Query 035497
Match_columns 127
No_of_seqs 147 out of 1061
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 03:25:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035497.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035497hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03157 spermidine hydroxycin 100.0 4.4E-31 9.5E-36 219.3 13.4 104 21-125 51-195 (447)
2 PLN02663 hydroxycinnamoyl-CoA: 100.0 1.8E-29 3.8E-34 208.5 13.7 103 23-126 52-195 (431)
3 PLN02481 Omega-hydroxypalmitat 100.0 1.3E-29 2.8E-34 210.1 12.8 106 20-126 60-208 (436)
4 PF02458 Transferase: Transfer 100.0 4.7E-30 1E-34 209.7 4.6 102 23-125 54-197 (432)
5 PLN00140 alcohol acetyltransfe 100.0 6.6E-28 1.4E-32 200.6 11.4 93 21-117 55-190 (444)
6 PF00668 Condensation: Condens 97.4 0.00097 2.1E-08 50.5 7.6 85 22-106 39-160 (301)
7 PRK09294 acyltransferase PapA5 97.3 0.0017 3.7E-08 53.3 8.6 83 21-103 33-139 (416)
8 PF03007 WES_acyltransf: Wax e 96.3 0.033 7.2E-07 43.6 8.5 81 23-103 37-157 (263)
9 PF07247 AATase: Alcohol acety 94.4 0.27 5.9E-06 41.1 8.2 81 24-104 33-170 (480)
10 TIGR02946 acyl_WS_DGAT acyltra 93.7 0.17 3.8E-06 41.7 5.7 82 22-103 30-151 (446)
11 PRK10252 entF enterobactin syn 93.0 0.46 9.9E-06 44.1 7.9 83 21-103 41-161 (1296)
12 COG4908 Uncharacterized protei 92.7 0.24 5.3E-06 41.9 5.1 83 23-105 38-156 (439)
13 PRK12467 peptide synthase; Pro 92.7 0.85 1.8E-05 47.7 9.8 84 23-106 2681-2802(3956)
14 PRK12316 peptide synthase; Pro 91.6 1.4 3.1E-05 47.1 10.0 84 23-106 1591-1712(5163)
15 PRK12316 peptide synthase; Pro 91.2 1.5 3.3E-05 46.9 9.9 84 23-106 4137-4258(5163)
16 TIGR01347 sucB 2-oxoglutarate 90.6 2.4 5.3E-05 35.6 9.0 28 76-103 367-394 (403)
17 PF00198 2-oxoacid_dh: 2-oxoac 90.1 3.8 8.2E-05 31.7 9.1 29 75-103 196-224 (231)
18 PRK12467 peptide synthase; Pro 89.8 1.9 4.1E-05 45.3 9.0 83 21-103 83-203 (3956)
19 PRK05704 dihydrolipoamide succ 87.8 4.2 9E-05 34.2 8.4 28 77-104 372-399 (407)
20 TIGR01349 PDHac_trf_mito pyruv 87.8 3.8 8.3E-05 34.7 8.2 29 76-104 401-429 (435)
21 PRK05691 peptide synthase; Val 87.5 2.8 6.1E-05 44.3 8.5 83 22-104 710-830 (4334)
22 PRK11856 branched-chain alpha- 87.2 6.2 0.00013 32.8 9.1 29 75-103 375-403 (411)
23 TIGR01348 PDHac_trf_long pyruv 87.0 4.1 9E-05 35.5 8.2 28 76-103 512-539 (546)
24 PLN02226 2-oxoglutarate dehydr 86.8 4.5 9.7E-05 34.8 8.2 29 75-103 426-454 (463)
25 PRK05691 peptide synthase; Val 86.8 3.6 7.7E-05 43.6 8.8 82 22-103 1763-1882(4334)
26 PRK11857 dihydrolipoamide acet 85.9 3.2 6.8E-05 33.7 6.5 29 76-104 271-299 (306)
27 PRK11855 dihydrolipoamide acet 85.9 3.8 8.2E-05 35.6 7.4 29 75-103 512-540 (547)
28 PLN02528 2-oxoisovalerate dehy 85.1 6.4 0.00014 33.2 8.2 29 76-104 379-407 (416)
29 PRK11854 aceF pyruvate dehydro 84.9 5.8 0.00013 35.2 8.2 28 76-103 599-626 (633)
30 PRK14843 dihydrolipoamide acet 84.7 5.6 0.00012 32.8 7.5 29 76-104 313-341 (347)
31 TIGR02927 SucB_Actino 2-oxoglu 82.0 9.4 0.0002 33.6 8.3 28 77-104 554-581 (590)
32 PTZ00144 dihydrolipoamide succ 80.6 13 0.00029 31.5 8.4 29 75-103 381-409 (418)
33 PRK13757 chloramphenicol acety 80.5 2.2 4.8E-05 33.0 3.5 28 75-102 185-212 (219)
34 PF00302 CAT: Chloramphenicol 73.6 3.7 8.1E-05 31.4 3.0 24 75-98 182-205 (206)
35 PLN02744 dihydrolipoyllysine-r 71.5 29 0.00064 30.4 8.3 28 76-103 505-532 (539)
36 PRK12270 kgd alpha-ketoglutara 64.7 44 0.00095 32.0 8.3 31 76-106 322-352 (1228)
37 KOG0558 Dihydrolipoamide trans 60.9 30 0.00064 29.3 6.0 39 66-104 420-465 (474)
38 COG4845 Chloramphenicol O-acet 45.6 29 0.00063 27.0 3.4 29 75-103 184-212 (219)
39 PF00755 Carn_acyltransf: Chol 26.6 1.2E+02 0.0026 26.5 4.6 32 66-99 295-326 (591)
40 PF12993 DUF3877: Domain of un 23.8 21 0.00045 26.9 -0.5 57 9-65 29-87 (175)
No 1
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=99.97 E-value=4.4e-31 Score=219.27 Aligned_cols=104 Identities=30% Similarity=0.662 Sum_probs=97.7
Q ss_pred CChHHHHHHHHHHhhhhhcCCcceEeeCCCCceEEEecCCCeeEE-----------------------------------
Q 035497 21 KDPVKVIKEAISEALVYYYPFAGRIKQGPNRKVMVDCNGEGILFL----------------------------------- 65 (127)
Q Consensus 21 ~~~~~~Lk~sLs~~L~~f~~lAGrL~~~~~g~~~i~~~~~gv~fv----------------------------------- 65 (127)
.+++++||+||++||++||||||||+.+++|+++|+||++||.|+
T Consensus 51 ~~~~~~Lk~sLs~~L~~fyplAGRl~~~~~g~~~i~c~~~Gv~fveA~~~~~l~~~~~~~~~~~~~~l~P~~~~~~~~~~ 130 (447)
T PLN03157 51 GSIIEILKDSLSRALVPFYPLAGRLRWIGGGRLELECNAMGVLLIEAESEAKLDDFGDFSPTPEFEYLIPSVDYTKPIHE 130 (447)
T ss_pred ccHHHHHHHHHHHHHhhccccCEEEEEcCCCcEEEEECCCCeEEEEEEeCCcHHHhhccCCCHHHHhhcCCCCccccccc
Confidence 467899999999999999999999999999999999999999998
Q ss_pred ------EEEEecCCcEEeeeeeccccCChhhHHHHHHHHHHHhcCCCCCCCCCCCCCcccCCCCCC
Q 035497 66 ------KVTRLMCGGFTLAIHFNHTMCDELGLVQFVKTIQEMARGSNTPSLFPVSQRERLCARNPP 125 (127)
Q Consensus 66 ------Qvt~f~~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg~~~~~~~P~~dr~~l~~r~~p 125 (127)
|||+|.|||++||+++||.++||.|+.+||++||++|||... ..+|++||+++.++++|
T Consensus 131 ~Pll~vQvT~F~cGG~~lg~~~~H~v~Dg~~~~~fl~aWA~~~rg~~~-~~~P~~dR~~l~~~~~p 195 (447)
T PLN03157 131 LPLLLVQLTKFSCGGISLGLGISHAVADGQSALHFISEWARIARGEPL-GTVPFLDRKVLRAGEPP 195 (447)
T ss_pred CceEEEEEEEecCCCEEEEEEeeccccchHhHHHHHHHHHHHhcCCCC-CCCCccCcccccCCCCC
Confidence 999999999999999999999999999999999999999754 55799999999888877
No 2
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=99.96 E-value=1.8e-29 Score=208.50 Aligned_cols=103 Identities=41% Similarity=0.802 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHhhhhhcCCcceEeeCCCCceEEEecCCCeeEE-------------------------------------
Q 035497 23 PVKVIKEAISEALVYYYPFAGRIKQGPNRKVMVDCNGEGILFL------------------------------------- 65 (127)
Q Consensus 23 ~~~~Lk~sLs~~L~~f~~lAGrL~~~~~g~~~i~~~~~gv~fv------------------------------------- 65 (127)
..++||+||+++|++||||||||+.+++|+++|+||++||.|+
T Consensus 52 ~~~~Lk~sLs~~L~~~yplaGRl~~~~~g~~~i~c~~~Gv~fv~A~~~~~l~~~~~~~~~~~~~~l~P~~~~~~~~~~~P 131 (431)
T PLN02663 52 DPQVMKEALSKALVPFYPMAGRLRRDEDGRIEIDCNAEGVLFVEADTPSVIDDFGDFAPTLELRQLIPTVDYSGGISSYP 131 (431)
T ss_pred CHHHHHHHHHHHHhhccccceeeeECCCCCEEEEECCCCceEEEEecCCCHHHhhccCCCHHHHhhcCCCCCccccccCc
Confidence 3589999999999999999999999999999999999999998
Q ss_pred ----EEEEecCCcEEeeeeeccccCChhhHHHHHHHHHHHhcCCCCCCCCCCCCCcccCCCCCCC
Q 035497 66 ----KVTRLMCGGFTLAIHFNHTMCDELGLVQFVKTIQEMARGSNTPSLFPVSQRERLCARNPPQ 126 (127)
Q Consensus 66 ----Qvt~f~~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg~~~~~~~P~~dr~~l~~r~~p~ 126 (127)
|||+|.|||++||+++||.++||.|+.+||++||++|||... ..+|++||++++++.||.
