ll~~~~v~~~I~---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l 412 (427)
++..+++ +|. +.|+ .++.||+++|+|+|+.. ...+...+.+. +.|+.+
T Consensus 94 ~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~ 145 (177)
T 2f9f_A 94 LYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV 145 (177)
T ss_dssp HHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE
T ss_pred HHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe
Confidence 8888994 554 3344 59999999999999975 35666667664 678877
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.21 E-value=0.12 Score=48.41 Aligned_cols=65 Identities=20% Similarity=0.269 Sum_probs=47.2
Q ss_pred cEEeccccc-hHhhhcccCcceeec--c--CChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEE
Q 035495 346 GLLVRNWAP-QLEILSHKSTGAFLS--H--CGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEM 412 (427)
Q Consensus 346 ~v~~~~~vp-q~~ll~~~~v~~~I~--H--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l 412 (427)
++++.++.. -..+++.+++ +|+. . +|..++.||+++|+|+|+-|..++.......+.+. |.++..
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv-~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~ 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI-AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE-EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC
T ss_pred cEEEECCHHHHHHHHHhCCE-EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe
Confidence 466666544 3668888884 2441 1 24478999999999999888878888877777665 887766
No 47
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.16 E-value=0.064 Score=50.66 Aligned_cols=43 Identities=12% Similarity=0.000 Sum_probs=32.2
Q ss_pred EEeccccchH---hhhcccCcceeec----cCChhhHHHHHhcCCcEEeccC
Q 035495 347 LLVRNWAPQL---EILSHKSTGAFLS----HCGWNSVLESLSQGLPTIGWPI 391 (427)
Q Consensus 347 v~~~~~vpq~---~ll~~~~v~~~I~----HgG~~s~~eal~~GvP~v~~P~ 391 (427)
+.+.+|+|+. .++..+++ +|. -|...++.||+++|+|+|+...
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~ 305 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV 305 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC
Confidence 7788999954 46778884 552 2334689999999999999653
No 48
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.92 E-value=0.028 Score=52.19 Aligned_cols=106 Identities=16% Similarity=0.046 Sum_probs=70.4
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhc-CCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCcee-EEEcCCCCCCCCCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRS-TGFKITIANTPLNIQYLQNTISSANPNSPEKFNIN-LVELPFCSSDHGLP 81 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~-~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~ 81 (427)
..+||+++-..+.|++.=..++.++|++. .+.+|++++.+.+.+.++.. +.++ ++.++..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~-----------p~vd~vi~~~~~------- 68 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN-----------PNIDELIVVDKK------- 68 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC-----------TTCSEEEEECCS-------
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC-----------CCccEEEEeCcc-------
Confidence 45799999999999999999999999983 39999999998888777652 3443 4433310
Q ss_pred CCCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCC-cEEEecCCcchHHHHHHHhCCceEE
Q 035495 82 PNTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPP-ICIITDTFFGWAVDVAKSAGSTNVT 149 (427)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-D~vI~D~~~~~~~~~A~~lgiP~v~ 149 (427)
. .. ..+. .+..+++.++. .++ |++|.=....-...++...|+|...
T Consensus 69 -~-------~~---~~~~--------~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 -G-------RH---NSIS--------GLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -S-------HH---HHHH--------HHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -c-------cc---ccHH--------HHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0 00 0111 12234444442 238 9998544444456678888998654
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.88 E-value=0.004 Score=63.87 Aligned_cols=126 Identities=15% Similarity=0.228 Sum_probs=85.7
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHh
Q 035495 278 PASVLHISFGSQNTISSSQMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLE 357 (427)
Q Consensus 278 ~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ 357 (427)
+..+||.||-.....+++.+..-.+-|++.+..++|...... .....+-. ..++...++..+++.+..|..+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~-------~~~~~l~~-~~~~~gi~~~r~~f~~~~~~~~ 592 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA-------VGEPNIQQ-YAQNMGLPQNRIIFSPVAPKEE 592 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG-------GGHHHHHH-HHHHTTCCGGGEEEEECCCHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH-------HHHHHHHH-HHHhcCCCcCeEEECCCCCHHH
Confidence 456999999999999999999999999999889999887642 00001111 1122223366788888888654
Q ss_pred ---hhcccCcceeec---cCChhhHHHHHhcCCcEEeccCcc-cchhhHHHHHhhhceeEEEec
Q 035495 358 ---ILSHKSTGAFLS---HCGWNSVLESLSQGLPTIGWPIAA-EQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 358 ---ll~~~~v~~~I~---HgG~~s~~eal~~GvP~v~~P~~~-DQ~~na~~v~~~lG~G~~l~~ 414 (427)
.+..++ +++. .+|.+|++|||..|||+|.++--. =-..-+..+.. +|+.-.+..
T Consensus 593 ~l~~~~~~D--i~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia~ 653 (723)
T 4gyw_A 593 HVRRGQLAD--VCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIAK 653 (723)
T ss_dssp HHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBCS
T ss_pred HHHHhCCCe--EEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCcccccC
Confidence 444566 6765 889999999999999999999321 12233344555 576655544
No 50
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.80 E-value=0.21 Score=45.93 Aligned_cols=46 Identities=11% Similarity=0.050 Sum_probs=40.0
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhc-CCCEEEEEeCCcchHHhhh
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRS-TGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~-~Gh~Vt~~~~~~~~~~v~~ 51 (427)
|||+++...+.|++.=..++.++|++. .+.+|++++.+...+.++.
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~ 47 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR 47 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc
Confidence 489999999999999999999999982 3999999999887776654
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=96.44 E-value=0.0094 Score=58.95 Aligned_cols=101 Identities=11% Similarity=0.047 Sum_probs=68.5
Q ss_pred eEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEE--EcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHh
Q 035495 280 SVLHISFGSQNTISSSQMMELDIGLEASAKSFLWV--ITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLE 357 (427)
Q Consensus 280 ~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ 357 (427)
.++|.||+......++.++...+-+++.+..++|. .+...+ .. ..+-+.+.. ... .+.+++.+.+|+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g--~~-----~~~~~~~~~-~GI-~~Rv~F~g~~p~~e 511 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNG--IT-----HPYVERFIK-SYL-GDSATAHPHSPYHQ 511 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCG--GG-----HHHHHHHHH-HHH-GGGEEEECCCCHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCch--hh-----HHHHHHHHH-cCC-CccEEEcCCCCHHH
Confidence 68999999988888999999888888877777774 342210 00 001111111 111 34677889998665
Q ss_pred ---hhcccCcceeec---cCChhhHHHHHhcCCcEEeccC
Q 035495 358 ---ILSHKSTGAFLS---HCGWNSVLESLSQGLPTIGWPI 391 (427)
Q Consensus 358 ---ll~~~~v~~~I~---HgG~~s~~eal~~GvP~v~~P~ 391 (427)
.+..+++ |+. .+|..|++|||.+|||+|+++-
T Consensus 512 ~la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G 549 (631)
T 3q3e_A 512 YLRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTG 549 (631)
T ss_dssp HHHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECC
T ss_pred HHHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccC
Confidence 4467884 442 3788999999999999999884
No 52
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=95.64 E-value=0.06 Score=43.53 Aligned_cols=93 Identities=14% Similarity=0.107 Sum_probs=54.8
Q ss_pred eEEEEecCCcccCCHHHHHHHHHHHHhCC--CcE-EEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchH
Q 035495 280 SVLHISFGSQNTISSSQMMELDIGLEASA--KSF-LWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQL 356 (427)
Q Consensus 280 ~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~--~~~-i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~ 356 (427)
+++++..|++.. ......+++++.... .++ ++.+|.+. ..+.+.......+.++.+ +|+|+.
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~------------~~~~~~~~~~~~~~~v~~-g~~~~~ 66 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP------------DEKKIKLLAQKLGVKAEF-GFVNSN 66 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST------------THHHHHHHHHHHTCEEEC-CCCCHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc------------cHHHHHHHHHHcCCeEEE-eecCHH
Confidence 356667777643 344566777776642 123 33344331 122232222211347888 999864
Q ss_pred ---hhhcccCcceeec----cCChhhHHHHHhcCC-cEEec
Q 035495 357 ---EILSHKSTGAFLS----HCGWNSVLESLSQGL-PTIGW 389 (427)
Q Consensus 357 ---~ll~~~~v~~~I~----HgG~~s~~eal~~Gv-P~v~~ 389 (427)
.++..+++ +|. -|...++.||+++|+ |+|+.
T Consensus 67 ~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~ 105 (166)
T 3qhp_A 67 ELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIAN 105 (166)
T ss_dssp HHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEee
Confidence 46888884 554 244569999999996 99993
No 53
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=94.27 E-value=0.47 Score=39.39 Aligned_cols=61 Identities=10% Similarity=0.033 Sum_probs=44.7
Q ss_pred cEEe-ccccch---HhhhcccCcceeecc----CChhhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEec
Q 035495 346 GLLV-RNWAPQ---LEILSHKSTGAFLSH----CGWNSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 346 ~v~~-~~~vpq---~~ll~~~~v~~~I~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 414 (427)
++.+ .+++++ ..++..+++ +|.- |...++.||+++|+|+|+... ..+...+ +. +.|+.++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~ 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC
Confidence 8888 999985 457888884 5532 224689999999999998753 4555556 53 77888875
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=89.85 E-value=0.31 Score=44.82 Aligned_cols=65 Identities=15% Similarity=0.195 Sum_probs=49.1
Q ss_pred CCcEEeccccchHhh---hcccCcceeeccCCh---------hhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEE
Q 035495 344 KQGLLVRNWAPQLEI---LSHKSTGAFLSHCGW---------NSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVE 411 (427)
Q Consensus 344 ~~~v~~~~~vpq~~l---l~~~~v~~~I~HgG~---------~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~ 411 (427)
+ ||...+|+|++++ |+.++.+++.+-+.. +-+.|++++|+|+|+.+ ...++..+++. |+|+.
T Consensus 214 ~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~ 287 (339)
T 3rhz_A 214 Q-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWI 287 (339)
T ss_dssp T-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEE
T ss_pred C-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEE
Confidence 5 9999999998775 445566455433322 35889999999999854 56788889996 99999
Q ss_pred Eec
Q 035495 412 MTR 414 (427)
Q Consensus 412 l~~ 414 (427)
++.
T Consensus 288 ~~~ 290 (339)
T 3rhz_A 288 VKD 290 (339)
T ss_dssp ESS
T ss_pred eCC
Confidence 874
No 55
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=86.64 E-value=0.43 Score=46.90 Aligned_cols=46 Identities=9% Similarity=-0.091 Sum_probs=33.1
Q ss_pred CCcEEeccccchH---hhhcccCcceeecc---CCh-hhHHHHHhcCCcEEeccC
Q 035495 344 KQGLLVRNWAPQL---EILSHKSTGAFLSH---CGW-NSVLESLSQGLPTIGWPI 391 (427)
Q Consensus 344 ~~~v~~~~~vpq~---~ll~~~~v~~~I~H---gG~-~s~~eal~~GvP~v~~P~ 391 (427)
+.++.+....++. .+++.++ +||.- =|+ .+++||+++|+|+|+...
T Consensus 381 ~~~v~~~~~~~~~~~~~~~~~aD--~~v~PS~~E~fgl~~lEAma~G~PvI~s~~ 433 (536)
T 3vue_A 381 PGKVRAVVKFNAPLAHLIMAGAD--VLAVPSRFEPCGLIQLQGMRYGTPCACAST 433 (536)
T ss_dssp TTTEEEECSCCHHHHHHHHHHCS--EEEECCSCCSSCSHHHHHHHTTCCEEECSC
T ss_pred CCceEEEEeccHHHHHHHHHhhh--eeecccccCCCCHHHHHHHHcCCCEEEcCC
Confidence 5677777777653 4678888 56542 233 589999999999998653
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=84.60 E-value=0.58 Score=44.29 Aligned_cols=64 Identities=17% Similarity=-0.041 Sum_probs=41.6
Q ss_pred CCcEEeccccchH---hhhcccCcceeecc---CCh-hhHHHHHhcCCcEEeccCcccchhhHHHHHhhhceeEEEecC
Q 035495 344 KQGLLVRNWAPQL---EILSHKSTGAFLSH---CGW-NSVLESLSQGLPTIGWPIAAEQTYNSKMLVEEMGVAVEMTRG 415 (427)
Q Consensus 344 ~~~v~~~~~vpq~---~ll~~~~v~~~I~H---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~ 415 (427)
..+|.+.+++|+. .+++.++ +||.- =|. +++.||+++|+|+|+ -..+ ....+++. ..|+.++++
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~ad--v~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~~ 364 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSS--IGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQL 364 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCC--EEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESSC
T ss_pred cCcEEEcCCCCHHHHHHHHHhCC--EEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCCC
Confidence 4578888999865 4677888 45542 133 578999999999998 3222 12233442 467777653
No 57
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=84.55 E-value=2.4 Score=39.92 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=31.7
Q ss_pred CCCcEEEEeCCC---C--ccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 3 SENEHIGMLPLM---A--HGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 3 ~~~~~il~~~~p---~--~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
.++|||++++.. . .|=......||++|++ +||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~-~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDN-KKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCT-TTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHH-cCCceEEEEecC
Confidence 357899988733 2 1444568999999999 999999999753
No 58
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=83.53 E-value=1.6 Score=36.70 Aligned_cols=48 Identities=15% Similarity=0.047 Sum_probs=41.3
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
|+ +++||++--.++.|-+. ...|.++|++ +|++|.++.++.....+..
T Consensus 1 m~-~~k~IllgvTGaiaa~k-~~~ll~~L~~-~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 1 MS-GPERITLAMTGASGAQY-GLRLLDCLVQ-EEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CC-SCSEEEEEECSSSCHHH-HHHHHHHHHH-TTCEEEEEECHHHHHHHHH
T ss_pred CC-CCCEEEEEEECHHHHHH-HHHHHHHHHH-CCCEEEEEECccHHHHHHH
Confidence 55 34689999999988888 8999999999 9999999999888877766
No 59
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=79.96 E-value=6.9 Score=33.95 Aligned_cols=44 Identities=9% Similarity=0.049 Sum_probs=29.2
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
|+|||+.-=-+. +--=+..|+++|.+ .| +|+++.+...+.-...
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~-~g-~V~VvAP~~~~Sg~g~ 44 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKS-LG-RVVVVAPDRNLSGVGH 44 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTT-TS-EEEEEEESSCCTTSCC
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHh-CC-CEEEEeeCCCCccccc
Confidence 357777763332 22337789999999 88 5999988776654443
No 60
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=79.44 E-value=6.8 Score=35.87 Aligned_cols=42 Identities=10% Similarity=-0.015 Sum_probs=35.0
Q ss_pred CCcEEEEeC-CCCccCHHHHHHHHHHHH--hcCCCEEEEEeCCcch
Q 035495 4 ENEHIGMLP-LMAHGHLIPFLALAKQIH--RSTGFKITIANTPLNI 46 (427)
Q Consensus 4 ~~~~il~~~-~p~~GH~~P~l~La~~L~--~~~Gh~Vt~~~~~~~~ 46 (427)
+.++|+|++ -++.|-..-...||..|+ + +|++|.++......
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~-~g~~vllid~D~~~ 60 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQ-PNEQFLLISTDPAH 60 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHC-TTSCEEEEECCSSC
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhc-CCCeEEEEECCCCC
Confidence 345677665 688999999999999999 9 99999999987543
No 61
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=79.01 E-value=5.4 Score=35.95 Aligned_cols=46 Identities=11% Similarity=0.058 Sum_probs=40.9
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhc-CCCEEEEEeCCcchHHhhh
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRS-TGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~-~Gh~Vt~~~~~~~~~~v~~ 51 (427)
|||+++-..+.|++.=..++.++|++. .+.+|++++.+.+.+.++.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 489999999999999999999999983 3999999999888877765
No 62
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=78.87 E-value=2.9 Score=32.53 Aligned_cols=39 Identities=15% Similarity=0.168 Sum_probs=35.1
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
++.+|++.+.++-.|-....-++..|.. +|++|.++...
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~-~G~~Vi~lG~~ 40 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTN-AGFNVVNIGVL 40 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHH-TTCEEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHH-CCCEEEECCCC
Confidence 4578999999999999999999999999 99999988753
No 63
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=76.32 E-value=9.2 Score=34.75 Aligned_cols=42 Identities=12% Similarity=-0.006 Sum_probs=35.2
Q ss_pred CcEEEEeC-CCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchH
Q 035495 5 NEHIGMLP-LMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQ 47 (427)
Q Consensus 5 ~~~il~~~-~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~ 47 (427)
+++|+|++ -++.|-..-...||..|++ +|++|.++.......
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~-~g~~vllid~D~~~~ 57 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAK-VRRSVLLLSTDPAHN 57 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTT-SSSCEEEEECCSSCH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHh-CCCcEEEEECCCCCC
Confidence 45666665 6789999999999999999 999999999876543
No 64
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=76.30 E-value=37 Score=29.26 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=29.6
Q ss_pred CCcEEEEeC--CCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 035495 4 ENEHIGMLP--LMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 4 ~~~~il~~~--~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
++++.+|++ ....|=..-.+.|++.|++ +|++|.++=
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~-~G~~V~~fK 62 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQ-AGIDVAVCK 62 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHH-CCCeEEEEe
Confidence 345555554 3467999999999999999 999999985
No 65
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=75.69 E-value=3.7 Score=38.74 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=27.0
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
|++++.||++++..-.. | .+.++.++ .|++|+++...
T Consensus 1 M~~~~k~l~Il~~~~~~---~--~i~~aa~~-lG~~vv~v~~~ 37 (425)
T 3vot_A 1 MTKRNKNLAIICQNKHL---P--FIFEEAER-LGLKVTFFYNS 37 (425)
T ss_dssp -CCCCCEEEEECCCTTC---C--HHHHHHHH-TTCEEEEEEET
T ss_pred CCCCCcEEEEECCChhH---H--HHHHHHHH-CCCEEEEEECC
Confidence 88888999999765432 1 35677888 89999998653
No 66
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=75.64 E-value=3 Score=34.90 Aligned_cols=48 Identities=19% Similarity=0.087 Sum_probs=37.0
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHh
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYL 49 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v 49 (427)
|..+++||++--.++.+=+.=.+.+.++|++ +|++|.++.++.....+
T Consensus 3 m~l~~k~I~lgiTGs~aa~~k~~~ll~~L~~-~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 3 MNFAGKHVGFGLTGSHCTYHEVLPQMERLVE-LGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp CCCTTCEEEEECCSCGGGGGGTHHHHHHHHH-TTCEEEEECSSCSCCTT
T ss_pred CCcCCCEEEEEEEChHHHHHHHHHHHHHHhh-CCCEEEEEEChhHHHHH
Confidence 5545679999888884444278999999999 99999999886555443
No 67
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=75.64 E-value=19 Score=29.50 Aligned_cols=39 Identities=23% Similarity=0.493 Sum_probs=31.8
Q ss_pred EEEEe-CCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcch
Q 035495 7 HIGML-PLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNI 46 (427)
Q Consensus 7 ~il~~-~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~ 46 (427)
.|+|+ +-++.|=..-...||..|++ +|++|.++-.....
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~-~g~~vlliD~D~~~ 42 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSR-SGYNIAVVDTDPQM 42 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCTTC
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHH-CCCeEEEEECCCCC
Confidence 34454 36788999999999999999 99999999876543
No 68
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=74.22 E-value=36 Score=28.11 Aligned_cols=39 Identities=10% Similarity=0.020 Sum_probs=34.3
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
+-.|++++..+.|-..-.+.+|.+.+. +|++|.|+..-.
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g-~G~rV~~vQF~K 66 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVG-HGKNVGVVQFIK 66 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHH-CCCeEEEEEeeC
Confidence 457899999999999999999999999 999999996543
No 69
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=73.24 E-value=4.1 Score=31.78 Aligned_cols=46 Identities=13% Similarity=0.252 Sum_probs=35.8
Q ss_pred cEEEEe--CCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhh
Q 035495 6 EHIGML--PLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNT 52 (427)
Q Consensus 6 ~~il~~--~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~ 52 (427)
|+++++ |.-..-.+.-.+-++..|.+ +||+|++++++.....++-.
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~-~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKK-KGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHHHHH
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHh-cCCeeEEecCHHHHhheecc
Confidence 555544 33455566668999999999 99999999999888888763
No 70
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=73.22 E-value=4 Score=32.73 Aligned_cols=40 Identities=13% Similarity=0.174 Sum_probs=36.2
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
++.+|++.+.++-.|-....-++..|.. +|++|.++....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~-~G~eVi~lG~~~ 56 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRD-AGFEVVYTGLRQ 56 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHH-TTCEEECCCSBC
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCCCC
Confidence 4689999999999999999999999999 999999987543
No 71
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=71.68 E-value=4.7 Score=33.51 Aligned_cols=44 Identities=9% Similarity=0.006 Sum_probs=38.2
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcC-CCEEEEEeCCcchHHhhh
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRST-GFKITIANTPLNIQYLQN 51 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~-Gh~Vt~~~~~~~~~~v~~ 51 (427)
+||++--.++.|-+. ...|.+.|++ + |++|.++.++.....+..
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~-~~g~~V~vv~T~~A~~fi~~ 45 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALRE-MPNVETHLVMSKWAKTTIEL 45 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHT-CTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHh-ccCCEEEEEECchHHHHhHH
Confidence 478888888887776 8999999999 9 999999999888777765
No 72
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=71.42 E-value=5.3 Score=32.49 Aligned_cols=44 Identities=2% Similarity=0.009 Sum_probs=37.3
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
+||++.-.++.|=+. ...+.+.|++ +|++|.++.++.....+..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~-~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKS-KFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTT-TCSEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHH-CCCEEEEEECcCHHHHhhH
Confidence 589988888877765 8899999999 9999999999887766654
No 73
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=70.03 E-value=6.8 Score=32.85 Aligned_cols=44 Identities=14% Similarity=0.026 Sum_probs=37.9
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHH
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQY 48 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~ 48 (427)
.+.+|++.+.++..|-....-++..|.. +|++|.++......+.
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~-~G~~v~~LG~~vp~~~ 130 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLES-GGFTVYNLGVDIEPGK 130 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHH-TTCEEEECCSSBCHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHH-CCCEEEECCCCCCHHH
Confidence 3568999999999999999999999999 9999999986543333
No 74
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=69.69 E-value=52 Score=28.10 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=29.4
Q ss_pred CcEEEEeC--CCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 035495 5 NEHIGMLP--LMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 5 ~~~il~~~--~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
+++.+|++ -...|=..-.+.|++.|++ +|.+|.++=
T Consensus 20 m~k~i~ItgT~t~vGKT~vs~gL~~~L~~-~G~~V~~fK 57 (242)
T 3qxc_A 20 QGHMLFISATNTNAGKTTCARLLAQYCNA-CGVKTILLK 57 (242)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHHH-TTCCEEEEC
T ss_pred cCcEEEEEeCCCCCcHHHHHHHHHHHHHh-CCCceEEEe
Confidence 44555555 3577999999999999999 999999984
No 75
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=69.16 E-value=21 Score=34.80 Aligned_cols=36 Identities=8% Similarity=0.217 Sum_probs=28.3
Q ss_pred CCcEEEEeCC--------CCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPL--------MAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~--------p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
.+|||+|+++ ++.|++ .-.|+++|++ +||+|+++++
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~-~G~~V~Vi~P 51 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAA-NGHRVMVISP 51 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHT-TTCEEEEEEE
T ss_pred CCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHH-cCCeEEEEec
Confidence 5799999973 233343 5578999999 9999999985
No 76
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=68.25 E-value=5.6 Score=33.36 Aligned_cols=47 Identities=9% Similarity=-0.027 Sum_probs=32.7
Q ss_pred CCCCCcEEEEeCCCCccCHHH-HHHHHHHHHhcCCCEEEEEeCCcchHHh
Q 035495 1 MGSENEHIGMLPLMAHGHLIP-FLALAKQIHRSTGFKITIANTPLNIQYL 49 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P-~l~La~~L~~~~Gh~Vt~~~~~~~~~~v 49 (427)
|.-+++||++.-.++ +..+- ...+.+.|++ +|++|.++.++.....+
T Consensus 1 m~l~~k~IllgiTGs-iaayk~~~~ll~~L~~-~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 1 MSLKGKRIGFGFTGS-HCTYEEVMPHLEKLIA-EGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp -CCTTCEEEEEECSC-GGGGTTSHHHHHHHHH-TTCEEEEEECC------
T ss_pred CCCCCCEEEEEEECh-HHHHHHHHHHHHHHHh-CCCEEEEEEehHHHHHH
Confidence 444557899888887 44554 7899999999 99999999987665433
No 77
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=66.93 E-value=9.1 Score=31.56 Aligned_cols=44 Identities=14% Similarity=0.145 Sum_probs=38.2
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
+||++.-.++.|-+ =...+.++|++ +|++|.++.++.....+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~-~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEE-LDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHH-TTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHH-CCCEEEEEEChhHHHHhhH
Confidence 48999999998855 57899999999 9999999999888877776
No 78
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=65.31 E-value=29 Score=31.38 Aligned_cols=33 Identities=9% Similarity=0.099 Sum_probs=23.6
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
.+|||+|+. --+....+.++|.+ .||+|..+.+
T Consensus 21 ~~mrIvf~G-----~~~fa~~~L~~L~~-~~~~i~~Vvt 53 (329)
T 2bw0_A 21 QSMKIAVIG-----QSLFGQEVYCHLRK-EGHEVVGVFT 53 (329)
T ss_dssp CCCEEEEEC-----CHHHHHHHHHHHHH-TTCEEEEEEE
T ss_pred CCCEEEEEc-----CcHHHHHHHHHHHH-CCCeEEEEEe
Confidence 358999993 22444457788999 8999987664
No 79
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=64.59 E-value=8.9 Score=33.39 Aligned_cols=39 Identities=8% Similarity=0.005 Sum_probs=35.7
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
.+.+|++.+.++..|-....-++..|.. +|++|.+++..
