BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035500
(606 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224115112|ref|XP_002332240.1| predicted protein [Populus trichocarpa]
gi|222831853|gb|EEE70330.1| predicted protein [Populus trichocarpa]
Length = 768
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/590 (57%), Positives = 434/590 (73%), Gaps = 15/590 (2%)
Query: 11 RYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYPLIDVFTEMDS 70
RYLDSC++ E PNS+VLSWF +A+IQ KCSI +L+QL NADIYPLIDVF +DS
Sbjct: 1 RYLDSCKKHEVLPNSAVLSWFYKAEIQKSELGKCSIKFFLNQLCNADIYPLIDVFLAIDS 60
Query: 71 FDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDLCQVGSSCHVL 130
D++AVDIL + PC EEY+M L+ I+ KLRVVDL +++ + L +LC G +CH+L
Sbjct: 61 SDVDAVDILHESPCNFNEEYVMPLLQTINLKLRVVDLHDMSPEENFLQNLCHHGLACHIL 120
Query: 131 ILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMCETRIVNLWTT 190
+R+T+I+KLNM G FM L+TL+LDFC+S+ SL +DCFSCMP LM LSMCETR+ NLWTT
Sbjct: 121 NMRSTHIQKLNMAGTFMQLHTLNLDFCTSIGSLDKDCFSCMPSLMRLSMCETRVANLWTT 180
Query: 191 TAAISKLPYLMELRFQMCLCCKDTGPCRASLDAKNQ------ASGADDRVKDNEDQIVCK 244
TAA+SKLP L+ELRFQ CLCCKDTGPC AS K + S + +E +
Sbjct: 181 TAALSKLPSLVELRFQNCLCCKDTGPCPASFGDKARIAFEKLGSAPLNMCLSSETSSI-- 238
Query: 245 KFRDADEVELPKYLRTMNLMELS-SCLSPNLNGHAEMLDEVNDSNEFPGGAHKQDLMDAN 303
RDA +L+ L+ S L +G + L + + E +
Sbjct: 239 SIRDATFQGFHAKENCGDLLSLTGSALIKEGSGKFDNLSHIREV-EISSCLQRNG---RP 294
Query: 304 VKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPY 363
LK YISHHPSPICFEKHYREYM+A LP+LEVLDN I ++DRE+ +++F++Y+E+LPY
Sbjct: 295 TSLKNYISHHPSPICFEKHYREYMVALLPRLEVLDNFSITKMDREMGRTIFSKYYEYLPY 354
Query: 364 KRKHKESVVSLLQKREMGTSG-NYQNSSKPKQP-NIHRTQHFFSRSLSAAKLGSSAWPLL 421
KR++K+SVV++LQKREMGT+G + N SK KQ + ++ FSRSL+AAKLGS+AWPLL
Sbjct: 355 KRQNKQSVVTVLQKREMGTTGASCPNFSKFKQSCHYGKSPCHFSRSLTAAKLGSAAWPLL 414
Query: 422 HPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGG 481
HP+ +FSHIYKEG+KR+R RQFEY+PS+ LM +GTLDGEV+VINHE+G + Y+PS
Sbjct: 415 HPLHTFSHIYKEGSKRLRARQFEYHPSDSRLMVYGTLDGEVVVINHESGKLVGYVPSANN 474
Query: 482 TNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVH 541
NSVLGLCWLKKYPSKL+AGSD+GC++LFD++HIPP V+D ++ V T+ DF+QLTSVH
Sbjct: 475 MNSVLGLCWLKKYPSKLLAGSDNGCLKLFDISHIPPIVSDVNCSAGVVTFDDFDQLTSVH 534
Query: 542 VNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSPL 591
VNS DDQFLASGYSK+VALYDI + K L LFT+MHREPINV KF+HHSP
Sbjct: 535 VNSGDDQFLASGYSKDVALYDIFSGKRLHLFTNMHREPINVVKFAHHSPF 584
>gi|359480634|ref|XP_002279255.2| PREDICTED: uncharacterized protein LOC100247452 [Vitis vinifera]
Length = 804
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/600 (56%), Positives = 442/600 (73%), Gaps = 20/600 (3%)
Query: 1 MAMDMSTLEARYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYP 60
MA+D+STL+ARYLDSC+R PNS+VLSWF +AKIQ ++EKCSI+V LD L+ AD P
Sbjct: 29 MAIDISTLDARYLDSCKRHGVVPNSAVLSWFYKAKIQKSSHEKCSIVVLLDHLRAADFSP 88
Query: 61 LIDVFTEMDSFDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDL 120
LIDVF E+DS +I+AVDIL + P L EEY++S++ I+ KLR+V+L +++ D DL
Sbjct: 89 LIDVFLEIDSSNIDAVDILHESPIILTEEYVLSMIRTINLKLRLVELRDVSFGKDFFRDL 148
Query: 121 CQVGSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMC 180
G +C VL LR+++ +KLNMVG F+ L+TL+LD+C+ L SL +DCF+CMP LM LSMC
Sbjct: 149 SHDGLACQVLKLRSSHFQKLNMVGGFLQLHTLNLDYCTHLTSLQKDCFACMPNLMRLSMC 208
Query: 181 ETRIVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRASLDAKNQASGADDRVKDNEDQ 240
ETR+ NLWTT+A +SK+P L+ELRFQ C CC++TGPC S S DD + ++
Sbjct: 209 ETRVANLWTTSAVLSKIPSLVELRFQTCPCCENTGPCPMS-------SNTDDSLTIDDVP 261
Query: 241 IVCKKFRDADEVELPKYLRTMNLMELSSCLS-PNLNGHAEMLDEVNDS-------NEFPG 292
+ + + ++ + L+ + L+ELSS + P H + EV+ S N
Sbjct: 262 SMDECLSNDCQITVSSELQRIGLLELSSDNALPVSKKHGHLQKEVSFSEMHVQHKNGSLL 321
Query: 293 GAHKQDLMDANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKS 352
DL DA + LK ISHHPSPICFEKHYR+YMIASLP L+VLDNL I ++DRE AK+
Sbjct: 322 SGLNWDLTDAAIALKYCISHHPSPICFEKHYRDYMIASLPLLQVLDNLLIRKMDREKAKT 381
Query: 353 VFARYFEHLPYKRKHKESVVSLLQKREMGTSGNYQNSS-KPKQPNIH-RTQHFFSRSLSA 410
+F++Y+E+LPYKR+ ESVV++LQKREMG+S + S KPKQP + ++ +FFSRSL A
Sbjct: 382 IFSKYYEYLPYKRQ-PESVVTVLQKREMGSSTIHDRKSLKPKQPTSYKKSPYFFSRSLCA 440
Query: 411 AKLGSSAWPLLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENG 470
KLG AWPLL+PVS+ S+ K+ +K++RPRQFEY+PSN SLM FGTLDGE++V NHE+G
Sbjct: 441 TKLG--AWPLLYPVSNISYTSKQESKQLRPRQFEYHPSNSSLMVFGTLDGEIVVFNHESG 498
Query: 471 NVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVAT 530
N+ Y PSIG NSVLGLCWLKK PSKL+AGSD+G + L+D+NH+PP +ADA +S + T
Sbjct: 499 NIVGYSPSIGAANSVLGLCWLKKCPSKLLAGSDNGSLNLYDINHMPPNIADAYCSSGIVT 558
Query: 531 YYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSP 590
Y FEQLTSVHVNSTDD FL SGYSK+VALYDI + K L+LF +MHREPINVAKFS+HSP
Sbjct: 559 YDRFEQLTSVHVNSTDDWFLVSGYSKHVALYDIGSGKRLKLFNNMHREPINVAKFSNHSP 618
>gi|296087358|emb|CBI33732.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/592 (56%), Positives = 427/592 (72%), Gaps = 38/592 (6%)
Query: 1 MAMDMSTLEARYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYP 60
MA+D+STL+ARYLDSC+R PNS+VLSWF +AKIQ ++EKCSI+V LD L+ AD P
Sbjct: 1 MAIDISTLDARYLDSCKRHGVVPNSAVLSWFYKAKIQKSSHEKCSIVVLLDHLRAADFSP 60
Query: 61 LIDVFTEMDSFDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDL 120
LIDVF E+DS +I+AVDIL + P L EEY++S++ I+ KLR+V+L +++ D DL
Sbjct: 61 LIDVFLEIDSSNIDAVDILHESPIILTEEYVLSMIRTINLKLRLVELRDVSFGKDFFRDL 120
Query: 121 CQVGSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMC 180
G +C VL LR+++ +KLNMVG F+ L+TL+LD+C+ L SL +DCF+CMP LM LSMC
Sbjct: 121 SHDGLACQVLKLRSSHFQKLNMVGGFLQLHTLNLDYCTHLTSLQKDCFACMPNLMRLSMC 180
Query: 181 ETRIVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRASLDAKNQASGADDRVKDNEDQ 240
ETR+ NLWTT+A +SK+P L+ELRFQ C CC++TGPC G + DN
Sbjct: 181 ETRVANLWTTSAVLSKIPSLVELRFQTCPCCENTGPC--------PIIGLLELSSDNALP 232
Query: 241 IVCKKFRDADEVELPKYLRTMNLMELSSCLSPNLNGHAEMLDEVNDSNEFPGGAHKQDLM 300
+ K EV + M++ + L LN DL
Sbjct: 233 VSKKHGHLQKEVSFSE----MHVQHKNGSLLSGLN---------------------WDLT 267
Query: 301 DANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEH 360
DA + LK ISHHPSPICFEKHYR+YMIASLP L+VLDNL I ++DRE AK++F++Y+E+
Sbjct: 268 DAAIALKYCISHHPSPICFEKHYRDYMIASLPLLQVLDNLLIRKMDREKAKTIFSKYYEY 327
Query: 361 LPYKRKHKESVVSLLQKREMGTSGNYQNSS-KPKQPNIHR-TQHFFSRSLSAAKLGSSAW 418
LPYKR+ ESVV++LQKREMG+S + S KPKQP ++ + +FFSRSL A KLG AW
Sbjct: 328 LPYKRQ-PESVVTVLQKREMGSSTIHDRKSLKPKQPTSYKKSPYFFSRSLCATKLG--AW 384
Query: 419 PLLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPS 478
PLL+PVS+ S+ K+ +K++RPRQFEY+PSN SLM FGTLDGE++V NHE+GN+ Y PS
Sbjct: 385 PLLYPVSNISYTSKQESKQLRPRQFEYHPSNSSLMVFGTLDGEIVVFNHESGNIVGYSPS 444
Query: 479 IGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLT 538
IG NSVLGLCWLKK PSKL+AGSD+G + L+D+NH+PP +ADA +S + TY FEQLT
Sbjct: 445 IGAANSVLGLCWLKKCPSKLLAGSDNGSLNLYDINHMPPNIADAYCSSGIVTYDRFEQLT 504
Query: 539 SVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSP 590
SVHVNSTDD FL SGYSK+VALYDI + K L+LF +MHREPINVAKFS+HSP
Sbjct: 505 SVHVNSTDDWFLVSGYSKHVALYDIGSGKRLKLFNNMHREPINVAKFSNHSP 556
>gi|296083092|emb|CBI22496.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 321/617 (52%), Positives = 431/617 (69%), Gaps = 39/617 (6%)
Query: 1 MAMDMSTLEARYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYP 60
MA+D+ TLE RY+DSCR+ PN+ VLS +AK++ N+E CS++V+LD++K+ D YP
Sbjct: 31 MAVDIPTLEERYVDSCRQHGAPPNTEVLSALLKAKVKRNNHEPCSMVVFLDRVKDIDFYP 90
Query: 61 LIDVFTEMDSFDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDL 120
L+D+ E+D+ +I+AVDI ++ C L EY +SLM AI+QKLR+VDL +++L D L DL
Sbjct: 91 LLDLLMEIDASEIDAVDIFNESSCVLNGEYALSLMRAINQKLRIVDLQDLSLGKDFLRDL 150
Query: 121 CQVGSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMC 180
Q G +C L LR+++ RKLN++G+FM ++TL+LDF +SL S EDCF+CMP L CLSMC
Sbjct: 151 SQRGLTCQALNLRSSHFRKLNLIGKFMQMHTLNLDFSTSLTSFREDCFTCMPNLRCLSMC 210
Query: 181 ETRIVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRASLDAKNQASGADDR------- 233
ETR+ NLWTT AA+SKLP L ELRFQ CLCC DTGPC S K A+DR
Sbjct: 211 ETRVSNLWTTIAALSKLPSLAELRFQNCLCCYDTGPCPVSSGGK-----ANDRTYSEFFL 265
Query: 234 ----VKDNEDQIVCKKFRDADEVELPKYLRTMNLMELSSCLSPNLNGHAEM--------L 281
+ + E Q + D EV+ + + L+EL LS ++ +E+
Sbjct: 266 HNNVIMNPEFQNTTEDSSDDSEVDFSTHQQEFGLVEL---LSNAVDLQSEVPFCTSWTQS 322
Query: 282 DEVNDSNEFPGGA--HKQDLMDANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDN 339
+EV+ + F + QD+M KY+SHHPSPICFEKHYREYMIASLP L VLDN
Sbjct: 323 EEVSLKDAFSSQSIPFLQDIM------LKYVSHHPSPICFEKHYREYMIASLPHLNVLDN 376
Query: 340 LPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSLLQKREMGTSGNYQNSSKPKQPNI-- 397
L I ++R+ A ++FA+YFE+LPY+R KE+VV +LQ RE+ N + K K+P+
Sbjct: 377 LLIKEIERDFASAIFAQYFEYLPYRRNRKENVVDILQMREIKAIHNRIQTPK-KKPSCPP 435
Query: 398 HRTQHFFSRSLSAAKLGSSAWPLLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGT 457
R+Q+F+SRSL AAK+GSS WPLLHP+S + G + RPRQFEY+PSN SLM FGT
Sbjct: 436 GRSQYFYSRSLGAAKVGSSPWPLLHPLSILGND-SGGERSFRPRQFEYHPSNSSLMVFGT 494
Query: 458 LDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPP 517
LDG+V+V+NHE+ + YIPS+G NSVLGLCWLKK+PSKL+AGSD+G ++L+D+ H+
Sbjct: 495 LDGDVVVVNHESEKIVSYIPSLGAMNSVLGLCWLKKHPSKLIAGSDNGSLKLYDIQHMSS 554
Query: 518 KVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHR 577
VAD ++ AT+ +F+QLTSVHVNSTD+ FLASGYSKNVALYDIN+ + LQ+FTDMH+
Sbjct: 555 TVADIYCSAGSATFDEFDQLTSVHVNSTDELFLASGYSKNVALYDINSGRRLQMFTDMHQ 614
Query: 578 EPINVAKFSHHSPLCLL 594
E INV KF++HSP +
Sbjct: 615 EHINVVKFANHSPFLFV 631
>gi|359475456|ref|XP_002269406.2| PREDICTED: uncharacterized protein LOC100267918 [Vitis vinifera]
Length = 794
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 319/622 (51%), Positives = 432/622 (69%), Gaps = 39/622 (6%)
Query: 1 MAMDMSTLEARYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYP 60
MA+D+ TLE RY+DSCR+ PN+ VLS +AK++ N+E CS++V+LD++K+ D YP
Sbjct: 1 MAVDIPTLEERYVDSCRQHGAPPNTEVLSALLKAKVKRNNHEPCSMVVFLDRVKDIDFYP 60
Query: 61 LIDVFTEMDSFDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDL 120
L+D+ E+D+ +I+AVDI ++ C L EY +SLM AI+QKLR+VDL +++L D L DL
Sbjct: 61 LLDLLMEIDASEIDAVDIFNESSCVLNGEYALSLMRAINQKLRIVDLQDLSLGKDFLRDL 120
Query: 121 CQVGSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMC 180
Q G +C L LR+++ RKLN++G+FM ++TL+LDF +SL S EDCF+CMP L CLSMC
Sbjct: 121 SQRGLTCQALNLRSSHFRKLNLIGKFMQMHTLNLDFSTSLTSFREDCFTCMPNLRCLSMC 180
Query: 181 ETRIVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRASLDAKN--------------- 225
ETR+ NLWTT AA+SKLP L ELRFQ CLCC DTGPC S K
Sbjct: 181 ETRVSNLWTTIAALSKLPSLAELRFQNCLCCYDTGPCPVSSGGKANDRTYSVQPQRGPLI 240
Query: 226 QASGADDRVKDNEDQIVCKKFRD-ADEVELPKYLRTMNLMELSSCLSPNLNGHAEM---- 280
+A D + N++ + F++ EV+ + + L+EL LS ++ +E+
Sbjct: 241 EAPSVDGWILGNQNSTAQEAFQEFFFEVDFSTHQQEFGLVEL---LSNAVDLQSEVPFCT 297
Query: 281 ----LDEVNDSNEFPGGA--HKQDLMDANVKLKKYISHHPSPICFEKHYREYMIASLPQL 334
+EV+ + F + QD+M KY+SHHPSPICFEKHYREYMIASLP L
Sbjct: 298 SWTQSEEVSLKDAFSSQSIPFLQDIM------LKYVSHHPSPICFEKHYREYMIASLPHL 351
Query: 335 EVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSLLQKREMGTSGNYQNSSKPKQ 394
VLDNL I ++R+ A ++FA+YFE+LPY+R KE+VV +LQ RE+ N + K K+
Sbjct: 352 NVLDNLLIKEIERDFASAIFAQYFEYLPYRRNRKENVVDILQMREIKAIHNRIQTPK-KK 410
Query: 395 PNI--HRTQHFFSRSLSAAKLGSSAWPLLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSL 452
P+ R+Q+F+SRSL AAK+GSS WPLLHP+S + G + RPRQFEY+PSN SL
Sbjct: 411 PSCPPGRSQYFYSRSLGAAKVGSSPWPLLHPLSILGND-SGGERSFRPRQFEYHPSNSSL 469
Query: 453 MAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
M FGTLDG+V+V+NHE+ + YIPS+G NSVLGLCWLKK+PSKL+AGSD+G ++L+D+
Sbjct: 470 MVFGTLDGDVVVVNHESEKIVSYIPSLGAMNSVLGLCWLKKHPSKLIAGSDNGSLKLYDI 529
Query: 513 NHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLF 572
H+ VAD ++ AT+ +F+QLTSVHVNSTD+ FLASGYSKNVALYDIN+ + LQ+F
Sbjct: 530 QHMSSTVADIYCSAGSATFDEFDQLTSVHVNSTDELFLASGYSKNVALYDINSGRRLQMF 589
Query: 573 TDMHREPINVAKFSHHSPLCLL 594
TDMH+E INV KF++HSP +
Sbjct: 590 TDMHQEHINVVKFANHSPFLFV 611
>gi|147861826|emb|CAN78929.1| hypothetical protein VITISV_026521 [Vitis vinifera]
Length = 806
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 321/643 (49%), Positives = 432/643 (67%), Gaps = 60/643 (9%)
Query: 1 MAMDMSTLEARYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYP 60
MA+D+ TLE RY+DSCR+ PN+ VLS +AK++ N+E CS++V+LD++K+ D YP
Sbjct: 1 MAVDIPTLEERYVDSCRQHGAPPNTEVLSALFKAKVKRNNHEPCSMVVFLDRVKDIDFYP 60
Query: 61 LIDVFTEMDSFDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDL 120
L+D+ E+D+ +I+AVDI ++ C L EY +SLM AI+QKLR+VDL +++L D L DL
Sbjct: 61 LLDLLMEIDASEIDAVDIFNESSCVLNGEYALSLMRAINQKLRIVDLQDLSLGKDFLRDL 120
Query: 121 CQVGSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMC 180
Q G +C L LR+++ RKLN++G+FM ++TL+LDF +SL S EDCF+CMP L CLSMC
Sbjct: 121 SQRGLTCQALNLRSSHFRKLNLIGKFMQMHTLNLDFSTSLTSFREDCFTCMPNLRCLSMC 180
Query: 181 ETRIVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRASLDAKN--------------- 225
ETR+ NLWTT AA+SKLP L ELRFQ CLCC DTGPC S K
Sbjct: 181 ETRVSNLWTTIAALSKLPSLAELRFQNCLCCYDTGPCPVSSGGKANDRTYSVQPQRGPLI 240
Query: 226 QASGADDRVKDNEDQIVCKKFR----------------------DADEVELPKYLRTMNL 263
+A D + N++ + F+ D EV+ + + L
Sbjct: 241 EAPSVDGWILGNQNSTAQEAFQEFFLHNNVIMNPEFQNTTEDSSDDSEVDFSTHQQEFGL 300
Query: 264 MELSSCLSPNLNGHAEM--------LDEVNDSNEFPGGAHK--QDLMDANVKLKKYISHH 313
+EL LS ++ +E+ +EV+ + F + QD+M KY+SHH
Sbjct: 301 VEL---LSNAVDLQSEVPFCTSWTQSEEVSLKDAFSSQSXPFLQDIM------LKYVSHH 351
Query: 314 PSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVS 373
PSPICFEKHYREYMIASLP L VLDNL I ++R+ A ++FA+YFE+LPY+R KE+VV
Sbjct: 352 PSPICFEKHYREYMIASLPHLNVLDNLLIKEIERDFASAIFAQYFEYLPYRRNRKENVVG 411
Query: 374 LLQKREMGTSGNYQNSSKPKQPNI--HRTQHFFSRSLSAAKLGSSAWPLLHPVSSFSHIY 431
+LQ RE+ N + K K+P+ R+Q+F+SRSL AAK+GSS WPLLHP+S +
Sbjct: 412 ILQMREIKAIHNRIQTPK-KKPSCPPGRSQYFYSRSLGAAKVGSSPWPLLHPLSILGND- 469
Query: 432 KEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWL 491
G + RPRQFEY+PSN SLM FGTLDG+V+V+NHE+ + YIPS+G NSVLGLCWL
Sbjct: 470 SGGERSFRPRQFEYHPSNSSLMVFGTLDGDVVVVNHESEKIVSYIPSLGAMNSVLGLCWL 529
Query: 492 KKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLA 551
KKYPSKL+AGSD+G ++L+D+ H+ VAD ++ AT+ +F+QLTSVHVNSTD+ FLA
Sbjct: 530 KKYPSKLIAGSDNGSLKLYDIQHMSSTVADIYCSAGSATFDEFDQLTSVHVNSTDELFLA 589
Query: 552 SGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLL 594
SGYSKNVALYDIN+ + LQ+FTDMH+E INV KF++HSP +
Sbjct: 590 SGYSKNVALYDINSGRRLQMFTDMHQEHINVVKFANHSPFLFV 632
>gi|356534295|ref|XP_003535692.1| PREDICTED: uncharacterized protein LOC100806443 [Glycine max]
Length = 804
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/624 (50%), Positives = 416/624 (66%), Gaps = 40/624 (6%)
Query: 1 MAMDMSTLEARYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYP 60
M +D+ TLE RY+DSCRR + PNSS+LS +A+++ N+E CS+ + +D LK+ADI P
Sbjct: 1 MVIDIETLEDRYIDSCRRHDVFPNSSILSSLFKAEVKKSNHELCSLEILIDDLKDADIAP 60
Query: 61 LIDVFTEMDSFDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDL 120
L D+ D+ +IEAVD+ ++ C L EY +SLM AI+QKLRVV L + + D L D+
Sbjct: 61 LFDLCMNFDASEIEAVDVRNESSCVLNGEYALSLMRAINQKLRVVHLQDPSFGKDFLRDI 120
Query: 121 CQVGSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMC 180
Q G +C VL LR + RKLN +G FMH++TL+LDF SSL S EDCF+CMP LM LSMC
Sbjct: 121 SQRGLACQVLTLRCSRFRKLNFMGEFMHIHTLNLDFSSSLTSFQEDCFNCMPNLMRLSMC 180
Query: 181 ETRIVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRASLDAKNQASGADDRVKDNEDQ 240
+TRI NLWTT AA+SKLP L+ELRFQ C D S K+ + AD + D+
Sbjct: 181 DTRITNLWTTVAALSKLPSLIELRFQYWQYCNDAVTSFISSSGKSDDT-ADFSLLDSV-P 238
Query: 241 IVCKKFRDADEVELPKYLRTMNLMELSSCLSPNLNGHAE-MLDEVNDSNE---------- 289
+ + + E+ P + L S +N + M+++ +D +E
Sbjct: 239 FIGEPYTYTTELTDPNFNAEDPLRNFYSFDEEVINHDVQSMVEDSSDDSEVDFTSRHHKY 298
Query: 290 -----FPGGAHKQDLM---------------DANVKLK-KYISHHPSPICFEKHYREYMI 328
FPG + + L D+N + KY+S H SPIC+EKHYRE+MI
Sbjct: 299 WLSDVFPGWSSEVPLQNENEDGEESLQAAFTDSNADVSMKYMSRHASPICYEKHYREFMI 358
Query: 329 ASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSLLQKREMGTSGNYQN 388
ASLP L+ LDN+PI ++D+E A +F++YFE+LPYK KHKESVVS+LQKRE+ + N
Sbjct: 359 ASLPNLKNLDNMPIRKIDKERATGIFSQYFEYLPYKWKHKESVVSILQKREIKSVHNKVQ 418
Query: 389 SSKPK--QPNIHRTQHFFSRSLSAAKLGSSAWPLLHPVSSFSHIYKEGNKRVRPRQFEYN 446
SSK + P+ ++Q+F+SRSLSAAKLGSS WP+LHP+ S + E +K PRQFEY+
Sbjct: 419 SSKHRLSYPS-GKSQYFYSRSLSAAKLGSSTWPILHPL---SFVGCELDKGFHPRQFEYH 474
Query: 447 PSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGC 506
PS+ SLM FGTLDGEV+VINHE ++ YIPS+G NSVLGLCWLKKYPSKL+AGSD+G
Sbjct: 475 PSDSSLMVFGTLDGEVVVINHETEHILSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGS 534
Query: 507 VRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTE 566
++L+D+ HIP KV GN T+ +F+QLTSVHVNS D+ FLASGYS+NVALYDIN+
Sbjct: 535 LKLYDIYHIPRKVTGLHGNFGCVTFDEFDQLTSVHVNSMDELFLASGYSRNVALYDINSG 594
Query: 567 KPLQLFTDMHREPINVAKFSHHSP 590
K LQ+FTDMHR INV KF++HSP
Sbjct: 595 KRLQVFTDMHRGHINVVKFANHSP 618
>gi|356574293|ref|XP_003555283.1| PREDICTED: uncharacterized protein LOC100811988 [Glycine max]
Length = 787
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 310/614 (50%), Positives = 415/614 (67%), Gaps = 39/614 (6%)
Query: 1 MAMDMSTLEARYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYP 60
M +D+ +LE RY+D CRR + PNSS+LS +A+++ N+E CS+ + +D LK+ DI P
Sbjct: 1 MVIDIESLEDRYIDFCRRHDVLPNSSILSSLFKAEVKKSNHEPCSMEILIDDLKDVDIAP 60
Query: 61 LIDVFTEMDSFDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDL 120
L+D+ +D+ +IEAVD+ ++ L EY +SLM AI+QKLRVV L + + D L D+
Sbjct: 61 LLDLCMNLDTSEIEAVDVRNESSSVLNGEYALSLMRAINQKLRVVHLQDSSFGKDFLRDI 120
Query: 121 CQVGSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMC 180
Q G +C VL LR + RKLN++G FMH++TL+LDF SSL S EDCF+CMP LM LSMC
Sbjct: 121 SQRGLACQVLTLRCSRFRKLNLMGEFMHIHTLNLDFSSSLTSFQEDCFNCMPNLMRLSMC 180
Query: 181 ETRIVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRASLDAKNQASGADDRVKD---- 236
+T+I NLWTT AA+SKLP L+ELRFQ C D ++ + +SG D D
Sbjct: 181 DTQITNLWTTVAALSKLPSLIELRFQYLQYCND------AVTSFIPSSGKSDDTADFSPL 234
Query: 237 NEDQIVCKKFRDADEVELPKY-----LRTMNLMELSSCLSPNLNGHAE--------MLDE 283
+ + + D E+ P + LR + ++P++ E + +E
Sbjct: 235 DSVPFIGEPHTDTTELTDPNFNAEDPLRNFYSFD-EEVINPDVQSMVEDSSDDKVPLQNE 293
Query: 284 V------NDSNEFPGGAHKQDLMDANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVL 337
V D E GA + D ++ KY+S H SPIC+EKHYRE+MIASLP L+ L
Sbjct: 294 VWFTLQNEDGEESLQGAFTDRIADVSM---KYMSCHASPICYEKHYREFMIASLPNLKNL 350
Query: 338 DNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSLLQKREMGTSGNYQNSSK--PKQP 395
DN+PI ++D+E A +F++YFE+LPYK KHKESVVS+LQKRE+ + N SSK P P
Sbjct: 351 DNMPIRKIDKERATRIFSQYFEYLPYKWKHKESVVSILQKREIKSGHNKVQSSKHRPSYP 410
Query: 396 NIHRTQHFFSRSLSAAKLGSSAWPLLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAF 455
+ ++Q+F++RSLSAAKLGSS WP+LHP+S + E +K PRQFEY+PS+ SLM F
Sbjct: 411 S-GKSQYFYTRSLSAAKLGSSTWPILHPLSL---VGCELDKGFHPRQFEYHPSDSSLMVF 466
Query: 456 GTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHI 515
GTLDGEV+VINHE ++ YIPS+G NSVLGLCWLKKYPSKL+AGSD+G ++L+D++HI
Sbjct: 467 GTLDGEVVVINHETEHIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIHHI 526
Query: 516 PPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDM 575
P KV GN T+ +F+QLTSVHVNSTD+ FLASGYSKNVALYDIN+ K LQ+FTDM
Sbjct: 527 PRKVTGIHGNFGCVTFDEFDQLTSVHVNSTDELFLASGYSKNVALYDINSGKRLQVFTDM 586
Query: 576 HREPINVAKFSHHS 589
HR INV KF++HS
Sbjct: 587 HRGHINVVKFANHS 600
>gi|224105657|ref|XP_002313890.1| predicted protein [Populus trichocarpa]
gi|222850298|gb|EEE87845.1| predicted protein [Populus trichocarpa]
Length = 783
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 301/603 (49%), Positives = 397/603 (65%), Gaps = 29/603 (4%)
Query: 11 RYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYPLIDVFTEMDS 70
RY+DSC+RR+ PN+ +LS F +A+++ NE CS+ + LD LK+ D+ PL+DV +++
Sbjct: 1 RYIDSCKRRDVLPNTEILSGFFKAEVKKSCNELCSLEIILDHLKDIDVPPLLDVCATIET 60
Query: 71 FDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDLCQVGSSCHVL 130
+IEAVDI + C L E +SLM A +QKLR VDL + D L +L Q G +C +L
Sbjct: 61 SEIEAVDIRNGPSCSLNGECALSLMRAFNQKLRAVDLQDSPFGKDFLRELSQRGLACQIL 120
Query: 131 ILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMCETRIVNLWTT 190
LR+++ RKLNM G+FM ++TL+LDF +SL S EDCF+CMP L+CLSMCETR+ NLWTT
Sbjct: 121 NLRSSHFRKLNMAGKFMQIHTLNLDFSTSLTSFLEDCFTCMPNLICLSMCETRVANLWTT 180
Query: 191 TAAISKLPYLMELRFQMCLCCK----------------DTGPCRASLDAKNQASGADDRV 234
+A+SKL L+ELRFQ LC D G + D Q + ++
Sbjct: 181 ISALSKLSCLVELRFQKWLCNDSASPSASSGGNLEDQPDVGLPISCTDIGEQLTDIEEET 240
Query: 235 KDNEDQIVCKKFRDADEVELPKYLRTMNLMELSSCLSPNLNGHAEMLDEV------NDSN 288
N + FR+ EV+ R +L + S N + +EV N
Sbjct: 241 YLNPG--TDEAFRNF-EVDFSSNWREFGYTDLLANFSSGWNRQVNLQNEVSSGASLNQKE 297
Query: 289 EFPGGAHKQDLMDANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDRE 348
E G+ + + D +K YI H SPICFEKHYREYMIASLP L+VLDNLP+ ++DRE
Sbjct: 298 ESLTGSFGRHIADVPLK---YIPRHASPICFEKHYREYMIASLPNLKVLDNLPVRKIDRE 354
Query: 349 IAKSVFARYFEHLPYKRKHKESVVSLLQKREMGTSGNYQNSSKPKQPNIH-RTQHFFSRS 407
A F++YFE+LPY RKHKESVVS+L KRE+ + ++ S K H +Q+F++RS
Sbjct: 355 RAAVTFSQYFEYLPYNRKHKESVVSILHKREIKETRSHIQSKNQKLSYSHGNSQYFYTRS 414
Query: 408 LSAAKLGSSAWPLLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINH 467
L AAK+GSSAWP LH +S +G++ RPRQFEY+PS SLM FGTLDGEV+V+NH
Sbjct: 415 LGAAKVGSSAWPFLHSLSVSGCDLGDGSRSFRPRQFEYHPSLSSLMVFGTLDGEVVVVNH 474
Query: 468 ENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSS 527
ENG V Y+PS+G NSVLGLCWLKKYPSKL+AGSD+G ++L+D+ H+PP V +
Sbjct: 475 ENGKVVRYVPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIEHLPPTVTGRYLGAG 534
Query: 528 VATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSH 587
T+ DF+QLTSVH+NSTD+ FLASGYSKNVALYDIN + +Q+FTDMHRE INV KFS+
Sbjct: 535 SITFDDFDQLTSVHINSTDELFLASGYSKNVALYDINYGRRIQVFTDMHREHINVVKFSN 594
Query: 588 HSP 590
HSP
Sbjct: 595 HSP 597
>gi|224060678|ref|XP_002300252.1| predicted protein [Populus trichocarpa]
gi|222847510|gb|EEE85057.1| predicted protein [Populus trichocarpa]
Length = 817
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 303/628 (48%), Positives = 403/628 (64%), Gaps = 42/628 (6%)
Query: 2 AMDMSTLEARYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYPL 61
+ ++STLE Y+DSC+R PN+ +LS F +A+++ NE CS+ + LD L++ D+ PL
Sbjct: 7 SFNISTLEQMYIDSCKRHGVLPNTEILSGFLKAEVKKSCNEICSLEIILDHLEDIDVPPL 66
Query: 62 IDVFTEMDSFDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLL--- 118
+DV +++ +IE VDI + C L EY +SLM A +QKL+VVDL ++ D L
Sbjct: 67 LDVCATIETSEIEVVDIRNGPNCTLHVEYALSLMRAFNQKLQVVDLQDLPFGKDFLRFIL 126
Query: 119 -DLCQVGSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCL 177
+L Q G +C +L LR+++ R LNM G+FM ++TL+LDF +SL S EDCF+CMP L CL
Sbjct: 127 RELSQKGLACQILNLRSSHFRNLNMAGKFMQIHTLNLDFSTSLTSFQEDCFTCMPILTCL 186
Query: 178 SMCETRIVNLWTTTAAISKLPYLMELRFQMCLCCKDTG--------------PCRASLDA 223
SMCETR+ NLWTT AA+SKL L+ELRFQ +CC D+ R L
Sbjct: 187 SMCETRVANLWTTIAALSKLSSLVELRFQKWICCNDSASPSASSGGNLEDQPDVRELLTD 246
Query: 224 KNQAS----GAD----------DRVKDNEDQIVCKKFRDADEVELPKYLRTMNLMELSSC 269
++ S G D D + Q + + D +EV+ Y + + M+L +
Sbjct: 247 IDEESFLNQGTDEGTGNVFSFNDIATGQQVQSMMEDSSDDNEVDFSSYWQEFDYMDLLAN 306
Query: 270 LSPNLNGHAEMLDEV------NDSNEFPGGAHKQDLMDANVKLKKYISHHPSPICFEKHY 323
S N + E+ N E G+ + + D KYISHH SPICFEKHY
Sbjct: 307 FSSGWNRQVNLQSELSSGTSRNKKEESLHGSFGRHVADVP---SKYISHHASPICFEKHY 363
Query: 324 REYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSLLQKREMGTS 383
REYMIASLP L+VLDNLP+ ++D E A F++YFE+LPY RKHKESVVS+L KRE+ +
Sbjct: 364 REYMIASLPNLKVLDNLPVRKIDSERAAVTFSQYFEYLPYNRKHKESVVSILHKREIKDT 423
Query: 384 GNYQNSSKPKQPNIHRTQHF-FSRSLSAAKLGSSAWPLLHPVSSFSHIYKEGNKRVRPRQ 442
++ S K H + ++RSL AAKLGSSAWPLLH +S +G++ RPRQ
Sbjct: 424 RSHMLSKNQKPSYSHGNSLYSYTRSLCAAKLGSSAWPLLHSLSVSGCDLGDGSRSFRPRQ 483
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
FEY+PS SLM FGTLDGEV+V+NHEN V Y+ S+G NSVLGLCWLKKYPSK +AGS
Sbjct: 484 FEYHPSLSSLMVFGTLDGEVVVVNHENEKVVRYVSSLGAMNSVLGLCWLKKYPSKFIAGS 543
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYD 562
DSG ++L+D+ H+PP V + T+ DF+QLTSVHVNSTD+ FLASGYSKNVALYD
Sbjct: 544 DSGLLKLYDIEHMPPTVTGMYSAAGSITFDDFDQLTSVHVNSTDELFLASGYSKNVALYD 603
Query: 563 INTEKPLQLFTDMHREPINVAKFSHHSP 590
IN+ + +Q+FTD+HRE INV KFS+HSP
Sbjct: 604 INSGRRIQVFTDVHREHINVVKFSNHSP 631
>gi|255555221|ref|XP_002518647.1| nucleotide binding protein, putative [Ricinus communis]
gi|223542028|gb|EEF43572.1| nucleotide binding protein, putative [Ricinus communis]
Length = 794
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 301/613 (49%), Positives = 403/613 (65%), Gaps = 28/613 (4%)
Query: 1 MAMDMSTLEARYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYP 60
MA+D+ TL+ Y++SC R PN+SVLS F EA+++ NE ++ ++LDQLK+ D P
Sbjct: 1 MAIDILTLQNLYIESCGRHGVLPNTSVLSGFFEAEVKKSCNELRNLEIFLDQLKDFDFLP 60
Query: 61 LIDVFTEMDSFDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDL 120
L+DV +++ +IEA+DI + L EY ++L+ A +QKLR+VDL + D L +L
Sbjct: 61 LLDVCKSIETSEIEAIDIHNGSSSVLNGEYALALIRAFNQKLRIVDLQDSLYEKDFLREL 120
Query: 121 CQVGSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMC 180
Q G SC VL LR++ +R LN+ G FM ++TL+LDF +SL S EDCF+CMP L+CLSMC
Sbjct: 121 SQGGLSCQVLNLRSSRLRNLNLSGEFMRIHTLNLDFNTSLTSFWEDCFACMPNLICLSMC 180
Query: 181 ETRIVNLWTTTAAISKLPYLMELRFQMCLCCKDTG------------PCRASL---DAKN 225
TR+ NLWTT AA+SKL L+EL FQ LCC +TG C S + N
Sbjct: 181 ATRVANLWTTVAALSKLSSLVELSFQKWLCCNETGSSSAPSSGKSDEQCEFSQLNSFSNN 240
Query: 226 QASGADDRVKDNEDQIVCKKFRDADEVELPKYLRTMNLMELSSCLSPNLNGHAEMLDEV- 284
+A D + + + FR+ E++ Y M+ S +S N A + DEV
Sbjct: 241 EAPSIDIGENTDPNLSTEEAFRNI-EMDFSSYWEEHGYMDSLSSVSLGSNRQANLQDEVS 299
Query: 285 -----NDSNEFPGGAHKQDLMDANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDN 339
N ++E GA +D+ D + YIS H SP+C+EKHYREYMIAS+P L+ LDN
Sbjct: 300 FGNMCNKNDESMPGALTRDIADVALT---YISSHASPVCYEKHYREYMIASMPHLKTLDN 356
Query: 340 LPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSLLQKREMGTSGN--YQNSSKPKQPNI 397
LPI ++DRE A F++YFE+LPYKRK+KESVVS+LQKRE+ S + + KP P
Sbjct: 357 LPIRKIDREKAAVTFSQYFEYLPYKRKYKESVVSILQKREIKESRSCLRTENHKPSYP-C 415
Query: 398 HRTQHFFSRSLSAAKLGSSAWPLLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGT 457
+Q+F++RS AAK+GSSAWP LH +S G + RPRQFEY+PS SL FGT
Sbjct: 416 RNSQYFYTRSFCAAKVGSSAWPFLHSLSVSKCDLGGGRRCFRPRQFEYHPSISSLFVFGT 475
Query: 458 LDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPP 517
LDGEV+V+NHEN + Y+PS+G NSVLGLCWLKKYPSKL+AGSD+G + L+D+ H+PP
Sbjct: 476 LDGEVVVVNHENEKLVNYVPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLNLYDVEHMPP 535
Query: 518 KVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHR 577
V+ + T+ DF+QLTSVHVN+TD+ FLASGYS+NVALYDI + +Q+FTDMHR
Sbjct: 536 TVSGMYTGAGSVTFDDFDQLTSVHVNATDELFLASGYSRNVALYDIQCGRQIQMFTDMHR 595
Query: 578 EPINVAKFSHHSP 590
E INV KFS+HSP
Sbjct: 596 EHINVVKFSNHSP 608
>gi|255567967|ref|XP_002524961.1| hypothetical protein RCOM_1155090 [Ricinus communis]
gi|223535796|gb|EEF37458.1| hypothetical protein RCOM_1155090 [Ricinus communis]
Length = 686
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 284/485 (58%), Positives = 362/485 (74%), Gaps = 20/485 (4%)
Query: 110 ITLRNDNLLDLCQVGSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFS 169
+ L D DLC G +C VL LR+T I+KLNM GRFM L+TL+L+FC+S+ SLH DCFS
Sbjct: 3 VKLLFDEGQDLCHHGLACEVLYLRSTKIQKLNMAGRFMRLHTLNLEFCTSITSLHRDCFS 62
Query: 170 CMPYLMCLSMCETRIVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRASLDAKNQASG 229
CMP LM LSMC TR+V+LWTTTAA+SKLP L+ELRFQ CLCC DT PC A++ N+A
Sbjct: 63 CMPNLMRLSMCATRVVDLWTTTAALSKLPSLLELRFQNCLCCTDTRPC-ANIFVINEACE 121
Query: 230 ADDRVKDNEDQIVCKKFRDADEVELPKYLRTMNLMELSSCLSPNLNGHAEMLDEVNDSNE 289
D++ + K A E ++ ++L+ M+L+ELSS + L+ E DSN
Sbjct: 122 GSDKL-----SVATDKLSVASEAKISRFLQKMDLLELSSNVLSTLDVQIE------DSNN 170
Query: 290 FPGGAHKQDLMDANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREI 349
F QDL + K Y SHHPSPICFEKHYREY+IASLP LEVLDNLP+ ++D+E+
Sbjct: 171 FLPSGCTQDLKNC----KNYSSHHPSPICFEKHYREYIIASLPHLEVLDNLPVEKMDKEM 226
Query: 350 AKSVFARYFEHLPYKRKHKESVVSLLQKREMGT-SGNYQNSSKPKQ--PNIHRTQHFFSR 406