T Consensus 132 ~l~vQvt~F~cGG~~lg~~~~H~v~Dg~g~~~fl~awa~~~rg~~~-~~~p~~dr~~l~~~~p~~ 195 (431)
T PLN02663 132 LLVLQVTHFKCGGVSLGVGMQHHAADGFSGLHFINTWSDMARGLDL-TIPPFIDRTLLRARDPPQ 195 (431)
T ss_pred eEEEEEEEeccCCEEEEEEecccccchHHHHHHHHHHHHHhcCCCC-CCCCccCccccCCCCCCC
Confidence 999999999999999999999999999999999999999753 567999999998887764
No 3
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=99.96 E-value=1.3e-29 Score=210.06 Aligned_cols=106 Identities=49% Similarity=0.892 Sum_probs=98.7
Q ss_pred CCChHHHHHHHHHHhhhhhcCCcceEeeCCCCceEEEecCCCeeEE----------------------------------
Q 035497 20 EKDPVKVIKEAISEALVYYYPFAGRIKQGPNRKVMVDCNGEGILFL---------------------------------- 65 (127)
Q Consensus 20 ~~~~~~~Lk~sLs~~L~~f~~lAGrL~~~~~g~~~i~~~~~gv~fv---------------------------------- 65 (127)
.+++++.||+||+++|++||||||||+.+++|+++|+||++||.|+
T Consensus 60 ~~~~~~~Lk~sLs~~L~~~~plAGRL~~~~~g~~~i~c~~~Gv~fvea~~d~~l~~l~~~~~p~~~~~~~l~~~~~~~~~ 139 (436)
T PLN02481 60 NEDPVDVIKKALSKVLVHYYPLAGRLTISSEGKLIVDCTGEGVVFVEAEANCSIEEIGDITKPDPETLGKLVYDVPGAKN 139 (436)
T ss_pred ccCHHHHHHHHHHHHhccccCCCCeeeeCCCCcEEEEEcCCCeEEEEEEecCcHHHhccccCCCCHHHHHhCCCCCCccc
Confidence 4568999999999999999999999999999999999999999998
Q ss_pred ---------EEEEecCCcEEeeeeeccccCChhhHHHHHHHHHHHhcCCCCCCCCCCCCCcccCCCCCCC
Q 035497 66 ---------KVTRLMCGGFTLAIHFNHTMCDELGLVQFVKTIQEMARGSNTPSLFPVSQRERLCARNPPQ 126 (127)
Q Consensus 66 ---------Qvt~f~~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg~~~~~~~P~~dr~~l~~r~~p~ 126 (127)
|||+|+|||++||+++||.++||.|+.+||++||++|||... ..+|++||+++.+++||.
T Consensus 140 ~~~~Pll~vQvT~F~~GG~~lg~~~~H~v~Dg~g~~~fl~~WA~~~rg~~~-~~~p~~dr~~l~~~~pp~ 208 (436)
T PLN02481 140 ILEIPPLTAQVTRFKCGGFVLGLCMNHCMFDGIGAMEFVNSWGETARGLPL-SVPPFLDRSILRARNPPK 208 (436)
T ss_pred ccccceeeeccceEecCcEEEEEEeccccccHHHHHHHHHHHHHHhcCCCC-CCCCCcCcccCCCCCCCC
Confidence 999999999999999999999999999999999999999763 568999999998887763
No 4
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=99.96 E-value=4.7e-30 Score=209.70 Aligned_cols=102 Identities=43% Similarity=0.854 Sum_probs=91.2
Q ss_pred hHHHHHHHHHHhhhhhcCCcceEeeCCCCceEEEecCCCeeEE-------------------------------------
Q 035497 23 PVKVIKEAISEALVYYYPFAGRIKQGPNRKVMVDCNGEGILFL------------------------------------- 65 (127)
Q Consensus 23 ~~~~Lk~sLs~~L~~f~~lAGrL~~~~~g~~~i~~~~~gv~fv------------------------------------- 65 (127)
+++.||+||+++|++|||||||| ++++|+++|+|||+||.|+
T Consensus 54 ~~~~Lk~sLs~~L~~~~~lAGrl-~~~~~~~~i~c~d~Gv~f~~a~~~~~l~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 132 (432)
T PF02458_consen 54 IVDNLKESLSKTLVHYYPLAGRL-RDPDGRLEIDCNDDGVEFVEAEADGTLDDLLDLEPPSEFLRDLVPQLPVSSEGEDA 132 (432)
T ss_dssp HHHHHHHHHHHHHTTSGGGGSEE-ESSCTTTEEEECTTTEEEEEEEESS-HHHHCSSSCCGGGGGGGSSS-SSSEEETTE
T ss_pred HHHHHHHHHHHhHhhCcccCcEE-cccccceEEEEecCCCEEEEEecccceeeccccccchHHHHHHhhhcccCCccccc
Confidence 58999999999999999999999 7778999999999999998
Q ss_pred -----EEEEecCCcEEeeeeeccccCChhhHHHHHHHHHHHhcCCCCCCCCCCCCCcccCCCCCC
Q 035497 66 -----KVTRLMCGGFTLAIHFNHTMCDELGLVQFVKTIQEMARGSNTPSLFPVSQRERLCARNPP 125 (127)
Q Consensus 66 -----Qvt~f~~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg~~~~~~~P~~dr~~l~~r~~p 125 (127)
|||+|+|||++||+++||.++||.|+.+||++||++|||...+..+|.++|+.+.++++|
T Consensus 133 Pll~vQvt~f~~GG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~p~~~r~~~~~~~~p 197 (432)
T PF02458_consen 133 PLLAVQVTRFKCGGLALGVSFHHAVADGTGFSQFLKAWAEICRGGSPPSPPPVFDRSLLLPPNPP 197 (432)
T ss_dssp BSEEEEEEEETTTEEEEEEEEETTT--HHHHHHHHHHHHHHHHTTCHHHHHHCHSSTTSS-STTH
T ss_pred ceeEeeeeeecccceeeeeeceeccCcccchhHHHHHHHhhhcCCcccccccccchHHhhhccCc
Confidence 999999999999999999999999999999999999999854456789999988777544
No 5
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=99.95 E-value=6.6e-28 Score=200.57 Aligned_cols=93 Identities=28% Similarity=0.554 Sum_probs=86.2
Q ss_pred CChHHHHHHHHHHhhhhhcCCcceEeeCCCCceEEEecCCCeeEE-----------------------------------
Q 035497 21 KDPVKVIKEAISEALVYYYPFAGRIKQGPNRKVMVDCNGEGILFL----------------------------------- 65 (127)
Q Consensus 21 ~~~~~~Lk~sLs~~L~~f~~lAGrL~~~~~g~~~i~~~~~gv~fv----------------------------------- 65 (127)
.+++++||+||+++|++||||||||+. +++|+||++||.|+
T Consensus 55 ~~~~~~Lk~sLs~~L~~fyplAGRl~~----~~~i~cn~~Gv~fveA~~~~~l~d~l~~~~~~~~~~l~p~~~~~~~~~~ 130 (444)
T PLN00140 55 LQISIQLKRSLSETLSTFYPFSGRVKD----NLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLPCQPFSYESDP 130 (444)
T ss_pred hhHHHHHHHHHHHHHhhhhccCccccC----CceeEccCCCceEEEEEecCcHHHhcCCCCHHHHHhhCCCCcccccCCc
Confidence 467899999999999999999999986 48999999999998
Q ss_pred --------EEEEecCCcEEeeeeeccccCChhhHHHHHHHHHHHhcCCCCCCCCCCCCCc
Q 035497 66 --------KVTRLMCGGFTLAIHFNHTMCDELGLVQFVKTIQEMARGSNTPSLFPVSQRE 117 (127)
Q Consensus 66 --------Qvt~f~~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg~~~~~~~P~~dr~ 117 (127)
|||+|+|||++||+++||.++||.|+.+||++||++|||...+...|.|||.