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~-~G~~Vi~LG~~ 160 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRA-NGYNVVDLGRD 160 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHH-TTCEEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCCC
Confidence 4679999999999999999999999999 99999998743
No 80
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=62.82 E-value=54 Score=29.31 Aligned_cols=35 Identities=14% Similarity=0.022 Sum_probs=25.4
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
+++|||+|+..+..+ ....++|.+ .||+|..+.+.
T Consensus 1 s~~mrIvf~Gt~~fa-----~~~L~~L~~-~~~~i~~Vvt~ 35 (314)
T 1fmt_A 1 SESLRIIFAGTPDFA-----ARHLDALLS-SGHNVVGVFTQ 35 (314)
T ss_dssp CCCCEEEEEECSHHH-----HHHHHHHHH-TTCEEEEEECC
T ss_pred CCCCEEEEEecCHHH-----HHHHHHHHH-CCCcEEEEEeC
Confidence 357899999876433 455577888 89999876653
No 81
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=62.34 E-value=10 Score=31.87 Aligned_cols=44 Identities=9% Similarity=0.117 Sum_probs=38.2
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
++||++...++.+-+. ...|.+.|++ +| +|.++.++.....+..
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~-~g-~V~vv~T~~A~~fv~~ 62 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTE-WA-EVRAVVTKSSLHFLDK 62 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHT-TS-EEEEEECTGGGGTCCG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhc-CC-CEEEEEcchHHHhcCH
Confidence 5789999999998777 8999999999 99 9999999887766655
No 82
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=60.30 E-value=13 Score=31.39 Aligned_cols=43 Identities=14% Similarity=0.028 Sum_probs=37.3
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchH
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQ 47 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~ 47 (427)
++.+|++.+.++-.|-....-++..|.. +|++|.+++...-.+
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~-~G~~Vi~LG~~vp~e 133 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGA-NGFQIVDLGVDVLNE 133 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHH-TSCEEEECCSSCCHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHH-CCCeEEEcCCCCCHH
Confidence 4579999999999999999999999999 999999998654333
No 83
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=60.30 E-value=13 Score=31.59 Aligned_cols=39 Identities=13% Similarity=0.093 Sum_probs=35.9
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
+++|++..-|+.|-..-++.+|.+|++ +|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~-~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLR-QGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHH-CCCCEEEEEeCC
Confidence 578999999999999999999999999 999999888765
No 84
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=58.68 E-value=4.3 Score=36.37 Aligned_cols=36 Identities=14% Similarity=0.206 Sum_probs=27.6
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcC-----C-CEEEEEeC
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRST-----G-FKITIANT 42 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~-----G-h~Vt~~~~ 42 (427)
|..++|+|.|+-.+..|. .+|..|++ . | |+|+++..
T Consensus 4 m~~~~m~I~iiG~G~mG~-----~~a~~L~~-~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGG-----YYGAMLAL-RAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHH-----HHHHHHHH-HHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHH-----HHHHHHHh-CccccCCCCCEEEEEc
Confidence 555668999998888874 56888888 8 9 99999876
No 85
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=58.61 E-value=9.4 Score=34.30 Aligned_cols=95 Identities=16% Similarity=0.004 Sum_probs=56.6
Q ss_pred CCeEEEEecCCcc---cCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccc--
Q 035495 278 PASVLHISFGSQN---TISSSQMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNW-- 352 (427)
Q Consensus 278 ~~~vV~vs~Gs~~---~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~-- 352 (427)
+++.|.+.-|+.. ..+.+.+.++++.+.+.+.++++..+... + ....+++...-+++.+.+-
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~------e-------~~~~~~i~~~~~~~~l~g~~s 243 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH------E-------EERAKRLAEGFAYVEVLPKMS 243 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH------H-------HHHHHHHHTTCTTEEECCCCC
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH------H-------HHHHHHHHhhCCcccccCCCC
Confidence 3567888777653 35677888888888776777766544321 1 0011111100123333332
Q ss_pred cc-hHhhhcccCcceeecc-CChhhHHHHHhcCCcEEec
Q 035495 353 AP-QLEILSHKSTGAFLSH-CGWNSVLESLSQGLPTIGW 389 (427)
Q Consensus 353 vp-q~~ll~~~~v~~~I~H-gG~~s~~eal~~GvP~v~~ 389 (427)
+. -.+++++++ ++|+. .|. ++=|.+.|+|+|++
T Consensus 244 l~el~ali~~a~--l~I~~DSG~--~HlAaa~g~P~v~l 278 (326)
T 2gt1_A 244 LEGVARVLAGAK--FVVSVDTGL--SHLTAALDRPNITV 278 (326)
T ss_dssp HHHHHHHHHTCS--EEEEESSHH--HHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhCC--EEEecCCcH--HHHHHHcCCCEEEE
Confidence 22 367899999 89998 554 33466699999998
No 86
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=57.46 E-value=8.3 Score=30.22 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=26.4
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
++.||+++-. |++- ..+++.|.+ +||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~-~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQ-RGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHH-TTCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHH-CCCCEEEEECC
Confidence 3568888854 5444 688999999 99999999874
No 87
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=57.32 E-value=44 Score=28.36 Aligned_cols=105 Identities=8% Similarity=0.028 Sum_probs=60.9
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcC--CCEEEEEeCC-cch---HHhhhhhcCCCCCCCCCCceeEEEcCCCCCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRST--GFKITIANTP-LNI---QYLQNTISSANPNSPEKFNINLVELPFCSSD 77 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~--Gh~Vt~~~~~-~~~---~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 77 (427)
+++||+|+..++.+ -+.++.++|.+ . +++|..+.+. ... ++.++ .++.+..++..
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~-~~~~~~I~~Vvt~~~~~~~~~~A~~------------~gIp~~~~~~~--- 81 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCRE-GRIPGRVAVVISDRADAYGLERARR------------AGVDALHMDPA--- 81 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHT-TSSSEEEEEEEESSTTCHHHHHHHH------------TTCEEEECCGG---
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHh-CCCCCeEEEEEcCCCchHHHHHHHH------------cCCCEEEECcc---
Confidence 46799999777643 35667777877 5 6888666543 222 33333 66777654411
Q ss_pred CCCCCCCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCC-cchHHHHHHHhCCceEEEecc
Q 035495 78 HGLPPNTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTF-FGWAVDVAKSAGSTNVTFATG 153 (427)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~-~~~~~~~A~~lgiP~v~~~~~ 153 (427)
.+. + . ..+ .+.+.+.+++.+ +|+||+=.+ ......+-..+...++.+.++
T Consensus 82 -~~~-------~-r----~~~-------~~~~~~~l~~~~------~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 82 -AYP-------S-R----TAF-------DAALAERLQAYG------VDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp -GSS-------S-H----HHH-------HHHHHHHHHHTT------CSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred -ccc-------c-h----hhc-------cHHHHHHHHhcC------CCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 110 0 0 011 123455666665 999998654 334555666677778888765
No 88
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=57.15 E-value=19 Score=33.24 Aligned_cols=40 Identities=15% Similarity=0.020 Sum_probs=33.4
Q ss_pred cEEEEeC-CCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchH
Q 035495 6 EHIGMLP-LMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQ 47 (427)
Q Consensus 6 ~~il~~~-~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~ 47 (427)
++|++++ -++.|-..-...||..|++ +|++|.++.. ....
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~-~g~~vllvd~-~~~~ 42 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLAS-QGKRVLLAGL-AEPV 42 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHH-TTCCEEEEEC-SCSH
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHH-CCCCeEEEeC-CCCC
Confidence 4777666 5688999999999999999 9999999998 5433
No 89
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=56.50 E-value=7.6 Score=32.18 Aligned_cols=45 Identities=4% Similarity=-0.132 Sum_probs=37.7
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
+.||++...++.|=+. ...+.+.|.+ +|++|.++.++.....+..
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~-~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKS-FFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTT-TSSEEEEEECHHHHHHSCH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHH-CCCEEEEEEchhHHHHHHH
Confidence 4689988888887775 7899999999 9999999999877766554
No 90
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=55.86 E-value=10 Score=31.03 Aligned_cols=44 Identities=5% Similarity=0.064 Sum_probs=36.5
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
.||++.-.++.+=+ =...+.++|++ +|++|.++.++.....+..
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~-~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQ-HFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTT-TSSCEEEEECGGGGGTSCG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHH-CCCEEEEEEchhHHHHHHH
Confidence 47888888887766 57899999999 9999999999887766655
No 91
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=55.68 E-value=43 Score=30.87 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=27.7
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
++++|+++..+.. .+.+++++++ .|++|.++..+.
T Consensus 6 ~~~~ilI~g~g~~-----~~~~~~a~~~-~G~~~v~v~~~~ 40 (403)
T 4dim_A 6 DNKRLLILGAGRG-----QLGLYKAAKE-LGIHTIAGTMPN 40 (403)
T ss_dssp CCCEEEEECCCGG-----GHHHHHHHHH-HTCEEEEEECSS
T ss_pred CCCEEEEECCcHh-----HHHHHHHHHH-CCCEEEEEcCCC
Confidence 4578999877754 3669999999 999999997643
No 92
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=55.51 E-value=64 Score=26.01 Aligned_cols=45 Identities=11% Similarity=0.011 Sum_probs=30.4
Q ss_pred EEeccccch-Hh-hhcccCcceeeccCChhhHHH---HHhcCCcEEeccCc
Q 035495 347 LLVRNWAPQ-LE-ILSHKSTGAFLSHCGWNSVLE---SLSQGLPTIGWPIA 392 (427)
Q Consensus 347 v~~~~~vpq-~~-ll~~~~v~~~I~HgG~~s~~e---al~~GvP~v~~P~~ 392 (427)
.++.+..++ .. +...++. .++--||.||+.| ++.+++|++++|.|
T Consensus 91 ~i~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EEECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred eEEcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 344466664 22 3344553 6777899998655 57799999999984
No 93
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=54.84 E-value=16 Score=30.75 Aligned_cols=109 Identities=6% Similarity=-0.003 Sum_probs=58.3
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHH-hcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCC
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIH-RSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLP 81 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~-~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 81 (427)
+.++||+++..+..+.+..++. ++. . .+++|..+.+.......+.... .|+.+..++.. ..
T Consensus 10 ~~~~ri~vl~SG~gsnl~all~---~~~~~-~~~eI~~Vis~~~a~~~~~A~~---------~gIp~~~~~~~----~~- 71 (215)
T 3da8_A 10 SAPARLVVLASGTGSLLRSLLD---AAVGD-YPARVVAVGVDRECRAAEIAAE---------ASVPVFTVRLA----DH- 71 (215)
T ss_dssp CSSEEEEEEESSCCHHHHHHHH---HSSTT-CSEEEEEEEESSCCHHHHHHHH---------TTCCEEECCGG----GS-
T ss_pred CCCcEEEEEEeCChHHHHHHHH---HHhcc-CCCeEEEEEeCCchHHHHHHHH---------cCCCEEEeCcc----cc-
Confidence 3568999998887665554443 332 3 3568877665443322222111 56776644310 00
Q ss_pred CCCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCC-cchHHHHHHHhCCceEEEecc
Q 035495 82 PNTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTF-FGWAVDVAKSAGSTNVTFATG 153 (427)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~-~~~~~~~A~~lgiP~v~~~~~ 153 (427)
.+ . ..+ .+.+.+.+++.. +|+||+=.+ ......+-+.+.-.++.++++
T Consensus 72 ------~~-r----~~~-------d~~~~~~l~~~~------~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 72 ------PS-R----DAW-------DVAITAATAAHE------PDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp ------SS-H----HHH-------HHHHHHHHHTTC------CSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred ------cc-h----hhh-------hHHHHHHHHhhC------CCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 00 0 011 233455666655 999997543 334455556666678887765
No 94
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=54.07 E-value=34 Score=28.74 Aligned_cols=103 Identities=12% Similarity=0.063 Sum_probs=57.1
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCC--EEEEEeCC-cch---HHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGF--KITIANTP-LNI---QYLQNTISSANPNSPEKFNINLVELPFCSSDHG 79 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh--~Vt~~~~~-~~~---~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 79 (427)
+||+|+..++.+ -+.++.++|.+ .+| +|..+.+. ... ++.++ .|+.+..+... .
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~-~~~~~~i~~Vvs~~~~~~~~~~A~~------------~gIp~~~~~~~----~ 61 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIES-GKVNASIELVISDNPKAYAIERCKK------------HNVECKVIQRK----E 61 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHT-TSSCEEEEEEEESCTTCHHHHHHHH------------HTCCEEECCGG----G
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHh-CCCCCeEEEEEeCCCChHHHHHHHH------------cCCCEEEeCcc----c
Confidence 689988766653 36667778888 788 77655433 222 23333 45666544310 1
Q ss_pred CCCCCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCC-cchHHHHHHHhCCceEEEecc
Q 035495 80 LPPNTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTF-FGWAVDVAKSAGSTNVTFATG 153 (427)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~-~~~~~~~A~~lgiP~v~~~~~ 153 (427)
+. + ...+ .+.+.+.+++.+ +|+||+=.+ ......+-+.....++.++++
T Consensus 62 ~~-------~-----r~~~-------~~~~~~~l~~~~------~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 62 FP-------S-----KKEF-------EERMALELKKKG------VELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp SS-------S-----HHHH-------HHHHHHHHHHTT------CCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred cc-------c-----hhhh-------hHHHHHHHHhcC------CCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 10 0 0011 123455666665 999997644 333445555566678887765
No 95
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=53.65 E-value=10 Score=28.74 Aligned_cols=35 Identities=23% Similarity=0.313 Sum_probs=24.6
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
++.++|+++-. |.+- ..+|+.|.+ +||+|+++...
T Consensus 2 ~~~m~i~IiG~---G~iG--~~~a~~L~~-~g~~v~~~d~~ 36 (140)
T 1lss_A 2 SHGMYIIIAGI---GRVG--YTLAKSLSE-KGHDIVLIDID 36 (140)
T ss_dssp ---CEEEEECC---SHHH--HHHHHHHHH-TTCEEEEEESC
T ss_pred CCCCEEEEECC---CHHH--HHHHHHHHh-CCCeEEEEECC
Confidence 34578988843 5543 367899999 99999998753
No 96
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=52.96 E-value=18 Score=28.30 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=26.0
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
.+++|+++-.+..| ..+|+.|.+ +|++|+++...
T Consensus 18 ~~~~v~IiG~G~iG-----~~la~~L~~-~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGCGRLG-----SLIANLASS-SGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEESC
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHh-CCCeEEEEECC
Confidence 45789988654444 567899999 99999998753
No 97
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=52.13 E-value=12 Score=33.08 Aligned_cols=32 Identities=16% Similarity=0.247 Sum_probs=23.3
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
|||+++- +.|.+- -.|+++|.+ +||+|+.++-
T Consensus 1 MkILVTG--atGfIG--~~L~~~L~~-~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGG--GTGFIG--TALTQLLNA-RGHEVTLVSR 32 (298)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEEC--CCCHHH--HHHHHHHHH-CCCEEEEEEC
Confidence 4777653 444443 468899999 9999999974
No 98
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=51.28 E-value=13 Score=33.68 Aligned_cols=41 Identities=22% Similarity=0.191 Sum_probs=31.4
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
++||+|+-.++.|- .+|..|++ .||+|+++......+.+.+
T Consensus 3 ~mkI~IiGaG~~G~-----~~a~~L~~-~g~~V~~~~r~~~~~~~~~ 43 (335)
T 3ghy_A 3 LTRICIVGAGAVGG-----YLGARLAL-AGEAINVLARGATLQALQT 43 (335)
T ss_dssp CCCEEEESCCHHHH-----HHHHHHHH-TTCCEEEECCHHHHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHH-CCCEEEEEEChHHHHHHHH
Confidence 57899998888774 57899999 9999999986433444444
No 99
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=51.26 E-value=25 Score=33.29 Aligned_cols=42 Identities=17% Similarity=0.065 Sum_probs=34.6
Q ss_pred EEEEeCCCCccCHHHHHHHHHHHHhcC-CCEEEEEeCCcchHHh
Q 035495 7 HIGMLPLMAHGHLIPFLALAKQIHRST-GFKITIANTPLNIQYL 49 (427)
Q Consensus 7 ~il~~~~p~~GH~~P~l~La~~L~~~~-Gh~Vt~~~~~~~~~~v 49 (427)
-+++...|+.|-..-.+.+|...+. . |..|.|++.+...+.+
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~-~~g~~vl~~slE~~~~~l 244 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAAL-KEGVGVGIYSLEMPAAQL 244 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHH-TTCCCEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHH-hCCCeEEEEECCCCHHHH
Confidence 4667778999999999999999886 5 8999999988765443
No 100
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=50.15 E-value=21 Score=27.55 Aligned_cols=43 Identities=9% Similarity=-0.075 Sum_probs=26.1
Q ss_pred CCCCCcEEEEe-CCCCccCH--HHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 1 MGSENEHIGML-PLMAHGHL--IPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 1 m~~~~~~il~~-~~p~~GH~--~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
|+.+|.+++|+ ..+-+|+. .-.+.+|.++.+ .||+|+++-...
T Consensus 1 ~~~~Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a-~~~~v~Vff~~D 46 (136)
T 2hy5_B 1 MSEVVKKFMYLNRKAPYGTIYAWEALEVVLIGAA-FDQDVCVLFLDD 46 (136)
T ss_dssp ----CCEEEEEECSCTTTSSHHHHHHHHHHHHGG-GCCEEEEEECGG
T ss_pred CccchhEEEEEEeCCCCCcHHHHHHHHHHHHHHh-CCCCEEEEEEhH
Confidence 55443345533 44455654 446788999998 999999987643
No 101
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=50.04 E-value=10 Score=34.88 Aligned_cols=37 Identities=27% Similarity=0.283 Sum_probs=29.7
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
|++.++||.|+-.+..|. .+|..|++ .||+|++....
T Consensus 25 m~~~~mkI~VIGaG~mG~-----alA~~La~-~G~~V~l~~r~ 61 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGT-----ALALVLAR-KGQKVRLWSYE 61 (356)
T ss_dssp --CCCSCEEEECCSHHHH-----HHHHHHHT-TTCCEEEECSC
T ss_pred ccccCCeEEEECccHHHH-----HHHHHHHH-CCCeEEEEeCC
Confidence 445568999999988874 68999999 99999998764
No 102
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=49.82 E-value=12 Score=32.06 Aligned_cols=36 Identities=14% Similarity=0.280 Sum_probs=30.0
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
|..++|+|.|+-.+..|- .||+.|++ +||+|+.+..
T Consensus 2 ~~~~~mkI~IIG~G~~G~-----sLA~~L~~-~G~~V~~~~~ 37 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTV-----NMAEKLDS-VGHYVTVLHA 37 (232)
T ss_dssp -CCCCCEEEEECCSCCCS-----CHHHHHHH-TTCEEEECSS
T ss_pred CCCCCcEEEEEeeCHHHH-----HHHHHHHH-CCCEEEEecC
Confidence 455678999999998884 68999999 9999998765
No 103
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=49.69 E-value=26 Score=31.22 Aligned_cols=39 Identities=13% Similarity=0.100 Sum_probs=31.1
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
+||+++-.++.|- .+|..|++ .||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~-~g~~V~~~~r~~-~~~i~~ 41 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQR-SGEDVHFLLRRD-YEAIAG 41 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHH-TSCCEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHH-CCCeEEEEEcCc-HHHHHh
Confidence 6899999999884 46889999 999999998765 455655
No 104
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=49.26 E-value=13 Score=33.04 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=29.0
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
|..++++|.|+-.+..|+ .||..|++ +||+|+++...
T Consensus 11 ~~~~~~~I~VIG~G~mG~-----~iA~~la~-~G~~V~~~d~~ 47 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGA-----GIAQVAAA-TGHTVVLVDQT 47 (302)
T ss_dssp -CCCCCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECSC
T ss_pred ccccCCEEEEECCCHHHH-----HHHHHHHh-CCCeEEEEECC
Confidence 444567899998888776 58899999 99999988653
No 105
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=49.05 E-value=24 Score=29.17 Aligned_cols=47 Identities=17% Similarity=0.204 Sum_probs=37.3
Q ss_pred CCcHHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEEecchHH
Q 035495 104 SPKTPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTFATGGAY 156 (427)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 156 (427)
...+.+++.++++++ .+.|+||.|. .+..+|+++|+|.+.+.+..-+
T Consensus 126 ~~~~e~~~~i~~l~~---~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 126 SSEDEITTLISKVKT---ENIKIVVSGK---TVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp CSGGGHHHHHHHHHH---TTCCEEEECH---HHHHHHHHTTCEEEECCCCHHH
T ss_pred CCHHHHHHHHHHHHH---CCCeEEECCH---HHHHHHHHcCCcEEEEecCHHH
Confidence 345677888888874 5599999985 4689999999999998875443
No 106
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=48.52 E-value=70 Score=26.65 Aligned_cols=104 Identities=9% Similarity=0.045 Sum_probs=0.0
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcC--CCEEEEEeCCc----chHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCC
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRST--GFKITIANTPL----NIQYLQNTISSANPNSPEKFNINLVELPFCSSDH 78 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~--Gh~Vt~~~~~~----~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 78 (427)
|+||+++..++.+ -+.++.++|.+ . +|+|..+.+.. ..++.++ .++.+..++
T Consensus 3 m~ki~vl~sG~g~---~~~~~l~~l~~-~~l~~~I~~Vit~~~~~~v~~~A~~------------~gIp~~~~~------ 60 (212)
T 3av3_A 3 MKRLAVFASGSGT---NFQAIVDAAKR-GDLPARVALLVCDRPGAKVIERAAR------------ENVPAFVFS------ 60 (212)
T ss_dssp CEEEEEECCSSCH---HHHHHHHHHHT-TCCCEEEEEEEESSTTCHHHHHHHH------------TTCCEEECC------
T ss_pred CcEEEEEEECCcH---HHHHHHHHHHh-CCCCCeEEEEEeCCCCcHHHHHHHH------------cCCCEEEeC------
Q ss_pred CCCCCCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCcc-hHHHHHHHhCCceEEEecc
Q 035495 79 GLPPNTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFFG-WAVDVAKSAGSTNVTFATG 153 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~-~~~~~A~~lgiP~v~~~~~ 153 (427)
..-+..-....+.+.+.+++.. +|+||+=.+.. ....+-..+...++.++++
T Consensus 61 -----------------~~~~~~~~~~~~~~~~~l~~~~------~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 61 -----------------PKDYPSKAAFESEILRELKGRQ------IDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp -----------------GGGSSSHHHHHHHHHHHHHHTT------CCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred -----------------cccccchhhhHHHHHHHHHhcC------CCEEEEchhhhhCCHHHHhhhcCCEEEEecC
No 107
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=48.50 E-value=16 Score=32.84 Aligned_cols=42 Identities=14% Similarity=0.311 Sum_probs=30.9
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
.++||+++-.++.| ..+|..|++ .||+|+++..+...+.+.+
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~-~G~~V~l~~~~~~~~~i~~ 59 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLAR-AGHEVILIARPQHVQAIEA 59 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHH-TTCEEEEECCHHHHHHHHH
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHH-CCCeEEEEEcHhHHHHHHh
Confidence 35789999888888 457899999 9999999944334455554
No 108
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=47.54 E-value=12 Score=28.68 Aligned_cols=34 Identities=9% Similarity=0.084 Sum_probs=25.3
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
++.||+++-. |.+ -..+|+.|.+ +||+|+++...
