BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035503
(788 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/830 (55%), Positives = 608/830 (73%), Gaps = 64/830 (7%)
Query: 1 MASFTFTTPPNPKFSHTKPQKPLKLSQTHLTKLRESDNSYESLYKSYFHQISSLSKEKQI 60
MAS F T PN K + KP S H + S +S SYFH++SSL K +I
Sbjct: 1 MASLPFNTIPN-KVPFSVSSKP---SSKHHDEQAHSPSS-----TSYFHRVSSLCKNGEI 51
Query: 61 REAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVET 120
+EA+ L+TEM RN +IGPEIYGE+LQGCVY+RD+ TG+QIHARILKNGDF+ARNEY+ET
Sbjct: 52 KEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIET 111
Query: 121 KLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSP 180
KLV+FYAKCDAL++A LF +LRV+NVFSWAAIIG+ CR+GL E AL+GFVEM E+ + P
Sbjct: 112 KLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFP 171
Query: 181 DNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVF 240
DNFV+PNV KACGAL W FGR VHGYV+K G + CVFVASSL DMYGKCG L++A KVF
Sbjct: 172 DNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVF 231
Query: 241 DGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALD 300
D + RN VAWN+++VGYVQNG NEEAIR+F +M +GVEPTRV+V++ LSASAN+ ++
Sbjct: 232 DEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVE 291
Query: 301 EGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYV 360
EGKQ+HA+A++NGMELDN+LG+S++NFY KVGL+E AE+VF RM E+D+VTWNL+I+ YV
Sbjct: 292 EGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYV 351
Query: 361 QSG----------------------------------------------------QSDVV 368
Q G +SD+V
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 369 VASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEG 428
+AS+++DMYAKC I +AK+VF+S + +D++LWNTLLAAYA+ G SGEA RLFY MQLEG
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 429 ISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAI 488
+ PN+I+WN +IL LRNGQ++EAKDMFLQMQS G+ PNLI+WTT+++G+ QN C EAI
Sbjct: 472 VPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI 531
Query: 489 LFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRH-DLCLPTPIVTSLVDM 547
LF ++M E+G++P+ +IT ALSAC +ASL GR IHGY+IR+ I TSLVDM
Sbjct: 532 LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDM 591
Query: 548 YAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITF 607
YAKCG+I++A++VF ELP+ NAMIS YA++G EA+AL+++L+ G+ PD+IT
Sbjct: 592 YAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITI 651
Query: 608 TNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMP 667
TN+L+AC+HAG +N+ +E+F + S +KP +EH+G +V+LL+ G ++ALR+I MP
Sbjct: 652 TNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP 711
Query: 668 CDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQ 727
PDA +I SL+++C K +TEL +Y+S LL+ EP+N GNYV +SNAYA G W+EV +
Sbjct: 712 FKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVK 771
Query: 728 VRDIMKEKGLRKNPGCSWIQI-GEE-LHVFVACDRSHPKTEEIYATLALL 775
+R++MK KGL+K PGCSWIQI GEE +HVFVA D++H + EI LALL
Sbjct: 772 MREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALL 821
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 257/797 (32%), Positives = 411/797 (51%), Gaps = 94/797 (11%)
Query: 75 FQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVE-TKLVVFYAKCDALD 133
F + E G LLQ ++D+ G++IH L +G RN+ V T+++ YA C + D
Sbjct: 80 FLLVREALGLLLQASGKRKDIEMGRKIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPD 137
Query: 134 VASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEM-QEDGVSPDNFVLPNVLKAC 192
+ +F LR KN+F W A+I R L ++ L F+EM + PD+F P V+KAC
Sbjct: 138 DSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC 197
Query: 193 GALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWN 252
+ VG G AVHG V+K G VFV ++L+ YG G + +A ++FD M RN+V+WN
Sbjct: 198 AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWN 257
Query: 253 SMIVGYVQNGLNEEAIRVFYEMTLEGVE----PTRVSVTSILSASANLDALDEGKQAHAV 308
SMI + NG +EE+ + EM E + P ++ ++L A + GK H
Sbjct: 258 SMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGW 317
Query: 309 AVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASY--------- 359
AV ++ + VL +++++ YSK G + +A+++F +++V+WN ++ +
Sbjct: 318 AVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGT 377
Query: 360 ------VQSGQSDV---------------------------------------VVASSIV 374
+ +G DV +VA++ V
Sbjct: 378 FDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFV 437
Query: 375 DMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNII 434
YAKC + A++VF+ I + V WN L+ +A + QM++ G+ P+
Sbjct: 438 ASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSF 497
Query: 435 SWNSVI-----LGFLRNGQMNEA--------KDMFLQMQSLGV----------------- 464
+ S++ L LR G+ +D+F+ + L +
Sbjct: 498 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 557
Query: 465 -QPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGR 523
+L++W T+I+G QN + A+ F++M+ GI+ ++ AC+ + SLR GR
Sbjct: 558 EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGR 617
Query: 524 AIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHG 583
H Y ++H L I SL+DMYAK G+I Q+ +VF+ K +NAMI GY +HG
Sbjct: 618 EAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHG 677
Query: 584 LAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHF 643
LA EA+ LF+ +Q+ G +PD +TF +L AC+H+GL++EGL M S +KP+++H+
Sbjct: 678 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY 737
Query: 644 GCVVNLLSRCGNLDEALRVIL-TMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLE 702
CV+++L R G LD+ALRV+ M + D I SLLS+C E+ E ++ L +LE
Sbjct: 738 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELE 797
Query: 703 PDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSH 762
P+ P NYV LSN YA G+W +V +VR M E LRK+ GCSWI++ ++ FV +R
Sbjct: 798 PEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFL 857
Query: 763 PKTEEIYATLALLGMHV 779
EEI + ++L M +
Sbjct: 858 DGFEEIKSLWSILEMKI 874
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/534 (24%), Positives = 235/534 (44%), Gaps = 75/534 (14%)
Query: 158 CRVGLSEKALIGFVE-MQEDGVSPDNFVLPN-----VLKACGALGWVGFGRAVHGYV--- 208
C G +K+ E + +D S D F+L +L+A G + GR +H V
Sbjct: 54 CETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGS 113
Query: 209 LKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAI 268
++ D + + +I MY CG +++R VFD + ++N+ WN++I Y +N L +E +
Sbjct: 114 TRLRNDDVL--CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVL 171
Query: 269 RVFYEM-TLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINF 327
F EM + + P + ++ A A + + G H + V G+ D +G+++++F
Sbjct: 172 ETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSF 231
Query: 328 YSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQS---------------------D 366
Y G + DA +F M ER++V+WN +I + +G S D
Sbjct: 232 YGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPD 291
Query: 367 VVVASSIVDMYAKCERIDNAKQVFN-SIILR---DVVLWNTLLAAYADLGRSGEASRLFY 422
V +++ + A+ I K V ++ LR ++VL N L+ Y+ G A +F
Sbjct: 292 VATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK 351
Query: 423 QMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNS 482
+ N++SWN+++ GF G + D+ QM + G
Sbjct: 352 MNN----NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG------------------- 388
Query: 483 CGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVT 542
+K TI A+ C + L + + +H Y ++ + +
Sbjct: 389 --------------EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN 434
Query: 543 SLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDP 602
+ V YAKCG++ A+RVF SK + +NA+I G+A +L ++ G+ P
Sbjct: 435 AFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLP 494
Query: 603 DSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNL 656
DS T ++L+ACS + G E+ G + ++ + + V++L CG L
Sbjct: 495 DSFTVCSLLSACSKLKSLRLGKEVH-GFIIRNWLERDLFVYLSVLSLYIHCGEL 547
>sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein At1g19720
OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1
Length = 894
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/742 (31%), Positives = 395/742 (53%), Gaps = 25/742 (3%)
Query: 50 QISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNG 109
Q L + + EA L + + ++ Y +LL+ C+ ++ G+ +HAR G
Sbjct: 52 QFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF---G 108
Query: 110 DFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIG 169
F + +VETKL+ YAKC + A ++F +R +N+F+W+A+IG R +
Sbjct: 109 LFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKL 168
Query: 170 FVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGK 229
F M +DGV PD+F+ P +L+ C G V G+ +H V+K+G C+ V++S++ +Y K
Sbjct: 169 FRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAK 228
Query: 230 CGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSI 289
CG+L+ A K F M R+V+AWNS+++ Y QNG +EEA+ + EM EG+ P V+ +
Sbjct: 229 CGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNIL 288
Query: 290 LSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDI 349
+ L D G+ D +++I+ G+ A +F +M +
Sbjct: 289 IGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 350 VTWNLLIASYVQSGQ---------------------SDVVVASSIVDMYAKCERIDNAKQ 388
V + I S V + DV+V +S+VDMY+KC ++++A++
Sbjct: 349 VPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARK 408
Query: 389 VFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQ 448
VF+S+ +DV WN+++ Y G G+A LF +MQ + PNII+WN++I G+++NG
Sbjct: 409 VFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGD 468
Query: 449 MNEAKDMFLQMQSLG-VQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTIT 507
EA D+F +M+ G VQ N TW +I+G QN +EA+ F++M + P++ TI
Sbjct: 469 EGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTIL 528
Query: 508 CALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSK 567
L AC ++ + R IHG ++R +L + +L D YAK G+I ++ +F +K
Sbjct: 529 SLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK 588
Query: 568 ELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELF 627
++ +N++I GY +HG ALALF ++ +GI P+ T ++I+ A G V+EG ++F
Sbjct: 589 DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF 648
Query: 628 VGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNE 687
+ +D+ + P++EH +V L R L+EAL+ I M + I S L+ C +
Sbjct: 649 YSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGD 708
Query: 688 TELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQ 747
++A + +E+L LEP+N +S YA + + ++ L+K G SWI+
Sbjct: 709 IDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIE 768
Query: 748 IGEELHVFVACDRSHPKTEEIY 769
+ +H F D+S T+ +Y
Sbjct: 769 VRNLIHTFTTGDQSKLCTDVLY 790
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 246/778 (31%), Positives = 402/778 (51%), Gaps = 85/778 (10%)
Query: 80 EIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLF 139
E + +L+ C +R + G+Q+H+RI K F + ++ KLV Y KC +LD A ++F
Sbjct: 81 EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVF 139
Query: 140 CRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVG 199
+ + F+W +IG G AL + M+ +GV P +LKAC L +
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199
Query: 200 FGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIAR-NVVAWNSMIVGY 258
G +H ++K+G+ F+ ++L+ MY K DL AR++FDG + + V WNS++ Y
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 259 VQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDN 318
+G + E + +F EM + G P ++ S L+A GK+ HA + +
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 319 V-LGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQ---------------- 361
+ + +++I Y++ G + AE + +M D+VTWN LI YVQ
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 362 ----------------SGQ--------------------SDVVVASSIVDMYAKCERIDN 385
SG+ S++ V ++++DMY+KC
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439
Query: 386 AKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFY-----QMQL-EGISPNIISWNSV 439
+ F + +D++ W T++A YA EA LF +M++ E I +I+ +SV
Sbjct: 440 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV 499
Query: 440 ILGFL----------RNGQM-----NEAKDMFLQMQSLGVQ---------PNLITWTTLI 475
+ L R G + NE D++ + +++G ++++WT++I
Sbjct: 500 LKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMI 559
Query: 476 SGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLC 535
S N +EA+ F+ M+ETG+ + + C LSA +++L GR IH YL+R C
Sbjct: 560 SSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFC 619
Query: 536 LPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNL 595
L I ++VDMYA CG++ AK VFD K L Y +MI+ Y MHG A+ LF +
Sbjct: 620 LEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM 679
Query: 596 QQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGN 655
+ + + PD I+F +L ACSHAGL++EG M +++++P EH+ C+V++L R
Sbjct: 680 RHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANC 739
Query: 656 LDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNA 715
+ EA + M +P A + +LL+ C +E E+ E ++ LL+LEP NPGN V +SN
Sbjct: 740 VVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNV 799
Query: 716 YAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEIYATLA 773
+A GRWN+V +VR MK G+ K+PGCSWI++ ++H F A D+SHP+++EIY L+
Sbjct: 800 FAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLS 857
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 160/615 (26%), Positives = 272/615 (44%), Gaps = 106/615 (17%)
Query: 63 AVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKL 122
A+ L M+ +G + LL+ C RD+ +G ++H+ ++K G + ++ L
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG--YHSTGFIVNAL 223
Query: 123 VVFYAKCDALDVASRLFCRLRVK-NVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPD 181
V YAK D L A RLF + K + W +I+ G S + L F EM G +P+
Sbjct: 224 VSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPN 283
Query: 182 NFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGC-VFVASSLIDMYGKCGDLEEARKVF 240
++ + + L AC + G+ +H VLK ++V ++LI MY +CG + +A ++
Sbjct: 284 SYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL 343
Query: 241 DGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALD 300
M +VV WNS+I GYVQN + +EA+ F +M G + VS+TSI++AS L L
Sbjct: 344 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 301 EGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYV 360
G + HA + +G + + +G+++I+ YSK L F RM ++D+++W +IA Y
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYA 463
Query: 361 QS---------------------------------------------------GQSDVVV 369
Q+ G D V+
Sbjct: 464 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVI 523
Query: 370 ASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGI 429
+ +VD+Y KC + A +VF SI +DVV W +++++ A G EA LF +M G+
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 583
Query: 430 SPNIISW----------------NSVILGFLRN-------------------GQMNEAKD 454
S + ++ + LR G + AK
Sbjct: 584 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKA 643
Query: 455 MFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACT 514
+F +++ G L+ +T++I+ + CG A+ F +M + P + L AC+
Sbjct: 644 VFDRIERKG----LLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 699
Query: 515 DVASLRNGRAIHGYL--IRHDLCL-PTP-IVTSLVDMYAKCGNIHQA---KRVFDISPSK 567
L GR G+L + H+ L P P LVDM + + +A ++ P+
Sbjct: 700 HAGLLDEGR---GFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTA 756
Query: 568 ELPVYNAMISGYAMH 582
E V+ A+++ H
Sbjct: 757 E--VWCALLAACRSH 769
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 134/244 (54%), Gaps = 7/244 (2%)
Query: 62 EAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETK 121
EA++L ++ + +I I G +L+ + M ++IH IL+ G + ++ +
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL---DTVIQNE 526
Query: 122 LVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPD 181
LV Y KC + A+R+F ++ K+V SW ++I + G +A+ F M E G+S D
Sbjct: 527 LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586
Query: 182 NFVLPNVLKACGALGWVGFGRAVHGYVLKVGF--DGCVFVASSLIDMYGKCGDLEEARKV 239
+ L +L A +L + GR +H Y+L+ GF +G + VA ++DMY CGDL+ A+ V
Sbjct: 587 SVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA--VVDMYACCGDLQSAKAV 644
Query: 240 FDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDAL 299
FD + + ++ + SMI Y +G + A+ +F +M E V P +S ++L A ++ L
Sbjct: 645 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 704
Query: 300 DEGK 303
DEG+
Sbjct: 705 DEGR 708
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 43/280 (15%)
Query: 510 LSACTDVASLRNGRAIHGYLIRHDLCLPTP----IVTSLVDMYAKCGNIHQAKRVFDISP 565
L C ++ GR +H + + P+ + LV MY KCG++ A++VFD P
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFK---TFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMP 143
Query: 566 SKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLE 625
+ +N MI Y +G ALAL+ N++ +G+ +F +L AC+ + G E
Sbjct: 144 DRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSE 203
Query: 626 LFVGMFSDHQVKPSMEHFGCVVNLL----SRCGNLDEALRVILTMPCDPDAHIIGSLLST 681
L + VK G +VN L ++ +L A R+ DA + S+LS+
Sbjct: 204 LHSLL-----VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 258
Query: 682 CVKSNET-ELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKN 740
S ++ E E E + + P +Y +S L
Sbjct: 259 YSTSGKSLETLELFRE--MHMTGPAPNSYTIVS----------------------ALTAC 294
Query: 741 PGCSWIQIGEELHVFVACDRSHPKTEEIYATLALLGMHVR 780
G S+ ++G+E+H V +H + E+Y AL+ M+ R
Sbjct: 295 DGFSYAKLGKEIHASVLKSSTH--SSELYVCNALIAMYTR 332
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 252/833 (30%), Positives = 413/833 (49%), Gaps = 103/833 (12%)
Query: 39 SYESLYKSYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTG 98
S S+ K + I+ K +R + L E R + LLQ C + G
Sbjct: 2 SISSVAKRFAPAIAPYKKSLPLRNSSRFLEETIPRRLSL-------LLQACSNPNLLRQG 54
Query: 99 QQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRL--RVKNVFSWAAIIGL 156
+Q+HA ++ N + + Y + +++ YA C + ++F RL R ++ W +II
Sbjct: 55 KQVHAFLIVNS--ISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISS 112
Query: 157 NCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGC 216
R GL +AL + +M GVSPD P ++KAC AL + V +G D
Sbjct: 113 FVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCN 172
Query: 217 VFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTL 276
FVASSLI Y + G ++ K+FD ++ ++ V WN M+ GY + G + I+ F M +
Sbjct: 173 EFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM 232
Query: 277 EGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLED 336
+ + P V+ +LS A+ +D G Q H + V++G++ + + +S+++ YSK G +D
Sbjct: 233 DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD 292
Query: 337 AEVVFSRMVERDIVTWNLLIASY----------------VQSG----------------- 363
A +F M D VTWN +I+ Y + SG
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 364 -------------------QSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTL 404
D+ + S+++D Y KC + A+ +F+ DVV++ +
Sbjct: 353 FENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 412
Query: 405 LAAYADLGRSGEASRLFYQMQLEGISPNIISWNSV--ILGFL------------------ 444
++ Y G ++ +F + ISPN I+ S+ ++G L
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF 472
Query: 445 ---------------RNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAIL 489
+ G+MN A ++F ++ + ++++W ++I+ Q+ + AI
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLS----KRDIVSWNSMITRCAQSDNPSAAID 528
Query: 490 FFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYA 549
F++M +GI +I+ ALSAC ++ S G+AIHG++I+H L ++L+DMYA
Sbjct: 529 IFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYA 588
Query: 550 KCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQK-GIDPDSITFT 608
KCGN+ A VF K + +N++I+ HG ++L LF + +K GI PD ITF
Sbjct: 589 KCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFL 648
Query: 609 NILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPC 668
I+++C H G V+EG+ F M D+ ++P EH+ CVV+L R G L EA + +MP
Sbjct: 649 EIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPF 708
Query: 669 DPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQV 728
PDA + G+LL C ELAE S L+ L+P N G YV +SNA+A + W V++V
Sbjct: 709 PPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKV 768
Query: 729 RDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEIYATLALLGMHVRL 781
R +MKE+ ++K PG SWI+I + H+FV+ D +HP++ IY+ L L +RL
Sbjct: 769 RSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRL 821
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 256/822 (31%), Positives = 433/822 (52%), Gaps = 76/822 (9%)
Query: 3 SFTFTTP---PNPK----FSHTKPQKPLKLSQTHLTK-LRESDNSYESLYKS-------Y 47
+FTF+ P P P FS K L+ + T T+ + + + S++ S +
Sbjct: 6 AFTFSLPSIFPFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWW 65
Query: 48 FHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYG--ELLQGCVYKRDMYTGQQIHARI 105
+ S + +REAV LT + I P+ Y LL+ +DM G+QIHA +
Sbjct: 66 IDLLRSKVRSNLLREAV--LTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 106 LKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEK 165
K G + + V LV Y KC ++F R+ +N SW ++I C E
Sbjct: 124 YKFG-YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 182
Query: 166 ALIGFVEMQEDGVSPDNFVLPNVLKACGALGW---VGFGRAVHGYVLKVGFDGCVFVASS 222
AL F M ++ V P +F L +V+ AC L + G+ VH Y L+ G + F+ ++
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINT 241
Query: 223 LIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPT 282
L+ MYGK G L ++ + R++V WN+++ QN EA+ EM LEGVEP
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 283 RVSVTSILSASANLDALDEGKQAHAVAVING-MELDNVLGSSIINFYSKVGLLEDAEVVF 341
+++S+L A ++L+ L GK+ HA A+ NG ++ ++ +GS++++ Y + VF
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 342 SRMVERDIVTWNLLIASYVQSGQSDVVV---------------ASSIVDMYAKCERID-- 384
M +R I WN +IA Y Q+ + ++++ + C R
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 385 NAKQVFNSIIL-----RDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSV 439
+ K+ + ++ RD + NTL+ Y+ LG+ A R+F +M+ ++++WN++
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME----DRDLVTWNTM 477
Query: 440 ILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGI 499
I G++ + +A + +MQ+L + + G ++ S +
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERK--------VSKGASRVS----------------L 513
Query: 500 KPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKR 559
KP++ T+ L +C +++L G+ IH Y I+++L + ++LVDMYAKCG + +++
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 560 VFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGL 619
VFD P K + +N +I Y MHG EA+ L + + +G+ P+ +TF ++ ACSH+G+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633
Query: 620 VNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPD-AHIIGSL 678
V+EGL +F M D+ V+PS +H+ CVV+LL R G + EA +++ MP D + A SL
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 679 LSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLR 738
L N E+ E +++L+QLEP+ +YV L+N Y+++G W++ ++VR MKE+G+R
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753
Query: 739 KNPGCSWIQIGEELHVFVACDRSHPKTEEIYATLALLGMHVR 780
K PGCSWI+ G+E+H FVA D SHP++E++ L L +R
Sbjct: 754 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMR 795
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/680 (33%), Positives = 363/680 (53%), Gaps = 92/680 (13%)
Query: 181 DNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVF 240
D L +VL+ C + G+ V ++ GF + S L MY CGDL+EA +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 241 DGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALD 300
D + + WN ++ ++G +I +F +M GVE + + + + ++L ++
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 301 EGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYV 360
G+Q H + +G N +G+S++ FY K ++ A VF M ERD+++WN +I YV
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 361 Q------------------------------SGQSDVVVAS------------------- 371
+G +D + S
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 372 ---SIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEG 428
+++DMY+KC +D+AK VF + R VV + +++A YA G +GEA +LF +M+ EG
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 429 ISPNIISWNSVI-----------------------LGF------------LRNGQMNEAK 453
ISP++ + +V+ LGF + G M EA+
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 454 DMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETG-IKPSTTTITCALSA 512
+F +M+ ++I+W T+I G ++N NEA+ F +LE P T+ C L A
Sbjct: 453 LVFSEMRV----KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 513 CTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVY 572
C +++ GR IHGY++R+ + SLVDMYAKCG + A +FD SK+L +
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 573 NAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFS 632
MI+GY MHG EA+ALF ++Q GI+ D I+F ++L ACSH+GLV+EG F M
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 633 DHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAE 692
+ +++P++EH+ C+V++L+R G+L +A R I MP PDA I G+LL C ++ +LAE
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 693 YISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEEL 752
++E + +LEP+N G YV ++N YA + +W +V ++R + ++GLRKNPGCSWI+I +
Sbjct: 689 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748
Query: 753 HVFVACDRSHPKTEEIYATL 772
++FVA D S+P+TE I A L
Sbjct: 749 NIFVAGDSSNPETENIEAFL 768
>sp|Q9FNN9|PP370_ARATH Putative pentatricopeptide repeat-containing protein At5g08490
OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1
Length = 849
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/732 (31%), Positives = 396/732 (54%), Gaps = 45/732 (6%)
Query: 82 YGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDAL-DVASRLFC 140
+ +L CV D Y G+ +H+ I+K G ++ V LV YAK + A F
Sbjct: 125 FAIVLPLCVRLGDSYNGKSMHSYIIKAG--LEKDTLVGNALVSMYAKFGFIFPDAYTAFD 182
Query: 141 RLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALG---W 197
+ K+V SW AII + A F M ++ P+ + NVL C ++
Sbjct: 183 GIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIA 242
Query: 198 VGFGRAVHGYVLKVGF-DGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIV 256
GR +H YV++ + VFV +SL+ Y + G +EEA +F M ++++V+WN +I
Sbjct: 243 CRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIA 302
Query: 257 GYVQNGLNEEAIRVFYEMTLEG-VEPTRVSVTSILSASANLDALDEGKQAHAVAVINGME 315
GY N +A ++F+ + +G V P V++ SIL A L L GK+ H+ + +
Sbjct: 303 GYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYL 362
Query: 316 L-DNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQS--------- 365
L D +G+++I+FY++ G A FS M +DI++WN ++ ++ S +
Sbjct: 363 LEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHH 422
Query: 366 --------DVVVASSIVDMYAKCERIDNAKQVFNSIILRDVV-------LWNTLLAAYAD 410
D V S++ + I K+V + ++ L N LL AYA
Sbjct: 423 LLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAK 482
Query: 411 LGRSGEASRLFYQMQLEGISP--NIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNL 468
G A ++F G+S ++S+NS++ G++ +G ++A+ +F +M + +L
Sbjct: 483 CGNVEYAHKIFL-----GLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMST----TDL 533
Query: 469 ITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGY 528
TW+ ++ ++ C NEAI F+E+ G++P+T TI L C +ASL R HGY
Sbjct: 534 TTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGY 593
Query: 529 LIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEA 588
+IR L + +L+D+YAKCG++ A VF ++L ++ AM++GYA+HG EA
Sbjct: 594 IIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEA 652
Query: 589 LALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVN 648
L ++ ++ + I PD + T +L AC HAGL+ +GL+++ + + H +KP+ME + C V+
Sbjct: 653 LMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVD 712
Query: 649 LLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGN 708
L++R G LD+A + MP +P+A+I G+LL C N +L ++ HLLQ E D+ GN
Sbjct: 713 LIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGN 772
Query: 709 YVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEI 768
+V +SN YAA +W V ++R++MK+K ++K GCSW+++ + +VFV+ D SHP+ + I
Sbjct: 773 HVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSI 832
Query: 769 YATLALLGMHVR 780
+ + L + ++
Sbjct: 833 FDLVNALYLQMK 844
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 166/659 (25%), Positives = 298/659 (45%), Gaps = 120/659 (18%)
Query: 75 FQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDV 134
F ++ ++++ C D+ +G+ +H + K G V ++ YAKC +D
Sbjct: 17 FGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSE--VSKSVLNMYAKCRRMDD 74
Query: 135 ASRLFCRLRVKNVFSWAAII-GLNCRVGLSEKALIGFVEMQ-EDGVSPDNFVLPNVLKAC 192
++F ++ + W ++ GL+ G + + F M D P + VL C
Sbjct: 75 CQKMFRQMDSLDPVVWNIVLTGLSVSCG--RETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 193 GALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDL-EEARKVFDGMIARNVVAW 251
LG G+++H Y++K G + V ++L+ MY K G + +A FDG+ ++VV+W
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSW 192
Query: 252 NSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLD---ALDEGKQAHAV 308
N++I G+ +N + +A R F M E EP ++ ++L A++D A G+Q H+
Sbjct: 193 NAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSY 252
Query: 309 AVING-MELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASY-------- 359
V ++ + +S+++FY +VG +E+A +F+RM +D+V+WN++IA Y
Sbjct: 253 VVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFK 312
Query: 360 --------VQSGQ--SDVVVASSIVDMYAKCERIDNAKQVF-----NSIILRDVVLWNTL 404
V G D V SI+ + A+ + + K++ +S +L D + N L
Sbjct: 313 AFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNAL 372
Query: 405 LAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGV 464
++ YA G + A F M + +IISWN+++ F D Q Q L +
Sbjct: 373 ISFYARFGDTSAAYWAFSLMS----TKDIISWNAILDAF---------ADSPKQFQFLNL 419
Query: 465 QPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRA 524
+L+ EAI + TI L C +V + +
Sbjct: 420 LHHLLN---------------EAITL-----------DSVTILSLLKFCINVQGIGKVKE 453
Query: 525 IHGYLIR----HDLCLPTPIVTSLVDMYAKCGNIHQAKRVF-DISPSKELPVYNAMISGY 579
+HGY ++ HD P + +L+D YAKCGN+ A ++F +S + L YN+++SGY
Sbjct: 454 VHGYSVKAGLLHDEEEP-KLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGY 512
Query: 580 AMHG---------------------LAV----------EALALFKNLQQKGIDPDSITFT 608
G L V EA+ +F+ +Q +G+ P+++T
Sbjct: 513 VNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIM 572
Query: 609 NILNACSHAG---LVNEGLELFV-GMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVI 663
N+L C+ LV + + G D ++K G ++++ ++CG+L A V