T Consensus 131 ~~~Pll~vQvT~F~cGG~~lG~~~~H~v~Dg~s~~~Fl~~WA~~~rg~~~~~~~P~~dr~ 190 (444)
T PLN00140 131 EAIPQVAIQVNTFDCGGIALGLCFSHKIIDAATASAFLDSWAANTRGHYSEVINPDLFEA 190 (444)
T ss_pred cCCceEEEEEEEeccCcEEEEeeeceEcccHHHHHHHHHHHHHHhcCCCCCCCCcccccc
Confidence 9999999999999999999999999999999999999997655667999996
No 6
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics. This domain catalyses a condensation reaction to form peptide bonds in non-ribosomal peptide biosynthesis. It is usually found to the carboxy side of a phosphopantetheine binding domain (pp-binding). It has been shown that mutations in the HHXXXDG motif abolish activity suggesting this is part of the active site []. ; PDB: 2JGP_A 2VSQ_A 1L5A_A 2JUG_A 1Q9J_A.
Probab=97.37 E-value=0.00097 Score=50.50 Aligned_cols=85 Identities=14% Similarity=0.231 Sum_probs=58.9
Q ss_pred ChHHHHHHHHHHhhhhhcCCcceEeeCCC-CceEEEecC--CCe--------------------------------eEEE
Q 035497 22 DPVKVIKEAISEALVYYYPFAGRIKQGPN-RKVMVDCNG--EGI--------------------------------LFLK 66 (127)
Q Consensus 22 ~~~~~Lk~sLs~~L~~f~~lAGrL~~~~~-g~~~i~~~~--~gv--------------------------------~fvQ 66 (127)
-..+.|++|+.+++...+.|-.++..+++ ..+...... ..+ ..++
T Consensus 39 ~d~~~l~~A~~~~~~~h~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~ 118 (301)
T PF00668_consen 39 IDIERLRQALERLIARHPILRTRFEEDDGFEPYQRVLESSSIEIEYIDVSSDSDSEEEILELIEQELNRPFDLSEGPLFR 118 (301)
T ss_dssp --HHHHHHHHHHHHHH-GGGGEEEEECTTCSSEEEEESEEETTCEEEECCTS-HHHHHHHHHHHHHHCC---TCTSBSEE
T ss_pred cchHHHhhhhHhhhhhhhhhhheeeeecccccceeeeeccccccccccccccccchhhhhhhhhhhhhhcccccccchhh
Confidence 34789999999999999999999999875 222221100 001 1114
Q ss_pred EEEec--CCcEEeeeeeccccCChhhHHHHHHHHHHHhcCCC
Q 035497 67 VTRLM--CGGFTLAIHFNHTMCDELGLVQFVKTIQEMARGSN 106 (127)
Q Consensus 67 vt~f~--~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg~~ 106 (127)
+..+. .+...|.+.+||.++||.|+..|++.+.+.+.+..
T Consensus 119 ~~l~~~~~~~~~l~~~~hH~i~Dg~S~~~l~~~l~~~y~~~~ 160 (301)
T PF00668_consen 119 FTLIRTSDDEYFLLISFHHIICDGWSLNILLRELLQAYAGLS 160 (301)
T ss_dssp EEEEEEETTEEEEEEEEEGGG--HHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhcccccccccccccchhhhhhhHHhhhccc
Confidence 44443 45799999999999999999999999999998754
No 7
>PRK09294 acyltransferase PapA5; Provisional
Probab=97.28 E-value=0.0017 Score=53.33 Aligned_cols=83 Identities=12% Similarity=0.182 Sum_probs=60.1
Q ss_pred CChHHHHHHHHHHhhhhhcCCcceEeeCCCCceEEEecC-----------------------CCeeEEEEEEe-cCCcEE
Q 035497 21 KDPVKVIKEAISEALVYYYPFAGRIKQGPNRKVMVDCNG-----------------------EGILFLKVTRL-MCGGFT 76 (127)
Q Consensus 21 ~~~~~~Lk~sLs~~L~~f~~lAGrL~~~~~g~~~i~~~~-----------------------~gv~fvQvt~f-~~GG~~ 76 (127)
.-..+.|++||.+++..++.|..++..+++|.+++...+ .+..+.++..+ .+++..
T Consensus 33 ~lD~~~L~~Al~~l~~rhp~Lr~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 112 (416)
T PRK09294 33 VLDIDALSDAFDALLRAHPVLAAHLEQDSDGGWELVADDLLHPGIVVVDGDAARPLPELQLDQGVSLLALDVVPDDGGAR 112 (416)
T ss_pred CCCHHHHHHHHHHHHHhCHHhhEEEEECCCCceEEeeCCcCCCCeEEEecccccccCCCCCCCCCceEEEEEEEcCCCEE
Confidence 345789999999999999999999965555543222110 11112233333 346788
Q ss_pred eeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 77 LAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 77 lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
+.+.+||.++||.|+..|++.+.+.+.
T Consensus 113 l~l~~hH~i~DG~S~~~ll~el~~~Y~ 139 (416)
T PRK09294 113 VTLYIHHSIADAHHSASLLDELWSRYT 139 (416)
T ss_pred EEEEeccEeEccccHHHHHHHHHHHHH
Confidence 999999999999999999999998885
No 8
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=96.30 E-value=0.033 Score=43.64 Aligned_cols=81 Identities=15% Similarity=0.239 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHhhhhhcCCcceEeeCC--CCceEEEecC-----CCeeEE------------------------------
Q 035497 23 PVKVIKEAISEALVYYYPFAGRIKQGP--NRKVMVDCNG-----EGILFL------------------------------ 65 (127)
Q Consensus 23 ~~~~Lk~sLs~~L~~f~~lAGrL~~~~--~g~~~i~~~~-----~gv~fv------------------------------ 65 (127)
..+.|++-++..+..+|.+.-|+...+ .|+..+.-+. .-|..+
T Consensus 37 ~~~~l~~~~~~r~~~~p~fr~rv~~~~~~~~~p~W~~d~~fDl~~Hv~~~~l~~pg~~~~l~~~v~~l~~~pLd~~rPlW 116 (263)
T PF03007_consen 37 DVERLRARLEARLARHPRFRQRVVRVPFGLGRPRWVEDPDFDLDYHVRRVALPAPGDRAELQALVSRLASTPLDRSRPLW 116 (263)
T ss_pred hHHHHHHHHHHhhccCCccccceecCCCCCCCEEEEECCCCChHHceEEecCCCCCCHHHHHHHHHHHhcCCCCCCCCCc
Confidence 578999999999999999999888754 2444332211 111111
Q ss_pred EEEEe---cCCcEEeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 66 KVTRL---MCGGFTLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 66 Qvt~f---~~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
|+..+ ..|+++|.+.+||+++||.+...++..+.....