T Consensus 5 ~~~~v~I~G~---G~i--G~~la~~L~~-~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGS---EAA--GVGLVRELTA-AGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECC---SHH--HHHHHHHHHH-TTCCEEEEESC
T ss_pred CCCEEEEECC---CHH--HHHHHHHHHH-CCCeEEEEECC
Confidence 3568888865 432 3578999999 99999998753
No 109
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=47.52 E-value=38 Score=29.07 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=28.0
Q ss_pred CcEEEEeCCCCc----------c-CHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 5 NEHIGMLPLMAH----------G-HLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 5 ~~~il~~~~p~~----------G-H~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
|+||+++..... | ...=++.--..|++ .|++|++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~-aG~~V~~aSp 56 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTA-AGFEVDVASE 56 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHH-CCCEEEEEeC
Confidence 568998876632 2 24557777888999 9999999986
No 110
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=46.27 E-value=14 Score=35.70 Aligned_cols=36 Identities=14% Similarity=0.223 Sum_probs=29.7
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
++|+||+++-.+..| +.+|+.|.. .|++||++....
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~-~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDT-KKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCT-TTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhh-CCCcEEEECCCC
Confidence 457899999887666 578999999 999999998643
No 111
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=46.19 E-value=27 Score=31.27 Aligned_cols=39 Identities=13% Similarity=0.145 Sum_probs=31.6
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
+||+++-.++.|- .+|..|++ .||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~-~g~~V~~~~r~~-~~~i~~ 41 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAK-TGHCVSVVSRSD-YETVKA 41 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHH-TTCEEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHh-CCCeEEEEeCCh-HHHHHh
Confidence 6899998888884 57889999 999999998765 355655
No 112
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=45.09 E-value=10 Score=32.30 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=26.8
Q ss_pred CcEEEEeCCCC--------------ccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 5 NEHIGMLPLMA--------------HGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 5 ~~~il~~~~p~--------------~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
.++|++...|+ .|.+ -.++|+++++ +|++|++++.+.
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~m--G~aiA~~~~~-~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHL--GKIITETLLS-AGYEVCLITTKR 53 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHH--HHHHHHHHHH-TTCEEEEEECTT
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHH--HHHHHHHHHH-CCCEEEEEeCCc
Confidence 35666666653 4433 3578999999 999999998653
No 113
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=45.03 E-value=16 Score=33.63 Aligned_cols=30 Identities=30% Similarity=0.525 Sum_probs=25.8
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEE
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIA 40 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~ 40 (427)
+|||+|+-.+-.| +.+|..|++ +||+|+++
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~-~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRK-HGIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHh-CCCCEEEE
Confidence 3799999877666 889999999 99999997
No 114
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=44.86 E-value=1.3e+02 Score=27.17 Aligned_cols=46 Identities=22% Similarity=0.268 Sum_probs=32.5
Q ss_pred CcEEEEeCCCCcc--C--HHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 5 NEHIGMLPLMAHG--H--LIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 5 ~~~il~~~~p~~G--H--~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
+.-|+|.|..+.. . ..-+..+++.|.+ +|++|.+++.+..++..++
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~-~g~~vvl~g~~~e~~~~~~ 234 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGR-LGYKTVFFGGPMDLEMVQP 234 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHH-HTCEEEECCCTTTHHHHHH
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHh-CCCeEEEEeCcchHHHHHH
Confidence 3456666655432 1 3458899999999 8999999887776666555
No 115
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=44.36 E-value=21 Score=32.17 Aligned_cols=70 Identities=10% Similarity=0.023 Sum_probs=39.2
Q ss_pred cCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCc---ccCCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 035495 243 YIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQ---NTISSSQMMELDIGLEASAKSFLWVITPP 318 (427)
Q Consensus 243 ~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~---~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 318 (427)
..|.++..+|-+.+.. .....+++..+++..+-+++ -+|+. ..++.+.+..+.+.+++.+..+++..+..
T Consensus 106 ~~p~r~~~~~~l~~~~---~~~a~~el~~~~~~~g~~Gv---~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~~~ 178 (336)
T 2wm1_A 106 SYPRRFVGLGTLPMQA---PELAVKEMERCVKELGFPGV---QIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPWDM 178 (336)
T ss_dssp HSTTTEEEEECCCTTS---HHHHHHHHHHHHHTSCCSEE---EEESEETTEETTCGGGHHHHHHHHHHTCEEEEECCSC
T ss_pred hccCceeEEEeCCCcC---HHHHHHHHHHHHHccCCeEE---EECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCCCC
Confidence 3455666666554432 00112445555543222333 23332 23456678889999999999888876643
No 116
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=44.02 E-value=33 Score=32.81 Aligned_cols=100 Identities=10% Similarity=0.088 Sum_probs=53.6
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCCCCC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPPNTE 85 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 85 (427)
++-+|++. ++=.-++.+|+.|.+ .|.++. ++......++. .|+.+..+. ...++|+-..
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~-lGfeI~--ATgGTak~L~e------------~GI~v~~V~---~vTgfPEil~ 68 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSA-AGVEII--STGSTAKTIAD------------TGIPVTPVE---QLTGFPEVLD 68 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHH-TTCEEE--ECHHHHHHHHT------------TTCCCEEHH---HHHSCCCCTT
T ss_pred ccEEEEEE---eccccHHHHHHHHHH-CCCEEE--EcchHHHHHHH------------cCCceeecc---ccCCCchhhC
Confidence 44445544 344558899999999 998875 56566777777 555655443 1224444322
Q ss_pred C--CccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCC
Q 035495 86 N--TENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTF 132 (427)
Q Consensus 86 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~ 132 (427)
. .+-+|. +. -.-...+..+.-.+.+++.. =.+.|+||++..
T Consensus 69 GRVKTLHP~--ih-gGiLa~r~~~~h~~~l~~~~---i~~iDlVvvNLY 111 (523)
T 3zzm_A 69 GRVKTLHPR--VH-AGLLADLRKSEHAAALEQLG---IEAFELVVVNLY 111 (523)
T ss_dssp TTSSSCSHH--HH-HHHHCCTTSHHHHHHHHHHT---CCCCSEEEEECC
T ss_pred CccccCCch--hh-hhhccCCCCHHHHHHHHHCC---CCceeEEEEeCC
Confidence 1 111121 11 11112334444444455443 145899999853
No 117
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=43.21 E-value=21 Score=30.30 Aligned_cols=38 Identities=13% Similarity=-0.047 Sum_probs=33.6
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
|+|+|..-++.|=..-...||..|++ +|++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~-~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMAS-DYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTT-TCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 47889888899999999999999999 999999997544
No 118
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=42.87 E-value=29 Score=30.92 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=24.7
Q ss_pred hcccCcceeeccCChhhHHHHHhc----CCcEEeccC
Q 035495 359 LSHKSTGAFLSHCGWNSVLESLSQ----GLPTIGWPI 391 (427)
Q Consensus 359 l~~~~v~~~I~HgG~~s~~eal~~----GvP~v~~P~ 391 (427)
...++ ++|.-||-||+.+++.. ++|+++++.
T Consensus 73 ~~~~d--~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 73 ADGCE--LVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ---CC--CEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ccCCC--EEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 34456 89999999999999854 899999985
No 119
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=42.41 E-value=48 Score=27.79 Aligned_cols=108 Identities=15% Similarity=0.164 Sum_probs=59.9
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcC-CCEEEEEeCCc-c---hHHhhhhhcCCCCCCCCCCceeEEEcCCCC
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRST-GFKITIANTPL-N---IQYLQNTISSANPNSPEKFNINLVELPFCS 75 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~-Gh~Vt~~~~~~-~---~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~ 75 (427)
|+.+++||+++..+..+.+.-+ .++..+ . +++|..+.+.. . .++.++ .|+.+..++..
T Consensus 1 ~~~~~~riavl~SG~Gsnl~al---l~~~~~-~~~~eI~~Vis~~~~a~~~~~A~~------------~gIp~~~~~~~- 63 (215)
T 3tqr_A 1 MNREPLPIVVLISGNGTNLQAI---IGAIQK-GLAIEIRAVISNRADAYGLKRAQQ------------ADIPTHIIPHE- 63 (215)
T ss_dssp ---CCEEEEEEESSCCHHHHHH---HHHHHT-TCSEEEEEEEESCTTCHHHHHHHH------------TTCCEEECCGG-
T ss_pred CCCCCcEEEEEEeCCcHHHHHH---HHHHHc-CCCCEEEEEEeCCcchHHHHHHHH------------cCCCEEEeCcc-
Confidence 7778899999888776555444 444443 2 57888776532 2 223444 66777655411
Q ss_pred CCCCCCCCCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCC-cchHHHHHHHhCCceEEEecc
Q 035495 76 SDHGLPPNTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTF-FGWAVDVAKSAGSTNVTFATG 153 (427)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~-~~~~~~~A~~lgiP~v~~~~~ 153 (427)
.++ .. ..+ .+.+.+.+++.. +|+||+=.+ ......+-+.+...++.++++
T Consensus 64 ---~~~------~r------~~~-------d~~~~~~l~~~~------~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 64 ---EFP------SR------TDF-------ESTLQKTIDHYD------PKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp ---GSS------SH------HHH-------HHHHHHHHHTTC------CSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---ccC------ch------hHh-------HHHHHHHHHhcC------CCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 110 00 011 223455666665 999998654 334456666677778888765
No 120
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=42.33 E-value=1.8e+02 Score=25.67 Aligned_cols=34 Identities=15% Similarity=0.118 Sum_probs=20.6
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCC--CEEEEEe
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTG--FKITIAN 41 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~G--h~Vt~~~ 41 (427)
+++++|+++- +.|.+- ..|+++|.+ +| ++|+.+.
T Consensus 22 ~~~~~vlVtG--atG~iG--~~l~~~L~~-~g~~~~v~~~~ 57 (346)
T 4egb_A 22 SNAMNILVTG--GAGFIG--SNFVHYMLQ-SYETYKIINFD 57 (346)
T ss_dssp --CEEEEEET--TTSHHH--HHHHHHHHH-HCTTEEEEEEE
T ss_pred cCCCeEEEEC--CccHHH--HHHHHHHHh-hCCCcEEEEEe
Confidence 4556776654 334332 478899999 99 5555554
No 121
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=41.01 E-value=27 Score=29.12 Aligned_cols=48 Identities=10% Similarity=0.119 Sum_probs=36.4
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
.+++||++...++.+=+. ...|.++|++.+|++|.++.++.....+..
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~ 64 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYSP 64 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSCG
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhCH
Confidence 456789999888888555 589999997513999999999877766655
No 122
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=40.85 E-value=39 Score=28.71 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=30.6
Q ss_pred cHHHHHHHHhhhhhcCCCCcEEEecCCcc-------hHHHHHHHhCCceEEEe
Q 035495 106 KTPLYNLLMDIKEKAGKPPICIITDTFFG-------WAVDVAKSAGSTNVTFA 151 (427)
Q Consensus 106 ~~~~~~~l~~~~~~~~~~~D~vI~D~~~~-------~~~~~A~~lgiP~v~~~ 151 (427)
.+.+.+++++++ .+||+|++|-... .|..+.-.+|+|+|.+.
T Consensus 94 ~P~ll~al~~L~----~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 94 IPTVLAALDALP----CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHHHHHHHHTSS----SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHHHHhcC----CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 355566666665 4599999995433 26688888999999985
No 123
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=40.79 E-value=45 Score=25.42 Aligned_cols=31 Identities=13% Similarity=0.048 Sum_probs=23.0
Q ss_pred CCcEEEecCCcc--hHHHHHHHh-------CCceEEEecc
Q 035495 123 PPICIITDTFFG--WAVDVAKSA-------GSTNVTFATG 153 (427)
Q Consensus 123 ~~D~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 153 (427)
+||+||.|..++ .|..+++.+ ++|++.++..
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESS
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECC
Confidence 399999998877 467666654 4888877654
No 124
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=40.76 E-value=1.3e+02 Score=25.18 Aligned_cols=44 Identities=9% Similarity=-0.038 Sum_probs=30.4
Q ss_pred EEeccccch--HhhhcccCcceeeccCChhhHHHHH---------hcCCcEEeccC
Q 035495 347 LLVRNWAPQ--LEILSHKSTGAFLSHCGWNSVLESL---------SQGLPTIGWPI 391 (427)
Q Consensus 347 v~~~~~vpq--~~ll~~~~v~~~I~HgG~~s~~eal---------~~GvP~v~~P~ 391 (427)
+.+...++. ..+..+++. +++--||.||+-|.. .+++|++.+-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 444455553 234445554 788899999988776 57999999863
No 125
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=40.43 E-value=21 Score=31.57 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=26.0
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
++|+|+|+-.+..|. .+|..|++ +||+|+++..
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGS-----RLGIMLHQ-GGNDVTLIDQ 34 (316)
T ss_dssp --CEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CCCeEEEECcCHHHH-----HHHHHHHh-CCCcEEEEEC
Confidence 357999998777764 57899999 9999999865
No 126
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=40.14 E-value=41 Score=29.53 Aligned_cols=38 Identities=8% Similarity=0.183 Sum_probs=25.0
Q ss_pred CCCcEEEEe-CCCCccCHHHHH--HHHHHHHhcCCCEEEEEe
Q 035495 3 SENEHIGML-PLMAHGHLIPFL--ALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 3 ~~~~~il~~-~~p~~GH~~P~l--~La~~L~~~~Gh~Vt~~~ 41 (427)
+++||||++ ..|-..-++-.+ ...++|.+ .||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~-~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQ-AGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHH-TTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHH-CCCeEEEEE
Confidence 356788755 467555455433 56778888 999999974
No 127
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=39.62 E-value=55 Score=29.30 Aligned_cols=43 Identities=16% Similarity=0.221 Sum_probs=32.6
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc---chHHhhh
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL---NIQYLQN 51 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~---~~~~v~~ 51 (427)
.++||.|+-.+..| +-.+|+-|++ +||+|+..-... ..+.+++
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~-~G~~V~~~D~~~~~~~~~~L~~ 48 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKE-AGFEVSGCDAKMYPPMSTQLEA 48 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHH-TTCEEEEEESSCCTTHHHHHHH
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHh-CCCEEEEEcCCCCcHHHHHHHh
Confidence 35689999999888 5579999999 999999986432 2344555
No 128
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=39.46 E-value=26 Score=32.36 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=28.5
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
|++++.+|+++-.+-.| +.+|..|++ +|++|+++=
T Consensus 1 M~~~~~~V~IVGaG~aG-----l~~A~~L~~-~G~~v~v~E 35 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISG-----LTAALMLRD-AGVDVDVYE 35 (397)
T ss_dssp -CCCCSEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEC
T ss_pred CCCCCCcEEEECCCHHH-----HHHHHHHHh-CCCCEEEEe
Confidence 66667899999877555 788999999 999999984
No 129
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=39.45 E-value=90 Score=25.50 Aligned_cols=42 Identities=10% Similarity=-0.078 Sum_probs=28.7
Q ss_pred eccccch--HhhhcccCcceeeccCChhhHHHHH---------hcCCcEEeccC
Q 035495 349 VRNWAPQ--LEILSHKSTGAFLSHCGWNSVLESL---------SQGLPTIGWPI 391 (427)
Q Consensus 349 ~~~~vpq--~~ll~~~~v~~~I~HgG~~s~~eal---------~~GvP~v~~P~ 391 (427)
+.++... ..+..+++. .++--||.||+-|.. .+++|++.+=.
T Consensus 94 ~~~~~~~Rk~~m~~~sda-~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 94 VTETMWERKQVMEDRANA-FITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp EESSHHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred EcCCHHHHHHHHHHHCCE-EEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 3355553 334556663 778889999998875 36999998853
No 130
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=39.30 E-value=34 Score=29.65 Aligned_cols=46 Identities=11% Similarity=-0.079 Sum_probs=32.3
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
+++||||+.-=-+. |---+..|+++|.+ +|+|+++.+...+.-...
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~--~~~V~VVAP~~~~Sg~g~ 54 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD--LGEVDVVAPDRNRSGASN 54 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT--TSEEEEEEESSCCTTCTT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh--cCCEEEEecCCCCcCccc
Confidence 56799998874444 33447788888876 799999998877765444
No 131
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=39.13 E-value=1e+02 Score=25.42 Aligned_cols=46 Identities=13% Similarity=-0.066 Sum_probs=30.9
Q ss_pred hhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEE
Q 035495 269 IIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEASAKSFLWV 314 (427)
Q Consensus 269 l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 314 (427)
+.+|+.....+.++||..+|......+.++.+.++|++++..+.+.
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 4445533334678899877654444566778889999988876554
No 132
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=39.10 E-value=42 Score=30.60 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=23.9
Q ss_pred CeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 035495 279 ASVLHISFGSQNTISSSQMMELDIGLEASAKSFLWVITP 317 (427)
Q Consensus 279 ~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 317 (427)
+.+++.+.||.+...+ ..+++++|.+.+.++.|....
T Consensus 3 ~~i~i~~GGTgGHi~p--alala~~L~~~g~~V~~vg~~ 39 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFP--ALACAREFQARGYAVHWLGTP 39 (365)
T ss_dssp CEEEEECCSSHHHHHH--HHHHHHHHHHTTCEEEEEECS
T ss_pred CcEEEEcCCCHHHHHH--HHHHHHHHHhCCCEEEEEECC
Confidence 3456665666543211 245788888899999998754
No 133
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=39.04 E-value=64 Score=24.50 Aligned_cols=39 Identities=8% Similarity=-0.066 Sum_probs=28.2
Q ss_pred cEEEEeC-CC--CccCHHHHHHHHHHHHhcCCCEEEEEeCCcc
Q 035495 6 EHIGMLP-LM--AHGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (427)
Q Consensus 6 ~~il~~~-~p--~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~ 45 (427)
.+++|+. .+ ........+.+|...++ .||+|+++-+..-
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a-~g~eV~vFf~~dG 57 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISAS-MEYETSVFFMIXG 57 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHH-TTCEEEEEECTTG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEEeCc
Confidence 4555443 33 45677888999999998 9999998876443
No 134
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=38.67 E-value=1.2e+02 Score=22.50 Aligned_cols=102 Identities=11% Similarity=0.011 Sum_probs=53.5
Q ss_pred CeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccC-CchhHHHHhccCCCcEEeccccchHh
Q 035495 279 ASVLHISFGSQNTISSSQMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEW-LPEGFEERIKEIKQGLLVRNWAPQLE 357 (427)
Q Consensus 279 ~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~v~~~~~vpq~~ 357 (427)
..+|+++.||-.....+.+..+.+.+++....+.+.+-.- ..+ +.+.+..-...+.+.+++..+
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~le~----------~~P~l~~~l~~l~~~G~~~vvvvPl----- 70 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAYMEL----------AEPSLDTIVNRAKGQGVEQFTVVPL----- 70 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEESSS----------SSSBHHHHHHHHHHTTCCEEEEEEC-----
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEEEeC----------CCCCHHHHHHHHHHcCCCEEEEEec-----
Confidence 5699999999743334567777777776434554443321 011 222222211122445555333
Q ss_pred hhcccCcceeeccCCh--hhHHHHHh-----cCCcEEeccCcccchhhHHHHHh
Q 035495 358 ILSHKSTGAFLSHCGW--NSVLESLS-----QGLPTIGWPIAAEQTYNSKMLVE 404 (427)
Q Consensus 358 ll~~~~v~~~I~HgG~--~s~~eal~-----~GvP~v~~P~~~DQ~~na~~v~~ 404 (427)
|+..|.+ +-+-+.+. +|+.+.+.+-.++.+..+..+.+
T Consensus 71 ---------fl~~G~H~~~Dip~~~~~~~~~~~~~i~~~~~LG~~p~l~~~l~~ 115 (126)
T 3lyh_A 71 ---------FLAAGRHLRKDVPAMIERLEAEHGVTIRLAEPIGKNPRLGLAIRD 115 (126)
T ss_dssp ---------CSCCCHHHHHHHHHHHHHHHHHHTCEEEECCCGGGSHHHHHHHHH
T ss_pred ---------ccCCCchhhhHHHHHHHHHHHHhCceEEEcCCCCCChHHHHHHHH
Confidence 5555554 22222211 28887777777776666665554
No 135
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=38.57 E-value=23 Score=31.78 Aligned_cols=36 Identities=8% Similarity=-0.071 Sum_probs=27.1
Q ss_pred EEEeCCCCccCHH--------------HHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 8 IGMLPLMAHGHLI--------------PFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 8 il~~~~p~~GH~~--------------P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
|++.+.|+.=.+- --.++|+++.+ +|++|+|++.+.
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~-~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLA-AGYGVLFLYRAR 89 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHH-TTCEEEEEEETT
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHH-CCCEEEEEecCC
Confidence 6677777755551 34578999999 999999998653
No 136
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=38.56 E-value=32 Score=29.87 Aligned_cols=32 Identities=25% Similarity=0.289 Sum_probs=24.4
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
+++|+++- + |.+ -..|+++|.+ +||+|+.++-
T Consensus 3 ~~~ilVtG--a-G~i--G~~l~~~L~~-~g~~V~~~~r 34 (286)
T 3gpi_A 3 LSKILIAG--C-GDL--GLELARRLTA-QGHEVTGLRR 34 (286)
T ss_dssp CCCEEEEC--C-SHH--HHHHHHHHHH-TTCCEEEEEC
T ss_pred CCcEEEEC--C-CHH--HHHHHHHHHH-CCCEEEEEeC
Confidence 45787773 4 633 4578999999 9999999975
No 137
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=38.13 E-value=25 Score=29.79 Aligned_cols=43 Identities=14% Similarity=0.197 Sum_probs=35.2
Q ss_pred CCcHHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEEec
Q 035495 104 SPKTPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTFAT 152 (427)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~~~ 152 (427)
...+.++..++++++ .+.|+||.|. .+..+|+++|+|.+.+.+
T Consensus 138 ~~~ee~~~~i~~l~~---~G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 138 ITEEDARGQINELKA---NGTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp SSHHHHHHHHHHHHH---TTCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred CCHHHHHHHHHHHHH---CCCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 446678888888874 5599999985 468999999999999874
No 138
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=37.97 E-value=41 Score=27.71 Aligned_cols=39 Identities=8% Similarity=0.118 Sum_probs=27.2
Q ss_pred CCCcEEEEeCCCCccCHHHHH-HHHHHHHhcCCCEEEEEeC
Q 035495 3 SENEHIGMLPLMAHGHLIPFL-ALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l-~La~~L~~~~Gh~Vt~~~~ 42 (427)
+++++|+++-....|+..-+. .+++.|.+ .|++|.++.-
T Consensus 4 ~~mmkilii~~S~~g~T~~la~~i~~~l~~-~g~~v~~~~l 43 (211)
T 1ydg_A 4 TAPVKLAIVFYSSTGTGYAMAQEAAEAGRA-AGAEVRLLKV 43 (211)
T ss_dssp -CCCEEEEEECCSSSHHHHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCCCeEEEEEECCCChHHHHHHHHHHHHhc-CCCEEEEEec
Confidence 456788877755588876654 45677777 8999888753
No 139
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=37.91 E-value=28 Score=29.82 Aligned_cols=45 Identities=16% Similarity=0.068 Sum_probs=32.9
Q ss_pred CCCCCcEEEEeC--CCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcch
Q 035495 1 MGSENEHIGMLP--LMAHGHLIPFLALAKQIHRSTGFKITIANTPLNI 46 (427)
Q Consensus 1 m~~~~~~il~~~--~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~ 46 (427)
|..++++++.+. -++.|-..-...||..|++ +|++|.++-.....
T Consensus 1 m~~~~~~vI~v~s~kGGvGKTt~a~~LA~~la~-~g~~VlliD~D~~~ 47 (257)
T 1wcv_1 1 MLRAKVRRIALANQKGGVGKTTTAINLAAYLAR-LGKRVLLVDLDPQG 47 (257)
T ss_dssp ----CCCEEEECCSSCCHHHHHHHHHHHHHHHH-TTCCEEEEECCTTC
T ss_pred CCCCCCEEEEEEeCCCCchHHHHHHHHHHHHHH-CCCCEEEEECCCCc
Confidence 554455555443 6688999999999999999 99999999766543
No 140
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=37.66 E-value=22 Score=31.55 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=26.8
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
.++++|.|+-.+..|. .+|+.|++ .||+|++...