Sbjct: 573 NLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLK------GTLLDVYAKCGSLKHAYSVF 625
Score = 176 bits (445), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 145/597 (24%), Positives = 277/597 (46%), Gaps = 78/597 (13%)
Query: 177 GVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEA 236
G D+ V +V+KAC ++ + GRA+HG V K+G C V+ S+++MY KC +++
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 237 RKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTL-EGVEPTRVSVTSILSASAN 295
+K+F M + + V WN ++ G + E +R F M + +P+ V+ +L
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVR 134
Query: 296 LDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVG-LLEDAEVVFSRMVERDIVTWNL 354
L GK H+ + G+E D ++G+++++ Y+K G + DA F + ++D+V+WN
Sbjct: 135 LGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNA 194
Query: 355 LIASYVQSG-QSDVVVA-------------SSIVDMYAKCERID------NAKQVFNSII 394
+IA + ++ +D + ++I ++ C +D + +Q+ + ++
Sbjct: 195 IIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVV 254
Query: 395 LRD-----VVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQM 449
R V + N+L++ Y +GR EA+ LF +M S +++SWN VI G+ N +
Sbjct: 255 QRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG----SKDLVSWNVVIAGYASNCEW 310
Query: 450 NEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCA 509
+A +F + G + P + TI
Sbjct: 311 FKAFQLFHNLVHKG----------------------------------DVSPDSVTIISI 336
Query: 510 LSACTDVASLRNGRAIHGYLIRHDLCLP-TPIVTSLVDMYAKCGNIHQAKRVFDISPSKE 568
L C + L +G+ IH Y++RH L T + +L+ YA+ G+ A F + +K+
Sbjct: 337 LPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKD 396
Query: 569 LPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHA---GLVNE--G 623
+ +NA++ +A + L L +L + I DS+T ++L C + G V E G
Sbjct: 397 IISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHG 456
Query: 624 LELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCV 683
+ G+ D + +P + + +++ ++CGN++ A ++ L + SLLS V
Sbjct: 457 YSVKAGLLHDEE-EPKLGN--ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYV 513
Query: 684 KSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKN 740
S + A+ + ++ + + + YA S NE V ++ +G+R N
Sbjct: 514 NSGSHDDAQML---FTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPN 567
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 86/196 (43%), Gaps = 5/196 (2%)
Query: 62 EAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETK 121
EA+ + E++ R + LL C ++ +Q H I++ G R ++
Sbjct: 551 EAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIR---LKGT 607
Query: 122 LVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPD 181
L+ YAKC +L A +F +++ + A++ G ++AL+ + M E + PD
Sbjct: 608 LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPD 667
Query: 182 NFVLPNVLKACGALGWVGFGRAVHGYVLKV-GFDGCVFVASSLIDMYGKCGDLEEARKVF 240
+ + +L AC G + G ++ + V G + + +D+ + G L++A
Sbjct: 668 HVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFV 727
Query: 241 DGM-IARNVVAWNSMI 255
M + N W +++
Sbjct: 728 TQMPVEPNANIWGTLL 743
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/688 (32%), Positives = 368/688 (53%), Gaps = 65/688 (9%)
Query: 100 QIHARILKNGDFFARNE-YVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNC 158
Q HARILK+G A+N+ Y+ KL+ Y+ + + A + + ++S++++I
Sbjct: 36 QAHARILKSG---AQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 159 RVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVF 218
+ L +++ F M G+ PD+ VLPN+ K C L G+ +H G D F
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 219 VASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEG 278
V S+ MY +CG + +ARKVFD M ++VV ++++ Y + G EE +R+ EM G
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 279 VEPTRVSVTSILSASANLDALDEGKQAHAVAVIN-----GMELDNVLGSSIINFYSKVGL 333
+E VS ILS G AV + G D V SS++ VG
Sbjct: 213 IEANIVSWNGILSGFNR-----SGYHKEAVVMFQKIHHLGFCPDQVTVSSVL---PSVG- 263
Query: 334 LEDAEVV-FSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNS 392
D+E++ R++ ++ LL D V S+++DMY K + +FN
Sbjct: 264 --DSEMLNMGRLIHGYVIKQGLL---------KDKCVISAMIDMYGKSGHVYGIISLFNQ 312
Query: 393 IILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEA 452
+ + + N + + G +A +F + + + N++SW S+I G +NG+ EA
Sbjct: 313 FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEA 372
Query: 453 KDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSA 512
++F +MQ GV+PN + TI L A
Sbjct: 373 LELFREMQVAGVKPNHV-----------------------------------TIPSMLPA 397
Query: 513 CTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVY 572
C ++A+L +GR+ HG+ +R L + ++L+DMYAKCG I+ ++ VF++ P+K L +
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 573 NAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFS 632
N++++G++MHG A E +++F++L + + PD I+FT++L+AC GL +EG + F M
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517
Query: 633 DHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAE 692
++ +KP +EH+ C+VNLL R G L EA +I MP +PD+ + G+LL++C N +LAE
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577
Query: 693 YISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEEL 752
+E L LEP+NPG YV LSN YAA G W EV +R+ M+ GL+KNPGCSWIQ+ +
Sbjct: 578 IAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRV 637
Query: 753 HVFVACDRSHPKTEEIYATLALLGMHVR 780
+ +A D+SHP+ ++I + + +R
Sbjct: 638 YTLLAGDKSHPQIDQITEKMDEISKEMR 665
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 141/559 (25%), Positives = 242/559 (43%), Gaps = 109/559 (19%)
Query: 46 SYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARI 105
S+ I +L+K K +++ + + M + L + C G+QIH
Sbjct: 83 SFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVS 142
Query: 106 LKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVK-------------------- 145
+G + +V+ + Y +C + A ++F R+ K
Sbjct: 143 CVSG--LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEE 200
Query: 146 ---------------NVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLK 190
N+ SW I+ R G ++A++ F ++ G PD + +VL
Sbjct: 201 VVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLP 260
Query: 191 ACGALGWVGFGRAVHGYVLKVGF--DGCVFVASSLIDMYGKCGDLEEARKVF-------- 240
+ G + GR +HGYV+K G D CV S++IDMYGK G + +F
Sbjct: 261 SVGDSEMLNMGRLIHGYVIKQGLLKDKCVI--SAMIDMYGKSGHVYGIISLFNQFEMMEA 318
Query: 241 ------------DGMIAR---------------NVVAWNSMIVGYVQNGLNEEAIRVFYE 273
+G++ + NVV+W S+I G QNG + EA+ +F E
Sbjct: 319 GVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFRE 378
Query: 274 MTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNV-LGSSIINFYSKVG 332
M + GV+P V++ S+L A N+ AL G+ H AV + LDNV +GS++I+ Y+K G
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL-LDNVHVGSALIDMYAKCG 437
Query: 333 LLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNS 392
+ +++VF+ M +++V WN L+ + G++ V++ +F S
Sbjct: 438 RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS------------------IFES 479
Query: 393 IILR----DVVLWNTLLAAYADLGRSGEASRLFYQMQLE-GISPNIISWNSVILGFLRNG 447
++ D + + +LL+A +G + E + F M E GI P + ++ ++ R G
Sbjct: 480 LMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAG 539
Query: 448 QMNEAKDMFLQMQSLGVQPNLITWTTLI-SGLTQNSCGNEAI----LFFQEMLETGIKPS 502
++ EA D+ +M +P+ W L+ S QN+ I LF E G
Sbjct: 540 KLQEAYDLIKEMP---FEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVL 596
Query: 503 TTTITCALSACTDVASLRN 521
+ I A T+V S+RN
Sbjct: 597 LSNIYAAKGMWTEVDSIRN 615
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/764 (30%), Positives = 391/764 (51%), Gaps = 93/764 (12%)
Query: 99 QQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLR-VKNVFSWAAIIGLN 157
++IHA ++ G +++ KL+ Y+ + +F R+ KNV+ W +II
Sbjct: 24 RRIHALVISLG--LDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAF 81
Query: 158 CRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCV 217
+ GL +AL + +++E VSPD + P+V+KAC L G V+ +L +GF+ +
Sbjct: 82 SKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDL 141
Query: 218 FVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLE 277
FV ++L+DMY + G L AR+VFD M R++V+WNS+I GY +G EEA+ +++E+
Sbjct: 142 FVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNS 201
Query: 278 GVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDA 337
+ P +V+S+L A NL + +G+ H A+ +G+ V+ + ++ Y K DA
Sbjct: 202 WIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDA 261
Query: 338 EVVFSRMVERDIVTWNLLIASYVQ----------------SGQSDVVVASSI-------- 373
VF M RD V++N +I Y++ + D++ SS+
Sbjct: 262 RRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLR 321
Query: 374 ---------------------------VDMYAKCERIDNAKQVFNSIILRDVVLWNTLLA 406
+D+YAKC + A+ VFNS+ +D V WN++++
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381
Query: 407 AYADLGRSGEASRLFYQMQL-----------------------------------EGISP 431
Y G EA +LF M + GI
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICI 441
Query: 432 NIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFF 491
++ N++I + + G++ ++ +F M + + +TW T+IS + +
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMGT----GDTVTWNTVISACVRFGDFATGLQVT 497
Query: 492 QEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKC 551
+M ++ + P T L C +A+ R G+ IH L+R I +L++MY+KC
Sbjct: 498 TQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKC 557
Query: 552 GNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNIL 611
G + + RVF+ +++ + MI Y M+G +AL F ++++ GI PDS+ F I+
Sbjct: 558 GCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAII 617
Query: 612 NACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPD 671
ACSH+GLV+EGL F M + +++ P +EH+ CVV+LLSR + +A I MP PD
Sbjct: 618 YACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPD 677
Query: 672 AHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDI 731
A I S+L C S + E AE +S +++L PD+PG + SNAYAA +W++VS +R
Sbjct: 678 ASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKS 737
Query: 732 MKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEIYATLALL 775
+K+K + KNPG SWI++G+ +HVF + D S P++E IY +L +L
Sbjct: 738 LKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEIL 781
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/501 (21%), Positives = 225/501 (44%), Gaps = 115/501 (22%)
Query: 282 TRVS---VTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAE 338
TRVS ++ LS+S+NL+ L ++ HA+ + G++ + +I+ YS +
Sbjct: 3 TRVSSPFISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSL 59
Query: 339 VVFSRMV-ERDIVTWNLLIASYVQSG---------------------------------- 363
VF R+ +++ WN +I ++ ++G
Sbjct: 60 SVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL 119
Query: 364 ------------------QSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLL 405
+SD+ V +++VDMY++ + A+QVF+ + +RD+V WN+L+
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLI 179
Query: 406 AAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGF-----LRNGQ------------ 448
+ Y+ G EA ++++++ I P+ + +SV+ F ++ GQ
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239
Query: 449 ------------------MNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILF 490
+A+ +F +M + +++ T+I G + E++
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDV----RDSVSYNTMICGYLKLEMVEESVRM 295
Query: 491 FQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAK 550
F E L+ KP T++ L AC + L + I+ Y+++ L + + L+D+YAK
Sbjct: 296 FLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAK 354
Query: 551 CGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNI 610
CG++ A+ VF+ K+ +N++ISGY G +EA+ LFK + D IT+ +
Sbjct: 355 CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Query: 611 LNACSH-------AGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVI 663
++ + GL + G++ G+ D V ++ +++ ++CG + ++L++
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIK--SGICIDLSVSNAL------IDMYAKCGEVGDSLKIF 466
Query: 664 LTMPCDPDAHIIGSLLSTCVK 684
+M D +++S CV+
Sbjct: 467 SSMGTG-DTVTWNTVISACVR 486
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/729 (31%), Positives = 373/729 (51%), Gaps = 26/729 (3%)
Query: 44 YKSYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHA 103
+ S+ IS LSK + EA+ L +M P + +L C + G+Q+H
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312
Query: 104 RILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLS 163
+LK G F+ + YV LV Y L A +F + ++ ++ +I + G
Sbjct: 313 LVLKLG--FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 370
Query: 164 EKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSL 223
EKA+ F M DG+ PD+ L +++ AC A G + G+ +H Y K+GF + +L
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 224 IDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEE---AIRVFYEMTLEGVE 280
+++Y KC D+E A F NVV WN M+V Y GL ++ + R+F +M +E +
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIV 487
Query: 281 PTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVV 340
P + + SIL L L+ G+Q H+ + +L+ + S +I+ Y+K+G L+ A +
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 341 FSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVL 400
R +D+V+W +IA Y Q D + + +Q+ + I D V
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTT--------------FRQMLDRGIRSDEVG 593
Query: 401 WNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQ 460
++A A L E ++ Q + G S ++ N+++ + R G++ E+ F Q +
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 461 SLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLR 520
+ + I W L+SG Q+ EA+ F M GI + T A+ A ++ A+++
Sbjct: 654 A----GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 521 NGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYA 580
G+ +H + + T + +L+ MYAKCG+I A++ F +K +NA+I+ Y+
Sbjct: 710 QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 769
Query: 581 MHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSM 640
HG EAL F + + P+ +T +L+ACSH GLV++G+ F M S++ + P
Sbjct: 770 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 829
Query: 641 EHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQ 700
EH+ CVV++L+R G L A I MP PDA + +LLS CV E+ E+ + HLL+
Sbjct: 830 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 889
Query: 701 LEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDR 760
LEP++ YV LSN YA S +W+ R MKEKG++K PG SWI++ +H F D+
Sbjct: 890 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 949
Query: 761 SHPKTEEIY 769
+HP +EI+
Sbjct: 950 NHPLADEIH 958
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/582 (23%), Positives = 236/582 (40%), Gaps = 106/582 (18%)
Query: 173 MQEDGVSPDNFVLPNVLKAC-GALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCG 231
++ G+ P++ L +L+ C G + GR +H +LK+G D ++ L D Y G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 232 DLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILS 291
DL A KVFD M R + WN MI L E +F M E V P + + +L
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 292 A-SANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIV 350
A A D +Q HA + G+ V+ + +I+ YS+ G ++ A VF + +D
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 254
Query: 351 TWNLLIASYVQSGQSDVVVASSIVDMY---------------AKCERID----------- 384
+W +I+ + + + DMY + C++I+
Sbjct: 255 SWVAMISG-LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 385 ---------------------------NAKQVFNSIILRDVVLWNTLLAAYADLGRSGEA 417
+A+ +F+++ RD V +NTL+ + G +A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 418 SRLFYQMQLEGISPNIISWNSVI---------------------LGFLRNGQ-------- 448
LF +M L+G+ P+ + S++ LGF N +
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 449 ------MNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPS 502
+ A D FL+ + N++ W ++ + F++M I P+
Sbjct: 434 YAKCADIETALDYFLETEV----ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 503 TTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFD 562
T L C + L G IH +I+ + L + + L+DMYAK G + A +
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Query: 563 ISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNE 622
K++ + MI+GY + +AL F+ + +GI D + TN ++AC+ + E
Sbjct: 550 RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE 609
Query: 623 GLELFV-----GMFSDHQVKPSMEHFGCVVNLLSRCGNLDEA 659
G ++ G SD + ++ V L SRCG ++E+
Sbjct: 610 GQQIHAQACVSGFSSDLPFQNAL------VTLYSRCGKIEES 645
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/649 (33%), Positives = 364/649 (56%), Gaps = 33/649 (5%)
Query: 148 FSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGY 207
F + ++I GL +A++ F+ M G+SPD + P L AC G G +HG
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 208 VLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEA 267
++K+G+ +FV +SL+ Y +CG+L+ ARKVFD M RNVV+W SMI GY + ++A
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 268 IRVFYEMTL-EGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIIN 326
+ +F+ M E V P V++ ++SA A L+ L+ G++ +A +G+E+++++ S++++
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 327 FYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSG--QSDVVVASSIVDMYAKCERID 384
Y K ++ A+ +F ++ N + ++YV+ G + + V + ++D + +RI
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 385 NAKQVFNSIILRDVVLW--------------------NTLLAAYADLGRSGEASRLFYQM 424
+ + LR++ LW N L+ Y R A R+F +M
Sbjct: 340 MLSAISSCSQLRNI-LWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 425 QLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCG 484
+ +++WNS++ G++ NG+++ A + F M + N+++W T+ISGL Q S
Sbjct: 399 S----NKTVVTWNSIVAGYVENGEVDAAWETFETMP----EKNIVSWNTIISGLVQGSLF 450
Query: 485 NEAILFFQEML-ETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTS 543
EAI F M + G+ T+ SAC + +L + I+ Y+ ++ + L + T+
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTT 510
Query: 544 LVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPD 603
LVDM+++CG+ A +F+ ++++ + A I AM G A A+ LF ++ ++G+ PD
Sbjct: 511 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Query: 604 SITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVI 663
+ F L ACSH GLV +G E+F M H V P H+GC+V+LL R G L+EA+++I
Sbjct: 571 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 664 LTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWN 723
MP +P+ I SLL+ C E+A Y +E + L P+ G+YV LSN YA++GRWN
Sbjct: 631 EDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWN 690
Query: 724 EVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEIYATL 772
++++VR MKEKGLRK PG S IQI + H F + D SHP+ I A L
Sbjct: 691 DMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
Score = 199 bits (507), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 153/588 (26%), Positives = 279/588 (47%), Gaps = 64/588 (10%)
Query: 35 ESDNSYESLYKSYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGEL--LQGCVYK 92
E+ SY + + Y I + EA+ L M N I P+ Y L C
Sbjct: 91 ENSESYGTCFM-YNSLIRGYASSGLCNEAILLFLRMM--NSGISPDKYTFPFGLSACAKS 147
Query: 93 RDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAA 152
R G QIH I+K G +A++ +V+ LV FYA+C LD A ++F + +NV SW +
Sbjct: 148 RAKGNGIQIHGLIVKMG--YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 153 IIGLNCRVGLSEKALIGFVEM-QEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKV 211
+I R ++ A+ F M +++ V+P++ + V+ AC L + G V+ ++
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 212 GFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVF 271
G + + S+L+DMY KC ++ A+++FD A N+ N+M YV+ GL EA+ VF
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 272 YEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKV 331
M GV P R+S+ S +S+ + L + GK H + NG E + + +++I+ Y K
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 332 GLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFN 391
+ A +F RM + +VTWN ++A YV++G+ +D A + F
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE------------------VDAAWETFE 427
Query: 392 SIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQ-LEGISPNIISWNSVILGFLRNGQMN 450
++ +++V WNT+++ EA +F MQ EG++ + ++ S+ G ++
Sbjct: 428 TMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALD 487
Query: 451 EAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGN------------------------- 485
AK ++ ++ G+Q ++ TTL+ ++ CG+
Sbjct: 488 LAKWIYYYIEKNGIQLDVRLGTTLVDMFSR--CGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 486 --------EAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLP 537
AI F +M+E G+KP AL+AC+ ++ G+ I +++ P
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 538 TPI-VTSLVDMYAKCGNIHQAKRVFDISPSKELPV-YNAMISGYAMHG 583
+ +VD+ + G + +A ++ + P + V +N++++ + G
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust.
Identities = 232/731 (31%), Positives = 372/731 (50%), Gaps = 91/731 (12%)
Query: 126 YAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVL 185
Y + L A LF + +V +W +I + + G A+ F M++ V L
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 186 PNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIA 245
+VL A G + + G VH +K+G ++V SSL+ MY KC +E A KVF+ +
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 246 RNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQA 305
+N V WN+MI GY NG + + + +F +M G + TS+LS A L+ G Q
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 306 HAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASY------ 359
H++ + + + +G+++++ Y+K G LEDA +F RM +RD VTWN +I SY
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510
Query: 360 ---------------------------------------------VQSG-QSDVVVASSI 373
V+ G D+ SS+
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL 570
Query: 374 VDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNI 433
+DMY+KC I +A++VF+S+ VV N L+A Y+ EA LF +M G++P+
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSE 629
Query: 434 ISWNSVI----------LGFLRNGQMNE----AKDMFLQMQSLGVQPN------------ 467
I++ +++ LG +GQ+ + ++ +L + LG+ N
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFS 689
Query: 468 -------LITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLR 520
++ WT ++SG +QN EA+ F++EM G+ P T L C+ ++SLR
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Query: 521 NGRAIHG--YLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFD-ISPSKELPVYNAMIS 577
GRAIH + + HDL T +L+DMYAKCG++ + +VFD + + +N++I+
Sbjct: 750 EGRAIHSLIFHLAHDLDELTS--NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLIN 807
Query: 578 GYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVK 637
GYA +G A +AL +F +++Q I PD ITF +L ACSHAG V++G ++F M + ++
Sbjct: 808 GYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIE 867
Query: 638 PSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEH 697
++H C+V+LL R G L EA I PDA + SLL C + E +E
Sbjct: 868 ARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEK 927
Query: 698 LLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVA 757
L++LEP N YV LSN YA+ G W + + +R +M+++G++K PG SWI + + H+F A
Sbjct: 928 LIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAA 987
Query: 758 CDRSHPKTEEI 768
D+SH + +I
Sbjct: 988 GDKSHSEIGKI 998
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 207/849 (24%), Positives = 353/849 (41%), Gaps = 185/849 (21%)
Query: 54 LSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNG-DFF 112
L QI + + + +C+ F+ +++ E+ Q + G+ +H++ L G D
Sbjct: 38 LPSHDQIHQRLLEICLGQCKLFK-SRKVFDEMPQRLALA--LRIGKAVHSKSLILGIDSE 94
Query: 113 ARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVE 172
R + +V YAKC + A + F L K+V +W +++ + +G K L FV
Sbjct: 95 GR---LGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVS 150
Query: 173 MQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGD 232
+ E+ + P+ F VL C V FGR +H ++K+G + + +L+DMY KC
Sbjct: 151 LFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDR 210
Query: 233 LEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSA 292
+ +AR+VF+ ++ N V W + GYV+ GL EEA+ VF M EG P
Sbjct: 211 ISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRP----------- 259
Query: 293 SANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTW 352
D++ ++IN Y ++G L+DA ++F M D+V W
Sbjct: 260 ------------------------DHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAW 295
Query: 353 NLLIASYVQSG------------------------------------------------- 363
N++I+ + + G
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK 355
Query: 364 ---QSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRL 420
S++ V SS+V MY+KCE+++ A +VF ++ ++ V WN ++ YA G S + L
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMEL 415
Query: 421 FYQMQLEG-----------------------------------ISPNIISWNSVILGFLR 445
F M+ G ++ N+ N+++ + +
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 446 NGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTT 505
G + +A+ +F +M + +TW T+I Q+ +EA F+ M GI
Sbjct: 476 CGALEDARQIFERM----CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGAC 531
Query: 506 ITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISP 565
+ L ACT V L G+ +H ++ L +SL+DMY+KCG I A++VF P
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 566 SKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNAC----------- 614
+ NA+I+GY+ + L EA+ LF+ + +G++P ITF I+ AC
Sbjct: 592 EWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650
Query: 615 -----SHAGLVNEGLEL---FVGM-------------FSDHQVKPSMEHFGCVVNLLSRC 653
+ G +EG L +GM FS+ S+ + +++ S+
Sbjct: 651 FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710
Query: 654 GNLDEALRVILTMPCD---PDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPD-NPGNY 709
G +EAL+ M D PD ++L C + I + L D +
Sbjct: 711 GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS 770
Query: 710 VALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQI----------GEELHVFVACD 759
L + YA G SQV D M+ R++ SW + + L +F +
Sbjct: 771 NTLIDMYAKCGDMKGSSQVFDEMR----RRSNVVSWNSLINGYAKNGYAEDALKIFDSMR 826
Query: 760 RSHPKTEEI 768
+SH +EI
Sbjct: 827 QSHIMPDEI 835
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 188/751 (25%), Positives = 328/751 (43%), Gaps = 139/751 (18%)
Query: 76 QIGPE--IYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALD 133
QI P + +L C + ++ G+QIH ++K G RN Y LV YAKCD +
Sbjct: 155 QIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG--LERNSYCGGALVDMYAKCDRIS 212
Query: 134 VASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACG 193
A R+F + N W + + GL E+A++ F M+++G PD+ V
Sbjct: 213 DARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV----- 267
Query: 194 ALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNS 253
I+ Y + G L++AR +F M + +VVAWN
Sbjct: 268 ------------------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNV 297
Query: 254 MIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVING 313
MI G+ + G AI F+ M V+ TR ++ S+LSA + LD G HA A+ G
Sbjct: 298 MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 357
Query: 314 MELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQS-------- 365
+ + +GSS+++ YSK +E A VF + E++ V WN +I Y +G+S
Sbjct: 358 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFM 417
Query: 366 --------------------------------------------DVVVASSIVDMYAKCE 381
++ V +++VDMYAKC
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 477
Query: 382 RIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGI------------ 429
+++A+Q+F + RD V WNT++ +Y EA LF +M L GI
Sbjct: 478 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 537
Query: 430 -----------------------SPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQP 466
++ + +S+I + + G + +A+ +F + V
Sbjct: 538 ACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV-- 595
Query: 467 NLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIH 526
++ LI+G +QN+ EA++ FQEML G+ PS T + AC SL G H
Sbjct: 596 --VSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFH 652
Query: 527 GYLIRHDLCLPTPIV-TSLVDMYAKCGNIHQAKRVF-DISPSKELPVYNAMISGYAMHGL 584
G + + + SL+ MY + +A +F ++S K + ++ M+SG++ +G
Sbjct: 653 GQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGF 712
Query: 585 AVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFS-DHQVKPSMEHF 643
EAL +K ++ G+ PD TF +L CS + EG + +F H + +
Sbjct: 713 YEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN- 771
Query: 644 GCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQ--L 701
++++ ++CG++ + +V M + SL++ K+ E A I + + Q +
Sbjct: 772 -TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHI 830
Query: 702 EPDNPGNYVALSNAYAASGRWNEVSQVRDIM 732
PD ++ + A + +G+ ++ ++ ++M
Sbjct: 831 MPDEI-TFLGVLTACSHAGKVSDGRKIFEMM 860
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 160/308 (51%), Gaps = 9/308 (2%)
Query: 57 EKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNE 116
+ + EAV L EM R + +++ C + G Q H +I K G F + E
Sbjct: 607 QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG-FSSEGE 665
Query: 117 YVETKLVVFYAKCDALDVASRLFCRLRV-KNVFSWAAIIGLNCRVGLSEKALIGFVEMQE 175
Y+ L+ Y + A LF L K++ W ++ + + G E+AL + EM+
Sbjct: 666 YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725
Query: 176 DGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEE 235
DGV PD VL+ C L + GRA+H + + D +++LIDMY KCGD++
Sbjct: 726 DGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKG 785
Query: 236 ARKVFDGMIAR-NVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASA 294
+ +VFD M R NVV+WNS+I GY +NG E+A+++F M + P ++ +L+A +
Sbjct: 786 SSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS 845
Query: 295 NLDALDEGKQAHAVAVIN-GME--LDNVLGSSIINFYSKVGLLEDA-EVVFSRMVERDIV 350
+ + +G++ + + G+E +D+V + +++ + G L++A + + ++ ++ D
Sbjct: 846 HAGKVSDGRKIFEMMIGQYGIEARVDHV--ACMVDLLGRWGYLQEADDFIEAQNLKPDAR 903
Query: 351 TWNLLIAS 358
W+ L+ +
Sbjct: 904 LWSSLLGA 911
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 229/712 (32%), Positives = 361/712 (50%), Gaps = 85/712 (11%)
Query: 96 YTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIG 155
+ G IH ++K G + V + + FY +C +L A++LF + ++ +W I+
Sbjct: 4 FLGLTIHGGLIKRG-LDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVM 62
Query: 156 LNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDG 215
+N R G EKA+ F EMQ G + + +L+ C GR +HGYVL++G +
Sbjct: 63 VNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 216 CVFVASSLIDMYGKCGDLEEARKVFDGMIARN---------------------------- 247
V + +SLI MY + G LE +RKVF+ M RN