A+ + + ++E+LPY R +KESV ++L+KRE+G S N SKP+Q P+ ++Q FFSR
Sbjct: 227 ARIIISTHYEYLPYNRCYKESVSNILRKREIGAGSACCPNFSKPRQQYPD-GKSQIFFSR 285
Query: 407 SLSAAKLGSSAWPLLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVIN 466
SLS+AKLGS+ WPLL P+S+ SHI KEGNKR+RPRQFEY+P + SLM FGTLDG+V+VIN
Sbjct: 286 SLSSAKLGSATWPLLDPLSNLSHINKEGNKRLRPRQFEYHPCDSSLMVFGTLDGDVVVIN 345
Query: 467 HENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNS 526
HENG + Y+PS G NS+LGLCWLK YPSKL+AGSD+GC++LFD++H+PPKVA +
Sbjct: 346 HENGKIVGYVPSTGAMNSILGLCWLKMYPSKLLAGSDNGCLKLFDISHMPPKVAAVNCTT 405
Query: 527 SVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFS 586
V T+ DFE LTSVHVNSTDD+F+ASGYSK+VALYDIN + +QLF +MHREPINVAKF+
Sbjct: 406 GVVTFDDFEPLTSVHVNSTDDKFVASGYSKDVALYDINNRRRIQLFPNMHREPINVAKFA 465
Query: 587 HHSPL 591
HHSP
Sbjct: 466 HHSPF 470
>gi|297802550|ref|XP_002869159.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297314995|gb|EFH45418.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
Length = 785
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 260/613 (42%), Positives = 379/613 (61%), Gaps = 44/613 (7%)
Query: 4 DMSTLEARYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYPLID 63
+++TLE +Y++ C++ PN++VLS F EA+++ N++C + +Y+D++K D +PL++
Sbjct: 6 EIATLEEKYIELCKKHGILPNTAVLSAFFEAEVKKSRNQRCIMNLYVDRVKYDDYHPLLE 65
Query: 64 VFTEMDSFDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDLCQV 123
+ E+++ +++ +D+ + C L++ Y +SL+ +++QKLRVV L + + + D+
Sbjct: 66 LCNEINTSEVQGIDLFVRSSCSLEDHYALSLIRSVNQKLRVVHLHD-SFGKNFWRDVFFQ 124
Query: 124 GSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMCETR 183
G SC V +R+ + KLN+VG F L+TL LD + + EDCFSCMP L LSMC+T
Sbjct: 125 GLSCKVFNVRSMHFHKLNIVGEFTQLHTLILD-KNRIVGFGEDCFSCMPKLTYLSMCDTL 183
Query: 184 IVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRASLDAKNQASGADDRVKDNEDQIVC 243
+ +LWT+ AA+ KLP L ELRFQ+ + C D+ P ++ + ++G D D V
Sbjct: 184 VSDLWTSAAALLKLPSLKELRFQIWISCSDSSPPKSQSSPSSSSTGDDKNTFIESDPPVE 243
Query: 244 KKFRDADE---VELP--KYLRTMNL---------MELSSCLSPNLNGHAEMLDEVNDSNE 289
+ D E + LP + L +M+ ++ +S LNG ++V +
Sbjct: 244 EDIWDVVEQMDLSLPVEETLHSMDFSYKIPEQDDLDSRISVSSELNGEVLTREKVR-RGK 302
Query: 290 FPGGAHKQDLMDA------NVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIG 343
P +++ NV LK YIS SPIC EKHYR YMI SLP+L+VLDNL I
Sbjct: 303 MPYRPKDVSPVESFTRQFGNVGLK-YISSKASPICSEKHYRMYMINSLPKLQVLDNLAIR 361
Query: 344 RLDREIAKSVFARYFEHLPYKRKHKESVVSLLQKREMGTS-GNYQNSSKPKQPNIHRTQH 402
+ DR+ A ++ FE LPYKRK KESVV +L+KRE +S G QNS K
Sbjct: 362 KSDRDRAFETYSANFEDLPYKRK-KESVVRVLEKRETRSSKGISQNSYK----------- 409
Query: 403 FFSRSLSAAKLGSSAWPLLHPVSSFS-HIYKEG-NKRVRPRQFEYNPSNPSLMAFGTLDG 460
RSL AAK+GSSA PLLH + S I++E N R+ PRQFEY+P +PSLM FGTLDG
Sbjct: 410 ---RSLCAAKMGSSASPLLHSLPFLSSRIHQEDDNSRLSPRQFEYHPLDPSLMVFGTLDG 466
Query: 461 EVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVA 520
EV+V+NHE+G + YIPS G +++LGLCWLK YPS ++AGS +G ++L+D+ V
Sbjct: 467 EVVVLNHESGKIVRYIPSHGSQSTILGLCWLKMYPSMVIAGSANGSLKLYDIQKASSTVT 526
Query: 521 DAR--GNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHRE 578
+ +S T+ +F+QLTSVH NSTD FLASGYS++VALYDI LQ+F +MH+E
Sbjct: 527 TSSHATSSGSVTFDEFDQLTSVHANSTDQLFLASGYSRDVALYDIGRGTCLQVFANMHQE 586
Query: 579 PINVAKFSHHSPL 591
INV KFS+HSP
Sbjct: 587 HINVVKFSNHSPF 599
>gi|30689988|ref|NP_195154.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|26449713|dbj|BAC41980.1| unknown protein [Arabidopsis thaliana]
gi|29029034|gb|AAO64896.1| At4g34280 [Arabidopsis thaliana]
gi|332660954|gb|AEE86354.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
Length = 783
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 254/610 (41%), Positives = 377/610 (61%), Gaps = 40/610 (6%)
Query: 4 DMSTLEARYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYPLID 63
+++TLE +Y++ C+ PN+++LS F EA+++ N++C + +Y+D++K D PL++
Sbjct: 6 EIATLEEKYIELCKMHGILPNTAILSAFFEAEVKKSRNQRCIMNLYVDRVKYDDYLPLLE 65
Query: 64 VFTEMDSFDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDLCQV 123
+ E+++ +++ +D+ + C L++ Y + L+ +++QKLRVV L + + + D+
Sbjct: 66 LCNEINTSEVQGIDLFVRSACSLEDHYALPLIRSVNQKLRVVHLHD-SFGKNFWQDVFFQ 124
Query: 124 GSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMCETR 183
G SC VL +R+ +I KLN+VG F L+TL LD + + EDCFSCMP L LSMC+T
Sbjct: 125 GLSCKVLNVRSMHIHKLNIVGEFTQLHTLILD-KNRIVGFGEDCFSCMPKLTYLSMCDTL 183
Query: 184 IVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRASLDAKNQASGADDRVKDNEDQIVC 243
+ +LWT+ AA+ KLP L ELRFQ+ + C D+ P + + + +++ +
Sbjct: 184 VSDLWTSAAALLKLPSLKELRFQIWISCSDSSPLNSESSPSSSTKDDINTFIESDPPVEA 243
Query: 244 KKFRDADEVE--LP--KYLRTMNL---------MELSSCLSPNLNGHAEMLDEVNDSNEF 290
+ A++++ LP + L +M+ ++ +S LNG M ++V +
Sbjct: 244 DMWDVAEQMDPSLPVEETLHSMDFSYKIPEQDDLDSHVSVSAGLNGEVLMREKVR-RGKM 302
Query: 291 PGGAHKQDLMD------ANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGR 344
P +D NV LK YIS SPIC EKHYR YMI SLP+L+VLDNL I +
Sbjct: 303 PYQPKDVSPVDTFTRQFGNVGLK-YISSKASPICSEKHYRMYMINSLPKLQVLDNLAIRK 361
Query: 345 LDREIAKSVFARYFEHLPYKRKHKESVVSLLQKREMGTSGNYQNSSKPKQPNIHRTQHFF 404
DR+ A ++ FE LPYKRK KESVV +L+ RE + SSK K +Q+ +
Sbjct: 362 SDRDKAIETYSANFEDLPYKRK-KESVVRVLENRE-------KRSSKGK------SQNSY 407
Query: 405 SRSLSAAKLGSSAWPLLH--PVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEV 462
RSL AAK+GS A PLLH P S ++ N R+ PRQFEY+P +PSLM FGTLDGEV
Sbjct: 408 KRSLCAAKMGSPASPLLHSLPFLSSRIQQEDDNSRLCPRQFEYHPLDPSLMVFGTLDGEV 467
Query: 463 IVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADA 522
+V+NHE+G + YIPS G +++LGLCWLK YPS ++AGS +G ++L+D+ V +
Sbjct: 468 VVLNHESGKIFRYIPSNGSQSTILGLCWLKIYPSMVIAGSANGSLKLYDIQKASSTVTTS 527
Query: 523 RGNSSVATYYD-FEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPIN 581
++S + +D F+QLTSVH NSTD FLASGYSK+VALYDI LQ+F +MH+E IN
Sbjct: 528 SHSTSGSVTFDEFDQLTSVHANSTDQLFLASGYSKDVALYDIGRGTRLQVFANMHQEHIN 587
Query: 582 VAKFSHHSPL 591
V KFS+HSP
Sbjct: 588 VVKFSNHSPF 597
>gi|168005133|ref|XP_001755265.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693393|gb|EDQ79745.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 798
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/607 (39%), Positives = 359/607 (59%), Gaps = 48/607 (7%)
Query: 11 RYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYPLIDVFTEMDS 70
RY+ +C R T P+SS+LS F + + Q+ ++ ++ + LDQ+ N DI PL+++ + +++
Sbjct: 1 RYVSACERYGTSPHSSILSVFDKVRNQHTKEDR-TLTIPLDQIPNNDIEPLMEMLSAVET 59
Query: 71 FDIEAVDIL-SKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDLCQVGSSCHV 129
D++A+DI+ S L+ ++ +M A KLR DL + + + +L G +C
Sbjct: 60 SDLDAIDIVYSNSVSNLRWSRVVHVMRAAGSKLRNADLRDNVFGREAVRELFHGGINCQS 119
Query: 130 LILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMCETRIVNLWT 189
+ + + IRK+ M G F +L+TL+LD+C S+ L E CF MP L LSMC T ++NLWT
Sbjct: 120 MDVSFSRIRKMEMSGHFPNLHTLNLDYCFSVTCLPEGCFGAMPKLAKLSMCGTSVMNLWT 179
Query: 190 TTAAISKLPYLMELRFQMCLCCKDTG-PCRA-SLDAKNQASGADDRVKDNEDQIVCKKFR 247
T+ A+ KL L ELRFQ CLCC+ T P A L A NQ + +D V+D +
Sbjct: 180 TSVALRKLVALRELRFQKCLCCQGTELPLVAEQLVASNQEAHEEDHVRDG----ISDLLD 235
Query: 248 DADEVELPKYLRTMNLMELSSCLSPNL------NGHAEMLDEV------NDSNEFPGGAH 295
D LP + ++ +S L + ML+ + G A
Sbjct: 236 LVDSCTLPDSRAPFGGILSNTSISEGLCQLETDDAEISMLEALERVVARKTHLSIRGSAS 295
Query: 296 KQDLMDANVKLKK--------YISHHP-SPICFEKHYREYMIASLPQLEVLDNLPIGRLD 346
+ + + + L++ + P SPIC+EK+YRE++I LP L+VLDN+ I +
Sbjct: 296 QIEESNQEITLRRSEGSGSNAWPGARPASPICYEKNYREFLINMLPGLQVLDNMAITENE 355
Query: 347 REIAKSVFARYFEHLPYKRKHKESVVSLLQKREMGTSGNYQNSSKPK--QPNIHRTQHFF 404
RE A+ V+ + FE + R+ E+++ +L KPK N R+ +
Sbjct: 356 REKARYVYEQRFEPVANNRRVMENLLQVL---------------KPKLIHVNNERSSDAY 400
Query: 405 SRSLSAAKLGSSAWPLLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIV 464
+RSLSAAKLGS+AWP + + F +G +R RPRQFEY+P+ PS M FGTL GEV+V
Sbjct: 401 TRSLSAAKLGSNAWPTMKTICRFKKPSLDGGRRCRPRQFEYHPTEPSYMVFGTLQGEVVV 460
Query: 465 INHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHI-PPKVADAR 523
INHE+ V Y+ SIG +S+LGLCWL K P+KL+AGSD+GC++L+D+NH+ ++++ R
Sbjct: 461 INHESDKVVGYVQSIGAPHSILGLCWLNKDPNKLIAGSDNGCIQLYDVNHMRASEISNGR 520
Query: 524 GNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVA 583
+ ++ TY DFEQLTSVH+NS+DD F+ASGYS +V LYD+ T +Q+F D+H+E INV
Sbjct: 521 -SPTIYTYDDFEQLTSVHINSSDDYFVASGYSNHVGLYDLRTGTRMQIFRDLHKEHINVV 579
Query: 584 KFSHHSP 590
KF++HSP
Sbjct: 580 KFANHSP 586
>gi|4455173|emb|CAB36705.1| putative protein [Arabidopsis thaliana]
gi|7270378|emb|CAB80145.1| putative protein [Arabidopsis thaliana]
Length = 748
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 240/566 (42%), Positives = 347/566 (61%), Gaps = 40/566 (7%)
Query: 48 VYLDQLKNADIYPLIDVFTEMDSFDIEAVDILSKRPCFLKEEYIMSLMHAIDQKLRVVDL 107
+Y+D++K D PL+++ E+++ +++ +D+ + C L++ Y + L+ +++QKLRVV L
Sbjct: 3 LYVDRVKYDDYLPLLELCNEINTSEVQGIDLFVRSACSLEDHYALPLIRSVNQKLRVVHL 62
Query: 108 SNITLRNDNLLDLCQVGSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDC 167
+ + + D+ G SC VL +R+ +I KLN+VG F L+TL LD + + EDC
Sbjct: 63 HD-SFGKNFWQDVFFQGLSCKVLNVRSMHIHKLNIVGEFTQLHTLILD-KNRIVGFGEDC 120
Query: 168 FSCMPYLMCLSMCETRIVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRASLDAKNQA 227
FSCMP L LSMC+T + +LWT+ AA+ KLP L ELRFQ+ + C D+ P + +
Sbjct: 121 FSCMPKLTYLSMCDTLVSDLWTSAAALLKLPSLKELRFQIWISCSDSSPLNSESSPSSST 180
Query: 228 SGADDRVKDNEDQIVCKKFRDADEVE--LP--KYLRTMNL---------MELSSCLSPNL 274
+ +++ + + A++++ LP + L +M+ ++ +S L
Sbjct: 181 KDDINTFIESDPPVEADMWDVAEQMDPSLPVEETLHSMDFSYKIPEQDDLDSHVSVSAGL 240
Query: 275 NGHAEMLDEVNDSNEFPGGAHKQDLMD------ANVKLKKYISHHPSPICFEKHYREYMI 328
NG M ++V + P +D NV LK YIS SPIC EKHYR YMI
Sbjct: 241 NGEVLMREKVR-RGKMPYQPKDVSPVDTFTRQFGNVGLK-YISSKASPICSEKHYRMYMI 298
Query: 329 ASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSLLQKREMGTSGNYQN 388
SLP+L+VLDNL I + DR+ A ++ FE LPYKRK KESVV +L+ RE +
Sbjct: 299 NSLPKLQVLDNLAIRKSDRDKAIETYSANFEDLPYKRK-KESVVRVLENRE-------KR 350
Query: 389 SSKPKQPNIHRTQHFFSRSLSAAKLGSSAWPLLH--PVSSFSHIYKEGNKRVRPRQFEYN 446
SSK K +Q+ + RSL AAK+GS A PLLH P S ++ N R+ PRQFEY+
Sbjct: 351 SSKGK------SQNSYKRSLCAAKMGSPASPLLHSLPFLSSRIQQEDDNSRLCPRQFEYH 404
Query: 447 PSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGC 506
P +PSLM FGTLDGEV+V+NHE+G + YIPS G +++LGLCWLK YPS ++AGS +G
Sbjct: 405 PLDPSLMVFGTLDGEVVVLNHESGKIFRYIPSNGSQSTILGLCWLKIYPSMVIAGSANGS 464
Query: 507 VRLFDLNHIPPKVADARGNSSVATYYD-FEQLTSVHVNSTDDQFLASGYSKNVALYDINT 565
++L+D+ V + ++S + +D F+QLTSVH NSTD FLASGYSK+VALYDI
Sbjct: 465 LKLYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGYSKDVALYDIGR 524
Query: 566 EKPLQLFTDMHREPINVAKFSHHSPL 591
LQ+F +MH+E INV KFS+HSP
Sbjct: 525 GTRLQVFANMHQEHINVVKFSNHSPF 550
>gi|302787521|ref|XP_002975530.1| hypothetical protein SELMODRAFT_103661 [Selaginella moellendorffii]
gi|300156531|gb|EFJ23159.1| hypothetical protein SELMODRAFT_103661 [Selaginella moellendorffii]
Length = 639
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 186/494 (37%), Positives = 265/494 (53%), Gaps = 51/494 (10%)
Query: 124 GSSCHVLILR--ATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMCE 181
G SC L L + K N+ G F L L +D S+ L CF MP L LSMC
Sbjct: 1 GLSCETLKLGLCSAPTWKFNLAGEFHRLEVLIVDHSRSITLLSSTCFEGMPKLAKLSMCG 60
Query: 182 TRIVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRA----SLDAKNQASGADDRVKDN 237
T IVNLWTT A+SKLP L ELRFQ C+CC+ TG C A + KN ++G+ ++
Sbjct: 61 TGIVNLWTTCRALSKLPSLRELRFQRCVCCEGTGHCIAPPPDDCEGKNISAGSSGDDQEV 120
Query: 238 EDQIVCKKFRDADE--------------VELPKYLRTMNLMELSSCLSPNLNGHAEMLDE 283
E + +K D + E +Y + S L +L+ L+
Sbjct: 121 EKMEIFQKGTDESDYWDSSGDEEEEEEEEEQEEYDELGEEEVVESELDTDLDEQFVYLET 180
Query: 284 V-----NDSNEFPGGAHKQDLMDANVKLKKYISHH-PSPICFEKHYREYMIASLPQLEVL 337
V N ++E P +Q +S+ S IC EK YR++MI+SLP+L+VL
Sbjct: 181 VEPEAGNVADEPPKAEERQ------------LSYRFQSTICHEKFYRQFMISSLPKLQVL 228
Query: 338 DNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSLLQKREMGTSGNYQNSSKPKQPNI 397
DNL I + R+ A V+ FE P R+ +E +V +L+ RE G + K+ I
Sbjct: 229 DNLEITQESRKKAWIVYCDNFERSPNTRRRREGIVEILKSRERGG-----DRGPHKRRKI 283
Query: 398 HRTQHFFSRSLSAAKLGSSAWPLLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGT 457
+ T R+LS +KL WP V + + ++R++PRQFEY+P +P+LM GT
Sbjct: 284 NET-----RALSTSKL--CDWPATSVVYNPCKSNVDISRRLKPRQFEYHPKDPALMVLGT 336
Query: 458 LDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHI-P 516
L+GE+ V+NHE + YI + + VLGLCW P K +AGSD+G + L+ L+ +
Sbjct: 337 LNGELAVVNHEEDRLVAYIQASAVQHRVLGLCWWNNEPDKFIAGSDNGVLELYSLSRMRA 396
Query: 517 PKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMH 576
+A SV + DFEQLTSVH+NS D+ FLASGY+KN+ LYD+ T + +++F D+H
Sbjct: 397 ATMACTYMCGSVHRFNDFEQLTSVHINSQDELFLASGYNKNIGLYDLQTARLVKVFPDLH 456
Query: 577 REPINVAKFSHHSP 590
+ INV KF+HHSP
Sbjct: 457 EDHINVVKFAHHSP 470
>gi|302783449|ref|XP_002973497.1| hypothetical protein SELMODRAFT_99919 [Selaginella moellendorffii]
gi|300158535|gb|EFJ25157.1| hypothetical protein SELMODRAFT_99919 [Selaginella moellendorffii]
Length = 641
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 186/494 (37%), Positives = 265/494 (53%), Gaps = 49/494 (9%)
Query: 124 GSSCHVLILR--ATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMCE 181
G SC L L + RK ++ G F L L +D S+ L CF MP L LSMC
Sbjct: 1 GLSCETLKLGQCSAPTRKFSLAGEFHRLEVLIVDHSRSITLLSSTCFEGMPKLAKLSMCG 60
Query: 182 TRIVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRA----SLDAKNQASGADDRVKDN 237
T IVNLWTT A+SKLP L ELRFQ C+CC+ TG C A D +N ++G+ ++
Sbjct: 61 TGIVNLWTTCRALSKLPSLRELRFQRCVCCEGTGHCIAPPPDDCDGQNISAGSSGDDQEV 120
Query: 238 EDQIVCKKFRDADE------------------VELPKYLRTMNLMELSSCLSPNLNGHAE 279
E + +K D + E +Y + S L +L+
Sbjct: 121 EKMEIFQKGTDESDYWDSSGDEEEEEEEEEEQEEQEEYDELGEEEVVESELDTDLDEQFV 180
Query: 280 MLDEVN--DSNEFPGGAHKQDLMDANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVL 337
L+ V N+ P A ++ L Y+ S IC EK Y+++MI+SLP+L+VL
Sbjct: 181 CLEAVEPEAGNDEPPKAEERQL--------SYLFQ--STICHEKFYQQFMISSLPKLQVL 230
Query: 338 DNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSLLQKREMGTSGNYQNSSKPKQPNI 397
DNL I + R+ A V+ FE P R+ +E +V +L+ RE G + K+ I
Sbjct: 231 DNLEITQESRKKAWIVYCDNFERSPNTRRRREGIVEILKSRERGG-----DRGPHKKRKI 285
Query: 398 HRTQHFFSRSLSAAKLGSSAWPLLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGT 457
+ T R+LS +KL WP V + + N+R++PRQFEY+P +P+LM GT
Sbjct: 286 NET-----RALSTSKL--CDWPATSVVYNPCKSNVDINRRLKPRQFEYHPKDPALMVLGT 338
Query: 458 LDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHI-P 516
L+GE+ V+NHE + YI + + VLGLCWL P K +AGSD+G + L+ L+ +
Sbjct: 339 LNGELAVVNHEEDRLVAYIQASTVQHRVLGLCWLNNEPDKFIAGSDNGVLELYSLSRMRA 398
Query: 517 PKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMH 576
+A SV + DFEQLTSVH+NS D+ FLASGY+KN+ LYD+ T + +++F +H
Sbjct: 399 ATMACTYMCGSVHRFNDFEQLTSVHINSQDELFLASGYNKNIGLYDLQTARLVKVFPHLH 458
Query: 577 REPINVAKFSHHSP 590
+ INV KF+HHSP
Sbjct: 459 EDHINVVKFAHHSP 472
>gi|168031214|ref|XP_001768116.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680554|gb|EDQ66989.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1262
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/324 (42%), Positives = 195/324 (60%), Gaps = 35/324 (10%)
Query: 302 ANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHL 361
+N+ + + H SPIC EK YRE+MI LP L+VLDN+ + +RE A+ VF FE L
Sbjct: 753 SNLAWALHGARHASPICCEKGYREFMITMLPALQVLDNVAVTDSERERARCVFEERFEPL 812
Query: 362 PYKRKHKESVVSLLQKREMGTSG-NYQNSSKPKQPNIHRTQHFFSRSLSAAKLGSSAWPL 420
R+ KE+++ +++ RE G G S+ + R+ + RSLSAAK+G+SAWP
Sbjct: 813 ANGRRVKENILKIIKLRETGGFGIRAPCDSRLGYIDDKRSPAEYIRSLSAAKMGTSAWPA 872
Query: 421 LHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIG 480
+ G +R RPRQFEY+P+ PS M FGT+ GEV+VINHE+ V Y+ SIG
Sbjct: 873 TESICRSKKPNLYGGRRCRPRQFEYHPTEPSYMVFGTVQGEVVVINHESDKVVGYVQSIG 932
Query: 481 GTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVA---------------DARGN 525
+S+LGLCWL K P+KL+AGS++GC++L+D+NH+ + ++GN
Sbjct: 933 APHSILGLCWLNKDPNKLIAGSENGCLQLYDVNHMRASMISANRRNASSSASSRYQSQGN 992
Query: 526 S-------------------SVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTE 566
++ TY FEQ TSVH+NSTDD F+ASGYS +V LYD+ T
Sbjct: 993 GGSGRQSLSGSFGSRSMRSPTIYTYDAFEQFTSVHINSTDDYFVASGYSNHVGLYDLRTG 1052
Query: 567 KPLQLFTDMHREPINVAKFSHHSP 590
LQ+F D+H+E INV KF++HSP
Sbjct: 1053 TQLQIFRDLHKEHINVVKFANHSP 1076
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 134/217 (61%), Gaps = 1/217 (0%)
Query: 4 DMSTLEARYLDSCRRRETQPNSSVLSWFSEAKIQNPNNEKCSILVYLDQLKNADIYPLID 63
D + L RYL +C R T P+ ++ + F + + Q+ EK ++ + LDQ+ D+ PLI+
Sbjct: 257 DYNGLNDRYLSACERHGTVPHGAISAAFDKVRSQHAKKEKQTLELLLDQIPETDMEPLIE 316
Query: 64 VFTEMDSFDIEAVDIL-SKRPCFLKEEYIMSLMHAIDQKLRVVDLSNITLRNDNLLDLCQ 122
+ + ++S D++AVD++ S L+ ++ ++ + KLR+ DL + L + + +L Q
Sbjct: 317 MLSAVESSDLDAVDVVFSSTVSNLRWPLLVQILRSAGSKLRMADLRDNVLGREAVRELFQ 376
Query: 123 VGSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMCET 182
G +C L L + IRKL M+G F +L+TL LD+C + L CFS MP L LSMC T
Sbjct: 377 GGFNCQSLDLSFSRIRKLEMLGYFPNLHTLKLDYCFPVTCLPLGCFSAMPKLTKLSMCGT 436
Query: 183 RIVNLWTTTAAISKLPYLMELRFQMCLCCKDTGPCRA 219
+++NLWTT+AA+ KL L ELRFQ CLCC+ TG C A
Sbjct: 437 KVMNLWTTSAALRKLSALRELRFQKCLCCQGTGQCAA 473
>gi|428172725|gb|EKX41632.1| hypothetical protein GUITHDRAFT_164342 [Guillardia theta CCMP2712]
Length = 911
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 156/278 (56%), Gaps = 15/278 (5%)
Query: 313 HPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVV 372
H + +C E+HYREY+IA +P LE LD I +R A+ VF FE Y R +
Sbjct: 458 HVNLLCSERHYREYIIAQMPWLETLDKRRISNTERAEARKVFLSKFEKFAYNRLRPINCT 517
Query: 373 SLLQKREMGTSGNYQNSSKPKQPNIHRTQHFFSRSLSAAKLGSSAWPLLHPVSSFSHIYK 432
L++ RE+G + S ++P + + S + A L S A P +
Sbjct: 518 LLMRMRELGLN------SADRRP---LSSSLTTDSEAPASLSSPA-AAGQPPGAQPSTRM 567
Query: 433 EGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLK 492
+RPRQFEY+P+ P + GT++GEVIV+NH G++ + G +S+LGLCWL+
Sbjct: 568 IAPSHLRPRQFEYHPTKPEELVIGTVNGEVIVLNHFTGSILGQATAAGPPHSILGLCWLR 627
Query: 493 KYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLAS 552
L++GSDSG ++L+D+N + A ++ Y +FE LTS+H++ DD+FL S
Sbjct: 628 LNDGLLISGSDSGNIQLYDVNLMKHSRA-----PTIYKYENFEHLTSLHIDCLDDKFLVS 682
Query: 553 GYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSP 590
GYS +VALYD+ K +Q F +H + INV KF++ SP
Sbjct: 683 GYSNDVALYDLKVGKKIQTFKSLHSQHINVLKFANFSP 720
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%)
Query: 126 SCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSLASLHEDCFSCMPYLMCLSMCETRIV 185
S L + I+KL + L TL LD+ +L + FS L+ LS+C T +
Sbjct: 211 SIKFLSVSGNRIKKLQALPPMPGLQTLILDWNPLQNNLSPEIFSECTSLVSLSLCSTALS 270
Query: 186 NLWTTTAAISKLPYLMELRFQ 206
NL AAIS L L L FQ
Sbjct: 271 NLPKAFAAISHLTNLRHLHFQ 291
>gi|452819106|gb|EME26197.1| transducin family protein / WD-40 repeat family protein [Galdieria
sulphuraria]
Length = 908
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 150/290 (51%), Gaps = 20/290 (6%)
Query: 315 SPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSL 374
+PIC + E+ IA P L+V++ + I DR A+ V ++F+ L YK + +++ +
Sbjct: 430 TPICDIATHCEFFIALCPFLQVINEMEIDEEDRRYAQKVLLKHFQILAYKDGYNLNILDI 489
Query: 375 LQKREMG-----TSGNYQNSSKPKQ-------PNIHRTQHFFSRSLSAAKLGSSAWPLLH 422
L KR++ SG++ + PN R Q + S K SA L
Sbjct: 490 LSKRQLSLKSRQVSGDHHLPVSMDEKDRLSCFPN-ERKQLYNGHSSHFEKCVLSA---LT 545
Query: 423 PVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNV-ACYIPSIGG 481
+ H + + R RQFEY+P P LMA GT+DGEV+++NHE + C +
Sbjct: 546 TSRTTVHCSRICHVPYRARQFEYHPLIPELMAVGTVDGEVLLLNHEKQLLLGCSRINSRE 605
Query: 482 TNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVH 541
++L LCWL YP KL+ GSD G ++L D++ + D + V ++ +FE TS+H
Sbjct: 606 NETILALCWLPNYPEKLLIGSDHGTIQLLDISSRDSQGVDFQ---CVRSFENFELQTSLH 662
Query: 542 VNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSPL 591
N T FL SGYS ++ +YDI T +Q + H E INV +FS+ SP
Sbjct: 663 ANCTSQFFLTSGYSTDIGVYDIRTGVKVQTLKECHSEHINVTRFSNLSPF 712
>gi|449015498|dbj|BAM78900.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 938
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 140/299 (46%), Gaps = 69/299 (23%)
Query: 326 YMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEH--LPYKRKHKESVVSLLQKREMGTS 383
++ +P LE L+ P+ + R S +A YF+ + + + +VS ++ RE G
Sbjct: 486 FLTVQVPTLESLNGTPLNKETR----SKYAEYFDTGLSGFGHERQSHIVSRVEARENG-- 539
Query: 384 GNYQNSSKPKQPNIHRTQHFFSRSLSAAKLGSSAWPLLHPVSSFSHIYKEGNKRV----- 438
S K P R +L ++ Y R+
Sbjct: 540 -----SDHAKGPR---------RGFGMG--------ILERIAPLRLRYDRPRARLVLPPS 577
Query: 439 -RPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGT--------------- 482
RPRQFEY+PS P +A GTL G V+ +N S+ G+
Sbjct: 578 YRPRQFEYHPSVPGRVAVGTLQGTVLFMNTSASGEPLTEISLTGSIPQARALFPTSSDVY 637
Query: 483 ---------NSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGN--SSVATY 531
+VLGLCWL+++P L+AG+D+G V L + A+ G+ +++ +
Sbjct: 638 HWRDATTHRGTVLGLCWLRQHPETLLAGADNGAVGLI-------RFAEDEGSLAHTLSRF 690
Query: 532 YDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSP 590
+F LTS+H N++D+ F+ SGYS +VALYDI ++ ++LF HR+ INV KFSHH+P
Sbjct: 691 PEFVGLTSLHANASDEMFITSGYSIDVALYDIRKQQQIRLFHACHRKHINVVKFSHHAP 749
>gi|440290411|gb|ELP83823.1| WD-repeat protein, putative [Entamoeba invadens IP1]
Length = 580
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 13/165 (7%)
Query: 428 SHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLG 487
+H K N RQFE+NP PS + G + GE+ + N E N+ I T+ G
Sbjct: 266 THFDKIFNGHDDIRQFEFNPHVPSTLLVGKMSGELFIGNTETNNIQNVISPF--TSPAFG 323
Query: 488 LCWLKKYPSK--LVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNST 545
+CW + K V GS G + FD + R N +V DF+ +TSVH+NST
Sbjct: 324 ICWNPRNDLKNTCVLGSRDGQLAFFDFD---------RKNDAVLVKDDFQHITSVHINST 374
Query: 546 DDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSP 590
+ + SG+ V L D T L++F ++HRE +NVAKF + SP
Sbjct: 375 STRIITSGHENTVNLLDYTTATILRIFGNLHRENVNVAKFGNTSP 419
>gi|330842034|ref|XP_003292991.1| hypothetical protein DICPUDRAFT_92970 [Dictyostelium purpureum]
gi|325076725|gb|EGC30489.1| hypothetical protein DICPUDRAFT_92970 [Dictyostelium purpureum]
Length = 457
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 135/276 (48%), Gaps = 38/276 (13%)
Query: 323 YREYMIASLPQLEVLDNLPIGRLDR-EIAKSVFARYFEHLPYKRKHKESVVSLLQKREMG 381
YREYMI+ L L++LDN I +R + + V ++ ++ K++ V+ + K +
Sbjct: 52 YREYMISHLVSLKILDNQEITESERLQATELVRLKFITCDSWREKYQ---VNQIHKDILN 108
Query: 382 TSGNYQNSSKPKQPNIHRTQHFFSRSLSAAKLGSSAWPLLHPVSSFSHIYKEG------N 435
N N+ K + NI++T + + + + I E
Sbjct: 109 LEIN--NTMKCRT-NINKT---------------TPKTIFKNYTEYQDILNENPRVNTLE 150
Query: 436 KRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYP 495
K V PRQ EYNPS P+L+ G ++G V V + EN + Y + + +LGL W+K YP
Sbjct: 151 KIVYPRQLEYNPSIPNLIVVGAMNGRVHVYD-ENKDEIIYDNIVSNPSMILGLSWIKNYP 209
Query: 496 SKLVAGSDSGCVRLFDLNHIP-PKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGY 554
+AGS++G + LF+L+ PK + + ++ F +L+S+H N D + SG
Sbjct: 210 C-FLAGSENGSINLFNLSKTKNPK-------NQILSFDPFYKLSSLHTNCQSDTMVVSGS 261
Query: 555 SKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSP 590
V++YDIN+ L+ H + INV K++ + P
Sbjct: 262 CDFVSIYDINSCTLLRKLEKAHTKKINVVKYASYDP 297
>gi|167379164|ref|XP_001735019.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903151|gb|EDR28801.1| hypothetical protein EDI_130780 [Entamoeba dispar SAW760]
Length = 577
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 147/337 (43%), Gaps = 46/337 (13%)
Query: 258 LRTMNLMELSSCLSPNLNGHAEMLDEVNDSNEFPGGAHKQDLMDANVKLKKYISHHPSPI 317
+R++ M +CL + H +++D K L + + I++ P+P+
Sbjct: 123 IRSLYKMTTLTCLELPRSTHTKLIDPKQALQRIRFQRRKGKLFKTQKEYYERINNTPTPL 182
Query: 318 CFEKH-YREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSLLQ 376
F+ Y +I LP L V + R+D+ + + + + + +H S+++ +Q
Sbjct: 183 IFDSDIYIRTLILFLPLLIVFNK---ERIDKNVRRLIAQSVNDEVSIPLQHT-SIINYIQ 238
Query: 377 KREMGTSGNYQNSSKPKQPNIHRTQHFFSRSLSAAKLGSSAWPLLHPVSSFSHIYKEGNK 436
++G I R + F +L + + + L P
Sbjct: 239 HIQLG--------------KIQRNYNSFITTL--YRFNETPFKQLIPEIEV--------- 273
Query: 437 RVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWL--KKY 494
PRQ EYN P + L+G++ + + + N++ I S + S G+CW K
Sbjct: 274 ---PRQIEYNKCIPGKLLVSCLNGKIYLYDFQ-SNISTQIDSPFNS-SPYGICWCSEKSK 328
Query: 495 PSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGY 554
+ + GSD+G + +D ++ + T + E++TSVH+N +F+ SG+
Sbjct: 329 ANNCIIGSDTGKLCYYDF---------SKRKQPLLTIDNLERITSVHLNCNCSKFITSGF 379
Query: 555 SKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSPL 591
N+ L+D T K +++ +H E +NVAKFS+ +P
Sbjct: 380 ETNINLFDFETFKLERVYGSLHNENVNVAKFSNTNPF 416
>gi|449705466|gb|EMD45503.1| Hypothetical protein EHI5A_061670 [Entamoeba histolytica KU27]
Length = 577
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 148/341 (43%), Gaps = 54/341 (15%)
Query: 258 LRTMNLMELSSCLSPNLNGHAEMLDEVNDSNEFPGGAHKQDLMDANVKLKKYISHHPSPI 317
+R++ M +CL + H +++D + L + + I++ P+P+
Sbjct: 123 IRSLYKMTTLTCLELPRSTHTKLVDPRQALQRTRFQRRRGKLFKTQKEYYERINNTPAPL 182
Query: 318 CFEKH-YREYMIASLPQLEVLDNLPI-GRLDREIAKSV---FARYFEHLPYKRKHKESVV 372
F+ Y +I LP L V + I G + R +A+SV + +H P ++
Sbjct: 183 LFDSDVYIRTLILFLPLLVVFNKERIDGTVRRLVAQSVNDEVSIPLQHTP--------IL 234
Query: 373 SLLQKREMGTSGNYQNSSKPKQPNIHRTQHFFSRSLSAAKLGSSAWPLLHPVSSFSHIYK 432
+ + +G + Q +S S +A G + P F +
Sbjct: 235 NYIHHTPLG-----------------KIQRNYS-SFVSALYGFNETP-------FKQLMP 269
Query: 433 EGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLK 492
E PRQ EYN P + L+G++ + N + N + I S + S G+CW
Sbjct: 270 EIEV---PRQIEYNKCIPGKLIISCLNGKIYLYNLQ-SNTSTQINSPFNS-SPYGICWCS 324
Query: 493 KY--PSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFL 550
+ + + GSD+G + +D ++G + T + E++TSVH+N +F+
Sbjct: 325 QMSMANNCIIGSDTGKLCYYDF---------SKGKEPLLTIDNLERITSVHLNCNCSKFI 375
Query: 551 ASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSPL 591
SG+ NV L+D T + +++ +H E +NVAKFS+ +P
Sbjct: 376 TSGFETNVNLFDFETHQLERVYGSLHNENVNVAKFSNTNPF 416
>gi|183232155|ref|XP_648061.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169802172|gb|EAL42675.2| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
Length = 449
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 13/154 (8%)
Query: 440 PRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKY--PSK 497
PRQ EYN P + L+G++ + N + N + I S + S G+CW + +
Sbjct: 146 PRQIEYNKCIPGKLIISCLNGKIYLYNLQ-SNTSTQINSPFNS-SPYGICWCSQMSMANN 203
Query: 498 LVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKN 557
+ GSD+G + +D ++G + T + E++TSVH+N +F+ SG+ N
Sbjct: 204 CIIGSDTGKLCYYDF---------SKGKEPLLTIDNLERITSVHLNCNCSKFITSGFETN 254
Query: 558 VALYDINTEKPLQLFTDMHREPINVAKFSHHSPL 591
V L+D T + +++ +H E +NVAKFS+ +P
Sbjct: 255 VNLFDFETHQLERVYGSLHNENVNVAKFSNTNPF 288
>gi|209882906|ref|XP_002142888.1| F-box domain-containing protein [Cryptosporidium muris RN66]
gi|209558494|gb|EEA08539.1| F-box domain-containing protein [Cryptosporidium muris RN66]
Length = 1256
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 55/201 (27%)
Query: 438 VRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSV-----LGLCWLK 492
+ RQFE++ + P + GT DG+ +I+ Y + G SV +GL W
Sbjct: 824 LEARQFEFHYTRPDWIIIGTADGQTKLIDR-------YRDLVVGQESVSITPIIGLGWYH 876
Query: 493 KYPSKLVAGS-DSGCVRLFDLNHIPPKVADARG--------------------------- 524
+P LV+GS G + + +N P + ++
Sbjct: 877 NHPEFLVSGSCIVGSISVIRINDNPFFINESEYEHDDSILTGCSSRICNSTNSLCGASIS 936
Query: 525 -------NSSVATYY--------DFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPL 569
NSS Y F+QL+SV +NSTDD FLASG+ K++A YD T +
Sbjct: 937 KDLQYPLNSSSLPYTLKVQKECRPFQQLSSVSINSTDDFFLASGFGKSIACYDARTGEQT 996
Query: 570 QLFTDMHREPINVAKFSHHSP 590
+LF D+H IN +FSH+ P
Sbjct: 997 KLFQDIHMSHINTVRFSHYHP 1017
>gi|299116722|emb|CBN76281.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1000
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 437 RVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPS---IGGTNSVLGLCWLKK 493
R RPRQFEY+P + ++ FGTL GE +V + + NV I S +S+LGLCW+K+
Sbjct: 13 RYRPRQFEYHPLHEDVVVFGTLRGEAVVADVASNNVCSSISSGLSKDKHDSILGLCWMKR 72
Query: 494 YPSKLVAGSDSGCVRLFDLNHIP 516
PS+ V GS GC+RL D +P
Sbjct: 73 SPSRFVVGSSHGCLRLCDAGAMP 95
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 49/66 (74%)