T Consensus 5 ~~~~~I~iIG~G~mG~-----~~a~~l~~-~G~~V~~~dr 38 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMGM-----GAARSCLR-AGLSTWGADL 38 (303)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CCCCeEEEECCCHHHH-----HHHHHHHH-CCCeEEEEEC
Confidence 3467899998777774 68999999 9999998854
No 141
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=37.54 E-value=2.2e+02 Score=25.18 Aligned_cols=46 Identities=20% Similarity=0.328 Sum_probs=30.4
Q ss_pred CcEEEEeCCCCcc---C--HHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 5 NEHIGMLPLMAHG---H--LIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 5 ~~~il~~~~p~~G---H--~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
+.-|++.|....+ . ..-+..+++.|.+ +|++|.++..+...+..+.
T Consensus 180 ~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~-~~~~vvl~g~~~e~~~~~~ 230 (348)
T 1psw_A 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLID-EGYQVVLFGSAKDHEAGNE 230 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH-TTCEEEECCCGGGHHHHHH
T ss_pred CcEEEEECCCCccccCCCCHHHHHHHHHHHHH-CCCeEEEEeChhhHHHHHH
Confidence 3456666644221 2 2368899999999 8999998877665554444
No 142
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=37.13 E-value=23 Score=31.76 Aligned_cols=37 Identities=22% Similarity=0.339 Sum_probs=21.7
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
|+.++++|+++- +.|-+- ..|+++|.+ +||+|+.+.-
T Consensus 1 ~~~~~~~vlVTG--atGfIG--~~l~~~L~~-~G~~V~~~~r 37 (337)
T 2c29_D 1 MGSQSETVCVTG--ASGFIG--SWLVMRLLE-RGYTVRATVR 37 (337)
T ss_dssp -----CEEEETT--TTSHHH--HHHHHHHHH-TTCEEEEEES
T ss_pred CCCCCCEEEEEC--CchHHH--HHHHHHHHH-CCCEEEEEEC
Confidence 665556665543 334332 568899999 9999987653
No 143
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=37.10 E-value=40 Score=28.48 Aligned_cols=37 Identities=8% Similarity=-0.105 Sum_probs=29.6
Q ss_pred CCcEEEEeC--CCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 035495 4 ENEHIGMLP--LMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 4 ~~~~il~~~--~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
++|+.+|++ ....|-..-...|++.|++ +|++|.++=
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~-~G~~V~~~K 40 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEH-QNIKSLCLK 40 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHH-TTCCEEEEC
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHH-CCCeeEEec
Confidence 345555544 3577999999999999999 999999974
No 144
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=36.95 E-value=22 Score=26.79 Aligned_cols=42 Identities=12% Similarity=-0.062 Sum_probs=26.4
Q ss_pred cHHHHHHHHhhhhhcCCCCcEEEecCCcch--HHHHHHH---hCCceEEE
Q 035495 106 KTPLYNLLMDIKEKAGKPPICIITDTFFGW--AVDVAKS---AGSTNVTF 150 (427)
Q Consensus 106 ~~~~~~~l~~~~~~~~~~~D~vI~D~~~~~--~~~~A~~---lgiP~v~~ 150 (427)
..+..+.++.+.. .+||+||.|..++. |..+++. .++|++.+
T Consensus 39 a~~g~eAl~~~~~---~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 39 ASRMQEALDIARK---GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp SCCHHHHHHHHHH---CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred ECCHHHHHHHHHh---CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 3444555555443 34999999987773 5555554 47886654
No 145
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=36.93 E-value=66 Score=24.83 Aligned_cols=97 Identities=18% Similarity=0.180 Sum_probs=56.6
Q ss_pred EEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCCCCCCCCCCc
Q 035495 9 GMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHGLPPNTENTE 88 (427)
Q Consensus 9 l~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 88 (427)
+|++.. ..+=.-++.+|+.|.+ .|+++ +++......+++ .|+....+.- .+++. .
T Consensus 27 vliSv~-d~dK~~l~~~a~~l~~-lGf~i--~AT~GTa~~L~~------------~Gi~v~~v~k------~~egg---~ 81 (143)
T 2yvq_A 27 ILIGIQ-QSFRPRFLGVAEQLHN-EGFKL--FATEATSDWLNA------------NNVPATPVAW------PSQEG---Q 81 (143)
T ss_dssp EEEECC-GGGHHHHHHHHHHHHT-TTCEE--EEEHHHHHHHHH------------TTCCCEEECC------GGGC-----
T ss_pred EEEEec-ccchHHHHHHHHHHHH-CCCEE--EECchHHHHHHH------------cCCeEEEEEe------ccCCC---c
Confidence 444432 2456668899999999 99974 334444667776 4455554431 11110 0
Q ss_pred cchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCCc--------chHHHHHHHhCCceEEE
Q 035495 89 NLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTFF--------GWAVDVAKSAGSTNVTF 150 (427)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~~--------~~~~~~A~~lgiP~v~~ 150 (427)
....+++.+++++-+ .|+||.-.-- +.....|-.+|||++.-
T Consensus 82 --------------~~~~~~i~d~i~~g~------i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 82 --------------NPSLSSIRKLIRDGS------IDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp -----------------CBCHHHHHHTTS------CCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred --------------ccccccHHHHHHCCC------ceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 000134566666644 9999975432 13457788899999873
No 146
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=36.34 E-value=45 Score=32.72 Aligned_cols=42 Identities=10% Similarity=0.039 Sum_probs=37.4
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcch
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNI 46 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~ 46 (427)
.+.+|++.+.++-.|-....-++..|.. +|++|..++...-.
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~-~G~eVi~LG~~vP~ 138 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQC-NNYEIVDLGVMVPA 138 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHT-TTCEEEECCSSBCH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHH-CCCEEEECCCCCCH
Confidence 3679999999999999999999999999 99999999865443
No 147
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=36.26 E-value=54 Score=29.57 Aligned_cols=72 Identities=13% Similarity=0.046 Sum_probs=48.9
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCC
Q 035495 293 SSSQMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCG 372 (427)
Q Consensus 293 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG 372 (427)
+.+..+.+.+++.....+.||.+..+.+ -.++.++++...+-+++. .||-+.-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-------------------------~~rlL~~lD~~~i~~~PK--~~~GySD 115 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYN-------------------------SNGLLKYLDYDLIRENPK--FFCGYSD 115 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-------------------------GGGGGGGCCHHHHHTSCC--EEEECGG
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccccc-------------------------HHHHHhhcChhHHHhCCe--EEEEecc
Confidence 4566778999999999999999887620 011335555555555666 6777777
Q ss_pred hhhHHHHHh--cCCcEEeccC
Q 035495 373 WNSVLESLS--QGLPTIGWPI 391 (427)
Q Consensus 373 ~~s~~eal~--~GvP~v~~P~ 391 (427)
.-.++-|++ .|+..+-=|+
T Consensus 116 iTaL~~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 116 ITALNNAIYTKTGLVTYSGPH 136 (331)
T ss_dssp GHHHHHHHHHHHCBCEEECCC
T ss_pred hHHHHHHHHHhhCCcEEEccc
Confidence 777777776 4777766665
No 148
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=35.84 E-value=54 Score=28.30 Aligned_cols=34 Identities=12% Similarity=0.147 Sum_probs=25.4
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
+++|+++- + |.+- ..|+++|.+ +||+|+.++-..
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~-~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAP-QGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGG-GTCEEEEEESCG
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHH-CCCEEEEEEcCh
Confidence 36777774 5 6554 467899999 999999998543
No 149
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=35.42 E-value=3.1e+02 Score=26.42 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=27.3
Q ss_pred HHHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEE
Q 035495 107 TPLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTF 150 (427)
Q Consensus 107 ~~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 150 (427)
..+++++++.+ ||++|... ....+|+++|||++.+
T Consensus 446 ~el~~~i~~~~------pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 446 HDMEVVLEKLK------PDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHHHC------CSEEEECH---HHHHHHHHTTCEEEET
T ss_pred HHHHHHHHhcC------CCEEEccc---chhHHHHhcCCCEEEe
Confidence 34567777766 99999874 4678899999999864
No 150
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=35.34 E-value=43 Score=26.64 Aligned_cols=39 Identities=13% Similarity=0.259 Sum_probs=29.2
Q ss_pred CcEEEEeCCCC--c-cCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 5 NEHIGMLPLMA--H-GHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 5 ~~~il~~~~p~--~-GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
..+|+++|.=+ . --.++...|++.|.+ +|.+|.|+.+|.
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~-~G~~V~faIHPV 64 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKK-EGVEVSYAIHPV 64 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 35777777321 1 235688999999999 999999998864
No 151
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=35.26 E-value=47 Score=28.04 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=29.4
Q ss_pred HHHHHHHHhhhhhcCCCCcEEEecCCcch-------HHHHHHHhCCceEEEec
Q 035495 107 TPLYNLLMDIKEKAGKPPICIITDTFFGW-------AVDVAKSAGSTNVTFAT 152 (427)
Q Consensus 107 ~~~~~~l~~~~~~~~~~~D~vI~D~~~~~-------~~~~A~~lgiP~v~~~~ 152 (427)
+.+.++++.++ ..||+|++|-.... |..+.-.+|+|+|.+.=
T Consensus 91 P~~l~al~~L~----~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK 139 (225)
T 2w36_A 91 PLFLKAWEKLR----TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAK 139 (225)
T ss_dssp HHHHHHHTTCC----SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred HHHHHHHHhcC----CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEe
Confidence 44555566655 35999999954333 55777788999999853
No 152
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=35.24 E-value=2.3e+02 Score=24.80 Aligned_cols=35 Identities=11% Similarity=0.086 Sum_probs=19.6
Q ss_pred HHhcCCcEEeccCccc------------c----hhhHHHHHhhhce-eEEEec
Q 035495 379 SLSQGLPTIGWPIAAE------------Q----TYNSKMLVEEMGV-AVEMTR 414 (427)
Q Consensus 379 al~~GvP~v~~P~~~D------------Q----~~na~~v~~~lG~-G~~l~~ 414 (427)
.+++|+|+++-|-+.= | ...|..... +|+ |+.+.+
T Consensus 191 ~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA-~GA~gl~IE~ 242 (285)
T 3sz8_A 191 ETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIA-VGIAGLFLEA 242 (285)
T ss_dssp HHTTSCCEEEETTTTCC---------------HHHHHHHHHH-HCCSEEEEEE
T ss_pred HhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHH-hCCCEEEEEe
Confidence 3444778777565431 1 344555665 688 566644
No 153
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=35.13 E-value=32 Score=24.83 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=24.7
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCC-CEEEEEeCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTG-FKITIANTP 43 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~G-h~Vt~~~~~ 43 (427)
.+++|+++-.+..| ..+++.|.+ +| |+|+++...
T Consensus 4 ~~~~v~I~G~G~iG-----~~~~~~l~~-~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGKIG-----QMIAALLKT-SSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECCSHHH-----HHHHHHHHH-CSSEEEEEEESC
T ss_pred CcCeEEEECCCHHH-----HHHHHHHHh-CCCceEEEEeCC
Confidence 45688888554334 468899999 99 999888753
No 154
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=35.10 E-value=41 Score=31.99 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=26.0
Q ss_pred HHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEE
Q 035495 109 LYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTF 150 (427)
Q Consensus 109 ~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 150 (427)
+++++++.+ ||++|.... ...+|+++|||++.+
T Consensus 367 le~~i~~~~------pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 367 LEHAARAGQ------AQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHT------CSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHhcC------CCEEEEChh---HHHHHHHcCCCEEEe
Confidence 445555555 999999864 678999999999986
No 155
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=35.05 E-value=40 Score=27.89 Aligned_cols=37 Identities=24% Similarity=0.293 Sum_probs=24.7
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
|+ ++++|+++ ++.|.+- ..|+++|.+ +||+|+.++-.
T Consensus 1 M~-~m~~ilIt--GatG~iG--~~l~~~L~~-~g~~V~~~~r~ 37 (227)
T 3dhn_A 1 ME-KVKKIVLI--GASGFVG--SALLNEALN-RGFEVTAVVRH 37 (227)
T ss_dssp ---CCCEEEEE--TCCHHHH--HHHHHHHHT-TTCEEEEECSC
T ss_pred CC-CCCEEEEE--cCCchHH--HHHHHHHHH-CCCEEEEEEcC
Confidence 54 24677766 3444333 578999999 99999998753
No 156
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=35.04 E-value=59 Score=25.79 Aligned_cols=49 Identities=14% Similarity=0.165 Sum_probs=35.0
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
|+++++-| ++..+..--+.+.+-||..-++ .|++|+++-+-.-...+.+
T Consensus 2 m~~~kl~I-I~~sG~~dka~~a~ilA~~AaA-~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 2 MENKKMNL-LLFSGDYDKALASLIIANAARE-MEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp CTTCEEEE-EECCCCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGGGGGBC
T ss_pred CCCCcEEE-EEecCCHHHHHHHHHHHHHHHH-cCCCEEEEEeehhHHHhcc
Confidence 45444433 4445567788999999999999 9999999987555554444
No 157
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=34.78 E-value=41 Score=25.06 Aligned_cols=43 Identities=14% Similarity=0.094 Sum_probs=27.3
Q ss_pred CCCCCcEEEEeCCCCc-cCH-HHHHHHHHHHHhcCC--CEEEEEeCCcc
Q 035495 1 MGSENEHIGMLPLMAH-GHL-IPFLALAKQIHRSTG--FKITIANTPLN 45 (427)
Q Consensus 1 m~~~~~~il~~~~p~~-GH~-~P~l~La~~L~~~~G--h~Vt~~~~~~~ 45 (427)
|+.+ ++++|+-+-.. -.. +-.+.+|...++ +| |+|.++-...-
T Consensus 4 ~~~~-~K~~ivi~s~d~~~~~~~al~~A~~a~~-~G~~~eV~i~~~G~~ 50 (117)
T 2fb6_A 4 MSAN-DKLTILWTTDNKDTVFNMLAMYALNSKN-RGWWKHINIILWGAS 50 (117)
T ss_dssp SSTT-SEEEEEECCCCHHHHHHTHHHHHHHHHH-HTSCSEEEEEECSHH
T ss_pred cccC-CeEEEEEEcCChHHHHHHHHHHHHHHHH-cCCCCcEEEEEECCe
Confidence 4433 56665554432 222 347788988888 89 89999975433
No 158
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=34.75 E-value=31 Score=27.21 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=28.7
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
.+++++..+.- +-|++.+++.|.+ +|.+|+++ ...
T Consensus 24 ~~~llIaGG~G--ItPl~sm~~~l~~-~~~~v~l~-g~r 58 (158)
T 3lrx_A 24 GKILAIGAYTG--IVEVYPIAKAWQE-IGNDVTTL-HVT 58 (158)
T ss_dssp SEEEEEEETTH--HHHHHHHHHHHHH-HTCEEEEE-EEC
T ss_pred CeEEEEEccCc--HHHHHHHHHHHHh-cCCcEEEE-EeC
Confidence 46777776653 8999999999999 89999998 543
No 159
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=34.65 E-value=45 Score=26.66 Aligned_cols=38 Identities=21% Similarity=0.295 Sum_probs=28.6
Q ss_pred cEEEEeCCC--Cc-cCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 6 EHIGMLPLM--AH-GHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 6 ~~il~~~~p--~~-GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
.+|+++|.= +. --.++...|++.|.+ +|.+|.|+.+|.
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~-~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSE-QGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 467777732 11 235688999999999 999999998753
No 160
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=34.25 E-value=42 Score=30.78 Aligned_cols=38 Identities=11% Similarity=0.037 Sum_probs=28.5
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
|++++++|+++..+ .....+++++++ .||+|..+....
T Consensus 7 m~~~~~~ili~g~g-----~~~~~~~~a~~~-~G~~v~~~~~~~ 44 (391)
T 1kjq_A 7 LRPAATRVMLLGSG-----ELGKEVAIECQR-LGVEVIAVDRYA 44 (391)
T ss_dssp TSTTCCEEEEESCS-----HHHHHHHHHHHT-TTCEEEEEESST
T ss_pred CCCCCCEEEEECCC-----HHHHHHHHHHHH-cCCEEEEEECCC
Confidence 44566899999553 235778999999 999998887643
No 161
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=34.07 E-value=31 Score=31.19 Aligned_cols=33 Identities=24% Similarity=0.287 Sum_probs=26.1
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
++++|+|+-.+..|. .+|..|++ .||+|+++..
T Consensus 3 ~~mki~iiG~G~~G~-----~~a~~L~~-~g~~V~~~~r 35 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGH-----AFAAYLAL-KGQSVLAWDI 35 (359)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CcCeEEEECCCHHHH-----HHHHHHHh-CCCEEEEEeC
Confidence 357999998777664 47888999 9999998864
No 162
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=34.04 E-value=1.7e+02 Score=24.24 Aligned_cols=103 Identities=10% Similarity=0.011 Sum_probs=0.0
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcC--CCEEEEEeCCc----chHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRST--GFKITIANTPL----NIQYLQNTISSANPNSPEKFNINLVELPFCSSDHG 79 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~--Gh~Vt~~~~~~----~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 79 (427)
+||+++..+..+ -+.+|.+++.+ . +|+|..+.+.. ..++.++ .++.+..++
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~-~~~~~~i~~Vis~~~~~~~~~~A~~------------~gIp~~~~~------- 57 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKT-NKIKGTVRAVFSNKADAFGLERARQ------------AGIATHTLI------- 57 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHT-TSSSSEEEEEEESCTTCHHHHHHHH------------TTCEEEECC-------
T ss_pred CEEEEEEECCcH---HHHHHHHHHHc-CCCCceEEEEEeCCCchHHHHHHHH------------cCCcEEEeC-------
Q ss_pred CCCCCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCC-cchHHHHHHHhCCceEEEecc
Q 035495 80 LPPNTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTF-FGWAVDVAKSAGSTNVTFATG 153 (427)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~-~~~~~~~A~~lgiP~v~~~~~ 153 (427)
..-+..-....+.+.+.+++.. +|+||+=.+ ......+-..+...++.++++
T Consensus 58 ----------------~~~~~~r~~~~~~~~~~l~~~~------~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 58 ----------------ASAFDSREAYDRELIHEIDMYA------PDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ----------------GGGCSSHHHHHHHHHHHHGGGC------CSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----------------cccccchhhccHHHHHHHHhcC------CCEEEEeChhhhCCHHHHhhccCCEEEEccC
No 163
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=33.91 E-value=38 Score=30.19 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=27.9
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcc
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~ 45 (427)
+|+|+++..+ ....+++++.+ +||+|.++.....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~-~G~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKD-EGFETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHH-TTCCEEEESCGGG
T ss_pred ceEEEEECCh------hHHHHHHHHHh-CCCEEEEEECCCC
Confidence 4789998876 56789999999 9999999876543
No 164
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=33.75 E-value=48 Score=29.65 Aligned_cols=73 Identities=3% Similarity=-0.153 Sum_probs=38.8
Q ss_pred hcCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 035495 242 NYIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEASAKSFLWVITPP 318 (427)
Q Consensus 242 ~~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 318 (427)
...|.++..++.+.+.. .....+++..+++ .+-+++-+-..+.-..++.+.+..+.+.+++.+..+++..+..
T Consensus 109 ~~~p~r~~~~~~l~~~~---~~~a~~el~~~~~-~g~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~~~ 181 (334)
T 2hbv_A 109 AHNPQRIKVLAQVPLQD---LDLACKEASRAVA-AGHLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPWDM 181 (334)
T ss_dssp TTCTTTEEECBCCCTTS---HHHHHHHHHHHHH-HTCCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECCSC
T ss_pred hhCCCeEEEEEecCccC---HHHHHHHHHHHHH-cCCeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCCCC
Confidence 33445566555554432 0011244555552 2223332222111123556778899999999999988877653
No 165
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=33.51 E-value=20 Score=31.37 Aligned_cols=26 Identities=23% Similarity=0.265 Sum_probs=23.7
Q ss_pred eeeccCChhhHHHHHhc------CCcEEeccC
Q 035495 366 AFLSHCGWNSVLESLSQ------GLPTIGWPI 391 (427)
Q Consensus 366 ~~I~HgG~~s~~eal~~------GvP~v~~P~ 391 (427)
++|.=||-||+.++... ++|++++|.
T Consensus 38 ~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 38 IVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp EEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred EEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 89999999999999765 899999986
No 166
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=33.38 E-value=25 Score=31.36 Aligned_cols=34 Identities=15% Similarity=0.292 Sum_probs=26.6
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCC-EEEEEeC
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGF-KITIANT 42 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh-~Vt~~~~ 42 (427)
+++++|.|+-.+..| ..+|+.|++ .|| +|++...
T Consensus 22 ~~~~~I~iIG~G~mG-----~~~A~~L~~-~G~~~V~~~dr 56 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAA-----SAIASGLRQ-AGAIDMAAYDA 56 (312)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHH-HSCCEEEEECS
T ss_pred CCCCEEEEECccHHH-----HHHHHHHHH-CCCCeEEEEcC
Confidence 456899999887777 478999999 999 9998865
No 167
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=32.99 E-value=45 Score=24.29 Aligned_cols=29 Identities=14% Similarity=0.057 Sum_probs=23.1
Q ss_pred ccCHHHHHHHHHHHHhcC-CC-EEEEEeCCcc
Q 035495 16 HGHLIPFLALAKQIHRST-GF-KITIANTPLN 45 (427)
Q Consensus 16 ~GH~~P~l~La~~L~~~~-Gh-~Vt~~~~~~~ 45 (427)
.......+.+|..+.+ . || +|+++-...-
T Consensus 15 ~~~~~~al~~a~~~~~-~~g~~~v~vff~~dg 45 (117)
T 1jx7_A 15 SESLFNSLRLAIALRE-QESNLDLRLFLMSDA 45 (117)
T ss_dssp CSHHHHHHHHHHHHHH-HCTTCEEEEEECGGG
T ss_pred cHHHHHHHHHHHHHHh-cCCCccEEEEEEchH
Confidence 4556778999999999 8 99 9998876433
No 168
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=32.87 E-value=32 Score=28.37 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=25.1
Q ss_pred hhcccCcceeeccCChhhHHH---HHhcCCcEEeccC
Q 035495 358 ILSHKSTGAFLSHCGWNSVLE---SLSQGLPTIGWPI 391 (427)
Q Consensus 358 ll~~~~v~~~I~HgG~~s~~e---al~~GvP~v~~P~ 391 (427)
+...++. .++--||.||+.| ++.+|+|+++++.
T Consensus 115 m~~~sda-~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 115 LLRNADV-VVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHTTCSE-EEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHhCCE-EEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 4445554 7788899998765 5779999999973
No 169
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=32.76 E-value=39 Score=29.66 Aligned_cols=63 Identities=16% Similarity=0.224 Sum_probs=41.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccc---cchHhhh-cccCccee
Q 035495 292 ISSSQMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNW---APQLEIL-SHKSTGAF 367 (427)
Q Consensus 292 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~---vpq~~ll-~~~~v~~~ 367 (427)
.+...+..+++.+++.+..+++-.+...+ +. ..| ..-..++ .+++++.+
T Consensus 135 ~~d~~~~~~~~~a~e~glpv~iH~~~~~~------------~~---------------~~~~~p~~~~~v~~~~P~l~iv 187 (291)
T 3irs_A 135 VDDRRLYPLYAFCEDNGIPVIMMTGGNAG------------PD---------------ITYTNPEHIDRVLGDFPDLTVV 187 (291)
T ss_dssp TTCGGGHHHHHHHHHTTCCEEEECSSSCS------------SS---------------GGGGCHHHHHHHHHHCTTCCEE
T ss_pred CCCHHHHHHHHHHHHcCCeEEEeCCCCCC------------CC---------------CccCCHHHHHHHHHHCCCCEEE
Confidence 45567888999999999999888765310 00 001 0112233 36788889
Q ss_pred eccCChhhHHHHHh
Q 035495 368 LSHCGWNSVLESLS 381 (427)
Q Consensus 368 I~HgG~~s~~eal~ 381 (427)
|.|||...+.+++.
T Consensus 188 l~H~G~~~~~~~~~ 201 (291)
T 3irs_A 188 SSHGNWPWVQEIIH 201 (291)
T ss_dssp EEGGGTTCHHHHHH
T ss_pred eecCCcccHHHHHH
Confidence 99999887777665
No 170
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=32.74 E-value=48 Score=27.00 Aligned_cols=38 Identities=13% Similarity=0.268 Sum_probs=28.5
Q ss_pred cEEEEeCCCC--c-cCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 6 EHIGMLPLMA--H-GHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 6 ~~il~~~~p~--~-GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
.+|+++|.-+ . --.++...|++.|.+ +|.+|.|+.||.