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 248 -------VVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALD 300
+V WNS++ GY GL+++AI V M + G++P+ S++S+L A A L
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 301 EGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYV 360
GK H + N + D + +++I+ Y K G L A +VF M ++IV WN L+
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLV---- 298
Query: 361 QSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRL 420
S + A + D A R++ I D + WN+L + YA LG+ +A +
Sbjct: 299 ----SGLSYACLLKDAEALMIRMEKEG------IKPDAITWNSLASGYATLGKPEKALDV 348
Query: 421 FYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQ 480
+M+ +G++PN++SW ++ G +NG A +F++MQ GV PN T +TL+ L
Sbjct: 349 IGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL-- 406
Query: 481 NSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPI 540
C + L +G+ +HG+ +R +L +
Sbjct: 407 -------------------------------GCLSL--LHSGKEVHGFCLRKNLICDAYV 433
Query: 541 VTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGI 600
T+LVDMY K G++ A +F +K L +N M+ GYAM G E +A F + + G+
Sbjct: 434 ATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGM 493
Query: 601 DPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEAL 660
+PD+ITFT++L+ C ++GLV EG + F M S + + P++EH C+V+LL R G LDEA
Sbjct: 494 EPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAW 553
Query: 661 RVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASG 720
I TM PDA I G+ LS+C + ELAE + L LEP N NY+ + N Y+
Sbjct: 554 DFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLN 613
Query: 721 RWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEIYATL 772
RW +V ++R++M+ +R SWIQI + +H+F A ++HP +IY L
Sbjct: 614 RWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFEL 665
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 236/514 (45%), Gaps = 72/514 (14%)
Query: 62 EAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETK 121
+AV+L EM+ + +LLQ C K G+QIH +L+ G N +
Sbjct: 72 KAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLG--LESNVSMCNS 129
Query: 122 LVVFYAKCDALDVASRLFCRLRVKNVFSWAAII----------------------GLNCR 159
L+V Y++ L+++ ++F ++ +N+ SW +I+ GL
Sbjct: 130 LIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD 189
Query: 160 V-------------GLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHG 206
+ GLS+ A+ MQ G+ P + ++L+A G + G+A+HG
Sbjct: 190 IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHG 249
Query: 207 YVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEE 266
Y+L+ V+V ++LIDMY K G L AR VFD M A+N+VAWNS++ G L ++
Sbjct: 250 YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKD 309
Query: 267 AIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVL-----G 321
A + M EG++P ++ S+ S A L GK A+ VI M+ V
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATL-----GKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 322 SSIINFYSKVGLLEDAEVVFSRMVERDI----VTWNLLIA-----SYVQSGQS------- 365
++I + SK G +A VF +M E + T + L+ S + SG+
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLR 424
Query: 366 -----DVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRL 420
D VA+++VDMY K + +A ++F I + + WN +L YA GR E
Sbjct: 425 KNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAA 484
Query: 421 FYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQS-LGVQPNLITWTTLISGLT 479
F M G+ P+ I++ SV+ +G + E F M+S G+ P + + ++ L
Sbjct: 485 FSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLG 544
Query: 480 QNSCGNEAILFFQEMLETGIKPSTTTITCALSAC 513
++ +EA F Q M +KP T LS+C
Sbjct: 545 RSGYLDEAWDFIQTM---SLKPDATIWGAFLSSC 575
Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 136/312 (43%), Gaps = 72/312 (23%)
Query: 61 REAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVET 120
++A+ +L M+ + LLQ + G+ IH IL+N ++ + YVET
Sbjct: 207 KDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWY--DVYVET 264
Query: 121 KLVVFYAKCDALDVASRLFCRLRVKNVFSWAAII-GLN---------------------- 157
L+ Y K L A +F + KN+ +W +++ GL+
Sbjct: 265 TLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP 324
Query: 158 ------------CRVGLSEKALIGFVEMQEDGVSPD---------------NF------- 183
+G EKAL +M+E GV+P+ NF
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 184 -------VLPN------VLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKC 230
V PN +LK G L + G+ VHG+ L+ +VA++L+DMYGK
Sbjct: 385 IKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKS 444
Query: 231 GDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSIL 290
GDL+ A ++F G+ +++ +WN M++GY G EE I F M G+EP ++ TS+L
Sbjct: 445 GDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
Query: 291 SASANLDALDEG 302
S N + EG
Sbjct: 505 SVCKNSGLVQEG 516
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 240/798 (30%), Positives = 416/798 (52%), Gaps = 98/798 (12%)
Query: 78 GPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASR 137
G + LLQ ++ +H +I+ G + Y+ L+ Y++ + A +
Sbjct: 43 GRREFARLLQLRASDDLLHYQNVVHGQIIVWG--LELDTYLSNILINLYSRAGGMVYARK 100
Query: 138 LFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEM-QEDGVSPDNFVLPNVLKACGALG 196
+F ++ +N+ SW+ ++ G+ E++L+ F+E + SP+ ++L + ++AC L
Sbjct: 101 VFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD 160
Query: 197 WVGFGR----AVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWN 252
G GR + +++K GFD V+V + LID Y K G+++ AR VFD + ++ V W
Sbjct: 161 --GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWT 218
Query: 253 SMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVIN 312
+MI G V+ G + ++++FY++ + V P ++++LSA + L L+ GKQ HA +
Sbjct: 219 TMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRY 278
Query: 313 GMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSG--------- 363
G+E+D L + +I+ Y K G + A +F+ M ++I++W L++ Y Q+
Sbjct: 279 GLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELF 338
Query: 364 -------------------------------------------QSDVVVASSIVDMYAKC 380
+D V +S++DMYAKC
Sbjct: 339 TSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC 398
Query: 381 ERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRS---GEASRLFYQMQLEGISPNIISWN 437
+ + +A++VF+ DVVL+N ++ Y+ LG EA +F M+ I P+++++
Sbjct: 399 DCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFV 458
Query: 438 SVI--------LGFLR--NGQMNE----------------------AKDMFLQMQSLGVQ 465
S++ LG + +G M + KD L + V+
Sbjct: 459 SLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK 518
Query: 466 PNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAI 525
+L+ W ++ +G Q S EA+ F E+ + +P T ++A ++AS++ G+
Sbjct: 519 -DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEF 577
Query: 526 HGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLA 585
H L++ L I +L+DMYAKCG+ A + FD + S+++ +N++IS YA HG
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEG 637
Query: 586 VEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGC 645
+AL + + + +GI+P+ ITF +L+ACSHAGLV +GL+ F M ++P EH+ C
Sbjct: 638 KKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVC 696
Query: 646 VVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDN 705
+V+LL R G L++A +I MP P A + SLLS C K+ ELAE+ +E + +P +
Sbjct: 697 MVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKD 756
Query: 706 PGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKT 765
G++ LSN YA+ G W E +VR+ MK +G+ K PG SWI I +E+H+F++ D+SH K
Sbjct: 757 SGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKA 816
Query: 766 EEIYATLALLGMHVRLVS 783
+IY L L + +R VS
Sbjct: 817 NQIYEVLDDLLVQIRGVS 834
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/744 (30%), Positives = 366/744 (49%), Gaps = 102/744 (13%)
Query: 82 YGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCR 141
+ LL+ C+ RD G+ +HAR+++ + + L+ Y+K A +F
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFD--IEPDSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 142 LR---VKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWV 198
+R ++V SW+A++ G A+ FVE E G+ P+++ V++AC +V
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFV 182
Query: 199 GFGRAVHGYVLKVG-FDGCVFVASSLIDMYGKC-GDLEEARKVFDGMIARNVVAWNSMIV 256
G GR G+++K G F+ V V SLIDM+ K E A KVFD M NVV W MI
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 257 GYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMEL 316
+Q G EAIR F +M L G E + +++S+ SA A L+ L
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLS---------------- 286
Query: 317 DNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDM 376
LG + ++ + GL++D E S+VDM
Sbjct: 287 ---LGKQLHSWAIRSGLVDDVEC--------------------------------SLVDM 311
Query: 377 YAKCE---RIDNAKQVFNSIILRDVVLWNTLLAAY-ADLGRSGEASRLFYQMQLEG-ISP 431
YAKC +D+ ++VF+ + V+ W L+ Y + + EA LF +M +G + P
Sbjct: 312 YAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEP 371
Query: 432 NIISW-----------------------------------NSVILGFLRNGQMNEAKDMF 456
N ++ NSVI F+++ +M +A+ F
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAF 431
Query: 457 LQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDV 516
+ + NL+++ T + G +N +A E+ E + S T LS +V
Sbjct: 432 ESLS----EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANV 487
Query: 517 ASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMI 576
S+R G IH +++ L P+ +L+ MY+KCG+I A RVF+ ++ + + +MI
Sbjct: 488 GSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMI 547
Query: 577 SGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQV 636
+G+A HG A+ L F + ++G+ P+ +T+ IL+ACSH GLV+EG F M+ DH++
Sbjct: 548 TGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKI 607
Query: 637 KPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISE 696
KP MEH+ C+V+LL R G L +A I TMP D + + L C + TEL + +
Sbjct: 608 KPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAAR 667
Query: 697 HLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFV 756
+L+L+P+ P Y+ LSN YA +G+W E +++R MKE+ L K GCSWI++G+++H F
Sbjct: 668 KILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFY 727
Query: 757 ACDRSHPKTEEIYATLALLGMHVR 780
D +HP +IY L L ++
Sbjct: 728 VGDTAHPNAHQIYDELDRLITEIK 751
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 232/484 (47%), Gaps = 48/484 (9%)
Query: 35 ESDNSYESLYKSYFHQISSL---------SKEKQI---REAVDLLTEMKCRNFQIGPEIY 82
+ +NS+E+ YK F ++S L ++ Q+ REA+ +M F+
Sbjct: 214 KGENSFENAYK-VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTL 272
Query: 83 GELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDA---LDVASRLF 139
+ C ++ G+Q+H+ +++G + VE LV YAKC A +D ++F
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLV----DDVECSLVDMYAKCSADGSVDDCRKVF 328
Query: 140 CRLRVKNVFSWAAII-GLNCRVGLSEKALIGFVEMQEDG-VSPDNFVLPNVLKACGALGW 197
R+ +V SW A+I G L+ +A+ F EM G V P++F + KACG L
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 198 VGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVG 257
G+ V G K G VA+S+I M+ K +E+A++ F+ + +N+V++N+ + G
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 258 YVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELD 317
+N E+A ++ E+T + + + S+LS AN+ ++ +G+Q H+ V G+ +
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508
Query: 318 NVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMY 377
+ +++I+ YSK G ++ A VF+ M R++++W +I + + G + V+
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVL-------- 560
Query: 378 AKCERIDNAKQVFNSIILRDV----VLWNTLLAAYADLGRSGEASRLFYQM-QLEGISPN 432
+ FN +I V V + +L+A + +G E R F M + I P
Sbjct: 561 ----------ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPK 610
Query: 433 IISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQ 492
+ + ++ R G + +A F + ++ Q +++ W T + +S L +
Sbjct: 611 MEHYACMVDLLCRAGLLTDA---FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAAR 667
Query: 493 EMLE 496
++LE
Sbjct: 668 KILE 671
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 111/234 (47%), Gaps = 16/234 (6%)
Query: 32 KLRESDNSYESLYK----SYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQ 87
++ ++ ++ESL + SY + + +A LL+E+ R + + LL
Sbjct: 423 RMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLS 482
Query: 88 GCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNV 147
G + G+QIH++++K G + N+ V L+ Y+KC ++D ASR+F + +NV
Sbjct: 483 GVANVGSIRKGEQIHSQVVKLG--LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Query: 148 FSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGAL-----GWVGFGR 202
SW ++I + G + + L F +M E+GV P+ +L AC + GW F
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNS 600
Query: 203 AVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGM-IARNVVAWNSMI 255
+ +K + + ++D+ + G L +A + + M +V+ W + +
Sbjct: 601 MYEDHKIKPKMEH----YACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 494 MLETGIKP-STTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCG 552
M GI+P + T + L +C R G+ +H LI D+ + + SL+ +Y+K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 553 NIHQAKRVFDISP---SKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTN 609
+ +A+ VF+ +++ ++AM++ Y +G ++A+ +F + G+ P+ +T
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 610 ILNACSHAGLVNEG 623
++ ACS++ V G
Sbjct: 172 VIRACSNSDFVGVG 185
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/758 (30%), Positives = 378/758 (49%), Gaps = 103/758 (13%)
Query: 121 KLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSP 180
K++ Y+K + + A+ F + V++V SW +++ + G S K++ FV+M +G+
Sbjct: 119 KMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF 178
Query: 181 DNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVF 240
D +LK C L G +HG V++VG D V AS+L+DMY K E+ +VF
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 238
Query: 241 DGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALD 300
G+ +N V+W+++I G VQN L A++ F EM ++ S+L + A L L
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 298
Query: 301 EGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYV 360
G Q HA A+ + D ++ ++ ++ Y+K ++DA+++F + ++N +I Y
Sbjct: 299 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 361 Q------------------------------------SGQSD------VVVASSI----- 373
Q G S+ + + SS+
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC 418
Query: 374 -----VDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEG 428
+DMY KC+ + A +VF+ + RD V WN ++AA+ G+ E LF M
Sbjct: 419 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR 478
Query: 429 ISPNIISWNSVI-------LG---------------------------FLRNGQMNEAKD 454
I P+ ++ S++ LG + + G + EA+
Sbjct: 479 IEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 538
Query: 455 M---FLQ-------------MQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETG 498
+ F Q M + +Q ++W ++ISG +A + F M+E G
Sbjct: 539 IHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG 598
Query: 499 IKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAK 558
I P T L C ++AS G+ IH +I+ +L I ++LVDMY+KCG++H ++
Sbjct: 599 ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSR 658
Query: 559 RVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAG 618
+F+ S ++ +NAMI GYA HG EA+ LF+ + + I P+ +TF +IL AC+H G
Sbjct: 659 LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 718
Query: 619 LVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSL 678
L+++GLE F M D+ + P + H+ +V++L + G + AL +I MP + D I +L
Sbjct: 719 LIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTL 778
Query: 679 LSTC-VKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGL 737
L C + N E+AE + LL+L+P + Y LSN YA +G W +VS +R M+ L
Sbjct: 779 LGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKL 838
Query: 738 RKNPGCSWIQIGEELHVFVACDRSHPKTEEIYATLALL 775
+K PGCSW+++ +ELHVF+ D++HP+ EEIY L L+
Sbjct: 839 KKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLI 876
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/527 (26%), Positives = 248/527 (47%), Gaps = 67/527 (12%)
Query: 174 QEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSL---------- 223
Q + VS NF V K C G + G+ H +++ GF FV + L
Sbjct: 42 QVNSVSTTNFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDF 99
Query: 224 ---------------------IDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNG 262
I+ Y K D+ +A F+ M R+VV+WNSM+ GY+QNG
Sbjct: 100 VSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNG 159
Query: 263 LNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGS 322
+ ++I VF +M EG+E + IL + L+ G Q H + V G + D V S
Sbjct: 160 ESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAAS 219
Query: 323 SIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCER 382
++++ Y+K ++ VF + E++ V+W+ +IA VQ+ + S + + + ++
Sbjct: 220 ALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN-----LLSLALKFFKEMQK 274
Query: 383 ID-NAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVIL 441
++ Q + +LR AA ++L G+ L + + I + +
Sbjct: 275 VNAGVSQSIYASVLRSC-------AALSELRLGGQ---LHAHALKSDFAADGIVRTATLD 324
Query: 442 GFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKP 501
+ + M +A+ +F ++L Q ++ +I+G +Q G +A+L F ++ +G+
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQ----SYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 380
Query: 502 STTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVF 561
+++ AC V L G I+G I+ L L + + +DMY KC + +A RVF
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 440
Query: 562 DISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVN 621
D ++ +NA+I+ + +G E L LF ++ + I+PD TF +IL AC+ G +
Sbjct: 441 DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLG 499
Query: 622 EGLELF-----VGMFSDHQVKPSMEHFGC-VVNLLSRCGNLDEALRV 662
G+E+ GM S+ V GC ++++ S+CG ++EA ++
Sbjct: 500 YGMEIHSSIVKSGMASNSSV-------GCSLIDMYSKCGMIEEAEKI 539
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 101/238 (42%), Gaps = 43/238 (18%)
Query: 490 FFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYA 549
+F + L STT + C +L G+ H ++I T ++ L+ +Y
Sbjct: 35 YFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYT 94
Query: 550 KCGNIHQAKRVFDISPSKELPVYNAMISGYA----------------------------- 580
+ A VFD P +++ +N MI+GY+
Sbjct: 95 NSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSG 154
Query: 581 --MHGLAVEALALFKNLQQKGIDPDSITFTNILNACS-----HAGLVNEGLELFVGMFSD 633
+G +++++ +F ++ ++GI+ D TF IL CS G+ G+ + VG +D
Sbjct: 155 YLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTD 214
Query: 634 HQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELA 691
++ +++ ++ E+LRV +P + ++ ++++ CV++N LA
Sbjct: 215 VVAASAL------LDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLA 265
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/638 (34%), Positives = 329/638 (51%), Gaps = 67/638 (10%)
Query: 202 RAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNV------------- 248
R VH V+K GF +F+ + LID Y KCG LE+ R+VFD M RN+
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 249 ------------------VAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSIL 290
WNSM+ G+ Q+ EEA+ F M EG S S+L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 291 SASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIV 350
SA + L+ +++G Q H++ + D +GS++++ YSK G + DA+ VF M +R++V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 351 TWNLLIASYVQSG-----------------QSDVVVASSIVDMYAKCERIDNAKQVFNSI 393
+WN LI + Q+G + D V +S++ A I ++V +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 394 I----LR-DVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQ 448
+ LR D++L N + YA R EA +F M + N+I+ S+I G+
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR----NVIAETSMISGYAMAAS 335
Query: 449 MNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITC 508
A+ MF +M + N+++W LI+G TQN EA+ F + + P+ +
Sbjct: 336 TKAARLMFTKM----AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 391
Query: 509 ALSACTDVASLRNGRAIHGYLIRHDLCLPTP------IVTSLVDMYAKCGNIHQAKRVFD 562
L AC D+A L G H ++++H + + SL+DMY KCG + + VF
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 563 ISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNE 622
++ +NAMI G+A +G EAL LF+ + + G PD IT +L+AC HAG V E
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511
Query: 623 GLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTC 682
G F M D V P +H+ C+V+LL R G L+EA +I MP PD+ I GSLL+ C
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
Query: 683 VKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPG 742
L +Y++E LL++EP N G YV LSN YA G+W +V VR M+++G+ K PG
Sbjct: 572 KVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPG 631
Query: 743 CSWIQIGEELHVFVACDRSHPKTEEIYATLALLGMHVR 780
CSWI+I HVF+ D+SHP+ ++I++ L +L +R
Sbjct: 632 CSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/556 (26%), Positives = 263/556 (47%), Gaps = 93/556 (16%)
Query: 82 YGELLQGCVYKR--DMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLF 139
+ +LL C+ + +Y + +HA ++K+G F+ +++ +L+ Y+KC +L+ ++F
Sbjct: 22 FAKLLDSCIKSKLSAIYV-RYVHASVIKSG--FSNEIFIQNRLIDAYSKCGSLEDGRQVF 78
Query: 140 CRLRVKNVFSWAAIIGLNCRVGL-------------------------------SEKALI 168
++ +N+++W +++ ++G E+AL
Sbjct: 79 DKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALC 138
Query: 169 GFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYG 228
F M ++G + + +VL AC L + G VH + K F V++ S+L+DMY
Sbjct: 139 YFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS 198
Query: 229 KCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTS 288
KCG++ +A++VFD M RNVV+WNS+I + QNG EA+ VF M VEP V++ S
Sbjct: 199 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 258
Query: 289 ILSASANLDALDEGKQAHAVAVING-MELDNVLGSSIINFYSKVGLLEDAEVVFSRMVER 347
++SA A+L A+ G++ H V N + D +L ++ ++ Y+K +++A +F M R
Sbjct: 259 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 348 DIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAA 407
+V+ +S++ YA A+ +F + R+VV WN L+A
Sbjct: 319 ------------------NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 408 YADLGRSGEASRLFYQMQLEGISPNIISWNSVI----------LGF------LRNG---Q 448
Y G + EA LF ++ E + P S+ +++ LG L++G Q
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 449 MNEAKDMFLQMQSLG------------------VQPNLITWTTLISGLTQNSCGNEAILF 490
E D+F+ + ++ + ++W +I G QN GNEA+
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 491 FQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLP-TPIVTSLVDMYA 549
F+EMLE+G KP T+ LSAC + GR + R P T +VD+
Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLG 540
Query: 550 KCGNIHQAKRVFDISP 565
+ G + +AK + + P
Sbjct: 541 RAGFLEEAKSMIEEMP 556
Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 235/493 (47%), Gaps = 62/493 (12%)
Query: 28 THLTKLRESDNSYESLYK----SYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYG 83
T L L E+D+ + S+ + ++ +S ++ + EA+ M F + +
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 84 ELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLR 143
+L C DM G Q+H+ I K+ F + Y+ + LV Y+KC ++ A R+F +
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSP--FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 144 VKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRA 203
+NV SW ++I + G + +AL F M E V PD L +V+ AC +L + G+
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274
Query: 204 VHGYVLKVG-FDGCVFVASSLIDMYGKCGDLEEARKVFDG-------------------- 242
VHG V+K + ++++ +DMY KC ++EAR +FD
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 243 -----------MIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILS 291
M RNVV+WN++I GY QNG NEEA+ +F + E V PT S +IL
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 292 ASANLDALDEGKQAHAVAVINGM------ELDNVLGSSIINFYSKVGLLEDAEVVFSRMV 345
A A+L L G QAH + +G E D +G+S+I+ Y K G +E+ +VF +M+
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 346 ERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLL 405
ERD V+WN +I + Q+G + E ++ +++ S D + +L
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGN--------------EALELFREMLESGEKPDHITMIGVL 500
Query: 406 AAYADLGRSGEASRLFYQMQLE-GISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGV 464
+A G E F M + G++P + ++ R G + EAK M +M +
Sbjct: 501 SACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP---M 557
Query: 465 QPNLITWTTLISG 477
QP+ + W +L++
Sbjct: 558 QPDSVIWGSLLAA 570
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 225/724 (31%), Positives = 402/724 (55%), Gaps = 24/724 (3%)
Query: 50 QISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNG 109
Q+ L ++ EA+ LL M+ + +++ L++ C +KR G ++++ L +
Sbjct: 65 QLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSM 124
Query: 110 DFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIG 169
+ + + + L A +F ++ +N+FSW ++G + G ++A+
Sbjct: 125 SSLGVE--LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCL 182
Query: 170 FVEM-QEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYG 228
+ M GV PD + P VL+ CG + + G+ VH +V++ G++ + V ++LI MY
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYV 242
Query: 229 KCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTS 288
KCGD++ AR +FD M R++++WN+MI GY +NG+ E + +F+ M V+P +++TS
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTS 302
Query: 289 ILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERD 348
++SA L G+ HA + G +D + +S+ Y G +AE +FSRM +D
Sbjct: 303 VISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKD 362
Query: 349 IVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAY 408
IV+W +I+ Y + D +D Y R+ + V I VL + A
Sbjct: 363 IVSWTTMISGYEYNFLPD-----KAIDTY----RMMDQDSVKPDEITVAAVL--SACATL 411
Query: 409 ADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNL 468
DL E +L + +L IS I++ N++I + + +++A D+F + + N+
Sbjct: 412 GDLDTGVELHKLAIKARL--ISYVIVA-NNLINMYSKCKCIDKALDIFHNIP----RKNV 464
Query: 469 ITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGY 528
I+WT++I+GL N+ EA++F ++M T ++P+ T+T AL+AC + +L G+ IH +
Sbjct: 465 ISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAH 523
Query: 529 LIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEA 588
++R + L + +L+DMY +CG ++ A F+ S K++ +N +++GY+ G
Sbjct: 524 VLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMV 582
Query: 589 LALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVN 648
+ LF + + + PD ITF ++L CS + +V +GL F M D+ V P+++H+ CVV+
Sbjct: 583 VELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVD 641
Query: 649 LLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGN 708
LL R G L EA + I MP PD + G+LL+ C ++ +L E ++H+ +L+ + G
Sbjct: 642 LLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGY 701
Query: 709 YVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEI 768
Y+ L N YA G+W EV++VR +MKE GL + GCSW+++ ++H F++ D+ HP+T+EI
Sbjct: 702 YILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEI 761
Query: 769 YATL 772
L
Sbjct: 762 NTVL 765
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/733 (31%), Positives = 369/733 (50%), Gaps = 90/733 (12%)
Query: 99 QQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNC 158
++ +A I+ G + N +V +KL+ YA +++SR+F + +++F W +II +
Sbjct: 44 RKHNALIITGG--LSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHF 101
Query: 159 RVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVG-FDGCV 217
G ++L F M G SPD+F P V+ AC L W G VHG VLK G FD
Sbjct: 102 SNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNT 161
Query: 218 FVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLE 277
V +S + Y KCG L++A VFD M R+VVAW ++I G+VQNG +E + +M
Sbjct: 162 AVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSA 221
Query: 278 GVE---PTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLL 334
G + P ++ A +NL AL EG+ H AV NG+ + SS+ +FYSK G
Sbjct: 222 GSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNP 281
Query: 335 EDAEVVFSRMVERDIVTWNLLIASY----------------------------------- 359
+A + F + + D+ +W +IAS
Sbjct: 282 SEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINEL 341
Query: 360 -----VQSGQS------------DVVVASSIVDMYAKCERIDNAKQVFNSIILR-DVVLW 401
V G++ D V +S++ MY K E + A+++F I + W
Sbjct: 342 GKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAW 401
Query: 402 NTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVI-----LGFLRNGQ-------- 448
NT+L Y + + LF ++Q GI + S SVI +G + G+
Sbjct: 402 NTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVK 461
Query: 449 ---------MNEAKDMFLQMQSLGV--------QPNLITWTTLISGLTQNSCGNEAILFF 491
+N D++ +M L V N+ITW +I+ +AI F
Sbjct: 462 TSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALF 521
Query: 492 QEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKC 551
M+ KPS+ T+ L AC + SL G+ IH Y+ + + + +L+DMYAKC
Sbjct: 522 DRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKC 581
Query: 552 GNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNIL 611
G++ +++ +FD K+ +N MISGY MHG A+ALF +++ + P TF +L
Sbjct: 582 GHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALL 641
Query: 612 NACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPD 671
+AC+HAGLV +G +LF+ M + VKP+++H+ C+V+LLSR GNL+EA +++MP PD
Sbjct: 642 SACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPD 700
Query: 672 AHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDI 731
I G+LLS+C+ E E+ ++E + +P N G Y+ L+N Y+A+G+W E + R++
Sbjct: 701 GVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREM 760
Query: 732 MKEKGLRKNPGCS 744
M+E G+ K G S
Sbjct: 761 MRESGVGKRAGHS 773
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 204/489 (41%), Gaps = 105/489 (21%)
Query: 298 ALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIA 357
+L+ ++ +A+ + G+ + + S +I+ Y+ G + VF + RDI WN +I
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIK 98
Query: 358 SYVQ----------------SGQS------------------------------------ 365
++ SGQS
Sbjct: 99 AHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFD 158
Query: 366 -DVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQM 424
+ V +S V Y+KC + +A VF+ + RDVV W +++ + G S +M
Sbjct: 159 RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218
Query: 425 QLEGISPNIISWNSVILGF-------------------LRNG----------------QM 449
G + + ++ GF ++NG +
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 450 NEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCA 509