Query: 528 VATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSH 587
V + FE+LTSVH+NSTDDQ LASGY+ V L+D++T + ++ F D+H + IN+++F++
Sbjct: 175 VTEFSLFEKLTSVHINSTDDQMLASGYTYGVKLFDLSTGQVVRDFKDVHEDHINISRFAN 234
Query: 588 HSPLCL 593
HSP
Sbjct: 235 HSPFVF 240
>gi|407038435|gb|EKE39125.1| hypothetical protein ENU1_141010 [Entamoeba nuttalli P19]
Length = 449
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 13/154 (8%)
Query: 440 PRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKY--PSK 497
PRQ EYN P + L+G++ + + ++ N + I S + S G+CW + +
Sbjct: 146 PRQIEYNKCIPGKLIVSCLNGKIYLYDLQS-NTSTQINSPFNS-SPYGICWCSEMSMANN 203
Query: 498 LVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKN 557
+ GSD+G + +D ++G + T + E++TSVH+N +F+ SG+ N
Sbjct: 204 CIIGSDTGKLCYYDF---------SKGKEPLLTIDNLERITSVHLNCNCSKFITSGFETN 254
Query: 558 VALYDINTEKPLQLFTDMHREPINVAKFSHHSPL 591
V L+D T + +++ +H E +NVAKFS+ +P
Sbjct: 255 VNLFDFETHQLERVYGSLHNENVNVAKFSNTNPF 288
>gi|66827279|ref|XP_646994.1| hypothetical protein DDB_G0268826 [Dictyostelium discoideum AX4]
gi|60475066|gb|EAL73002.1| hypothetical protein DDB_G0268826 [Dictyostelium discoideum AX4]
Length = 1019
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 141/340 (41%), Gaps = 98/340 (28%)
Query: 321 KHYREYMIASLP-QLEVLDNLPIGRLDREIAKSVFAR--YFEHLPYKRKHKESVVSLL-- 375
K+YREY I QL+ LD I ++R+ +K + + F + + +S +S+
Sbjct: 524 KYYREYFITMFGNQLKSLDGKIIDEIERKYSKEIVNKNFIFPNNNNNNNNDKSEISICRS 583
Query: 376 --QKREMG-------TSGNYQNSSKPKQPNIHR----TQHFFSRSLSAAKLGSSAWPLLH 422
Q RE+ ++ N++K + I++ + +F++++ P++
Sbjct: 584 PNQFREINKLLINCEIKDSFNNTNKYRNKLINKKILISSNFYNKN-----------PIIK 632
Query: 423 PVSSFSHIYKEGNKRVR-PRQFEYNPSNPSLMAFGTLDGEVIV-----INHENGNVACY- 475
+ K VR PRQ EY+P+ ++ G++DG + V IN EN N + Y
Sbjct: 633 DI-----------KTVRYPRQIEYHPNLDGILVVGSIDGFIEVLDLHSINDENNNNSDYE 681
Query: 476 -------------------------------------------IPSIGGTNSVLGLCWLK 492
SI G ++LGL W+K
Sbjct: 682 GSFYSYLKNQLRSLSLNPQTLPSPSASSSSLSSSLPLRKPPLFSSSINGNGNILGLSWMK 741
Query: 493 KYP-SKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLA 551
+ +K + G+++G ++L D + + S +A Y + +LTS+H N F+
Sbjct: 742 ESSNTKFLVGTENGIIQLIDF-------SKSVNESMIAQYPIYPRLTSLHSNCNSSSFIT 794
Query: 552 SGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSPL 591
SG + +++YDI + + H INV K+S+ P
Sbjct: 795 SGSNDFISIYDIERQSLIGNIKKAHTNKINVVKYSNSDPF 834
>gi|440293016|gb|ELP86188.1| hypothetical protein EIN_328950 [Entamoeba invadens IP1]
Length = 598
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 31/175 (17%)
Query: 415 SSAWPLLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVAC 474
+S W + +SS PRQFEY+P + L A GT+ G + V++H C
Sbjct: 276 TSQWDKIEGISS-------------PRQFEYSPVSGEL-AIGTMKGAIYVVDHN----TC 317
Query: 475 YIPSIGGTNSVLGLCWLKKYPSKL--VAGSDSGCVRLFDLNHIPPKVADARGNSSVATYY 532
+ + G+ W K +++ V GS G + + D +S +
Sbjct: 318 QRIQTTYNDPIYGIGWYKTRNNRMKAVVGSSEGELGVID-----------SFQTSYTHIH 366
Query: 533 DFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSH 587
E L S+HVN++D + SG V L+D NT + + F +H +NVA+F +
Sbjct: 367 SLENLFSLHVNTSDRYLVTSGNGNGVCLFDANTFQVYKKFDAIHEGKVNVARFGN 421
>gi|167384343|ref|XP_001736908.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900487|gb|EDR26795.1| hypothetical protein EDI_252600 [Entamoeba dispar SAW760]
Length = 501
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 440 PRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKY--PSK 497
PRQ +++ NP +A T +G++ V + + Y LGL W K SK
Sbjct: 197 PRQIDFSLINPGSIALTTKNGKLFVGCIHSEKLIEYETVFDSL--TLGLNWGKTLNTSSK 254
Query: 498 LVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKN 557
++ GS G V LFD N S+ T + ++++S+ +N +F++SGY N
Sbjct: 255 ILVGSLDGMVSLFDTN----------TKYSLKTIDNLQRVSSLSINCDSSKFISSGYENN 304
Query: 558 VALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCL 593
+ +++ T + ++ H + INVA FS +P L
Sbjct: 305 IFVFNFETMQLHRVLGGFHNDIINVASFSKKNPSIL 340
>gi|167382688|ref|XP_001733328.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901384|gb|EDR27467.1| hypothetical protein EDI_092580 [Entamoeba dispar SAW760]
Length = 532
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 17/158 (10%)
Query: 439 RPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYP--S 496
+PRQ +++P L+ G+L GE+ + N E+ + IPSI + G+ W + + S
Sbjct: 285 KPRQLDFSPITGELVV-GSLTGEIYIYN-EHFPIKT-IPSIT-RKPIYGIGWFRTHQNQS 340
Query: 497 KLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSK 556
K+V G++ G LF +N +++ E L S+H+NS D+ + +G
Sbjct: 341 KVVIGNNEG--NLFLVN---------TSDTTCKQLQSIEILLSLHINSNDESMVTTGNEC 389
Query: 557 NVALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLL 594
V ++D NT K F +H+ +NVA+F P L+
Sbjct: 390 GVTIFDTNTFKIKHKFDSIHQGAVNVARFGSIDPNLLV 427
>gi|66358740|ref|XP_626548.1| 2x WD domain containing protein [Cryptosporidium parvum Iowa II]
gi|46227978|gb|EAK88898.1| 2x WD domain containing protein [Cryptosporidium parvum Iowa II]
Length = 425
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 26/132 (19%)
Query: 485 VLGLCWLKKYPSKLVAGS-DSGCVRLFDLNHIP-----PKVADARGNSSVATYYD----- 533
++GL W +P VAGS G + + P + D N D
Sbjct: 31 IIGLSWFNCHPQTFVAGSCLLGTISILSYKENPFYQPIDYLQDQNNNFQSNRKVDQDKQE 90
Query: 534 ---------------FEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHRE 578
F QL+S+ VN+TDD +LASG+ K+V LYD NT +++ MH
Sbjct: 91 DKFPYLFNTENKSKPFPQLSSLSVNATDDYYLASGFGKSVGLYDTNTGSQVKILPSMHMS 150
Query: 579 PINVAKFSHHSP 590
IN+ +F+++ P
Sbjct: 151 HINIVRFANYHP 162
>gi|67483323|ref|XP_656936.1| WD domain containing protein [Entamoeba histolytica HM-1:IMSS]
gi|56474173|gb|EAL51556.1| WD domain containing protein [Entamoeba histolytica HM-1:IMSS]
gi|449708135|gb|EMD47656.1| WD domain containing protein [Entamoeba histolytica KU27]
Length = 593
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 439 RPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYP--S 496
+PRQ +++P L+ G+L+GEV + N E+ + I + G+ W + + S
Sbjct: 285 KPRQLDFSPVTGELVV-GSLNGEVYIYN-EHFPIKTITSII--RKPIYGIGWFRTHQNQS 340
Query: 497 KLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSK 556
K+V G++ G LF +N +++ E L S+H+NS D+ + +G
Sbjct: 341 KVVIGNNEG--NLFLVN---------TSDTTCRQLQTIEILLSLHINSNDESMVTTGNEC 389
Query: 557 NVALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLL 594
V ++D NT F +H+ +NVA+F P L+
Sbjct: 390 GVTIFDTNTFNIKHKFDSIHQGAVNVARFGSIDPNLLV 427
>gi|407040960|gb|EKE40444.1| WD domain, G-beta repeat-containing protein [Entamoeba nuttalli
P19]
Length = 593
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 439 RPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLK--KYPS 496
+PRQ +++P L+ G+L+GEV + N E+ + I + G+ W + + S
Sbjct: 285 KPRQLDFSPVTGELVV-GSLNGEVYIYN-EHFPIKTITSVI--RKPIYGIGWFRTTQNQS 340
Query: 497 KLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSK 556
K+V G++ G LF +N +++ E L S+H+NS D+ + +G
Sbjct: 341 KVVIGNNEG--NLFLVN---------TSDTTCRQLQTIEILLSLHINSNDESMVTTGNGC 389
Query: 557 NVALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLL 594
V ++D NT F +H+ +NVA+F P L+
Sbjct: 390 GVTIFDTNTFNIKHKFDSIHQGAVNVARFGSVDPNLLV 427
>gi|344280758|ref|XP_003412149.1| PREDICTED: DNA damage-binding protein 2-like [Loxodonta africana]
Length = 439
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 88/227 (38%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWPLL---------HPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG +AWP+L H ++S+ +K R ++P++PS +A G
Sbjct: 71 RALHQHKLGKAAWPMLQQSLQQSFLHSLASYRIFHKAAPFDRRATSLAWHPTHPSTLAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ S G RL D
Sbjct: 131 SKGGDILLWNFNTKDKPTFIKGIGAGGSITGLKFNPLNTNQFFTSSMEGTTRLQDFKGNT 190
Query: 517 PKVADARG-------------NSSVATYYD---------------------FEQLTSVHV 542
+V + G S V D +++T V +
Sbjct: 191 LRVFTSSGTCNLWFCSLDVSAGSRVVVTGDNAGQVVLLNMDGKELWNLRLHKKKVTHVAL 250
Query: 543 NSTDDQFLASG-YSKNVALYDINTEKPLQLFTDM--HREPINVAKFS 586
N D LA+ + V ++D+ + F HR P+N A FS
Sbjct: 251 NPCCDWLLATASVDQTVKIWDLRQVRGKSSFLSSLPHRHPVNAACFS 297
>gi|296218035|ref|XP_002755275.1| PREDICTED: DNA damage-binding protein 2 isoform 1 [Callithrix
jacchus]
Length = 427
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 71 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDILLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 190
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D NS + D +++T V +
Sbjct: 191 LRVFASSDTINIWFCSLDVSANSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVAL 250
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 251 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 297
>gi|386780674|ref|NP_001247766.1| DNA damage-binding protein 2 [Macaca mulatta]
gi|355752171|gb|EHH56291.1| Damage-specific DNA-binding protein 2 [Macaca fascicularis]
gi|383411915|gb|AFH29171.1| DNA damage-binding protein 2 [Macaca mulatta]
Length = 427
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 93/238 (39%), Gaps = 46/238 (19%)
Query: 395 PNIHRTQHFFSRSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEY 445
P I H R+L KLG ++WP LH + S+ + K R +
Sbjct: 60 PQILPPCHSIVRTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAW 119
Query: 446 NPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSG 505
+P++PS +A G+ G++++ N + +I IG S+ GL + ++ A S G
Sbjct: 120 HPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG 179
Query: 506 CVRLFDLNHIPPKV-------------ADARGNSSVATYYD------------------- 533
RL D +V D +S + D
Sbjct: 180 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLR 239
Query: 534 --FEQLTSVHVNSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
+++T V +N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 240 MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 297
>gi|355566562|gb|EHH22941.1| Damage-specific DNA-binding protein 2 [Macaca mulatta]
Length = 427
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 93/238 (39%), Gaps = 46/238 (19%)
Query: 395 PNIHRTQHFFSRSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEY 445
P I H R+L KLG ++WP LH + S+ + K R +
Sbjct: 60 PQILPPCHSIVRTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAW 119
Query: 446 NPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSG 505
+P++PS +A G+ G++++ N + +I IG S+ GL + ++ A S G
Sbjct: 120 HPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG 179
Query: 506 CVRLFDLNHIPPKV-------------ADARGNSSVATYYD------------------- 533
RL D +V D +S + D
Sbjct: 180 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLR 239
Query: 534 --FEQLTSVHVNSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
+++T V +N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 240 MHKKKVTHVALNPCCDWFLATASLDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 297
>gi|380805199|gb|AFE74475.1| DNA damage-binding protein 2, partial [Macaca mulatta]
Length = 293
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 93/238 (39%), Gaps = 46/238 (19%)
Query: 395 PNIHRTQHFFSRSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEY 445
P I H R+L KLG ++WP LH + S+ + K R +
Sbjct: 12 PQILPPCHSIVRTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAW 71
Query: 446 NPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSG 505
+P++PS +A G+ G++++ N + +I IG S+ GL + ++ A S G
Sbjct: 72 HPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG 131
Query: 506 CVRLFDLNHIPPKV-------------ADARGNSSVATYYD------------------- 533
RL D +V D +S + D
Sbjct: 132 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLR 191
Query: 534 --FEQLTSVHVNSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
+++T V +N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 192 MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 249
>gi|237830075|ref|XP_002364335.1| WD domain, G-beta repeat-containing protein [Toxoplasma gondii ME49]
gi|211961999|gb|EEA97194.1| WD domain, G-beta repeat-containing protein [Toxoplasma gondii ME49]
Length = 2647
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 535 EQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSP 590
+QL+S+ V+ TDD L SG+S N++LYD+ T + L +H IN +FS SP
Sbjct: 2092 QQLSSLSVSCTDDFLLLSGFSTNLSLYDVATGQRLGALQRLHTGSINTVRFSSSSP 2147
>gi|395815647|ref|XP_003781336.1| PREDICTED: DNA damage-binding protein 2 isoform 1 [Otolemur
garnettii]
Length = 427
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 402 HFFSRSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSL 452
H R+L KLG +AWP LH + S+ K R ++P++PS
Sbjct: 67 HSIVRTLHQYKLGRAAWPALQQGLQQSFLHSLDSYRIFQKAAPFDRRATSLVWHPTHPST 126
Query: 453 MAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+A G+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 127 VAVGSKGGDILLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFFASSMEGTTRLQDF 186
>gi|401871508|pdb|4E5Z|B Chain B, Damaged Dna Induced Uv-Damaged Dna-Binding Protein
(Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna
Repair
Length = 436
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 79 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 138
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 139 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 198
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D +S + D +++T V +
Sbjct: 199 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVAL 258
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 259 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 305
>gi|119588365|gb|EAW67959.1| damage-specific DNA binding protein 2, 48kDa, isoform CRA_h [Homo
sapiens]
Length = 341
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 71 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 190
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D +S + D +++T V +
Sbjct: 191 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVAL 250
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 251 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 297
>gi|400260816|pdb|4E54|B Chain B, Damaged Dna Induced Uv-Damaged Dna-Binding Protein
(Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna
Repair
Length = 435
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 79 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 138
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 139 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 198
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D +S + D +++T V +
Sbjct: 199 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVAL 258
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 259 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 305
>gi|297688803|ref|XP_002821864.1| PREDICTED: DNA damage-binding protein 2 isoform 1 [Pongo abelii]
Length = 427
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 71 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 190
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D +S + D +++T V +
Sbjct: 191 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVAL 250
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 251 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 297
>gi|426368195|ref|XP_004051096.1| PREDICTED: DNA damage-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
Length = 427
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 71 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 190
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D +S + D +++T V +
Sbjct: 191 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVAL 250
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 251 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 297
>gi|4557515|ref|NP_000098.1| DNA damage-binding protein 2 [Homo sapiens]
gi|332836307|ref|XP_001167874.2| PREDICTED: DNA damage-binding protein 2 isoform 5 [Pan troglodytes]
gi|397488369|ref|XP_003815239.1| PREDICTED: DNA damage-binding protein 2 isoform 1 [Pan paniscus]
gi|12230033|sp|Q92466.1|DDB2_HUMAN RecName: Full=DNA damage-binding protein 2; AltName: Full=DDB p48
subunit; Short=DDBb; AltName: Full=Damage-specific
DNA-binding protein 2; AltName: Full=UV-damaged
DNA-binding protein 2; Short=UV-DDB 2
gi|1536966|gb|AAB07897.1| DDBb p48 [Homo sapiens]
gi|12652689|gb|AAH00093.1| Damage-specific DNA binding protein 2, 48kDa [Homo sapiens]
gi|27979316|gb|AAO25655.1| damage-specific DNA binding protein 2, 48kDa [Homo sapiens]
gi|30583117|gb|AAP35803.1| damage-specific DNA binding protein 2, 48kDa [Homo sapiens]
gi|60655475|gb|AAX32301.1| damage-specific DNA binding protein 2 [synthetic construct]
gi|119588358|gb|EAW67952.1| damage-specific DNA binding protein 2, 48kDa, isoform CRA_a [Homo
sapiens]
gi|123979632|gb|ABM81645.1| damage-specific DNA binding protein 2, 48kDa [synthetic construct]
gi|189053819|dbj|BAG36072.1| unnamed protein product [Homo sapiens]
gi|261858488|dbj|BAI45766.1| damage-specific DNA binding protein 2, 48kDa [synthetic construct]
gi|312151772|gb|ADQ32398.1| damage-specific DNA binding protein 2, 48kDa [synthetic construct]
gi|410206556|gb|JAA00497.1| damage-specific DNA binding protein 2, 48kDa [Pan troglodytes]
gi|410249070|gb|JAA12502.1| damage-specific DNA binding protein 2, 48kDa [Pan troglodytes]
gi|410289482|gb|JAA23341.1| damage-specific DNA binding protein 2, 48kDa [Pan troglodytes]
gi|410328753|gb|JAA33323.1| damage-specific DNA binding protein 2, 48kDa [Pan troglodytes]
Length = 427
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 71 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 190
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D +S + D +++T V +
Sbjct: 191 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVAL 250
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 251 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 297
>gi|30585199|gb|AAP36872.1| Homo sapiens damage-specific DNA binding protein 2, 48kDa
[synthetic construct]
gi|61372705|gb|AAX43895.1| damage-specific DNA binding protein 2 [synthetic construct]
gi|61372712|gb|AAX43896.1| damage-specific DNA binding protein 2 [synthetic construct]
Length = 428
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 71 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 190
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D +S + D +++T V +
Sbjct: 191 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVAL 250
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 251 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 297
>gi|221507205|gb|EEE32809.1| WD domain, G-beta repeat-containing protein, putative [Toxoplasma
gondii VEG]
Length = 3682
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 535 EQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSP 590
+QL+S+ V+ TDD L SG+S N++LYD+ T + L +H IN +FS SP
Sbjct: 3127 QQLSSLSVSCTDDFLLLSGFSTNLSLYDVATGQRLGALQRLHTGSINTVRFSSSSP 3182
>gi|221487406|gb|EEE25638.1| WD domain, G-beta repeat-containing protein, putative [Toxoplasma
gondii GT1]
Length = 3679
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 535 EQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSP 590
+QL+S+ V+ TDD L SG+S N++LYD+ T + L +H IN +FS SP
Sbjct: 3124 QQLSSLSVSCTDDFLLLSGFSTNLSLYDVATGQRLGALQRLHTGSINTVRFSSSSP 3179
>gi|221046722|pdb|3EI4|B Chain B, Structure Of The Hsddb1-Hsddb2 Complex
gi|221046724|pdb|3EI4|D Chain D, Structure Of The Hsddb1-Hsddb2 Complex
gi|221046726|pdb|3EI4|F Chain F, Structure Of The Hsddb1-Hsddb2 Complex
Length = 436
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 80 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 139
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 140 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 199
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D +S + D +++T V +
Sbjct: 200 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVAL 259
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 260 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 306
>gi|332259878|ref|XP_003279011.1| PREDICTED: DNA damage-binding protein 2 isoform 1 [Nomascus
leucogenys]
Length = 427
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 71 RTLHEHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 190
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D +S + D +++T V +
Sbjct: 191 LRVFTSSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVAL 250
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 251 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 297
>gi|402893633|ref|XP_003909996.1| PREDICTED: DNA damage-binding protein 2 isoform 1 [Papio anubis]
Length = 427
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 71 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 190
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D +S + D +++T V +
Sbjct: 191 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVAL 250
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 251 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 297
>gi|327286701|ref|XP_003228068.1| PREDICTED: u5 small nuclear ribonucleoprotein 40 kDa protein-like
[Anolis carolinensis]
Length = 359
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 EIHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R ++V T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLHL 598
+D+ K +T N + S +CLL HL
Sbjct: 221 WDLRQNK--LTYTMRGHADYNQLQISIKINVCLLTAHL 256
>gi|403254729|ref|XP_003920111.1| PREDICTED: DNA damage-binding protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 427
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L +LG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 71 RTLHQHRLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDILLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 190
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D +S + D +++T V +
Sbjct: 191 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVAL 250
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 251 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS 297
>gi|311247887|ref|XP_003122861.1| PREDICTED: DNA damage-binding protein 2-like [Sus scrofa]
Length = 427
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH ++S+ K R ++P++P ++A G
Sbjct: 71 RALHHYKLGRTSWPSLQQGLQQSFLHTLASYRIFQKAAPFDRRATSLAWHPTHPRILAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ S G RL D
Sbjct: 131 SKGGDILLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNANQFFTSSMEGTTRLQDFKGNT 190
Query: 517 PKVADARGNSSV------------------------------ATYYDF----EQLTSVHV 542
+V + G ++ ++ +++T V +
Sbjct: 191 LRVFASSGTCNIWFCSLDVSVRSRVVVTGDNVGHVILLNLDGKELWNLRMHKKKVTHVAL 250
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 251 NPCCDWFLATASVDQTVKIWDLRQVRGKSSFLYSLPHRHPVNAALFS 297
>gi|291384950|ref|XP_002709135.1| PREDICTED: damage-specific DNA binding protein 2 [Oryctolagus
cuniculus]
Length = 427
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L +LG +AWP LH ++S+ K R ++P++PS +A G
Sbjct: 71 RALHQHRLGRTAWPSLQQGLQQSFLHSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLN 513
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDIMLWNFRVKDRPTFIKGIGAGGSITGLKFNLLNTNQFFASSMEGTTRLQDFT 187
>gi|350596438|ref|XP_003361173.2| PREDICTED: DNA damage-binding protein 2-like [Sus scrofa]
Length = 403
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH ++S+ K R ++P++P ++A G
Sbjct: 47 RALHHYKLGRTSWPSLQQGLQQSFLHTLASYRIFQKAAPFDRRATSLAWHPTHPRILAVG 106
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ S G RL D
Sbjct: 107 SKGGDILLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNANQFFTSSMEGTTRLQDFKGNT 166
Query: 517 PKVADARGNSSV------------------------------ATYYDF----EQLTSVHV 542
+V + G ++ ++ +++T V +
Sbjct: 167 LRVFASSGTCNIWFCSLDVSVRSRVVVTGDNVGHVILLNLDGKELWNLRMHKKKVTHVAL 226
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 227 NPCCDWFLATASVDQTVKIWDLRQVRGKSSFLYSLPHRHPVNAALFS 273
>gi|119588361|gb|EAW67955.1| damage-specific DNA binding protein 2, 48kDa, isoform CRA_d [Homo
sapiens]
Length = 294
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 90/232 (38%), Gaps = 46/232 (19%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 57 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 116
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 117 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI 176
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D +S + D +++T V +
Sbjct: 177 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVAL 236
Query: 543 NSTDDQFLASG-YSKNVALYDINT--EKPLQLFTDMHREPINVAKFSHHSPL 591
N D FLA+ + V ++D+ K L++ HR P+N S S L
Sbjct: 237 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAGVISQTSSL 288
>gi|392597590|gb|EIW86912.1| glutamate-rich WD repeat containing [Coniophora puteana RWD-64-598
SS2]
Length = 512
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVIN---HENGNVACYIPSIGGTNSVLGLCWLKKYPSKLV 499
+++PS P++ A + D V V + +VA P+ +V+ W K+ L+
Sbjct: 327 IQWSPSEPTVFASCSADRTVQVWDVRSRGRQSVAGIDPAHEADVNVI--SWNKRTDYLLL 384
Query: 500 AGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ-LTSVHVNSTDDQ-FLASGYSKN 557
+G D G +R++DL ++ K A + VA++ +Q +TS+ + T+D F+AS
Sbjct: 385 SGGDEGGIRVWDLRNVKKKGTSASAPTPVASFSWHQQPITSIEWHPTEDSIFVASSADNQ 444
Query: 558 VALYDINTEK 567
V L+D+ E+
Sbjct: 445 VTLWDLGVEQ 454
>gi|358367458|dbj|GAA84077.1| ribosome biogenesis protein [Aspergillus kawachii IFO 4308]
Length = 493
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V V + + + + V + W + L
Sbjct: 309 EELQWSPNEKNVFASASSDGSVKVWDVRSKSRKPAVDVKVSNTDVNVMSWSNQTFHLLAT 368
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDF--EQLTSVHVNSTDDQFLASGYSKN- 557
G+D G ++DL H P A ++ +S +DF E +TS+ + TDD +A G + N
Sbjct: 369 GADDGQWAVWDLRHWKPNAAGSQTTASPVASFDFHREPVTSIEWHPTDDSVVAVGSADNT 428
Query: 558 VALYDINTE 566
V L+D+ E
Sbjct: 429 VTLWDLAVE 437
>gi|348513125|ref|XP_003444093.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
[Oreochromis niloticus]
Length = 347
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 18/155 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G I + G S + C+ ++ P +
Sbjct: 104 ELHYN-TDGSMLFSASTDKTVGVWDSETGE---RIKRLKGHTSFVNTCYPARRGPQLICT 159
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R ++ T+ + Q+ +V N T DQ L+ G ++ +
Sbjct: 160 GSDDGTVKLWDI----------RKKGAIHTFQNTYQVLAVTFNDTSDQILSGGIDNDIKV 209
Query: 561 YDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLL 595
+D+ K L +MH +V S S LL
Sbjct: 210 WDLRQNK---LIYNMHGHGDSVTGLSLSSEGSYLL 241
>gi|281340485|gb|EFB16069.1| hypothetical protein PANDA_010591 [Ailuropoda melanoleuca]
Length = 425
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG++AWP LH ++S+ K R ++P++PS +A G
Sbjct: 70 RALHQHKLGNTAWPSLQQGLQQAFLHSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAVG 129
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG S+ GL + ++ S G RL D
Sbjct: 130 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLDTNQFFTSSMEGTTRLQDF 185
>gi|301772516|ref|XP_002921700.1| PREDICTED: DNA damage-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 426
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG++AWP LH ++S+ K R ++P++PS +A G
Sbjct: 70 RALHQHKLGNTAWPSLQQGLQQAFLHSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAVG 129
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG S+ GL + ++ S G RL D
Sbjct: 130 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLDTNQFFTSSMEGTTRLQDF 185
>gi|327259685|ref|XP_003214666.1| PREDICTED: DNA damage-binding protein 2-like [Anolis carolinensis]
Length = 445
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
E++P++PS +A G+ G++I+ ++E N C+I +G ++ G+ + PS+L S
Sbjct: 66 LEWHPTHPSTVAVGSKGGDIILWDYEVLNKTCFIEGMGAGGAITGMKFNPFNPSELYTSS 125
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYD 562
+G L D N ++ + +DF SV V++T + N L
Sbjct: 126 VAGTTALQDFNGNTVRIFTNTND------WDF-WYCSVDVSATCRTVVTGDNVGNAILLS 178
Query: 563 INTEKPLQLFTDMHREPINVAKFS 586
+ EK L +H++ + +F+
Sbjct: 179 TDGEKIWDL--KLHKKKVTHVEFN 200
>gi|432883260|ref|XP_004074235.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
[Oryzias latipes]
Length = 347