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~-~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKK-EGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHH-cCCeEEEEeccc
Confidence 4677777321 1 235678899999999 999999998753
No 171
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=32.74 E-value=55 Score=26.34 Aligned_cols=42 Identities=17% Similarity=0.287 Sum_probs=27.9
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
|++.+..|+++...+.=.. =++.-...|.+ .|++|++++...
T Consensus 4 m~~t~~~v~il~~~gFe~~-E~~~p~~~l~~-ag~~V~~~s~~~ 45 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQDE-EYFESKKIFES-AGYKTKVSSTFI 45 (177)
T ss_dssp -CCCCEEEEECCSEEECHH-HHHHHHHHHHH-TTCEEEEEESSS
T ss_pred cccCCCEEEEECCCCccHH-HHHHHHHHHHH-CCCEEEEEECCC
Confidence 7766666666665544333 35566677899 999999998643
No 172
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=32.33 E-value=1.4e+02 Score=24.39 Aligned_cols=43 Identities=14% Similarity=0.067 Sum_probs=29.2
Q ss_pred Eeccccch-Hh-hhcccCcceeeccCChhhHHHH---H------hcCCcEEeccC
Q 035495 348 LVRNWAPQ-LE-ILSHKSTGAFLSHCGWNSVLES---L------SQGLPTIGWPI 391 (427)
Q Consensus 348 ~~~~~vpq-~~-ll~~~~v~~~I~HgG~~s~~ea---l------~~GvP~v~~P~ 391 (427)
++.+..+. .. +...++ ..++--||.||+-|. + .+++|++.+-.
T Consensus 82 ~~~~~~~~Rk~~~~~~sd-a~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 82 IEVNGMHERKAKMSELAD-GFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp EEESHHHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred ccCCCHHHHHHHHHHHCC-EEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 34466664 22 344555 488889999998765 5 37899999864
No 173
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=32.13 E-value=39 Score=25.99 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=28.8
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
.+++++..+. =+-|++.+++.|.+ +|.+|+++ ...
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~-~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQE-IGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHH-TTCEEEEE-EEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHh-cCCcEEEE-EeC
Confidence 4778777665 48899999999999 99999998 543
No 174
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=32.01 E-value=71 Score=27.29 Aligned_cols=38 Identities=13% Similarity=0.265 Sum_probs=27.0
Q ss_pred CcEEEEeCCCCcc-----------CHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 5 NEHIGMLPLMAHG-----------HLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 5 ~~~il~~~~p~~G-----------H~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
|+||+|+.....+ ...=++.-...|++ .|++|++++..
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~-aG~~V~iaS~~ 51 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEK-HGFEVDFVSET 51 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHT-TTCEEEEEESS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 4578877665322 22457777888999 99999999863
No 175
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=31.92 E-value=51 Score=28.16 Aligned_cols=42 Identities=14% Similarity=0.033 Sum_probs=30.1
Q ss_pred cHHHHHHHHhhhhhcCCCCcEEEecCCcc-------hHHHHHHHhCCceEEEe
Q 035495 106 KTPLYNLLMDIKEKAGKPPICIITDTFFG-------WAVDVAKSAGSTNVTFA 151 (427)
Q Consensus 106 ~~~~~~~l~~~~~~~~~~~D~vI~D~~~~-------~~~~~A~~lgiP~v~~~ 151 (427)
.+.+.++++.++ ..||+|++|-... .|..+.-.+|+|+|.+.
T Consensus 96 ~P~ll~al~~L~----~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 96 LPLIIEAAKKLE----TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp HHHHHHHHHHCS----SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHHhcC----CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 355566666665 3599999994332 26688888999999984
No 176
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=31.76 E-value=22 Score=30.81 Aligned_cols=29 Identities=21% Similarity=0.392 Sum_probs=25.4
Q ss_pred ccCcceeeccCChhhHHHHHhc---CCcEEeccC
Q 035495 361 HKSTGAFLSHCGWNSVLESLSQ---GLPTIGWPI 391 (427)
Q Consensus 361 ~~~v~~~I~HgG~~s~~eal~~---GvP~v~~P~ 391 (427)
.++ ++|+=||-||+.++... ++|+++++.
T Consensus 41 ~~D--~vv~~GGDGTll~~a~~~~~~~PilGIn~ 72 (258)
T 1yt5_A 41 TAD--LIVVVGGDGTVLKAAKKAADGTPMVGFKA 72 (258)
T ss_dssp CCS--EEEEEECHHHHHHHHTTBCTTCEEEEEES
T ss_pred CCC--EEEEEeCcHHHHHHHHHhCCCCCEEEEEC
Confidence 345 89999999999999887 899999985
No 177
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=31.69 E-value=51 Score=26.94 Aligned_cols=38 Identities=21% Similarity=0.294 Sum_probs=28.5
Q ss_pred cEEEEeCCCC--c-cCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 6 EHIGMLPLMA--H-GHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 6 ~~il~~~~p~--~-GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
.+|+++|.-+ . =-.++...|++.|.+ +|.+|.|+.||.
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~-~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTE-QGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHH-CCCeEEEEeCcc
Confidence 4677776321 1 235678899999999 999999998753
No 178
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=31.56 E-value=29 Score=30.63 Aligned_cols=30 Identities=13% Similarity=0.089 Sum_probs=25.3
Q ss_pred cccCcceeeccCChhhHHHHHh----cCCcEEeccC
Q 035495 360 SHKSTGAFLSHCGWNSVLESLS----QGLPTIGWPI 391 (427)
Q Consensus 360 ~~~~v~~~I~HgG~~s~~eal~----~GvP~v~~P~ 391 (427)
..++ ++|+-||-||+.+++. .++|+++++.
T Consensus 62 ~~~D--~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 62 QQAD--LAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHCS--EEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cCCC--EEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3456 8999999999999984 3899999985
No 179
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=31.29 E-value=49 Score=29.35 Aligned_cols=34 Identities=32% Similarity=0.497 Sum_probs=27.6
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
.++++|.|+-.+..| ..+|+.|++ .||+|++...
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~-~G~~V~~~dr 52 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLK-NGFKVTVWNR 52 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHH-CCCeEEEEeC
Confidence 346899999777666 568999999 9999998864
No 180
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=31.26 E-value=46 Score=29.06 Aligned_cols=32 Identities=13% Similarity=0.301 Sum_probs=25.6
Q ss_pred CcEEEEeCC-CCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 5 NEHIGMLPL-MAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 5 ~~~il~~~~-p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
+++|.|+-. +..| ..+|+.|++ +||+|+++..
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~-~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHD-SAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHH-SSSEEEEECC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHh-CCCEEEEEEC
Confidence 469999977 7666 457889999 9999997754
No 181
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=31.17 E-value=44 Score=29.63 Aligned_cols=31 Identities=16% Similarity=0.411 Sum_probs=27.2
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
|.||.|+-.+..|. ++|+.|.+ +||+|++..
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~-~G~~v~v~d 33 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLK-AGYLLNVFD 33 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHH-TTCEEEEEC
T ss_pred cCEEEEeeehHHHH-----HHHHHHHh-CCCeEEEEc
Confidence 45899999998884 78999999 999999885
No 182
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=31.09 E-value=47 Score=29.02 Aligned_cols=32 Identities=19% Similarity=0.442 Sum_probs=24.9
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
++++|.|+-.+..|. .+|+.|.+ .||+|+++.
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGS-----PMAINLAR-AGHQLHVTT 33 (295)
T ss_dssp --CEEEECCCSTTHH-----HHHHHHHH-TTCEEEECC
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHh-CCCEEEEEc
Confidence 457999998777775 47888999 999998765
No 183
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=31.08 E-value=56 Score=29.13 Aligned_cols=33 Identities=21% Similarity=0.404 Sum_probs=27.6
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
++++|.|+-.+..| ..+|+.|++ .||+|++...
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~-~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCE-AGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHH-TTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHh-CCCeEEEEcC
Confidence 35799999888887 678999999 9999998754
No 184
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=31.00 E-value=1.6e+02 Score=27.43 Aligned_cols=34 Identities=18% Similarity=0.088 Sum_probs=24.9
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
+.+|+++-. |. -.+.+++++++ .|++|.++.+..
T Consensus 6 ~~kiLI~g~---g~--~a~~i~~aa~~-~G~~~v~v~~~~ 39 (446)
T 3ouz_A 6 IKSILIANR---GE--IALRALRTIKE-MGKKAICVYSEA 39 (446)
T ss_dssp CCEEEECCC---HH--HHHHHHHHHHH-TTCEEEEEEEGG
T ss_pred cceEEEECC---CH--HHHHHHHHHHH-cCCEEEEEEcCc
Confidence 457777543 32 45799999999 999999886543
No 185
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=30.84 E-value=29 Score=26.49 Aligned_cols=34 Identities=12% Similarity=0.162 Sum_probs=27.0
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
+.||+++-.+..| ..+|+.|.+ +||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~-~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLA-SDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHH-TTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHH-CCCCEEEEECCH
Confidence 4688888776555 478999999 999999998643
No 186
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=30.78 E-value=73 Score=28.63 Aligned_cols=26 Identities=8% Similarity=0.127 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCC
Q 035495 293 SSSQMMELDIGLEASAKSFLWVITPP 318 (427)
Q Consensus 293 ~~~~~~~~~~a~~~~~~~~i~~~~~~ 318 (427)
+.+..+.+.++|.....+.||.+..+
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 45667789999999999999998776
No 187
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=30.17 E-value=1.2e+02 Score=28.34 Aligned_cols=26 Identities=15% Similarity=0.125 Sum_probs=19.8
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGF 35 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh 35 (427)
.+||||++-.++.-| +||+.|++ .++
T Consensus 2 ~~mkvlviG~ggre~-----ala~~l~~-s~~ 27 (431)
T 3mjf_A 2 NAMNILIIGNGGREH-----ALGWKAAQ-SPL 27 (431)
T ss_dssp -CEEEEEEECSHHHH-----HHHHHHTT-CTT
T ss_pred CCcEEEEECCCHHHH-----HHHHHHHh-CCC
Confidence 468999998886544 68999998 664
No 188
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=30.11 E-value=68 Score=26.60 Aligned_cols=42 Identities=10% Similarity=0.134 Sum_probs=28.3
Q ss_pred CCCCCcEEEEeCCCCccCHH---HHHHHHHHHHhcCCCEEEEEeCC
Q 035495 1 MGSENEHIGMLPLMAHGHLI---PFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~---P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
|+++++.|+++...+.+.-. -+..+++.|.+ +|++|.+...+
T Consensus 1 ~~~~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~-~g~~v~~~d~p 45 (243)
T 1ycd_A 1 MTVQIPKLLFLHGFLQNGKVFSEKSSGIRKLLKK-ANVQCDYIDAP 45 (243)
T ss_dssp --CCCCEEEEECCTTCCHHHHHHHTHHHHHHHHH-TTCEEEEECCS
T ss_pred CCCcCceEEEeCCCCccHHHHHHHHHHHHHHHhh-cceEEEEcCCC
Confidence 77677778887754443322 24478999999 89999988765
No 189
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=29.83 E-value=39 Score=29.32 Aligned_cols=42 Identities=7% Similarity=-0.046 Sum_probs=36.2
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHH--------HHhcC-CCEEEEEeCCcch
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQ--------IHRST-GFKITIANTPLNI 46 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~--------L~~~~-Gh~Vt~~~~~~~~ 46 (427)
++.+|++.+.++-.|-....-++.- |.. + |++|.+++...-.
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~-~~G~eVi~LG~~vp~ 169 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLER-YEMIDAYNLGSQVAN 169 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGG-CTTEEEEECCSSBCH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHh-cCCcEEEECCCCCCH
Confidence 4678999999999999999999977 999 8 9999999865433
No 190
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=29.80 E-value=35 Score=30.61 Aligned_cols=37 Identities=14% Similarity=0.195 Sum_probs=26.8
Q ss_pred CC-CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 1 MG-SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 1 m~-~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
|+ ++..+|.|+-.+..| ..+|..|++ +||+|++....
T Consensus 1 m~~~~~~kI~vIGaG~MG-----~~iA~~la~-~G~~V~l~d~~ 38 (319)
T 2dpo_A 1 MASPAAGDVLIVGSGLVG-----RSWAMLFAS-GGFRVKLYDIE 38 (319)
T ss_dssp ------CEEEEECCSHHH-----HHHHHHHHH-TTCCEEEECSC
T ss_pred CCCCCCceEEEEeeCHHH-----HHHHHHHHH-CCCEEEEEeCC
Confidence 54 445789999887777 478999999 99999998653
No 191
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=29.58 E-value=75 Score=22.93 Aligned_cols=31 Identities=13% Similarity=0.107 Sum_probs=21.8
Q ss_pred CCcEEEecCCcc--hHHHHHHHh-------CCceEEEecc
Q 035495 123 PPICIITDTFFG--WAVDVAKSA-------GSTNVTFATG 153 (427)
Q Consensus 123 ~~D~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 153 (427)
+||+||.|...+ .+..+.+.+ ++|++.++..
T Consensus 46 ~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 46 TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 499999997665 355555543 5788887654
No 192
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=29.20 E-value=60 Score=28.58 Aligned_cols=39 Identities=8% Similarity=-0.031 Sum_probs=32.7
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
+..|+|+.-++.|=..-...||..|++ +|++|.++-...
T Consensus 41 ~~vI~v~~KGGvGKTT~a~nLA~~La~-~G~~VlliD~D~ 79 (307)
T 3end_A 41 AKVFAVYGKGGIGKSTTSSNLSAAFSI-LGKRVLQIGCDP 79 (307)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHH-TTCCEEEEEESS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 345666677889999999999999999 999999997543
No 193
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=29.18 E-value=44 Score=29.39 Aligned_cols=47 Identities=6% Similarity=0.149 Sum_probs=33.6
Q ss_pred CCcEEEEeCCCCcc----CHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 4 ENEHIGMLPLMAHG----HLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 4 ~~~~il~~~~p~~G----H~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
.+|||+++..+..+ -+.....++++|.+ +||+|..+........+..
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~-~g~~v~~i~~~~~~~~~~~ 52 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDK-NKYEIVPITLNEKMDLIEK 52 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCT-TTEEEEEEECSSGGGHHHH
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHH-CCCEEEEEcccCchhHHHh
Confidence 57899988865322 23456689999999 9999999987654444444
No 194
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=29.08 E-value=2.5e+02 Score=23.34 Aligned_cols=104 Identities=13% Similarity=0.032 Sum_probs=0.0
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCC--CEEEEEeC-CcchHHhhhhhcCCCCCCCCCCceeEEEcCCCCCCCC
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTG--FKITIANT-PLNIQYLQNTISSANPNSPEKFNINLVELPFCSSDHG 79 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~G--h~Vt~~~~-~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 79 (427)
++++||+++..+..+- +.+|.+++.+ .+ ++|..+.+ .....-++.... .|+.+..++.....+
T Consensus 6 ~~~~ri~vl~SG~gsn---l~all~~~~~-~~~~~~I~~Vis~~~~a~~l~~A~~---------~gIp~~~~~~~~~~~- 71 (215)
T 3kcq_A 6 KKELRVGVLISGRGSN---LEALAKAFST-EESSVVISCVISNNAEARGLLIAQS---------YGIPTFVVKRKPLDI- 71 (215)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHTCC-C-CSEEEEEEEESCTTCTHHHHHHH---------TTCCEEECCBTTBCH-
T ss_pred CCCCEEEEEEECCcHH---HHHHHHHHHc-CCCCcEEEEEEeCCcchHHHHHHHH---------cCCCEEEeCcccCCh-
Q ss_pred CCCCCCCCccchhhHHHHHHHHhcCCcHHHHHHHHhhhhhcCCCCcEEEecCC-cchHHHHHHHhCCceEEEecc
Q 035495 80 LPPNTENTENLSLDLIINFFTSSQSPKTPLYNLLMDIKEKAGKPPICIITDTF-FGWAVDVAKSAGSTNVTFATG 153 (427)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vI~D~~-~~~~~~~A~~lgiP~v~~~~~ 153 (427)
+.+.+.+++.. +|+||+=.+ ......+-+.+.-.++.++++
T Consensus 72 ---------------------------~~~~~~L~~~~------~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 ---------------------------EHISTVLREHD------VDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp ---------------------------HHHHHHHHHTT------CSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---------------------------HHHHHHHHHhC------CCEEEEeCCceEeCHHHHhhccCCeEEECcc
No 195
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=28.95 E-value=33 Score=31.59 Aligned_cols=35 Identities=17% Similarity=0.219 Sum_probs=27.1
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
|++++.+|+++-.+..| +.+|..|++ +|++|+++-
T Consensus 2 M~~~~~dVvIVGaG~aG-----l~~A~~L~~-~G~~V~viE 36 (399)
T 2x3n_A 2 MTDNHIDVLINGCGIGG-----AMLAYLLGR-QGHRVVVVE 36 (399)
T ss_dssp ---CEEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEC
T ss_pred CCCCcCCEEEECcCHHH-----HHHHHHHHh-CCCcEEEEe
Confidence 45455789998887666 788999999 999999985
No 196
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=28.91 E-value=3.8e+02 Score=25.72 Aligned_cols=34 Identities=9% Similarity=0.255 Sum_probs=25.9
Q ss_pred HHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHh-------CCceEEE
Q 035495 108 PLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSA-------GSTNVTF 150 (427)
Q Consensus 108 ~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~l-------giP~v~~ 150 (427)
.+++++++.+ ||++|.+.. +..+|+++ |||++.+
T Consensus 425 ~l~~~i~~~~------pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFTRQ------PDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHHC------CSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhhcC------CCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 3455666655 999999863 57788888 9999875
No 197
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=28.67 E-value=44 Score=30.01 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=27.7
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
.+||.|+-.+..| ..+|..|++ .||+|++....
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~-~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHE-NGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHh-CCCeEEEEeCC
Confidence 4789999888877 478999999 99999998753
No 198
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=28.64 E-value=23 Score=33.77 Aligned_cols=34 Identities=24% Similarity=0.203 Sum_probs=28.1
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
..|||+++-.+-.|. .||+.|.+ .||+|+++-..
T Consensus 2 ~~M~iiI~G~G~vG~-----~la~~L~~-~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVGG-----TLAENLVG-ENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHTCS-TTEEEEEEESC
T ss_pred CcCEEEEECCCHHHH-----HHHHHHHH-CCCCEEEEECC
Confidence 468999988876664 68999999 99999998654
No 199
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=28.59 E-value=51 Score=28.99 Aligned_cols=33 Identities=15% Similarity=0.377 Sum_probs=27.1
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
++++|.|+-.+..|. .+|+.|++ .||+|++...
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~-~G~~V~~~d~ 34 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLK-AGYLLNVFDL 34 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHh-CCCeEEEEcC
Confidence 457999998888775 67999999 9999998854
No 200
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=28.56 E-value=61 Score=28.26 Aligned_cols=39 Identities=13% Similarity=0.141 Sum_probs=31.4
Q ss_pred CcEEEEeC--CCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 5 NEHIGMLP--LMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 5 ~~~il~~~--~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
|++++.+. -++.|=..-...||..|++ +|++|.++-...
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~-~G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLY-GGAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHH-CCCcEEEEECCC
Confidence 34555444 5788999999999999999 999999987665
No 201
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=28.41 E-value=53 Score=30.11 Aligned_cols=38 Identities=8% Similarity=0.076 Sum_probs=28.8
Q ss_pred CCcEEEEeCCCCcc-C---HHHHHHHHHHH-HhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHG-H---LIPFLALAKQI-HRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~G-H---~~P~l~La~~L-~~~~Gh~Vt~~~~ 42 (427)
+|+||+++..+..+ | +.....++++| .+ +||+|..+..
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~-~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEAT-GKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHH-SSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcc-cCcEEEEEEE
Confidence 36899998766444 3 34578899999 99 9999999864
No 202
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=28.23 E-value=51 Score=26.34 Aligned_cols=39 Identities=10% Similarity=0.270 Sum_probs=29.7
Q ss_pred cEEEEeCCCC--c-cCHHHHHHHHHHHHhcCCCEEEEEeCCcc
Q 035495 6 EHIGMLPLMA--H-GHLIPFLALAKQIHRSTGFKITIANTPLN 45 (427)
Q Consensus 6 ~~il~~~~p~--~-GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~ 45 (427)
.+|+++|.=+ . -=.++...|++.|.+ +|.+|.|+.+|..
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~-~G~~V~faIHPVA 72 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRA-RGINVRFGIHPVA 72 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHH-HCCEEEEEECSSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecccc
Confidence 5788887321 1 235688999999999 9999999988643
No 203
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=28.04 E-value=71 Score=31.02 Aligned_cols=44 Identities=9% Similarity=0.138 Sum_probs=29.3
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
|++.+-++++...- . .-++.+|+.|.+ .|+++. ++......++.
T Consensus 1 ~~~~~G~aLISV~D-K---~~iv~lAk~L~~-lGf~I~--ATgGTAk~L~e 44 (593)
T 1g8m_A 1 MAARQQLALLSVSE-K---AGLVEFARSLNA-LGLGLI--ASGGTATALRD 44 (593)
T ss_dssp ---CCCEEEEEESC-C---TTHHHHHHHHHH-TTCEEE--ECHHHHHHHHH
T ss_pred CCCCCCEEEEEEeC-c---HhHHHHHHHHHH-CCCEEE--EchHHHHHHHH
Confidence 55445566666554 2 337889999999 998865 56666777887
No 204
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=27.76 E-value=64 Score=28.24 Aligned_cols=35 Identities=23% Similarity=0.374 Sum_probs=25.8
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
|. ++++|.|+-.+..|. .+|+.|.+ .||+|+++..
T Consensus 1 M~-~~~~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~~ 35 (301)
T 3cky_A 1 ME-KSIKIGFIGLGAMGK-----PMAINLLK-EGVTVYAFDL 35 (301)
T ss_dssp ----CCEEEEECCCTTHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CC-CCCEEEEECccHHHH-----HHHHHHHH-CCCeEEEEeC
Confidence 54 457999998877775 46888999 9999987653
No 205
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=27.56 E-value=73 Score=28.26 Aligned_cols=34 Identities=9% Similarity=0.104 Sum_probs=25.7
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcC-C-CEEEEEeCC
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRST-G-FKITIANTP 43 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~-G-h~Vt~~~~~ 43 (427)
|++++|+++..+.. ..|++.|++ . | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~-~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVK-EFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHH-HCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHH-hcCCCEEEEEeCC
Confidence 46689999866654 478999988 5 6 888887653
No 206
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=27.41 E-value=34 Score=25.78 Aligned_cols=33 Identities=21% Similarity=0.443 Sum_probs=24.2
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
+.+|+++-.+..| ..+++.|.+ .|++|+++...
T Consensus 6 ~~~v~I~G~G~iG-----~~~a~~l~~-~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFG-----GSIVKELHR-MGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHH-TTCCCEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHH-CCCEEEEEeCC
Confidence 4578887654444 467899999 99999988653
No 207
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=27.28 E-value=1.3e+02 Score=25.89 Aligned_cols=39 Identities=15% Similarity=0.328 Sum_probs=30.4
Q ss_pred CeEEEEecCCcccCCHHHHHHHHHHHHh--CCCcEEEEEcC
Q 035495 279 ASVLHISFGSQNTISSSQMMELDIGLEA--SAKSFLWVITP 317 (427)
Q Consensus 279 ~~vV~vs~Gs~~~~~~~~~~~~~~a~~~--~~~~~i~~~~~ 317 (427)
+.+|+|++||......+.++.+.+.+++ .+..+-|....
T Consensus 10 ~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 10 TGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp EEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 5799999999876666788888888876 45778887664
No 208
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=27.20 E-value=1.2e+02 Score=25.43 Aligned_cols=41 Identities=15% Similarity=0.124 Sum_probs=28.0
Q ss_pred CC-CCCcEEEEeCC-----CCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 1 MG-SENEHIGMLPL-----MAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 1 m~-~~~~~il~~~~-----p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
|+ ..++||+|+.+ ++. ...=+......|.+ .|++|++++..
T Consensus 1 ~~~~~m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~-ag~~v~~~s~~ 47 (232)
T 1vhq_A 1 MSLITMKKIGVILSGCGVYDGS-EIHEAVLTLLAISR-SGAQAVCFAPD 47 (232)
T ss_dssp -----CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHH-TTCEEEEEECS
T ss_pred CccccCCeEEEEEccCCCCCCe-eHHHHHHHHHHHHH-CCCEEEEEecC
Confidence 44 44568998887 543 44556666778899 99999999864
No 209
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=27.19 E-value=1.1e+02 Score=22.22 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=28.1
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
+++||+++|..+.|-=.-.-.+-+.+.+ +|.++.+-.