+ +L + LG ++ +WT++I+ L ++ E+ F EM G+ P I+C
Sbjct: 279 GNPSEAYLSFRELG-DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCL 337
Query: 510 LSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVF-DISPSKE 568
++ + + G+A HG++IRH L + + SL+ MY K + A+++F IS
Sbjct: 338 INELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGN 397
Query: 569 LPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFV 628
+N M+ GY V+ + LF+ +Q GI+ DS + T+++++CSH G V G L
Sbjct: 398 KEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHC 457
Query: 629 GMFSDHQVKPSMEHFGCVVN----LLSRCGNLDEALRVILTMPCDPDAHII--GSLLSTC 682
+ VK S++ VVN L + G+L A R M C+ D ++I +++++
Sbjct: 458 -----YVVKTSLDLTISVVNSLIDLYGKMGDLTVAWR----MFCEADTNVITWNAMIASY 508
Query: 683 VKSNETELA 691
V ++E A
Sbjct: 509 VHCEQSEKA 517
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 93/225 (41%), Gaps = 11/225 (4%)
Query: 51 ISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGD 110
I+S +Q +A+ L M NF+ LL CV + GQ IH I +
Sbjct: 505 IASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH 564
Query: 111 FFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGF 170
N + L+ YAKC L+ + LF K+ W +I G E A+ F
Sbjct: 565 --EMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALF 622
Query: 171 VEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAV----HGYVLKVGFDGCVFVASSLIDM 226
+M+E V P +L AC G V G+ + H Y +K S L+D+
Sbjct: 623 DQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKH----YSCLVDL 678
Query: 227 YGKCGDLEEARKVFDGM-IARNVVAWNSMIVGYVQNGLNEEAIRV 270
+ G+LEEA M + + V W +++ + +G E IR+
Sbjct: 679 LSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRM 723
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 513 CTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVY 572
C SL + R + +I L + + L+ YA G + + RVF + +++ ++
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 573 NAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACS-----HAGLVNEGLELF 627
N++I + +G +L F ++ G PD T +++AC+ H G GL L
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 628 VGMFS-DHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSN 686
G F + V S +F S+CG L +A V MP D D +++S V++
Sbjct: 154 HGGFDRNTAVGASFVYF------YSKCGFLQDACLVFDEMP-DRDVVAWTAIISGHVQNG 206
Query: 687 ETE 689
E+E
Sbjct: 207 ESE 209
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 362 bits (929), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 219/732 (29%), Positives = 368/732 (50%), Gaps = 91/732 (12%)
Query: 135 ASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGA 194
A LF + ++ S+ +++ R G +++A F+ + G+ D + +VLK
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 195 LGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSM 254
L FGR +H +K GF V V +SL+D Y K + ++ RKVFD M RNVV W ++
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 255 IVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGM 314
I GY +N +N+E + +F M EG +P + + L A G Q H V V NG+
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 315 ELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIA----------------- 357
+ + +S+IN Y K G + A ++F + + +VTWN +I+
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 358 ---SYVQSGQS--------------------------------DVVVASSIVDMYAKCER 382
+YV+ +S D + ++++ Y+KC
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 383 IDNAKQVFNSI-ILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVIL 441
+ +A ++F I + +VV W +++ + EA LF +M+ +G+ PN ++ SVIL
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY-SVIL 404
Query: 442 --------------------------------GFLRNGQMNEAKDMFLQMQSLGVQPNLI 469
+++ G++ EA +F + +++
Sbjct: 405 TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID----DKDIV 460
Query: 470 TWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDV-ASLRNGRAIHGY 528
W+ +++G Q AI F E+ + GIKP+ T + L+ C AS+ G+ HG+
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 520
Query: 529 LIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEA 588
I+ L + ++L+ MYAK GNI A+ VF K+L +N+MISGYA HG A++A
Sbjct: 521 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 580
Query: 589 LALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVN 648
L +FK ++++ + D +TF + AC+HAGLV EG + F M D ++ P+ EH C+V+
Sbjct: 581 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 640
Query: 649 LLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGN 708
L SR G L++A++VI MP + I ++L+ C +TEL +E ++ ++P++
Sbjct: 641 LYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAA 700
Query: 709 YVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEI 768
YV LSN YA SG W E ++VR +M E+ ++K PG SWI++ + + F+A DRSHP ++I
Sbjct: 701 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQI 760
Query: 769 YATLALLGMHVR 780
Y L L ++
Sbjct: 761 YMKLEDLSTRLK 772
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 230/517 (44%), Gaps = 92/517 (17%)
Query: 233 LEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSA 292
L A +FD R+ ++ S++ G+ ++G +EA R+F + G+E +S+L
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 293 SANLDALDE--GKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIV 350
SA L DE G+Q H + G D +G+S+++ Y K +D VF M ER++V
Sbjct: 103 SATL--CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 351 TWNLLIASYVQSGQSDVV------------------------------------------ 368
TW LI+ Y ++ +D V
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 369 ----------VASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEAS 418
V++S++++Y KC + A+ +F+ ++ VV WN++++ YA G EA
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280
Query: 419 RLFYQMQLEGISPNIISWNSVI---------------------LGFLRNGQMNEA----- 452
+FY M+L + + S+ SVI GFL + + A
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 453 ------KDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTI 506
D + +G N+++WT +ISG QN EA+ F EM G++P+ T
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 507 TCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPS 566
+ L+A ++ +H +++ + + + T+L+D Y K G + +A +VF
Sbjct: 401 SVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD 456
Query: 567 KELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLEL 626
K++ ++AM++GYA G A+ +F L + GI P+ TF++ILN C+ +
Sbjct: 457 KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQ 516
Query: 627 FVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVI 663
F G ++ S+ ++ + ++ GN++ A V
Sbjct: 517 FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVF 553
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 154/327 (47%), Gaps = 50/327 (15%)
Query: 382 RIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVI- 440
R+ NA +F+ RD + +LL ++ GR+ EA RLF + G+ + ++SV+
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 441 --------------------LGFL--------------RNGQMNEAKDMFLQMQSLGVQP 466
GFL + + + +F +M+ +
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK----ER 157
Query: 467 NLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIH 526
N++TWTTLISG +NS +E + F M G +P++ T AL + G +H
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 527 GYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAV 586
++++ L P+ SL+++Y KCGN+ +A+ +FD + K + +N+MISGYA +GL +
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 587 EALALFKNLQQKGIDPDSITFTNILNACSHAGLV--NEGLELFV---GMFSDHQVKPSME 641
EAL +F +++ + +F +++ C++ + E L V G D ++ ++
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTAL- 336
Query: 642 HFGCVVNLLSRCGNLDEALRVILTMPC 668
+ S+C + +ALR+ + C
Sbjct: 337 -----MVAYSKCTAMLDALRLFKEIGC 358
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 356 bits (913), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 209/698 (29%), Positives = 351/698 (50%), Gaps = 102/698 (14%)
Query: 178 VSPDNFVLPNV--------LKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGK 229
+S N++ NV L+ C +L + R + V K G F + L+ ++ +
Sbjct: 25 LSERNYIPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCR 81
Query: 230 CGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSI 289
G ++EA +VF+ + ++ V +++M+ G+ + ++A++ F M + VEP + T +
Sbjct: 82 YGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYL 141
Query: 290 LSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDI 349
L + L GK+ H + V +G LD + + N Y+K + +A VF RM ERD+
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL 201
Query: 350 VTWNLLIASYVQSG---------------------------------------------- 363
V+WN ++A Y Q+G
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGY 261
Query: 364 ------QSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEA 417
S V +++++VDMYAKC ++ A+Q+F+ ++ R+VV WN+++ AY EA
Sbjct: 262 AMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEA 321
Query: 418 SRLFYQMQLEGISP-----------------------------------NIISWNSVILG 442
+F +M EG+ P N+ NS+I
Sbjct: 322 MLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 381
Query: 443 FLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPS 502
+ + +++ A MF ++QS L++W +I G QN +A+ +F +M +KP
Sbjct: 382 YCKCKEVDTAASMFGKLQS----RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD 437
Query: 503 TTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFD 562
T T ++A +++ + + IHG ++R L + T+LVDMYAKCG I A+ +FD
Sbjct: 438 TFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFD 497
Query: 563 ISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNE 622
+ + + +NAMI GY HG AL LF+ +Q+ I P+ +TF ++++ACSH+GLV
Sbjct: 498 MMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEA 557
Query: 623 GLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTC 682
GL+ F M ++ ++ SM+H+G +V+LL R G L+EA I+ MP P ++ G++L C
Sbjct: 558 GLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGAC 617
Query: 683 VKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPG 742
AE +E L +L PD+ G +V L+N Y A+ W +V QVR M +GLRK PG
Sbjct: 618 QIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPG 677
Query: 743 CSWIQIGEELHVFVACDRSHPKTEEIYATLALLGMHVR 780
CS ++I E+H F + +HP +++IYA L L H++
Sbjct: 678 CSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 355 bits (910), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 204/607 (33%), Positives = 321/607 (52%), Gaps = 54/607 (8%)
Query: 202 RAVHGYVLKVGFDGCVFVASSLID---MYGKCGDLEEARKVFDGMIARNVVAWNSMIVGY 258
R +H ++K+G + S LI+ + L A VF + N++ WN+M G+
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 259 VQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDN 318
+ A++++ M G+ P + +L + A A EG+Q H + G +LD
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 319 VLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYA 378
+ +S+I+ Y + G LEDA VF + RD+V++ LI Y G
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY-------------- 215
Query: 379 KCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNS 438
I+NA+++F+ I ++DVV WN +++ YA+ G EA LF M + P+ + +
Sbjct: 216 ----IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVT 271
Query: 439 VILGFLRNGQMNEAKDMFLQMQSLGVQPNL------------------------------ 468
V+ ++G + + + L + G NL
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 331
Query: 469 -ITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHG 527
I+W TLI G T + EA+L FQEML +G P+ T+ L AC + ++ GR IH
Sbjct: 332 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 391
Query: 528 YLIRH--DLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLA 585
Y+ + + + + TSL+DMYAKCG+I A +VF+ K L +NAMI G+AMHG A
Sbjct: 392 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 451
Query: 586 VEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGC 645
+ LF +++ GI PD ITF +L+ACSH+G+++ G +F M D+++ P +EH+GC
Sbjct: 452 DASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGC 511
Query: 646 VVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDN 705
+++LL G EA +I M +PD I SLL C EL E +E+L+++EP+N
Sbjct: 512 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 571
Query: 706 PGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKT 765
PG+YV LSN YA++GRWNEV++ R ++ +KG++K PGCS I+I +H F+ D+ HP+
Sbjct: 572 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 631
Query: 766 EEIYATL 772
EIY L
Sbjct: 632 REIYGML 638
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 222/480 (46%), Gaps = 94/480 (19%)
Query: 85 LLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVF---YAKCDALDVASRLFCR 141
LL C + + + + IHA+++K G Y +KL+ F + L A +F
Sbjct: 39 LLHNC---KTLQSLRIIHAQMIKIG--LHNTNYALSKLIEFCILSPHFEGLPYAISVFKT 93
Query: 142 LRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFG 201
++ N+ W + + AL +V M G+ P+++ P VLK+C G
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 202 RAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFD-------------------- 241
+ +HG+VLK+G D ++V +SLI MY + G LE+A KVFD
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 242 GMI-----------ARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSIL 290
G I ++VV+WN+MI GY + G +EA+ +F +M V P ++ +++
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 291 SASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIV 350
SA A +++ G+Q H +G + + +++I+ YSK G LE A +F R+ +D++
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 351 TWNLLIASY----------------VQSGQS--DVVVAS--------------------- 371
+WN LI Y ++SG++ DV + S
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 372 ---------------SIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGE 416
S++DMYAKC I+ A QVFNSI+ + + WN ++ +A GR+
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453
Query: 417 ASRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQM-QSLGVQPNLITWTTLI 475
+ LF +M+ GI P+ I++ ++ +G ++ + +F M Q + P L + +I
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 177/326 (54%), Gaps = 20/326 (6%)
Query: 71 KCRNFQIGPEIYGELLQ-GCVYKRDMYTGQQIHARILKNGDF------FARNEYVE---- 119
K + F+ G +I+G +L+ GC D+Y + + ++NG F ++ + +
Sbjct: 146 KSKAFKEGQQIHGHVLKLGC--DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 120 TKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVS 179
T L+ YA ++ A +LF + VK+V SW A+I G ++AL F +M + V
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 180 PDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKV 239
PD + V+ AC G + GR VH ++ GF + + ++LID+Y KCG+LE A +
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 240 FDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDAL 299
F+ + ++V++WN++I GY L +EA+ +F EM G P V++ SIL A A+L A+
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 300 DEGKQAHAV--AVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIA 357
D G+ H + G+ + L +S+I+ Y+K G +E A VF+ ++ + + +WN +I
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443
Query: 358 SYVQSGQSDVVVASSIVDMYAKCERI 383
+ G++D + D++++ +I
Sbjct: 444 GFAMHGRAD-----ASFDLFSRMRKI 464
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 139/261 (53%), Gaps = 4/261 (1%)
Query: 46 SYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARI 105
S+ IS ++ +EA++L +M N + ++ C + G+Q+H I
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 106 LKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEK 165
+G F N + L+ Y+KC L+ A LF RL K+V SW +IG + L ++
Sbjct: 293 DDHG--FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKE 350
Query: 166 ALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLK--VGFDGCVFVASSL 223
AL+ F EM G +P++ + ++L AC LG + GR +H Y+ K G + +SL
Sbjct: 351 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 410
Query: 224 IDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTR 283
IDMY KCGD+E A +VF+ ++ +++ +WN+MI G+ +G + + +F M G++P
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
Query: 284 VSVTSILSASANLDALDEGKQ 304
++ +LSA ++ LD G+
Sbjct: 471 ITFVGLLSACSHSGMLDLGRH 491
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 353 bits (905), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 212/660 (32%), Positives = 331/660 (50%), Gaps = 98/660 (14%)
Query: 201 GRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQ 260
GRAVHG +++ G C+ A+ L++ Y KCG L +A +F+ +I ++VV+WNS+I GY Q
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 261 NG---LNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELD 317
NG + +++F EM + + P ++ I A ++L + G+QAHA+ V D
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 318 NVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTW--------------------NLLIA 357
+ +S++ Y K GL+ED VF+ M ER+ TW NL +
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 358 SYVQSGQSD----------------------------------VVVASSIVDMYAKCERI 383
+ SD V +++++V MY+KCE +
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 384 DNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVI--- 440
+ A ++F+S R+ + W+ ++ Y+ G S EA +LF +M GI P+ + V+
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 441 ------------------LGFLRN--------------GQMNEAKDMFLQMQSLGVQPNL 468
LGF R+ G + +A+ F +Q + ++
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ----ERDV 388
Query: 469 ITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGY 528
WT+LISG QNS EA++ ++ M GI P+ T+ L AC+ +A+L G+ +HG+
Sbjct: 389 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGH 448
Query: 529 LIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEA 588
I+H L PI ++L MY+KCG++ VF +P+K++ +NAMISG + +G EA
Sbjct: 449 TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEA 508
Query: 589 LALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDH-QVKPSMEHFGCVV 647
L LF+ + +G++PD +TF NI++ACSH G V G + M SD + P ++H+ C+V
Sbjct: 509 LELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGW-FYFNMMSDQIGLDPKVDHYACMV 567
Query: 648 NLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPG 707
+LLSR G L EA I + D + LLS C + EL Y E L+ L
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS 627
Query: 708 NYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEE 767
YV LS Y A GR +V +V M+ G+ K GCSWI++ + HVFV D HP EE
Sbjct: 628 TYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEE 687
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 3/192 (1%)
Query: 51 ISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGD 110
IS + EA+ L MK +L+ C + G+Q+H +K+G
Sbjct: 395 ISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHG- 453
Query: 111 FFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGF 170
F + + L Y+KC +L+ + +F R K+V SW A+I G ++AL F
Sbjct: 454 -FGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512
Query: 171 VEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVL-KVGFDGCVFVASSLIDMYGK 229
EM +G+ PD+ N++ AC G+V G + ++G D V + ++D+ +
Sbjct: 513 EEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSR 572
Query: 230 CGDLEEARKVFD 241
G L+EA++ +
Sbjct: 573 AGQLKEAKEFIE 584
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 14/181 (7%)
Query: 495 LETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNI 554
+T + P T+T+ L+ + +L GRA+HG +IR LV+ YAKCG +
Sbjct: 6 FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 555 HQAKRVFDISPSKELPVYNAMISGYAMHG---LAVEALALFKNLQQKGIDPDSITFTNIL 611
+A +F+ K++ +N++I+GY+ +G + + LF+ ++ + I P++ T I
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125
Query: 612 NA-----CSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTM 666
A S G L + + F D V S+ V + + G +++ L+V M
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSL------VGMYCKAGLVEDGLKVFAYM 179
Query: 667 P 667
P
Sbjct: 180 P 180
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 235/743 (31%), Positives = 391/743 (52%), Gaps = 34/743 (4%)
Query: 51 ISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQ-GC-VYKRDMYTGQQIHARILKN 108
IS S+ R A + + M+ + +G L+ C + + D+ +QI I K+
Sbjct: 178 ISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKS 237
Query: 109 GDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALI 168
G + +V + LV +AK +L A ++F ++ +N + ++ R E+A
Sbjct: 238 G--LLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295
Query: 169 GFVEMQED-GVSPDNFV-LPNVLKACGALGWVGF--GRAVHGYVLKVGF-DGCVFVASSL 223
F++M VSP+++V L + VG GR VHG+V+ G D V + + L
Sbjct: 296 LFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGL 355
Query: 224 IDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTR 283
++MY KCG + +AR+VF M ++ V+WNSMI G QNG EA+ + M + P
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGS 415
Query: 284 VSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSR 343
++ S LS+ A+L G+Q H ++ G++L+ + ++++ Y++ G L + +FS
Sbjct: 416 FTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSS 475
Query: 344 MVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNT 403
M E D V+WN +I + +S +S + ++V + +R A Q N I V+
Sbjct: 476 MPEHDQVSWNSIIGALARSERS---LPEAVV-CFLNAQR---AGQKLNRITFSSVLS-AV 527
Query: 404 LLAAYADLGRSGEASRLFYQMQLE-GISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSL 462
++ +LG+ + + L+ I+ + N++I + + G+M+ + +F +M
Sbjct: 528 SSLSFGELGKQ------IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAE- 580
Query: 463 GVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNG 522
+ + +TW ++ISG N +A+ ML+TG + + LSA VA+L G
Sbjct: 581 --RRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERG 638
Query: 523 RAIHGYLIRHDLCLPTPIV--TSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYA 580
+H +R CL + +V ++LVDMY+KCG + A R F+ P + +N+MISGYA
Sbjct: 639 MEVHACSVR--ACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYA 696
Query: 581 MHGLAVEALALFKNLQQKG-IDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPS 639
HG EAL LF+ ++ G PD +TF +L+ACSHAGL+ EG + F M + + P
Sbjct: 697 RHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPR 756
Query: 640 MEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSN--ETELAEYISEH 697
+EHF C+ ++L R G LD+ I MP P+ I ++L C ++N + EL + +E
Sbjct: 757 IEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEM 816
Query: 698 LLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVA 757
L QLEP+N NYV L N YAA GRW ++ + R MK+ ++K G SW+ + + +H+FVA
Sbjct: 817 LFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVA 876
Query: 758 CDRSHPKTEEIYATLALLGMHVR 780
D+SHP + IY L L +R
Sbjct: 877 GDKSHPDADVIYKKLKELNRKMR 899
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 179/737 (24%), Positives = 325/737 (44%), Gaps = 118/737 (16%)
Query: 85 LLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRV 144
+Q CV R + H+R+ KN ++ Y+ L+ Y + A ++F + +
Sbjct: 9 FVQSCVGHRG--AARFFHSRLYKNR--LDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 145 KNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVG--FGR 202
+N SWA I+ R G ++AL+ +M ++G+ + + +VL+AC +G VG FGR
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 203 AVHGYVLKVGFDGCVFVASSLIDMYGKC-GDLEEARKVFDGMIARNVVAWNSMIVGYVQN 261
+HG + K+ + V++ LI MY KC G + A F + +N V+WNS+I Y Q
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 262 GLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVI--NGMELDNV 319
G A R+F M +G PT + S+++ + +L D + I +G+ D
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 320 LGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQ------------------ 361
+GS +++ ++K G L A VF++M R+ VT N L+ V+
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMI 304
Query: 362 --SGQSDVVVASS-------------------------------------IVDMYAKCER 382
S +S V++ SS +V+MYAKC
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 383 IDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISP----------- 431
I +A++VF + +D V WN+++ G EA + M+ I P
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 432 ------------------------NIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPN 467
N+ N+++ + G +NE + +F M + +
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP----EHD 480
Query: 468 LITWTTLISGLTQNSCG-NEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIH 526
++W ++I L ++ EA++ F G K + T + LSA + ++ G+ IH
Sbjct: 481 QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 527 GYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFD-ISPSKELPVYNAMISGYAMHGLA 585
G +++++ +L+ Y KCG + +++F ++ ++ +N+MISGY + L
Sbjct: 541 GLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELL 600
Query: 586 VEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEH--- 642
+AL L + Q G DS + +L+A + + G+E+ V+ +E
Sbjct: 601 AKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHAC-----SVRACLESDVV 655
Query: 643 -FGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQL 701
+V++ S+CG LD ALR TMP +++ S++S + + E A + E ++L
Sbjct: 656 VGSALVDMYSKCGRLDYALRFFNTMPV-RNSYSWNSMISGYARHGQGEEALKLFE-TMKL 713
Query: 702 EPDNPGNYVALSNAYAA 718
+ P ++V +A
Sbjct: 714 DGQTPPDHVTFVGVLSA 730
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 243/504 (48%), Gaps = 47/504 (9%)
Query: 182 NFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFD 241
N V + +++C +G G R H + K D V++ ++LI+ Y + GD ARKVFD
Sbjct: 3 NCVPLSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFD 60
Query: 242 GMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALD- 300
M RN V+W ++ GY +NG ++EA+ +M EG+ + + S+L A + ++
Sbjct: 61 EMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGI 120
Query: 301 -EGKQAHAVAVINGMELDNVLGSSIINFYSK-VGLLEDAEVVFSRMVERDIVTWNLLIAS 358
G+Q H + +D V+ + +I+ Y K +G + A F + ++ V+WN +I+
Sbjct: 121 LFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISV 180
Query: 359 YVQSG--QSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGE 416
Y Q+G +S + SS+ + + + F S++ L +
Sbjct: 181 YSQAGDQRSAFRIFSSM-----QYDGSRPTEYTFGSLVTTACSL-------------TEP 222
Query: 417 ASRLFYQ----MQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWT 472
RL Q +Q G+ ++ + ++ F ++G ++ A+ +F QM++ N +T
Sbjct: 223 DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMET----RNAVTLN 278
Query: 473 TLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVA-----SLRNGRAIHG 527
L+ GL + G EA F +M + I S + LS+ + + L+ GR +HG
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHG 337
Query: 528 YLIRHDLC-LPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAV 586
++I L I LV+MYAKCG+I A+RVF K+ +N+MI+G +G +
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFI 397
Query: 587 EALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELF---VGMFSDHQVKPSMEHF 643
EA+ +K++++ I P S T + L++C+ G ++ + + D V S
Sbjct: 398 EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVS---- 453
Query: 644 GCVVNLLSRCGNLDEALRVILTMP 667
++ L + G L+E ++ +MP
Sbjct: 454 NALMTLYAETGYLNECRKIFSSMP 477
Score = 139 bits (351), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 204/438 (46%), Gaps = 31/438 (7%)
Query: 46 SYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARI 105
S+ I+ L + EAV+ M+ + G L C + GQQIH
Sbjct: 382 SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGES 441
Query: 106 LKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLS-E 164
LK G N V L+ YA+ L+ ++F + + SW +IIG R S
Sbjct: 442 LKLG--IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLP 499
Query: 165 KALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLI 224
+A++ F+ Q G + +VL A +L + G+ +HG LK ++LI
Sbjct: 500 EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALI 559
Query: 225 DMYGKCGDLEEARKVFDGMIA-RNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTR 283
YGKCG+++ K+F M R+ V WNSMI GY+ N L +A+ + + M G
Sbjct: 560 ACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDS 619
Query: 284 VSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSR 343
++LSA A++ L+ G + HA +V +E D V+GS++++ YSK G L+ A F+
Sbjct: 620 FMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNT 679
Query: 344 MVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILR-----DV 398
M R+ +WN +I+ Y + GQ + A ++F ++ L D
Sbjct: 680 MPVRNSYSWNSMISGYARHGQG------------------EEALKLFETMKLDGQTPPDH 721
Query: 399 VLWNTLLAAYADLGRSGEASRLFYQMQLE-GISPNIISWNSVILGFLRNGQMNEAKDMFL 457
V + +L+A + G E + F M G++P I ++ + R G++++ +D
Sbjct: 722 VTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIE 781
Query: 458 QMQSLGVQPNLITWTTLI 475
+M ++PN++ W T++
Sbjct: 782 KMP---MKPNVLIWRTVL 796
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 348 bits (893), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/575 (33%), Positives = 324/575 (56%), Gaps = 37/575 (6%)
Query: 223 LIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPT 282
+I Y + +L +AR++F+ M R+V +WN+M+ GY QNG ++A VF M E
Sbjct: 132 MIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP----EKN 187
Query: 283 RVSVTSILSASANLDALDEG----KQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAE 338
VS ++LSA ++E K A+++ + +LG F K ++E A
Sbjct: 188 DVSWNALLSAYVQNSKMEEACMLFKSRENWALVS---WNCLLGG----FVKKKKIVE-AR 239
Query: 339 VVFSRMVERDIVTWNLLIASYVQSGQ-------------SDVVVASSIVDMYAKCERIDN 385
F M RD+V+WN +I Y QSG+ DV +++V Y + ++
Sbjct: 240 QFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEE 299
Query: 386 AKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLR 445
A+++F+ + R+ V WN +LA Y R A LF M N+ +WN++I G+ +
Sbjct: 300 ARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQ 355
Query: 446 NGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTT 505
G+++EAK++F +M + + ++W +I+G +Q+ EA+ F +M G + + ++
Sbjct: 356 CGKISEAKNLFDKMP----KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSS 411
Query: 506 ITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISP 565
+ ALS C DV +L G+ +HG L++ + +L+ MY KCG+I +A +F
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 566 SKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLE 625
K++ +N MI+GY+ HG AL F++++++G+ PD T +L+ACSH GLV++G +
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 626 LFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKS 685
F M D+ V P+ +H+ C+V+LL R G L++A ++ MP +PDA I G+LL
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Query: 686 NETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSW 745
TELAE ++ + +EP+N G YV LSN YA+SGRW +V ++R M++KG++K PG SW
Sbjct: 592 GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSW 651
Query: 746 IQIGEELHVFVACDRSHPKTEEIYATLALLGMHVR 780
I+I + H F D HP+ +EI+A L L + ++
Sbjct: 652 IEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMK 686