T Consensus 117 e~~li~g~~~g~~Al~~k~HHal~DG~~~~~l~~~l~~~~~ 157 (263)
T PF03007_consen 117 EVHLIEGLEGGRFALVLKVHHALADGVSLMRLLAALLDRSP 157 (263)
T ss_pred EEEEEecCCCCcEEEEEeehhhhhhhHhHHHHHHHHhCCCC
Confidence 66655 346789999999999999999999987766543
No 9
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2.3.1.84 from EC) enzymes approximately 500 residues long that seem to be restricted to Saccharomyces. These catalyse the esterification of isoamyl alcohol by acetyl coenzyme A [].; GO: 0004026 alcohol O-acetyltransferase activity, 0006066 alcohol metabolic process
Probab=94.36 E-value=0.27 Score=41.10 Aligned_cols=81 Identities=15% Similarity=0.105 Sum_probs=56.4
Q ss_pred HHHHHHHHHHhhhhhcCCcceEeeCC--------C-----Cce------EEEe------------cCCCeeEE-------
Q 035497 24 VKVIKEAISEALVYYYPFAGRIKQGP--------N-----RKV------MVDC------------NGEGILFL------- 65 (127)
Q Consensus 24 ~~~Lk~sLs~~L~~f~~lAGrL~~~~--------~-----g~~------~i~~------------~~~gv~fv------- 65 (127)
-+.|..||.+++..+|.|+-.+..++ . .+. +|+. .+.+-.+.
T Consensus 33 ~~~l~~AL~~~I~~~P~L~~~i~~~~~~~~~~~~~~~~~~~~P~~~~l~~I~l~dvV~~~~~e~~~~~d~~~~~~l~~~l 112 (480)
T PF07247_consen 33 KNQLYHALRSVILKHPILSVNIFGEDDPEDDAYYNSDNYTVRPYFKRLPSIDLDDVVSFEQREEFRDEDEKFDEELLEIL 112 (480)
T ss_pred HHHHHHHHHHHHHhCccEEEEEeccCCcccccccccccceecccccccCeEEHHHeeccCCccccccCCccccHHHHHHH
Confidence 35699999999999999998887752 1 121 2221 11110010
Q ss_pred ---------------EEEEecCC----cEEeeeeeccccCChhhHHHHHHHHHHHhcC
Q 035497 66 ---------------KVTRLMCG----GFTLAIHFNHTMCDELGLVQFVKTIQEMARG 104 (127)
Q Consensus 66 ---------------Qvt~f~~G----G~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg 104 (127)
++..+... ..-|.+.+||+++||.|...|.+.+-+....
T Consensus 113 ~~~~~~~~~~~~P~Wrl~vl~~~~~~~~~~i~f~~~H~i~DG~Sg~~Fh~~ll~~L~~ 170 (480)
T PF07247_consen 113 NNHNFPYDDPTKPLWRLIVLPNEDDESFQFIVFVFHHAIFDGMSGKIFHEDLLEALNS 170 (480)
T ss_pred hhcccCCCCCCCCCeEEEEECCCCCCcceEEEEEecccccccHHHHHHHHHHHHHHhh
Confidence 77777654 4678899999999999999999888777753
No 10
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.
Probab=93.65 E-value=0.17 Score=41.74 Aligned_cols=82 Identities=12% Similarity=0.226 Sum_probs=54.8
Q ss_pred ChHHHHHHHHHHhhhhhcCCcceEeeCC--CCce-EEEec--------------CCCe--------------------eE
Q 035497 22 DPVKVIKEAISEALVYYYPFAGRIKQGP--NRKV-MVDCN--------------GEGI--------------------LF 64 (127)
Q Consensus 22 ~~~~~Lk~sLs~~L~~f~~lAGrL~~~~--~g~~-~i~~~--------------~~gv--------------------~f 64 (127)
-..+.|++++.+.+..++.|--++...+ .|.. .+... +.+- .+
T Consensus 30 ld~~~l~~al~~~~~rh~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~p~dl~~Pl 109 (446)
T TIGR02946 30 LSFEALRALLESRLPLAPRFRQRLREVPLGLGHPYWVEDPDFDLDYHVRRVALPAPGTRRELLELVGRLMSTPLDRSRPL 109 (446)
T ss_pred ccHHHHHHHHHHhhccCChhhcccccCCCCCCCcEEeeCCCCChHHhhccccCCCCCCHHHHHHHHHHHhcCCCCCCCCC
Confidence 4478999999999999998887776542 2221 11100 0000 01
Q ss_pred EEEEEec---CCcEEeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 65 LKVTRLM---CGGFTLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 65 vQvt~f~---~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
.++..+. .+...+-+.+||.++||.|+..|++.+.+...
T Consensus 110 ~r~~li~~~~~~~~~l~~~~HH~i~DG~S~~~l~~~l~~~~~ 151 (446)
T TIGR02946 110 WEMHLIEGLAGGRFAVLTKVHHALADGVAGLRLLARLLDDDP 151 (446)
T ss_pred eEEEEEeccCCCeEEEEEEeehhhhchHHHHHHHHHHcCCCC
Confidence 1444443 57789999999999999999999988776553
No 11
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=93.01 E-value=0.46 Score=44.06 Aligned_cols=83 Identities=11% Similarity=0.131 Sum_probs=56.6
Q ss_pred CChHHHHHHHHHHhhhhhcCCcceEeeCCCCceEE-------------EecC-----------------------CCeeE
Q 035497 21 KDPVKVIKEAISEALVYYYPFAGRIKQGPNRKVMV-------------DCNG-----------------------EGILF 64 (127)
Q Consensus 21 ~~~~~~Lk~sLs~~L~~f~~lAGrL~~~~~g~~~i-------------~~~~-----------------------~gv~f 64 (127)
+-..+.|++|+..++..++-|--++..+++.-+++ +..+ .|..+
T Consensus 41 ~ld~~~l~~Al~~lv~rh~~LRt~f~~~~g~~~q~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~fdl~~~~pl 120 (1296)
T PRK10252 41 ELDAPLLARAVVAGLAEADTLRMRFTEDNGEVWQWVDPALTFPLPEIIDLRTQPDPHAAAQALMQADLQQDLRVDSGKPL 120 (1296)
T ss_pred CCCHHHHHHHHHHHHHhccceEEEEEcCCCeEEEEECCCCCCCcCceeecCCCCCHHHHHHHHHHHHhcCCcCCCCCCCC
Confidence 34578999999999999988877765542211111 1100 11112
Q ss_pred E--EEEEecCCcEEeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 65 L--KVTRLMCGGFTLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 65 v--Qvt~f~~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
. .+.+...+...+-+.+||.++||.|+..+++.++++++
T Consensus 121 ~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~ 161 (1296)
T PRK10252 121 VFHQLIQLGDNRWYWYQRYHHLLVDGFSFPAITRRIAAIYC 161 (1296)
T ss_pred eEEEEEEEcCCEEEEEEecCceeEccccHHHHHHHHHHHHH
Confidence 2 23333456788999999999999999999999998886
No 12
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]
Probab=92.70 E-value=0.24 Score=41.87 Aligned_cols=83 Identities=17% Similarity=0.375 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHhhhhhcCCcceEeeCCCC------------ceEEE----ecCCC---ee---EE-----------EEEE
Q 035497 23 PVKVIKEAISEALVYYYPFAGRIKQGPNR------------KVMVD----CNGEG---IL---FL-----------KVTR 69 (127)
Q Consensus 23 ~~~~Lk~sLs~~L~~f~~lAGrL~~~~~g------------~~~i~----~~~~g---v~---fv-----------Qvt~ 69 (127)
-++.||.||..+...-|.|+-+......+ .+.++ ..++. +. |+ |+..