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 18/155 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ SL+ + D V + + E G I + G S + C+ ++ P +
Sbjct: 104 ELHYN-TDGSLLFSASTDKTVGIWDSETGE---RIKRLKGHTSFVNTCYPARRGPQLVCT 159
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G ++L+D+ R +++ T+ + Q+ +V N T DQ L+ G ++ +
Sbjct: 160 GSDDGTIKLWDI----------RKKAAIHTFQNTYQVLAVTFNDTSDQILSGGIDNDIKV 209
Query: 561 YDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLL 595
+D+ K L +MH +V S S LL
Sbjct: 210 WDLRQNK---LIYNMHGHSDSVTGLSLSSEGSYLL 241
>gi|345783629|ref|XP_540746.3| PREDICTED: DNA damage-binding protein 2 [Canis lupus familiaris]
Length = 427
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG +AWP LH ++S+ K R ++P++PS +A G
Sbjct: 71 RALHHHKLGKAAWPSLQQGLQQSFLHSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG S+ GL + ++ S G RL D
Sbjct: 131 SKGGDIMLWNFGMKDKPTFIKGIGAGGSITGLKFNPLDTNQFFTSSMEGTTRLQDF 186
>gi|405113037|ref|NP_001258275.1| damage specific DNA binding protein 2 [Rattus norvegicus]
gi|149022624|gb|EDL79518.1| rCG26646, isoform CRA_a [Rattus norvegicus]
Length = 432
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R L KLG + WP LH ++S+ K R ++P++PS +A G
Sbjct: 71 RDLYQQKLGKATWPSLQQGLQKSFLHSLASYRVFQKAAPFDRRTTSLAWHPTHPSTLAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + ++ IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDIMIWNFGIKDKPIFLKGIGAGGSITGLKFNHLNTNQFFASSMEGTTRLQDF 186
>gi|354469908|ref|XP_003497354.1| PREDICTED: DNA damage-binding protein 2 [Cricetulus griseus]
Length = 425
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R L KLG + WP LH ++S+ K R ++P++PS +A G
Sbjct: 71 RDLYQHKLGKANWPSLQQGLQKSFLHSLASYRVFQKAAPFDRRTTSLAWHPTHPSTVAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDIMIWNFGIKDKPIFIKGIGAGGSITGLKFSHLNSNQFFASSMEGTTRLQDF 186
>gi|260831812|ref|XP_002610852.1| hypothetical protein BRAFLDRAFT_229150 [Branchiostoma floridae]
gi|229296221|gb|EEN66862.1| hypothetical protein BRAFLDRAFT_229150 [Branchiostoma floridae]
Length = 358
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 72/181 (39%), Gaps = 37/181 (20%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
E++PS+P+L+A G+ G++I+ N E + C+I IG V L + S++
Sbjct: 39 IEWHPSHPTLVAAGSKGGDIILWNFEKVGMDCFIQGIGPGGYVSALKFSPWNESQVYTAQ 98
Query: 503 DSGCVRLFDLN----------------------HIPPKVADARGNSSVATYYDFE----- 535
G V L D N + P K+ A + D E
Sbjct: 99 LDGTVNLLDFNGRNNRNFLSTHSWSNWYCAADVNTPHKMLVAGESQGHVVMMDTEGEKLW 158
Query: 536 -------QLTSVHVNSTDDQFLASGYS-KNVALYDIN--TEKPLQLFTDMHREPINVAKF 585
++T V N+ D L + + + V L+DI K L+T H PIN A F
Sbjct: 159 QHRLHKSKVTHVEFNTGCDWLLVTASTDRTVKLWDIRMVEGKGSALYTLEHDHPINSAYF 218
Query: 586 S 586
S
Sbjct: 219 S 219
>gi|410973679|ref|XP_003993275.1| PREDICTED: DNA damage-binding protein 2 [Felis catus]
Length = 426
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG +AWP +H ++S+ K R ++P++PS +A G
Sbjct: 71 RALHHHKLGKAAWPSLQQGLQQSFVHSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG SV GL + ++ S G RL D
Sbjct: 131 SKGGDIMLWNFGIKDKPTFIKGIGAGGSVTGLKFNPLDTNQFFTSSMEGTTRLQDF 186
>gi|119588359|gb|EAW67953.1| damage-specific DNA binding protein 2, 48kDa, isoform CRA_b [Homo
sapiens]
Length = 284
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 71 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF 186
>gi|154285290|ref|XP_001543440.1| chromatin assembly factor 1 subunit C [Ajellomyces capsulatus NAm1]
gi|150407081|gb|EDN02622.1| chromatin assembly factor 1 subunit C [Ajellomyces capsulatus NAm1]
Length = 496
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 22/157 (14%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V++ + GNV+ + +G T GL W L
Sbjct: 212 YQPQNPNVIATMCTDGRVMIWDRSKHPSLPTGNVSPELELLGHTKEGFGLSWSPHLVGHL 271
Query: 499 VAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGY---- 554
V GS+ VRL+D+ +GN ++ + +S+ VN L S +
Sbjct: 272 VTGSEDKTVRLWDITQ------HTKGNKALRPSRTYTHHSSI-VNDVQYHPLHSSFIGTV 324
Query: 555 SKNVALYDI-----NTEKPLQLFTDMHREPINVAKFS 586
S ++ L I +T + + D H++ IN F+
Sbjct: 325 SDDITLQIIDDREADTTRAAAVSRDQHKDAINAIAFN 361
>gi|432090397|gb|ELK23823.1| DNA damage-binding protein 2 [Myotis davidii]
Length = 427
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG +AWP LH ++S+ K R ++P++PS +A G
Sbjct: 71 RALHHHKLGRTAWPSLQKDLQQSFLHSLASYRISQKAAPFDRRATSLTWHPTHPSTLAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ S G RL D
Sbjct: 131 SKGGDIMLWNLGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFFTSSMEGTTRLQDF---- 186
Query: 517 PKVADARGNS-SVATYYD 533
+GN+ V T YD
Sbjct: 187 ------KGNTLQVYTSYD 198
>gi|344247837|gb|EGW03941.1| DNA damage-binding protein 2 [Cricetulus griseus]
Length = 294
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R L KLG + WP LH ++S+ K R ++P++PS +A G
Sbjct: 58 RDLYQHKLGKANWPSLQQGLQKSFLHSLASYRVFQKAAPFDRRTTSLAWHPTHPSTVAVG 117
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 118 SKGGDIMIWNFGIKDKPIFIKGIGAGGSITGLKFSHLNSNQFFASSMEGTTRLQDF 173
>gi|431915754|gb|ELK16087.1| DNA damage-binding protein 2 [Pteropus alecto]
Length = 427
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 87/227 (38%), Gaps = 46/227 (20%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L K+G +AWP L ++S+ K R ++P++PS +A G
Sbjct: 71 RALYHHKVGKAAWPSLQQSLQHSFLQSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ G++++ N + +I IG S+ GL + ++ S G RL D
Sbjct: 131 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFFTSSMEGMTRLQDFKGNT 190
Query: 517 PKV-------------ADARGNSSVATYYD---------------------FEQLTSVHV 542
+V D S V D +++T + +
Sbjct: 191 LQVFASYSICNFWFCSLDVSAKSRVVVTGDNVGNVILLSMDGKELWNLRMHKKKVTHLAL 250
Query: 543 NSTDDQFLASG-YSKNVALYDINTEKPLQ--LFTDMHREPINVAKFS 586
N D FLA+ + V ++D+ K L++ HR P+N A FS
Sbjct: 251 NPCCDWFLATASVDQTVKIWDLRQVKGKSSFLYSLPHRHPVNAAHFS 297
>gi|126330274|ref|XP_001367385.1| PREDICTED: u5 small nuclear ribonucleoprotein 40 kDa protein
[Monodelphis domestica]
Length = 361
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G I + G S + C+ ++ P +
Sbjct: 118 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RIKRLKGHTSFVNSCYPARRGPQLVCT 173
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R ++V T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 174 GSDDGTVKLWDI----------RKKAAVQTFQNTYQVLTVTFNDTSDQIISGGIDNDIKV 223
Query: 561 YDINTEK 567
+D+ K
Sbjct: 224 WDLRQNK 230
>gi|395526790|ref|XP_003765539.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein
[Sarcophilus harrisii]
Length = 361
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G I + G S + C+ ++ P +
Sbjct: 118 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RIKRLKGHTSFVNSCYPARRGPQLVCT 173
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R ++V T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 174 GSDDGTVKLWDI----------RKKAAVQTFQNTYQVLTVTFNDTSDQIISGGIDNDIKV 223
Query: 561 YDINTEK 567
+D+ K
Sbjct: 224 WDLRQNK 230
>gi|45476309|dbj|BAD12560.1| damage-specific DNA binding protein 2 splicing variant D4 [Homo
sapiens]
gi|119588360|gb|EAW67954.1| damage-specific DNA binding protein 2, 48kDa, isoform CRA_c [Homo
sapiens]
Length = 244
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG ++WP LH + S+ + K R ++P++PS +A G
Sbjct: 71 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF 186
>gi|401411297|ref|XP_003885096.1| hypothetical protein NCLIV_054930 [Neospora caninum Liverpool]
gi|325119515|emb|CBZ55068.1| hypothetical protein NCLIV_054930 [Neospora caninum Liverpool]
Length = 3033
Score = 47.4 bits (111), Expect = 0.023, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 535 EQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSP 590
+QL+S+ V+ TDD L SG+S +++L+DI T + L +H IN +FS SP
Sbjct: 2469 QQLSSLSVSCTDDFLLLSGFSPDLSLHDIATGQRLGTLQRLHSGSINTVRFSSCSP 2524
Score = 40.0 bits (92), Expect = 3.2, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 23/136 (16%)
Query: 390 SKPKQPNIHRTQHFFSRSLSAA---KLGSSAWPLL-HPVSSF-SHIYKEGNKR------- 437
++P + ++ SRS+ +A + GSS PL +P ++ S + +E +R
Sbjct: 2181 TRPAGSTVENSRDAPSRSVPSAGNGEEGSSGEPLAAYPRATRDSSVSRENLERRSLACSR 2240
Query: 438 ------VRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIG-GTNSVLGLCW 490
RQFE++P P ++ G DG + +I+ C + + + +LGL W
Sbjct: 2241 RLLRSTADARQFEFHPDLPDVILSGHKDGSIQIIDSRRD---CAVAGLAVDSGPILGLTW 2297
Query: 491 LKKYPSKLV-AGSDSG 505
L +P +LV A S +G
Sbjct: 2298 LHHHPGRLVCAASATG 2313
>gi|225557051|gb|EEH05338.1| chromatin assembly factor 1 subunit C [Ajellomyces capsulatus
G186AR]
Length = 435
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V+V + GNV+ + +G T GL W L
Sbjct: 145 YQPQNPNVIATMCTDGRVMVWDRSKHPSLPTGNVSPELELLGHTKEGFGLSWSPHLVGHL 204
Query: 499 VAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQF------LAS 552
V GS+ VRL+D+ +GN ++ + +S+ VN D Q+ L
Sbjct: 205 VTGSEDKTVRLWDITQ------HTKGNKALRPSRTYTHHSSI-VN--DVQYHPLHSSLIG 255
Query: 553 GYSKNVALYDI-----NTEKPLQLFTDMHREPINVAKFS 586
S ++ L I +T + + D H++ IN F+
Sbjct: 256 TVSDDITLQIIDDREADTTRAAAVSRDQHKDAINAIAFN 294
>gi|395334823|gb|EJF67199.1| glutamate-rich WD repeat containing [Dichomitus squalens LYAD-421
SS1]
Length = 515
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVIN-HENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAG 501
+++PS P++ A + D V V + G + + + V + W + L++G
Sbjct: 329 LQWSPSEPTVFASCSADQSVRVWDVRAKGRQSVAGIARAHESDVNVISWNRATTYLLLSG 388
Query: 502 SDSGCVRLFDLNHIPPKVADARGNSSVATY-YDFEQLTSVHVNSTDDQ-FLASGYSKNVA 559
D G ++++DL ++ K A S VA + + +TS+ + T+D F ASG V
Sbjct: 389 GDEGGIKVWDLRNV-KKAGTAPDPSPVAAFTWHTAPITSIEWHPTEDSIFAASGADDQVT 447
Query: 560 LYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLH 597
L+D+ E+ D P++ + P LL +H
Sbjct: 448 LWDLAVEQ-----DDEEAGPMDATEGGREVPPQLLFVH 480
>gi|426245393|ref|XP_004016496.1| PREDICTED: DNA damage-binding protein 2 isoform 1 [Ovis aries]
Length = 427
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG++AWP L+ ++S+ K R ++P++PS +A G
Sbjct: 71 RALHQHKLGTAAWPSLQQGLQQSFLNSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG S+ GL + ++ S G RL D
Sbjct: 131 SKGGDILLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFFTSSMEGTTRLQDF 186
>gi|225707406|gb|ACO09549.1| WD repeat protein 57 [Osmerus mordax]
Length = 347
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 18/155 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G I + G S + C+ ++ P +
Sbjct: 104 ELHYN-TDGSMLFSASTDKTVGVWDSETGE---RIKRLKGHTSFVNSCYPARRGPQLVCT 159
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +V T+ + Q+ +V N T DQ L+ G ++ +
Sbjct: 160 GSDDGTVKLWDI----------RKKGAVHTFQNTYQVLAVTFNDTSDQILSGGIDNDIKV 209
Query: 561 YDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLL 595
+D+ K L MH ++ S S LL
Sbjct: 210 WDLRQNK---LIYSMHGHGDSLTGLSLSSEGSYLL 241
>gi|354472333|ref|XP_003498394.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
[Cricetulus griseus]
Length = 435
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 192 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 247
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 248 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 297
Query: 561 YDINTEK 567
+D+ K
Sbjct: 298 WDLRQNK 304
>gi|12832304|dbj|BAB22049.1| unnamed protein product [Mus musculus]
Length = 370
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R ++V T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKRAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|387018104|gb|AFJ51170.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Crotalus
adamanteus]
Length = 359
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 116 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 171
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R ++V T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 172 GSDDGTVKLWDI----------RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 221
Query: 561 YDINTEK 567
+D+ K
Sbjct: 222 WDLRQNK 228
>gi|3820594|gb|AAC69625.1| U5 snRNP-specific 40 kDa protein [Homo sapiens]
Length = 357
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ +K P +
Sbjct: 114 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARKSPQLVCT 169
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 170 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 561 YDINTEK 567
+D+ K
Sbjct: 220 WDLRQNK 226
>gi|115298670|ref|NP_079921.2| U5 small nuclear ribonucleoprotein 40 kDa protein [Mus musculus]
gi|67462046|sp|Q6PE01.1|SNR40_MOUSE RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa protein;
Short=U5 snRNP 40 kDa protein; AltName: Full=WD
repeat-containing protein 57
gi|37231578|gb|AAH58365.1| Small nuclear ribonucleoprotein 40 (U5) [Mus musculus]
gi|74143882|dbj|BAE41255.1| unnamed protein product [Mus musculus]
gi|148698191|gb|EDL30138.1| WD repeat domain 57 (U5 snRNP specific) [Mus musculus]
Length = 358
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R ++V T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|41053421|ref|NP_956616.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Danio rerio]
gi|30353880|gb|AAH51783.1| Small nuclear ribonucleoprotein 40 (U5) [Danio rerio]
Length = 347
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ SL+ + D V V + E G + + G S + C+ ++ P
Sbjct: 104 ELHYN-TDGSLLFSASTDKTVCVWDSETGE---RVKRLKGHTSFVNSCFPARRGPQLACT 159
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +SV T+ + Q+ SV N T DQ ++ G ++ +
Sbjct: 160 GSDDGTVKLWDI----------RKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKV 209
Query: 561 YDINTEK 567
+D+ K
Sbjct: 210 WDLRQNK 216
>gi|242792201|ref|XP_002481905.1| chromatin assembly factor 1 subunit C, putative [Talaromyces
stipitatus ATCC 10500]
gi|218718493|gb|EED17913.1| chromatin assembly factor 1 subunit C, putative [Talaromyces
stipitatus ATCC 10500]
Length = 436
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 22/157 (14%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V++ + G V + +G T GL W KL
Sbjct: 146 YQPQNPNIIATMCTDGRVMIWDRSKHPSIPTGTVNPQLELLGHTKEGFGLSWSPHAEGKL 205
Query: 499 VAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNV 558
V GS+ VRL+D+ +GN ++ + +S+ VN L S V
Sbjct: 206 VTGSEDKTVRLWDMETY------TKGNKAIRPISTYTHHSSI-VNDVQYHPLHSSLIGTV 258
Query: 559 A------LYDI---NTEKPLQLFTDMHREPINVAKFS 586
+ + DI +T K + HR+ IN F+
Sbjct: 259 SDDITLQIIDIRESDTTKAAAVAEGQHRDAINAIAFN 295
>gi|406866810|gb|EKD19849.1| glutamate-rich WD repeat containing protein 1 [Marssonina brunnea
f. sp. 'multigermtubi' MB_m1]
Length = 491
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVIN-HENGNVACYIPSIGGTNSVLGLCWLKKYPSKLV 499
+ +++PS ++ A + DG + V + A I T+ V + W ++ L
Sbjct: 307 EELQWSPSERNVFASASSDGTIKVWDIRSKSKTAALSVQISDTD-VNVMSWSRQTSHLLA 365
Query: 500 AGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDF--EQLTSVHVNSTDDQFLA-SGYSK 556
+G+D G ++DL P + + + +DF EQ+TSV + TDD +A +
Sbjct: 366 SGADDGVWAVWDLRQWKPNTSASSPKPTPVASFDFHKEQITSVEWHPTDDSIVAVAAGDD 425
Query: 557 NVALYDIN--------------TEKPLQLFTDMHREPINVAKFSHHSPLCLL 594
+ L+D+ TE P QL + E + F P CL+
Sbjct: 426 TLTLWDLAVELDDEESKDTGGVTEVPPQLLFVHYMEKVKELHFHPQIPGCLV 477
>gi|410910804|ref|XP_003968880.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
[Takifugu rubripes]
Length = 347
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 18/155 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ SL+ + D V V + E G I + G S + C+ ++ P +
Sbjct: 104 ELHYN-TDGSLLFSASTDKTVGVWDSETGE---RIKRLKGHTSFVNTCYPARRGPQLICT 159
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R ++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 160 GSDDGTVKLWDI----------RKKGAIHTFQNTYQVLAVTFNDTSDQIMSGGIDNDIKV 209
Query: 561 YDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLL 595
+D+ K L +M +V S S LL
Sbjct: 210 WDLRQNK---LIYNMQGHGDSVTGLSLSSEGSYLL 241
>gi|410966658|ref|XP_003989847.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Felis
catus]
Length = 354
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|261202578|ref|XP_002628503.1| chromatin assembly factor 1 subunit C [Ajellomyces dermatitidis
SLH14081]
gi|239590600|gb|EEQ73181.1| chromatin assembly factor 1 subunit C [Ajellomyces dermatitidis
SLH14081]
gi|239612326|gb|EEQ89313.1| chromatin assembly factor 1 subunit C [Ajellomyces dermatitidis
ER-3]
gi|327353278|gb|EGE82135.1| chromatin assembly factor 1 subunit C [Ajellomyces dermatitidis
ATCC 18188]
Length = 435
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 22/157 (14%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V++ + GNV+ + +G T GL W L
Sbjct: 145 YQPQNPNVIATMCTDGRVMIWDRSRHPSLPTGNVSPELELLGHTKEGFGLSWSPHLIGHL 204
Query: 499 VAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNV 558
GS+ VRL+D+ +GN ++ + +S+ VN L S V
Sbjct: 205 ATGSEDKTVRLWDITQ------HTKGNKALKPSRTYTHHSSI-VNDVQHHPLHSSLIGTV 257
Query: 559 A---------LYDINTEKPLQLFTDMHREPINVAKFS 586
+ + + +T + + D H++ IN F+
Sbjct: 258 SDDITLQILDIREADTTRASSVSKDQHKDAINAIAFN 294
>gi|114052052|ref|NP_001039847.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Bos taurus]
gi|110288017|sp|Q2HJH6.1|SNR40_BOVIN RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa protein;
Short=U5 snRNP 40 kDa protein; AltName: Full=WD
repeat-containing protein 57
gi|88682876|gb|AAI05384.1| Small nuclear ribonucleoprotein 40kDa (U5) [Bos taurus]
Length = 358
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|318065137|ref|NP_001187399.1| u5 small nuclear ribonucleoprotein 40 kda protein [Ictalurus
punctatus]
gi|308322909|gb|ADO28592.1| u5 small nuclear ribonucleoprotein 40 kda protein [Ictalurus
punctatus]
Length = 347
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ SL+ + D V V + E G + + G S + C+ ++ P
Sbjct: 104 ELHYN-TDGSLLFSASTDKTVCVWDSETGE---RVKRLKGHTSFVNSCFPARRGPQLACT 159
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +S+ T+ + Q+ SV N T DQ ++ G ++ +
Sbjct: 160 GSDDGTVKLWDI----------RKKASIHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKV 209
Query: 561 YDINTEK 567
+D+ K
Sbjct: 210 WDLRQNK 216
>gi|57529443|ref|NP_001006308.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Gallus gallus]
gi|53130594|emb|CAG31626.1| hypothetical protein RCJMB04_8n22 [Gallus gallus]
Length = 388
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 145 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 200
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R ++V T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 201 GSDDGTVKLWDI----------RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 250
Query: 561 YDINTEK 567
+D+ K
Sbjct: 251 WDLRQNK 257
>gi|440896926|gb|ELR48717.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Bos grunniens
mutus]
Length = 359
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 116 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 171
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 172 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 221
Query: 561 YDINTEK 567
+D+ K
Sbjct: 222 WDLRQNK 228
>gi|209732786|gb|ACI67262.1| WD repeat-containing protein 57 [Salmo salar]
gi|303668496|gb|ADM16305.1| WD repeat-containing protein 57 [Salmo salar]
Length = 348
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ SL+ + D V V + E G I + G S + C+ ++ P +
Sbjct: 105 ELHYN-TDGSLLFSASTDKTVGVWDSETGE---RIKRLKGHTSFVNSCYPARRGPQLVCT 160
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +V T+ + Q+ +V N T DQ L+ G ++ +
Sbjct: 161 GSDDGTVKLWDV----------RKKGAVHTFQNTYQVLAVTFNDTSDQILSGGIDNDIKV 210
Query: 561 YDINTEK 567
+D+ K
Sbjct: 211 WDLRQNK 217
>gi|335290872|ref|XP_003356314.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
[Sus scrofa]
gi|426221800|ref|XP_004005095.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Ovis
aries]
gi|296490189|tpg|DAA32302.1| TPA: U5 small nuclear ribonucleoprotein 40 kDa protein [Bos taurus]
gi|431891159|gb|ELK02036.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Pteropus alecto]
Length = 358
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|344287512|ref|XP_003415497.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein
[Loxodonta africana]
Length = 355
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 112 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 167
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 168 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 217
Query: 561 YDINTEK 567
+D+ K
Sbjct: 218 WDLRQNK 224
>gi|301777189|ref|XP_002924017.1| PREDICTED: LOW QUALITY PROTEIN: u5 small nuclear ribonucleoprotein
40 kDa protein-like [Ailuropoda melanoleuca]
Length = 358
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|73950485|ref|XP_854730.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Canis
lupus familiaris]
Length = 358
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|395856797|ref|XP_003800805.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein
[Otolemur garnettii]
Length = 358
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|355721019|gb|AES07126.1| small nuclear ribonucleoprotein 40kDa [Mustela putorius furo]
Length = 357
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|355683074|gb|AER97037.1| damage-specific DNA binding protein 2, 48kDa [Mustela putorius
furo]
Length = 319
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG++ WP LH ++S+ K R ++P++PS +A G
Sbjct: 70 RALHHHKLGNAVWPSLQQGLQQAFLHSLASYRIFQKAAPFDRRATSLTWHPTHPSTLAVG 129
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG S+ GL + ++ S G RL D
Sbjct: 130 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLDTNQFFTSSMEGTTRLQDF 185
>gi|71896295|ref|NP_001025544.1| small nuclear ribonucleoprotein 40kDa (U5) [Xenopus (Silurana)
tropicalis]
gi|60649675|gb|AAH90576.1| wdr57 protein [Xenopus (Silurana) tropicalis]
Length = 337
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ SL+ + D V + + E G + + G S + C+ ++ P +
Sbjct: 94 ELHYN-TDGSLLFSASTDKTVAIWDCETGE---RVKRLKGHTSFVNSCYPARRGPQLICT 149
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D R ++V T+ + Q+ SV N T DQ ++ G ++ +
Sbjct: 150 GSDDGTVKLWDF----------RKKAAVQTFQNTYQVLSVTFNDTSDQIISGGIDNDIKV 199
Query: 561 YDINTEK 567
+D+ K
Sbjct: 200 WDLRQNK 206
>gi|197381061|ref|NP_001128028.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Rattus
norvegicus]
gi|149024095|gb|EDL80592.1| similar to U5 snRNP-specific protein (Prp8-binding) (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 358
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|115495241|ref|NP_001069256.1| DNA damage-binding protein 2 [Bos taurus]
gi|122143457|sp|Q0VBY8.1|DDB2_BOVIN RecName: Full=DNA damage-binding protein 2; AltName:
Full=Damage-specific DNA-binding protein 2
gi|111305280|gb|AAI20441.1| Damage-specific DNA binding protein 2, 48kDa [Bos taurus]
gi|296479658|tpg|DAA21773.1| TPA: DNA damage-binding protein 2 [Bos taurus]
Length = 426
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG++AWP L+ ++S+ K R ++P++PS +A G
Sbjct: 70 RALHQHKLGTAAWPSLQQGLQQSFLNSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAVG 129
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG S+ G+ + ++ S G RL D
Sbjct: 130 SKGGDILLWNFGIKDKPTFIKGIGAGGSITGMKFNPLNTNQFFTSSMEGTTRLQDF 185
>gi|308321895|gb|ADO28085.1| u5 small nuclear ribonucleoprotein 40 kda protein [Ictalurus
furcatus]
Length = 347
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ SL+ + D V V + E G + + G S + C+ ++ P
Sbjct: 104 ELHYN-TDGSLLFSASTDKTVCVWDSETGE---RVKRLKGHTSFVNSCFPARRGPQLACT 159
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +S+ T+ + Q+ SV N T DQ ++ G ++ +
Sbjct: 160 GSDDGTVKLWDI----------RKKASIHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKV 209
Query: 561 YDINTEK 567
+D+ K
Sbjct: 210 WDLRQNK 216
>gi|348678917|gb|EGZ18734.1| hypothetical protein PHYSODRAFT_315332 [Phytophthora sojae]
Length = 491
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 309 YISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHK 368
Y+ +P +E +REY+IASLPQLE+LD I R DR A VF+ E Y R+
Sbjct: 122 YMLGNPCQSNWETGFREYVIASLPQLEILDGKEIHRSDRIKALQVFS---ERQRYVRREA 178
Query: 369 ESV 371
E V
Sbjct: 179 EKV 181
>gi|326932858|ref|XP_003212529.1| PREDICTED: u5 small nuclear ribonucleoprotein 40 kDa protein-like
[Meleagris gallopavo]
Length = 331
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 88 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 143
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R ++V T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 144 GSDDGTVKLWDI----------RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 193
Query: 561 YDINTEK 567
+D+ K
Sbjct: 194 WDLRQNK 200
>gi|212535158|ref|XP_002147735.1| chromatin assembly factor 1 subunit C, putative [Talaromyces
marneffei ATCC 18224]
gi|210070134|gb|EEA24224.1| chromatin assembly factor 1 subunit C, putative [Talaromyces
marneffei ATCC 18224]
Length = 436
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 26/159 (16%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V++ + G V + +G T GL W KL
Sbjct: 146 YQPQNPNIIATMCTDGRVMIWDRSKHPSIPTGTVNPQLELLGHTKEGFGLSWSPHAEGKL 205
Query: 499 VAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQF------LAS 552
V GS+ VRL+D+ +GN ++ + +S+ VN D Q+ L
Sbjct: 206 VTGSEDKTVRLWDIETY------TKGNKAIRPTRTYTHHSSI-VN--DVQYHPLHASLIG 256
Query: 553 GYSKNVALY-----DINTEKPLQLFTDMHREPINVAKFS 586
S ++ L D +T + + HR+ IN F+
Sbjct: 257 TVSDDITLQIIDIRDSDTTRAAAVAEGQHRDAINAIAFN 295
>gi|444707365|gb|ELW48647.1| U5 small nuclear ribonucleoprotein 40 kDa protein, partial [Tupaia
chinensis]
Length = 323
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|254577519|ref|XP_002494746.1| ZYRO0A08690p [Zygosaccharomyces rouxii]
gi|238937635|emb|CAR25813.1| ZYRO0A08690p [Zygosaccharomyces rouxii]
Length = 516
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 10/158 (6%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++P+ ++ A DG V + + + I + V + W +K L +G
Sbjct: 332 IQWSPTESTVFATSGTDGYVRIWDTRSKKHKPAISTRASNTDVNVISWNEKLGYLLASGD 391
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQFLASGYSKN-VA 559
D+G ++DL P A++ G VA YDF + +TS+ N DD +A N V
Sbjct: 392 DNGSWGVWDLRQFSP--ANSEGVQPVAQ-YDFHRGPITSISFNPLDDSVVAVASEDNTVT 448
Query: 560 LYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLH 597
L+D++ E +E + K P LL +H
Sbjct: 449 LWDLSVEADDDEIQQQTKEYKELQKI----PPQLLFVH 482
>gi|348571008|ref|XP_003471288.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
[Cavia porcellus]
Length = 358
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|440903455|gb|ELR54110.1| DNA damage-binding protein 2 [Bos grunniens mutus]
Length = 427
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R+L KLG++AWP L+ ++S+ K R ++P++PS +A G
Sbjct: 70 RALHQHKLGTAAWPSLQQGLQQSFLNSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAVG 129
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG S+ G+ + ++ S G RL D
Sbjct: 130 SKGGDILLWNFGIKDKPTFIKGIGAGGSITGMKFNPLNTNQFFTSSMEGTTRLQDF 185
>gi|324507138|gb|ADY43033.1| E3 ubiquitin-protein ligase RFWD2 [Ascaris suum]
Length = 646
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 20/151 (13%)
Query: 431 YKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW 490
Y+E KR QF N +P LMA G+ D +V + + + S+G ++ + +C
Sbjct: 428 YQEHEKRCWTVQF--NNVDPQLMASGSDDAKVKLWSLLSDR------SVGSIDAKVNVCC 479
Query: 491 LKKYPSK---LVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDD 547
+ P+ LV GS CV L+DL + V RG+ +Y + V STD
Sbjct: 480 VYFSPTSRHSLVFGSADHCVHLYDLRNTSKAVNVFRGHRKAVSYVKYCNENEVVSASTD- 538
Query: 548 QFLASGYSKNVALYDINTEKPLQLFTDMHRE 578
N+ L+D+NT K ++ E
Sbjct: 539 --------SNLRLWDVNTGKCIRTMKGHQNE 561
>gi|68068391|ref|XP_676105.1| RNA binding protein [Plasmodium berghei strain ANKA]
gi|56495644|emb|CAI00666.1| RNA binding protein, putative [Plasmodium berghei]
Length = 662
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 480 GGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTS 539
G TNS+L L S L GS VRL+D+N P +AT D
Sbjct: 116 GHTNSILCLA-FSPNSSHLATGSGDNTVRLWDINSQTP----------IATLKDHTDWVL 164