Score = 142 bits (359), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 188/382 (49%), Gaps = 29/382 (7%)
Query: 51 ISSLSKEKQIREAVDLLTEMKCRNFQIGPEI-YGELLQGCVYKRDMYTGQQIHARILKNG 109
+S + + + EA +L +M RN E+ + +L G V M +++ +
Sbjct: 288 VSGYIQNRMVEEARELFDKMPERN-----EVSWNAMLAGYVQGERMEMAKELFDVMP--- 339
Query: 110 DFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIG 169
RN ++ YA+C + A LF ++ ++ SWAA+I + G S +AL
Sbjct: 340 ---CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRL 396
Query: 170 FVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGK 229
FV+M+ +G + + L C + + G+ +HG ++K G++ FV ++L+ MY K
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456
Query: 230 CGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSI 289
CG +EEA +F M +++V+WN+MI GY ++G E A+R F M EG++P ++ ++
Sbjct: 457 CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 290 LSASANLDALDEGKQA-HAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRM-VER 347
LSA ++ +D+G+Q + + G+ ++ + +++ + GLLEDA + M E
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576
Query: 348 DIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAA 407
D W L+ + G ++ +A + D E ++ V S +
Sbjct: 577 DAAIWGTLLGASRVHGNTE--LAETAADKIFAMEPENSGMYVLLSNL------------- 621
Query: 408 YADLGRSGEASRLFYQMQLEGI 429
YA GR G+ +L +M+ +G+
Sbjct: 622 YASSGRWGDVGKLRVRMRDKGV 643
Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 194/498 (38%), Gaps = 125/498 (25%)
Query: 46 SYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARI 105
SY IS + + A L EM R+ + +++G V R++ +++ I
Sbjct: 97 SYNGMISGYLRNGEFELARKLFDEMPERDLVS----WNVMIKGYVRNRNLGKARELF-EI 151
Query: 106 LKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEK 165
+ D + N ++ YA+ +D A +F R+ KN SW A++ + E+
Sbjct: 152 MPERDVCSWN-----TMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEE 206
Query: 166 ALIGFVEMQEDGVSPDNFVLPNVLK------------ACGALGWVGFGRAVHGYVLKVGF 213
A + F + + N +L +K + V + + GY
Sbjct: 207 ACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKI 266
Query: 214 DGC-----------VFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNG 262
D VF ++++ Y + +EEAR++FD M RN V+WN+M+ GYVQ
Sbjct: 267 DEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGE 326
Query: 263 LNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGS 322
E A +F V P R V+ N M
Sbjct: 327 RMEMAKELF------DVMPCR-----------------------NVSTWNTM-------- 349
Query: 323 SIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQS----------------- 365
I Y++ G + +A+ +F +M +RD V+W +IA Y QSG S
Sbjct: 350 --ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 366 -------------DVV----------------------VASSIVDMYAKCERIDNAKQVF 390
DVV V ++++ MY KC I+ A +F
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 391 NSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQMN 450
+ +D+V WNT++A Y+ G A R F M+ EG+ P+ + +V+ G ++
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 451 EAKDMFLQM-QSLGVQPN 467
+ + F M Q GV PN
Sbjct: 528 KGRQYFYTMTQDYGVMPN 545
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 161/350 (46%), Gaps = 65/350 (18%)
Query: 348 DIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAA 407
DI WN+ I+SY+++G R + A +VF + V +N +++
Sbjct: 63 DIKEWNVAISSYMRTG------------------RCNEALRVFKRMPRWSSVSYNGMISG 104
Query: 408 YADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPN 467
Y G A +LF +M +++SWN +I G++RN + +A+++F M + +
Sbjct: 105 YLRNGEFELARKLFDEMP----ERDLVSWNVMIKGYVRNRNLGKARELFEIMP----ERD 156
Query: 468 LITWTTLISGLTQNSCGNEAILFFQEMLETG-----------IKPSTTTITCALSACTDV 516
+ +W T++SG QN C ++A F M E ++ S C L +
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN 216
Query: 517 ASLRNGRAIHGYLIRHDLCLPT----------PIVT--SLVDMYAKCGNIHQAKRVFDIS 564
+L + + G ++ + +V+ +++ YA+ G I +A+++FD S
Sbjct: 217 WALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDES 276
Query: 565 PSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVN-EG 623
P +++ + AM+SGY + + EA LF + ++ + +++ +L AG V E
Sbjct: 277 PVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAML-----AGYVQGER 327
Query: 624 LELFVGMFSDHQVKP--SMEHFGCVVNLLSRCGNLDEALRVILTMPC-DP 670
+E+ +F V P ++ + ++ ++CG + EA + MP DP
Sbjct: 328 MEMAKELFD---VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 190/562 (33%), Positives = 324/562 (57%), Gaps = 38/562 (6%)
Query: 214 DGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYE 273
D + + L+ Y K G+++EARKVFD M RNVV+W +++ GYV NG + A +F++
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 274 MTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGM-ELDNVLGSSIINFYSKVG 332
M E +VS T +L + L +G+ A + + + DN+ +S+I+ K G
Sbjct: 136 MP----EKNKVSWTVML-----IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEG 186
Query: 333 LLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNS 392
+++A +F M ER ++TW ++ Y Q+ R+D+A+++F+
Sbjct: 187 RVDEAREIFDEMSERSVITWTTMVTGYGQNN------------------RVDDARKIFDV 228
Query: 393 IILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEA 452
+ + V W ++L Y GR +A LF M ++ + I+ N++I G + G++ +A
Sbjct: 229 MPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV----IACNAMISGLGQKGEIAKA 284
Query: 453 KDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSA 512
+ +F M+ + N +W T+I +N EA+ F M + G++P+ T+ LS
Sbjct: 285 RRVFDSMK----ERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 513 CTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVY 572
C +ASL +G+ +H L+R + + + L+ MY KCG + ++K +FD PSK++ ++
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW 400
Query: 573 NAMISGYAMHGLAVEALALFKNLQQKG-IDPDSITFTNILNACSHAGLVNEGLELFVGMF 631
N++ISGYA HGL EAL +F + G P+ +TF L+ACS+AG+V EGL+++ M
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460
Query: 632 SDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELA 691
S VKP H+ C+V++L R G +EA+ +I +M +PDA + GSLL C ++ ++A
Sbjct: 461 SVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA 520
Query: 692 EYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEE 751
E+ ++ L+++EP+N G Y+ LSN YA+ GRW +V+++R +MK + +RK+PGCSW ++ +
Sbjct: 521 EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENK 580
Query: 752 LHVFVACD-RSHPKTEEIYATL 772
+H F SHP+ E I L
Sbjct: 581 VHAFTRGGINSHPEQESILKIL 602
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 132/236 (55%), Gaps = 3/236 (1%)
Query: 135 ASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGA 194
A R+F ++ +N SW +I ++ R G +AL F+ MQ+ GV P L ++L C +
Sbjct: 284 ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCAS 343
Query: 195 LGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSM 254
L + G+ VH +++ FD V+VAS L+ MY KCG+L +++ +FD +++++ WNS+
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSI 403
Query: 255 IVGYVQNGLNEEAIRVFYEMTLEG-VEPTRVSVTSILSASANLDALDEG-KQAHAVAVIN 312
I GY +GL EEA++VF EM L G +P V+ + LSA + ++EG K ++ +
Sbjct: 404 ISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVF 463
Query: 313 GMELDNVLGSSIINFYSKVGLLEDA-EVVFSRMVERDIVTWNLLIASYVQSGQSDV 367
G++ + +++ + G +A E++ S VE D W L+ + Q DV
Sbjct: 464 GVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDV 519
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 145/594 (24%), Positives = 239/594 (40%), Gaps = 131/594 (22%)
Query: 14 FSHTKPQKPLKLSQTHLTKL--------------RESDNSYESLYKSYFHQISSLSKEKQ 59
+S T P + THL+++ +S +S+ S+ YF +
Sbjct: 11 YSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMP------ 64
Query: 60 IREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFA-RNEYV 118
R+A L EM RN + L+ G M G+ AR K D RN
Sbjct: 65 -RDARKLFDEMPDRNIIS----WNGLVSGY-----MKNGEIDEAR--KVFDLMPERNVVS 112
Query: 119 ETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAII------------------------ 154
T LV Y +DVA LF ++ KN SW ++
Sbjct: 113 WTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDN 172
Query: 155 --------GLNCRVGLSEKALIGFVEMQE----------DGVSPDNFV-----LPNVLKA 191
GL C+ G ++A F EM E G +N V + +V+
Sbjct: 173 IARTSMIHGL-CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE 231
Query: 192 CGALGWVGFGRAVHGYVLKVGFDGC-----------VFVASSLIDMYGKCGDLEEARKVF 240
+ W + GYV + V +++I G+ G++ +AR+VF
Sbjct: 232 KTEVSWTSM---LMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVF 288
Query: 241 DGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALD 300
D M RN +W ++I + +NG EA+ +F M +GV PT ++ SILS A+L +L
Sbjct: 289 DSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLH 348
Query: 301 EGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYV 360
GKQ HA V ++D + S ++ Y K G L ++++F R +DI+ WN +I+ Y
Sbjct: 349 HGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYA 408
Query: 361 QSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILR-----DVVLWNTLLAAYADLGRSG 415
G + A +VF + L + V + L+A + G
Sbjct: 409 SHGLG------------------EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVE 450
Query: 416 EASRLFYQMQ-LEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTL 474
E +++ M+ + G+ P + ++ R G+ NEA +M + S+ V+P+ W +L
Sbjct: 451 EGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEM---IDSMTVEPDAAVWGSL 507
Query: 475 ISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALS-------ACTDVASLRN 521
+ +S + A ++++E I+P + LS DVA LR
Sbjct: 508 LGACRTHSQLDVAEFCAKKLIE--IEPENSGTYILLSNMYASQGRWADVAELRK 559
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 95/227 (41%), Gaps = 36/227 (15%)
Query: 536 LPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNL 595
+P P + ++ G IH+A+++FD SK + +N+M++GY + + +A LF +
Sbjct: 15 IPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM 74
Query: 596 QQKGI---------------------------DPDSITFTNILNACSHAGLVNEGLELFV 628
+ I + + +++T ++ H G V+ LF
Sbjct: 75 PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFW 134
Query: 629 GMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNET 688
M ++V ++ G + + G +D+A ++ +P D D S++ K
Sbjct: 135 KMPEKNKVSWTVMLIGFLQD-----GRIDDACKLYEMIP-DKDNIARTSMIHGLCKEGRV 188
Query: 689 ELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEK 735
+ A I + ++ + + + Y + R ++ ++ D+M EK
Sbjct: 189 DEAREIFD---EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK 232
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2
SV=1
Length = 627
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/581 (35%), Positives = 335/581 (57%), Gaps = 45/581 (7%)
Query: 223 LIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPT 282
LI K G + EARK+FDG+ R+VV W +I GY++ G EA +F +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVD------- 104
Query: 283 RVSVTSILSASANLDALDEGKQ-AHAVAVINGMELDNVLG-SSIINFYSKVGLLEDAEVV 340
S ++++ +A + KQ + A + M NV+ +++I+ Y++ G ++ A +
Sbjct: 105 --SRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALEL 162
Query: 341 FSRMVERDIVTWNLLIASYVQSGQ-------------SDVVVASSIVDMYAKCERIDNAK 387
F M ER+IV+WN ++ + VQ G+ DVV +++VD AK ++D A+
Sbjct: 163 FDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEAR 222
Query: 388 QVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNG 447
++F+ + R+++ WN ++ YA R EA +LF M + SWN++I GF+RN
Sbjct: 223 RLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMP----ERDFASWNTMITGFIRNR 278
Query: 448 QMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETG-IKPSTTTI 506
+MN+A +F +M + N+I+WTT+I+G +N EA+ F +ML G +KP+ T
Sbjct: 279 EMNKACGLFDRMP----EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTY 334
Query: 507 TCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTS-LVDMYAKCGNIHQAKRVFD--I 563
LSAC+D+A L G+ IH LI + IVTS L++MY+K G + A+++FD +
Sbjct: 335 VSILSACSDLAGLVEGQQIH-QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGL 393
Query: 564 SPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEG 623
++L +N+MI+ YA HG EA+ ++ +++ G P ++T+ N+L ACSHAGLV +G
Sbjct: 394 VCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
Query: 624 LELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHI----IGSLL 679
+E F + D + EH+ C+V+L R G L + I CD DA + G++L
Sbjct: 454 MEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFI---NCD-DARLSRSFYGAIL 509
Query: 680 STCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRK 739
S C NE +A+ + + +L+ D+ G YV +SN YAA+G+ E +++R MKEKGL+K
Sbjct: 510 SACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKK 569
Query: 740 NPGCSWIQIGEELHVFVACDRSHPKTEEIYATLALLGMHVR 780
PGCSW+++G++ H+FV D+SHP+ E + + L+ L +R
Sbjct: 570 QPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMR 610
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 210/474 (44%), Gaps = 63/474 (13%)
Query: 346 ERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLL 405
+R + +NL+ + Y S + V ++ K +I A+++F+ + RDVV W ++
Sbjct: 25 DRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVI 84
Query: 406 AAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQ 465
Y LG EA LF ++ N+++W +++ G+LR+ Q++ A+ +F +M +
Sbjct: 85 TGYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMP----E 137
Query: 466 PNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAI 525
N+++W T+I G Q+ ++A+ F EM E I + + A + +
Sbjct: 138 RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNL 193
Query: 526 HGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLA 585
+ R D+ T++VD AK G + +A+R+FD P + + +NAMI+GYA +
Sbjct: 194 FERMPRRDVV----SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRI 249
Query: 586 VEALALFKNLQQKGI---------------------------DPDSITFTNILNACSHAG 618
EA LF+ + ++ + + I++T ++
Sbjct: 250 DEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENK 309
Query: 619 LVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNL-----DEALRVILTMPCDPDAH 673
E L +F M D VKP++ G V++LS C +L + + +++
Sbjct: 310 ENEEALNVFSKMLRDGSVKPNV---GTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNE 366
Query: 674 IIGS-LLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIM 732
I+ S LL+ KS E A + ++ L + D ++ ++ YA G E ++ + M
Sbjct: 367 IVTSALLNMYSKSGELIAARKMFDNGLVCQRD-LISWNSMIAVYAHHGHGKEAIEMYNQM 425
Query: 733 KEKGLRKNP--------GCS---WIQIGEELHVFVACDRSHPKTEEIYATLALL 775
++ G + + CS ++ G E + D S P EE Y L L
Sbjct: 426 RKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDL 479
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 195/433 (45%), Gaps = 55/433 (12%)
Query: 51 ISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGD 110
I L K +I EA L + R+ + ++ G + DM +++ R+
Sbjct: 53 IGELCKVGKIAEARKLFDGLPERDVVT----WTHVITGYIKLGDMREARELFDRVDSR-- 106
Query: 111 FFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGF 170
+N T +V Y + L +A LF + +NV SW +I + G +KAL F
Sbjct: 107 ---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 171 VEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKC 230
EM E + N +++KA G + A++ + D V ++++D K
Sbjct: 164 DEMPERNIVSWN----SMVKALVQRGRID--EAMNLFERMPRRD--VVSWTAMVDGLAKN 215
Query: 231 GDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSIL 290
G ++EAR++FD M RN+++WN+MI GY QN +EA ++F M +T +
Sbjct: 216 GKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFI 275
Query: 291 SASANLDALDEGKQAHAVAVINGMELDNVLG-SSIINFYSKVGLLEDAEVVFSRMVERDI 349
+ A + + M NV+ +++I Y + E+A VFS+M+
Sbjct: 276 RNR---------EMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGS 326
Query: 350 VTWNL------------------------LIASYVQSGQSDVVVASSIVDMYAKCERIDN 385
V N+ LI+ V Q + +V S++++MY+K +
Sbjct: 327 VKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH--QKNEIVTSALLNMYSKSGELIA 384
Query: 386 AKQVFNS--IILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGF 443
A+++F++ + RD++ WN+++A YA G EA ++ QM+ G P+ +++ +++
Sbjct: 385 ARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFAC 444
Query: 444 LRNGQMNEAKDMF 456
G + + + F
Sbjct: 445 SHAGLVEKGMEFF 457
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 7/160 (4%)
Query: 46 SYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEI--YGELLQGCVYKRDMYTGQQIHA 103
S+ I+ + K+ EA+++ ++M R+ + P + Y +L C + GQQIH
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKM-LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQ 355
Query: 104 RILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRV--KNVFSWAAIIGLNCRVG 161
I K+ +NE V + L+ Y+K L A ++F V +++ SW ++I + G
Sbjct: 356 LISKS--VHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHG 413
Query: 162 LSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFG 201
++A+ + +M++ G P N+L AC G V G
Sbjct: 414 HGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
>sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630
OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1
Length = 731
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 214/688 (31%), Positives = 360/688 (52%), Gaps = 57/688 (8%)
Query: 99 QQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLF---CRLRVKNVFSWAAIIG 155
+Q+HA++L + DF R+ + L+ YA+ L A +F + + ++ W +I+
Sbjct: 73 RQVHAQVLLS-DFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILK 131
Query: 156 LNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDG 215
N GL E AL + M++ G++ D ++LP +L+AC LG G RA H V+++G
Sbjct: 132 ANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKE 191
Query: 216 CVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMT 275
+ V + L+ +Y K G + +A +F M RN ++WN MI G+ Q E A+++F M
Sbjct: 192 NLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQ 251
Query: 276 LEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLE 335
E +P V+ TS+LS + ++ V+ L + G+++ E
Sbjct: 252 REEFKPDEVTWTSVLSCHSQCGKFED--------VLKYFHLMRMSGNAVSG--------E 295
Query: 336 DAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIIL 395
V FS E + ++ + YV G + + S
Sbjct: 296 ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSR----------------------- 332
Query: 396 RDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDM 455
N L+ Y G+ +A LF Q++ +GI SWNS+I F+ G+++EA +
Sbjct: 333 ------NALIHVYGKQGKVKDAEHLFRQIRNKGIE----SWNSLITSFVDAGKLDEALSL 382
Query: 456 FLQMQSLG----VQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALS 511
F +++ + V+ N++TWT++I G G++++ +F++M + + ++ TI C LS
Sbjct: 383 FSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILS 442
Query: 512 ACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPV 571
C ++ +L GR IHG++IR + + +LV+MYAKCG + + VF+ K+L
Sbjct: 443 ICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLIS 502
Query: 572 YNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMF 631
+N++I GY MHG A +AL++F + G PD I +L+ACSHAGLV +G E+F M
Sbjct: 503 WNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMS 562
Query: 632 SDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELA 691
++P EH+ C+V+LL R G L EA ++ MP +P ++G+LL++C ++A
Sbjct: 563 KRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIA 622
Query: 692 EYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEE 751
E I+ L LEP+ G+Y+ LSN Y+A GRW E + VR + K+K L+K G SWI++ ++
Sbjct: 623 EGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKK 682
Query: 752 LHVFVACDRSHPKTEEIYATLALLGMHV 779
+ F + + E IY L L H+
Sbjct: 683 KYKFSSGSIVQSEFETIYPVLEDLVSHM 710
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 202/655 (30%), Positives = 340/655 (51%), Gaps = 93/655 (14%)
Query: 217 VFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTL 276
V +++ L+++Y G++ AR FD + R+V AWN MI GY + G + E IR F L
Sbjct: 86 VCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFML 145
Query: 277 E-GVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLE 335
G+ P + S+L A + +G + H +A+ G D + +S+I+ YS+ +
Sbjct: 146 SSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 202
Query: 336 DAEVVFSRMVERDIVTWNLLIASYVQSG-------------------------------- 363
+A ++F M RD+ +WN +I+ Y QSG
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGD 262
Query: 364 ----------------QSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAA 407
+S++ V++ ++D+YA+ R+ + ++VF+ + +RD++ WN+++ A
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 408 YADLGRSGEASRLFYQMQLEGISPNIIS----------------------------W--- 436
Y + A LF +M+L I P+ ++ W
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 437 -----NSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFF 491
N+V++ + + G ++ A+ +F + + ++I+W T+ISG QN +EAI +
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPN----TDVISWNTIISGYAQNGFASEAIEMY 438
Query: 492 QEMLETG-IKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAK 550
M E G I + T L AC+ +LR G +HG L+++ L L +VTSL DMY K
Sbjct: 439 NIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGK 498
Query: 551 CGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNI 610
CG + A +F P +N +I+ + HG +A+ LFK + +G+ PD ITF +
Sbjct: 499 CGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTL 558
Query: 611 LNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDP 670
L+ACSH+GLV+EG F M +D+ + PS++H+GC+V++ R G L+ AL+ I +M P
Sbjct: 559 LSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQP 618
Query: 671 DAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRD 730
DA I G+LLS C +L + SEHL ++EP++ G +V LSN YA++G+W V ++R
Sbjct: 619 DASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRS 678
Query: 731 IMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEIYATLALLGMHVRLVSKV 785
I KGLRK PG S +++ ++ VF +++HP EE+Y L L ++++ V
Sbjct: 679 IAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYV 733
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 194/396 (48%), Gaps = 22/396 (5%)
Query: 85 LLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRV 144
LL C D G IH+ +K+G +V KL+ YA+ L ++F R+ V
Sbjct: 253 LLSACTEAGDFNRGVTIHSYSIKHG--LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV 310
Query: 145 KNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAV 204
+++ SW +II +A+ F EM+ + PD L ++ LG + R+V
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370
Query: 205 HGYVLKVG-FDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGL 263
G+ L+ G F + + ++++ MY K G ++ AR VF+ + +V++WN++I GY QNG
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGF 430
Query: 264 NEEAIRVFYEMTLEG-VEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGS 322
EAI ++ M EG + + + S+L A + AL +G + H + NG+ LD + +
Sbjct: 431 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490
Query: 323 SIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCER 382
S+ + Y K G LEDA +F ++ + V WN LIA + G + V
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML----------- 539
Query: 383 IDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLE-GISPNIISWNSVIL 441
K++ + + D + + TLL+A + G E F MQ + GI+P++ + ++
Sbjct: 540 ---FKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVD 596
Query: 442 GFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISG 477
+ R GQ+ A ++S+ +QP+ W L+S
Sbjct: 597 MYGRAGQLETALKF---IKSMSLQPDASIWGALLSA 629
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 112/252 (44%), Gaps = 28/252 (11%)
Query: 85 LLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRV 144
+L C + G ++H R+LKNG + + +V T L Y KC L+ A LF ++
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYL--DVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 145 KNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAV 204
N W +I + G EKA++ F EM ++GV PD+ +L AC G V G+
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 574
Query: 205 -------HGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGM-IARNVVAWNSMIV 256
+G + GC ++DMYG+ G LE A K M + + W +++
Sbjct: 575 FEMMQTDYGITPSLKHYGC------MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLS 628
Query: 257 GYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILS----ASANLDALDE------GKQAH 306
+G N + ++ E E VEP V +LS ++ + +DE GK
Sbjct: 629 ACRVHG-NVDLGKIASEHLFE-VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLR 686
Query: 307 AVAVINGMELDN 318
+ ME+DN
Sbjct: 687 KTPGWSSMEVDN 698
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 344 bits (882), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/589 (32%), Positives = 320/589 (54%), Gaps = 29/589 (4%)
Query: 189 LKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNV 248
L C L V + +H +++ + +A LI C A +VF+ + NV
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 249 VAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAV 308
NS+I + QN +A VF EM G+ + +L A + L K H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 309 AVINGMELDNVLGSSIINFYSKVGLL--EDAEVVFSRMVERDIVTWNLLIASYVQSGQSD 366
G+ D + +++I+ YS+ G L DA +F +M ERD V+WN ++ V++G+
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE-- 200
Query: 367 VVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQL 426
+ +A+++F+ + RD++ WNT+L YA +A LF +M
Sbjct: 201 ----------------LRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP- 243
Query: 427 EGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNE 486
N +SW+++++G+ + G M A+ MF +M N++TWT +I+G + E
Sbjct: 244 ---ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKE 298
Query: 487 AILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVD 546
A +M+ +G+K + L+ACT+ L G IH L R +L ++ +L+D
Sbjct: 299 ADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLD 358
Query: 547 MYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSIT 606
MYAKCGN+ +A VF+ P K+L +N M+ G +HG EA+ LF ++++GI PD +T
Sbjct: 359 MYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Query: 607 FTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTM 666
F +L +C+HAGL++EG++ F M + + P +EH+GC+V+LL R G L EA++V+ TM
Sbjct: 419 FIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
Query: 667 PCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVS 726
P +P+ I G+LL C NE ++A+ + ++L++L+P +PGNY LSN YAA+ W V+
Sbjct: 479 PMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVA 538
Query: 727 QVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEIYATLALL 775
+R MK G+ K G S +++ + +H F D+SHPK+++IY L L
Sbjct: 539 DIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/517 (26%), Positives = 238/517 (46%), Gaps = 74/517 (14%)
Query: 80 EIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLF 139
I+ E LQ ++ +Q+HA+I++ + ++ KL+ + C ++A R+F
Sbjct: 17 RIFEERLQDLPKCANLNQVKQLHAQIIRRN--LHEDLHIAPKLISALSLCRQTNLAVRVF 74
Query: 140 CRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVG 199
+++ NV ++I + + +A F EMQ G+ DNF P +LKAC W+
Sbjct: 75 NQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLP 134
Query: 200 FGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDL--EEARKVFDGMIARNVVAWNSMIVG 257
+ +H ++ K+G ++V ++LID Y +CG L +A K+F+ M R+ V+WNSM+ G
Sbjct: 135 VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGG 194
Query: 258 YVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQ-AHAVAVINGM-E 315
V+ G +A R+F EM P R ++S + LD ++ + A + M E
Sbjct: 195 LVKAGELRDARRLFDEM------PQR----DLISWNTMLDGYARCREMSKAFELFEKMPE 244
Query: 316 LDNVLGSSIINFYSKVGLLEDAEVVFSRM--VERDIVTWNLLIASYVQSG---------- 363
+ V S+++ YSK G +E A V+F +M +++VTW ++IA Y + G
Sbjct: 245 RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVD 304
Query: 364 ------------------------------------------QSDVVVASSIVDMYAKCE 381
S+ V ++++DMYAKC
Sbjct: 305 QMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCG 364
Query: 382 RIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVIL 441
+ A VFN I +D+V WNT+L G EA LF +M+ EGI P+ +++ +V+
Sbjct: 365 NLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLC 424
Query: 442 GFLRNGQMNEAKDMFLQMQSL-GVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIK 500
G ++E D F M+ + + P + + L+ L + EAI Q M ++
Sbjct: 425 SCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM---PME 481
Query: 501 PSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLP 537
P+ L AC + + + L++ D C P
Sbjct: 482 PNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDP 518
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 169/343 (49%), Gaps = 16/343 (4%)
Query: 46 SYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARI 105
S+ + L K ++R+A L EM R+ + +L G R+M ++ ++
Sbjct: 187 SWNSMLGGLVKAGELRDARRLFDEMPQRDLIS----WNTMLDGYARCREMSKAFELFEKM 242
Query: 106 LKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCR--LRVKNVFSWAAIIGLNCRVGLS 163
+ RN + +V+ Y+K +++A +F + L KNV +W II GL
Sbjct: 243 PE------RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLL 296
Query: 164 EKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSL 223
++A +M G+ D + ++L AC G + G +H + + +V ++L
Sbjct: 297 KEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNAL 356
Query: 224 IDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTR 283
+DMY KCG+L++A VF+ + +++V+WN+M+ G +G +EAI +F M EG+ P +
Sbjct: 357 LDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDK 416
Query: 284 VSVTSILSASANLDALDEG-KQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDA-EVVF 341
V+ ++L + + +DEG +++ + + +++ +VG L++A +VV
Sbjct: 417 VTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQ 476
Query: 342 SRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERID 384
+ +E ++V W L+ + + D +A ++D K + D
Sbjct: 477 TMPMEPNVVIWGALLGACRMHNEVD--IAKEVLDNLVKLDPCD 517
>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein At2g37310
OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 218/702 (31%), Positives = 343/702 (48%), Gaps = 108/702 (15%)
Query: 82 YGELLQGCVYKRDMYTGQQIHARI----LKNGDFFARNEYVETKLVVFYAKCDALDVASR 137
YG L+Q R Q+HARI +K +F A +KL+ FY + D A
Sbjct: 25 YGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLA------SKLISFYTRQDRFRQALH 78
Query: 138 LFCRLRVKNVFSW-AAIIGLNCRVGLSEK-----ALIGFVEMQEDGVSPDNFVLPNVLKA 191
+F + V+N FS+ A +I R + + IG D PD+ + VLKA
Sbjct: 79 VFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKA 138
Query: 192 CGALG--WVG-FGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNV 248
W+G R VHG+V++ GFD VFV + +I Y KC ++E ARKVFD M R+V
Sbjct: 139 LSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV 198
Query: 249 VAWNSMIVGYVQNGLNEEAIRVFYEM-TLEGVEPTRVSVTSILSASANLDALDEGKQAHA 307
V+WNSMI GY Q+G E+ +++ M +P V+V S+ A L G + H
Sbjct: 199 VSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHK 258
Query: 308 VAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDV 367
+ N +++D L +++I FY+K G L+ A +F M E+D VT+ +I+ Y+ G