T Consensus 38 ni~~lkkAl~~svka~piL~c~f~eg~~~~~Wq~i~d~~v~~~~i~l~~t~~~~~~~E~~fs~Fi~~k~~~t~~~PqI~v 117 (439)
T COG4908 38 NIDRLKKALRYSVKAVPILSCKFSEGEKRPFWQRILDFEVDQIAIHLEETKTDEPFGEVAFSRFIVRKLNITKESPQIKV 117 (439)
T ss_pred CHHHHHHHHHHHHHhhhhhhhhhhhcccchhHHHHhcccccceeEEEeeecccccchhHHHHHHHhcccccccCCCeEEE
Confidence 46899999998888888888876443210 11111 12211 11 11 4433
Q ss_pred e--c-CCcEEeeeeeccccCChhhHHHHHHHHHHHhcCC
Q 035497 70 L--M-CGGFTLAIHFNHTMCDELGLVQFVKTIQEMARGS 105 (127)
Q Consensus 70 f--~-~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg~ 105 (127)
| + |-+=.|.+.+||+++||.|+.+.+...++...+.
T Consensus 118 ~~~r~~~~d~L~i~lhH~~~DgrG~leyL~ll~~~Ys~L 156 (439)
T COG4908 118 FVVRQTVGDTLVINLHHAVCDGRGFLEYLYLLARLYSKL 156 (439)
T ss_pred eeehhccCcEEEEEechhhhcchhHHHHHHHHHHHHHhc
Confidence 3 2 5677889999999999999999999999999654
No 13
>PRK12467 peptide synthase; Provisional
Probab=92.68 E-value=0.85 Score=47.68 Aligned_cols=84 Identities=13% Similarity=0.063 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHhhhhhcCCcceEeeCCC--CceEEEecCC-----------------------------C-----eeEEE
Q 035497 23 PVKVIKEAISEALVYYYPFAGRIKQGPN--RKVMVDCNGE-----------------------------G-----ILFLK 66 (127)
Q Consensus 23 ~~~~Lk~sLs~~L~~f~~lAGrL~~~~~--g~~~i~~~~~-----------------------------g-----v~fvQ 66 (127)
.+++|++|+.+++...+.|--++...++ .-+++..... + ..+..
T Consensus 2681 d~~~l~~A~~~vv~rH~~LRT~f~~~~~~~~~~Qvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~R 2760 (3956)
T PRK12467 2681 DVERFRTAWQAVIDRHEILRSGFLWDGELEEPLQVVYKQARLPFSRLDWRDRADLEQALDALAAADRQQGFDLLSAPLLR 2760 (3956)
T ss_pred CHHHHHHHHHHHHHHhhhhheEEEecCCCCCceEEEcccccCceeEeecccchhHHHHHHHHHHhhhhcCCCCCCCcceE
Confidence 4689999999999998888777765432 1122221110 0 01113
Q ss_pred EEEe--cCCcEEeeeeeccccCChhhHHHHHHHHHHHhcCCC
Q 035497 67 VTRL--MCGGFTLAIHFNHTMCDELGLVQFVKTIQEMARGSN 106 (127)
Q Consensus 67 vt~f--~~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg~~ 106 (127)
++.+ ..+...+-+.+||.+.||.|+..+++.+.+.+.+..
T Consensus 2761 ~~l~~~~~~~~~l~l~~HHii~DGwS~~~l~~el~~~Y~~~~ 2802 (3956)
T PRK12467 2761 LTLVRTGEDRHHLIYTNHHILMDGWSGSQLLGEVLQRYFGQP 2802 (3956)
T ss_pred EEEEEEcCcEEEEEEecCceeEcCccHHHHHHHHHHHhcCCC
Confidence 3333 456778889999999999999999999999998754
No 14
>PRK12316 peptide synthase; Provisional
Probab=91.58 E-value=1.4 Score=47.13 Aligned_cols=84 Identities=12% Similarity=0.061 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHhhhhhcCCcceEeeCCC--CceEEEecCC-----------------------------C-----eeEEE
Q 035497 23 PVKVIKEAISEALVYYYPFAGRIKQGPN--RKVMVDCNGE-----------------------------G-----ILFLK 66 (127)
Q Consensus 23 ~~~~Lk~sLs~~L~~f~~lAGrL~~~~~--g~~~i~~~~~-----------------------------g-----v~fvQ 66 (127)
..++|++|+.+++...+.|-=++..+++ +-+++..... + -.+..
T Consensus 1591 d~~~l~~A~~~~v~rh~~LRT~f~~~~~~~~~~q~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~l~~~pl~r 1670 (5163)
T PRK12316 1591 DPDRFRAAWQATVDRHEILRSGFLWQDGLEQPLQVIHKQVELPFAELDWRGREDLGQALDALAQAERQKGFDLTRAPLLR 1670 (5163)
T ss_pred CHHHHHHHHHHHHHHHHHhheEEEecCCCCceeEEEecCCCCceeEecCCCchhHHHHHHHHHHHHhhCCCCCCCCCcEE
Confidence 4689999999999999888777665432 2222221110 0 01113
Q ss_pred EEEe--cCCcEEeeeeeccccCChhhHHHHHHHHHHHhcCCC
Q 035497 67 VTRL--MCGGFTLAIHFNHTMCDELGLVQFVKTIQEMARGSN 106 (127)
Q Consensus 67 vt~f--~~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg~~ 106 (127)
++.+ ..+...+-+.+||.++||.|+..+++.++..+.|..
T Consensus 1671 ~~l~~~~~~~~~l~~~~hH~i~Dg~S~~~l~~~l~~~Y~~~~ 1712 (5163)
T PRK12316 1671 LVLVRTGEGRHHLIYTNHHILMDGWSNAQLLGEVLQRYAGQP 1712 (5163)
T ss_pred EEEEEECCCeEEEEEEecceeeccccHHHHHHHHHHHhcCCC
Confidence 4444 346678889999999999999999999999998754
No 15
>PRK12316 peptide synthase; Provisional
Probab=91.24 E-value=1.5 Score=46.92 Aligned_cols=84 Identities=15% Similarity=0.081 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHhhhhhcCCcceEeeCCC-C-ceEEEecCC----------------------------------CeeEEE
Q 035497 23 PVKVIKEAISEALVYYYPFAGRIKQGPN-R-KVMVDCNGE----------------------------------GILFLK 66 (127)
Q Consensus 23 ~~~~Lk~sLs~~L~~f~~lAGrL~~~~~-g-~~~i~~~~~----------------------------------gv~fvQ 66 (127)
.+++|++|+.+++...+.|--++....+ | -+++...+. ...+..
T Consensus 4137 d~~~l~~Aw~~vv~rh~iLRT~f~~~~~~~~~~QvV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~R 4216 (5163)
T PRK12316 4137 DVERFRAAWQAALDRHDVLRSGFVWQGELGRPLQVVHKQVSLPFAELDWRGRADLQAALDALAAAERERGFDLQRAPLLR 4216 (5163)
T ss_pred CHHHHHHHHHHHHHhhhHhheEEEecCCCCCceEEecccccCceEeccCCchhhHHHHHHHHHHHHHhCCCCcCCCCceE
Confidence 4689999999999999988777765441 2 223222110 111123
Q ss_pred EEEe--cCCcEEeeeeeccccCChhhHHHHHHHHHHHhcCCC
Q 035497 67 VTRL--MCGGFTLAIHFNHTMCDELGLVQFVKTIQEMARGSN 106 (127)
Q Consensus 67 vt~f--~~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg~~ 106 (127)
++.+ ..+...+.+++||.+.||.|+..+++.+.+...|..
T Consensus 4217 ~~l~~~~~~~~~l~l~~HH~i~DGwS~~il~~el~~~Y~~~~ 4258 (5163)
T PRK12316 4217 LVLVRTAEGRHHLIYTNHHILMDGWSNSQLLGEVLERYSGRP 4258 (5163)
T ss_pred EEEEEEcCCEEEEEEEccceeeccccHHHHHHHHHHHhcCCC
Confidence 3333 456678889999999999999999999999998754
No 16
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component). dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase.
Probab=90.62 E-value=2.4 Score=35.59 Aligned_cols=28 Identities=32% Similarity=0.546 Sum_probs=25.7
Q ss_pred EeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 76 TLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 76 ~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
-|++++.|-+.||.-...||+.|.++..
T Consensus 367 ~lsLt~DHRviDGa~aa~Fl~~l~~~le 394 (403)
T TIGR01347 367 YLALSYDHRLIDGKEAVTFLVTIKELLE 394 (403)
T ss_pred EEEEEecchhhChHHHHHHHHHHHHHhc
Confidence 3889999999999999999999998865
No 17
>PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2.3.1 from EC, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide []. It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). The domain is also found in the dihydrolipoamide succinyltransferase component of the 2-oxoglutarate dehydrogenase complex 2.3.1.61 from EC. These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1EAF_A 1EAA_A 1DPD_A 1EAE_A 1DPC_A 1EAB_A 1DPB_A 1EAC_A 1EAD_A 2II5_H ....