Query: 540 VHVNSTDDQFLAS-GYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLHL 598
+ S D++FLA+ G KNV +YD +T K L + T +E + LC LHL
Sbjct: 165 SVLFSPDNKFLATTGMDKNVCIYDTHTGKLLNILTGHKKEV---------TTLCFEPLHL 215
>gi|449273160|gb|EMC82768.1| U5 small nuclear ribonucleoprotein 40 kDa protein, partial [Columba
livia]
Length = 317
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 74 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 129
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R ++V T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 130 GSDDGTVKLWDI----------RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 179
Query: 561 YDINTEK 567
+D+ K
Sbjct: 180 WDLRQNK 186
>gi|3746838|gb|AAC64084.1| 38kDa splicing factor [Homo sapiens]
Length = 310
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 55 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 110
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R ++V T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 111 GSDDGTVKLWDI----------RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 160
Query: 561 YDINTEK 567
+D+ K
Sbjct: 161 WDLRQNK 167
>gi|403293265|ref|XP_003937641.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein
[Saimiri boliviensis boliviensis]
Length = 358
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|355557759|gb|EHH14539.1| hypothetical protein EGK_00483 [Macaca mulatta]
Length = 357
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 114 ELHYN-TDGSMLFSASTDKTVAVWDSETGK---RVKRLKGHTSFVNSCYPARRGPQLVCT 169
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 170 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 561 YDINTEK 567
+D+ K
Sbjct: 220 WDLRQNK 226
>gi|90085014|dbj|BAE91248.1| unnamed protein product [Macaca fascicularis]
Length = 357
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 114 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 169
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 170 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 561 YDINTEK 567
+D+ K
Sbjct: 220 WDLRQNK 226
>gi|332808260|ref|XP_003307985.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein
isoform 1 [Pan troglodytes]
Length = 357
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 114 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 169
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 170 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 561 YDINTEK 567
+D+ K
Sbjct: 220 WDLRQNK 226
>gi|70925906|ref|XP_735575.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56509354|emb|CAH75884.1| hypothetical protein PC000134.01.0 [Plasmodium chabaudi chabaudi]
Length = 205
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 480 GGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTS 539
G TNS+L L + S L GS VRL+D+N P +AT D
Sbjct: 59 GHTNSILCLAF-SPNSSHLATGSGDNTVRLWDINTQTP----------IATLKDHTDWVL 107
Query: 540 VHVNSTDDQFLAS-GYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLHL 598
+ S D++FLA+ G KNV +YD +T K L + T +E + LC LHL
Sbjct: 108 SVLFSPDNKFLATTGMDKNVCIYDTHTGKLLNILTGHKKEV---------TTLCFEPLHL 158
>gi|147899844|ref|NP_001079824.1| small nuclear ribonucleoprotein 40kDa (U5) [Xenopus laevis]
gi|32822805|gb|AAH54992.1| MGC64565 protein [Xenopus laevis]
Length = 337
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ SL+ + D V + + E G + + G S + C+ ++ P +
Sbjct: 94 ELHYN-TDGSLLFSASTDRTVAIWDCETGE---RVKRLKGHTSFVNSCYPARRGPQLICT 149
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D R ++V T+ + Q+ SV N T DQ ++ G ++ +
Sbjct: 150 GSDDGTVKLWDF----------RKKAAVQTFQNTYQVLSVTFNDTSDQIISGGIDNDIKV 199
Query: 561 YDINTEK 567
+D+ K
Sbjct: 200 WDLRQNK 206
>gi|291399419|ref|XP_002716107.1| PREDICTED: WD repeat domain 57 (U5 snRNP specific) [Oryctolagus
cuniculus]
Length = 358
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|149694963|ref|XP_001503962.1| PREDICTED: u5 small nuclear ribonucleoprotein 40 kDa protein-like
[Equus caballus]
Length = 358
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|115298668|ref|NP_004805.2| U5 small nuclear ribonucleoprotein 40 kDa protein [Homo sapiens]
gi|307548876|ref|NP_001182579.1| uncharacterized protein LOC705059 [Macaca mulatta]
gi|332254534|ref|XP_003276384.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein
isoform 1 [Nomascus leucogenys]
gi|397515873|ref|XP_003828166.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Pan
paniscus]
gi|402853687|ref|XP_003891522.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Papio
anubis]
gi|67462075|sp|Q96DI7.1|SNR40_HUMAN RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa protein;
Short=U5 snRNP 40 kDa protein; Short=U5-40K; AltName:
Full=38 kDa-splicing factor; AltName: Full=Prp8-binding
protein; Short=hPRP8BP; AltName: Full=U5 snRNP-specific
40 kDa protein; AltName: Full=WD repeat-containing
protein 57
gi|16306637|gb|AAH01494.1| Small nuclear ribonucleoprotein 40kDa (U5) [Homo sapiens]
gi|117574254|gb|ABK41111.1| CDW11/WDR57 [Homo sapiens]
gi|119628031|gb|EAX07626.1| WD repeat domain 57 (U5 snRNP specific), isoform CRA_a [Homo
sapiens]
gi|123993903|gb|ABM84553.1| WD repeat domain 57 (U5 snRNP specific) [synthetic construct]
gi|123997533|gb|ABM86368.1| WD repeat domain 57 (U5 snRNP specific) [synthetic construct]
gi|193786640|dbj|BAG51963.1| unnamed protein product [Homo sapiens]
gi|355745082|gb|EHH49707.1| hypothetical protein EGM_00416 [Macaca fascicularis]
gi|380818086|gb|AFE80917.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Macaca mulatta]
gi|383422975|gb|AFH34701.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Macaca mulatta]
gi|384950412|gb|AFI38811.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Macaca mulatta]
gi|410214170|gb|JAA04304.1| small nuclear ribonucleoprotein 40kDa (U5) [Pan troglodytes]
gi|410249170|gb|JAA12552.1| small nuclear ribonucleoprotein 40kDa (U5) [Pan troglodytes]
gi|410291358|gb|JAA24279.1| small nuclear ribonucleoprotein 40kDa (U5) [Pan troglodytes]
gi|410340249|gb|JAA39071.1| small nuclear ribonucleoprotein 40kDa (U5) [Pan troglodytes]
Length = 357
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 114 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 169
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 170 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 561 YDINTEK 567
+D+ K
Sbjct: 220 WDLRQNK 226
>gi|443896714|dbj|GAC74058.1| ribosome Assembly protein [Pseudozyma antarctica T-34]
Length = 542
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNS--VLGLCWLKKYPSKLVA 500
+++P P++ A + D V V + N I S+ G ++ V + W + LV+
Sbjct: 363 LQWSPKEPTVFASCSADRSVRVWDVRVKNRRSVI-SVEGAHAQDVNVISWNRGTDYLLVS 421
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ----LTSVHVNSTDDQ-FLASGYS 555
G D G ++++DL H P NS+ + FE ++SV ++T+D F A+G
Sbjct: 422 GGDEGALKVWDLRHFKP-------NSTPSPVAHFEWHKAPISSVEWHATEDSIFAAAGRD 474
Query: 556 KNVALYDINTEK 567
V L+D++ E+
Sbjct: 475 DQVTLWDLSVEQ 486
>gi|391335052|ref|XP_003741911.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Metaseiulus
occidentalis]
Length = 276
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 302 ANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVF 354
+ VK +++S +P+ +KHYR Y+I +PQL +LD I +RE AK VF
Sbjct: 110 STVKTLRFLSVLKNPVALKKHYRLYVIFRVPQLRILDFKRIKMAEREEAKKVF 162
>gi|238490668|ref|XP_002376571.1| ribosome biogenesis protein (Rrb1), putative [Aspergillus flavus
NRRL3357]
gi|220696984|gb|EED53325.1| ribosome biogenesis protein (Rrb1), putative [Aspergillus flavus
NRRL3357]
Length = 496
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V V + + + + V + W K+ L
Sbjct: 310 EELQWSPNERNVFASASSDGSVKVWDVRSKSRKPAVDVKVSNTDVNVMTWSKQTFHLLAT 369
Query: 501 GSDSGCVRLFDLNHIPPKVA--DARGNSSVATYYDF--EQLTSVHVNSTDDQFLASGYSK 556
G+D G ++DL H P A ++ +S +DF E +TS+ + TDD +A G +
Sbjct: 370 GADDGQWGVWDLRHWKPNAAAPSSQITASPVAAFDFHKEPITSIEWHPTDDSVVAVGSAD 429
Query: 557 N-VALYDINTE 566
N V L+D+ E
Sbjct: 430 NTVTLWDLAVE 440
>gi|417399615|gb|JAA46800.1| Putative u5 snrnp-specific protein-like factor [Desmodus rotundus]
Length = 358
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|47216142|emb|CAG10016.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 18/155 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ SL+ + D V V + E G I + G S + C+ ++ P +
Sbjct: 67 ELHYN-TDGSLLFSASTDKTVGVWDSETGE---RIKRLKGHTSFVNTCYPARRGPQLICT 122
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R ++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 123 GSDDGTVKLWDI----------RKKGAIHTFQNTYQVLAVTFNDTSDQIMSGGIDNDIKV 172
Query: 561 YDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLL 595
+D+ K L +M +V S S LL
Sbjct: 173 WDLRQNK---LIYNMQGHGDSVTGLSLSSEGSYLL 204
>gi|317145504|ref|XP_003189711.1| ribosome assembly protein rrb1 [Aspergillus oryzae RIB40]
Length = 496
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V V + + + + V + W K+ L
Sbjct: 310 EELQWSPNERNVFASASSDGSVKVWDVRSKSRKPAVDVKVSNTDVNVMTWSKQTFHLLAT 369
Query: 501 GSDSGCVRLFDLNHIPPKVA--DARGNSSVATYYDF--EQLTSVHVNSTDDQFLASGYSK 556
G+D G ++DL H P A ++ +S +DF E +TS+ + TDD +A G +
Sbjct: 370 GADDGQWGVWDLRHWKPNAAAPSSQITASPVAAFDFHKEPITSIEWHPTDDSVVAVGSAD 429
Query: 557 N-VALYDINTE 566
N V L+D+ E
Sbjct: 430 NTVTLWDLAVE 440
>gi|296207296|ref|XP_002750611.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
[Callithrix jacchus]
Length = 358
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|335773096|gb|AEH58279.1| U5 small nuclear ribonucleoprotein 40 kD protein-like protein,
partial [Equus caballus]
Length = 254
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 11 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 66
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 67 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 116
Query: 561 YDINTEK 567
+D+ K
Sbjct: 117 WDLRQNK 123
>gi|197097664|ref|NP_001124715.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Pongo abelii]
gi|67462026|sp|Q5RF51.1|SNR40_PONAB RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa protein;
Short=U5 snRNP 40 kDa protein; AltName: Full=WD
repeat-containing protein 57
gi|55725649|emb|CAH89606.1| hypothetical protein [Pongo abelii]
Length = 357
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 114 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 169
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 170 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 561 YDINTEK 567
+D+ K
Sbjct: 220 WDLRQNK 226
>gi|320593604|gb|EFX06013.1| ribosome biogenesis protein [Grosmannia clavigera kw1407]
Length = 497
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAG 501
+ +++PS S+ A + DG V V + + + + T V + W ++ L G
Sbjct: 310 ELQWSPSEASVFASASSDGTVRVWDVRSKSRKAALSVQVSTTDVNVMSWSRQTTHLLATG 369
Query: 502 SDSGCVRLFDLNHIPPKVADARGN-----SSVATY-YDFEQLTSVHVNSTDDQFLASGYS 555
+D G ++DL P A S +A++ Y EQ+TS+ + TDD +A
Sbjct: 370 ADDGVWGVWDLRQWKPSAGGAVAAVADRPSPIASFGYHKEQITSIEWHPTDDSIVAVAAG 429
Query: 556 KNVA-LYDINTE 566
N A L+D+ E
Sbjct: 430 DNTATLWDLAVE 441
>gi|440632609|gb|ELR02528.1| histone-binding protein RBBP4 [Geomyces destructans 20631-21]
Length = 440
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A +DG+V+V + G V G T GLCW +L
Sbjct: 151 YQPQNPNIIATMCIDGKVLVFDRTKHSSLPTGTVTPQAELRGHTKEGFGLCWNPHEKGQL 210
Query: 499 VAGSDSGCVRLFDLNHI 515
GS+ VRL+DL +
Sbjct: 211 ATGSEDKTVRLWDLKSV 227
>gi|350631000|gb|EHA19371.1| hypothetical protein ASPNIDRAFT_38790 [Aspergillus niger ATCC 1015]
Length = 495
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V V + + + + V + W + L
Sbjct: 309 EELQWSPNEKNVFASASSDGSVKVWDVRSKSRKPAVDVKVSNTDVNVMSWSNQTFHLLAT 368
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVAT---YYDF--EQLTSVHVNSTDDQFLASGYS 555
G+D G ++DL H P A A G+ + A+ +DF E +TS+ + TDD +A G +
Sbjct: 369 GADDGQWAVWDLRHWKPNAA-APGSQTTASPVASFDFHREPVTSIEWHPTDDSVVAVGSA 427
Query: 556 KN-VALYDINTE 566
N V L+D+ E
Sbjct: 428 DNTVTLWDLAVE 439
>gi|189054029|dbj|BAG36536.1| unnamed protein product [Homo sapiens]
Length = 357
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 114 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 169
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 170 GSDDGTVKLWDI----------RKKAAIQTFRNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 561 YDINTEK 567
+D+ K
Sbjct: 220 WDLRQNK 226
>gi|389751185|gb|EIM92258.1| glutamate-rich WD repeat-containing protein [Stereum hirsutum
FP-91666 SS1]
Length = 484
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVIN-HENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAG 501
+++PS P++ A + D V V + G + + ++ V + W + L++G
Sbjct: 296 LQWSPSEPTVFASCSADQSVRVWDVRSKGRKSVAGMDVAHSSDVNVISWNRSTTYLLLSG 355
Query: 502 SDSGCVRLFDLNHIPPKVADARGNSSVATY-YDFEQLTSVHVNSTDDQ-FLASGYSKNVA 559
D G ++++DL ++ + A + VA++ + +TS+ + T+D F ASG V
Sbjct: 356 GDEGGIKVWDLRNVKQRGTSAPDPTPVASFSWHGGPITSIEWHPTEDSIFAASGADDQVT 415
Query: 560 LYDINTEK 567
L+D+ E+
Sbjct: 416 LWDLAVEQ 423
>gi|83314758|ref|XP_730500.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490239|gb|EAA22065.1| notchless-related [Plasmodium yoelii yoelii]
Length = 674
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 480 GGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTS 539
G TNS+L L S L GS VRL+D+N P +AT D
Sbjct: 116 GHTNSILCLA-FSPNSSHLATGSGDNTVRLWDINTQTP----------IATLKDHTDWVL 164
Query: 540 VHVNSTDDQFLAS-GYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLHL 598
+ S D++FLA+ G KNV +YD +T K L + T +E + LC LHL
Sbjct: 165 SVLFSPDNKFLATTGMDKNVCIYDTHTGKLLNILTGHKKEV---------TTLCFEPLHL 215
>gi|29150251|ref|NP_082395.2| DNA damage-binding protein 2 [Mus musculus]
gi|71153331|sp|Q99J79.1|DDB2_MOUSE RecName: Full=DNA damage-binding protein 2; AltName:
Full=Damage-specific DNA-binding protein 2
gi|13311165|gb|AAK16810.1| damage-specific DNA-binding protein 2 [Mus musculus]
gi|148695603|gb|EDL27550.1| damage specific DNA binding protein 2, isoform CRA_a [Mus musculus]
Length = 432
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R L KLG + W LH ++S+ K R ++P++PS +A G
Sbjct: 71 RDLYQHKLGKATWSSLQQGLQKSFLHSLASYQVFRKAAPFDRRTTSLAWHPTHPSTLAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + ++ IG S+ GL + ++ A S G RL D
Sbjct: 131 SKGGDIMIWNFGIKDKPIFLKGIGAGGSITGLKFNHLNTNQFFASSMEGTTRLQDF 186
>gi|345315925|ref|XP_001519825.2| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like,
partial [Ornithorhynchus anatinus]
Length = 337
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 438 VRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPS 496
RPR+ + L + T D V V + E G + + G S + C+ ++ P
Sbjct: 106 ARPREGAAGHAKTMLFSAST-DKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQ 161
Query: 497 KLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSK 556
+ GSD G V+L+D+ R ++V T+ + Q+ +V N T DQ ++ G
Sbjct: 162 LVCTGSDDGTVKLWDI----------RKKAAVQTFQNTYQVLAVTFNDTSDQIVSGGIDN 211
Query: 557 NVALYDINTEK 567
++ ++D+ K
Sbjct: 212 DIKVWDLRQNK 222
>gi|145243194|ref|XP_001394137.1| ribosome assembly protein rrb1 [Aspergillus niger CBS 513.88]
gi|134078808|emb|CAK45867.1| unnamed protein product [Aspergillus niger]
Length = 495
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V V + + + + V + W + L
Sbjct: 309 EELQWSPNEKNVFASASSDGSVKVWDVRSKSRKPAVDVKVSNTDVNVMSWSNQTFHLLAT 368
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVAT---YYDF--EQLTSVHVNSTDDQFLASGYS 555
G+D G ++DL H P A A G+ + A+ +DF E +TS+ + TDD +A G +
Sbjct: 369 GADDGQWAVWDLRHWKPNAA-APGSQTTASPVASFDFHREPVTSIEWHPTDDSVVAVGSA 427
Query: 556 KN-VALYDINTE 566
N V L+D+ E
Sbjct: 428 DNTVTLWDLAVE 439
>gi|348690077|gb|EGZ29891.1| hypothetical protein PHYSODRAFT_552970 [Phytophthora sojae]
Length = 305
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 30/57 (52%)
Query: 315 SPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESV 371
+P+ K+YREY+I LPQL VLD I DRE A + F K H ESV
Sbjct: 122 NPVTKRKYYREYVIYKLPQLHVLDFQRIRPRDREAANAFFNSVVGQRALKEAHGESV 178
>gi|332254538|ref|XP_003276386.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein
isoform 3 [Nomascus leucogenys]
Length = 409
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 114 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 169
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 170 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 561 YDINTEK 567
+D+ K
Sbjct: 220 WDLRQNK 226
>gi|328772358|gb|EGF82396.1| hypothetical protein BATDEDRAFT_86622 [Batrachochytrium
dendrobatidis JAM81]
Length = 734
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 23/149 (15%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGL--------CWLKKY 494
F + S + + G G VIV E+ V + ++G T++VL L C +
Sbjct: 47 FTAHASKTNCLRIGPKSGRVIVTGGEDRKVNLW--AVGRTSAVLSLSGHSSPVECVCLDW 104
Query: 495 PSKLV-AGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASG 553
P +LV AGS SG ++L+DL H + G+ S AT F +F ASG
Sbjct: 105 PEELVVAGSSSGSLKLWDLEH-AKVIRTLSGHRSSATSVQFHPF---------GEFFASG 154
Query: 554 YSK-NVALYDINTEKPLQLFTDMHREPIN 581
S V L+D+ + +Q ++ H+ I+
Sbjct: 155 SSDCTVRLWDVRRKGCIQTYSG-HKNSID 182
>gi|325093686|gb|EGC46996.1| chromatin assembly factor [Ajellomyces capsulatus H88]
Length = 435
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V+V + G+V+ + +G T GL W L
Sbjct: 145 YQPQNPNVIATMCTDGRVMVWDRSKHPSLPTGSVSPELELLGHTKEGFGLSWSPHLVGHL 204
Query: 499 VAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQF------LAS 552
V GS+ VRL+D+ +GN ++ + +S+ VN D Q+ L
Sbjct: 205 VTGSEDKTVRLWDITQ------HTKGNKALRPSRTYTHHSSI-VN--DVQYHPLHSSLIG 255
Query: 553 GYSKNVALYDI-----NTEKPLQLFTDMHREPINVAKFS 586
S ++ L I +T + + D H++ IN F+
Sbjct: 256 TVSDDITLQIIDDREADTTRAAAVSRDQHKDAINAIAFN 294
>gi|332808262|ref|XP_003307986.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein
isoform 2 [Pan troglodytes]
Length = 409
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 114 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 169
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 170 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 561 YDINTEK 567
+D+ K
Sbjct: 220 WDLRQNK 226
>gi|351705003|gb|EHB07922.1| U5 small nuclear ribonucleoprotein 40 kDa protein, partial
[Heterocephalus glaber]
Length = 387
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 115 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 170
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + ++ +V N T DQ ++ G ++ +
Sbjct: 171 GSDDGTVKLWDI----------RKKAAIQTFQNTYEVLAVTFNDTSDQIISGGIDNDIKV 220
Query: 561 YDINTEK 567
+D+ K
Sbjct: 221 WDLRQNK 227
>gi|388855168|emb|CCF51299.1| related to RRB1-involved in the regulation of ribosome biosynthesis
[Ustilago hordei]
Length = 543
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNS--VLGLCWLKKYPSKLVA 500
+++P P++ A + D + V + N I S+ ++S V + W + LV+
Sbjct: 359 LQWSPKEPTVFASCSADRSIRVWDVRVKNRRSVI-SVENSHSQDVNVISWNRGTDYLLVS 417
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQ-FLASGYSKN 557
G D G ++++DL H P + A S ++D+ + ++SV + T+D F ASG
Sbjct: 418 GGDEGSLKVWDLRHFKPNSSSA---PSPVAHFDWHKAPISSVEWHPTEDSIFAASGRDDQ 474
Query: 558 VALYDINTEK 567
V L+D++ E+
Sbjct: 475 VTLWDLSVEQ 484
>gi|194385094|dbj|BAG60953.1| unnamed protein product [Homo sapiens]
Length = 409
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 114 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 169
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D+ R +++ T+ + Q+ +V N T DQ ++ G ++ +
Sbjct: 170 GSDDGTVKLWDI----------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 561 YDINTEK 567
+D+ K
Sbjct: 220 WDLRQNK 226
>gi|154317856|ref|XP_001558247.1| hypothetical protein BC1G_02911 [Botryotinia fuckeliana B05.10]
gi|347831560|emb|CCD47257.1| similar to histone-binding protein RBBP4-B [Botryotinia fuckeliana]
Length = 437
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHEN------GNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A +DG V++ + G V+ I IG GL W +L
Sbjct: 148 YQPQNPNIIATMCVDGRVLIFDRTKHSSLPKGVVSPQIELIGHKKEGFGLGWNPHVAGEL 207
Query: 499 VAGSDSGCVRLFDLN 513
GS+ VRL+DLN
Sbjct: 208 ATGSEDKTVRLWDLN 222
>gi|407425409|gb|EKF39406.1| hypothetical protein MOQ_000368 [Trypanosoma cruzi marinkellei]
Length = 1481
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 321 KHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFA 355
+ YR Y+I +LP+L+VLD +P+G L+++ AK VFA
Sbjct: 1114 QEYRNYIIYNLPKLKVLDGVPVGELEQQRAKEVFA 1148
>gi|148236149|ref|NP_001080712.1| small nuclear ribonucleoprotein 40kDa (U5) [Xenopus laevis]
gi|27924436|gb|AAH45034.1| Prp8bp-pending-prov protein [Xenopus laevis]
gi|76780026|gb|AAI06626.1| Prp8bp-pending-prov protein [Xenopus laevis]
Length = 337
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ SL+ + D V + + + G + + G S + C+ ++ P +
Sbjct: 94 ELHYN-TDGSLLFSASTDKTVAIWDCQTGE---RVKRLKGHTSYVNSCYPARRGPQLICT 149
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G V+L+D R ++V T+ + Q+ SV N T DQ ++ G ++ +
Sbjct: 150 GSDDGTVKLWDF----------RKKAAVQTFQNTYQVLSVTFNDTSDQIISGGIDNDIKV 199
Query: 561 YDINTEK 567
+D+ K
Sbjct: 200 WDLRQNK 206
>gi|301119811|ref|XP_002907633.1| U2 small nuclear ribonucleoprotein A', putative [Phytophthora
infestans T30-4]
gi|262106145|gb|EEY64197.1| U2 small nuclear ribonucleoprotein A', putative [Phytophthora
infestans T30-4]
Length = 329
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 29/57 (50%)
Query: 316 PICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVV 372
P+ K+YREY+I LPQL VLD I DRE A + F K H ESV
Sbjct: 123 PVTKRKYYREYVIYKLPQLHVLDFQRIRPRDREAANTFFNSAVGQRAMKEAHGESVA 179
>gi|295657258|ref|XP_002789199.1| histone acetyltransferase type B subunit 2 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226284446|gb|EEH40012.1| histone acetyltransferase type B subunit 2 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 431
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 63/157 (40%), Gaps = 22/157 (14%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V+V + G V + +G T GL W + L
Sbjct: 145 YQPQNPNVIATMCTDGRVMVWDRSRHPSLPTGTVCPELELLGHTKEGFGLSWSPHFIGHL 204
Query: 499 VAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNV 558
GS+ VRL+D+ +GN ++ + +S+ VN L S V
Sbjct: 205 ATGSEDKTVRLWDITQ------HTKGNKALKPSRTYTHHSSI-VNDVQYHPLHSSLIGTV 257
Query: 559 A---------LYDINTEKPLQLFTDMHREPINVAKFS 586
+ + + +T + + D H++ IN F+
Sbjct: 258 SDDITLQILDIREADTTRAAAVSKDEHKDAINAIAFN 294
>gi|226294210|gb|EEH49630.1| histone acetyltransferase type B subunit 2 [Paracoccidioides
brasiliensis Pb18]
Length = 435
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 63/157 (40%), Gaps = 22/157 (14%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V+V + G V + +G T GL W + L
Sbjct: 145 YQPQNPNVIATMCTDGRVMVWDRSRHPSLPTGTVCPELELLGHTKEGFGLSWSPHFIGHL 204
Query: 499 VAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNV 558
GS+ VRL+D+ +GN ++ + +S+ VN L S V
Sbjct: 205 ATGSEDKTVRLWDITQ------HTKGNKALKPSRTYTHHSSI-VNDVQYHPLHSSLIGTV 257
Query: 559 A---------LYDINTEKPLQLFTDMHREPINVAKFS 586
+ + + +T + + D H++ IN F+
Sbjct: 258 SDDITLQILDIREADTTRAAAVSKDEHKDAINAIAFN 294
>gi|225684904|gb|EEH23188.1| histone acetyltransferase type B subunit 2 [Paracoccidioides
brasiliensis Pb03]
Length = 434
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 63/157 (40%), Gaps = 22/157 (14%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V+V + G V + +G T GL W + L
Sbjct: 144 YQPQNPNVIATMCTDGRVMVWDRSRHPSLPTGTVCPELELLGHTKEGFGLSWSPHFIGHL 203
Query: 499 VAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNV 558
GS+ VRL+D+ +GN ++ + +S+ VN L S V
Sbjct: 204 ATGSEDKTVRLWDITQ------HTKGNKALKPSRTYTHHSSI-VNDVQYHPLHSSLIGTV 256
Query: 559 A---------LYDINTEKPLQLFTDMHREPINVAKFS 586
+ + + +T + + D H++ IN F+
Sbjct: 257 SDDITLQILDIREADTTRAAAVSKDEHKDAINAIAFN 293
>gi|259483461|tpe|CBF78870.1| TPA: ribosome biogenesis protein (Rrb1), putative (AFU_orthologue;
AFUA_6G10320) [Aspergillus nidulans FGSC A4]
Length = 492
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V V + + + + + V + W K+ L
Sbjct: 307 EELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNVKISNTDVNVMTWSKQTSHLLAT 366
Query: 501 GSDSGCVRLFDLNHIPPKVADAR--GNSSVATY-YDFEQLTSVHVNSTDDQFLASGYSKN 557
G+D G ++DL H P + + S VA++ + E +TS+ + TDD +A G + N
Sbjct: 367 GADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDSVIAVGSADN 426
Query: 558 -VALYDINTE 566
V L+D+ E
Sbjct: 427 TVTLWDLAVE 436
>gi|67542083|ref|XP_664809.1| hypothetical protein AN7205.2 [Aspergillus nidulans FGSC A4]
gi|40742267|gb|EAA61457.1| hypothetical protein AN7205.2 [Aspergillus nidulans FGSC A4]
Length = 486
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V V + + + + + V + W K+ L
Sbjct: 301 EELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNVKISNTDVNVMTWSKQTSHLLAT 360
Query: 501 GSDSGCVRLFDLNHIPPKVADAR--GNSSVATY-YDFEQLTSVHVNSTDDQFLASGYSKN 557
G+D G ++DL H P + + S VA++ + E +TS+ + TDD +A G + N
Sbjct: 361 GADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDSVIAVGSADN 420
Query: 558 -VALYDINTE 566
V L+D+ E
Sbjct: 421 TVTLWDLAVE 430
>gi|119498923|ref|XP_001266219.1| chromatin assembly factor 1 subunit C, putative [Neosartorya
fischeri NRRL 181]
gi|119414383|gb|EAW24322.1| chromatin assembly factor 1 subunit C, putative [Neosartorya
fischeri NRRL 181]
Length = 436
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V+V + G V + IG T GL W +L
Sbjct: 146 YQPQNPNIIATMCTDGRVMVWDRSKHPSLPTGQVNPQMELIGHTKEGFGLSWSPHTAGQL 205
Query: 499 VAGSDSGCVRLFDL 512
+ GS+ VR++DL
Sbjct: 206 ITGSEDKTVRIWDL 219
>gi|71653779|ref|XP_815521.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70880582|gb|EAN93670.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 1481
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 321 KHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFA 355
+ YR Y+I +LP+L+VLD +PIG L+++ A+ VFA
Sbjct: 1114 QEYRNYIIYNLPKLKVLDGVPIGELEQQRARDVFA 1148
>gi|156050181|ref|XP_001591052.1| hypothetical protein SS1G_07677 [Sclerotinia sclerotiorum 1980]
gi|154692078|gb|EDN91816.1| hypothetical protein SS1G_07677 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 437
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHEN------GNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A +DG V+V + G V+ + +G GL W +L
Sbjct: 148 YQPQNPNIIATMCVDGRVLVFDRTKHSSLPKGIVSPQVELVGHKKEGFGLGWNPHVAGEL 207
Query: 499 VAGSDSGCVRLFDLN 513
GS+ VRL+DLN
Sbjct: 208 ATGSEDKTVRLWDLN 222
>gi|328909191|gb|AEB61263.1| u5 small nuclear ribonucleoprotein 40 kda-like protein, partial
[Equus caballus]
Length = 217
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 476 IPSIGGTNSVLGLCW-LKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDF 534
+ + G S + C+ ++ P + GSD G V+L+D+ R +++ T+ +
Sbjct: 4 VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI----------RKKAAIQTFQNT 53
Query: 535 EQLTSVHVNSTDDQFLASGYSKNVALYDINTEKP 568
Q+ +V N T DQ ++ G ++ ++D+ KP
Sbjct: 54 YQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKP 87
>gi|425777709|gb|EKV15866.1| Ribosome biogenesis protein (Rrb1), putative [Penicillium digitatum
Pd1]
gi|425780033|gb|EKV18056.1| Ribosome biogenesis protein (Rrb1), putative [Penicillium digitatum
PHI26]
Length = 493
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V V + + + + V + W + L
Sbjct: 307 EELQWSPNERNVFASASSDGSVKVWDVRSKSRKPAVDVQVSNTDVNVMSWSNQTAHLLAT 366
Query: 501 GSDSGCVRLFDLNHIPPKVA--DARGNSSVATYYDF--EQLTSVHVNSTDDQFLASGYSK 556
G+D G ++DL H P A A+ S+ +DF E +T++ + +DD +A G +
Sbjct: 367 GADDGQWAVWDLRHWKPNAAAPSAQVTSTPVASFDFHKEPITTIEWHPSDDSVVAVGSAD 426
Query: 557 N-VALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLH 597
N V L+D+ E D N+A P LL +H
Sbjct: 427 NTVTLWDLAVE-----LDDEESRQANMADI----PSQLLFVH 459
>gi|70992143|ref|XP_750920.1| ribosome biogenesis protein (Rrb1) [Aspergillus fumigatus Af293]
gi|66848553|gb|EAL88882.1| ribosome biogenesis protein (Rrb1), putative [Aspergillus fumigatus
Af293]
gi|159124489|gb|EDP49607.1| ribosome biogenesis protein (Rrb1), putative [Aspergillus fumigatus