Sbjct: 259 KMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKE 318
Query: 368 VVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLE 427
+A LF +M+
Sbjct: 319 AMA-------------------------------------------------LFSEMESI 329
Query: 428 GISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEA 487
G+S +WN++I G ++N E + F +M G +PN +T ++L+ LT +S
Sbjct: 330 GLS----TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSS----- 380
Query: 488 ILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDM 547
+L+ G+ IH + IR+ + TS++D
Sbjct: 381 ------------------------------NLKGGKEIHAFAIRNGADNNIYVTTSIIDN 410
Query: 548 YAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITF 607
YAK G + A+RVFD + L + A+I+ YA+HG + A +LF +Q G PD +T
Sbjct: 411 YAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTL 470
Query: 608 TNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMP 667
T +L+A +H+G + +F M + + ++P +EH+ C+V++LSR G L +A+ I MP
Sbjct: 471 TAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMP 530
Query: 668 CDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQ 727
DP A + G+LL+ + E+A + + L ++EP+N GNY ++N Y +GRW E
Sbjct: 531 IDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEM 590
Query: 728 VRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEIY 769
VR+ MK GL+K PG SWI+ + L F+A D S +++E+Y
Sbjct: 591 VRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMY 632
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 157/343 (45%), Gaps = 50/343 (14%)
Query: 39 SYESLYKSYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTG 98
S+ S+ Y Q S K++ +A+ + C +F+ + Q C D+ G
Sbjct: 200 SWNSMISGY-SQSGSFEDCKKMYKAM-----LACSDFKPNGVTVISVFQACGQSSDLIFG 253
Query: 99 QQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNC 158
++H ++++N + + ++ FYAKC +LD A LF + K+ ++ AII
Sbjct: 254 LEVHKKMIEN--HIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYM 311
Query: 159 RVGLSEKALIGFVEMQEDGVS-------------------------------PDNFVLPN 187
GL ++A+ F EM+ G+S P+ L +
Sbjct: 312 AHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSS 371
Query: 188 VLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARN 247
+L + + G+ +H + ++ G D ++V +S+ID Y K G L A++VFD R+
Sbjct: 372 LLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRS 431
Query: 248 VVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHA 307
++AW ++I Y +G ++ A +F +M G +P V++T++LSA A+ G A
Sbjct: 432 LIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAH-----SGDSDMA 486
Query: 308 VAVINGM--ELDNVLG----SSIINFYSKVGLLEDAEVVFSRM 344
+ + M + D G + +++ S+ G L DA S+M
Sbjct: 487 QHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKM 529
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/564 (33%), Positives = 309/564 (54%), Gaps = 65/564 (11%)
Query: 207 YVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNE- 265
Y+ K +F + +I + GD++ A +VF GM A+N + WNS+++G ++
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 266 EAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSII 325
EA ++F E+ EP S +LS V N +
Sbjct: 111 EAHQLFDEIP----EPDTFSYNIMLSCY----------------VRN------------V 138
Query: 326 NFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDN 385
NF E A+ F RM +D +WN +I Y + G+ ++
Sbjct: 139 NF-------EKAQSFFDRMPFKDAASWNTMITGYARRGE------------------MEK 173
Query: 386 AKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLR 445
A+++F S++ ++ V WN +++ Y + G +AS F + G+ ++W ++I G+++
Sbjct: 174 ARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMK 229
Query: 446 NGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTT 505
++ A+ MF + + V NL+TW +ISG +NS + + F+ MLE GI+P+++
Sbjct: 230 AKKVELAEAMF---KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 506 ITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISP 565
++ AL C+++++L+ GR IH + + LC +TSL+ MY KCG + A ++F++
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 566 SKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLE 625
K++ +NAMISGYA HG A +AL LF+ + I PD ITF +L AC+HAGLVN G+
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMA 406
Query: 626 LFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKS 685
F M D++V+P +H+ C+V+LL R G L+EAL++I +MP P A + G+LL C
Sbjct: 407 YFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVH 466
Query: 686 NETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSW 745
ELAE+ +E LLQL N YV L+N YA+ RW +V++VR MKE + K PG SW
Sbjct: 467 KNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSW 526
Query: 746 IQIGEELHVFVACDRSHPKTEEIY 769
I+I ++H F + DR HP+ + I+
Sbjct: 527 IEIRNKVHHFRSSDRIHPELDSIH 550
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 119/242 (49%), Gaps = 9/242 (3%)
Query: 126 YAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVL 185
Y + + A F R+ K+ SW +I R G EKA F M E N ++
Sbjct: 134 YVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMI 193
Query: 186 PNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGM-I 244
++ CG L +A H + KV V +++I Y K +E A +F M +
Sbjct: 194 SGYIE-CGDLE-----KASHFF--KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTV 245
Query: 245 ARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQ 304
+N+V WN+MI GYV+N E+ +++F M EG+ P ++S L + L AL G+Q
Sbjct: 246 NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQ 305
Query: 305 AHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQ 364
H + + + D +S+I+ Y K G L DA +F M ++D+V WN +I+ Y Q G
Sbjct: 306 IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGN 365
Query: 365 SD 366
+D
Sbjct: 366 AD 367
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
Query: 120 TKLVVFYAKCDALDVASRLFCRLRV-KNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGV 178
T ++ Y K +++A +F + V KN+ +W A+I E L F M E+G+
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 179 SPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARK 238
P++ L + L C L + GR +H V K V +SLI MY KCG+L +A K
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWK 340
Query: 239 VFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSA 292
+F+ M ++VVAWN+MI GY Q+G ++A+ +F EM + P ++ ++L A
Sbjct: 341 LFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLA 394
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 342 bits (878), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 224/765 (29%), Positives = 378/765 (49%), Gaps = 97/765 (12%)
Query: 100 QIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCR 159
Q+HA +L G R+ TKL+ YA + D + +F + F + +I N
Sbjct: 19 QLHAHLLVTGRL-RRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVW 77
Query: 160 VGLSEKALIGFVEMQEDGVSPDNFVLPNVLKAC-GALGWVGFGRAVHGYVLKVGFDGCVF 218
L + A+ + + + FV P+VL+AC G+ + G VHG ++K G D
Sbjct: 78 CHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAV 137
Query: 219 VASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEG 278
+ +SL+ MYG+ G+L +A KVFDGM R++VAW++++ ++NG +A+R+F M +G
Sbjct: 138 IETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDG 197
Query: 279 VEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAE 338
VEP V++ S++ A L L + H +LD L +S++ YSK G L +E
Sbjct: 198 VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSE 257
Query: 339 VVFSRMVERDIVTWNLLIASY----------------VQSG-QSDVVVASSI-------- 373
+F ++ +++ V+W +I+SY ++SG + ++V S+
Sbjct: 258 RIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIG 317
Query: 374 ----------------------------VDMYAKCERIDNAKQVFNSIILRDVVLWNTLL 405
V++YA+C ++ + + V + R++V WN+L+
Sbjct: 318 LIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLI 377
Query: 406 AAYADLGRSGEASRLFYQMQLEGISPNIISW----------------------------- 436
+ YA G +A LF QM + I P+ +
Sbjct: 378 SLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS 437
Query: 437 -----NSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFF 491
NS+I + ++G ++ A +F Q++ +++TW +++ G +QN EAI F
Sbjct: 438 DEFVQNSLIDMYSKSGSVDSASTVFNQIK----HRSVVTWNSMLCGFSQNGNSVEAISLF 493
Query: 492 QEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLC-LPTPIVTSLVDMYAK 550
M + ++ + T + AC+ + SL G+ +H LI L L T T+L+DMYAK
Sbjct: 494 DYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD--TALIDMYAK 551
Query: 551 CGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNI 610
CG+++ A+ VF S+ + +++MI+ Y MHG A++ F + + G P+ + F N+
Sbjct: 552 CGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNV 611
Query: 611 LNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDP 670
L+AC H+G V EG + + + V P+ EHF C ++LLSR G+L EA R I MP
Sbjct: 612 LSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLA 670
Query: 671 DAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRD 730
DA + GSL++ C + ++ + I L + D+ G Y LSN YA G W E ++R
Sbjct: 671 DASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRS 730
Query: 731 IMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEIYATLALL 775
MK L+K PG S I+I +++ F A + + +T+EIY L L
Sbjct: 731 AMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 342 bits (876), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 200/610 (32%), Positives = 329/610 (53%), Gaps = 62/610 (10%)
Query: 218 FVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLE 277
F ++++ Y K GD++ + FD + R+ V+W +MIVGY G +AIRV +M E
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 278 GVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDA 337
G+EPT+ ++T++L++ A ++ GK+ H+ V G+ + + +S++N Y+K G A
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 338 EVVFSRMVERDIVTWNLLIASYVQSGQSDVVVA--------------------------- 370
+ VF RMV RDI +WN +IA ++Q GQ D+ +A
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 371 ----------------------SSIVDMYAKCERIDNAKQVFNSII-----LRDVVLWNT 403
+S++ A E++ KQ+ + I+ + +VL N
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL-NA 319
Query: 404 LLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLG 463
L++ Y+ G A RL Q + + I + +++ G+++ G MN+AK++F+ ++
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDL--KIEGFTALLDGYIKLGDMNQAKNIFVSLK--- 374
Query: 464 VQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGR 523
+++ WT +I G Q+ EAI F+ M+ G +P++ T+ LS + +ASL +G+
Sbjct: 375 -DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 524 AIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFD-ISPSKELPVYNAMISGYAMH 582
IHG ++ + +L+ MYAK GNI A R FD I ++ + +MI A H
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Query: 583 GLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEH 642
G A EAL LF+ + +G+ PD IT+ + +AC+HAGLVN+G + F M ++ P++ H
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553
Query: 643 FGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLE 702
+ C+V+L R G L EA I MP +PD GSLLS C +L + +E LL LE
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLE 613
Query: 703 PDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSH 762
P+N G Y AL+N Y+A G+W E +++R MK+ ++K G SWI++ ++HVF D +H
Sbjct: 614 PENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTH 673
Query: 763 PKTEEIYATL 772
P+ EIY T+
Sbjct: 674 PEKNEIYMTM 683
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 170/693 (24%), Positives = 294/693 (42%), Gaps = 169/693 (24%)
Query: 80 EIYGELLQGCVYKRD-MYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRL 138
E+ LLQ V K + +T Q +H R++K+G F+ Y+ L+ Y+K A +L
Sbjct: 14 ELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFS--VYLMNNLMNVYSKTGYALHARKL 71
Query: 139 FCRLRVKNVFSWAAIIGLNCR-------------------------------VGLSEKAL 167
F + ++ FSW ++ + +G KA+
Sbjct: 72 FDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAI 131
Query: 168 IGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMY 227
+M ++G+ P F L NVL + A + G+ VH +++K+G G V V++SL++MY
Sbjct: 132 RVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191
Query: 228 GKCGDLEEARKVFDGMIA-------------------------------RNVVAWNSMIV 256
KCGD A+ VFD M+ R++V WNSMI
Sbjct: 192 AKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMIS 251
Query: 257 GYVQNGLNEEAIRVFYEMTLEG-VEPTRVSVTSILSASANLDALDEGKQAHAVAVINGME 315
G+ Q G + A+ +F +M + + P R ++ S+LSA ANL+ L GKQ H+ V G +
Sbjct: 252 GFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311
Query: 316 LDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVA--SSI 373
+ ++ +++I+ YS+ G +E A R++E Q G D+ + +++
Sbjct: 312 ISGIVLNALISMYSRCGGVETAR----RLIE--------------QRGTKDLKIEGFTAL 353
Query: 374 VDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNI 433
+D Y K ++ AK +F S+ RDVV W ++ Y G GEA LF M G PN
Sbjct: 354 LDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNS 413
Query: 434 ISW-----------------------------------NSVILGFLRNGQMNEAKDMFLQ 458
+ N++I + + G + A F
Sbjct: 414 YTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAF-- 471
Query: 459 MQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVAS 518
+ + + ++WT++I L Q+ EA+ F+ ML G++P T SACT
Sbjct: 472 -DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGL 530
Query: 519 LRNGRAIHGYLIRHDLCLPT-PIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMIS 577
+ GR + D +PT +VD++ + G + +A+ + P
Sbjct: 531 VNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMP------------ 578
Query: 578 GYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQ-- 635
I+PD +T+ ++L+AC V++ ++L G + +
Sbjct: 579 ----------------------IEPDVVTWGSLLSACR----VHKNIDL--GKVAAERLL 610
Query: 636 -VKPSME-HFGCVVNLLSRCGNLDEALRVILTM 666
++P + + NL S CG +EA ++ +M
Sbjct: 611 LLEPENSGAYSALANLYSACGKWEEAAKIRKSM 643
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 171/354 (48%), Gaps = 22/354 (6%)
Query: 388 QVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNG 447
+V S ++ V L N L+ Y+ G + A +LF +M L SWN+V+ + + G
Sbjct: 39 RVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR----TAFSWNTVLSAYSKRG 94
Query: 448 QMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTIT 507
M+ + F Q+ Q + ++WTT+I G ++AI +M++ GI+P+ T+T
Sbjct: 95 DMDSTCEFFDQLP----QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 508 CALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSK 567
L++ + G+ +H ++++ L + SL++MYAKCG+ AK VFD +
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 568 ELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELF 627
++ +NAMI+ + G A+A F+ + ++ D +T+ ++++ + G L++F
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAER----DIVTWNSMISGFNQRGYDLRALDIF 266
Query: 628 VGMFSDHQVKPSMEHFGCVVNLLSRCGNLD------EALRVILTMPCDPDAHIIGSLLST 681
M D + P + F + ++LS C NL+ + I+T D ++ +L+S
Sbjct: 267 SKMLRDSLLSP--DRF-TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 682 CVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEK 735
+ E A + E + G + AL + Y G N+ + +K++
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEG-FTALLDGYIKLGDMNQAKNIFVSLKDR 376
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 102/223 (45%), Gaps = 16/223 (7%)
Query: 501 PSTTTITCALSACTDV----ASLRNGR----AIHGYLIRHDLCLPTPIVTSLVDMYAKCG 552
P +++ L CT++ + NGR +H +I+ L ++ +L+++Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 553 NIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILN 612
A+++FD P + +N ++S Y+ G F L Q+ DS+++T ++
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR----DSVSWTTMIV 119
Query: 613 ACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRV---ILTMPCD 669
+ G ++ + + M + ++P+ V+ ++ ++ +V I+ +
Sbjct: 120 GYKNIGQYHKAIRVMGDMVKE-GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR 178
Query: 670 PDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVAL 712
+ + SLL+ K + +A+++ + ++ + + +AL
Sbjct: 179 GNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 341 bits (874), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 197/596 (33%), Positives = 326/596 (54%), Gaps = 33/596 (5%)
Query: 202 RAVHGYVLKVGFDGCVFVASSLIDM--YGKCGDLEEARKVFDGMIARNVVAWNSMIVGYV 259
+ HG++++ G + AS L M LE ARKVFD + N AWN++I Y
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 260 QNGLNEEAIRVFYEMTLEG-VEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDN 318
+I F +M E P + + ++ A+A + +L G+ H +AV + + D
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 319 VLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSG------------QSD 366
+ +S+I+ Y G L+ A VF+ + E+D+V+WN +I +VQ G +S+
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 367 VVVAS--SIVDMYAKCERIDN---AKQVFNSI----ILRDVVLWNTLLAAYADLGRSGEA 417
V AS ++V + + C +I N +QV + I + ++ L N +L Y G +A
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 418 SRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISG 477
RLF M+ + ++W +++ G+ + A+++ M Q +++ W LIS
Sbjct: 287 KRLFDAME----EKDNVTWTTMLDGYAISEDYEAAREVLNSMP----QKDIVAWNALISA 338
Query: 478 LTQNSCGNEAILFFQEM-LETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCL 536
QN NEA++ F E+ L+ +K + T+ LSAC V +L GR IH Y+ +H + +
Sbjct: 339 YEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRM 398
Query: 537 PTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQ 596
+ ++L+ MY+KCG++ +++ VF+ +++ V++AMI G AMHG EA+ +F +Q
Sbjct: 399 NFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQ 458
Query: 597 QKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNL 656
+ + P+ +TFTN+ ACSH GLV+E LF M S++ + P +H+ C+V++L R G L
Sbjct: 459 EANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYL 518
Query: 657 DEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAY 716
++A++ I MP P + G+LL C LAE LL+LEP N G +V LSN Y
Sbjct: 519 EKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIY 578
Query: 717 AASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEIYATL 772
A G+W VS++R M+ GL+K PGCS I+I +H F++ D +HP +E++Y L
Sbjct: 579 AKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 634
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/540 (25%), Positives = 261/540 (48%), Gaps = 68/540 (12%)
Query: 85 LLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCD--ALDVASRLFCRL 142
L++ CV R + +Q H +++ G F + Y +KL A +L+ A ++F +
Sbjct: 36 LIERCVSLRQL---KQTHGHMIRTGTF--SDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 143 RVKNVFSWAAIIGLNCRVGLSEKALIGFVEM-QEDGVSPDNFVLPNVLKACGALGWVGFG 201
N F+W +I ++ F++M E P+ + P ++KA + + G
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 202 RAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQN 261
+++HG +K VFVA+SLI Y CGDL+ A KVF + ++VV+WNSMI G+VQ
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 262 GLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLG 321
G ++A+ +F +M E V+ + V++ +LSA A + L+ G+Q + N + ++ L
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 322 SSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCE 381
+++++ Y+K G +EDA+ +F M E+D VTW ++++D YA E
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW------------------TTMLDGYAISE 312
Query: 382 RIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLE-------------- 427
+ A++V NS+ +D+V WN L++AY G+ EA +F+++QL+
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 428 ----------------------GISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQ 465
GI N +++I + + G + +++++F ++ +
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE----K 428
Query: 466 PNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAI 525
++ W+ +I GL + CGNEA+ F +M E +KP+ T T AC+ + ++
Sbjct: 429 RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL 488
Query: 526 -HGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISP-SKELPVYNAMISGYAMHG 583
H + + +VD+ + G + +A + + P V+ A++ +H
Sbjct: 489 FHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHA 548
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 51 ISSLSKEKQIREAVDLLTEMKC-RNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNG 109
IS+ + + EA+ + E++ +N ++ L C + G+ IH+ I K+G
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 110 DFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIG 169
N +V + L+ Y+KC L+ + +F + ++VF W+A+IG G +A+
Sbjct: 396 --IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453
Query: 170 FVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAV-------HGYVLKVGFDGCVFVASS 222
F +MQE V P+ NV AC G V ++ +G V + C+
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI----- 508
Query: 223 LIDMYGKCGDLEEARKVFDGM-IARNVVAWNSMI 255
+D+ G+ G LE+A K + M I + W +++
Sbjct: 509 -VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 230/746 (30%), Positives = 370/746 (49%), Gaps = 100/746 (13%)
Query: 134 VASRLFCRLRVKNVFSW-AAIIGLNCRVGLSEKALIGFVEMQEDG--VSPDNFVLPNVLK 190
+A +LF + W IIG C L +AL+ + M++ + D + + LK
Sbjct: 57 LARQLFDAIPKPTTVLWNTIIIGFICN-NLPHEALLFYSRMKKTAPFTNCDAYTYSSTLK 115
Query: 191 ACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMY------GKCGDLEEARKVFDGMI 244
AC + G+AVH ++++ + V +SL++MY C + + RKVFD M
Sbjct: 116 ACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMR 175
Query: 245 ARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQ 304
+NVVAWN++I YV+ G N EA R F M V+P+ VS ++ A + ++ +
Sbjct: 176 RKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANV 235
Query: 305 AHAVAVINGMEL--DNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWN--------- 353
+ + + G E D + SS I+ Y+++G +E + VF VER+I WN
Sbjct: 236 FYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN 295
Query: 354 --------------------------LLIASYVQSGQS------------------DVVV 369
LL AS V + Q +V+
Sbjct: 296 DCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVI 355
Query: 370 ASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGI 429
+S++ MY++C + + VF S+ RDVV WNT+++A+ G E L Y+MQ +G
Sbjct: 356 VNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 415
Query: 430 SPNIISWNSVILGF--LRNGQMNEAKDMFLQMQSL---GVQPNLI--------------- 469
+ I+ +++ LRN ++ + FL Q + G+ LI
Sbjct: 416 KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKL 475
Query: 470 ------------TWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVA 517
TW ++ISG TQN + L F++MLE I+P+ T+ L AC+ +
Sbjct: 476 FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIG 535
Query: 518 SLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMIS 577
S+ G+ +HG+ IR L + ++LVDMY+K G I A+ +F + + Y MI
Sbjct: 536 SVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMIL 595
Query: 578 GYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVK 637
GY HG+ A++LF ++Q+ GI PD+ITF +L+ACS++GL++EGL++F M + ++
Sbjct: 596 GYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQ 655
Query: 638 PSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPD-AHIIGSLLSTCVKSNETELAEYISE 696
PS EH+ C+ ++L R G ++EA + + + + A + GSLL +C E ELAE +SE
Sbjct: 656 PSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSE 715
Query: 697 HLLQLEPDN--PGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHV 754
L + + G V LSN YA +W V +VR M+EKGL+K G S I+I ++
Sbjct: 716 RLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNC 775
Query: 755 FVACDRSHPKTEEIYATLALLGMHVR 780
FV+ D+ HP + EIY + L +R
Sbjct: 776 FVSRDQEHPHSSEIYDVIDGLAKDMR 801
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 148/642 (23%), Positives = 272/642 (42%), Gaps = 142/642 (22%)
Query: 231 GDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEM--TLEGVEPTRVSVTS 288
G+ + AR++FD + V WN++I+G++ N L EA+ + M T + +S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 289 ILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLED------AEVVFS 342
L A A L GK H + V+ +S++N Y D VF
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 343 RMVERDIVTWNLLIASYVQSGQS-----------------------DVVVASSI------ 373
M +++V WN LI+ YV++G++ +V A SI
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 374 -------------------------VDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAY 408
+ MYA+ I+++++VF+S + R++ +WNT++ Y
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 409 ADLGRSGEASRLFYQM------------------------------QLEG-ISPN----- 432
E+ LF + Q G +S N
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352
Query: 433 IISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQ 492
I+ NS+++ + R G ++++ +FL M+ + ++++W T+IS QN +E ++
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVFLSMR----ERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 493 EMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCG 552
EM + G K T+T LSA +++ + G+ H +LIR + + + L+DMY+K G
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSG 467
Query: 553 NIHQAKRVFDIS--PSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNI 610
I ++++F+ S ++ +N+MISGY +G + +F+ + ++ I P+++T +I
Sbjct: 468 LIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASI 527
Query: 611 LNACSHAGLVNEGLEL-------------FVG------------------MFSDHQVKPS 639
L ACS G V+ G +L FV MFS + + S
Sbjct: 528 LPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS 587
Query: 640 MEHFGCVVNLLSRCGNLDEALRVILTMP---CDPDAHIIGSLLSTCVKSNETELAEYISE 696
+ + ++ + G + A+ + L+M PDA ++LS C S + I E
Sbjct: 588 VTYTTMILG-YGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFE 646
Query: 697 HLLQLEPDNPG--NYVALSNAYAASGRWNEVSQVRDIMKEKG 736
+ ++ P +Y +++ GR NE + + E+G
Sbjct: 647 EMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEG 688
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 131/243 (53%), Gaps = 5/243 (2%)
Query: 62 EAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETK 121
E + L+ EM+ + F+I LL R+ G+Q HA +++ G F E + +
Sbjct: 402 EGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF---EGMNSY 458
Query: 122 LVVFYAKCDALDVASRLF--CRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVS 179
L+ Y+K + ++ +LF ++ +W ++I + G +EK + F +M E +
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518
Query: 180 PDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKV 239
P+ + ++L AC +G V G+ +HG+ ++ D VFVAS+L+DMY K G ++ A +
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDM 578
Query: 240 FDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDAL 299
F RN V + +MI+GY Q+G+ E AI +F M G++P ++ ++LSA + +
Sbjct: 579 FSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLI 638
Query: 300 DEG 302
DEG
Sbjct: 639 DEG 641
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 27/251 (10%)
Query: 429 ISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAI 488
++P S S + ++G A+ +F + +P + W T+I G N+ +EA+
Sbjct: 35 LTPQTPSIRSRLSKICQDGNPQLARQLFDAIP----KPTTVLWNTIIIGFICNNLPHEAL 90
Query: 489 LFFQEMLETGIKPSTT----TITCALSACTDVASLRNGRAIHGYLIRHDLCLPTP---IV 541
LF+ M +T P T T + L AC + +L+ G+A+H +LIR CL +
Sbjct: 91 LFYSRMKKTA--PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIR---CLQNSSRVVH 145
Query: 542 TSLVDMYAKCGNIHQ------AKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNL 595
SL++MY C N ++VFD K + +N +IS Y G EA F +
Sbjct: 146 NSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIM 205
Query: 596 QQKGIDPDSITFTNILNACSHAGLVNEGLELFVGM---FSDHQVKPSMEHFGCVVNLLSR 652
+ + P ++F N+ A S + + + +F G+ D VK + +++ +
Sbjct: 206 MRMEVKPSPVSFVNVFPAVSISRSIKKA-NVFYGLMLKLGDEYVK-DLFVVSSAISMYAE 263
Query: 653 CGNLDEALRVI 663
G+++ + RV
Sbjct: 264 LGDIESSRRVF 274
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 340 bits (871), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 217/766 (28%), Positives = 375/766 (48%), Gaps = 93/766 (12%)
Query: 78 GPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASR 137
G + LL+ +R +G+ IH I++ G + Y+ +L+ Y +C D A +
Sbjct: 5 GNKYLASLLRCYRDERCKLSGKVIHGFIVRMG--MKSDTYLCNRLLDLYIECGDGDYARK 62
Query: 138 LFCRLRVKNVFSWAAIIGLNCRVG-------------------------------LSEKA 166
+F + V++V+SW A + C+VG EKA
Sbjct: 63 VFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKA 122
Query: 167 LIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDM 226
L+ + M DG P F L +VL AC + FG HG +K G D +FV ++L+ M
Sbjct: 123 LVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSM 182
Query: 227 YGKCGDL-EEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVS 285
Y KCG + + +VF+ + N V++ ++I G + EA+++F M +GV+ V
Sbjct: 183 YAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVC 242
Query: 286 VTSILSASA---NLDALDE------GKQAHAVAVINGMELDNVLGSSIINFYSKVGLLED 336
+++ILS SA D+L E GKQ H +A+ G D L +S++ Y+K +
Sbjct: 243 LSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNG 302
Query: 337 AEVVFSRMVERDIVTWNLLIASYVQSGQSDVVV--------------ASSIVDMYAKCER 382
AE++F+ M E ++V+WN++I + Q +SD V + + + C R
Sbjct: 303 AELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFR 362
Query: 383 ---IDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSV 439
++ +++F+SI V WN +L+ Y++ EA F QMQ + + P+ + + +
Sbjct: 363 SGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVI 422
Query: 440 I-----LGFLRNGQM------------------------NEAKDMFLQ---MQSLGVQPN 467
+ L FL G+ +E + M + + +
Sbjct: 423 LSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELD 482
Query: 468 LITWTTLISGLTQNSCGNEAILFFQEMLETGIK-PSTTTITCALSACTDVASLRNGRAIH 526
+ W ++ISG N +A++ F+ M +T + P+ T+ LS+C+ + SL +GR H
Sbjct: 483 IACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFH 542
Query: 527 GYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAV 586
G +++ + + T+L DMY KCG I A++ FD K ++N MI GY +G
Sbjct: 543 GLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGD 602
Query: 587 EALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCV 646
EA+ L++ + G PD ITF ++L ACSH+GLV GLE+ M H ++P ++H+ C+
Sbjct: 603 EAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICI 662
Query: 647 VNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNP 706
V+ L R G L++A ++ P + + LLS+C + LA ++E L++L+P +
Sbjct: 663 VDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSS 722
Query: 707 GNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEEL 752
YV LSN Y++ +W++ + ++ +M + + K PG SW G +L
Sbjct: 723 AAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 337 bits (865), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 206/667 (30%), Positives = 339/667 (50%), Gaps = 85/667 (12%)
Query: 191 ACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVA 250
AC + + GR +H ++L + + ++ MYGKCG L +AR+VFD M RN+V+
Sbjct: 76 ACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVS 135
Query: 251 WNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVA- 309
+ S+I GY QNG EAIR++ +M E + P + + SI+ A A+ + GKQ HA