Probab=90.10 E-value=3.8 Score=31.72 Aligned_cols=29 Identities=24% Similarity=0.568 Sum_probs=25.0
Q ss_pred EEeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 75 FTLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 75 ~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
+-+++++.|-+.||.-...|++.+.+...
T Consensus 196 ~~lslt~DHRvidG~~aa~Fl~~l~~~le 224 (231)
T PF00198_consen 196 MNLSLTFDHRVIDGAEAARFLKDLKELLE 224 (231)
T ss_dssp EEEEEEEETTTS-HHHHHHHHHHHHHHHH
T ss_pred EEeEEeccceEEcHHHHHHHHHHHHHHHh
Confidence 45778999999999999999999998865
No 18
>PRK12467 peptide synthase; Provisional
Probab=89.81 E-value=1.9 Score=45.30 Aligned_cols=83 Identities=16% Similarity=0.157 Sum_probs=57.8
Q ss_pred CChHHHHHHHHHHhhhhhcCCcceEeeCCCCceEEEecCC--Ce----------------------------------eE
Q 035497 21 KDPVKVIKEAISEALVYYYPFAGRIKQGPNRKVMVDCNGE--GI----------------------------------LF 64 (127)
Q Consensus 21 ~~~~~~Lk~sLs~~L~~f~~lAGrL~~~~~g~~~i~~~~~--gv----------------------------------~f 64 (127)
.-..+.|++++.+++...+-|--++..++++-.++..... .+ .+
T Consensus 83 ~lD~~~L~~A~~~vv~rH~~LRt~f~~~~~~~~q~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~fdL~~~pl 162 (3956)
T PRK12467 83 ELDVSALRRAFDALVARHESLRTRFVQDEEGFRQVIDASLSLTIPLDDLANEQGRARESQIEAYINEEVARPFDLANGPL 162 (3956)
T ss_pred CCCHHHHHHHHHHHHHHhhhheEEEEecCCeEEEEEcCCCCCceeEEecccCChhhHHHHHHHHHHHHhcCCCCCCCCCc
Confidence 3457899999999999999998888754432121111000 00 01
Q ss_pred EEEEEe--cCCcEEeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 65 LKVTRL--MCGGFTLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 65 vQvt~f--~~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
..++.+ ..+...+-+.+||.++||.|+.-+++.+++.+.
T Consensus 163 ~r~~l~~~~~~~~~l~l~~HHii~DG~S~~~l~~el~~~Y~ 203 (3956)
T PRK12467 163 LRVRLLRLADDEHVLVVTLHHIISDGWSMRVLVEELVQLYS 203 (3956)
T ss_pred eEEEEEEECCCcEEEEEecCeeeEccchHHHHHHHHHHHHH
Confidence 144444 356788899999999999999999999998875
No 19
>PRK05704 dihydrolipoamide succinyltransferase; Validated
Probab=87.77 E-value=4.2 Score=34.22 Aligned_cols=28 Identities=32% Similarity=0.554 Sum_probs=25.5
Q ss_pred eeeeeccccCChhhHHHHHHHHHHHhcC
Q 035497 77 LAIHFNHTMCDELGLVQFVKTIQEMARG 104 (127)
Q Consensus 77 lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg 104 (127)
|++++.|=+.||.-...||+.|.+....
T Consensus 372 lsls~DHRviDGa~aa~Fl~~l~~~le~ 399 (407)
T PRK05704 372 LALSYDHRIIDGKEAVGFLVTIKELLED 399 (407)
T ss_pred EEEEechhhhCcHHHHHHHHHHHHHhhC
Confidence 7899999999999999999999987653
No 20
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score.
Probab=87.77 E-value=3.8 Score=34.72 Aligned_cols=29 Identities=14% Similarity=0.319 Sum_probs=26.0
Q ss_pred EeeeeeccccCChhhHHHHHHHHHHHhcC
Q 035497 76 TLAIHFNHTMCDELGLVQFVKTIQEMARG 104 (127)
Q Consensus 76 ~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg 104 (127)
-|++++.|-+.||.-...|++.|.++...
T Consensus 401 ~lsls~DHRviDGa~aa~Fl~~lk~~lE~ 429 (435)
T TIGR01349 401 SVTLSCDHRVIDGAVGAEFLKSFKKYLEN 429 (435)
T ss_pred EEeEeecchhhCcHHHHHHHHHHHHHHhC
Confidence 47899999999999999999999988643
No 21
>PRK05691 peptide synthase; Validated
Probab=87.49 E-value=2.8 Score=44.32 Aligned_cols=83 Identities=10% Similarity=0.043 Sum_probs=56.4
Q ss_pred ChHHHHHHHHHHhhhhhcCCcceEeeCCCCceEEEe------------cCC------------------------CeeEE
Q 035497 22 DPVKVIKEAISEALVYYYPFAGRIKQGPNRKVMVDC------------NGE------------------------GILFL 65 (127)
Q Consensus 22 ~~~~~Lk~sLs~~L~~f~~lAGrL~~~~~g~~~i~~------------~~~------------------------gv~fv 65 (127)
-..++|++++..++...+.|--++...+++.+++.. .+. .-.+.
T Consensus 710 ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~ 789 (4334)
T PRK05691 710 LDEAALRASFQRLVERHESLRTRFYERDGVALQRIDAQGEFALQRIDLSDLPEAEREARAAQIREEEARQPFDLEKGPLL 789 (4334)
T ss_pred CCHHHHHHHHHHHHHHhhhhcEEEEccCCeEEEEECCCCCCcceEEeCCCCChHHHHHHHHHHHHHHhcCCCCCCCCCce
Confidence 357899999999999999887777543322222111 100 00111
Q ss_pred EEEEe--cCCcEEeeeeeccccCChhhHHHHHHHHHHHhcC
Q 035497 66 KVTRL--MCGGFTLAIHFNHTMCDELGLVQFVKTIQEMARG 104 (127)
Q Consensus 66 Qvt~f--~~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg 104 (127)
.++.+ ..+...+-+.+||.++||.|+..+++.+++.+++
T Consensus 790 R~~l~~~~~~~~~l~l~~HHii~DG~S~~ll~~el~~~Y~~ 830 (4334)
T PRK05691 790 RVTLVRLDDEEHQLLVTLHHIVADGWSLNILLDEFSRLYAA 830 (4334)
T ss_pred EEEEEEEcCCeEEEEEeeCceeeccchHHHHHHHHHHHHHH
Confidence 33333 3456788999999999999999999999998853
No 22
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=87.17 E-value=6.2 Score=32.85 Aligned_cols=29 Identities=24% Similarity=0.582 Sum_probs=26.3
Q ss_pred EEeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 75 FTLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 75 ~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
+-|+++++|-++||.-...|++.|.+...
T Consensus 375 m~lslt~DHRviDG~~aa~Fl~~l~~~le 403 (411)
T PRK11856 375 MPLSLSFDHRVIDGADAARFLKALKELLE 403 (411)
T ss_pred EEEeEEeehhhcCcHHHHHHHHHHHHHHh
Confidence 56889999999999999999999998763
No 23
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Probab=86.99 E-value=4.1 Score=35.48 Aligned_cols=28 Identities=21% Similarity=0.380 Sum_probs=25.4
Q ss_pred EeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 76 TLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 76 ~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
-|++++.|-+.||.-...||+.|.+...
T Consensus 512 ~ltls~DHRviDGa~aa~Fl~~~~~~le 539 (546)
T TIGR01348 512 PLSLSYDHRVIDGADAARFTTYICESLA 539 (546)
T ss_pred EEeEeccchhcChHHHHHHHHHHHHHHh
Confidence 3789999999999999999999998764
No 24
>PLN02226 2-oxoglutarate dehydrogenase E2 component
Probab=86.81 E-value=4.5 Score=34.80 Aligned_cols=29 Identities=17% Similarity=0.498 Sum_probs=26.1
Q ss_pred EEeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 75 FTLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 75 ~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
+-|++++.|=+.||.-...|++.|.++-.