A1163]
Length = 496
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V V + + + + V + W K+ L
Sbjct: 310 EELQWSPNERNVFASASSDGSVKVWDVRSKSRKPAVDVKVSNTDVNVMSWSKQTFHLLAT 369
Query: 501 GSDSGCVRLFDLNHIPPKVA--DARGNSSVATYYDF--EQLTSVHVNSTDDQFLASGYSK 556
G+D G ++DL H P + ++ +S +DF E +TS+ + TDD +A G +
Sbjct: 370 GADDGQWAVWDLRHWKPNASAPSSQIKASPVAAFDFHREPVTSIEWHPTDDSVVAVGSAD 429
Query: 557 N-VALYDINTE 566
N V L+D+ E
Sbjct: 430 NTVTLWDLAVE 440
>gi|347828140|emb|CCD43837.1| similar to glutamate-rich WD repeat containing protein 1
[Botryotinia fuckeliana]
Length = 489
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++PS ++ A + DG + V + + + + V + W + L +
Sbjct: 305 EELQWSPSEKNVFASASSDGTIKVWDIRSKSRTAALTVQVSETDVNVMSWSHQTSHLLAS 364
Query: 501 GSDSGCVRLFDL-NHIPPKVADARGNSSVATY-YDFEQLTSVHVNSTDDQFLA-SGYSKN 557
G+D G ++DL N P K ++ S VA++ + EQ+TSV + TDD +A +
Sbjct: 365 GADDGVWAVWDLRNWKPSKTSEPAKPSPVASFNFHKEQITSVEWHPTDDSIVAVAAGDDT 424
Query: 558 VALYDINTE 566
+ L+D+ E
Sbjct: 425 LTLWDLAVE 433
>gi|345317896|ref|XP_001517942.2| PREDICTED: DNA damage-binding protein 2-like, partial
[Ornithorhynchus anatinus]
Length = 391
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
E++P++PS + G+ G++I+ ++E + C+I IG S+ G+ + P++L S
Sbjct: 29 LEWHPTHPSTLTVGSKGGDIILWDYEVLDKTCFIKGIGAGGSITGMKFNPLNPNQLYTSS 88
Query: 503 DSGCVRLFDLN 513
+G L D
Sbjct: 89 MAGTTSLQDFT 99
>gi|154304274|ref|XP_001552542.1| hypothetical protein BC1G_08407 [Botryotinia fuckeliana B05.10]
Length = 479
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++PS ++ A + DG + V + + + + V + W + L +
Sbjct: 295 EELQWSPSEKNVFASASSDGTIKVWDIRSKSRTAALTVQVSETDVNVMSWSHQTSHLLAS 354
Query: 501 GSDSGCVRLFDL-NHIPPKVADARGNSSVATY-YDFEQLTSVHVNSTDDQFLA-SGYSKN 557
G+D G ++DL N P K ++ S VA++ + EQ+TSV + TDD +A +
Sbjct: 355 GADDGVWAVWDLRNWKPSKTSEPAKPSPVASFNFHKEQITSVEWHPTDDSIVAVAAGDDT 414
Query: 558 VALYDINTE 566
+ L+D+ E
Sbjct: 415 LTLWDLAVE 423
>gi|71004566|ref|XP_756949.1| hypothetical protein UM00802.1 [Ustilago maydis 521]
gi|46095550|gb|EAK80783.1| hypothetical protein UM00802.1 [Ustilago maydis 521]
Length = 538
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGG-TNSVLGLCWLKKYPSKLVAG 501
+++P P++ A + D + V + N I V + W + LV+G
Sbjct: 352 LQWSPKEPTVFASCSADRSIRVWDVRVKNRRSVISVENAHVQDVNVISWNRGTDYLLVSG 411
Query: 502 SDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQ-FLASGYSKNV 558
D G ++++DL H P + A S ++D+ + ++SV + T+D F ASG V
Sbjct: 412 GDEGALKVWDLRHFKPNSSTA---PSAVAHFDWHKAPISSVEWHPTEDSIFAASGRDDQV 468
Query: 559 ALYDINTE 566
L+D++ E
Sbjct: 469 TLWDLSVE 476
>gi|350537573|ref|NP_001234299.1| peroxisomal targeting signal type 2 receptor [Solanum lycopersicum]
gi|28195239|gb|AAO27452.1| peroxisomal targeting signal type 2 receptor [Solanum lycopersicum]
Length = 317
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 37/145 (25%)
Query: 434 GNKRVRPRQFEYNPSNP--SLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWL 491
GN RV Q NP+ P L AF T DG V +CW
Sbjct: 35 GNGRVHILQL--NPNGPVSELAAFDTADG------------------------VYDVCWS 68
Query: 492 KKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDF-EQLTSVHVNST-DDQF 549
+ + S ++AGS G V+L+DL+ +PP N+ + ++ + ++ SV N+ D F
Sbjct: 69 EAHDSLVIAGSGDGSVKLYDLS-LPPT------NNPIRSFKEHTREVHSVDYNTVRKDSF 121
Query: 550 LASGYSKNVALYDINTEKPLQLFTD 574
L++ + V L+ ++ ++ F +
Sbjct: 122 LSASWDDTVKLWTVDRNASVRTFKE 146
>gi|449015485|dbj|BAM78887.1| similar to ribosome assembly protein RRB1 [Cyanidioschyzon merolae
strain 10D]
Length = 475
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 28/162 (17%)
Query: 416 SAWPLLHPVSSFSHIYKEGNKRVR-----PRQFEYNPSNPSLMAFGTLDGEVIVINHENG 470
S W +L P G++ +R +++P+ PSL+A + D + V++
Sbjct: 255 SGWAILQP---------NGDRMLRLHGASIEDLQWSPTEPSLIASCSCDRSIKVLDLRAA 305
Query: 471 NVACYIPSIGGTNS----VLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNS 526
N P+I T + V + W ++YP ++++G D G + ++DL G++
Sbjct: 306 NR----PAIELTEAHPCDVNAIAWNRRYPKQIISGDDQGQIHVWDLR----MSGSIEGST 357
Query: 527 SVATY-YDFEQLTSVHVNSTD-DQFLASGYSKNVALYDINTE 566
VA+ Y + + S+ N + F A+ +V+++D++ E
Sbjct: 358 PVASLSYHKDPIYSLEWNRIEPSMFCATCGDGSVSIWDLSLE 399
>gi|426328697|ref|XP_004025386.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
40 kDa protein [Gorilla gorilla gorilla]
Length = 351
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 459 DGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVAGSDSGCVRLFDLNHIPP 517
D V V + E G + + G S + C+ ++ P + GSD G V+L+D+
Sbjct: 124 DKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI----- 175
Query: 518 KVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEK 567
R +++ T+ + Q+ +V N T DQ ++ G ++ ++D+ K
Sbjct: 176 -----RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 220
>gi|391328685|ref|XP_003738815.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
[Metaseiulus occidentalis]
Length = 355
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 492 KKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLA 551
++ P +V+GSD ++L+D AR + V T + Q+T+V N T DQ +A
Sbjct: 158 RRGPQMIVSGSDDSTIKLWD----------ARRKTPVKTLQEQYQITAVSFNDTADQVIA 207
Query: 552 SGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCL 593
G V ++D+ + + H++ I SH L L
Sbjct: 208 GGIDNVVKIWDLRKDSIVYRMLG-HQDTITGMSLSHDGGLLL 248
>gi|119471322|ref|XP_001258158.1| ribosome biogenesis protein (Rrb1), putative [Neosartorya fischeri
NRRL 181]
gi|119406310|gb|EAW16261.1| ribosome biogenesis protein (Rrb1), putative [Neosartorya fischeri
NRRL 181]
Length = 496
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V V + + + + V + W K+ L
Sbjct: 310 EELQWSPNERNVFASASSDGSVKVWDVRSKSRKPAVDVKVSNTDVNVMSWSKQTFHLLAT 369
Query: 501 GSDSGCVRLFDLNHIPPKVADARG--NSSVATYYDF--EQLTSVHVNSTDDQFLASGYSK 556
G+D G ++DL H P + +S +DF E +TS+ + TDD +A G +
Sbjct: 370 GADDGQWAVWDLRHWKPNASAPSSPIKASPVAAFDFHREPVTSIEWHPTDDSVVAVGSAD 429
Query: 557 N-VALYDINTE 566
N V L+D+ E
Sbjct: 430 NTVTLWDLAVE 440
>gi|407860323|gb|EKG07342.1| hypothetical protein TCSYLVIO_001526 [Trypanosoma cruzi]
Length = 1481
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 321 KHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFA 355
+ YR Y+I +LP+L+VLD +PIG ++++ A+ VFA
Sbjct: 1114 QEYRNYIIYNLPKLKVLDGVPIGEMEQQRARDVFA 1148
>gi|407925966|gb|EKG18939.1| hypothetical protein MPH_03823 [Macrophomina phaseolina MS6]
Length = 432
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 13/103 (12%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE--------NGNVACYIPSIGGTNSVLGLCWLKKYPS 496
Y P NP+L+A DG V+V + G V+ + G + GL W
Sbjct: 140 YQPQNPNLIATMCTDGRVLVFDRTKHTSDPDPTGKVSPDMELKGHSEEGFGLSWSPHIEG 199
Query: 497 KLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTS 539
+LV GS VRL+D K ++GN +++ F T+
Sbjct: 200 QLVTGSQDSTVRLWDT-----KAGFSKGNPTISPARTFTHHTA 237
>gi|405959755|gb|EKC25749.1| Centriolin [Crassostrea gigas]
Length = 2481
Score = 43.5 bits (101), Expect = 0.33, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 315 SPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSL 374
+P+ HYR+Y++ L LEVLD+ P+ DR++A+ F + + L + E S
Sbjct: 229 NPVAGLPHYRQYLVYHLRTLEVLDSQPVTERDRQMARDRFEQ--DELERLERQVEEDDSR 286
Query: 375 LQKREMGTSGNYQNSS--KPKQPNIHRTQ 401
L+K E + + Q SS K +Q I R Q
Sbjct: 287 LRKLEEEKNLSAQESSLLKAQQEEIVRQQ 315
>gi|296817209|ref|XP_002848941.1| histone acetyltransferase type B subunit 2 [Arthroderma otae CBS
113480]
gi|238839394|gb|EEQ29056.1| histone acetyltransferase type B subunit 2 [Arthroderma otae CBS
113480]
Length = 432
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V++ + G V + +G T+ GL W ++
Sbjct: 142 YQPQNPNIIATMCTDGRVMIWDRSKHPSIPQGTVNPQLELLGHTSEGFGLSWNPHTAGEV 201
Query: 499 VAGSDSGCVRLFDLN 513
GS+ VRL+DLN
Sbjct: 202 ATGSEDKTVRLWDLN 216
>gi|326468947|gb|EGD92956.1| chromatin assembly factor 1 subunit C [Trichophyton tonsurans CBS
112818]
gi|326480074|gb|EGE04084.1| histone acetyltransferase type B subunit 2 [Trichophyton equinum
CBS 127.97]
Length = 432
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V++ + G V + +G T+ GL W ++
Sbjct: 142 YQPQNPNIIATMCTDGRVMIWDRSKHPSLPQGTVNPQLELLGHTSEGFGLSWNPHTAGEV 201
Query: 499 VAGSDSGCVRLFDLN 513
GS+ VRL+DLN
Sbjct: 202 ATGSEDKTVRLWDLN 216
>gi|402081553|gb|EJT76698.1| ribosome assembly protein RRB1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 518
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++PS S+ A + DG V V + + + A + V W ++ L G+
Sbjct: 332 IQWSPSEASVFASASSDGTVRVWDIRSKSRAAALSVKISDTDVNVASWSRQTTHLLATGA 391
Query: 503 DSGCVRLFDLNHIPPKVAD-----ARGNSSVATY-YDFEQLTSVHVNSTDDQFLASGYSK 556
D G ++DL P A + ++ +A++ Y EQ+TS+ + TDD +A
Sbjct: 392 DDGAWAVWDLRQWKPAAAGGGKGASTSSTPIASFSYHKEQITSIEWHPTDDSIMAVAAGD 451
Query: 557 N-VALYDINTE 566
N V L+D+ E
Sbjct: 452 NTVTLWDLAVE 462
>gi|241252351|ref|XP_002403640.1| DNA damage-binding protein, putative [Ixodes scapularis]
gi|215496527|gb|EEC06167.1| DNA damage-binding protein, putative [Ixodes scapularis]
Length = 440
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
E++PS P L AFG+ GE+++ N + P +G SV + +LK ++ +
Sbjct: 127 IEWHPSQPELCAFGSKTGEIVLWNSSAPDKRTGTPPMGNGGSVAAMKFLKGDAQRMYTAT 186
Query: 503 DSGCVRLFDLNHIPPKV 519
G V L D P+V
Sbjct: 187 LLGRVMLQDFGGAQPQV 203
>gi|302812327|ref|XP_002987851.1| hypothetical protein SELMODRAFT_126756 [Selaginella moellendorffii]
gi|300144470|gb|EFJ11154.1| hypothetical protein SELMODRAFT_126756 [Selaginella moellendorffii]
Length = 664
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 461 EVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPS-KLVA-GSDSGCVRLFDLNHIPPK 518
E+ +N E G + S +V+G + P+ L+A G + G + FDL +
Sbjct: 162 EIYCLNLEQGRFLAPLSSRSPGVNVIG-----RSPAHGLIACGGEDGALECFDLRQ---R 213
Query: 519 VADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFTDMHRE 578
A AR ++ T +++T++ + T+ FLA+G S A+YDI + P+ + M+
Sbjct: 214 AAVARIDAVKPTGNVDQEVTALRFDDTEGLFLAAGTSAGQAIYDIRSSAPIAIKDHMYDA 273
Query: 579 PI 580
PI
Sbjct: 274 PI 275
>gi|327301547|ref|XP_003235466.1| chromatin assembly factor 1 subunit C [Trichophyton rubrum CBS
118892]
gi|326462818|gb|EGD88271.1| chromatin assembly factor 1 subunit C [Trichophyton rubrum CBS
118892]
Length = 432
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V++ + G V + +G T+ GL W ++
Sbjct: 142 YQPQNPNIIATMCTDGRVMIWDRSKHPSLPQGTVNPQLELLGHTSEGFGLSWNPHTAGEV 201
Query: 499 VAGSDSGCVRLFDLN 513
GS+ VRL+DLN
Sbjct: 202 ATGSEDKTVRLWDLN 216
>gi|149024096|gb|EDL80593.1| similar to U5 snRNP-specific protein (Prp8-binding) (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 235
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVAGSDSGCVRLFDLNHI 515
+ D V V + E G + + G S + C+ ++ P + GSD G V+L+D+
Sbjct: 6 STDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI--- 59
Query: 516 PPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEK 567
R +++ T+ + Q+ +V N T DQ ++ G ++ ++D+ K
Sbjct: 60 -------RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 104
>gi|121699738|ref|XP_001268134.1| ribosome biogenesis protein (Rrb1), putative [Aspergillus clavatus
NRRL 1]
gi|119396276|gb|EAW06708.1| ribosome biogenesis protein (Rrb1), putative [Aspergillus clavatus
NRRL 1]
Length = 496
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V V + + + + V + W + L
Sbjct: 310 EELQWSPNEKNVFASASSDGSVKVWDVRSKSRKPAVDVKVSNTDVNVMSWSNQTFHLLAT 369
Query: 501 GSDSGCVRLFDLNHIPP--KVADARGNSSVATYYDF--EQLTSVHVNSTDDQFLASGYSK 556
G+D G ++DL H P A+ +S +DF E +TS+ + TDD +A G +
Sbjct: 370 GADDGQWAVWDLRHWKPNPSAPSAQIKASPVAAFDFHREPVTSIEWHPTDDSVVAVGSAD 429
Query: 557 N-VALYDINTE 566
N V L+D+ E
Sbjct: 430 NTVTLWDLAVE 440
>gi|70985048|ref|XP_748030.1| chromatin assembly factor 1 subunit C [Aspergillus fumigatus Af293]
gi|74667945|sp|Q4WEI5.1|HAT2_ASPFU RecName: Full=Histone acetyltransferase type B subunit 2
gi|66845658|gb|EAL85992.1| chromatin assembly factor 1 subunit C, putative [Aspergillus
fumigatus Af293]
gi|159126046|gb|EDP51162.1| chromatin assembly factor 1 subunit C, putative [Aspergillus
fumigatus A1163]
Length = 436
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V+V + G V + IG T GL W +L
Sbjct: 146 YQPQNPNIIATMCTDGRVMVWDRSKHPSLPTGQVNPQMELIGHTKEGFGLSWSPHTAGQL 205
Query: 499 VAGSDSGCVRLFDL 512
GS+ VR++DL
Sbjct: 206 ATGSEDKTVRIWDL 219
>gi|302506322|ref|XP_003015118.1| hypothetical protein ARB_06878 [Arthroderma benhamiae CBS 112371]
gi|302656476|ref|XP_003019991.1| hypothetical protein TRV_05960 [Trichophyton verrucosum HKI 0517]
gi|291178689|gb|EFE34478.1| hypothetical protein ARB_06878 [Arthroderma benhamiae CBS 112371]
gi|291183769|gb|EFE39367.1| hypothetical protein TRV_05960 [Trichophyton verrucosum HKI 0517]
Length = 428
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V++ + G V + +G T+ GL W ++
Sbjct: 138 YQPQNPNIIATMCTDGRVMIWDRSKHPSLPQGTVNPQLELLGHTSEGFGLSWNPHTAGEV 197
Query: 499 VAGSDSGCVRLFDLN 513
GS+ VRL+DLN
Sbjct: 198 ATGSEDKTVRLWDLN 212
>gi|315049289|ref|XP_003174019.1| histone acetyltransferase type B subunit 2 [Arthroderma gypseum CBS
118893]
gi|311341986|gb|EFR01189.1| histone acetyltransferase type B subunit 2 [Arthroderma gypseum CBS
118893]
Length = 428
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V++ + G V + +G T+ GL W ++
Sbjct: 138 YQPQNPNIIATMCTDGRVMIWDRSKHPSIPQGTVNPQLELLGHTSEGFGLSWNPHTAGEV 197
Query: 499 VAGSDSGCVRLFDLN 513
GS+ VRL+DLN
Sbjct: 198 ATGSEDKTVRLWDLN 212
>gi|209878003|ref|XP_002140443.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209556049|gb|EEA06094.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 486
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 24/173 (13%)
Query: 430 IYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSI--GGTNSVLG 487
+Y++ V Q+ PS+ ++ A G +D + +I+ + +++ I + G N+
Sbjct: 300 VYRQFQSSVEILQWMKEPSHNTIFAAGFVDSNINIIDTRSDDISISIHNAHNGDINT--- 356
Query: 488 LCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ-LTSVHVNSTD 546
L W L++GSD ++L+ D R N+++ T+ +Q + SV D
Sbjct: 357 LSWNPGNEYLLLSGSDDCDIKLW----------DTRTNNTLETFKWHKQPILSVDWLEID 406
Query: 547 -DQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLHL 598
D FLA+ +++ +DI E+P D + +N+ + P +L LH+
Sbjct: 407 SDVFLAASLDNSISFWDIGIEQP--AVDDEKSDNVNI-----NVPYKILFLHM 452
>gi|146101536|ref|XP_001469140.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398023509|ref|XP_003864916.1| hypothetical protein, conserved [Leishmania donovani]
gi|134073509|emb|CAM72241.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322503152|emb|CBZ38236.1| hypothetical protein, conserved [Leishmania donovani]
Length = 303
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 316 PICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSL- 374
PI + +YR +++A++P LE LD+ I +R A +VF + P K+ + + +
Sbjct: 100 PITRDPNYRRFVVAAIPSLERLDDRDITDEERNNALAVFPQLLSFAPPPSKYAQPLEGIA 159
Query: 375 ---LQKREMGTSGNYQNSS-------KPKQPNIH------RTQHFFSRSLSAAKLGSSAW 418
+Q+RE N ++S + +PN+H F ++ ++GS A
Sbjct: 160 PPTIQEREAQARANSTHASHSGATGFEAGRPNMHPRKATNSVSGFGGGNVYNGRVGSGAS 219
Query: 419 --PLLHPVSSFSHIYKEGNK 436
P +H S +Y++ N+
Sbjct: 220 GNPTIHKAPPAS-VYQDPNR 238
>gi|403411377|emb|CCL98077.1| predicted protein [Fibroporia radiculosa]
Length = 518
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 488 LCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATY-YDFEQLTSVHVNSTD 546
+ W + L++G D G ++++DL ++ K A + VAT+ + +TS+ + T+
Sbjct: 376 ISWNRATTYLLLSGGDEGGIKVWDLRNVNRKGASTPDPTPVATFTWHGAPITSIEWHPTE 435
Query: 547 DQ-FLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLH 597
D F ASG + L+D+ E+ + M P + P LL +H
Sbjct: 436 DSIFAASGADDQITLWDLAVEQDDEETGAMEETP----EGGRDVPPQLLFVH 483
>gi|384486790|gb|EIE78970.1| hypothetical protein RO3G_03675 [Rhizopus delemar RA 99-880]
Length = 477
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 22/176 (12%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++P+ S+ A + D V + + N + G++ V + W KK L +G
Sbjct: 299 LQWSPTENSVFASCSSDQTVKIWDTRNKKRSAVSVRASGSD-VNVISWNKKASYLLASGH 357
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATY-YDFEQLTSVHVNSTDDQFLA-SGYSKNVAL 560
D G ++DL P A ++ VAT+ + +TS+ + T++ LA SG + L
Sbjct: 358 DDGVFSVWDLRTFSPNAA----STPVATFKWHHGPITSIEWHPTEESVLAVSGADNQLTL 413
Query: 561 YDINTE---------------KPLQLFTDMHREPINVAKFSHHSPLCLLLLHLTTM 601
+D++ E P LF +E I F P C++ T M
Sbjct: 414 WDLSVEPDSEQDGQMTTHEEVPPQLLFVHQGQEDIKELHFHKQIPGCVISTANTGM 469
>gi|443734905|gb|ELU18761.1| hypothetical protein CAPTEDRAFT_229322 [Capitella teleta]
Length = 253
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 302 ANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVF 354
A+VK +YIS +PI +KHYR Y+I LP L +LD I + +R+ A +F
Sbjct: 110 ASVKTLQYISLLRNPIATKKHYRLYVIHKLPNLRLLDFQKIKKKERDAANVMF 162
>gi|260824758|ref|XP_002607334.1| hypothetical protein BRAFLDRAFT_276603 [Branchiostoma floridae]
gi|229292681|gb|EEN63344.1| hypothetical protein BRAFLDRAFT_276603 [Branchiostoma floridae]
Length = 347
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 492 KKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLA 551
++ P +V+GSD +RL+D R S T+ + Q+TSV N T DQ L+
Sbjct: 151 RRGPQMVVSGSDDSTIRLWD----------TRKKGSAQTFQNTYQVTSVSFNDTSDQILS 200
Query: 552 SGYSKNVALYDI 563
G ++ +D+
Sbjct: 201 GGIDNDIKCWDL 212
>gi|121718859|ref|XP_001276217.1| chromatin assembly factor 1 subunit C, putative [Aspergillus
clavatus NRRL 1]
gi|119404415|gb|EAW14791.1| chromatin assembly factor 1 subunit C, putative [Aspergillus
clavatus NRRL 1]
Length = 436
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V++ + G V + +G T GL W L
Sbjct: 146 YQPQNPNIIATMCTDGRVMIWDRSKHPSLPTGTVNPQMELLGHTKEGFGLSWSPHTAGHL 205
Query: 499 VAGSDSGCVRLFDL 512
V GS+ VRL+DL
Sbjct: 206 VTGSEDKTVRLWDL 219
>gi|119183091|ref|XP_001242619.1| hypothetical protein CIMG_06515 [Coccidioides immitis RS]
gi|303319607|ref|XP_003069803.1| Chromatin assembly factor 1 subunit C , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109489|gb|EER27658.1| Chromatin assembly factor 1 subunit C , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320040721|gb|EFW22654.1| chromatin assembly factor 1 subunit C [Coccidioides posadasii str.
Silveira]
gi|392865523|gb|EAS31318.2| histone acetyltransferase type B subunit 2 [Coccidioides immitis
RS]
Length = 434
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 429 HIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGT 482
HI ++ + + + Y P NP+++A DG V++ + G V + +G T
Sbjct: 128 HIVQKIDHKGEVNKARYQPQNPNVIATMCTDGRVMIWDRSKHPSLPTGTVNPELELLGHT 187
Query: 483 NSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
GL W L GS+ VRL+DL
Sbjct: 188 KEGFGLSWSPHSAGHLATGSEDKTVRLWDL 217
>gi|442759011|gb|JAA71664.1| Putative u2-associated snrnp a' protein [Ixodes ricinus]
Length = 219
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 302 ANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVF 354
A VK Y+S +P+ ++HYR Y+I LPQL VLD I + +R A+ +F
Sbjct: 110 ATVKSLTYLSLIKNPVTVKRHYRLYLIHRLPQLRVLDFRRIRQKERTDAQQLF 162
>gi|358254064|dbj|GAA54098.1| katanin p80 WD40-containing subunit B1 [Clonorchis sinensis]
Length = 738
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 21/151 (13%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHEN--------GNVACYIPSIGGTNSVLGLCWLKKYPS 496
++P + ++ G G V+ E+ G AC + G T+SV +
Sbjct: 12 HSPGAVTCVSLGRKSGRVMATGGEDRRVKLWAVGKPACILSLTGHTSSVEA-TEFSQEED 70
Query: 497 KLVAGSDSGCVRLFDLNHIPPKVADA-RGNSSVATYYDFEQLTSVHVNSTDDQFLASGYS 555
++ AGS SG +R++DL + K+ A G++S + DF + V+ + D F
Sbjct: 71 RVAAGSLSGSIRIWDLEEV--KIVRALSGHTSAVSSLDFHPFGNFVVSGSIDTF------ 122
Query: 556 KNVALYDINTEKPLQLFTDMHREPINVAKFS 586
V L+D++ + + + H +N+A+FS
Sbjct: 123 --VKLWDVSRKGCINTYRG-HSGGVNMARFS 150
>gi|291231573|ref|XP_002735738.1| PREDICTED: Small nuclear ribonucleoprotein polypeptide A-like
[Saccoglossus kowalevskii]
Length = 345
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 302 ANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVF 354
A+VK + +S +P+ +KHYR Y+I+ LPQL++LD I +RE A+ VF
Sbjct: 110 ASVKTLRVLSLLNNPVISKKHYRLYVISKLPQLKLLDFQKIRMKEREQARKVF 162
>gi|169776421|ref|XP_001822677.1| histone acetyltransferase type B subunit 2 [Aspergillus oryzae
RIB40]
gi|238503105|ref|XP_002382786.1| chromatin assembly factor 1 subunit C, putative [Aspergillus flavus
NRRL3357]
gi|90101340|sp|Q2UA71.1|HAT2_ASPOR RecName: Full=Histone acetyltransferase type B subunit 2
gi|83771412|dbj|BAE61544.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220691596|gb|EED47944.1| chromatin assembly factor 1 subunit C, putative [Aspergillus flavus
NRRL3357]
gi|391870643|gb|EIT79820.1| nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Aspergillus
oryzae 3.042]
Length = 436
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V++ + G V + +G T GL W L
Sbjct: 146 YQPQNPNVIATMCTDGRVMIWDRSKHPSLPTGTVNPQMELLGHTKEGFGLSWSPHTAGHL 205
Query: 499 VAGSDSGCVRLFDL 512
V GS+ VRL+DL
Sbjct: 206 VTGSEDKTVRLWDL 219
>gi|145510037|ref|XP_001440954.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408188|emb|CAK73557.1| unnamed protein product [Paramecium tetraurelia]
Length = 988
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 26/157 (16%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYI-------------PSIGGTNSVLGLC 489
E+N P+L+A G D V+VIN+ +A I P++ +S+ +
Sbjct: 119 IEFNEFKPNLIALGGQD--VLVINYNIFQIADIIKDIQNPQVFGPGNPNLHEDSSITAVS 176
Query: 490 WLKKYPSKLVAGSDSGCVRLFDLNHIPP----KVADARGNSSVATYYDFEQLTSVHVNST 545
W KK L + S +G ++DL + P + + A N V+ ++ E T + V
Sbjct: 177 WNKKILHILASASQNGMTGVWDLRNNKPIFSFQDSSAISNKKVSLLWNPEIPTQIAVAYD 236
Query: 546 DDQFLASGYSKNVALYDI-NTEKPLQLFTDMHREPIN 581
D++ + + ++D+ N + P +F+ +HR IN
Sbjct: 237 DER------APELQIWDLRNPQGPTIVFSQVHRSGIN 267
>gi|91093477|ref|XP_968017.1| PREDICTED: similar to AGAP009506-PA [Tribolium castaneum]
gi|270012667|gb|EFA09115.1| hypothetical protein TcasGA2_TC015975 [Tribolium castaneum]
Length = 347
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 13/81 (16%)
Query: 483 NSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHV 542
NSV G ++ P LV+GSD ++L+D+ R SV T+ Q+T+V
Sbjct: 145 NSVQGA---RRGPQMLVSGSDDTTIKLWDI----------RKKQSVTTFNSNYQVTAVEF 191
Query: 543 NSTDDQFLASGYSKNVALYDI 563
N T +Q + G ++ ++DI
Sbjct: 192 NDTAEQIFSGGIDNDIKVWDI 212
>gi|255956443|ref|XP_002568974.1| Pc21g19830 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590685|emb|CAP96880.1| Pc21g19830 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 498
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V V + + + + V + W + L
Sbjct: 307 EELQWSPNERNVFASASSDGSVKVWDVRSKSRKPAVDVQVSNTDVNVMSWSNQTAHLLAT 366
Query: 501 GSDSGCVRLFDLNHIPPKVA--DARGNSSVATYYDF--EQLTSVHVNSTDDQFLASGYSK 556
G+D G ++DL H P + A+ S+ +DF E +T++ + +DD +A G +
Sbjct: 367 GADDGQWAVWDLRHWKPNASAPSAQIKSTPVASFDFHKEPITTIEWHPSDDSVVAVGSAD 426
Query: 557 N-VALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLH 597
N V L+D+ E D N+A P LL +H
Sbjct: 427 NTVTLWDLAVE-----LDDEESRQANMADI----PSQLLFVH 459
>gi|302824258|ref|XP_002993774.1| hypothetical protein SELMODRAFT_137560 [Selaginella moellendorffii]
gi|300138424|gb|EFJ05193.1| hypothetical protein SELMODRAFT_137560 [Selaginella moellendorffii]
Length = 664
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 498 LVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKN 557
+ G + G + FDL + A AR ++ T +++T++ + T+ FLA+G S
Sbjct: 196 IACGGEDGALECFDLRQ---RAAVARIDAVKPTGNVDQEVTALRFDDTEGLFLAAGTSAG 252
Query: 558 VALYDINTEKPLQLFTDMHREPI 580
A+YDI + P+ + M+ PI
Sbjct: 253 QAIYDIRSSAPIAIKDHMYDAPI 275
>gi|449662375|ref|XP_002167085.2| PREDICTED: WD repeat-containing protein mio-A-like [Hydra
magnipapillata]
Length = 372
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 480 GGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTS 539
G + S + + WL+ P LVAG S +RLFD+ PK+ +AT + +
Sbjct: 208 GASESTVSVQWLQNKPRTLVAGQGSKWLRLFDIRSPDPKI--------LATT---KAING 256
Query: 540 VHVNSTDDQFLASGYSKNVALYDI-NTEKPL 569
+ V+ + +AS V ++DI N+EKPL
Sbjct: 257 ISVDKNNCNRIASFAEGAVLVWDIRNSEKPL 287
>gi|403214989|emb|CCK69489.1| hypothetical protein KNAG_0C03850 [Kazachstania naganishii CBS
8797]
Length = 503
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVIN-HENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
QF Y +P+++ TL GE I+ E N A + +C K P ++
Sbjct: 274 QFSYE--DPNVLFLVTLSGEFTTIDLREAKNTASVKFRRLADKKIGSMCINPKQPFQIAT 331
Query: 501 GSDSGCVRLFDLNHIPPK-----VADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYS 555
GS +R++D+ + K D + +ATY +++V + +DD + +GY
Sbjct: 332 GSLDRTMRIWDIRKLVDKPEWSQYEDFPSHEVIATYDSRLSVSAVSYSPSDDTLVCNGYD 391
Query: 556 KNVALYDIN 564
+ L+D++
Sbjct: 392 DTIRLFDVS 400
>gi|115437848|ref|XP_001217915.1| chromatin assembly factor 1 subunit C [Aspergillus terreus NIH2624]
gi|114188730|gb|EAU30430.1| chromatin assembly factor 1 subunit C [Aspergillus terreus NIH2624]
Length = 437
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V++ + G V + +G T GL W L
Sbjct: 147 YQPQNPNVIATMCTDGRVMIWDRSKHPSLPTGTVNPQMELLGHTKEGFGLSWSPHSQGHL 206
Query: 499 VAGSDSGCVRLFDL 512
V GS+ VRL+DL
Sbjct: 207 VTGSEDKTVRLWDL 220
>gi|115399056|ref|XP_001215117.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192000|gb|EAU33700.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 496
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V V + + + + V + W + L
Sbjct: 310 EELQWSPNERNVFASASSDGTVKVWDVRSKSRKPAVDVKVSNTDVNVMTWSNQTFHLLAT 369
Query: 501 GSDSGCVRLFDLNHIPPKVA--DARGNSSVATYYDF--EQLTSVHVNSTDDQFLASGYSK 556
G+D G ++DL H P + A+ S +DF E +TS+ + TDD +A G +
Sbjct: 370 GADDGQWAVWDLRHWKPNASAPSAQLKPSPVAAFDFHREPVTSIEWHPTDDSVVAVGSAD 429
Query: 557 N-VALYDINTE 566
N V L+D+ E
Sbjct: 430 NTVTLWDLAVE 440
>gi|171694055|ref|XP_001911952.1| hypothetical protein [Podospora anserina S mat+]
gi|170946976|emb|CAP73780.1| unnamed protein product [Podospora anserina S mat+]
Length = 448
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVIN------HENGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP ++A +DG V++ + G + IG T GL W P L
Sbjct: 150 YQPQNPDIIATLAVDGRVLIFDRTKHSLQPTGTPNPQLECIGHTQEGFGLDWSPDKPGWL 209
Query: 499 VAGSDSGCVRLFDLN 513
GS+ V ++DLN
Sbjct: 210 ATGSEDNTVMVWDLN 224
>gi|407923828|gb|EKG16891.1| hypothetical protein MPH_05872 [Macrophomina phaseolina MS6]
Length = 493
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAG 501
+ +++P+ ++ A DG V V + + + I V L W ++ L +G
Sbjct: 309 ELQWSPTEKNVFASAGNDGTVRVWDVRSKSRKPVITVQASKTDVNVLSWSRQTAHLLASG 368
Query: 502 SDSGCVRLFDLNHIPPKVADARGNSSVATYYDF--EQLTSVHVNSTDDQFLASGYSKN-V 558
+D G ++DL P A S +DF EQ+T V + TDD + N +
Sbjct: 369 ADDGQWAVWDLRQWKPSANGAPIKPSPVASFDFHKEQITCVEWHPTDDSIVMVAAGDNTL 428
Query: 559 ALYDINTE 566
L+D+ E
Sbjct: 429 TLWDLAVE 436
>gi|453086824|gb|EMF14865.1| WD40 repeat-like protein [Mycosphaerella populorum SO2202]
Length = 495
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++P+ ++ A + DG V + + + + + T+ L W + P L +
Sbjct: 310 EELQWSPTERNVFASASSDGTVKIWDARSKSRKHAVSVQVSTSDANVLSWSHQTPHLLAS 369
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFE--QLTSVHVNSTDDQFLAS-GYSKN 557
G D G ++DL + S ++ F Q+TSV + TDD +A G N
Sbjct: 370 GHDDGTWSVWDLRQWKSPDHQQKTTSKPIAHFAFHLGQITSVEWHPTDDSVVAVCGGDDN 429
Query: 558 VALYDINTE 566
+ L+D+ E
Sbjct: 430 LTLWDLAVE 438
>gi|169844779|ref|XP_001829110.1| glutamate-rich WD repeat containing 1 [Coprinopsis cinerea
okayama7#130]
gi|116509850|gb|EAU92745.1| glutamate-rich WD repeat containing 1 [Coprinopsis cinerea
okayama7#130]
Length = 513
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVIN---HENGNVACYIPSIGGTNSVLGLCWLKKYPSKLV 499
+++P+ P++ A + D V + + +VA P+ +V+ W K L+
Sbjct: 326 IQWSPTEPTVFASCSADRTVQIWDVRTKGRKSVAGIDPAHEADVNVI--SWNKLTSYLLL 383
Query: 500 AGSDSGCVRLFDLNHIPPKVADARGNSSVATY-YDFEQLTSVHVNSTDDQ-FLASGYSKN 557
+G D G ++++DL ++ K + S VA++ + +TS+ + ++D F ASG
Sbjct: 384 SGGDEGGIKVWDLRNVKQKGSTGPTPSPVASFNWHSAPITSIEWHPSEDSVFAASGADDQ 443
Query: 558 VALYDINTEK 567
V L+D+ EK
Sbjct: 444 VTLWDLAVEK 453
>gi|426201074|gb|EKV50997.1| hypothetical protein AGABI2DRAFT_189306 [Agaricus bisporus var.