Sbjct: 136 YTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI 195
Query: 310 -----------------------------VINGMELDNVLG-SSIINFYSKVGLLEDAEV 339
V G+ + +++ SSII +S++G +A
Sbjct: 196 KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255
Query: 340 VFSRMVERDIVTWN-LLIASYVQSGQS---------------------DVVVASSIVDMY 377
M+ + N + S +++ S + + S+ DMY
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315
Query: 378 AKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWN 437
A+C +++A++VF+ I D WN ++A A+ G + EA +F QM+ G P+ IS
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 438 SVIL---------------------GFLRNGQM-NEAKDMFLQMQSLGVQPNL------- 468
S++ GFL + + N M+ L NL
Sbjct: 376 SLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN 435
Query: 469 ---ITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAI 525
++W T+++ Q+ E + F+ ML + +P T+ L C +++SL+ G +
Sbjct: 436 ADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV 495
Query: 526 HGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLA 585
H Y ++ L I L+DMYAKCG++ QA+R+FD ++++ ++ +I GYA G
Sbjct: 496 HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFG 555
Query: 586 VEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGC 645
EAL LFK ++ GI+P+ +TF +L ACSH GLV EGL+L+ M ++H + P+ EH C
Sbjct: 556 EEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSC 615
Query: 646 VVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDN 705
VV+LL+R G L+EA R I M +PD + +LLS C LA+ +E++L+++P N
Sbjct: 616 VVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFN 675
Query: 706 PGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKT 765
+V L + +A+SG W + +R MK+ ++K PG SWI+I +++H+F A D HP+
Sbjct: 676 STAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPER 735
Query: 766 EEIYATL 772
++IY L
Sbjct: 736 DDIYTVL 742
Score = 196 bits (497), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 254/570 (44%), Gaps = 67/570 (11%)
Query: 46 SYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARI 105
SY I+ S+ Q EA+ L +M + +G +++ C D+ G+Q+HA++
Sbjct: 135 SYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194
Query: 106 LK---NGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGL 162
+K + A+N L+ Y + + + ASR+F + +K++ SW++II ++G
Sbjct: 195 IKLESSSHLIAQN-----ALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGF 249
Query: 163 SEKALIGFVEMQEDGV-SPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVAS 221
+AL EM GV P+ ++ + LKAC +L +G +HG +K G
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 222 SLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEP 281
SL DMY +CG L AR+VFD + + +WN +I G NG +EA+ VF +M G P
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 282 TRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVF 341
+S+ S+L A AL +G Q H+ + G D + +S++ Y+ L +F
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLF 429
Query: 342 SRMVER-DIVTWNLLIASYVQSGQ---------------------------------SDV 367
D V+WN ++ + +Q Q S +
Sbjct: 430 EDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSL 489
Query: 368 VVASSI-------------------VDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAY 408
+ S + +DMYAKC + A+++F+S+ RDVV W+TL+ Y
Sbjct: 490 KLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGY 549
Query: 409 ADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQS-LGVQPN 467
A G EA LF +M+ GI PN +++ V+ G + E ++ MQ+ G+ P
Sbjct: 550 AQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPT 609
Query: 468 LITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHG 527
+ ++ L + NEA F EM ++P LSAC ++ +
Sbjct: 610 KEHCSCVVDLLARAGRLNEAERFIDEM---KLEPDVVVWKTLLSACKTQGNVHLAQKAAE 666
Query: 528 YLIRHDLCLPTPIVTSLVDMYAKCGNIHQA 557
+++ D T V L M+A GN A
Sbjct: 667 NILKIDPFNSTAHVL-LCSMHASSGNWENA 695
>sp|Q1PFA6|PP144_ARATH Pentatricopeptide repeat-containing protein At2g02750
OS=Arabidopsis thaliana GN=PCMP-E22 PE=2 SV=2
Length = 613
Score = 337 bits (864), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 201/587 (34%), Positives = 327/587 (55%), Gaps = 25/587 (4%)
Query: 179 SPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARK 238
SP+ F P +LK+C LG V GR +H V+K GF VF A++L+ MY K + +A K
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 239 VFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDA 298
V D M R + + N+ + G ++NG +A R+F + + G V+V S+L +++
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG 147
Query: 299 LDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIAS 358
G Q H +A+ +G E++ +G+S+++ YS+ G A +F ++ + +VT+N I+
Sbjct: 148 ---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 359 YVQSGQSDVVVAS---------------SIVDMYAKCERIDN---AKQVFNSIILRDVVL 400
+++G ++V + + V+ C + N +Q+ ++ ++
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 401 WNTLLAAYADLGRSGEASRLFYQMQLE-GISPNIISWNSVILGFLRNGQMNEAKDMFLQM 459
+ A D+ + Y + E + N+ISWNSVI G + NGQ A ++F ++
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Query: 460 QSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASL 519
S G++P+ TW +LISG +Q EA FF+ ML + PS +T LSAC+D+ +L
Sbjct: 325 DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTL 384
Query: 520 RNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFD-ISPSKELPVY-NAMIS 577
+NG+ IHG++I+ ++TSL+DMY KCG A+R+FD P + PV+ N MIS
Sbjct: 385 KNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMIS 444
Query: 578 GYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVK 637
GY HG A+ +F+ L+++ ++P TFT +L+ACSH G V +G ++F M ++ K
Sbjct: 445 GYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYK 504
Query: 638 PSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEH 697
PS EH GC+++LL R G L EA VI M +P + + SLL +C + + L E +
Sbjct: 505 PSTEHIGCMIDLLGRSGRLREAKEVIDQMS-EPSSSVYSSLLGSCRQHLDPVLGEEAAMK 563
Query: 698 LLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCS 744
L +LEP+NP +V LS+ YAA RW +V +R ++ +K L K PG S
Sbjct: 564 LAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/519 (23%), Positives = 241/519 (46%), Gaps = 59/519 (11%)
Query: 82 YGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCR 141
+ LL+ C D+ G+ +HA+++K G F + + T LV Y K + A ++
Sbjct: 34 FPPLLKSCAKLGDVVQGRILHAQVVKTGFFV--DVFTATALVSMYMKVKQVTDALKVLDE 91
Query: 142 LRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFG 201
+ + + S A + G A F + + G ++ + +VL CG + G
Sbjct: 92 MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---IEGG 148
Query: 202 RAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQN 261
+H +K GF+ V+V +SL+ MY +CG+ A ++F+ + ++VV +N+ I G ++N
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 262 GLNEEAIRVFYEM-TLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVL 320
G+ VF M EP V+ + ++A A+L L G+Q H + + + + ++
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMV 268
Query: 321 GSSIINFYSKVGLLEDAEVVFSRMVE-RDIVTWNLLIASYVQSGQSDVVVASSIVDMYAK 379
G+++I+ YSK + A +VF+ + + R++++WN +I+ + +GQ + + V+++
Sbjct: 269 GTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHE-----TAVELF-- 321
Query: 380 CERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISP-------- 431
E++D+ + D WN+L++ ++ LG+ EA + F +M + P
Sbjct: 322 -EKLDSEG------LKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSL 374
Query: 432 ---------------------------NIISWNSVILGFLRNGQMNEAKDMFLQMQSLGV 464
+I S+I +++ G + A+ +F + +
Sbjct: 375 LSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPK 434
Query: 465 QPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRA 524
P + W +ISG ++ AI F+ + E ++PS T T LSAC+ ++ G
Sbjct: 435 DP--VFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQ 492
Query: 525 IHGYLIRHDLCLP-TPIVTSLVDMYAKCGNIHQAKRVFD 562
I + P T + ++D+ + G + +AK V D
Sbjct: 493 IFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVID 531
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 209/454 (46%), Gaps = 69/454 (15%)
Query: 51 ISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGD 110
+S L + R+A + + + + +L GC D+ G Q+H +K+G
Sbjct: 104 VSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSG- 159
Query: 111 FFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGF 170
F YV T LV Y++C +A+R+F ++ K+V ++ A I GL E ++
Sbjct: 160 -FEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS-----GLMENGVMNL 213
Query: 171 VE------MQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLI 224
V + P++ N + AC +L + +GR +HG V+K F V ++LI
Sbjct: 214 VPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALI 273
Query: 225 DMYGKCGDLEEARKVFDGMI-ARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTR 283
DMY KC + A VF + RN+++WNS+I G + NG +E A+ +F ++ EG++P
Sbjct: 274 DMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDS 333
Query: 284 VS-----------------------------------VTSILSASANLDALDEGKQAHAV 308
+ +TS+LSA +++ L GK+ H
Sbjct: 334 ATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGH 393
Query: 309 AVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRM--VERDIVTWNLLIASYVQSGQSD 366
+ E D + +S+I+ Y K GL A +F R +D V WN++I+ Y + G+ +
Sbjct: 394 VIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECE 453
Query: 367 VVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQL 426
+ I ++ + E+++ + F ++ L+A + G + S++F MQ
Sbjct: 454 SAI--EIFELLRE-EKVEPSLATFTAV-----------LSACSHCGNVEKGSQIFRLMQE 499
Query: 427 E-GISPNIISWNSVILGFLRNGQMNEAKDMFLQM 459
E G P+ +I R+G++ EAK++ QM
Sbjct: 500 EYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 231/795 (29%), Positives = 381/795 (47%), Gaps = 109/795 (13%)
Query: 82 YGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLF-- 139
+ LL+ C ++ G+ IH ++ G + + ++ T LV Y KC LD A ++F
Sbjct: 63 FPSLLKACSALTNLSYGKTIHGSVVVLG--WRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 140 -----CRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGA 194
+ ++V W ++I + ++ + F M GV PD F L V+
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 195 LGWVGF----GRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIAR-NVV 249
G F G+ +HG++L+ D F+ ++LIDMY K G +A +VF + + NVV
Sbjct: 181 EG--NFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 250 AWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVA 309
WN MIVG+ +G+ E ++ ++ V+ S T L A + + G+Q H
Sbjct: 239 LWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV 298
Query: 310 VINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSG------ 363
V G+ D + +S+++ YSK G++ +AE VFS +V++ + WN ++A+Y ++
Sbjct: 299 VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSAL 358
Query: 364 ----------------------------------------------QSDVVVASSIVDMY 377
QS + S+++ +Y
Sbjct: 359 DLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLY 418
Query: 378 AKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQ------------ 425
+KC +A VF S+ +D+V W +L++ G+ EA ++F M+
Sbjct: 419 SKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDI 478
Query: 426 ----------LE---------------GISPNIISWNSVILGFLRNGQMNEAKDMFLQMQ 460
LE G+ N+ +S+I + + G A +F M
Sbjct: 479 MTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS 538
Query: 461 SLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLR 520
+ N++ W ++IS ++N+ +I F ML GI P + +IT L A + ASL
Sbjct: 539 T----ENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLL 594
Query: 521 NGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYA 580
G+++HGY +R + T + +L+DMY KCG A+ +F K L +N MI GY
Sbjct: 595 KGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYG 654
Query: 581 MHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSM 640
HG + AL+LF +++ G PD +TF ++++AC+H+G V EG +F M D+ ++P+M
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNM 714
Query: 641 EHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQ 700
EH+ +V+LL R G L+EA I MP + D+ I LLS + EL +E LL+
Sbjct: 715 EHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLR 774
Query: 701 LEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDR 760
+EP+ YV L N Y +G NE +++ +MKEKGL K PGCSWI++ + +VF +
Sbjct: 775 MEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGS 834
Query: 761 SHPKTEEIYATLALL 775
S P EI+ L L
Sbjct: 835 SSPMKAEIFNVLNRL 849
Score = 225 bits (574), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 165/586 (28%), Positives = 282/586 (48%), Gaps = 113/586 (19%)
Query: 174 QEDGVSP---DNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKC 230
+ DG SP F P++LKAC AL + +G+ +HG V+ +G+ F+A+SL++MY KC
Sbjct: 49 KHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKC 108
Query: 231 GDLEEARKVFD-------GMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTR 283
G L+ A +VFD G+ AR+V WNSMI GY + +E + F M + GV P
Sbjct: 109 GFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDA 168
Query: 284 VS---VTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVV 340
S V S++ N +EGKQ H + N ++ D+ L +++I+ Y K GL DA V
Sbjct: 169 FSLSIVVSVMCKEGNFRR-EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRV 227
Query: 341 FSRMVER-DIVTWNLLIASYVQSG------------------------------------ 363
F + ++ ++V WN++I + SG
Sbjct: 228 FVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSEN 287
Query: 364 ----------------QSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAA 407
+D V +S++ MY+KC + A+ VF+ ++ + + +WN ++AA
Sbjct: 288 SGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAA 347
Query: 408 YADLGRSGEASRLFYQMQLEGISPNIISWNSVI-----LGFLRNGQMNEAK--------- 453
YA+ A LF M+ + + P+ + ++VI LG G+ A+
Sbjct: 348 YAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQST 407
Query: 454 ------------------DMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEML 495
D +L +S+ + +++ W +LISGL +N EA+ F +M
Sbjct: 408 STIESALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKVFGDMK 466
Query: 496 --ETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGN 553
+ +KP + +T +AC + +LR G +HG +I+ L L + +SL+D+Y+KCG
Sbjct: 467 DDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGL 526
Query: 554 IHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNA 613
A +VF ++ + +N+MIS Y+ + L ++ LF + +GI PDS++ T++L A
Sbjct: 527 PEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVA 586
Query: 614 CSHA-----GLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCG 654
S G G L +G+ SD +K ++ +++ +CG
Sbjct: 587 ISSTASLLKGKSLHGYTLRLGIPSDTHLKNAL------IDMYVKCG 626
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 335 bits (859), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 200/670 (29%), Positives = 327/670 (48%), Gaps = 98/670 (14%)
Query: 202 RAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGM-IARNVVAWNSMIVGYVQ 260
+ VH +L +G V + SLI++Y C D AR VF+ I +V WNS++ GY +
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 261 NGLNEEAIRVFYEM-TLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNV 319
N + + + VF + P + +++ A L G+ H + V +G D V
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 320 LGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQS-------------- 365
+ SS++ Y+K L E++ VF M ERD+ +WN +I+ + QSG++
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 366 --------------------------------------DVVVASSIVDMYAKCERIDNAK 387
D V S++VDMY KC+ ++ A+
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR 263
Query: 388 QVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILG----- 442
+VF + + +V WN+++ Y G S + +M +EG P+ + S+++
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSR 323
Query: 443 ------------------------------FLRNGQMNEAKDMFLQMQSLGVQPNLITWT 472
+ + G+ N A+ +F + Q + +W
Sbjct: 324 NLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE----SWN 379
Query: 473 TLISGLTQNSCGN--EAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLI 530
+IS S GN +A+ + +M+ G+KP T T L AC+ +A+L G+ IH +
Sbjct: 380 VMISSYI--SVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS 437
Query: 531 RHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALA 590
L ++++L+DMY+KCGN +A R+F+ P K++ + MIS Y HG EAL
Sbjct: 438 ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 497
Query: 591 LFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLL 650
F +Q+ G+ PD +T +L+AC HAGL++EGL+ F M S + ++P +EH+ C++++L
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 651 SRCGNLDEALRVILTMPCDPD-AHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNY 709
R G L EA +I P D A ++ +L S C E L + I+ L++ PD+ Y
Sbjct: 558 GRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTY 617
Query: 710 VALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEIY 769
+ L N YA+ W+ +VR MKE GLRK PGCSWI++ +++ F A DRSH + E +Y
Sbjct: 618 MVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVY 677
Query: 770 ATLALLGMHV 779
LALL H+
Sbjct: 678 ECLALLSGHM 687
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 236/458 (51%), Gaps = 35/458 (7%)
Query: 96 YTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIG 155
+ G+ IH ++K+G + + V + LV YAK + + + ++F + ++V SW +I
Sbjct: 124 FLGRMIHTLVVKSG--YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVIS 181
Query: 156 LNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDG 215
+ G +EKAL F M+ G P++ L + AC L W+ G+ +H +K GF+
Sbjct: 182 CFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL 241
Query: 216 CVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMT 275
+V S+L+DMYGKC LE AR+VF M +++VAWNSMI GYV G ++ + + M
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 276 LEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLE 335
+EG P++ ++TSIL A + L GK H + + + D + S+I+ Y K G
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEAN 361
Query: 336 DAEVVFSRMVERDIV-TWNLLIASYVQSG-----------------QSDVVVASSIVDMY 377
AE VFS+ ++D+ +WN++I+SY+ G + DVV +S++
Sbjct: 362 LAETVFSK-TQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 378 AKCERIDNAKQVFNSI----ILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNI 433
++ ++ KQ+ SI + D +L + LL Y+ G EA R+F + ++
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP----KKDV 476
Query: 434 ISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQE 493
+SW +I + +GQ EA F +MQ G++P+ +T ++S +E + FF +
Sbjct: 477 VSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ 536
Query: 494 ML-ETGIKPSTTTITCALSACTDVASLRNGRAIHGYLI 530
M + GI+P +C + D+ R GR + Y I
Sbjct: 537 MRSKYGIEPIIEHYSCMI----DILG-RAGRLLEAYEI 569
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 25/237 (10%)
Query: 510 LSACTD-VASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFD-ISPSK 567
L CT+ SLR + +H ++ L + SL+++Y C + A+ VF+
Sbjct: 10 LRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRS 69
Query: 568 ELPVYNAMISGYAMHGLAVEALALFKNLQQKGI-DPDSITFTNILNACSHAGLVNEGLEL 626
++ ++N+++SGY+ + + + L +FK L I PDS TF N++ A + L E L
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA--YGALGREFLGR 127
Query: 627 FV-------GMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLL 679
+ G D V S+ V + ++ + +L+V MP + D +++
Sbjct: 128 MIHTLVVKSGYVCDVVVASSL------VGMYAKFNLFENSLQVFDEMP-ERDVASWNTVI 180
Query: 680 STCVKSNETELAEYISEHLLQ--LEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKE 734
S +S E E A + + EP N V+L+ A +A R + + ++I ++
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEP----NSVSLTVAISACSRLLWLERGKEIHRK 233
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 334 bits (856), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/642 (30%), Positives = 331/642 (51%), Gaps = 97/642 (15%)
Query: 200 FGRAVHGYVLKVGFD-GCVFVASSLIDMYGKCGDLEEARKVFDGMIAR--NVVAWNSMIV 256
G+ +H ++LK V +L +Y C ++E AR VFD + N +AW+ MI
Sbjct: 17 LGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIR 76
Query: 257 GYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMEL 316
Y N E+A+ ++Y+M GV PT+ + +L A A L A+D+GK H+ +
Sbjct: 77 AYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFAT 136
Query: 317 DNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASY----------------- 359
D + +++++FY+K G LE A VF M +RD+V WN +I+ +
Sbjct: 137 DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMR 196
Query: 360 ------------------------VQSGQS------------DVVVASSIVDMYAKCERI 383
++ G++ D+VV + I+D+YAK + I
Sbjct: 197 RIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCI 256
Query: 384 DNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQM----QLEGISPNIISWNSV 439
A++VF+ ++ V W+ ++ Y + EA +F+QM + ++P ++ +
Sbjct: 257 IYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLI 314
Query: 440 ILGFLRNGQMNEAK--------------------------------DMFLQMQSLGVQPN 467
++G R G ++ + D F Q +G++ +
Sbjct: 315 LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK-D 373
Query: 468 LITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHG 527
+I++ +LI+G N E+ F EM +GI+P TT+ L+AC+ +A+L +G + HG
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 528 YLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVE 587
Y + H + T I +L+DMY KCG + AKRVFD +++ +N M+ G+ +HGL E
Sbjct: 434 YCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKE 493
Query: 588 ALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMF-SDHQVKPSMEHFGCV 646
AL+LF ++Q+ G++PD +T IL+ACSH+GLV+EG +LF M D V P ++H+ C+
Sbjct: 494 ALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCM 553
Query: 647 VNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNP 706
+LL+R G LDEA + MP +PD ++G+LLS C EL +S+ + L +
Sbjct: 554 TDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETT 612
Query: 707 GNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQI 748
+ V LSN Y+A+ RW + +++R I K++GL K PG SW+ +
Sbjct: 613 ESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 145/259 (55%), Gaps = 10/259 (3%)
Query: 51 ISSLSKEKQIREAVDLLTEMKCRN--FQIGPEIYGELLQGCVYKRDMYTGQQIHARILKN 108
I + + I+EA ++ +M + + P G +L GC D+ G+ +H +K
Sbjct: 278 IGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKA 337
Query: 109 GDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIG---LNCRVGLSEK 165
G F + V+ ++ FYAK +L A R F + +K+V S+ ++I +NCR E+
Sbjct: 338 G--FILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCR---PEE 392
Query: 166 ALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLID 225
+ F EM+ G+ PD L VL AC L +G G + HGY + G+ + ++L+D
Sbjct: 393 SFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMD 452
Query: 226 MYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVS 285
MY KCG L+ A++VFD M R++V+WN+M+ G+ +GL +EA+ +F M GV P V+
Sbjct: 453 MYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVT 512
Query: 286 VTSILSASANLDALDEGKQ 304
+ +ILSA ++ +DEGKQ
Sbjct: 513 LLAILSACSHSGLVDEGKQ 531
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 334 bits (856), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/505 (36%), Positives = 284/505 (56%), Gaps = 63/505 (12%)
Query: 322 SSIINFYSKVGLLEDAEVVFSRM----VERDIVTWNLLIA-----SYVQSGQ-------- 364
++II YS+ +DA +++S M V D T+ L+ S++Q G+
Sbjct: 88 NAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFR 147
Query: 365 ----SDVVVASSIVDMYAKCERIDNAKQVFNSIIL--RDVVLWNTLLAAYADLGRSGEAS 418
+DV V + ++ +YAKC R+ +A+ VF + L R +V W +++AYA G EA
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 419 RLFYQMQLEGISPNIISWNSVILGFL---------------------------------- 444
+F QM+ + P+ ++ SV+ F
Sbjct: 208 EIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 445 -RNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPST 503
+ GQ+ AK +F +M+S PNLI W +ISG +N EAI F EM+ ++P T
Sbjct: 268 AKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDT 323
Query: 504 TTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDI 563
+IT A+SAC V SL R+++ Y+ R D I ++L+DM+AKCG++ A+ VFD
Sbjct: 324 ISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR 383
Query: 564 SPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEG 623
+ +++ V++AMI GY +HG A EA++L++ +++ G+ P+ +TF +L AC+H+G+V EG
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 624 LELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCV 683
F M +DH++ P +H+ CV++LL R G+LD+A VI MP P + G+LLS C
Sbjct: 444 WWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK 502
Query: 684 KSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGC 743
K EL EY ++ L ++P N G+YV LSN YAA+ W+ V++VR MKEKGL K+ GC
Sbjct: 503 KHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGC 562
Query: 744 SWIQIGEELHVFVACDRSHPKTEEI 768
SW+++ L F D+SHP+ EEI
Sbjct: 563 SWVEVRGRLEAFRVGDKSHPRYEEI 587
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/536 (27%), Positives = 251/536 (46%), Gaps = 70/536 (13%)
Query: 81 IYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFC 140
Y L+ +K + +QIHAR+L G F+ ++ TKL+ + + A ++F
Sbjct: 23 FYASLIDSATHKAQL---KQIHARLLVLGLQFS--GFLITKLIHASSSFGDITFARQVFD 77
Query: 141 RLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGF 200
L +F W AII R + AL+ + MQ VSPD+F P++LKAC L +
Sbjct: 78 DLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQM 137
Query: 201 GRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDG--MIARNVVAWNSMIVGY 258
GR VH V ++GFD VFV + LI +Y KC L AR VF+G + R +V+W +++ Y
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 259 VQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDN 318
QNG EA+ +F +M V+P V++ S+L+A L L +G+ HA V G+E++
Sbjct: 198 AQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP 257
Query: 319 VLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSG--------------- 363
L S+ Y+K G + A+++F +M +++ WN +I+ Y ++G
Sbjct: 258 DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 364 -------------------------------------QSDVVVASSIVDMYAKCERIDNA 386
+ DV ++S+++DM+AKC ++ A
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 387 KQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRN 446
+ VF+ + RDVV+W+ ++ Y GR+ EA L+ M+ G+ PN +++ +++ +
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
Query: 447 GQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTI 506
G + E F +M + P + +I L + ++A + M ++P T
Sbjct: 438 GMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM---PVQPGVTVW 494
Query: 507 TCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFD 562
LSAC + G L D S Y + N++ A R++D
Sbjct: 495 GALLSACKKHRHVELGEYAAQQLFSID--------PSNTGHYVQLSNLYAAARLWD 542
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 224/471 (47%), Gaps = 23/471 (4%)
Query: 51 ISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGD 110
I S+ ++A+ + + M+ + LL+ C + G+ +HA++ + G
Sbjct: 91 IRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG- 149
Query: 111 FFARNEYVETKLVVFYAKCDALDVASRLFCRLRV--KNVFSWAAIIGLNCRVGLSEKALI 168
F + +V+ L+ YAKC L A +F L + + + SW AI+ + G +AL
Sbjct: 150 -FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 169 GFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYG 228
F +M++ V PD L +VL A L + GR++H V+K+G + + SL MY
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 229 KCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTS 288
KCG + A+ +FD M + N++ WN+MI GY +NG EAI +F+EM + V P +S+TS
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 289 ILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERD 348
+SA A + +L++ + + + D + S++I+ ++K G +E A +VF R ++RD
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRD 388
Query: 349 IVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAY 408
+V W+ +I Y G+ A + +Y ER + DV L+A
Sbjct: 389 VVVWSAMIVGYGLHGR-----AREAISLYRAMER--------GGVHPNDVTFLGLLMACN 435
Query: 409 ADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNL 468
G E F +M I+P + VI R G +++A ++ ++ + VQP +
Sbjct: 436 HS-GMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEV---IKCMPVQPGV 491
Query: 469 ITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASL 519
W L+S ++ Q++ I PS T LS A L
Sbjct: 492 TVWGALLSACKKHRHVELGEYAAQQLFS--IDPSNTGHYVQLSNLYAAARL 540
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 208/605 (34%), Positives = 332/605 (54%), Gaps = 28/605 (4%)
Query: 170 FVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGK 229
F +M E V D +L + + G+ VH LK+G D + V++SLI+MY K
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 230 CGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSI 289
AR VFD M R++++WNS+I G QNGL EA+ +F ++ G++P + ++TS+
Sbjct: 363 LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSV 422
Query: 290 LSASANL-DALDEGKQAHAVAV-INGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVER 347
L A+++L + L KQ H A+ IN + D+ + +++I+ YS+ +++AE++F R
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVS-DSFVSTALIDAYSRNRCMKEAEILFERH-NF 480
Query: 348 DIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDN--AKQVFNSIILRDVVLWNTLL 405
D+V WN ++A Y QS + + M+ + ER D+ VF + + +
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFAL-MHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 406 AAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQ 465
AYA +SG Y + L +S I+ +++ G M+ A+ F S+ V
Sbjct: 540 HAYAI--KSG------YDLDL-WVSSGILDM------YVKCGDMSAAQFAF---DSIPV- 580
Query: 466 PNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAI 525
P+ + WTT+ISG +N A F +M G+ P TI A + + +L GR I
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 526 HGYLIRHDLCLPTPIV-TSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGL 584
H ++ + C P V TSLVDMYAKCG+I A +F + +NAM+ G A HG
Sbjct: 641 HANALKLN-CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 585 AVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFG 644
E L LFK ++ GI PD +TF +L+ACSH+GLV+E + M D+ +KP +EH+
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYS 759
Query: 645 CVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPD 704
C+ + L R G + +A +I +M + A + +LL+ C +TE + ++ LL+LEP
Sbjct: 760 CLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPL 819
Query: 705 NPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPK 764
+ YV LSN YAA+ +W+E+ R +MK ++K+PG SWI++ ++H+FV DRS+ +
Sbjct: 820 DSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQ 879
Query: 765 TEEIY 769
TE IY
Sbjct: 880 TELIY 884
Score = 209 bits (532), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 163/647 (25%), Positives = 294/647 (45%), Gaps = 91/647 (14%)
Query: 85 LLQGCVYKRDMYTGQQIHARILKNGDFFARN--EYVETKLVVFYAKCDALDVASRLFCRL 142
L+ + D+ G+ HARIL F N ++ L+ Y+KC +L A R+F ++