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~-~gi~~~i~a 38 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEK-YEVPVIIEA 38 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHH-SCCSEEEEE
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHH-CCCCeEEEE
Confidence 3568999997766555556688888888 998877655
No 210
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=27.18 E-value=82 Score=22.88 Aligned_cols=37 Identities=11% Similarity=0.022 Sum_probs=28.4
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
+.|+|+++|..+.|+-.-.-.|-+.+.+ +|.++.+-+
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~-~gi~~~i~~ 39 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKS-KNINATIEA 39 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHH-HTCSEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHH-CCCCeEEEE
Confidence 4588999998888888666678888888 898765443
No 211
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=27.17 E-value=64 Score=28.09 Aligned_cols=41 Identities=10% Similarity=0.028 Sum_probs=32.9
Q ss_pred CCcEEEEeCCC---CccCHHHHHHHHHHHHhcCCCEEEEEeCCcc
Q 035495 4 ENEHIGMLPLM---AHGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (427)
Q Consensus 4 ~~~~il~~~~p---~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~ 45 (427)
.++|.+|++.+ +.|-=.-.-.|+..|.+ ||++||..--.++
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~-~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKS-CGLHVTSIKIDPY 64 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHH-TTCCEEEEEEECS
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHH-CCCcceeeecccc
Confidence 46799999965 55666778899999999 9999999875443
No 212
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=27.15 E-value=60 Score=26.30 Aligned_cols=39 Identities=18% Similarity=0.258 Sum_probs=26.7
Q ss_pred CCCCCcEEEEeCCCCccCHHHHH-HHHHHHHhcCCCEEEEEeC
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFL-ALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l-~La~~L~~~~Gh~Vt~~~~ 42 (427)
|. ++++|+++... .|+..-+. .+++.|.+ .|++|.++.-
T Consensus 1 M~-~mmkilii~~S-~g~T~~la~~i~~~l~~-~g~~v~~~~l 40 (199)
T 2zki_A 1 MS-CKPNILVLFYG-YGSIVELAKEIGKGAEE-AGAEVKIRRV 40 (199)
T ss_dssp ---CCCEEEEEECC-SSHHHHHHHHHHHHHHH-HSCEEEEEEC
T ss_pred CC-CCcEEEEEEeC-ccHHHHHHHHHHHHHHh-CCCEEEEEeh
Confidence 44 34688887776 88876655 45666777 7999988754
No 213
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=26.95 E-value=78 Score=28.65 Aligned_cols=41 Identities=17% Similarity=0.122 Sum_probs=34.9
Q ss_pred CCcEEEEeC-CCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcc
Q 035495 4 ENEHIGMLP-LMAHGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (427)
Q Consensus 4 ~~~~il~~~-~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~ 45 (427)
++.+|+|++ -++.|-..-...||..|++ +|++|.++.....
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~-~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAE-KGLKVVIVSTDPA 65 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHH-SSCCEEEEECCTT
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 445666665 6799999999999999999 9999999998774
No 214
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=26.92 E-value=54 Score=28.42 Aligned_cols=31 Identities=16% Similarity=0.102 Sum_probs=25.1
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
|||.|+-.+..|. .+|..|++ +||+|+++..
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQ-----LWLTALCK-QGHEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CeEEEECcCHHHH-----HHHHHHHh-CCCCEEEEEc
Confidence 3788887776663 68999999 9999999864
No 215
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=26.67 E-value=1e+02 Score=27.61 Aligned_cols=34 Identities=9% Similarity=-0.055 Sum_probs=24.9
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
+++||+|+-.|.. ..+.-++|.+ +||+|..+.+.
T Consensus 6 ~~mrivf~Gt~~f-----a~~~L~~L~~-~~~~v~~Vvt~ 39 (318)
T 3q0i_A 6 QSLRIVFAGTPDF-----AARHLAALLS-SEHEIIAVYTQ 39 (318)
T ss_dssp -CCEEEEECCSHH-----HHHHHHHHHT-SSSEEEEEECC
T ss_pred cCCEEEEEecCHH-----HHHHHHHHHH-CCCcEEEEEcC
Confidence 5789999987743 3455677888 89999877664
No 216
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=26.62 E-value=92 Score=28.10 Aligned_cols=72 Identities=11% Similarity=0.091 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCC
Q 035495 293 SSSQMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCG 372 (427)
Q Consensus 293 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG 372 (427)
+.+..+.+.+++.....+.||.+..+.+ -.++.++++.+.+-+++. .||-+.-
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-------------------------~~rlL~~lD~~~i~~~PK--~~~GySD 116 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGMN-------------------------SNSLLPYIDYDAFQNNPK--IMIGYSD 116 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-------------------------GGGGGGGSCHHHHHHSCC--EEEECGG
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccccc-------------------------HHHHhhhcChhHHhhCCe--EEEEech
Confidence 4566778999999999999999887620 011335555555555676 6888888
Q ss_pred hhhHHHHHh--cCCcEEeccC
Q 035495 373 WNSVLESLS--QGLPTIGWPI 391 (427)
Q Consensus 373 ~~s~~eal~--~GvP~v~~P~ 391 (427)
.-.++-|++ .|+..+-=|+
T Consensus 117 iTaL~~al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 117 ATALLLGIYAKTGIPTFYGPA 137 (336)
T ss_dssp GHHHHHHHHHHHCCCEEECCC
T ss_pred HHHHHHHHHHhcCceEEECCh
Confidence 877888877 4888877776
No 217
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=26.60 E-value=60 Score=26.82 Aligned_cols=32 Identities=16% Similarity=0.224 Sum_probs=25.2
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
+++|.|+-.+..| ..+|+.|++ +||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~-~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEI-AGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHH-CCCEEEEEcC
Confidence 5789888776666 567899999 9999998853
No 218
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=26.52 E-value=81 Score=25.45 Aligned_cols=38 Identities=18% Similarity=0.313 Sum_probs=26.5
Q ss_pred CCcEEEEeCCCCccCHHHHH-HHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHGHLIPFL-ALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l-~La~~L~~~~Gh~Vt~~~~ 42 (427)
.|++|+++-.-..|+..-+. .+++.|.+ .|++|.++.-
T Consensus 4 ~M~kilii~~S~~g~T~~la~~i~~~l~~-~g~~v~~~~l 42 (200)
T 2a5l_A 4 SSPYILVLYYSRHGATAEMARQIARGVEQ-GGFEARVRTV 42 (200)
T ss_dssp -CCEEEEEECCSSSHHHHHHHHHHHHHHH-TTCEEEEEBC
T ss_pred CcceEEEEEeCCCChHHHHHHHHHHHHhh-CCCEEEEEEh
Confidence 34578776655578776654 46777777 8999988754
No 219
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=26.38 E-value=1.1e+02 Score=23.59 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=31.8
Q ss_pred EeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 10 MLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 10 ~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
++..+..-.+.+.+.+|...++ .|++|+++-+-.-...+.+
T Consensus 13 I~~sg~~d~~~~a~~lA~~Aaa-~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 13 IVFSGTIDKLMPVGILTSGAAA-SGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp EECCCSHHHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHTBH
T ss_pred EEEcCCHHHHHHHHHHHHHHHH-cCCcEEEEEehHHHHHHhc
Confidence 4445567889999999999999 9999999988655544444
No 220
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=26.38 E-value=82 Score=26.94 Aligned_cols=38 Identities=8% Similarity=0.002 Sum_probs=25.4
Q ss_pred CCCcEEEEeCCCCc--cCHHHHHH-HHHHHHhcCCCEEEEEe
Q 035495 3 SENEHIGMLPLMAH--GHLIPFLA-LAKQIHRSTGFKITIAN 41 (427)
Q Consensus 3 ~~~~~il~~~~p~~--GH~~P~l~-La~~L~~~~Gh~Vt~~~ 41 (427)
+.+++|+++..-.+ |...-++. +++.+.+ .|++|.++-
T Consensus 32 ~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~-~g~eve~id 72 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEF-FGAEVKVFD 72 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHH-TTCEEEECC
T ss_pred CCCCeEEEEEccCCCCCHHHHHHHHHHHHHhh-CCCEEEEEE
Confidence 45678887775543 55555544 5666777 799988864
No 221
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=26.35 E-value=57 Score=26.66 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=22.7
Q ss_pred EEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 7 HIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 7 ~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
||+++- +.|.+- ..|+++|.+ +||+|+.++-.
T Consensus 2 kvlVtG--atG~iG--~~l~~~L~~-~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIG--ATGRAG--SRILEEAKN-RGHEVTAIVRN 33 (221)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHH-TTCEEEEEESC
T ss_pred eEEEEc--CCchhH--HHHHHHHHh-CCCEEEEEEcC
Confidence 666554 333332 578999999 99999998754
No 222
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=26.15 E-value=94 Score=23.63 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=26.9
Q ss_pred cEEEEeCCCCccCHHHHH-HHHHHHHhcCCCEEEEEeCCc
Q 035495 6 EHIGMLPLMAHGHLIPFL-ALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l-~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
++|+++-.-..|+..-+. .|++.|.+ +|++|.++....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~-~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAA-GGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHT-TTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHh-CCCeEEEEehhh
Confidence 466666655678876543 57778888 899999986543
No 223
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=26.14 E-value=97 Score=23.80 Aligned_cols=37 Identities=11% Similarity=0.138 Sum_probs=25.1
Q ss_pred CcEEEEe-CCCCccCH--HHHHHHHHHHHhcCCCEE-EEEeC
Q 035495 5 NEHIGML-PLMAHGHL--IPFLALAKQIHRSTGFKI-TIANT 42 (427)
Q Consensus 5 ~~~il~~-~~p~~GH~--~P~l~La~~L~~~~Gh~V-t~~~~ 42 (427)
+|+++|+ ..+-+|+- .-.+.+|+++.+ .||+| +++-.
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala-~g~eV~~VFf~ 52 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIA-DGHELSSVFFY 52 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHH-TTCEEEEEEEC
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHH-CCCccCEEEEe
Confidence 3555544 34445544 446788999999 99999 77765
No 224
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=26.13 E-value=63 Score=27.63 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=31.1
Q ss_pred EEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 7 HIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 7 ~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
.|.|..-++.|-..-...||..|++ +|++|.++-..
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~-~G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHA-MGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHT-TTCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHH-CCCcEEEEcCC
Confidence 5667667889999999999999999 99999998644
No 225
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=26.11 E-value=56 Score=28.76 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=22.6
Q ss_pred EEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 7 HIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 7 ~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
+|+++- +.|.+ -..++++|.+ +||+|+.++-.
T Consensus 13 ~ilVtG--atG~i--G~~l~~~L~~-~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIFG--GTGYI--GNHMVKGSLK-LGHPTYVFTRP 44 (318)
T ss_dssp CEEEET--TTSTT--HHHHHHHHHH-TTCCEEEEECT
T ss_pred eEEEEC--CCchH--HHHHHHHHHH-CCCcEEEEECC
Confidence 666653 33333 2468899999 99999998754
No 226
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=26.11 E-value=1.1e+02 Score=27.18 Aligned_cols=74 Identities=14% Similarity=0.235 Sum_probs=52.9
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhc-ccCcceeecc
Q 035495 292 ISSSQMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILS-HKSTGAFLSH 370 (427)
Q Consensus 292 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~-~~~v~~~I~H 370 (427)
.+.+..+.+.+++.....+.||.+..+.+ -.++.++++.+.+-+ ++. .||-+
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyg-------------------------a~rlLp~LD~~~i~~a~PK--~~iGy 116 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYG-------------------------CGQLLPGLDWGRLQAASPR--PLIGF 116 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSC-------------------------GGGGTTTCCHHHHHHSCCC--CEEEC
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcC-------------------------HHHHhhccchhhhhccCCC--EEEEE
Confidence 34567788999999999999999887620 011335565555555 676 68888
Q ss_pred CChhhHHHHHh-cCCcEEeccCc
Q 035495 371 CGWNSVLESLS-QGLPTIGWPIA 392 (427)
Q Consensus 371 gG~~s~~eal~-~GvP~v~~P~~ 392 (427)
.-.-.++-|++ .|++.+-=|+.
T Consensus 117 SDiTaL~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 117 SDISVLLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp GGGHHHHHHHHHTTCCEEECCCG
T ss_pred chhHHHHHHHHHcCCcEEECHhh
Confidence 88888888886 48888777754
No 227
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=26.04 E-value=39 Score=30.19 Aligned_cols=33 Identities=6% Similarity=0.072 Sum_probs=27.6
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCC-CEEEEEeCC
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTG-FKITIANTP 43 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~G-h~Vt~~~~~ 43 (427)
+++|.|+-.+..| ..+|+.|++ .| |+|++....
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~-~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGG-RNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHT-TTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHH-cCCCeEEEEeCC
Confidence 4689999888777 678999999 99 999988643
No 228
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=25.93 E-value=1.3e+02 Score=21.68 Aligned_cols=37 Identities=22% Similarity=0.313 Sum_probs=26.3
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
|++++++|+++- .+-.-...+...|.. .|++|..+..
T Consensus 1 m~m~~~~ilivd----d~~~~~~~l~~~L~~-~g~~v~~~~~ 37 (132)
T 2rdm_A 1 MSLEAVTILLAD----DEAILLLDFESTLTD-AGFLVTAVSS 37 (132)
T ss_dssp -CCSSCEEEEEC----SSHHHHHHHHHHHHH-TTCEEEEESS
T ss_pred CCCCCceEEEEc----CcHHHHHHHHHHHHH-cCCEEEEECC
Confidence 677788998884 344555677888888 8999886543
No 229
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=25.84 E-value=31 Score=32.89 Aligned_cols=29 Identities=21% Similarity=0.300 Sum_probs=23.8
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEE
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIA 40 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~ 40 (427)
+||+++-.+-.| |.-|..|++ +||+|+++
T Consensus 2 k~VvVIGaG~~G-----L~aA~~La~-~G~~V~Vl 30 (501)
T 4dgk_A 2 KPTTVIGAGFGG-----LALAIRLQA-AGIPVLLL 30 (501)
T ss_dssp CCEEEECCHHHH-----HHHHHHHHH-TTCCEEEE
T ss_pred CCEEEECCcHHH-----HHHHHHHHH-CCCcEEEE
Confidence 478888766555 777888999 99999997
No 230
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=25.75 E-value=43 Score=30.21 Aligned_cols=38 Identities=5% Similarity=0.052 Sum_probs=28.0
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCC-EEEEEeCCc
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGF-KITIANTPL 44 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh-~Vt~~~~~~ 44 (427)
|..+++||.++-.+..|.. ||..|+. .|| +|+++-...
T Consensus 5 ~~~~~~kI~VIGaG~vG~~-----lA~~la~-~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGT-----MGYLCAL-RELADVVLYDVVK 43 (331)
T ss_dssp CCSCCCEEEEECCSHHHHH-----HHHHHHH-HTCCEEEEECSSS
T ss_pred cCCCCCEEEEECCCHHHHH-----HHHHHHh-CCCCeEEEEECCh
Confidence 3445679999976555544 8899999 899 988886543
No 231
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=25.73 E-value=1.1e+02 Score=26.37 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=27.3
Q ss_pred cEEEEeCCCC--ccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhh
Q 035495 6 EHIGMLPLMA--HGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQ 50 (427)
Q Consensus 6 ~~il~~~~p~--~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~ 50 (427)
-++++++..+ .| + -.++|++|++ +|++|.++.-....+.++
T Consensus 26 ~k~vlVTGasg~~G-I--G~~ia~~l~~-~G~~V~~~~r~~~~~~~~ 68 (280)
T 3nrc_A 26 GKKILITGLLSNKS-I--AYGIAKAMHR-EGAELAFTYVGQFKDRVE 68 (280)
T ss_dssp TCEEEECCCCSTTC-H--HHHHHHHHHH-TTCEEEEEECTTCHHHHH
T ss_pred CCEEEEECCCCCCC-H--HHHHHHHHHH-cCCEEEEeeCchHHHHHH
Confidence 3567777643 21 1 2679999999 999999987654333333
No 232
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=25.51 E-value=64 Score=28.29 Aligned_cols=39 Identities=15% Similarity=0.300 Sum_probs=23.6
Q ss_pred CCCCCcEEEEeCCCCccCHHH-HHHHHHHHHhcCCCEEEEE
Q 035495 1 MGSENEHIGMLPLMAHGHLIP-FLALAKQIHRSTGFKITIA 40 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P-~l~La~~L~~~~Gh~Vt~~ 40 (427)
|...++||+++..|..++... ...+.+.|.+ +|++|.+.
T Consensus 1 m~~~mkki~ii~np~~~~~~~~~~~i~~~l~~-~g~~v~~~ 40 (292)
T 2an1_A 1 MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCD-QGYEVIVE 40 (292)
T ss_dssp ---CCCEEEEECC-------CHHHHHHHHHHH-TTCEEEEE
T ss_pred CCCcCcEEEEEEcCCCHHHHHHHHHHHHHHHH-CCCEEEEe
Confidence 554567899999988766554 5568888999 99998875
No 233
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=25.42 E-value=15 Score=18.55 Aligned_cols=17 Identities=41% Similarity=0.716 Sum_probs=13.9
Q ss_pred ChhhHHHHHhcCCcEEe
Q 035495 372 GWNSVLESLSQGLPTIG 388 (427)
Q Consensus 372 G~~s~~eal~~GvP~v~ 388 (427)
|.|++..-|+.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888999988765
No 234
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=25.38 E-value=1.1e+02 Score=22.86 Aligned_cols=25 Identities=16% Similarity=0.038 Sum_probs=21.1
Q ss_pred cCHHHHHHHHHHHHhcCCCEE-EEEeC
Q 035495 17 GHLIPFLALAKQIHRSTGFKI-TIANT 42 (427)
Q Consensus 17 GH~~P~l~La~~L~~~~Gh~V-t~~~~ 42 (427)
-.....+.+|.++.+ .||+| +++-.
T Consensus 15 ~~~~~al~~a~a~~~-~g~~v~~vff~ 40 (130)
T 2hy5_A 15 QASDSAYQFAKAALE-KGHEIFRVFFY 40 (130)
T ss_dssp THHHHHHHHHHHHHH-TTCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHh-cCCeeCEEEEe
Confidence 456678999999999 99999 88765
No 235
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=25.36 E-value=1.4e+02 Score=28.05 Aligned_cols=33 Identities=27% Similarity=0.385 Sum_probs=26.5
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
+..||+|+-.+..| +.+|+.|++ +||+|+..-.
T Consensus 8 ~~k~v~viG~G~sG-----~s~A~~l~~-~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSG-----EAAARLLAK-LGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTH-----HHHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHh-CCCEEEEEeC
Confidence 35789999887655 346999999 9999999864
No 236
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=25.30 E-value=87 Score=27.42 Aligned_cols=39 Identities=13% Similarity=0.271 Sum_probs=29.9
Q ss_pred CCCcEEEEeCCCCccCHHHH--HHHHHHHHhcCC-CEEEEEeCC
Q 035495 3 SENEHIGMLPLMAHGHLIPF--LALAKQIHRSTG-FKITIANTP 43 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~--l~La~~L~~~~G-h~Vt~~~~~ 43 (427)
.++.|||+++. ..+|-.+. -.|++.|.+ .| .+|++...+
T Consensus 2 ~~~~kvLiv~G-~~~H~~~~~~~~l~~~l~~-~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLITG-QNNHNWQVSHVVLKQILEN-SGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEES-CCSSCHHHHHHHHHHHHHH-TTSEEEEEEECC
T ss_pred CCceEEEEEcC-CCCCChHHHHHHHHHHHHh-cCCEEEEEEeCC
Confidence 46799999954 44886554 578888888 88 999999764
No 237
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=25.08 E-value=62 Score=28.30 Aligned_cols=34 Identities=9% Similarity=0.108 Sum_probs=23.7
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
+++|+++- +.|.+- ..++++|.+ +||+|+.++-.
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~-~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVG--GTGYIG--KRIVNASIS-LGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHH-TTCCEEEECCS
T ss_pred CCEEEEEc--CCcHHH--HHHHHHHHh-CCCcEEEEECC
Confidence 45677664 333332 467899999 99999998754
No 238
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=25.03 E-value=2.6e+02 Score=22.29 Aligned_cols=117 Identities=14% Similarity=0.142 Sum_probs=65.6
Q ss_pred eEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEe---ccccchH
Q 035495 280 SVLHISFGSQNTISSSQMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLV---RNWAPQL 356 (427)
Q Consensus 280 ~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~---~~~vpq~ 356 (427)
.+++.--|+..... .-.+++.|.+.+.++-.....+- .+.+.....+... . .++. ..|+++.
T Consensus 7 ~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~A---------~~fi~~~~l~~l~--~-~v~~~~~~~~~~hi 71 (175)
T 3qjg_A 7 NVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTNG---------RKFINGEILKQFC--D-NYYDEFEDPFLNHV 71 (175)
T ss_dssp EEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTGG---------GGGSCHHHHHHHC--S-CEECTTTCTTCCHH
T ss_pred EEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcCH---------HHHhhHHHHHHhc--C-CEEecCCCCccccc
Confidence 34444445554322 34466666767777766655431 1222222122222 2 3332 1456777
Q ss_pred hhhcccCcceeeccCChhhHHH-------------HHhcCCcEEeccCcc----cc---hhhHHHHHhhhceeEEEec
Q 035495 357 EILSHKSTGAFLSHCGWNSVLE-------------SLSQGLPTIGWPIAA----EQ---TYNSKMLVEEMGVAVEMTR 414 (427)
Q Consensus 357 ~ll~~~~v~~~I~HgG~~s~~e-------------al~~GvP~v~~P~~~----DQ---~~na~~v~~~lG~G~~l~~ 414 (427)
.+-..++. ++|.-|=.||+.. ++..++|++++|... .. ..|-.++.+ +|+= .+++
T Consensus 72 ~l~~~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~-iv~P 146 (175)
T 3qjg_A 72 DIANKHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVS-IYPA 146 (175)
T ss_dssp HHHHTCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCE-ECCC
T ss_pred cccchhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCE-EECC
Confidence 77666775 7888887776543 477899999999532 22 456777888 4863 3443
No 239
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=24.79 E-value=50 Score=29.87 Aligned_cols=38 Identities=16% Similarity=0.221 Sum_probs=24.8
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
|++++++|+++ ++.|.+- ..|+++|.+ +||+|+.++-.
T Consensus 1 M~~~~~~ilVt--GatG~iG--~~l~~~L~~-~g~~V~~~~R~ 38 (352)
T 1xgk_A 1 MAQQKKTIAVV--GATGRQG--ASLIRVAAA-VGHHVRAQVHS 38 (352)
T ss_dssp --CCCCCEEEE--STTSHHH--HHHHHHHHH-TTCCEEEEESC
T ss_pred CCCCCCEEEEE--CCCCHHH--HHHHHHHHh-CCCEEEEEECC
Confidence 55445667665 3344332 467899999 99999998743
No 240
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=24.76 E-value=81 Score=30.09 Aligned_cols=35 Identities=20% Similarity=0.164 Sum_probs=29.6
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcC-CC-EEEEEeCCc
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRST-GF-KITIANTPL 44 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~-Gh-~Vt~~~~~~ 44 (427)
+.++|.|+-.+..| +.+|..|++ . || +|+++....
T Consensus 17 ~~mkIaVIGlG~mG-----~~lA~~la~-~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 17 PIKKIGVLGMGYVG-----IPAAVLFAD-APCFEKVLGFQRNS 53 (478)
T ss_dssp SCCEEEEECCSTTH-----HHHHHHHHH-STTCCEEEEECCCC
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHH-hCCCCeEEEEECCh
Confidence 46799999988888 578999999 9 99 999987543
No 241
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=24.64 E-value=47 Score=29.46 Aligned_cols=37 Identities=11% Similarity=0.180 Sum_probs=27.2
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
|.+++.+|+++-.+..| +..|..|++ +|++|+++-..