bisporus H97]
Length = 511
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 445 YNPSNPSLMAFGTLDGEVIVIN--------HENGNVACYIPSIGGTNSVLGLCWLKKYPS 496
Y P NP L+A + GEV++ + G I +G GL W
Sbjct: 144 YMPQNPDLLATKAVTGEVLIFDRTKHSSEPERGGECKPDIRLVGQQREGYGLAWSPTKGG 203
Query: 497 KLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVN-----STDDQFLA 551
+++ S+ V L+D+N A RGN+S+ F TSV + + ++ F +
Sbjct: 204 RVLGASEDMTVCLWDIN------AYTRGNTSIEPVNIFRGHTSVVGDVDWHPTQENLFAS 257
Query: 552 SGYSKNVALYDINTE-KPLQLFTDMHREPINVA 583
G K + L+D + P Q RE + VA
Sbjct: 258 VGDDKMLMLWDTRAKIDPEQSIQAHDREILAVA 290
>gi|291222116|ref|XP_002731065.1| PREDICTED: leucine rich transmembrane and 0-methyltransferase
domain containing-like [Saccoglossus kowalevskii]
Length = 214
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 308 KYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSV 353
K ++ H +P+ EK YR+YM+ +LP + LD + I + DRE A +
Sbjct: 151 KSVTLHGNPLEEEKRYRQYMLTALPDIRALDFVTITKADRETAGVI 196
>gi|323508358|emb|CBQ68229.1| related to RRB1-involved in the regulation of ribosome biosynthesis
[Sporisorium reilianum SRZ2]
Length = 531
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 17/133 (12%)
Query: 444 EYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNS--VLGLCWLKKYPSKLVAG 501
+++P P++ A + D V V + + I S+ G ++ V + W + LV+G
Sbjct: 349 QWSPKEPTVFASCSADRSVRVWDVRVKSRRSVI-SVEGAHAQDVNVISWNRGTDYLLVSG 407
Query: 502 SDSGCVRLFDLNHIPPKVADARGNSSVA----TYYDFEQ--LTSVHVNSTDDQ-FLASGY 554
D G ++++DL H P NS+ A ++D+ + ++SV + T+D F A+G
Sbjct: 408 GDEGALKVWDLRHFKP-------NSTAAPAPVAHFDWHKAPISSVEWHPTEDSIFAAAGR 460
Query: 555 SKNVALYDINTEK 567
V L+D++ E+
Sbjct: 461 DDQVTLWDLSVEQ 473
>gi|389640235|ref|XP_003717750.1| ribosome assembly protein RRB1 [Magnaporthe oryzae 70-15]
gi|351640303|gb|EHA48166.1| ribosome assembly protein RRB1 [Magnaporthe oryzae 70-15]
gi|440475314|gb|ELQ43998.1| ribosome assembly protein RRB1 [Magnaporthe oryzae Y34]
gi|440484420|gb|ELQ64491.1| ribosome assembly protein RRB1 [Magnaporthe oryzae P131]
Length = 517
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++PS S+ A + DG V V + + + A + V W + L G
Sbjct: 335 IQWSPSEASVFASASSDGTVRVWDVRSKSRAAALTVKISDTDVNVASWSRLTTHLLATGD 394
Query: 503 DSGCVRLFDLNHIPPKVAD-ARGNSSVATY-YDFEQLTSVHVNSTDDQFLASGYSKN-VA 559
D+G ++DL P + A +S+A++ Y EQ+TS+ + +DD +A N V
Sbjct: 395 DNGTWAVWDLRQWKPSTNNKASTPTSIASFSYHKEQITSLEWHPSDDSIIAVAAGDNTVT 454
Query: 560 LYDINTE 566
L+D+ E
Sbjct: 455 LWDLAVE 461
>gi|440299678|gb|ELP92226.1| hypothetical protein EIN_118000 [Entamoeba invadens IP1]
Length = 1070
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 17/140 (12%)
Query: 434 GNKRVRPRQFEYNPSNPSLMAFGTLDG----EVIVINHENGNVACYIPSIGGTNSVLGLC 489
GN P+ Y+P+ P ++A +LD E V E+ N + Y P SV L
Sbjct: 767 GNSVYVPKCVLYHPTLPCVLADISLDTIGVFEYKVSQTESSNFSNYNPI---NTSVKYLD 823
Query: 490 WLKKYPSKLVAGSDSGCVRLF-DLNHIPPKVADARG-NSSVATYYDFEQLTSVHVNSTDD 547
WL K + LV+G G VRL+ D ++ P + RG V + F +T+ V
Sbjct: 824 WLDKNDAYLVSGCGDGSVRLWGDWDYKPKLITSWRGIPKPVVSQAVFTTMTNHRV----- 878
Query: 548 QFLASGYSKNVALYDINTEK 567
SG ++V ++D+ EK
Sbjct: 879 ---ISGEGESVFVWDVEYEK 895
>gi|348558780|ref|XP_003465194.1| PREDICTED: DNA damage-binding protein 2-like [Cavia porcellus]
Length = 423
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWP---------LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
R L KLG +AWP +H ++++ K R ++P++PS +A
Sbjct: 69 RVLHQHKLGVAAWPSLQQGLQQSFVHSLTAYRISQKASPFDRRATALAWHPAHPSTLAVA 128
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG S++GL + ++ A S G RL D
Sbjct: 129 SKGGDIMLWNFGVKDKPTFIKGIGAGGSIMGLKFNLLNSNQFYACSMEGTTRLQDF 184
>gi|148695604|gb|EDL27551.1| damage specific DNA binding protein 2, isoform CRA_b [Mus musculus]
Length = 344
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 420 LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSI 479
LH ++S+ K R ++P++PS +A G+ G++++ N + ++ I
Sbjct: 6 FLHSLASYQVFRKAAPFDRRTTSLAWHPTHPSTLAVGSKGGDIMIWNFGIKDKPIFLKGI 65
Query: 480 GGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
G S+ GL + ++ A S G RL D
Sbjct: 66 GAGGSITGLKFNHLNTNQFFASSMEGTTRLQDF 98
>gi|388581242|gb|EIM21551.1| WD40 repeat-like protein [Wallemia sebi CBS 633.66]
Length = 512
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 17/101 (16%)
Query: 498 LVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNS----TDDQFLASG 553
+VAG DSG V++FD+N + + T+ D +Q VHV S + L++
Sbjct: 94 VVAGDDSGLVQVFDIN----------SRAILRTFEDHKQ--PVHVTSFHPTEQTKVLSAS 141
Query: 554 YSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLL 594
+V L+DI ++ LQ F D H + + A FS SP L+
Sbjct: 142 DDCSVILHDIPSQSALQKF-DEHSDYVRTAAFSPSSPYLLV 181
>gi|149621607|ref|XP_001520407.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like,
partial [Ornithorhynchus anatinus]
Length = 127
Score = 41.6 bits (96), Expect = 1.2, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVA 500
+ YN ++ S++ + D V V + E G + + G S + C+ ++ P +
Sbjct: 23 ELHYN-TDGSMLFSASTDKTVAVWDSETGE---RVKRLKGHTSFVNSCYPARRGPQLVCT 78
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNV 558
GSD G V+L+D+ R ++V T+ + Q+ +V N T DQ ++ G ++
Sbjct: 79 GSDDGTVKLWDI----------RKKAAVQTFQNTYQVLAVTFNDTSDQIVSGGIDNDI 126
>gi|358055698|dbj|GAA98043.1| hypothetical protein E5Q_04724 [Mixia osmundae IAM 14324]
Length = 1551
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 420 LLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSI 479
+L+ S+ S IYK + + NPS P L+A G++ E+ + + + + Y P
Sbjct: 134 ILNGKSTDSMIYKTTHHTGPIKGLSSNPSAPHLLASGSIASEIYIWDLTSSPLKPYSPGA 193
Query: 480 GGTN--SVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
N + L W K P L +GS++G ++DL
Sbjct: 194 RSRNLDDITSLAWNNKVPHVLASGSNTGYTVVWDL 228
>gi|190896130|gb|ACE96578.1| U5 snRNP-specific protein-like factor [Populus tremula]
Length = 215
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 18/123 (14%)
Query: 449 NPSLMAFGTLDGEVIVINHENGNVACYIPSIGG--------TNSVLGLCWLKKYPSKLVA 500
N L GT DG I+ + V + G ++ V C ++ P +V+
Sbjct: 12 NAVLDLHGTADGSQIISASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVS 71
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G +L+DL R ++ T+ D Q+T+V + D+ G +V +
Sbjct: 72 GSDDGTSKLWDL----------RQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKV 121
Query: 561 YDI 563
+DI
Sbjct: 122 WDI 124
>gi|346976006|gb|EGY19458.1| ribosome assembly protein RRB1 [Verticillium dahliae VdLs.17]
Length = 492
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++PS S+ A + DG V + + + + + V L W ++ L +G+
Sbjct: 314 IQWSPSEQSVFASASSDGTVRIWDVRSKSRKPALTVQVSDTDVNVLSWSRQTTHLLASGA 373
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATY-YDFEQLTSVHVNSTDDQFLASGYSKN-VAL 560
D G ++DL H + +A++ Y EQ+TSV + +DD +A N V L
Sbjct: 374 DDGVFGVWDLRHWK---GTGDKPTPIASFDYHKEQITSVEWHPSDDSIIAVAAGDNTVTL 430
Query: 561 YDINTE 566
+D+ E
Sbjct: 431 WDLAVE 436
>gi|443927076|gb|ELU45608.1| kDa Trp-Asp repeats containing protein [Rhizoctonia solani AG-1 IA]
Length = 543
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 423 PVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENG----NVACYIPS 478
P + H + VR Q +PSNPSL+ G+ D V + + G + +
Sbjct: 153 PSETAIHTFASHTDYVRAGQV--SPSNPSLILTGSYDATVRLFDARTGTCTMTMGADLAR 210
Query: 479 IGGTNSVLGLCWLKKYPSKLVAGSDSG-CVRLFDLNHIPPKVADARGNSSVATYYDFEQL 537
+G SVL +PS +A + +G +R +DL VA R +++ + + +
Sbjct: 211 VGPVESVL------MFPSGSLAVAATGNIIRAWDL------VAGGRCIRALSNHQ--KSI 256
Query: 538 TSVHVNSTDDQFLASGYSKNVALYDINTEK 567
TS+ + T + L G + V +YDI T +
Sbjct: 257 TSLAFDGTASRLLTGGLDQLVKVYDITTYR 286
>gi|302409003|ref|XP_003002336.1| ribosome assembly protein RRB1 [Verticillium albo-atrum VaMs.102]
gi|261359257|gb|EEY21685.1| ribosome assembly protein RRB1 [Verticillium albo-atrum VaMs.102]
Length = 492
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++PS S+ A + DG V + + + + + V L W ++ L +G+
Sbjct: 314 IQWSPSEQSVFASASSDGTVRIWDVRSKSRKPALTVQVSDTDVNVLSWSRQTTHLLASGA 373
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATY-YDFEQLTSVHVNSTDDQFLASGYSKN-VAL 560
D G ++DL H + +A++ Y EQ+TSV + +DD +A N V L
Sbjct: 374 DDGVFGVWDLRHWK---GTGDKPTPIASFDYHKEQITSVEWHPSDDSIIAVAAGDNTVTL 430
Query: 561 YDINTE 566
+D+ E
Sbjct: 431 WDLAVE 436
>gi|190896128|gb|ACE96577.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896132|gb|ACE96579.1| U5 snRNP-specific protein-like factor [Populus tremula]
Length = 215
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 18/123 (14%)
Query: 449 NPSLMAFGTLDGEVIVINHENGNVACYIPSIGG--------TNSVLGLCWLKKYPSKLVA 500
N L GT DG I+ + V + G ++ V C ++ P +V+
Sbjct: 12 NAVLDLHGTADGSQIISASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVS 71
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
GSD G +L+DL R ++ T+ D Q+T+V + D+ G +V +
Sbjct: 72 GSDDGTSKLWDL----------RQKGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKV 121
Query: 561 YDI 563
+DI
Sbjct: 122 WDI 124
>gi|405946069|gb|EKC17557.1| U2 small nuclear ribonucleoprotein A' [Crassostrea gigas]
Length = 155
Score = 41.2 bits (95), Expect = 1.5, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 302 ANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVF 354
+N+K +++S +P+ +KHYR Y++ +PQL VLD I + +RE A +F
Sbjct: 11 SNLKSLQHLSLLRNPVQSKKHYRLYIVHKIPQLRVLDFQRIRQKEREAAAKMF 63
>gi|146414161|ref|XP_001483051.1| hypothetical protein PGUG_05006 [Meyerozyma guilliermondii ATCC
6260]
gi|146392750|gb|EDK40908.1| hypothetical protein PGUG_05006 [Meyerozyma guilliermondii ATCC
6260]
Length = 508
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 11/158 (6%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++ ++ A G DG V + + + I T V + W +K L +G
Sbjct: 325 IQWSTGESTVFATGGTDGYVRIWDTRSKKHKPAISVAASTTDVNVISWCEKINYLLASGH 384
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQFLA-SGYSKNVA 559
D G ++DL K+ + + S YDF + +TS+ N D+ LA S V
Sbjct: 385 DDGSWSIWDLR----KLFNGKEQPSPVANYDFHKSPITSISFNPLDESILAVSSEDNTVT 440
Query: 560 LYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLH 597
L+D+ E + + N K H P LL +H
Sbjct: 441 LWDLAVEADDEEIKNQR----NDFKELHDIPPQLLFVH 474
>gi|323447388|gb|EGB03311.1| hypothetical protein AURANDRAFT_72762 [Aureococcus anophagefferens]
Length = 297
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 13/156 (8%)
Query: 447 PSNPSLMAFGTLDGEVIVIN-------HENGNVACYIPSIGGTNSVLGLCWLKKYPSKLV 499
P NP ++A + EV V + ++G+ G T GL W +L+
Sbjct: 95 PQNPFILATKSPSSEVHVFDVSKHPSVPKDGSFRPEHQCTGHTKEGYGLSWNPHIAGQLL 154
Query: 500 AGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVA 559
+GSD G + L+D+N K+A S+ + D + S H ++ F + G + +
Sbjct: 155 SGSDDGSICLWDINQACMKIA---ALSTWQDHVDVVEDVSWHAHNP-HVFGSVGDDRQLL 210
Query: 560 LYDINTEK--PLQLFTDMHREPINVAKFSHHSPLCL 593
L+D ++ P T H IN F+ H L
Sbjct: 211 LWDARNKQQDPFARVTAAHCADINAIAFNQHHEFLL 246
>gi|358397255|gb|EHK46630.1| hypothetical protein TRIATDRAFT_218754 [Trichoderma atroviride IMI
206040]
Length = 486
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++PS S+ A + DG V + + + + I V + W + + L +
Sbjct: 306 EEIQWSPSEQSVFASASSDGTVRIWDVRSKSRKPAITVQVSNYDVNVMSWSRHTTNLLAS 365
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKN-VA 559
G+D G ++DL K D++ + Y EQ+ S+ + TDD +A + N V
Sbjct: 366 GADDGTWAVWDLRQW--KGNDSKPQPVASFNYHKEQICSIEWHPTDDSIIALAAADNTVT 423
Query: 560 LYDINTE 566
L+D+ E
Sbjct: 424 LWDLAVE 430
>gi|195429780|ref|XP_002062935.1| GK21663 [Drosophila willistoni]
gi|194159020|gb|EDW73921.1| GK21663 [Drosophila willistoni]
Length = 410
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 15/122 (12%)
Query: 480 GGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTS 539
G S+ GL +L P+ L+ GS G VRLFDL AR ++ E +TS
Sbjct: 107 GSKVSICGLRFLDDTPNLLLVGSTDGPVRLFDLR---TSAEQARYEYKTQSFDVPESITS 163
Query: 540 VHVNSTD-------DQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSP-- 590
N+ +Q++++ + + +D+ T K + F + H + + +F +P
Sbjct: 164 FDSNANGRIICCGTEQYMSNTF---LLFFDVRTRKQMGAFFESHEKDVTSVRFHKSNPDL 220
Query: 591 LC 592
LC
Sbjct: 221 LC 222
>gi|390604627|gb|EIN14018.1| glutamate-rich WD repeat-containing protein [Punctularia
strigosozonata HHB-11173 SS5]
Length = 513
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVIN-HENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAG 501
+++PS P++ A + D V + + G + V + W K L++G
Sbjct: 325 IQWSPSEPTVFASCSADHSVQLWDVRSKGRRSVAGIDEAHETDVNVISWNKNTSYMLLSG 384
Query: 502 SDSGCVRLFDLNHIPPKVADARGNSSVATY-YDFEQLTSVHVNSTDDQ-FLASGYSKNVA 559
D G ++++DL ++ + + + VA++ + +TS+ + T+D F ASG +
Sbjct: 385 GDEGGIKVWDLRNVQKRGSSTPSAAPVASFNWHTGPITSIEWHPTEDSIFAASGADDQIT 444
Query: 560 LYDINTEK 567
L+D+ E+
Sbjct: 445 LWDLAVEQ 452
>gi|161598609|ref|YP_001573824.1| pyridoxal-phosphate dependent enzyme [Bacillus thuringiensis
serovar israelensis]
gi|228905302|ref|ZP_04069284.1| Pyridoxal-phosphate dependent enzyme [Bacillus thuringiensis IBL
4222]
gi|21685476|emb|CAD30138.1| Pyridoxal-phosphate dependent enzyme [Bacillus thuringiensis
serovar israelensis]
gi|228854339|gb|EEM99015.1| Pyridoxal-phosphate dependent enzyme [Bacillus thuringiensis IBL
4222]
Length = 346
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 427 FSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVL 486
I KE + PRQ+E N NP+ A+ +L E + E G++ + S+G S+
Sbjct: 130 LEEILKENKEAFCPRQYE-NSDNPN--AYESLADEAL---EELGHIDILVASVGSGGSLC 183
Query: 487 GLC-WLKKY-PSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVH 541
G LKK P V D+ +F+ IP ++ GNS + DF + VH
Sbjct: 184 GTARALKKANPDLRVVAVDAVGSVIFNQPDIPGRLQGGHGNSVIPKNVDFSIIDEVH 240
>gi|145518786|ref|XP_001445265.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412709|emb|CAK77868.1| unnamed protein product [Paramecium tetraurelia]
Length = 344
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 453 MAFGTLDGEVIV--INHENGNVACY------IPSIGGTNSVLGLCWLKKYPSKLVAGSDS 504
+A GTLDG+V+V IN N + I G + S+ + +L P ++AGS
Sbjct: 96 VACGTLDGKVLVYEINQSNKKGKSFSKDKPNIELFGHSGSIQCVQFLS--PQYIIAGSTD 153
Query: 505 GCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSK-NVALYDI 563
V L+DL + +A + ++ + S+H D SG S ++DI
Sbjct: 154 SLVSLWDLENPQRYLAIHQQHTG--------DVLSLHAYENDSNIFISGSSDLTCKIWDI 205
Query: 564 NTEKPLQLFTDMHREPINVAKF 585
+KP+Q H +N KF
Sbjct: 206 RVKKPVQAEYKGHESAVNTVKF 227
>gi|444707593|gb|ELW48858.1| DNA damage-binding protein 2 [Tupaia chinensis]
Length = 427
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Query: 406 RSLSAAKLGSSAWPLLH---------PVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFG 456
+++ KLG + WP L ++S+ K R ++P++PS +A G
Sbjct: 71 KAIDQYKLGRATWPSLQQGLQQSFSNSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAVG 130
Query: 457 TLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDL 512
+ G++++ N + +I IG S+ G+ + + S G RL D
Sbjct: 131 SKGGDILLWNFGIKDTPTFIKGIGAGGSITGMKFNPLNTDQFFTSSMEGMTRLQDF 186
>gi|145242534|ref|XP_001393840.1| histone acetyltransferase type B subunit 2 [Aspergillus niger CBS
513.88]
gi|134078391|emb|CAK40381.1| unnamed protein product [Aspergillus niger]
gi|350640139|gb|EHA28492.1| WD-40 repeat protein [Aspergillus niger ATCC 1015]
gi|358371672|dbj|GAA88279.1| chromatin assembly factor 1 subunit C [Aspergillus kawachii IFO
4308]
Length = 436
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHE------NGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A DG V++ + G V + +G T GL W L
Sbjct: 146 YQPQNPNIIATMCTDGRVMIWDRSKHPSLPTGTVNPQMELLGHTREGFGLSWSPHTTGHL 205
Query: 499 VAGSDSGCVRLFDL 512
GS+ VRL+DL
Sbjct: 206 ATGSEDKTVRLWDL 219
>gi|434379598|ref|YP_006613973.1| pyridoxal-phosphate dependent enzyme [Bacillus thuringiensis
HD-789]
gi|401878322|gb|AFQ30486.1| pyridoxal-phosphate dependent enzyme [Bacillus thuringiensis
HD-789]
Length = 345
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 427 FSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVL 486
I KE + PRQ+E N NP+ A+ +L E + E G++ + S+G S+
Sbjct: 129 LEEILKENKEAFCPRQYE-NSDNPN--AYESLADEAL---EELGHIDILVASVGSGGSLC 182
Query: 487 GLC-WLKKY-PSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVH 541
G LKK P V D+ +F+ IP ++ GNS + DF + VH
Sbjct: 183 GTARALKKANPDLRVVAVDAVGSVIFNQPDIPGRLQGGHGNSVIPKNVDFSIIDEVH 239
>gi|27374366|gb|AAO01105.1| CG12134-PA [Drosophila willistoni]
Length = 409
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 15/122 (12%)
Query: 480 GGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTS 539
G S+ GL +L P+ L+ GS G VRLFDL AR ++ E +TS
Sbjct: 106 GSKVSICGLRFLDDTPNLLLVGSTDGPVRLFDLR---TSAEQARYEYKTQSFDVPESITS 162
Query: 540 VHVNSTD-------DQFLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFSHHSP-- 590
N+ +Q++++ + + +D+ T K + F + H + + +F +P
Sbjct: 163 FDSNANGRIICCGTEQYMSNTF---LLFFDVRTRKQMGAFFESHEKDVTSVRFHKSNPDL 219
Query: 591 LC 592
LC
Sbjct: 220 LC 221
>gi|156395617|ref|XP_001637207.1| predicted protein [Nematostella vectensis]
gi|156224317|gb|EDO45144.1| predicted protein [Nematostella vectensis]
Length = 247
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 297 QDLMD----ANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKS 352
Q+L D +VK +Y+S +P+ + HYR ++I SLPQL VLD I +R+ AK
Sbjct: 100 QELKDLEPLESVKSLRYLSLLRNPVTNKPHYRLFVINSLPQLRVLDFQRIKMRERDAAKR 159
Query: 353 VFA 355
+F+
Sbjct: 160 MFS 162
>gi|408400395|gb|EKJ79477.1| hypothetical protein FPSE_00408 [Fusarium pseudograminearum CS3096]
Length = 492
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++PS S+ A + DG + + + + + I V + W ++ L +
Sbjct: 312 EELQWSPSEASVFASASSDGTIRIWDVRSKSRKAAITMQVSDVDVNVMSWSRQQTHLLAS 371
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKN-VA 559
G D+G ++DL K + + + + EQ+TSV + TDD +A N V
Sbjct: 372 GDDNGTWAVWDLRQW--KASSEKPQPIASFNFHKEQITSVEWHPTDDSIVAVAAGDNTVT 429
Query: 560 LYDINTE 566
L+D+ E
Sbjct: 430 LWDLAVE 436
>gi|260804769|ref|XP_002597260.1| hypothetical protein BRAFLDRAFT_118148 [Branchiostoma floridae]
gi|229282523|gb|EEN53272.1| hypothetical protein BRAFLDRAFT_118148 [Branchiostoma floridae]
Length = 417
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCW-LKKYPSKLVAGSD 503
YNP + + +A T + I EN + +GG G C + S++VAGS
Sbjct: 27 YNPQDDNFIAVTTSTENKLRICKENSQSFPHTFDLGGA----GTCTDFSRDGSRVVAGST 82
Query: 504 SGCVRLF-DLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYD 562
S + L ++N P+ G++S + +VH + T+ L+SG+S + ++D
Sbjct: 83 SSDILLVTNINAETPEPVHLHGHTST--------IRNVHFHPTNSLLLSSGWSDGIRVWD 134
Query: 563 INTEK 567
+NT++
Sbjct: 135 VNTQQ 139
>gi|190896150|gb|ACE96588.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896152|gb|ACE96589.1| U5 snRNP-specific protein-like factor [Populus tremula]
Length = 215
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 492 KKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLA 551
++ P +V+GSD G +L+DL H ++ T+ D Q+T+V + D+
Sbjct: 63 RRGPPLVVSGSDDGTSKLWDLRH----------KGAIQTFPDKYQITAVSFSDASDKIFT 112
Query: 552 SGYSKNVALYDI 563
G +V ++DI
Sbjct: 113 GGIDNDVKVWDI 124
>gi|290991217|ref|XP_002678232.1| hypothetical protein NAEGRDRAFT_48518 [Naegleria gruberi]
gi|284091843|gb|EFC45488.1| hypothetical protein NAEGRDRAFT_48518 [Naegleria gruberi]
Length = 1446
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
Query: 444 EYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSD 503
+++P+N +++A G D V V N N N A G T V + W P+ L +GS+
Sbjct: 672 QWHPTNKNIIATGCHDHIVRVFNINNPNDAPISILKGHTAEVFNVTWHPTIPNVLASGSN 731
Query: 504 SGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDI 563
+R++D + KV + A +++E + L+ + + ++D
Sbjct: 732 DKTIRIWDSDTGNSKVLKGHTHYVRALAWNYE---------VSNILLSGSWDGTIRVWDT 782
Query: 564 NTEKPLQLFTDMHRE 578
E + + D H +
Sbjct: 783 KKECQIAVSNDHHAD 797
>gi|302835942|ref|XP_002949532.1| hypothetical protein VOLCADRAFT_104320 [Volvox carteri f.
nagariensis]
gi|300265359|gb|EFJ49551.1| hypothetical protein VOLCADRAFT_104320 [Volvox carteri f.
nagariensis]
Length = 313
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 35/48 (72%)
Query: 308 KYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFA 355
+++S H +P+ + +YR Y+I+ LP+L+VLD + + +R+ AK++F+
Sbjct: 129 EHLSLHGNPVMTKANYRLYVISKLPRLKVLDFKKVKQKERDAAKAMFS 176
>gi|297821270|ref|XP_002878518.1| EMB2221 [Arabidopsis lyrata subsp. lyrata]
gi|297324356|gb|EFH54777.1| EMB2221 [Arabidopsis lyrata subsp. lyrata]
Length = 1104
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 14/145 (9%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLG-----LCWLKKYP 495
R E+N NP+L+A G DGE+ + + + + P + G+ S + W +K
Sbjct: 126 RGLEFNAINPNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQ 185
Query: 496 SKLVAGSDSGCVRLFDLNHIPPKV--ADARGNSSVATYYDFEQLTSVHVNSTDDQFLASG 553
L + S +G ++DL P + AD+ ++ T + V S DD
Sbjct: 186 QILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNITTQIMVASDDDS----- 240
Query: 554 YSKNVALYDI-NTEKPLQLFTDMHR 577
S + L+D+ N P++ FT R
Sbjct: 241 -SPTLKLWDMRNILSPVREFTGHQR 264
>gi|46111637|ref|XP_382876.1| hypothetical protein FG02700.1 [Gibberella zeae PH-1]
Length = 490
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++PS S+ A + DG + + + + + I V + W ++ L +
Sbjct: 310 EELQWSPSEASVFASASSDGTIRIWDVRSKSRKAAITMQVSDVDVNVMSWSRQQTHLLAS 369
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKN-VA 559
G D+G ++DL K + + + + EQ+TSV + TDD +A N V
Sbjct: 370 GDDNGTWAVWDLRQW--KASSEKPQPIASFNFHKEQITSVEWHPTDDSIVAVAAGDNTVT 427
Query: 560 LYDINTE 566
L+D+ E
Sbjct: 428 LWDLAVE 434
>gi|406861680|gb|EKD14733.1| WD domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 442
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIVIN------HENGNVACYIPSIGGTNSVLGLCWLKKYPSKL 498
Y P NP+++A G V++ + + G V+ +G T GLCW +KL
Sbjct: 152 YQPQNPNMIATMAPGGRVLIFDRTKHSSNPKGVVSPDAELVGHTEEGFGLCWNPHEAAKL 211
Query: 499 VAGSDSGCVRLFDL 512
GS VRL+D+
Sbjct: 212 ATGSRDMTVRLWDV 225
>gi|366994544|ref|XP_003677036.1| hypothetical protein NCAS_0F01970 [Naumovozyma castellii CBS 4309]
gi|342302904|emb|CCC70681.1| hypothetical protein NCAS_0F01970 [Naumovozyma castellii CBS 4309]
Length = 511
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 26/129 (20%)
Query: 488 LCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNST 545
+ W +K L +G D+G ++DL P+ A G+ YDF + +TS+ N
Sbjct: 372 ISWSEKLGYLLASGDDNGTWGVWDLRQFSPENA---GSVQPVAQYDFHKGAITSISFNPL 428
Query: 546 DDQFLASGYSKN-VALYDINTE-------------KPLQ------LFTDMHREPINVAKF 585
D+ +A G N V L+D++ E K LQ LF +E +V K+
Sbjct: 429 DESIIAVGSEDNTVTLWDLSVEADDEEIKQQAAETKELQQIPPQLLFVHWQKEVKDV-KW 487
Query: 586 SHHSPLCLL 594
P CL+
Sbjct: 488 HKQIPGCLV 496
>gi|301095607|ref|XP_002896903.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108550|gb|EEY66602.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 469
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 309 YISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVF 354
Y+ +P +E +REY+IASLPQL +LD I R DR A VF
Sbjct: 122 YMLGNPCQSDWETGFREYIIASLPQLGILDGKEIHRSDRIKALQVF 167
>gi|148232048|ref|NP_001087863.1| small nuclear ribonucleoprotein polypeptide A' [Xenopus laevis]
gi|51950159|gb|AAH82389.1| MGC81833 protein [Xenopus laevis]
Length = 255
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 309 YISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVF 354
Y+S +P+ ++HYR Y+I +PQ+ VLD + + +RE A ++F
Sbjct: 117 YVSLLRNPVTSKRHYRMYLIYKVPQIRVLDFQKVKQTEREEAANMF 162
>gi|126342899|ref|XP_001373836.1| PREDICTED: DNA damage-binding protein 2-like [Monodelphis
domestica]
Length = 486
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
E++P++PS +A G+ G+VI+ ++E + C+I IG + G+ + ++L S
Sbjct: 117 LEWHPTHPSTLAVGSKGGDVILWDYEVLDKICFIKGIGAGGCITGMKFNPLNTNQLFFSS 176
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYD 562
G L D +V AR N+ Y TSV V++T+ + NV L +
Sbjct: 177 VEGSTILKDFVGNTIRVF-ARTNTWDNWY------TSVDVSATNRVVVTGDSVGNVILLN 229
Query: 563 INTEKPLQLFTDMHREPINVAKFSHH 588
++ ++ L +H++ ++ + H
Sbjct: 230 MDGKEVWNL--RLHKKKVSHVALNPH 253
>gi|118369684|ref|XP_001018045.1| hypothetical protein TTHERM_00954220 [Tetrahymena thermophila]
gi|89299812|gb|EAR97800.1| hypothetical protein TTHERM_00954220 [Tetrahymena thermophila
SB210]
Length = 449
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAG 501
+ +YNPS +L+A +D V++ + G+ A I I +N +CW P L+ G
Sbjct: 202 KVKYNPSQFNLIAGTGIDRSVVLYDTR-GDTA--IQKIFLSNKCQTICWNPTEPVNLIVG 258
Query: 502 SDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALY 561
D G FD+ + A + D + + T +F+ Y K + ++
Sbjct: 259 CDDGNCYSFDMRKMEQ--AKMIHKDHIGAVMDLD------IAPTGRKFVTGSYDKTIRIF 310
Query: 562 DINTEKPLQLF 572
D+ K +++
Sbjct: 311 DVEKGKSEEIY 321
>gi|159477885|ref|XP_001697039.1| COP-II coat subunit [Chlamydomonas reinhardtii]
gi|158274951|gb|EDP00731.1| COP-II coat subunit [Chlamydomonas reinhardtii]
Length = 1313
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLG---------LCWL 491
+ E+N +P+L+A G D ++ + + P++ G G L W
Sbjct: 129 KGLEFNSFSPNLLASGAADSDLCIWDVAKPAQPSLYPALKGGAGTPGSAAGGEITYLAWN 188
Query: 492 KKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNS---SVATYYDFEQLTSVHVNSTDDQ 548
KK L + S +G ++DL P ++ NS + A ++ + T + V S DD+
Sbjct: 189 KKVQHILASCSTNGTTVVWDLKRQKPVISFRDPNSQRRASAIQWNPDIATQLIVASDDDR 248
Query: 549 FLASGYSKNVALYDI-NTEKPLQLFTDMHREPINVAKFSHHSPLCL 593
S + ++D+ N+ PL+ F H+ +++A H S L L
Sbjct: 249 ------SPTLQMWDLRNSVSPLKEFVGHHKGVLSMAWSPHDSSLLL 288
>gi|409050496|gb|EKM59973.1| hypothetical protein PHACADRAFT_138334 [Phanerochaete carnosa
HHB-10118-sp]
Length = 530
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKK---YPSK 497
R + PSNPSL+ G+ D V + + G + G +++ +PS
Sbjct: 170 RSGQVAPSNPSLILTGSYDATVRLFDARTGECEMVMGGSSGEGGGRNTAPVEQVLMFPSG 229
Query: 498 LVAGSDSGCV-RLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSK 556
VA S +G + R++DL VA R +++ + + +T++ N + + L G +
Sbjct: 230 TVALSSAGPILRVWDL------VAGGRCTRAISNHQ--KTITAMAFNGSTSRLLTGGLDQ 281
Query: 557 NVALYDINTEK 567
V +YD++T K
Sbjct: 282 MVKVYDVSTYK 292
>gi|374580977|ref|ZP_09654071.1| Leucine Rich Repeat (LRR)-containing protein [Desulfosporosinus
youngiae DSM 17734]
gi|374417059|gb|EHQ89494.1| Leucine Rich Repeat (LRR)-containing protein [Desulfosporosinus
youngiae DSM 17734]
Length = 1024
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 101 KLRVVDLSNITLRNDNLLDLCQVGSSCHVLILRATNIRKLNMVGRFMHLNTLSLDFCSSL 160
KL +++SN ++N + C + +S +R+ NI +L VG HL TL + +++
Sbjct: 281 KLETLNMSNTVIKN---VPGCYIPASLKQFHMRSCNIEELKGVGALEHLETLDISL-TAI 336
Query: 161 ASLHEDCFSCMPYLMCLSMCETRIVNLWTTTAAISKLPYL 200
L E+ C+ L L + T+I L ++ L YL
Sbjct: 337 KELPEEMV-CIKTLKYLDIGNTKITKLREWITKLTNLKYL 375
>gi|256270447|gb|EEU05642.1| Rrb1p [Saccharomyces cerevisiae JAY291]
Length = 511
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++ + ++ A DG + + + + I V + W K L +G
Sbjct: 327 IQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSDKIGYLLASGD 386
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQFLASGYSKN-VA 559
D+G ++DL P ADA YDF + +TS+ N D+ +A G N V
Sbjct: 387 DNGTWGVWDLRQFTPSNADA---VQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVT 443
Query: 560 LYDINTE 566
L+D++ E
Sbjct: 444 LWDLSVE 450
>gi|323347203|gb|EGA81478.1| Rrb1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 511
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++ + ++ A DG + + + + I V + W K L +G
Sbjct: 327 IQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSDKIGYLLASGD 386
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQFLASGYSKN-VA 559
D+G ++DL P ADA YDF + +TS+ N D+ +A G N V
Sbjct: 387 DNGTWGVWDLRQFTPSNADA---VQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVT 443
Query: 560 LYDINTE 566
L+D++ E
Sbjct: 444 LWDLSVE 450
>gi|151945833|gb|EDN64065.1| regulator of ribosome biogenesis [Saccharomyces cerevisiae YJM789]
gi|259148707|emb|CAY81952.1| Rrb1p [Saccharomyces cerevisiae EC1118]
gi|323332083|gb|EGA73494.1| Rrb1p [Saccharomyces cerevisiae AWRI796]
gi|323336095|gb|EGA77367.1| Rrb1p [Saccharomyces cerevisiae Vin13]
gi|323353100|gb|EGA85400.1| Rrb1p [Saccharomyces cerevisiae VL3]
Length = 511
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++ + ++ A DG + + + + I V + W K L +G
Sbjct: 327 IQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSDKIGYLLASGD 386
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQFLASGYSKN-VA 559
D+G ++DL P ADA YDF + +TS+ N D+ +A G N V
Sbjct: 387 DNGTWGVWDLRQFTPSNADA---VQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVT 443
Query: 560 LYDINTE 566
L+D++ E
Sbjct: 444 LWDLSVE 450
>gi|392297293|gb|EIW08393.1| Rrb1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 511
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++ + ++ A DG + + + + I V + W K L +G
Sbjct: 327 IQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSDKIGYLLASGD 386
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQFLASGYSKN-VA 559
D+G ++DL P ADA YDF + +TS+ N D+ +A G N V
Sbjct: 387 DNGTWGVWDLRQFTPSNADA---VQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVT 443
Query: 560 LYDINTE 566
L+D++ E
Sbjct: 444 LWDLSVE 450
>gi|349580415|dbj|GAA25575.1| K7_Rrb1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 511
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++ + ++ A DG + + + + I V + W K L +G
Sbjct: 327 IQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSDKIGYLLASGD 386
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQFLASGYSKN-VA 559
D+G ++DL P ADA YDF + +TS+ N D+ +A G N V
Sbjct: 387 DNGTWGVWDLRQFTPSNADA---VQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVT 443
Query: 560 LYDINTE 566
L+D++ E
Sbjct: 444 LWDLSVE 450
>gi|323303551|gb|EGA57343.1| Rrb1p [Saccharomyces cerevisiae FostersB]
gi|323307757|gb|EGA61020.1| Rrb1p [Saccharomyces cerevisiae FostersO]
Length = 511
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++ + ++ A DG + + + + I V + W K L +G
Sbjct: 327 IQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSDKIGYLLASGD 386
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQFLASGYSKN-VA 559
D+G ++DL P ADA YDF + +TS+ N D+ +A G N V
Sbjct: 387 DNGTWGVWDLRQFTPSNADA---VQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVT 443
Query: 560 LYDINTE 566
L+D++ E
Sbjct: 444 LWDLSVE 450
>gi|6323779|ref|NP_013850.1| Rrb1p [Saccharomyces cerevisiae S288c]
gi|2494913|sp|Q04225.1|RRB1_YEAST RecName: Full=Ribosome assembly protein RRB1
gi|728670|emb|CAA88556.1| unknown [Saccharomyces cerevisiae]
gi|285814133|tpg|DAA10028.1| TPA: Rrb1p [Saccharomyces cerevisiae S288c]
Length = 511
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++ + ++ A DG + + + + I V + W K L +G
Sbjct: 327 IQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSDKIGYLLASGD 386
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQFLASGYSKN-VA 559
D+G ++DL P ADA YDF + +TS+ N D+ +A G N V
Sbjct: 387 DNGTWGVWDLRQFTPSNADA---VQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVT 443
Query: 560 LYDINTE 566
L+D++ E
Sbjct: 444 LWDLSVE 450
>gi|321460280|gb|EFX71324.1| hypothetical protein DAPPUDRAFT_60299 [Daphnia pulex]
Length = 255
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 309 YISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVF 354
Y+S +P+ ++HYR Y+I LP L VLD + +RE A+ +F
Sbjct: 117 YLSLLSNPVANKQHYRSYVINKLPSLRVLDFRKVKLKEREAARDLF 162
>gi|365763850|gb|EHN05376.1| Rrb1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 511
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++ + ++ A DG + + + + I V + W K L +G
Sbjct: 327 IQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSDKIGYLLASGD 386
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQFLASGYSKN-VA 559
D+G ++DL P ADA YDF + +TS+ N D+ +A G N V
Sbjct: 387 DNGTWGVWDLRQFTPSNADA---VQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVT 443
Query: 560 LYDINTE 566
L+D++ E
Sbjct: 444 LWDLSVE 450
>gi|302833086|ref|XP_002948107.1| hypothetical protein VOLCADRAFT_120559 [Volvox carteri f.
nagariensis]
gi|300266909|gb|EFJ51095.1| hypothetical protein VOLCADRAFT_120559 [Volvox carteri f.