Sbjct: 45 FLRNAITSSDLMLGKCTHARILT----FEENPERFLINNLISMYSKCGSLTYARRVFDKM 100
Query: 143 RVKNVFSWAAIIGL-----NCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGW 197
+++ SW +I+ C V ++A + F +++D V L +LK C G+
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160
Query: 198 VGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVG 257
V + HGY K+G DG FVA +L+++Y K G ++E + +F+ M R+VV WN M+
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 258 YVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELD 317
Y++ G EEAI + G+ P +++ + S D+ + NG +
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISG-----DDSDAGQVKSFANGNDAS 275
Query: 318 NVLGSSII------NFYSKVGLLEDAEVVFSRMVERDI----VTWNLLIASYVQS----- 362
+V S II + Y G F+ MVE D+ VT+ L++A+ V+
Sbjct: 276 SV--SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLAL 333
Query: 363 GQS------------DVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYAD 410
GQ + V++S+++MY K + A+ VF+++ RD++ WN+++A A
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 411 LGRSGEASRLFYQMQLEGISPNIISWNSV------------------------------- 439
G EA LF Q+ G+ P+ + SV
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 440 -----ILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEM 494
I + RN M EA+ +F + +L+ W +++G TQ+ G++ + F M
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFERHNF-----DLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 495 LETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNI 554
+ G + T+ C + ++ G+ +H Y I+ L + + ++DMY KCG++
Sbjct: 509 HKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 568
Query: 555 HQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNAC 614
A+ FD P + + MISG +G A +F ++ G+ PD T + A
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKAS 628
Query: 615 SHAGLVNEGLELFVGMFSDHQVKPSMEHF--GCVVNLLSRCGNLDEA 659
S + +G ++ ++ + + F +V++ ++CG++D+A
Sbjct: 629 SCLTALEQGRQIHANAL---KLNCTNDPFVGTSLVDMYAKCGSIDDA 672
Score = 166 bits (420), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 193/380 (50%), Gaps = 21/380 (5%)
Query: 99 QQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNC 158
+Q+H +K + + +V T L+ Y++ + A LF R ++ +W A++
Sbjct: 437 KQVHVHAIKINN--VSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYT 493
Query: 159 RVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVF 218
+ K L F M + G D+F L V K CG L + G+ VH Y +K G+D ++
Sbjct: 494 QSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLW 553
Query: 219 VASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEG 278
V+S ++DMY KCGD+ A+ FD + + VAW +MI G ++NG E A VF +M L G
Sbjct: 554 VSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG 613
Query: 279 VEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAE 338
V P ++ ++ AS+ L AL++G+Q HA A+ D +G+S+++ Y+K G ++DA
Sbjct: 614 VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Query: 339 VVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDV 398
+F R+ +I WN ++ Q G+ E + KQ+ + I D
Sbjct: 674 CLFKRIEMMNITAWNAMLVGLAQHGEGK--------------ETLQLFKQMKSLGIKPDK 719
Query: 399 VLWNTLLAAYADLGRSGEASRLFYQMQLE-GISPNIISWNSVILGFLRNGQMNEAKDMFL 457
V + +L+A + G EA + M + GI P I ++ + R G + +A+++
Sbjct: 720 VTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL-- 777
Query: 458 QMQSLGVQPNLITWTTLISG 477
++S+ ++ + + TL++
Sbjct: 778 -IESMSMEASASMYRTLLAA 796
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 332 bits (851), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 196/632 (31%), Positives = 323/632 (51%), Gaps = 89/632 (14%)
Query: 233 LEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSA 292
+E+A ++FD M + WN MI G+ GL EA++ + M GV+ + ++ +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 293 SANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTW 352
A + +L+EGK+ HA+ + G D + +S+I+ Y K+G DAE VF M ERDIV+W
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 353 NLLIASYVQSGQS----------------------------------------------- 365
N +I+ Y+ G
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 366 ------DVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASR 419
DV+V +SI+DMY+K + A+++FN +I R++V WN ++ YA GR +A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 420 LFYQM-QLEGISPNIISW-----NSVIL------------GFLRN--------------G 447
F +M + G+ P++I+ S IL GFL + G
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECG 379
Query: 448 QMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTIT 507
Q+ A+ +F +M + N+I+W ++I+ QN A+ FQE+ ++ + P +TTI
Sbjct: 380 QLKSAEVIFDRM----AEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 508 CALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSK 567
L A + SL GR IH Y+++ T I+ SLV MYA CG++ A++ F+ K
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 568 ELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELF 627
++ +N++I YA+HG ++ LF + ++P+ TF ++L ACS +G+V+EG E F
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555
Query: 628 VGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNE 687
M ++ + P +EH+GC+++L+ R GN A R + MP P A I GSLL+ +
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKD 615
Query: 688 TELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQ 747
+AE+ +E + ++E DN G YV L N YA +GRW +V++++ +M+ KG+ + S ++
Sbjct: 616 ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVE 675
Query: 748 IGEELHVFVACDRSHPKTEEIYATLALLGMHV 779
+ HVF DRSH T +IY L ++ V
Sbjct: 676 AKGKSHVFTNGDRSHVATNKIYEVLDVVSRMV 707
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 149/563 (26%), Positives = 267/563 (47%), Gaps = 69/563 (12%)
Query: 62 EAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETK 121
EAV + M + Y +++ + G++IHA ++K G F + YV
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLG--FVSDVYVCNS 170
Query: 122 LVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPD 181
L+ Y K A ++F + +++ SW ++I +G +L+ F EM + G PD
Sbjct: 171 LISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPD 230
Query: 182 NFVLPNVLKACGALGWVGFGRAVHGYVLKVGFD-GCVFVASSLIDMYGKCGDLEEARKVF 240
F + L AC + G+ +H + ++ + G V V +S++DMY K G++ A ++F
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIF 290
Query: 241 DGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLE-GVEPTRVSVTSILSASANLDAL 299
+GMI RN+VAWN MI Y +NG +A F +M+ + G++P ++ ++L ASA L
Sbjct: 291 NGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL--- 347
Query: 300 DEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASY 359
EG+ H A+ G VL +++I+ Y + G L+ AEV+F RM E+++++WN +IA+Y
Sbjct: 348 -EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAY 406
Query: 360 VQSGQ----------------------------------------------------SDV 367
VQ+G+ S+
Sbjct: 407 VQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNT 466
Query: 368 VVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLE 427
++ +S+V MYA C +++A++ FN I+L+DVV WN+++ AYA G + LF +M
Sbjct: 467 IILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS 526
Query: 428 GISPNIISWNSVILGFLRNGQMNEAKDMFLQMQ-SLGVQPNLITWTTLISGLTQNSCGNE 486
++PN ++ S++ +G ++E + F M+ G+ P + + ++ + + +
Sbjct: 527 RVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSA 586
Query: 487 AILFFQEMLETGIKPSTTTITCALSACTDVASLRNGR--AIHGYLIRHDLCLPTPIVTSL 544
A F +EM P+ L+A + + A + + HD T L
Sbjct: 587 AKRFLEEM---PFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHD---NTGCYVLL 640
Query: 545 VDMYAKCGNIHQAKRVFDISPSK 567
++MYA+ G R+ + SK
Sbjct: 641 LNMYAEAGRWEDVNRIKLLMESK 663
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 163/342 (47%), Gaps = 33/342 (9%)
Query: 98 GQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLN 157
G+ IH ++ G F + +ET L+ Y +C L A +F R+ KNV SW +II
Sbjct: 349 GRTIHGYAMRRG--FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAY 406
Query: 158 CRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCV 217
+ G + AL F E+ + + PD+ + ++L A + GR +H Y++K +
Sbjct: 407 VQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNT 466
Query: 218 FVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLE 277
+ +SL+ MY CGDLE+ARK F+ ++ ++VV+WNS+I+ Y +G ++ +F EM
Sbjct: 467 IILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS 526
Query: 278 GVEPTRVSVTSILSASANLDALDEGKQ-----AHAVAVINGME----LDNVLGSSIINFY 328
V P + + S+L+A + +DEG + + G+E + +++G + NF
Sbjct: 527 RVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRT-GNFS 585
Query: 329 SKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQ 388
+ LE+ V + + W L+ + D+ +A + K E +
Sbjct: 586 AAKRFLEEMPFVPTARI------WGSLLNA--SRNHKDITIAEFAAEQIFKMEHDNTGCY 637
Query: 389 VFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGIS 430
V LL YA+ GR + +R+ M+ +GIS
Sbjct: 638 VL-------------LLNMYAEAGRWEDVNRIKLLMESKGIS 666
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 332 bits (851), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 208/722 (28%), Positives = 339/722 (46%), Gaps = 137/722 (18%)
Query: 184 VLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGM 243
+ P + C + V + +H +L G + + S LI Y G L A +
Sbjct: 30 ITPPFIHKCKTISQV---KLIHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRF 85
Query: 244 IARN--VVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDE 301
+ V WNS+I Y NG + + +F M P + + A + ++
Sbjct: 86 PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 302 GKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQ 361
G+ AHA++++ G + +G++++ YS+ L DA VF M D+V+WN +I SY +
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 362 SGQSDVV----------------------------------------------------- 368
G+ V
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 369 VASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLE- 427
V + +VDMYAKC +D A VF+++ ++DVV WN ++A Y+ +GR +A RLF +MQ E
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 428 ----------------------------------GISPNIISWNSVILG----------- 442
GI PN ++ SV+ G
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 443 ------------FLRNGQ------MNEAKDMFLQMQSLGV-----------QPNLITWTT 473
+NG +N+ DM+ + + + + +++TWT
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 474 LISGLTQNSCGNEAILFFQEMLETG--IKPSTTTITCALSACTDVASLRNGRAIHGYLIR 531
+I G +Q+ N+A+ EM E +P+ TI+CAL AC +A+LR G+ IH Y +R
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 532 HDL-CLPTPIVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALA 590
+ +P + L+DMYAKCG+I A+ VFD +K + ++++GY MHG EAL
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 591 LFKNLQQKGIDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLL 650
+F +++ G D +T +L ACSH+G++++G+E F M + V P EH+ C+V+LL
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLL 625
Query: 651 SRCGNLDEALRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYV 710
R G L+ ALR+I MP +P + + LS C + EL EY +E + +L ++ G+Y
Sbjct: 626 GRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYT 685
Query: 711 ALSNAYAASGRWNEVSQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACDRSHPKTEEIYA 770
LSN YA +GRW +V+++R +M+ KG++K PGCSW++ + F D++HP +EIY
Sbjct: 686 LLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQ 745
Query: 771 TL 772
L
Sbjct: 746 VL 747
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 193/576 (33%), Positives = 289/576 (50%), Gaps = 55/576 (9%)
Query: 202 RAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQN 261
R VH ++ + L+ Y D+ ARKVFD + RNV+ N MI YV N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 262 GLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLG 321
G E ++VF M V P + +L A + + G++ H A
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA------------ 166
Query: 322 SSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCE 381
+KVGL S + V + +V MY KC
Sbjct: 167 -------TKVGL------------------------------SSTLFVGNGLVSMYGKCG 189
Query: 382 RIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVIL 441
+ A+ V + + RDVV WN+L+ YA R +A + +M+ IS + + S++
Sbjct: 190 FLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP 249
Query: 442 GFLRNGQMN--EAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGI 499
N KDMF +M + +L++W +I +N+ EA+ + M G
Sbjct: 250 AVSNTTTENVMYVKDMFFKMG----KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGF 305
Query: 500 KPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKR 559
+P +IT L AC D ++L G+ IHGY+ R L + +L+DMYAKCG + +A+
Sbjct: 306 EPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARD 365
Query: 560 VFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGL 619
VF+ S+++ + AMIS Y G +A+ALF LQ G+ PDSI F L ACSHAGL
Sbjct: 366 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGL 425
Query: 620 VNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILTMPCDPDAHIIGSLL 679
+ EG F M +++ P +EH C+V+LL R G + EA R I M +P+ + G+LL
Sbjct: 426 LEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL 485
Query: 680 STCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRK 739
C ++T++ ++ L QL P+ G YV LSN YA +GRW EV+ +R+IMK KGL+K
Sbjct: 486 GACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKK 545
Query: 740 NPGCSWIQIGEELHVFVACDRSHPKTEEIYATLALL 775
NPG S +++ +H F+ DRSHP+++EIY L +L
Sbjct: 546 NPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVL 581
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 233/507 (45%), Gaps = 48/507 (9%)
Query: 94 DMYTGQQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAI 153
D+ T + +H+RI+ N + KL+ YA + A ++F + +NV +
Sbjct: 54 DIRTLRTVHSRIILED--LRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVM 111
Query: 154 IGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGF 213
I G + + F M V PD++ P VLKAC G + GR +HG KVG
Sbjct: 112 IRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGL 171
Query: 214 DGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYE 273
+FV + L+ MYGKCG L EAR V D M R+VV+WNS++VGY QN ++A+ V E
Sbjct: 172 SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCRE 231
Query: 274 MTLEGVEPTRVSVTSILSASANLDA----------LDEGKQAH-AVAVINGMELDNVLGS 322
M + ++ S+L A +N GK++ + V+ G+ + N +
Sbjct: 232 MESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV 291
Query: 323 SIINFYSKV---GLLEDAEVVFSRMV---ERDIVTWNLLIASYVQSGQ--SDVVVASSIV 374
+ YS++ G DA + S + + ++ I Y++ + ++++ ++++
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 375 DMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNII 434
DMYAKC ++ A+ VF ++ RDVV W +++AY GR +A LF ++Q G+ P+ I
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 435 SWNSVILGFLRNGQMNEAKDMF-LQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQE 493
++ + + G + E + F L + P L ++ L + EA F Q+
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 494 MLETGIKPSTTTITCALSAC-----TDVASLRNGRAIH------GYLIRHDLCLPTPIVT 542
M ++P+ L AC TD+ L + GY +
Sbjct: 472 M---SMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVL----------- 517
Query: 543 SLVDMYAKCGNIHQAKRVFDISPSKEL 569
L ++YAK G + + +I SK L
Sbjct: 518 -LSNIYAKAGRWEEVTNIRNIMKSKGL 543
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 62 EAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETK 121
EAV+L + M+ F+ +L C + G++IH I + N +E
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK--LIPNLLLENA 349
Query: 122 LVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPD 181
L+ YAKC L+ A +F ++ ++V SW A+I G A+ F ++Q+ G+ PD
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPD 409
Query: 182 NFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVA-----SSLIDMYGKCGDLEEA 236
+ L AC G + GR+ K+ D + ++D+ G+ G ++EA
Sbjct: 410 SIAFVTTLAACSHAGLLEEGRS----CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 237 -RKVFDGMIARNVVAWNSMI 255
R + D + N W +++
Sbjct: 466 YRFIQDMSMEPNERVWGALL 485
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 330 bits (845), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 195/685 (28%), Positives = 362/685 (52%), Gaps = 22/685 (3%)
Query: 84 ELLQGCVYKRDMYTGQQIHARILKNGDFFA-RNEYVETKLVVFYAKCDALDVASRLFCRL 142
EL + CV + +QIHA +L G A + Y L+ Y +C +L+ A ++F ++
Sbjct: 99 ELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKM 158
Query: 143 RVKNVFSWAAIIGLNCR-VGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFG 201
+NV S+ A+ R + A M + V P++ ++++ C L V G
Sbjct: 159 PHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMG 218
Query: 202 RAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQN 261
+++ ++K+G+ V V +S++ MY CGDLE AR++FD + R+ VAWN+MIVG ++N
Sbjct: 219 SSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278
Query: 262 GLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLG 321
E+ + F M + GV+PT+ + + +L+ + L + GK HA +++ D L
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD 338
Query: 322 SSIINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCE 381
+++++ Y G + +A VF R+ ++V+WN +I SG S+ + MY +
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSII-----SGCSENGFGEQAMLMYRRLL 393
Query: 382 RIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVIL 441
R+ + D ++ ++A A+ R L Q+ G ++ +++
Sbjct: 394 RMSTPRP--------DEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLS 445
Query: 442 GFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKP 501
+ +N + A+ +F M+ + +++ WT +I G ++ A+ FF EM +
Sbjct: 446 MYFKNREAESAQKVFDVMK----ERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRS 501
Query: 502 STTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVF 561
+++ + AC+D+A LR G H IR + +LVDMY K G A+ +F
Sbjct: 502 DGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIF 561
Query: 562 DISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSITFTNILNACSHAGLVN 621
++ + +L +N+M+ Y+ HG+ +AL+ F+ + + G PD++T+ ++L ACSH G
Sbjct: 562 SLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTL 621
Query: 622 EGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVI-LTMPCDPDAHIIGSLLS 680
+G L+ M + +K +H+ C+VNL+S+ G +DEAL +I + P + A + +LLS
Sbjct: 622 QGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLS 680
Query: 681 TCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKN 740
CV + ++ Y +E +L+L+P++ ++ LSN YA +GRW +V+++R ++ K+
Sbjct: 681 ACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKD 740
Query: 741 PGCSWIQI-GEELHVFVACDRSHPK 764
PG SWI++ VF + D+S+P+
Sbjct: 741 PGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/531 (24%), Positives = 247/531 (46%), Gaps = 33/531 (6%)
Query: 39 SYESLYKSYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTG 98
SY +LY +Y S A L T M + + L+Q C D+ G
Sbjct: 165 SYNALYSAYSRNPDFASY------AFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMG 218
Query: 99 QQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAAIIGLNC 158
++++I+K G ++ N V+T ++ Y+ C L+ A R+F + ++ +W +I +
Sbjct: 219 SSLNSQIIKLG--YSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSL 276
Query: 159 RVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWVGFGRAVHGYVLKVGFDGCVF 218
+ E L+ F M GV P F VL C LG G+ +H ++ +
Sbjct: 277 KNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP 336
Query: 219 VASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYE-MTLE 277
+ ++L+DMY CGD+ EA VF + N+V+WNS+I G +NG E+A+ ++ + +
Sbjct: 337 LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMS 396
Query: 278 GVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDA 337
P + ++ +SA+A + GK H G E +G+++++ Y K E A
Sbjct: 397 TPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESA 456
Query: 338 EVVFSRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRD 397
+ VF M ERD+V W +I + + G S++ V ++MY + R D
Sbjct: 457 QKVFDVMKERDVVLWTEMIVGHSRLGNSELAV-QFFIEMYREKNRSDGFS---------- 505
Query: 398 VVLWNTLLAAYADLG--RSGEASRLFYQMQLE-GISPNIISWNSVILGFLRNGQMNEAKD 454
++++ A +D+ R GE +F+ + + G + +++ + +NG+ A+
Sbjct: 506 ---LSSVIGACSDMAMLRQGE---VFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET 559
Query: 455 MFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKPSTTTITCALSACT 514
+F SL P+L W +++ +Q+ +A+ FF+++LE G P T L+AC+
Sbjct: 560 IF----SLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACS 615
Query: 515 DVASLRNGRAIHGYLIRHDLCLPTPIVTSLVDMYAKCGNIHQAKRVFDISP 565
S G+ + + + + +V++ +K G + +A + + SP
Sbjct: 616 HRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSP 666
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 140/621 (22%), Positives = 269/621 (43%), Gaps = 107/621 (17%)
Query: 218 FVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWN--SMIVGYVQNG--LNEEAIRV--F 271
+ ++LI MY +C LE+ARKVFD M RN+V S + YV G L+ + I++ F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 272 YEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDN---VLGSSIINFY 328
+ + SV + ++ L +Q HA+ + G +++I+ Y
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 329 SKVGLLEDAEVVFSRMVERDIVTWNLLIASY----------------------------- 359
+ G LE A VF +M R++V++N L ++Y
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 360 -----------------------VQSGQSD-VVVASSIVDMYAKCERIDNAKQVFNSIIL 395
++ G SD VVV +S++ MY+ C +++A+++F+ +
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 396 RDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVILG------------- 442
RD V WNT++ + + F M + G+ P +++ V+ G
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 443 ----------------------FLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQ 480
+ G M EA +F ++ + PNL++W ++ISG ++
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHN----PNLVSWNSIISGCSE 378
Query: 481 NSCGNEAILFFQEMLETGI-KPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTP 539
N G +A+L ++ +L +P T + A+SA + +G+ +HG + +
Sbjct: 379 NGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVF 438
Query: 540 IVTSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKG 599
+ T+L+ MY K A++VFD+ +++ ++ MI G++ G + A+ F + ++
Sbjct: 439 VGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREK 498
Query: 600 IDPDSITFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEA 659
D + ++++ ACS ++ +G E+F + M G +V++ + G + A
Sbjct: 499 NRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA 557
Query: 660 LRVILTMPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQ--LEPDNPGNYVALSNAYA 717
I ++ +PD S+L + E A E +L+ PD Y++L A +
Sbjct: 558 -ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPD-AVTYLSLLAACS 615
Query: 718 ASGRWNEVSQVRDIMKEKGLR 738
G + + + MKE+G++
Sbjct: 616 HRGSTLQGKFLWNQMKEQGIK 636
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 328 bits (842), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 203/648 (31%), Positives = 335/648 (51%), Gaps = 76/648 (11%)
Query: 127 AKCDALDVASRLFCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLP 186
++ ++ A + F L+ K + SW +I+ GL ++A F EM E V
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV-------- 79
Query: 187 NVLKACGALGWVGFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIAR 246
+ W G V GY+ K + EAR VF+ M R
Sbjct: 80 --------VSWNGL---VSGYI--------------------KNRMIVEARNVFELMPER 108
Query: 247 NVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAH 306
NVV+W +M+ GY+Q G+ EA +F+ M E VS T + +D+G+
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGG-----LIDDGRIDK 159
Query: 307 AVAVINGMELDNVLGSS-IINFYSKVGLLEDAEVVFSRMVERDIVTWNLLIASYVQSGQS 365
A + + M + +V+ S+ +I + G +++A ++F M ER++VTW +I Y Q+
Sbjct: 160 ARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNN-- 217
Query: 366 DVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQ 425
R+D A+++F + + V W ++L Y GR +A F M
Sbjct: 218 ----------------RVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP 261
Query: 426 LEGISPNIISWNSVILGFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGN 485
++ +I+ N++I+GF G++++A+ +F M+ + TW +I +
Sbjct: 262 MK----PVIACNAMIVGFGEVGEISKARRVFDLME----DRDNATWRGMIKAYERKGFEL 313
Query: 486 EAILFFQEMLETGIKPSTTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIVTSLV 545
EA+ F +M + G++PS ++ LS C +ASL+ GR +H +L+R + + L+
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLM 373
Query: 546 DMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKNLQQKGIDPDSI 605
MY KCG + +AK VFD SK++ ++N++ISGYA HGL EAL +F + G P+ +
Sbjct: 374 TMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKV 433
Query: 606 TFTNILNACSHAGLVNEGLELFVGMFSDHQVKPSMEHFGCVVNLLSRCGNLDEALRVILT 665
T IL ACS+AG + EGLE+F M S V P++EH+ C V++L R G +D+A+ +I +
Sbjct: 434 TLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIES 493
Query: 666 MPCDPDAHIIGSLLSTCVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEV 725
M PDA + G+LL C + +LAE ++ L + EPDN G YV LS+ A+ +W +V
Sbjct: 494 MTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDV 553
Query: 726 SQVRDIMKEKGLRKNPGCSWIQIGEELHVFVACD-RSHPKTEEIYATL 772
+ VR M+ + K PGCSWI++G+++H+F ++HP+ I L
Sbjct: 554 AVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMML 601
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 166/347 (47%), Gaps = 51/347 (14%)
Query: 49 HQISSLSKEKQIREAVDLLTEMKCRN-----------------------FQIGPEIYGEL 85
+ I L +E ++ EA + EM+ RN F++ PE
Sbjct: 177 NMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE----- 231
Query: 86 LQGCVYKRDMYTGQQIHARILKNGDFFARNEYVETK-------LVVFYAKCDALDVASRL 138
+ V M G + RI +FF E + K ++V + + + A R+
Sbjct: 232 -KTEVSWTSMLLGYTLSGRIEDAEEFF---EVMPMKPVIACNAMIVGFGEVGEISKARRV 287
Query: 139 FCRLRVKNVFSWAAIIGLNCRVGLSEKALIGFVEMQEDGVSPDNFVLPNVLKACGALGWV 198
F + ++ +W +I R G +AL F +MQ+ GV P L ++L C L +
Sbjct: 288 FDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL 347
Query: 199 GFGRAVHGYVLKVGFDGCVFVASSLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGY 258
+GR VH ++++ FD V+VAS L+ MY KCG+L +A+ VFD +++++ WNS+I GY
Sbjct: 348 QYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGY 407
Query: 259 VQNGLNEEAIRVFYEMTLEGVEPTRVSVTSILSASANLDALDEGKQAHAVAVINGMELDN 318
+GL EEA+++F+EM G P +V++ +IL+A + L+EG + + ME
Sbjct: 408 ASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEG-----LEIFESMESKF 462
Query: 319 VLGSSIINFYSKVGLLEDA-------EVVFSRMVERDIVTWNLLIAS 358
+ ++ ++ V +L A E++ S ++ D W L+ +
Sbjct: 463 CVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGA 509
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 130/546 (23%), Positives = 222/546 (40%), Gaps = 100/546 (18%)
Query: 39 SYESLYKSYFHQISSLSKEKQIREAVDLLTEMKCRNFQIGPEIYGELLQGCVYKRDMYTG 98
S+ S+ YF + L KE A L EM RN + L+ G + R +
Sbjct: 50 SWNSIVSGYFS--NGLPKE-----ARQLFDEMSERNVVS----WNGLVSGYIKNRMIVEA 98
Query: 99 QQIHARILKNGDFFARNEYVETKLVVFYAKCDALDVASRLFCRLRVKNVFSWAA------ 152
+ + + + RN T +V Y + + A LF R+ +N SW
Sbjct: 99 RNVFELMPE------RNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLI 152
Query: 153 -------------------------IIGLNCRVGLSEKALIGFVEMQE----------DG 177
+IG CR G ++A + F EM+E G
Sbjct: 153 DDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITG 212
Query: 178 VSPDNFV-----LPNVLKACGALGWVGFGRAVHGYVLKVGFDGC-----------VFVAS 221
+N V L V+ + W + GY L + V +
Sbjct: 213 YRQNNRVDVARKLFEVMPEKTEVSWTSM---LLGYTLSGRIEDAEEFFEVMPMKPVIACN 269
Query: 222 SLIDMYGKCGDLEEARKVFDGMIARNVVAWNSMIVGYVQNGLNEEAIRVFYEMTLEGVEP 281
++I +G+ G++ +AR+VFD M R+ W MI Y + G EA+ +F +M +GV P
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP 329
Query: 282 TRVSVTSILSASANLDALDEGKQAHAVAVINGMELDNVLGSSIINFYSKVGLLEDAEVVF 341
+ S+ SILS A L +L G+Q HA V + D + S ++ Y K G L A++VF
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVF 389
Query: 342 SRMVERDIVTWNLLIASYVQSGQSDVVVASSIVDMYAKCERIDNAKQVFNSIILRDVVLW 401
R +DI+ WN +I+ Y G + E + ++ +S + + V
Sbjct: 390 DRFSSKDIIMWNSIISGYASHGLGE--------------EALKIFHEMPSSGTMPNKVTL 435
Query: 402 NTLLAAYADLGRSGEASRLFYQMQLE-GISPNIISWNSVILGFLRNGQMNEAKDMFLQMQ 460
+L A + G+ E +F M+ + ++P + ++ + R GQ+++A ++ ++
Sbjct: 436 IAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL---IE 492
Query: 461 SLGVQPNLITWTTLISGLTQNSCGNEA-----ILFFQEMLETGIKPSTTTITCALSACTD 515
S+ ++P+ W L+ +S + A LF E G ++I + S D
Sbjct: 493 SMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGD 552
Query: 516 VASLRN 521
VA +R
Sbjct: 553 VAVVRK 558
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/467 (19%), Positives = 188/467 (40%), Gaps = 91/467 (19%)
Query: 382 RIDNAKQVFNSIILRDVVLWNTLLAAYADLGRSGEASRLFYQMQLEGISPNIISWNSVIL 441
+I+ A++ F+S+ + + WN++++ Y G EA +LF +M N++SWN ++
Sbjct: 32 KINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS----ERNVVSWNGLVS 87
Query: 442 GFLRNGQMNEAKDMFLQMQSLGVQPNLITWTTLISGLTQNSCGNEAILFFQEMLETGIKP 501
G+++N + EA+++F M + N+++WT ++ G Q EA F M E
Sbjct: 88 GYIKNRMIVEARNVFELMP----ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER---- 139
Query: 502 STTTITCALSACTDVASLRNGRAIHGYLIRHDLCLPTPIV-------------------- 541
+ + T D + R ++ + D+ T ++
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR 199
Query: 542 -------TSLVDMYAKCGNIHQAKRVFDISPSKELPVYNAMISGYAMHGLAVEALALFKN 594
T+++ Y + + A+++F++ P K + +M+ GY + G +A F+
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEV 259
Query: 595 LQQKGI---------------------------DPDSITFTNILNACSHAGLVNEGLELF 627
+ K + D D+ T+ ++ A G E L+LF
Sbjct: 260 MPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLF 319
Query: 628 VGMFSDHQVKPSMEHFGCVVNLLSRCGNL------DEALRVILTMPCDPDAHIIGSLLST 681
M V+PS F ++++LS C L + ++ D D ++ L++
Sbjct: 320 AQM-QKQGVRPS---FPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTM 375
Query: 682 CVKSNETELAEYISEHLLQLEPDNPGNYVALSNAYAASGRWNEVSQVRDIMKEKGLRKNP 741
VK E A+ + + + + + ++ + YA+ G E ++ M G N
Sbjct: 376 YVKCGELVKAKLVFD---RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNK 432
Query: 742 --------GCSWI-QIGEELHVFVACDRSH---PKTEEIYATLALLG 776
CS+ ++ E L +F + + P E T+ +LG
Sbjct: 433 VTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLG 479
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 285,136,262
Number of Sequences: 539616
Number of extensions: 11891741
Number of successful extensions: 40497
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 27601
Number of HSP's gapped (non-prelim): 2735
length of query: 788
length of database: 191,569,459
effective HSP length: 126
effective length of query: 662
effective length of database: 123,577,843
effective search space: 81808532066
effective search space used: 81808532066
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)