T Consensus 1 m~~~~~~vvIIG~G~aG-----l~aA~~l~~-~g~~v~lie~~ 37 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTG-----LFAGFYVGM-RGLSFRFVDPL 37 (335)
T ss_dssp --CCEEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEESS
T ss_pred CCCCcCcEEEECCCHHH-----HHHHHHHHh-CCCCEEEEeCC
Confidence 43455788888776555 578888999 99999999753
No 242
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=24.61 E-value=76 Score=26.62 Aligned_cols=33 Identities=0% Similarity=-0.186 Sum_probs=23.2
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
.+.++++..+.| --..+|++|++ +|++|.++.-
T Consensus 7 ~k~vlVTGas~g---IG~~ia~~l~~-~G~~V~~~~r 39 (241)
T 1dhr_A 7 ARRVLVYGGRGA---LGSRCVQAFRA-RNWWVASIDV 39 (241)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHT-TTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHh-CCCEEEEEeC
Confidence 345556554432 34688999999 9999998764
No 243
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=24.47 E-value=53 Score=28.99 Aligned_cols=35 Identities=14% Similarity=0.063 Sum_probs=24.1
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
++++|+++- +.|.+- ..++++|.+ +||+|+.++-.
T Consensus 3 ~~~~ilVtG--atG~iG--~~l~~~L~~-~g~~V~~~~R~ 37 (321)
T 3c1o_A 3 HMEKIIIYG--GTGYIG--KFMVRASLS-FSHPTFIYARP 37 (321)
T ss_dssp -CCCEEEET--TTSTTH--HHHHHHHHH-TTCCEEEEECC
T ss_pred cccEEEEEc--CCchhH--HHHHHHHHh-CCCcEEEEECC
Confidence 456676664 334432 368899999 99999998854
No 244
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=24.46 E-value=65 Score=26.45 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=22.5
Q ss_pred EEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 7 HIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 7 ~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
||+++- +.|.+- ..|+++|.+ +||+|+.++-.
T Consensus 2 kilVtG--atG~iG--~~l~~~L~~-~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLG--ATGRAG--SAIVAEARR-RGHEVLAVVRD 33 (224)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHH-TTCEEEEEESC
T ss_pred EEEEEc--CCCHHH--HHHHHHHHH-CCCEEEEEEec
Confidence 555553 334332 578999999 99999998753
No 245
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=24.44 E-value=88 Score=29.49 Aligned_cols=41 Identities=15% Similarity=0.248 Sum_probs=35.1
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchH
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQ 47 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~ 47 (427)
.-|+++..++.|-..-...||..|++ +|++|.++....++.
T Consensus 101 ~vIlivG~~G~GKTTt~~kLA~~l~~-~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 101 TILLMVGIQGSGKTTTVAKLARYFQK-RGYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHT-TTCCEEEEECCCSST
T ss_pred eEEEEECcCCCCHHHHHHHHHHHHHH-CCCeEEEEeCCCcch
Confidence 44566678899999999999999999 999999999877654
No 246
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=24.32 E-value=66 Score=28.13 Aligned_cols=37 Identities=11% Similarity=0.131 Sum_probs=27.5
Q ss_pred cEEEEeCCCCccC---HHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 6 EHIGMLPLMAHGH---LIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 6 ~~il~~~~p~~GH---~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
|||+++..+.... ......++++|.+ +||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~-~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQR-RGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHH-TTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHH-CCCEEEEEchh
Confidence 5899999774321 2334679999999 99999998753
No 247
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=24.25 E-value=72 Score=28.11 Aligned_cols=30 Identities=27% Similarity=0.479 Sum_probs=25.5
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
.||.|+-.+..|. ++|+.|.+ +||+|++.-
T Consensus 6 ~kIgfIGLG~MG~-----~mA~~L~~-~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLGT-----PIAEILLE-AGYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHH-TTCEEEEC-
T ss_pred CcEEEEecHHHHH-----HHHHHHHH-CCCeEEEEe
Confidence 4799999888884 79999999 999999864
No 248
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=23.84 E-value=98 Score=29.66 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=27.6
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
+++++.. ++=.-++.+|+.|.+ .|.++. ++......+++
T Consensus 25 ~raLISV----~DK~glv~~Ak~L~~-lGfeI~--ATgGTak~L~e 63 (534)
T 4ehi_A 25 MRALLSV----SDKEGIVEFGKELEN-LGFEIL--STGGTFKLLKE 63 (534)
T ss_dssp CEEEEEE----SSCTTHHHHHHHHHH-TTCEEE--ECHHHHHHHHH
T ss_pred cEEEEEE----cccccHHHHHHHHHH-CCCEEE--EccHHHHHHHH
Confidence 3455444 344458899999999 998874 56666777888
No 249
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=23.83 E-value=1.2e+02 Score=22.31 Aligned_cols=31 Identities=13% Similarity=0.149 Sum_probs=20.9
Q ss_pred CCcEEEecCCcch--HHHHHHHh-------CCceEEEecc
Q 035495 123 PPICIITDTFFGW--AVDVAKSA-------GSTNVTFATG 153 (427)
Q Consensus 123 ~~D~vI~D~~~~~--~~~~A~~l-------giP~v~~~~~ 153 (427)
.||+||.|..++. +..+.+.+ .+|++.+...
T Consensus 48 ~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~ 87 (136)
T 3t6k_A 48 LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQ 87 (136)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecC
Confidence 3999999976653 55444433 5788877654
No 250
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=23.77 E-value=64 Score=26.83 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=22.4
Q ss_pred EEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 7 HIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 7 ~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
+.++++..+ |-+ -..++++|++ +||+|.++.-.
T Consensus 6 k~vlVtGas-ggi--G~~~a~~l~~-~G~~V~~~~r~ 38 (234)
T 2ehd_A 6 GAVLITGAS-RGI--GEATARLLHA-KGYRVGLMARD 38 (234)
T ss_dssp CEEEESSTT-SHH--HHHHHHHHHH-TTCEEEEEESC
T ss_pred CEEEEECCC-cHH--HHHHHHHHHH-CCCEEEEEECC
Confidence 344555443 322 3689999999 99999988643
No 251
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=23.71 E-value=30 Score=28.97 Aligned_cols=32 Identities=25% Similarity=0.226 Sum_probs=25.4
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
++++|.|+-.+..| ..+|+.|++ .||+|+++.
T Consensus 22 ~mmkI~IIG~G~mG-----~~la~~l~~-~g~~V~~v~ 53 (220)
T 4huj_A 22 SMTTYAIIGAGAIG-----SALAERFTA-AQIPAIIAN 53 (220)
T ss_dssp GSCCEEEEECHHHH-----HHHHHHHHH-TTCCEEEEC
T ss_pred cCCEEEEECCCHHH-----HHHHHHHHh-CCCEEEEEE
Confidence 46789998766666 468999999 999999844
No 252
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=23.68 E-value=91 Score=27.77 Aligned_cols=38 Identities=18% Similarity=0.052 Sum_probs=33.1
Q ss_pred cEEEEeC-CCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 6 EHIGMLP-LMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 6 ~~il~~~-~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
.+|+|++ -++.|-..-...||..|++ +|++|.++....
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~-~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMAR-SGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHH-TTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 4566555 6799999999999999999 999999999876
No 253
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=23.66 E-value=1.1e+02 Score=26.49 Aligned_cols=39 Identities=10% Similarity=0.085 Sum_probs=28.5
Q ss_pred HHHHHHhhhhhcCCCCcEEEecCCcc------hHHHHHHHhCCceEEEecc
Q 035495 109 LYNLLMDIKEKAGKPPICIITDTFFG------WAVDVAKSAGSTNVTFATG 153 (427)
Q Consensus 109 ~~~~l~~~~~~~~~~~D~vI~D~~~~------~~~~~A~~lgiP~v~~~~~ 153 (427)
+..++++.. ||+|++-.... .+..+|++||+|.+...+.
T Consensus 104 La~~i~~~~------~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 104 LTEVIKKEA------PDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHC------CSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHhcC------CCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 344555544 99999775442 5789999999999997653
No 254
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=23.34 E-value=2.8e+02 Score=24.27 Aligned_cols=26 Identities=15% Similarity=0.017 Sum_probs=22.8
Q ss_pred eeeccCChhhHHHHHh------cCCcEEeccC
Q 035495 366 AFLSHCGWNSVLESLS------QGLPTIGWPI 391 (427)
Q Consensus 366 ~~I~HgG~~s~~eal~------~GvP~v~~P~ 391 (427)
++|.-||-||+.|++. .++|+.++|.
T Consensus 66 ~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 66 LIIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 7999999999999864 5799999997
No 255
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=23.19 E-value=1.8e+02 Score=26.02 Aligned_cols=26 Identities=12% Similarity=0.087 Sum_probs=22.5
Q ss_pred eeeccCChhhHHHHHh------cCCcEEeccC
Q 035495 366 AFLSHCGWNSVLESLS------QGLPTIGWPI 391 (427)
Q Consensus 366 ~~I~HgG~~s~~eal~------~GvP~v~~P~ 391 (427)
++|.-||-||+.|++. .++|+.++|.
T Consensus 83 ~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 83 VLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 7999999999999853 4789999997
No 256
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=23.03 E-value=1.7e+02 Score=24.00 Aligned_cols=44 Identities=16% Similarity=0.105 Sum_probs=29.3
Q ss_pred EEeccccch--HhhhcccCcceeeccCChhhHHHHHh---------cCCcEEeccC
Q 035495 347 LLVRNWAPQ--LEILSHKSTGAFLSHCGWNSVLESLS---------QGLPTIGWPI 391 (427)
Q Consensus 347 v~~~~~vpq--~~ll~~~~v~~~I~HgG~~s~~eal~---------~GvP~v~~P~ 391 (427)
.++.+.... ..+..+++. .++--||.||+-|... +++|++.+-.
T Consensus 101 ~i~~~~~~~Rk~~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 101 LIVTDTMRERKREMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred eEEcCCHHHHHHHHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 344455553 334455664 7788899999888743 6999998853
No 257
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=23.00 E-value=3.7e+02 Score=23.28 Aligned_cols=30 Identities=23% Similarity=0.222 Sum_probs=23.2
Q ss_pred CCcEEEecCCcc--hHHHHHHHhCCceEEEec
Q 035495 123 PPICIITDTFFG--WAVDVAKSAGSTNVTFAT 152 (427)
Q Consensus 123 ~~D~vI~D~~~~--~~~~~A~~lgiP~v~~~~ 152 (427)
+..+|+++.... .+-.+|+..|++++.+.+
T Consensus 228 ~v~~if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 228 NVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp TCCEEEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 399999997555 345889999999987654
No 258
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=22.98 E-value=1.4e+02 Score=23.84 Aligned_cols=39 Identities=8% Similarity=0.072 Sum_probs=31.8
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcc
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLN 45 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~ 45 (427)
..|.|+...+.|-..-+..|+..|.. +|++|.++.+...
T Consensus 5 ~~i~i~G~sGsGKTTl~~~L~~~l~~-~g~~v~~ik~~~~ 43 (169)
T 1xjc_A 5 NVWQVVGYKHSGKTTLMEKWVAAAVR-EGWRVGTVKHHGH 43 (169)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHH-TTCCEEEEECCC-
T ss_pred EEEEEECCCCCCHHHHHHHHHHhhHh-cCCeeeEEEeCCC
Confidence 34566667788999999999999999 9999999986543
No 259
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=22.78 E-value=83 Score=28.61 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=23.8
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
++++|+++- +.|-+ -..|+++|.+ +||+|+.+.-
T Consensus 28 ~~~~vlVtG--atG~i--G~~l~~~L~~-~g~~V~~~~r 61 (379)
T 2c5a_A 28 ENLKISITG--AGGFI--ASHIARRLKH-EGHYVIASDW 61 (379)
T ss_dssp SCCEEEEET--TTSHH--HHHHHHHHHH-TTCEEEEEES
T ss_pred cCCeEEEEC--CccHH--HHHHHHHHHH-CCCeEEEEEC
Confidence 456776663 33433 2578899999 9999999874
No 260
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=22.69 E-value=1.1e+02 Score=25.93 Aligned_cols=34 Identities=12% Similarity=0.254 Sum_probs=24.9
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
-++++++..+.| --..+|++|++ +|++|.++.-.
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~-~G~~V~~~~r~ 62 (262)
T 3rkr_A 29 GQVAVVTGASRG---IGAAIARKLGS-LGARVVLTARD 62 (262)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHH-TTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHH-CCCEEEEEECC
Confidence 356777766543 34688999999 99999888643
No 261
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=22.64 E-value=1.5e+02 Score=24.98 Aligned_cols=38 Identities=8% Similarity=0.155 Sum_probs=27.5
Q ss_pred CcEEEEeCCCCc-----------cCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 5 NEHIGMLPLMAH-----------GHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 5 ~~~il~~~~p~~-----------GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
|+||+|+..... -...=+......|.+ .|++|++++..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~-ag~~v~~~s~~ 51 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRK-EGFEVDFVSET 51 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHH-TTCEEEEECSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHH-CCCEEEEECCC
Confidence 357888775422 144567777888999 99999999864
No 262
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=22.63 E-value=98 Score=23.12 Aligned_cols=31 Identities=16% Similarity=0.126 Sum_probs=20.9
Q ss_pred CCcEEEecCCcch--HHHHHHHh---------CCceEEEecc
Q 035495 123 PPICIITDTFFGW--AVDVAKSA---------GSTNVTFATG 153 (427)
Q Consensus 123 ~~D~vI~D~~~~~--~~~~A~~l---------giP~v~~~~~ 153 (427)
+||+||.|...+. +..+.+.+ .+|.+.+...
T Consensus 58 ~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 58 DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 3999999976653 55555544 2787777654
No 263
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=22.49 E-value=37 Score=28.24 Aligned_cols=32 Identities=13% Similarity=0.122 Sum_probs=23.7
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
|||+++-. |.+ -..+|+.|.+ +||+|+++...
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~-~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLS-RKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHH-TTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHh-CCCeEEEEECC
Confidence 36777754 332 3578999999 99999999754
No 264
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=22.45 E-value=83 Score=27.32 Aligned_cols=38 Identities=13% Similarity=0.093 Sum_probs=31.9
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
..|+|..-++.|-..-...||..|++ +|++|.++-...
T Consensus 3 kvIavs~KGGvGKTT~a~nLA~~La~-~G~rVlliD~D~ 40 (289)
T 2afh_E 3 RQCAIYGKGGIGKSTTTQNLVAALAE-MGKKVMIVGCDP 40 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHH-TTCCEEEEEECS
T ss_pred eEEEEeCCCcCcHHHHHHHHHHHHHH-CCCeEEEEecCC
Confidence 35666667889999999999999999 999999986543
No 265
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=22.42 E-value=81 Score=27.40 Aligned_cols=32 Identities=31% Similarity=0.491 Sum_probs=25.4
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
++|.|+-.+..| ..+|+.|++ +||+|++....
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~-~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVK-AGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHH-CCCeEEEEcCC
Confidence 588888776666 467999999 99999987643
No 266
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=22.38 E-value=92 Score=24.95 Aligned_cols=32 Identities=22% Similarity=0.339 Sum_probs=23.2
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
++|+++ ++.|-+ -..++++|.+ +||+|+.++-
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~-~g~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQ-AGYEVTVLVR 35 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHH-CCCeEEEEEe
Confidence 567665 333433 3578999999 9999999874
No 267
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=22.32 E-value=89 Score=25.68 Aligned_cols=33 Identities=12% Similarity=0.061 Sum_probs=28.1
Q ss_pred EEEEeC-CCCccCHHHHHHHHHHHHhcCCCEEEEE
Q 035495 7 HIGMLP-LMAHGHLIPFLALAKQIHRSTGFKITIA 40 (427)
Q Consensus 7 ~il~~~-~p~~GH~~P~l~La~~L~~~~Gh~Vt~~ 40 (427)
.|++.. -++.|-..-...||..|++ +|++|.++
T Consensus 3 ~I~v~s~kgGvGKTt~a~nLa~~la~-~G~rVll~ 36 (224)
T 1byi_A 3 RYFVTGTDTEVGKTVASCALLQAAKA-AGYRTAGY 36 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHH-TTCCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHH-CCCCEEEE
Confidence 345555 4789999999999999999 99999986
No 268
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=22.28 E-value=69 Score=30.22 Aligned_cols=38 Identities=8% Similarity=0.061 Sum_probs=26.0
Q ss_pred CC-CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 1 MG-SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 1 m~-~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
|+ +.+.+|+++.. |. -.+.+++++++ .|++|..+....
T Consensus 1 m~~~~~k~ILI~g~---g~--~~~~i~~a~~~-~G~~vv~v~~~~ 39 (461)
T 2dzd_A 1 METRRIRKVLVANR---GE--IAIRVFRACTE-LGIRTVAIYSKE 39 (461)
T ss_dssp --CCCCSEEEECSC---HH--HHHHHHHHHHH-HTCEEEEEECGG
T ss_pred CCCCcCcEEEEECC---cH--HHHHHHHHHHH-cCCEEEEEECCc
Confidence 76 33467887742 32 35789999999 999999887644
No 269
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=22.27 E-value=51 Score=28.99 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=27.0
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
+++|.|+-.+..|. .+|+.|++ +||+|++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~-~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTE-WPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTT-STTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHH-CCCeEEEEeC
Confidence 46899998888774 68999999 9999998864
No 270
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=22.27 E-value=1e+02 Score=22.40 Aligned_cols=37 Identities=11% Similarity=0.046 Sum_probs=29.3
Q ss_pred CCcEEEEeCCCCccCHHHHH-HHHHHHHhcCCCE-EEEEe
Q 035495 4 ENEHIGMLPLMAHGHLIPFL-ALAKQIHRSTGFK-ITIAN 41 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l-~La~~L~~~~Gh~-Vt~~~ 41 (427)
+++||+++|..+.|+-.-+. .|-+.+.+ +|.+ +.+-.
T Consensus 17 ~~~kIlvvC~sG~gTS~m~~~kl~~~~~~-~gi~~~~i~~ 55 (110)
T 3czc_A 17 SMVKVLTACGNGMGSSMVIKMKVENALRQ-LGVSDIESAS 55 (110)
T ss_dssp -CEEEEEECCCCHHHHHHHHHHHHHHHHH-TTCCCEEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHHHHHH-cCCCeEEEEE
Confidence 46789999999999888777 77788888 9987 65443
No 271
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=22.25 E-value=2.1e+02 Score=25.81 Aligned_cols=73 Identities=5% Similarity=-0.074 Sum_probs=40.8
Q ss_pred cCCCCEEEeCccCCCCCCCCCCCchhhhhhccCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 035495 243 YIKLPVWAIGPLLPQSYLKKSKNPEKIIEWLDLHDPASVLHISFGSQNTISSSQMMELDIGLEASAKSFLWVITPP 318 (427)
Q Consensus 243 ~~~~~~~~vGp~~~~~~~~~~~~~~~l~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 318 (427)
..|.++..++-+.+.. +..-.+++..+++..+-+++-+-+.-.....+...+..+.+++++.+..+.+..+..
T Consensus 124 ~~P~Rf~g~a~v~~~~---~~~a~~El~r~~~~~G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~pV~iH~g~~ 196 (357)
T 3nur_A 124 QYPNRFVGFATLPINE---PEAAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPAPV 196 (357)
T ss_dssp HSTTTEEECBCCCTTS---HHHHHHHHHHHHHTTCCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred hCCCEEEEEEeCCCCC---HHHHHHHHHHHHhhcCceEEEeCCCCCCCCCCCccHHHHHHHHHhcCCeEEEecCCC
Confidence 3456666665554321 001124555555444344544332111223456678889999999999988877654
No 272
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=21.88 E-value=1.4e+02 Score=21.15 Aligned_cols=31 Identities=16% Similarity=0.237 Sum_probs=20.8
Q ss_pred CCcEEEecCCcch--HHHHHHH----hCCceEEEecc
Q 035495 123 PPICIITDTFFGW--AVDVAKS----AGSTNVTFATG 153 (427)
Q Consensus 123 ~~D~vI~D~~~~~--~~~~A~~----lgiP~v~~~~~ 153 (427)
+||+||.|...+. +..+.+. .++|.+.+...
T Consensus 46 ~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~ 82 (120)
T 3f6p_A 46 QPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAK 82 (120)
T ss_dssp CCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECC
Confidence 4999999987653 4444443 36887777654
No 273
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=21.85 E-value=1.3e+02 Score=26.50 Aligned_cols=43 Identities=14% Similarity=0.116 Sum_probs=28.9
Q ss_pred CC-CCCcEEEEeCCCCccC--H-HHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 1 MG-SENEHIGMLPLMAHGH--L-IPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 1 m~-~~~~~il~~~~p~~GH--~-~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
|. ++++|++++..|..|. . .-.-.+...|.+ +|+++++..+..
T Consensus 3 m~~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~-~~~~~~~~~t~~ 49 (304)
T 3s40_A 3 MTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAA-AFPDLHILHTKE 49 (304)
T ss_dssp --CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHH-HCSEEEEEECCS
T ss_pred CccCCCCEEEEEECcccCCCchHHHHHHHHHHHHH-cCCeEEEEEccC
Confidence 53 4567888888775543 2 234577788888 999999887654
No 274
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=21.73 E-value=87 Score=27.75 Aligned_cols=37 Identities=3% Similarity=0.049 Sum_probs=28.8
Q ss_pred CcEEEEeCCCCccCHHH-HHHHHHHHHhcCCCEEEEEeC
Q 035495 5 NEHIGMLPLMAHGHLIP-FLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P-~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
+.+|+++..+..++... ...+.+.|.+ +|++|.+..+
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~-~g~~v~~~~~ 41 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGD-NKIALRVLSA 41 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHT-TTCEEEEEC-
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHH-CCCEEEEecc
Confidence 46899999998887644 6688889999 9999887643
No 275
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=21.72 E-value=98 Score=26.59 Aligned_cols=43 Identities=9% Similarity=0.067 Sum_probs=31.7
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcchHHhhh
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPLNIQYLQN 51 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~~~v~~ 51 (427)
||||+.-=-+. |---+..|+++|++ .| +|+++.+...+.-...
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~-~g-~V~VVAP~~~~Sg~g~ 44 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKS-LG-RVVVVAPDRNLSGVGH 44 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTT-TS-EEEEEEESSCCTTSCC
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHh-cC-CEEEEecCCCccCCcc
Confidence 68888764443 33447899999999 88 9999998877755444
No 276
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=21.72 E-value=81 Score=26.34 Aligned_cols=40 Identities=8% Similarity=0.060 Sum_probs=31.9
Q ss_pred CcEEE-EeC-CCCccCHHHHHHHHHHHHhcC-CCEEEEEeCCcc
Q 035495 5 NEHIG-MLP-LMAHGHLIPFLALAKQIHRST-GFKITIANTPLN 45 (427)
Q Consensus 5 ~~~il-~~~-~p~~GH~~P~l~La~~L~~~~-Gh~Vt~~~~~~~ 45 (427)
+++++ |+. -++.|-..-...||..|++ + |++|.++-....
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~-~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQ-EPDIHVLAVDISLP 45 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTT-STTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHh-CcCCCEEEEECCCC
Confidence 34554 443 5789999999999999999 9 999999986544
No 277
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=21.58 E-value=63 Score=29.21 Aligned_cols=35 Identities=17% Similarity=0.254 Sum_probs=24.5
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcC-CCEEEEEeCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRST-GFKITIANTP 43 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~-Gh~Vt~~~~~ 43 (427)
.+++|+++- +.|.+- ..|+++|.+ + ||+|+.++-.
T Consensus 23 ~~~~vlVtG--atG~iG--~~l~~~L~~-~~g~~V~~~~r~ 58 (372)
T 3slg_A 23 KAKKVLILG--VNGFIG--HHLSKRILE-TTDWEVFGMDMQ 58 (372)
T ss_dssp CCCEEEEES--CSSHHH--HHHHHHHHH-HSSCEEEEEESC
T ss_pred CCCEEEEEC--CCChHH--HHHHHHHHh-CCCCEEEEEeCC
Confidence 456777664 334333 478889998 8 9999999853
No 278
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=21.49 E-value=78 Score=27.96 Aligned_cols=32 Identities=25% Similarity=0.475 Sum_probs=25.8
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
+++|.|+-.+..|. .+|+.|.+ .||+|+++..
T Consensus 30 ~~~I~iIG~G~mG~-----~~a~~l~~-~g~~V~~~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMGS-----GIVSNLLK-MGHTVTVWNR 61 (316)
T ss_dssp SSCEEEECCSHHHH-----HHHHHHHH-TTCCEEEECS
T ss_pred CCeEEEEcccHHHH-----HHHHHHHh-CCCEEEEEeC
Confidence 47899998777764 57888999 9999988754
No 279
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=21.45 E-value=2e+02 Score=23.09 Aligned_cols=39 Identities=13% Similarity=0.196 Sum_probs=29.5
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
+++||+|+.+++..- .-+......|.+ .|++|++++...