nagariensis]
Length = 1302
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSI----GGTNSVLG-----LCWL 491
+ E+N +P+L+A G D ++ + + + P++ G S +G L W
Sbjct: 89 KGLEFNGFSPNLLASGAADSDLCIWDLTKPSTPSLYPALKGGAGAPGSAVGGEITYLAWN 148
Query: 492 KKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNS---SVATYYDFEQLTSVHVNSTDDQ 548
+K L + S +G ++DL P ++ NS + A ++ + T + V S DD+
Sbjct: 149 RKVQHILASCSTNGTTVVWDLKRQKPVISFRDTNSQRRASAIQWNPDIATQLIVASDDDR 208
Query: 549 FLASGYSKNVALYDI-NTEKPLQLFTDMHREPINVAKFSHHSPLCL 593
S + ++D+ N+ PL+ F H+ + +A H S L L
Sbjct: 209 ------SPTLQMWDLRNSVSPLKEFVGHHKGVLALAWSPHDSSLLL 248
>gi|389744115|gb|EIM85298.1| hypothetical protein STEHIDRAFT_140018, partial [Stereum hirsutum
FP-91666 SS1]
Length = 876
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 464 VINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADAR 523
+IN + G V+ P + G + +V+G D G VR++ LN A+
Sbjct: 576 IINMDEGEVSG--PLLVGHTDTINCIAFSSQAEMIVSGGDDGTVRVWSLN--------AQ 625
Query: 524 GNSSVATYYDFEQLTSVHVNSTDDQFLASG-YSKNVALYDINTEKPLQLFTDMHREPINV 582
SV+ +TSV V S D LASG +++ ++D +T +P + H P+
Sbjct: 626 EVLSVSLEGHESAVTSVAV-SPDGHILASGSLDRSIRIWDAHTHQPRGNLLEGHTGPVYS 684
Query: 583 AKFSHHSPLCL 593
FS + +
Sbjct: 685 IAFSAQGTMII 695
>gi|339239393|ref|XP_003381251.1| WD repeat-containing protein 57 [Trichinella spiralis]
gi|316975732|gb|EFV59133.1| WD repeat-containing protein 57 [Trichinella spiralis]
Length = 622
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 492 KKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLA 551
++ P + +GSD G + KV D R + ++ + Q+T+V N T +Q ++
Sbjct: 425 RRGPQLVCSGSDDGTI----------KVWDRRQKKCIYSFENVYQVTAVTFNDTAEQIVS 474
Query: 552 SGYSKNVALYDINTEKPL 569
G ++ ++DI E P+
Sbjct: 475 GGIENDLKIWDIRKESPM 492
>gi|47551119|ref|NP_999734.1| katanin p80 WD40 repeat-containing subunit B1 [Strongylocentrotus
purpuratus]
gi|60390160|sp|O61585.1|KTNB1_STRPU RecName: Full=Katanin p80 WD40 repeat-containing subunit B1;
Short=Katanin p80 subunit B1; AltName: Full=p80 katanin
gi|3005601|gb|AAC09329.1| katanin p80 subunit [Strongylocentrotus purpuratus]
Length = 690
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 21/148 (14%)
Query: 448 SNPSLMAFGTLDGEVIVINHENGNVACY-------IPSIGGTNSVLGLCWLKKYPSKLVA 500
SN + +A G + G V+V E+ V + I S+ G S + +VA
Sbjct: 17 SNVNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFNSSEELVVA 76
Query: 501 GSDSGCVRLFDLNHIPPKVADA-RGNSSVATYYDFEQLTSVHVNSTDDQFLASGYS-KNV 558
GS SG ++++DL P K+ G+ + DF +F+ASG + NV
Sbjct: 77 GSQSGTMKIYDLE--PAKIVRTLTGHRNSIRCMDFHPF---------GEFVASGSTDTNV 125
Query: 559 ALYDINTEKPLQLFTDMHREPINVAKFS 586
L+D+ + + + H + +N+ KFS
Sbjct: 126 KLWDVRRKGCIYTYKG-HSDQVNMIKFS 152
>gi|451999877|gb|EMD92339.1| hypothetical protein COCHEDRAFT_1134770 [Cochliobolus
heterostrophus C5]
Length = 334
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 496 SKLVAGSDSGCVRLFDLNHIPP-KVADAR------GNSSVATYYDFEQLTSVHVNSTDDQ 548
S ++ GS +RL++ H PP VA + G + T + +E L S+ VN +D+
Sbjct: 29 SYILTGSSDRTIRLYNPKHAPPTSVAPTQSAQRPPGLVNKYTAHGYEVL-SLDVNHANDK 87
Query: 549 FLASGYSKNVALYDINTEKPLQLFTDMHREPINVAKFS 586
F+++G K V L+D+ T + ++ +T H +N F
Sbjct: 88 FVSTGGDKTVFLWDVQTAQTVRRWTG-HSGRVNRGVFG 124
>gi|154312575|ref|XP_001555615.1| hypothetical protein BC1G_05890 [Botryotinia fuckeliana B05.10]
gi|347841905|emb|CCD56477.1| similar to pre-mRNA-processing factor 17 [Botryotinia fuckeliana]
Length = 525
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 14/117 (11%)
Query: 463 IVINHENGNVACYIPSI------GGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ + E G+ Y+P G T V+G+ + + L++GS V+++D +H
Sbjct: 209 VDLKKEAGSFKNYVPKKMIHTWKGHTKPVVGIRFFPESGHLLLSGSADTTVKIWDAHHSR 268
Query: 517 PKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFT 573
+ G++ LT V N+T QF++ Y + + L+D T + + FT
Sbjct: 269 ELLRTYSGHTKA--------LTDVAFNATGTQFISGSYDRMMKLWDTETGQCINRFT 317
>gi|389595005|ref|XP_003722725.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|323363953|emb|CBZ12959.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 303
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 316 PICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSL- 374
PI + +YR +++A++P LE LD+ I +R+ A +VF + P K+ + + +
Sbjct: 100 PITRDPNYRRFVVAAIPSLERLDDRDITDEERDNALAVFPQLLSFAPPPSKYAQPLEGIT 159
Query: 375 ---LQKREMGTSGNYQN-------SSKPKQPNIH 398
+Q+RE N + S+ PN+H
Sbjct: 160 PPTIQEREAQARANSTHVSHSGATGSEAGHPNMH 193
>gi|326429464|gb|EGD75034.1| hypothetical protein PTSG_07259 [Salpingoeca sp. ATCC 50818]
Length = 523
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVIN---HENGNVACYIPSIGGTNS--VLGLCWLKKY--P 495
Y+ S+ SL+A G L+GEV+V++ E + C P + ++S V + WL+ +
Sbjct: 211 LSYHTSDISLLAAGMLNGEVVVLDTSQDEGQELVCVSPFVADSHSEPVADIAWLRHHGDK 270
Query: 496 SKLVAGSDSGCVRLFDLNHI 515
S+LV S G + L+ NH+
Sbjct: 271 SELVTVSGDGSIILWLYNHM 290
>gi|68489058|ref|XP_711642.1| likely nucleolar ribosome biogenesis factor Rrb1p [Candida albicans
SC5314]
gi|68489197|ref|XP_711573.1| likely nucleolar ribosome biogenesis factor Rrb1p [Candida albicans
SC5314]
gi|46432886|gb|EAK92349.1| likely nucleolar ribosome biogenesis factor Rrb1p [Candida albicans
SC5314]
gi|46432960|gb|EAK92420.1| likely nucleolar ribosome biogenesis factor Rrb1p [Candida albicans
SC5314]
Length = 517
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGS 502
+++ ++ A G DG + + + + + I + V + W K L +G
Sbjct: 333 IQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVIASKSDVNVISWSSKINHLLASGH 392
Query: 503 DSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQFLA-SGYSKNVA 559
D G ++DL + + N S YDF + +TS+ N D+ +A S V
Sbjct: 393 DDGSWGVWDLRNF---TNNTTSNPSPVANYDFHKSPITSISFNPLDESIIAVSSEDNTVT 449
Query: 560 LYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLH 597
L+D+ E + + +E A+ H P LL +H
Sbjct: 450 LWDLAVEADDEEISQQRKE----AQELHDIPPQLLFVH 483
>gi|47218767|emb|CAG02753.1| unnamed protein product [Tetraodon nigroviridis]
Length = 452
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 479 IGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLT 538
+G ++ L LCWL + P L+AG + +FDL N+S T+ + + +
Sbjct: 182 LGQNDACLSLCWLLRDPKLLLAGMHRN-LAIFDLR-----------NTSQKTFVNTKAIQ 229
Query: 539 SVHVNSTDDQFLASGYSKNVALYDINT-EKPLQLFTDMHREPINVA 583
V V+ +AS Y VA++D+ EKP+ T+ + VA
Sbjct: 230 GVSVDPHFHDRVASFYEGQVAIWDLRKFEKPVLTLTEQPKPLTKVA 275
>gi|402225955|gb|EJU06015.1| WD40 repeat-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 518
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 23/127 (18%)
Query: 446 NPSNPSLMAFGTLDGEVIVINHENGN----VACYIPSIGGTNSVLGLCWLKKYPSKLVAG 501
+PSNPSL+ G+ DG + + + G +AC P VL +PS +A
Sbjct: 172 SPSNPSLILSGSYDGTMRLFDSRTGGAEIVMACKTP----VEDVL------LFPSGGIAL 221
Query: 502 SDSGCV-RLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVAL 560
S SG V R++DL VA R +++ + + +TS+ N + L+ G + V +
Sbjct: 222 SASGAVLRVWDL------VAGGRCLRALSNHQ--KTVTSLAFNGDASRVLSGGLDQMVKV 273
Query: 561 YDINTEK 567
YD+ K
Sbjct: 274 YDVTNYK 280
>gi|330796637|ref|XP_003286372.1| hypothetical protein DICPUDRAFT_30837 [Dictyostelium purpureum]
gi|325083644|gb|EGC37091.1| hypothetical protein DICPUDRAFT_30837 [Dictyostelium purpureum]
Length = 474
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 444 EYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSD 503
+++PS + A ++D V + + A + + +V+ W + LV+G D
Sbjct: 295 QWSPSEEKVFASCSVDQTVRIWDTRQHKPALTVKAHSADVNVI--SWSRNVEYLLVSGCD 352
Query: 504 SGCVRLFDLNHIPPKVADARGNSSVATY-YDFEQLTSVHVNSTDD-QFLASGYSKNVALY 561
G R++DL + NS V+ + Y +TS+ N ++ Q + S + ++
Sbjct: 353 DGSFRVWDLRQF-------KDNSPVSDFKYHTGPITSIEWNPYEESQVIVSSSDNQITIW 405
Query: 562 DINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLH 597
D + E+ + FTD + P + ++ P L +H
Sbjct: 406 DFSLEEDTEEFTDANDNPDDDFEY----PPQLFFIH 437
>gi|238878342|gb|EEQ41980.1| ribosome assembly protein RRB1 [Candida albicans WO-1]
Length = 517
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 10/160 (6%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+++ ++ A G DG + + + + + I + V + W K L +
Sbjct: 331 EDIQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVIASKSDVNVISWSSKINHLLAS 390
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ--LTSVHVNSTDDQFLASGYSKN- 557
G D G ++DL + + N S YDF + +TS+ N D+ +A N
Sbjct: 391 GHDDGSWGVWDLRNF---TNNTTSNPSPVANYDFHKSPITSISFNPLDESIIAVSSEDNT 447
Query: 558 VALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCLLLLH 597
V L+D+ E + + +E A+ H P LL +H
Sbjct: 448 VTLWDLAVEADDEEISQQRKE----AQELHDIPPQLLFVH 483
>gi|221487455|gb|EEE25687.1| WD-40 repeat-containing protein, putative [Toxoplasma gondii GT1]
Length = 1520
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHENG-NVACYIPSIGGTNSVLG--------LCWLKKYP 495
+NPS PSL+A G G V +++ EN +VA Y P G S G L W + P
Sbjct: 183 FNPSRPSLLAAGGSSGSVSILDVENVYDVAVYEPGGEGQGSNSGASGDECTSLAWNRVVP 242
Query: 496 SKLVAGSDSGCVRLFDLNH 514
L SG ++DL
Sbjct: 243 HVLATAFSSGTTSVWDLKQ 261
>gi|237830169|ref|XP_002364382.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211962046|gb|EEA97241.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|221507253|gb|EEE32857.1| WD-40 repeat-containing protein, putative [Toxoplasma gondii VEG]
Length = 1520
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHENG-NVACYIPSIGGTNSVLG--------LCWLKKYP 495
+NPS PSL+A G G V +++ EN +VA Y P G S G L W + P
Sbjct: 183 FNPSRPSLLAAGGSSGSVSILDVENVYDVAVYEPGGEGQGSNSGASGDECTSLAWNRVVP 242
Query: 496 SKLVAGSDSGCVRLFDLNH 514
L SG ++DL
Sbjct: 243 HVLATAFSSGTTSVWDLKQ 261
>gi|340905544|gb|EGS17912.1| putative ribosome assembly protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 501
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++PS S+ A + DG V V + + I V + W + L +
Sbjct: 311 EEIQWSPSEASVFASASTDGTVRVWDIRSKARKPAITMKISDVDVNVMSWSRLTTHLLAS 370
Query: 501 GSDSGCVRLFDLNHIPP------KVADARGNSSVATYYDF--EQLTSVHVNSTDDQFLAS 552
G D+G ++DL P A + G + ++F EQ+TSV + TDD +A
Sbjct: 371 GDDAGVWSVWDLRQWKPGAAGAAGAASSVGKPTPIASFNFHKEQITSVEWHPTDDSIVAV 430
Query: 553 GYSKN-VALYDINTE 566
N V L+D++ E
Sbjct: 431 SAGDNTVTLWDLSVE 445
>gi|159475539|ref|XP_001695876.1| hypothetical protein CHLREDRAFT_137847 [Chlamydomonas reinhardtii]
gi|158275436|gb|EDP01213.1| predicted protein [Chlamydomonas reinhardtii]
Length = 249
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 35/48 (72%)
Query: 308 KYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFA 355
+++S H +P+ + +YR Y+I+ LP+L+VLD + + +R+ AK++F+
Sbjct: 130 EHLSLHGNPVMTKPNYRLYVISKLPRLKVLDFKKVKQKERDAAKALFS 177
>gi|156035837|ref|XP_001586030.1| hypothetical protein SS1G_13123 [Sclerotinia sclerotiorum 1980]
gi|154698527|gb|EDN98265.1| hypothetical protein SS1G_13123 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 520
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 14/117 (11%)
Query: 463 IVINHENGNVACYIPSI------GGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIP 516
+ + E G++ Y+P G T V+G+ + L++GS V+++D H
Sbjct: 208 VDLKKEPGSIKNYVPKKMIHTWKGHTKPVIGIRFFPGSGHLLLSGSADTTVKIWDAYHSR 267
Query: 517 PKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLASGYSKNVALYDINTEKPLQLFT 573
+ G+S L+ V N+T QFL++ Y + + L+D T + + FT
Sbjct: 268 ELLRTYSGHSKA--------LSDVAFNATGTQFLSASYDRMMKLWDTETGQCINRFT 316
>gi|332376446|gb|AEE63363.1| unknown [Dendroctonus ponderosae]
Length = 247
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 315 SPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEHLPYKRKHKESVVSL 374
+PI ++HYR Y+I LPQL++LD I + +R+ AK +F +K KE +
Sbjct: 123 NPITAKQHYRLYLIYKLPQLKLLDFRKIRQKERDEAKQLFK--------SKKGKEIQKDI 174
Query: 375 LQK-REMGTSGNYQNSSKPK 393
L++ + GN N +K +
Sbjct: 175 LKRSKTFVPGGNMHNIAKSR 194
>gi|340502635|gb|EGR29307.1| hypothetical protein IMG5_158850 [Ichthyophthirius multifiliis]
Length = 446
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 63/155 (40%), Gaps = 17/155 (10%)
Query: 442 QFEYNPSNPSLMAFGTLDGEVIVIN--HENGNVACYIPSIGGTNSVLGLCWLKKYPSKLV 499
+ +YNP+ +L+A +D +I+ + E+G Y+ N +CW P V
Sbjct: 202 KIKYNPAQINLLAGTGIDRSIIIYDTRGESGVQKVYLQ-----NKCQSICWNPTEPINFV 256
Query: 500 AGSDSGCVRLFDLNHIPPKVADARGNSSVATYYD-FEQLTSVHVNSTDDQFLASGYSKNV 558
G D G FD+ + S+ + D + V + T +F++ Y K V
Sbjct: 257 VGCDDGNCYSFDMRKME---------SAKMIHKDHIGAVMDVDIAPTGRKFVSGSYDKTV 307
Query: 559 ALYDINTEKPLQLFTDMHREPINVAKFSHHSPLCL 593
++DI + +++ + + +S + L
Sbjct: 308 RIFDIEKGRSEEVYHGQRMQQVLAVAWSMDNEFIL 342
>gi|91079028|ref|XP_974924.1| PREDICTED: similar to GA11814-PA [Tribolium castaneum]
gi|270004178|gb|EFA00626.1| hypothetical protein TcasGA2_TC003502 [Tribolium castaneum]
Length = 441
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVIN-HENGNVACYIPSIGGTNS-VLGLCWLKKYPSKLVA 500
+++P+ S++A ++D + + + + AC + + S V + W K P +V+
Sbjct: 266 LQWSPNERSVIASCSVDKSIRIWDTRAQPSKACMLTAENAHESDVNVISWNKNEPF-IVS 324
Query: 501 GSDSGCVRLFDLNHIPPKVADARGNSSVATY-YDFEQLTSVHVNSTDDQFLASGYSKN-V 558
G D G + ++DL K + VAT+ + E +T+V + TD SG S N V
Sbjct: 325 GGDDGFLHIWDLRRFQQK-------TPVATFKHHTEPVTTVEWHPTDSAVFISGGSDNQV 377
Query: 559 ALYDINTEK 567
AL+D++ EK
Sbjct: 378 ALWDLSVEK 386
>gi|432911060|ref|XP_004078574.1| PREDICTED: WD repeat-containing protein mio-like [Oryzias latipes]
Length = 877
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 479 IGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLT 538
IG ++ L LCWL + P L+AG + +FDL N+S T+ + + +
Sbjct: 182 IGQNDACLSLCWLLRDPKLLLAGMHRN-LAIFDLR-----------NTSQKTFVNTKAIQ 229
Query: 539 SVHVNSTDDQFLASGYSKNVALYDINT-EKPLQLFTDMHREPINVA 583
V V+ +AS + VA++D+ EKP+ T+ + VA
Sbjct: 230 GVAVDPHFHDRVASFFEGQVAIWDLRKFEKPVLTLTEQPKPLTKVA 275
>gi|396497520|ref|XP_003844998.1| hypothetical protein LEMA_P003060.1 [Leptosphaeria maculans JN3]
gi|312221579|emb|CBY01519.1| hypothetical protein LEMA_P003060.1 [Leptosphaeria maculans JN3]
Length = 338
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 498 LVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFE--QLTSVHVNSTDDQFLASGYS 555
++ GS +RLF+ PP + T Y ++ S+ VN+ +D+F+++G
Sbjct: 32 ILTGSSDRTIRLFNPQKAPPTSPSQTPTPGLVTKYTAHGYEVLSLAVNTANDKFVSTGGD 91
Query: 556 KNVALYDINTEKPLQLFT 573
K V L+D+ T ++ +T
Sbjct: 92 KTVFLWDVQTAHTIRRWT 109
>gi|42562156|ref|NP_173317.2| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
gi|332191646|gb|AEE29767.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
Length = 969
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIV---INHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAG 501
Y + L+A G +DG + + I+ E+G +A V GL + K P++L +G
Sbjct: 75 YGSGSDGLIAGGLVDGNIGLWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASG 134
Query: 502 SDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLAS-GYSKNVAL 560
+D G V ++DL + +G S Y +++S+ N LAS ++ +
Sbjct: 135 ADDGTVCIWDLANPSKPSHYLKGTGS----YMQSEISSLSWNKGFQHVLASTSHNGTTVI 190
Query: 561 YDINTEKPLQLFTDM 575
+D+N EK + TD+
Sbjct: 191 WDVNNEK---IITDL 202
>gi|390013400|gb|AFL46502.1| transcription factor PEX7 [Capsicum annuum]
Length = 316
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 37/145 (25%)
Query: 434 GNKRVRPRQFEYNPSNP--SLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWL 491
GN RV Q NP+ P L AF T DG + +CW
Sbjct: 35 GNGRVHILQV--NPNGPISELAAFDTADG------------------------IYDVCWS 68
Query: 492 KKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDF-EQLTSVHVNST-DDQF 549
+ + S ++A S G V+L+DL+ +PP N+ + ++ + ++ SV N D F
Sbjct: 69 EAHDSLVIAASGDGSVKLYDLS-LPPT------NNPIRSFKEHTREVHSVDYNMVRKDSF 121
Query: 550 LASGYSKNVALYDINTEKPLQLFTD 574
L++ + V L+ ++ ++ F +
Sbjct: 122 LSASWDDTVKLWTVDRNASVRTFKE 146
>gi|320590661|gb|EFX03104.1| chromatin assembly factor 1 subunit [Grosmannia clavigera kw1407]
Length = 453
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 404 FSRSLSAAKLGSSAWPLLHPVSSFSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVI 463
++ AA G++A P + SFS + K + + + Y P NP ++A +DG V+
Sbjct: 118 YTGKAGAAGNGNTATPAI----SFSIVQKIDHPQ-EVNKARYQPQNPDIIATFAVDGRVL 172
Query: 464 VINHEN------GNVACYIPSIGGTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLN 513
+ + G V+ G GL W P L +GS+ V L+DL+
Sbjct: 173 IFDRTKHSLTPAGVVSPQFELAGHRQEGFGLAWNPHEPGCLASGSEDATVCLWDLH 228
>gi|241959578|ref|XP_002422508.1| WD repeat protein, putative [Candida dubliniensis CD36]
gi|334350838|sp|B9WN49.1|RTC1_CANDC RecName: Full=Restriction of telomere capping protein 1
gi|223645853|emb|CAX40516.1| WD repeat protein, putative [Candida dubliniensis CD36]
Length = 1098
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 481 GTNSVLGLCWLKKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQ-LTS 539
TN ++ + +K Y + AG +G V ++ +V+ + V Y D + + S
Sbjct: 131 ATNKLINVNTIKTYADTIAAGLSNGVVLIY-------RVSPNGQSKVVGKYSDHSRTINS 183
Query: 540 VHVNSTDDQFLASGYSKNVALYDI---NTEKPLQLFTDMHREPINVAKFSHHSP----LC 592
+ +++Q L+ + L+D+ +T+ + + ++H +PI ++S HS +C
Sbjct: 184 LDFIDSENQLLSGSQDGTIKLWDLRSSSTKPVMTIQANLHSDPIRACQYSRHSAVRNKIC 243
Query: 593 LLLLH 597
+L +H
Sbjct: 244 VLSVH 248
>gi|428178868|gb|EKX47741.1| hypothetical protein GUITHDRAFT_106293 [Guillardia theta CCMP2712]
Length = 1291
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 434 GNKRVRP-RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLK 492
G + VRP R A G G++++ N G+VA + G +VL + W+
Sbjct: 439 GRRTVRPNRPRNRMHKTEMFWALGYTRGDILIFNVPTGSVAHSL--CGHKAAVLSMMWIS 496
Query: 493 KYPSKLVAGSDSGCVRLFDLN 513
S LV+GS GCV L+DL+
Sbjct: 497 GE-SLLVSGSQDGCVMLWDLD 516
>gi|432950197|ref|XP_004084428.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Oryzias
latipes]
Length = 281
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 302 ANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVF-ARYFEH 360
A+VK +S +P+ +KHYR Y+I+ LP + VLD + +R+ A+ +F +
Sbjct: 110 ASVKTLTLLSLLRNPVTNKKHYRLYVISKLPHIRVLDFQKVKLKERQEAEKLFKGKRGAQ 169
Query: 361 LP--YKRKHKESVVSLLQKREMGTSGNYQNSSKPKQPNIHRTQHFFSRSLSAAKL 413
L ++ K + + Q++E SG P Q + +H S + S A++
Sbjct: 170 LAKDIAKRTKTFIPGVAQQQEKKRSG-------PSQAEVEAIKHAISNASSLAEV 217
>gi|296005602|ref|XP_002809115.1| U2 small nuclear ribonucleoprotein A, putative [Plasmodium
falciparum 3D7]
gi|225632065|emb|CAX64396.1| U2 small nuclear ribonucleoprotein A, putative [Plasmodium
falciparum 3D7]
Length = 175
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 310 ISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVFARYFEH 360
+S + +C +HYREY+I ++P L LD I DRE+A S + E+
Sbjct: 117 LSLLENSVCKLEHYREYLIYNIPSLRYLDFEKIKTKDRELANSTMENFNEN 167
>gi|307110336|gb|EFN58572.1| hypothetical protein CHLNCDRAFT_140727 [Chlorella variabilis]
Length = 428
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 18/89 (20%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPS---KLVAG 501
++P NP+L+ GT GE++ +N G++ + +G C L PS +L+A
Sbjct: 187 FHPVNPNLLLLGTAAGELLTLNASTGHLVAKAELQAAPMARVGACSLA--PSDRGQLLAA 244
Query: 502 SDSGCVRLFD-------------LNHIPP 517
GC+ LFD L H+PP
Sbjct: 245 DSRGCLHLFDASLHGGAAPRMALLAHLPP 273
>gi|359485383|ref|XP_002274192.2| PREDICTED: protein SPA1-RELATED 3 [Vitis vinifera]
Length = 906
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 26/151 (17%)
Query: 432 KEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWL 491
KE KRV F ++P+ +A G DG V + N G SIG + +C +
Sbjct: 685 KEHEKRVWSVDFSL--ADPTKLASGGDDGAVKLWNINQGG------SIGTIKTKANVCCV 736
Query: 492 KKYPSK---LVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQ 548
+ P L GS V +DL + +A G+S +Y F T++ STD
Sbjct: 737 QFPPDSARSLAIGSADHKVYCYDLRNTRIPLATLNGHSKTVSYVKFINSTTLVSASTDS- 795
Query: 549 FLASGYSKNVALYDINT------EKPLQLFT 573
++ L+D++T + PLQ FT
Sbjct: 796 --------SLKLWDLSTCTSRVLDSPLQTFT 818
>gi|423394144|ref|ZP_17371368.1| hypothetical protein ICG_05990 [Bacillus cereus BAG1X1-3]
gi|401627429|gb|EJS45299.1| hypothetical protein ICG_05990 [Bacillus cereus BAG1X1-3]
Length = 345
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 440 PRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWL--KKYPSK 497
P Q+E NP NP+ A+ +L E + E G++ + S+G S+ G K P
Sbjct: 142 PHQYE-NPDNPN--AYESLANEAL---KELGHIDILVASVGSGGSLCGTARALRKANPDL 195
Query: 498 LVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVH 541
V D+ +F+ IP ++ GNS V DF + VH
Sbjct: 196 RVVAVDAVGSVIFNQPDIPGRLQGGHGNSVVPKNVDFSIIDEVH 239
>gi|449464024|ref|XP_004149729.1| PREDICTED: protein transport protein Sec31A-like [Cucumis sativus]
Length = 1112
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLG-----LCWLKKYP 495
R E+N P+L+A G DGE+ + + N + + P + G+ S L W K
Sbjct: 126 RGLEFNTITPNLLASGADDGEICIWDLANPSQPIHFPPLKGSGSAAQGEISFLSWNSKVQ 185
Query: 496 SKLVAGSDSGCVRLFDLNHIPPKV--ADARGNSSVATYYDFEQLTSVHVNSTDDQFLASG 553
L + S +G ++DL P + +D+ ++ + T + V S DD
Sbjct: 186 HILASTSYNGATVVWDLKKQKPVISFSDSTRRRCSVLQWNPDLATQLVVASDDD------ 239
Query: 554 YSKNVALYDI-NTEKPLQLFTDMHR 577
+S ++ L+D+ N P++ F R
Sbjct: 240 HSPSLRLWDMRNIMTPVKEFVGHTR 264
>gi|367026526|ref|XP_003662547.1| hypothetical protein MYCTH_2303296 [Myceliophthora thermophila ATCC
42464]
gi|347009816|gb|AEO57302.1| hypothetical protein MYCTH_2303296 [Myceliophthora thermophila ATCC
42464]
Length = 497
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 441 RQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVA 500
+ +++PS S+ A + DG + V + + + V + W ++ L +
Sbjct: 309 EEIQWSPSEASVFASASSDGTIRVWDVRSKGRKPALSMQVSDVDVNVMSWSRQTTHLLAS 368
Query: 501 GSDSGCVRLFDLNHIPPKVADA-----RGNSSVATY-YDFEQLTSVHVNSTDDQFLASGY 554
G D+G ++DL P A + S +A++ + EQ+TSV + TDD +A
Sbjct: 369 GDDAGVWAVWDLRQWKPSAGAAAASSLQRPSPIASFNFHKEQITSVEWHPTDDSIVAVSA 428
Query: 555 SKN-VALYDINTE 566
N V L+D+ E
Sbjct: 429 GDNTVTLWDLAVE 441
>gi|164661285|ref|XP_001731765.1| hypothetical protein MGL_1033 [Malassezia globosa CBS 7966]
gi|159105666|gb|EDP44551.1| hypothetical protein MGL_1033 [Malassezia globosa CBS 7966]
Length = 244
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 315 SPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVF 354
+PI +KHYRE+++ +P L VLD I +R +A+ F
Sbjct: 122 NPIARDKHYREFIVWCMPHLRVLDYRRITERERAVARKAF 161
>gi|46124841|ref|XP_386974.1| hypothetical protein FG06798.1 [Gibberella zeae PH-1]
gi|90101343|sp|Q4I7L0.1|HAT2_GIBZE RecName: Full=Histone acetyltransferase type B subunit 2
Length = 423
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 16/162 (9%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINH--------ENGNVACYIPSIGGTNSVLGLCWLKKYPS 496
Y P NP ++A +DG++++ + G V I +G GL W
Sbjct: 131 YQPQNPDILATLCVDGKILIFDRTKHPLDPTSTGKVNAQIELVGHEAEGFGLNWNPHEEG 190
Query: 497 KLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTS-VHVNSTDDQFLAS-GY 554
L +GS+ +RL+DL + AD+R + TY Q+ + V + F+ S
Sbjct: 191 CLASGSEDTTMRLWDLKTLK---ADSRILNPSRTYRHHTQIVNDVQYHPISKNFIGSVSD 247
Query: 555 SKNVALYDI---NTEKPLQLFTDMHREPINVAKFSHHSPLCL 593
+ + + DI T K + H + IN F+ +S + +
Sbjct: 248 DQTLQIVDIRHSETNKAAVVAKRGHLDAINALAFNPNSEVLV 289
>gi|198423802|ref|XP_002129763.1| PREDICTED: similar to WD repeat domain 57 (U5 snRNP specific)
[Ciona intestinalis]
Length = 351
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 418 WPLLHPVSSFSHIYKEGNK-RVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYI 476
W + +F H+ K G+K V QF + SN + + D V + + E G I
Sbjct: 86 WNVYGECDNF-HVIKGGHKGAVLDLQFNTDGSN---IITASTDKTVGLFDSETGE---RI 138
Query: 477 PSIGGTNSVLGLCWLKKYPSKLVA-GSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFE 535
+ G N ++ C + LVA GSD V+++D R ++ +
Sbjct: 139 KRMKGHNGIVNTCTTARRGDPLVASGSDDCTVKIWD----------TRRKGAIKSIQLTY 188
Query: 536 QLTSVHVNSTDDQFLASGYSKNVALYDINTEK 567
Q+T+V N T + + G + ++DI +EK
Sbjct: 189 QITAVSFNDTSESVITGGIDNVIKVWDIRSEK 220
>gi|6730704|gb|AAF27099.1|AC011809_8 Similar to WEB1/SEC31-like protein transport protein [Arabidopsis
thaliana]
Length = 874
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 445 YNPSNPSLMAFGTLDGEVIV---INHENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAG 501
Y + L+A G +DG + + I+ E+G +A V GL + K P++L +G
Sbjct: 75 YGSGSDGLIAGGLVDGNIGLWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASG 134
Query: 502 SDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVHVNSTDDQFLAS-GYSKNVAL 560
+D G V ++DL + +G S Y +++S+ N LAS ++ +
Sbjct: 135 ADDGTVCIWDLANPSKPSHYLKGTGS----YMQSEISSLSWNKGFQHVLASTSHNGTTVI 190
Query: 561 YDINTEKPLQLFTDM 575
+D+N EK + TD+
Sbjct: 191 WDVNNEK---IITDL 202
>gi|408388370|gb|EKJ68056.1| hypothetical protein FPSE_11867 [Fusarium pseudograminearum CS3096]
Length = 433
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 16/162 (9%)
Query: 445 YNPSNPSLMAFGTLDGEVIVINH--------ENGNVACYIPSIGGTNSVLGLCWLKKYPS 496
Y P NP ++A +DG++++ + G V I +G GL W
Sbjct: 141 YQPQNPDILATLCVDGKILIFDRTKHPLDPTSTGKVNAQIELVGHEAEGFGLNWNPHEEG 200
Query: 497 KLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTS-VHVNSTDDQFLAS-GY 554
L +GS+ +RL+DL + AD+R + TY Q+ + V + F+ S
Sbjct: 201 CLASGSEDTTMRLWDLKTLK---ADSRILNPSRTYRHHTQIVNDVQYHPISKNFIGSVSD 257
Query: 555 SKNVALYDI---NTEKPLQLFTDMHREPINVAKFSHHSPLCL 593
+ + + DI T K + H + IN F+ +S + +
Sbjct: 258 DQTLQIVDIRHSETNKAAVVAKRGHLDAINALAFNPNSEVLV 299
>gi|170084289|ref|XP_001873368.1| glutamate-rich WD repeat containing [Laccaria bicolor S238N-H82]
gi|164650920|gb|EDR15160.1| glutamate-rich WD repeat containing [Laccaria bicolor S238N-H82]
Length = 508
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 443 FEYNPSNPSLMAFGTLDGEVIVIN-HENGNVACYIPSIGGTNSVLGLCWLKKYPSKLVAG 501
+++PS P++ A + D V + + G + + + V + W + L++G
Sbjct: 321 IQWSPSEPTVFASCSADRSVQIWDVRSKGRKSVAGIASAHESDVNVISWNRLTTYLLLSG 380
Query: 502 SDSGCVRLFDLNHIPPKVADARGNSSVATY-YDFEQLTSVHVNSTDDQ-FLASGYSKNVA 559
D G ++++DL ++ + S VA++ + +TS+ + T+D F ASG V
Sbjct: 381 GDEGGIKVWDLRNVKKTGSVDPDPSPVASFAWHKAPITSIEWHPTEDSIFAASGADDQVT 440
Query: 560 LYDINTEK 567
L+D+ E+
Sbjct: 441 LWDLAVEQ 448
>gi|410930978|ref|XP_003978874.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Takifugu
rubripes]
Length = 282
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 302 ANVKLKKYISHHPSPICFEKHYREYMIASLPQLEVLDNLPIGRLDREIAKSVF 354
A +K +S +P+ +KHYR Y+I LPQL VLD + +R+ A+ +F
Sbjct: 110 ATIKTLSLLSLLRNPVTNKKHYRLYVINKLPQLRVLDFQKVKLKERQEAEKMF 162
>gi|407702469|ref|YP_006815619.1| pyridoxal-phosphate dependent protein [Bacillus thuringiensis MC28]
gi|407386884|gb|AFU17380.1| pyridoxal-phosphate dependent enzyme [Bacillus thuringiensis MC28]
Length = 346
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 8/117 (6%)
Query: 427 FSHIYKEGNKRVRPRQFEYNPSNPSLMAFGTLDGEVIVINHENGNVACYIPSIGGTNSVL 486
I KE + PRQ+E N NP+ A+ L E + E G++ + S+G S+
Sbjct: 130 LDEILKENKEAFCPRQYE-NFDNPN--AYVALANEAL---EELGHIDILVASVGSGGSLC 183
Query: 487 GLCWL--KKYPSKLVAGSDSGCVRLFDLNHIPPKVADARGNSSVATYYDFEQLTSVH 541
G K P V D+ +F+ IP ++ GNS + DF + VH
Sbjct: 184 GTARALRKANPDLRVVAVDAVGSVIFNQPDIPGRLQGGHGNSVIPKNVDFSIIDEVH 240
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,296,249,402
Number of Sequences: 23463169
Number of extensions: 390514350
Number of successful extensions: 819323
Number of sequences better than 100.0: 381
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 818810
Number of HSP's gapped (non-prelim): 500
length of query: 606
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 457
effective length of database: 8,863,183,186
effective search space: 4050474716002
effective search space used: 4050474716002
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)