T Consensus 426 m~lsLs~DHRVIDGa~aA~FL~~lk~~LE 454 (463)
T PLN02226 426 MYVALTYDHRLIDGREAVYFLRRVKDVVE 454 (463)
T ss_pred EEEeEecchhhhCcHHHHHHHHHHHHHhc
Confidence 45788999999999999999999998864
No 25
>PRK05691 peptide synthase; Validated
Probab=86.79 E-value=3.6 Score=43.62 Aligned_cols=82 Identities=7% Similarity=0.060 Sum_probs=56.4
Q ss_pred ChHHHHHHHHHHhhhhhcCCcceEeeCCCCceEEEecCC------------------------------------CeeEE
Q 035497 22 DPVKVIKEAISEALVYYYPFAGRIKQGPNRKVMVDCNGE------------------------------------GILFL 65 (127)
Q Consensus 22 ~~~~~Lk~sLs~~L~~f~~lAGrL~~~~~g~~~i~~~~~------------------------------------gv~fv 65 (127)
-..++|++|+.+++...+.|--++...++.-+++..... .-.+.
T Consensus 1763 ld~~~L~~A~~~lv~rH~~LRT~f~~~~~~~~q~v~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~ 1842 (4334)
T PRK05691 1763 LDVDRFEAALQALILRHETLRTTFPSVDGVPVQQVAEDSGLRMDWQDFSALPADARQQRLQQLADSEAHQPFDLERGPLL 1842 (4334)
T ss_pred CCHHHHHHHHHHHHHhCCcceEEEEccCCeEEEEECCCCCCCeeEeeccCCChHhHHHHHHHHHHHHHhcCCCCCCCcee
Confidence 457899999999999999887777544322111111000 01122
Q ss_pred EEEEec--CCcEEeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 66 KVTRLM--CGGFTLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 66 Qvt~f~--~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
+++.++ .+...+-+++||.++||.|+..+++.++++++
T Consensus 1843 r~~l~~~~~~~~~l~~~~HHii~DG~S~~ll~~el~~~Y~ 1882 (4334)
T PRK05691 1843 RACLVKAAEREHYFVLTLHHIVTEGWAMDIFARELGALYE 1882 (4334)
T ss_pred EEEEEEeCCCcEEEEEecchhhhhhhhHHHHHHHHHHHHH
Confidence 444444 34577889999999999999999999999885
No 26
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Probab=85.95 E-value=3.2 Score=33.67 Aligned_cols=29 Identities=17% Similarity=0.334 Sum_probs=26.0
Q ss_pred EeeeeeccccCChhhHHHHHHHHHHHhcC
Q 035497 76 TLAIHFNHTMCDELGLVQFVKTIQEMARG 104 (127)
Q Consensus 76 ~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg 104 (127)
-|++++.|=+.||.-...||+.|.+....
T Consensus 271 ~lslt~DHRviDGa~aa~Fl~~lk~~LE~ 299 (306)
T PRK11857 271 HLTVAADHRWIDGATIGRFASRVKELLEK 299 (306)
T ss_pred EEeEecchhhhCcHHHHHHHHHHHHHhcC
Confidence 47888999999999999999999998754
No 27
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=85.88 E-value=3.8 Score=35.57 Aligned_cols=29 Identities=14% Similarity=0.441 Sum_probs=25.8
Q ss_pred EEeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 75 FTLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 75 ~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
+-|+++++|-++||.-...||+.|.+...
T Consensus 512 m~lslt~DHRviDG~~aa~Fl~~l~~~le 540 (547)
T PRK11855 512 LPLSLSYDHRVIDGATAARFTNYLKQLLA 540 (547)
T ss_pred EEEeEEccchhcCcHHHHHHHHHHHHHHh
Confidence 34789999999999999999999998763
No 28
>PLN02528 2-oxoisovalerate dehydrogenase E2 component
Probab=85.07 E-value=6.4 Score=33.17 Aligned_cols=29 Identities=17% Similarity=0.290 Sum_probs=26.1
Q ss_pred EeeeeeccccCChhhHHHHHHHHHHHhcC
Q 035497 76 TLAIHFNHTMCDELGLVQFVKTIQEMARG 104 (127)
Q Consensus 76 ~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg 104 (127)
-|++++.|-+.||.-...||+.|.+....
T Consensus 379 ~lslt~DHRviDGa~aa~Fl~~lk~~le~ 407 (416)
T PLN02528 379 TVTIGADHRVLDGATVARFCNEWKSYVEK 407 (416)
T ss_pred EEeEeccchhcCcHHHHHHHHHHHHHHhC
Confidence 48899999999999999999999988753
No 29
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Probab=84.94 E-value=5.8 Score=35.16 Aligned_cols=28 Identities=18% Similarity=0.421 Sum_probs=25.5
Q ss_pred EeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 76 TLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 76 ~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
-|+++++|-+.||.-...|++.|.+...
T Consensus 599 ~lslt~DHRviDGa~aa~Fl~~lk~~LE 626 (633)
T PRK11854 599 PLSLSYDHRVIDGADGARFITIINDRLS 626 (633)
T ss_pred EEeEEccchhcchHHHHHHHHHHHHHHh
Confidence 3788999999999999999999998764
No 30
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Probab=84.72 E-value=5.6 Score=32.82 Aligned_cols=29 Identities=21% Similarity=0.512 Sum_probs=25.7
Q ss_pred EeeeeeccccCChhhHHHHHHHHHHHhcC
Q 035497 76 TLAIHFNHTMCDELGLVQFVKTIQEMARG 104 (127)
Q Consensus 76 ~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg 104 (127)
-|++++.|=+.||.-...|++.|.+....
T Consensus 313 ~lsls~DHRviDGa~aa~Fl~~lk~~lE~ 341 (347)
T PRK14843 313 SLGLTIDHRVVDGMAGAKFMKDLKELIET 341 (347)
T ss_pred EEEEecchhhhCcHHHHHHHHHHHHHhcC
Confidence 37889999999999999999999987653
No 31
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
Probab=82.02 E-value=9.4 Score=33.64 Aligned_cols=28 Identities=21% Similarity=0.452 Sum_probs=25.9
Q ss_pred eeeeeccccCChhhHHHHHHHHHHHhcC
Q 035497 77 LAIHFNHTMCDELGLVQFVKTIQEMARG 104 (127)
Q Consensus 77 lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg 104 (127)
|++++.|=+.||.....||+.|.+....
T Consensus 554 lsls~DHRviDGa~aa~Fl~~lk~~LE~ 581 (590)
T TIGR02927 554 LPLTYDHQLIDGADAGRFLTTIKDRLEE 581 (590)
T ss_pred EeeeccchhcCcHHHHHHHHHHHHHHhC
Confidence 7899999999999999999999998754
No 32
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional
Probab=80.57 E-value=13 Score=31.47 Aligned_cols=29 Identities=28% Similarity=0.576 Sum_probs=26.1
Q ss_pred EEeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 75 FTLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 75 ~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
+-|++++.|-+.||.-...||+.|.+.-.
T Consensus 381 m~lsLs~DHRviDGa~AA~FL~~lk~~LE 409 (418)
T PTZ00144 381 MYLALTYDHRLIDGRDAVTFLKKIKDLIE 409 (418)
T ss_pred EEEEEecchhhhChHHHHHHHHHHHHHhc
Confidence 45889999999999999999999998764
No 33
>PRK13757 chloramphenicol acetyltransferase; Provisional
Probab=80.50 E-value=2.2 Score=33.03 Aligned_cols=28 Identities=25% Similarity=0.600 Sum_probs=24.7
Q ss_pred EEeeeeeccccCChhhHHHHHHHHHHHh
Q 035497 75 FTLAIHFNHTMCDELGLVQFVKTIQEMA 102 (127)
Q Consensus 75 ~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~ 102 (127)
+-|++.+||+++||.=...|++...+.+
T Consensus 185 mPvSvqvHHa~~DG~Hv~~F~~~lQ~~~ 212 (219)
T PRK13757 185 MPLAIQVHHAVCDGFHVGRMLNELQQYC 212 (219)
T ss_pred EEEEEEEehhccchHHHHHHHHHHHHHH
Confidence 6677889999999999999999888765
No 34
>PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2.3.1.28 from EC) [] catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT [], evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see IPR001451 from INTERPRO). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen [].; GO: 0008811 chloramphenicol O-acetyltransferase activity; PDB: 1CIA_A 4CLA_A 1QCA_A 2CLA_A 1CLA_A 3CLA_A 3U9F_K 1PD5_F 1Q23_F 3U9B_F ....