T Consensus 22 ~~~kV~ill~~g~~~-~e~~~~~~~l~~-ag~~v~~vs~~~ 60 (193)
T 1oi4_A 22 LSKKIAVLITDEFED-SEFTSPADEFRK-AGHEVITIEKQA 60 (193)
T ss_dssp CCCEEEEECCTTBCT-HHHHHHHHHHHH-TTCEEEEEESST
T ss_pred cCCEEEEEECCCCCH-HHHHHHHHHHHH-CCCEEEEEECCC
Confidence 457899998876553 345567778899 999999998653
No 280
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=21.44 E-value=1.8e+02 Score=26.22 Aligned_cols=29 Identities=17% Similarity=0.149 Sum_probs=21.4
Q ss_pred ccCcceeecc-CChhhHHHHHhcCCcEEeccC
Q 035495 361 HKSTGAFLSH-CGWNSVLESLSQGLPTIGWPI 391 (427)
Q Consensus 361 ~~~v~~~I~H-gG~~s~~eal~~GvP~v~~P~ 391 (427)
.++ ++|++ .+..+...|-..|+|.+.+-.
T Consensus 114 ~PD--~Vv~~~~~~~~~~aa~~~giP~v~~~~ 143 (391)
T 3tsa_A 114 RPS--VLLVDVCALIGRVLGGLLDLPVVLHRW 143 (391)
T ss_dssp CCS--EEEEETTCHHHHHHHHHTTCCEEEECC
T ss_pred CCC--EEEeCcchhHHHHHHHHhCCCEEEEec
Confidence 577 45555 667677788899999998754
No 281
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=21.40 E-value=68 Score=32.23 Aligned_cols=43 Identities=14% Similarity=0.154 Sum_probs=30.9
Q ss_pred EEeccccch---------HhhhcccCcceeecc---CCh-hhHHHHHhcCCcEEeccC
Q 035495 347 LLVRNWAPQ---------LEILSHKSTGAFLSH---CGW-NSVLESLSQGLPTIGWPI 391 (427)
Q Consensus 347 v~~~~~vpq---------~~ll~~~~v~~~I~H---gG~-~s~~eal~~GvP~v~~P~ 391 (427)
+.+-.|++. .++++.++ +||.- =|+ .+.+||+++|+|+|+.-.
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~ad--vfV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCH--LGVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCS--EEECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred EEeccccCCCCccchhHHHHHHhhce--EEEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 444467765 45788899 56644 243 589999999999998654
No 282
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=21.37 E-value=97 Score=26.79 Aligned_cols=41 Identities=15% Similarity=0.124 Sum_probs=32.3
Q ss_pred CcEEEEeC--CCCccCHHHHHHHHHHHHhcCCCEEEEEeCCcch
Q 035495 5 NEHIGMLP--LMAHGHLIPFLALAKQIHRSTGFKITIANTPLNI 46 (427)
Q Consensus 5 ~~~il~~~--~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~~~ 46 (427)
++++++++ -++.|-..-...||..|++ .|.+|.++-.....
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~-~G~rVLLID~D~~~ 123 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQ-AGYKTLIVDGDMRK 123 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCSSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHh-CCCeEEEEeCCCCC
Confidence 34555444 4789999999999999999 99999999765443
No 283
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=21.35 E-value=64 Score=30.94 Aligned_cols=34 Identities=15% Similarity=0.052 Sum_probs=26.1
Q ss_pred HHHHHHHhhhhhcCCCCcEEEecCCcchHHHHHHHhCCceEEE
Q 035495 108 PLYNLLMDIKEKAGKPPICIITDTFFGWAVDVAKSAGSTNVTF 150 (427)
Q Consensus 108 ~~~~~l~~~~~~~~~~~D~vI~D~~~~~~~~~A~~lgiP~v~~ 150 (427)
.+++++++.+ ||++|... ....+|+++|||++.+
T Consensus 408 el~~~i~~~~------pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 408 EFEEFVKRIK------PDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHHC------CSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHhcC------CcEEEeCc---chhHHHHHcCCCEEec
Confidence 3455566555 99999974 4678999999999964
No 284
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=21.26 E-value=76 Score=28.20 Aligned_cols=31 Identities=26% Similarity=0.265 Sum_probs=24.9
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
|||.|+-.+..|. .+|..|++ +||+|+++..
T Consensus 1 m~I~iiG~G~mG~-----~~a~~L~~-~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGS-----ALSVPLVD-NGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHH-HCCEEEEECC
T ss_pred CEEEEECcCHHHH-----HHHHHHHh-CCCeEEEEEc
Confidence 3788887776663 56899999 9999999875
No 285
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=21.18 E-value=83 Score=27.38 Aligned_cols=33 Identities=15% Similarity=0.031 Sum_probs=23.4
Q ss_pred CcEEEEeC-CCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 5 NEHIGMLP-LMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 5 ~~~il~~~-~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
+++|+++- .+..| ..++++|.+ +||+|+.++-.
T Consensus 4 ~~~ilVtGatG~iG-----~~l~~~L~~-~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLIGATGYIG-----RHVAKASLD-LGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEESTTSTTH-----HHHHHHHHH-TTCCEEEECCC
T ss_pred CCEEEEEcCCcHHH-----HHHHHHHHh-CCCCEEEEECC
Confidence 45676664 24444 467899999 99999988743
No 286
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=21.04 E-value=1.2e+02 Score=22.06 Aligned_cols=38 Identities=11% Similarity=-0.029 Sum_probs=27.2
Q ss_pred CCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 035495 3 SENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 3 ~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
.+++||+++|..+.|--.-.-.+-++..+ +|.+|.+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~-~gi~v~i~a 41 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANL-TEVRVIANS 41 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHH-HTCSEEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHH-CCCceEEEE
Confidence 46789999998876555555566666666 898888854
No 287
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=21.03 E-value=71 Score=27.81 Aligned_cols=32 Identities=31% Similarity=0.489 Sum_probs=26.1
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
++|.|+-.+..|. .+|+.|++ +||+|++....
T Consensus 2 ~~I~iiG~G~mG~-----~~a~~l~~-~G~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGG-----PMAANLVR-AGFDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHH-HTCCEEEECSS
T ss_pred CeEEEEccCHHHH-----HHHHHHHH-CCCeEEEEcCC
Confidence 4799998887774 57899999 99999988643
No 288
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=20.93 E-value=2.3e+02 Score=25.24 Aligned_cols=78 Identities=12% Similarity=-0.057 Sum_probs=0.0
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhc
Q 035495 281 VLHISFGSQNTISSSQMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILS 360 (427)
Q Consensus 281 vV~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~ 360 (427)
.|+++--+-.. +.++.+.+.+++.+..+.+..... +.. ..-+-...+..
T Consensus 33 ~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~-------------------------~~~---~~~~~~~~~~~ 81 (332)
T 2bon_A 33 LLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWE-------------------------KGD---AARYVEEARKF 81 (332)
T ss_dssp EEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCS-------------------------TTH---HHHHHHHHHHH
T ss_pred EEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecC-------------------------cch---HHHHHHHHHhc
Q ss_pred ccCcceeeccCChhhHHHHH--------hcCCcEEeccC
Q 035495 361 HKSTGAFLSHCGWNSVLESL--------SQGLPTIGWPI 391 (427)
Q Consensus 361 ~~~v~~~I~HgG~~s~~eal--------~~GvP~v~~P~ 391 (427)
.++ ++|.-||-||+.|++ ..++|+.++|.
T Consensus 82 ~~d--~vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 82 GVA--TVIAGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp TCS--EEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred CCC--EEEEEccchHHHHHHHHHhhcccCCCCeEEEecC
No 289
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=20.90 E-value=65 Score=29.24 Aligned_cols=37 Identities=19% Similarity=0.139 Sum_probs=26.1
Q ss_pred CCcEEEEeCCCCc-cC---HHHHHHHHHHHHhcCCCEEEEEe
Q 035495 4 ENEHIGMLPLMAH-GH---LIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 4 ~~~~il~~~~p~~-GH---~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
+|+||+++..+.. =| +.....++++|.+ .||+|..+.
T Consensus 2 ~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~-~gy~v~~i~ 42 (357)
T 4fu0_A 2 QNKKIAVIFGGNSTEYEVSLQSASAVFENINT-NKFDIIPIG 42 (357)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCT-TTEEEEEEE
T ss_pred CCCEEEEEECCCccchHHHHHHHHHHHHHHhH-hCCEEEEEE
Confidence 4568888754432 24 3445578899999 999999885
No 290
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=20.86 E-value=2e+02 Score=24.09 Aligned_cols=39 Identities=15% Similarity=0.190 Sum_probs=24.6
Q ss_pred CCCCCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCE-EEEEeCCc
Q 035495 1 MGSENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFK-ITIANTPL 44 (427)
Q Consensus 1 m~~~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~-Vt~~~~~~ 44 (427)
|..+.++++++ .. .|- --.++|++|++ +|++ |.++.-..
T Consensus 1 m~l~~k~vlVt-Ga-s~g--IG~~~a~~l~~-~G~~~v~~~~r~~ 40 (254)
T 1sby_A 1 MDLTNKNVIFV-AA-LGG--IGLDTSRELVK-RNLKNFVILDRVE 40 (254)
T ss_dssp CCCTTCEEEEE-TT-TSH--HHHHHHHHHHH-TCCSEEEEEESSC
T ss_pred CCCCCcEEEEE-CC-CCh--HHHHHHHHHHH-CCCcEEEEEecCc
Confidence 54444455554 33 332 34689999999 9997 77776443
No 291
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=20.83 E-value=61 Score=29.40 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=27.6
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
++.+|+++-.+..| +.+|.+|++ +|++|+++-..
T Consensus 4 ~~~dVvIIGgGi~G-----l~~A~~La~-~G~~V~lle~~ 37 (382)
T 1y56_B 4 EKSEIVVIGGGIVG-----VTIAHELAK-RGEEVTVIEKR 37 (382)
T ss_dssp SBCSEEEECCSHHH-----HHHHHHHHH-TTCCEEEECSS
T ss_pred CcCCEEEECCCHHH-----HHHHHHHHH-CCCeEEEEeCC
Confidence 34679998877666 788999999 99999998643
No 292
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=20.82 E-value=76 Score=27.09 Aligned_cols=30 Identities=13% Similarity=0.319 Sum_probs=23.6
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEe
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIAN 41 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~ 41 (427)
|+|.|+-.+..|. .+|+.|++ .||+|++..
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~-~g~~V~~~~ 30 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRS-RGVEVVTSL 30 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHH-TTCEEEECC
T ss_pred CeEEEEechHHHH-----HHHHHHHH-CCCeEEEeC
Confidence 3788887766664 57999999 999999853
No 293
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=20.79 E-value=1.2e+02 Score=27.07 Aligned_cols=35 Identities=6% Similarity=0.103 Sum_probs=26.5
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
.||||+|+-.|..+ .+.-++|.+ .||+|..+.+..
T Consensus 3 ~mmrIvf~Gtp~fa-----~~~L~~L~~-~~~~v~~Vvt~p 37 (317)
T 3rfo_A 3 AMIKVVFMGTPDFS-----VPVLRRLIE-DGYDVIGVVTQP 37 (317)
T ss_dssp TTSEEEEECCSTTH-----HHHHHHHHH-TTCEEEEEECCC
T ss_pred CceEEEEEeCCHHH-----HHHHHHHHH-CCCcEEEEEeCC
Confidence 56899999888654 344577888 899998877643
No 294
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=20.76 E-value=96 Score=26.17 Aligned_cols=37 Identities=16% Similarity=0.183 Sum_probs=30.4
Q ss_pred EEEEe-C-CCCccCHHHHHHHHHHHHhcCCCEEEEEeCCc
Q 035495 7 HIGML-P-LMAHGHLIPFLALAKQIHRSTGFKITIANTPL 44 (427)
Q Consensus 7 ~il~~-~-~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~~ 44 (427)
+++.+ . -++.|-..-...||..|++ +|++|.++-...
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~-~g~~VlliD~D~ 41 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQ-KGKKTVVIDFAI 41 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHh-CCCcEEEEECCC
Confidence 44444 3 6688999999999999999 999999997654
No 295
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=20.74 E-value=74 Score=26.09 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=22.5
Q ss_pred EEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 7 HIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 7 ~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
+|+++- +.|-+- ..++++|.+ +||+|+.++-.
T Consensus 2 ~ilItG--atG~iG--~~l~~~L~~-~g~~V~~~~R~ 33 (219)
T 3dqp_A 2 KIFIVG--STGRVG--KSLLKSLST-TDYQIYAGARK 33 (219)
T ss_dssp EEEEES--TTSHHH--HHHHHHHTT-SSCEEEEEESS
T ss_pred eEEEEC--CCCHHH--HHHHHHHHH-CCCEEEEEECC
Confidence 666553 333322 588999999 99999998743
No 296
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=20.74 E-value=61 Score=28.97 Aligned_cols=34 Identities=6% Similarity=-0.010 Sum_probs=24.4
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
++++|+++- +.|.+- ..|+++|.+ +||+|+.+.-
T Consensus 24 ~~~~vlVtG--atG~iG--~~l~~~L~~-~g~~V~~~~r 57 (351)
T 3ruf_A 24 SPKTWLITG--VAGFIG--SNLLEKLLK-LNQVVIGLDN 57 (351)
T ss_dssp SCCEEEEET--TTSHHH--HHHHHHHHH-TTCEEEEEEC
T ss_pred CCCeEEEEC--CCcHHH--HHHHHHHHH-CCCEEEEEeC
Confidence 346777654 334432 578999999 9999999975
No 297
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=20.70 E-value=1e+02 Score=27.14 Aligned_cols=39 Identities=8% Similarity=0.004 Sum_probs=29.9
Q ss_pred CCcEEEEeCCCCcc-C---HHHHHHHHHHHHhcCCCEEEEEeCC
Q 035495 4 ENEHIGMLPLMAHG-H---LIPFLALAKQIHRSTGFKITIANTP 43 (427)
Q Consensus 4 ~~~~il~~~~p~~G-H---~~P~l~La~~L~~~~Gh~Vt~~~~~ 43 (427)
.++||+++..+..+ | +.....++++|.+ .||+|..+...
T Consensus 12 ~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~-~g~~v~~i~~~ 54 (317)
T 4eg0_A 12 RFGKVAVLFGGESAEREVSLTSGRLVLQGLRD-AGIDAHPFDPA 54 (317)
T ss_dssp GGCEEEEECCCSSTTHHHHHHHHHHHHHHHHH-TTCEEEEECTT
T ss_pred hcceEEEEECCCCCcceeeHHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 35789988875333 2 4567899999999 99999999853
No 298
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=20.69 E-value=1.3e+02 Score=24.54 Aligned_cols=36 Identities=11% Similarity=0.110 Sum_probs=28.0
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
..++++..+..|+-.-+..+++.|++ +|+.|...-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~-~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQ-EGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHH-TTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHH-CCcEEEEecc
Confidence 34666666677777888999999999 9998877653
No 299
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=20.63 E-value=1.6e+02 Score=23.25 Aligned_cols=35 Identities=6% Similarity=0.031 Sum_probs=22.5
Q ss_pred HhhhcccCcceee-c-----cCChhhHHHH---HhcCCcEEecc
Q 035495 356 LEILSHKSTGAFL-S-----HCGWNSVLES---LSQGLPTIGWP 390 (427)
Q Consensus 356 ~~ll~~~~v~~~I-~-----HgG~~s~~ea---l~~GvP~v~~P 390 (427)
...+..|++-+.+ + .--.||..|. .+.|+|++++-
T Consensus 62 ~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 62 IQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp HHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 3445566643333 2 2347888885 78999999974
No 300
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=20.55 E-value=1.5e+02 Score=25.50 Aligned_cols=30 Identities=13% Similarity=-0.166 Sum_probs=24.0
Q ss_pred CcEEEecCCcc------hHHHHHHHhCCceEEEecc
Q 035495 124 PICIITDTFFG------WAVDVAKSAGSTNVTFATG 153 (427)
Q Consensus 124 ~D~vI~D~~~~------~~~~~A~~lgiP~v~~~~~ 153 (427)
||+|++-.... .+..+|++||+|.++....
T Consensus 117 ~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 117 VDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp CSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred CCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 99999775432 5789999999999997643
No 301
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=20.54 E-value=80 Score=27.81 Aligned_cols=32 Identities=13% Similarity=0.212 Sum_probs=22.2
Q ss_pred cEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 6 EHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 6 ~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
++|+++- +.|-+ -..|+++|.+ +||+|+.+.-
T Consensus 2 ~~ilVtG--atG~i--G~~l~~~L~~-~g~~V~~~~r 33 (330)
T 2c20_A 2 NSILICG--GAGYI--GSHAVKKLVD-EGLSVVVVDN 33 (330)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHH-TTCEEEEEEC
T ss_pred CEEEEEC--CCcHH--HHHHHHHHHh-CCCEEEEEeC
Confidence 4666653 22322 2578999999 9999999864
No 302
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=20.50 E-value=70 Score=28.72 Aligned_cols=38 Identities=8% Similarity=0.098 Sum_probs=27.2
Q ss_pred CCcEEEEeCCCCccC----HHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHGH----LIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~GH----~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
+|+||+++..+..+- +.....++++|.+ .||+|..+..
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~-~g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINK-EKYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCT-TTEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhh-cCCEEEEEEE
Confidence 367888887543222 2256678999999 9999999864
No 303
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=20.48 E-value=59 Score=28.78 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=26.6
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
.+++|.|+-.+..|. .+|+.|++ +||+|++...
T Consensus 8 ~~~~IgiIG~G~mG~-----~~A~~l~~-~G~~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGT-----IMAQVLLK-QGKRVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHHH-----HHHHHHHH-TTCCEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHH-CCCEEEEEeC
Confidence 357899997776664 68999999 9999998753
No 304
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=20.42 E-value=1.4e+02 Score=24.18 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=26.1
Q ss_pred EEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 8 IGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 8 il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
|+|+..+...+-.....+++.+++ .|++|.+++.
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~-~gi~v~~Ig~ 143 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKK-NNVAIDIIHI 143 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHH-TTEEEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHH-CCCEEEEEEe
Confidence 455555555667778899999999 9999998873
No 305
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=20.36 E-value=80 Score=30.72 Aligned_cols=27 Identities=19% Similarity=0.107 Sum_probs=22.5
Q ss_pred cceeeccCChh------hHHHHHhcCCcEEecc
Q 035495 364 TGAFLSHCGWN------SVLESLSQGLPTIGWP 390 (427)
Q Consensus 364 v~~~I~HgG~~------s~~eal~~GvP~v~~P 390 (427)
.+++++|.|-| .+.||-+.++|+|++-
T Consensus 72 pgv~~~TsGpG~~N~~~gia~A~~d~vPll~it 104 (556)
T 3hww_A 72 PVAVIVTSGTAVANLYPALIEAGLTGEKLILLT 104 (556)
T ss_dssp CEEEEECSSHHHHTTHHHHHHHHHHCCCEEEEE
T ss_pred CEEEEECCCcHHHhhhHHHHHHHHhCCCeEEEe
Confidence 44788888855 8999999999999973
No 306
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=20.25 E-value=37 Score=30.14 Aligned_cols=32 Identities=13% Similarity=0.032 Sum_probs=26.0
Q ss_pred CcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 5 NEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 5 ~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
+.+|+++-.+..| +.+|..|++ +||+|+++-.
T Consensus 8 ~~~vvIIG~G~aG-----l~~A~~l~~-~g~~v~lie~ 39 (333)
T 1vdc_A 8 NTRLCIVGSGPAA-----HTAAIYAAR-AELKPLLFEG 39 (333)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHH-TTCCCEEECC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHH-CCCeEEEEec
Confidence 4578888877655 778999999 9999999864
No 307
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=20.23 E-value=2.9e+02 Score=22.95 Aligned_cols=80 Identities=11% Similarity=0.105 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCCcEEEEEcCCCCCCcchhhhccCCchhHHHHhccCCCcEEeccccchHhhhcccCcceeeccCChhh
Q 035495 296 QMMELDIGLEASAKSFLWVITPPVGFDLRAEFRSEWLPEGFEERIKEIKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNS 375 (427)
Q Consensus 296 ~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~vpq~~ll~~~~v~~~I~HgG~~s 375 (427)
.+.+..++....+-++|=++.... .+.......- .....+..+---..++..-+-..++--||.||
T Consensus 57 iM~aa~~gAl~~GG~tiGVlP~~~------------~~~e~~~~~~--~~~~~~~~f~~Rk~~~~~~sda~VvlpGG~GT 122 (215)
T 2a33_A 57 LMGLVSQAVHDGGRHVIGIIPKTL------------MPRELTGETV--GEVRAVADMHQRKAEMAKHSDAFIALPGGYGT 122 (215)
T ss_dssp HHHHHHHHHHHTTCCEEEEEESSC------------C--------C--CEEEEESSHHHHHHHHHHTCSEEEECSCCHHH
T ss_pred HhHHHHHHHHHcCCcEEEEcchHh------------cchhhccCCC--CceeecCCHHHHHHHHHHhCCEEEEeCCCCch
Q ss_pred HHHHHhc---------CCcEEec
Q 035495 376 VLESLSQ---------GLPTIGW 389 (427)
Q Consensus 376 ~~eal~~---------GvP~v~~ 389 (427)
+-|.... ++|++.+
T Consensus 123 LdElfE~lt~~qlg~~~kPvvll 145 (215)
T 2a33_A 123 LEELLEVITWAQLGIHDKPVGLL 145 (215)
T ss_dssp HHHHHHHHHHHHTTSCCCCEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCeEEe
No 308
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=20.19 E-value=88 Score=25.53 Aligned_cols=31 Identities=19% Similarity=0.299 Sum_probs=23.1
Q ss_pred cEEEEeC-CCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 6 EHIGMLP-LMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 6 ~~il~~~-~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
|+|+++- .+..| ..+++.|.+ +||+|+++..
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~-~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLAT-LGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHT-TTCEEEEEES
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHH-CCCEEEEEeC
Confidence 3688775 54444 367899999 9999998864
No 309
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=20.16 E-value=84 Score=28.78 Aligned_cols=33 Identities=15% Similarity=0.413 Sum_probs=26.7
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
++.+|+++-.+-.| +.+|..|++ +|++|+++=-
T Consensus 25 ~~~dV~IVGaG~aG-----l~~A~~L~~-~G~~v~v~E~ 57 (398)
T 2xdo_A 25 SDKNVAIIGGGPVG-----LTMAKLLQQ-NGIDVSVYER 57 (398)
T ss_dssp TTCEEEEECCSHHH-----HHHHHHHHT-TTCEEEEEEC
T ss_pred CCCCEEEECCCHHH-----HHHHHHHHH-CCCCEEEEeC
Confidence 34689988877665 778999999 9999999853
No 310
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=20.02 E-value=94 Score=26.31 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=26.0
Q ss_pred CCcEEEEeCCCCccCHHHHHHHHHHHHhcCCCEEEEEeC
Q 035495 4 ENEHIGMLPLMAHGHLIPFLALAKQIHRSTGFKITIANT 42 (427)
Q Consensus 4 ~~~~il~~~~p~~GH~~P~l~La~~L~~~~Gh~Vt~~~~ 42 (427)
.+++|.|+-.+..| ..||+.|++ .||+|++...
T Consensus 18 ~~~kIgiIG~G~mG-----~alA~~L~~-~G~~V~~~~r 50 (245)
T 3dtt_A 18 QGMKIAVLGTGTVG-----RTMAGALAD-LGHEVTIGTR 50 (245)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEES
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHH-CCCEEEEEeC
Confidence 45789999776666 457999999 9999998864
No 311
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=20.01 E-value=1.1e+02 Score=27.82 Aligned_cols=39 Identities=10% Similarity=0.014 Sum_probs=33.7
Q ss_pred cEEEEeC-CCCccCHHHHHHHHHHHH--hcCCCEEEEEeCCcc
Q 035495 6 EHIGMLP-LMAHGHLIPFLALAKQIH--RSTGFKITIANTPLN 45 (427)
Q Consensus 6 ~~il~~~-~p~~GH~~P~l~La~~L~--~~~Gh~Vt~~~~~~~ 45 (427)
.+|+|++ -++.|-..-...||..|+ + +|++|.++.....
T Consensus 18 ~~i~v~sgKGGvGKTTvaanLA~~lA~~~-~G~rVLLvD~D~~ 59 (354)
T 2woj_A 18 HKWIFVGGKGGVGKTTSSCSIAIQMALSQ-PNKQFLLISTDPA 59 (354)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHHHHHC-TTSCEEEEECCSS
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHhc-CCCeEEEEECCCC
Confidence 4566665 789999999999999999 9 9999999998763
Done!