Probab=73.61 E-value=3.7 Score=31.36 Aligned_cols=24 Identities=21% Similarity=0.490 Sum_probs=19.3
Q ss_pred EEeeeeeccccCChhhHHHHHHHH
Q 035497 75 FTLAIHFNHTMCDELGLVQFVKTI 98 (127)
Q Consensus 75 ~~lg~~~~H~v~Dg~s~~~Fl~~W 98 (127)
+-|++.+||+++||.=...|++..
T Consensus 182 mPvsiqvhHa~~DG~Hv~~F~~~l 205 (206)
T PF00302_consen 182 MPVSIQVHHALVDGYHVGQFFEEL 205 (206)
T ss_dssp EEEEEEEETTT--HHHHHHHHHHH
T ss_pred EEEEEEEecccccHHHHHHHHHHh
Confidence 678889999999999999998764
No 35
>PLN02744 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Probab=71.54 E-value=29 Score=30.44 Aligned_cols=28 Identities=11% Similarity=0.241 Sum_probs=25.4
Q ss_pred EeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 76 TLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 76 ~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
-|++++.|-+.||.-...||+.|.+...
T Consensus 505 ~lsLs~DHRvIDGa~AA~FL~~lk~~LE 532 (539)
T PLN02744 505 SVTLSCDHRVIDGAIGAEWLKAFKGYIE 532 (539)
T ss_pred EEeEecchhhhCcHHHHHHHHHHHHHhc
Confidence 3788999999999999999999998764
No 36
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed
Probab=64.69 E-value=44 Score=31.98 Aligned_cols=31 Identities=23% Similarity=0.466 Sum_probs=28.2
Q ss_pred EeeeeeccccCChhhHHHHHHHHHHHhcCCC
Q 035497 76 TLAIHFNHTMCDELGLVQFVKTIQEMARGSN 106 (127)
Q Consensus 76 ~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg~~ 106 (127)
-|.+++.|-+.||.....||+.|.++.-|+.
T Consensus 322 tLTlTyDHRVIdGA~sg~FL~~ik~lLeG~d 352 (1228)
T PRK12270 322 TLTSTYDHRIIQGAESGEFLRTIHQLLLGED 352 (1228)
T ss_pred EeeeeccceeeccHhHHHHHHHHHHHHhccc
Confidence 5678899999999999999999999999864
No 37
>KOG0558 consensus Dihydrolipoamide transacylase (alpha-keto acid dehydrogenase E2 subunit) [Energy production and conversion]
Probab=60.92 E-value=30 Score=29.28 Aligned_cols=39 Identities=21% Similarity=0.322 Sum_probs=30.3
Q ss_pred EEEEecCCc-------EEeeeeeccccCChhhHHHHHHHHHHHhcC
Q 035497 66 KVTRLMCGG-------FTLAIHFNHTMCDELGLVQFVKTIQEMARG 104 (127)
Q Consensus 66 Qvt~f~~GG-------~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~rg 104 (127)
.|.+|..-| +.+.++..|-|.||..+..|-+.|-+....
T Consensus 420 ~vPrFnkk~~V~~a~IM~VswsADHRViDGaTmarFsn~WK~YlE~ 465 (474)
T KOG0558|consen 420 KVPRFNKKGEVYPASIMMVSWSADHRVIDGATMARFSNQWKEYLEN 465 (474)
T ss_pred cccccCCCCCEEEeEEEEEEeecCceeeccHHHHHHHHHHHHHhhC
Confidence 556665433 456778899999999999999999987643
No 38
>COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms]
Probab=45.59 E-value=29 Score=27.01 Aligned_cols=29 Identities=21% Similarity=0.359 Sum_probs=23.8
Q ss_pred EEeeeeeccccCChhhHHHHHHHHHHHhc
Q 035497 75 FTLAIHFNHTMCDELGLVQFVKTIQEMAR 103 (127)
Q Consensus 75 ~~lg~~~~H~v~Dg~s~~~Fl~~Wa~~~r 103 (127)
+-+++..||+.+||.-..+|+........
T Consensus 184 lPlavq~hHA~vDG~Hi~~l~~~lQ~~~~ 212 (219)
T COG4845 184 LPLAVQAHHANVDGFHIGQLFDQLQTLFS 212 (219)
T ss_pred EeEEEEecccccchhhHHHHHHHHHHHhc
Confidence 34567899999999999999988776653
No 39
>PF00755 Carn_acyltransf: Choline/Carnitine o-acyltransferase; InterPro: IPR000542 A number of eukaryotic acetyltransferases can, on the basis of sequence similarities, be grouped together into a family. These enzymes include: Choline o-acetyltransferase 2.3.1.6 from EC, an enzyme that catalyses the biosynthesis of the neurotransmitter acetylcholine []. Carnitine o-acetyltransferase 2.3.1.7 from EC []. Peroxisomal carnitine octanoyltransferase 2.3.1.137 from EC, a fatty acid beta-oxidation pathway enzyme which is involved in the transport of medium-chain acyl-coenzyme A's from peroxisome to mitochondria []. Mitochondrial carnitine palmitoyltransferases I and II 2.3.1.21 from EC (CPT), enzymes involved in fatty acid metabolism and transport []. Mycoplasma pneumoniae putative acetyltransferase C09_orf600. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 2DEB_B 2H4T_A 2FW3_A 2RCU_B 2FYO_A 1S5O_A 1NM8_A 1T7Q_B 2H3W_B 1NDI_B ....
Probab=26.61 E-value=1.2e+02 Score=26.54 Aligned_cols=32 Identities=19% Similarity=0.360 Sum_probs=23.2
Q ss_pred EEEEecCCcEEeeeeeccccCChhhHHHHHHHHH
Q 035497 66 KVTRLMCGGFTLAIHFNHTMCDELGLVQFVKTIQ 99 (127)
Q Consensus 66 Qvt~f~~GG~~lg~~~~H~v~Dg~s~~~Fl~~Wa 99 (127)
|+..+++|- .|+.+.|+.+||..+..++....
T Consensus 295 q~iV~~nG~--~g~~~EHS~~DG~~~~~~~~~i~ 326 (591)
T PF00755_consen 295 QLIVFKNGR--AGLNFEHSWADGTVVLRLVEFIY 326 (591)
T ss_dssp EEEEETTS---EEEEE-STT--HHHHHHHHHHHH
T ss_pred eEEEcCCCC--eEEecCCCCchhHHHHHHHHhhh
Confidence 887887654 48999999999999999988744
No 40
>PF12993 DUF3877: Domain of unknown function, E. rectale Gene description (DUF3877); InterPro: IPR024539 This entry represents proteins of unknown function found primarily in Firmicutes. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=23.77 E-value=21 Score=26.92 Aligned_cols=57 Identities=21% Similarity=0.254 Sum_probs=37.2
Q ss_pred CCCCCC-CCCCCCCChHHHHHHHHHHhhhhhcCCcceEeeCC-CCceEEEecCCCeeEE
Q 035497 9 NNPSSS-PPILREKDPVKVIKEAISEALVYYYPFAGRIKQGP-NRKVMVDCNGEGILFL 65 (127)
Q Consensus 9 ~~~~~~-~~~~~~~~~~~~Lk~sLs~~L~~f~~lAGrL~~~~-~g~~~i~~~~~gv~fv 65 (127)
=||.|+ +.....+...+.++.+|..--..-.+--|++.... .+|..+....+|+.+|
T Consensus 29 YYPlsSLn~~l~~e~~~~em~~~L~~f~~~~~~~lG~v~vs~k~eRFCf~IP~~g~~YV 87 (175)
T PF12993_consen 29 YYPLSSLNHFLGTEDDEEEMQEALEEFPEYVKDRLGEVEVSHKGERFCFHIPEEGSEYV 87 (175)
T ss_pred EccHHHHHHHhcccccHHHHHHHHHHhHHHHHhhhccEEEEecCcEEEEEcCcHHHHHH
Confidence 355553 33334455566777777765555455557777765 5688999899998877
Done!