Citrus Sinensis ID: 035504

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170----
Protein Sequence
YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICYLTFL
Secondary Structure (PSIPRED)
cEEEEccccHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHHHHHHcccccEEEccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHcccccccEEEEccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHccEEEEEEccccccccccccHHHHHcccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEHHccccccccHHHHHHHcc
Coil and Loop (DISEMBL)
yavvtgankgiGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKhsgfdsvifhqldvadpatiHSLADFVrsqfgkldilVNNAAIFgvsvdgdalsgfvkdgepikwneivtpTYELAEKCLRtnyygskrmcevlipllqlsdlprivnvssnmgklkntwqGAICYLTFL
Flexible Loop (DISEMBL)
yavvtgankgigyetvrqlasnGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGfvkdgepikwneivtptyELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSsnmgklkntwqgaicYLTFL
Low Complexity Region (SEG)
YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICYLTFL
Disordered region (IsUnstruct)
****TGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICYLTF*
Disordered Region (DISOPRED)
YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA*CYLTFL
Disordered Region (DISEMBL)
YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICYLTFL
Disordered Region (DISPRO)
YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICYLTFL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICYLTFL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	174	2.2.26 [Sep-21-2011]
Q9M2E2	296	(+)-neomenthol dehydrogen	yes	no	0.919	0.540	0.674	2e-57
Q9ZUH5	296	Short-chain dehydrogenase	no	no	0.919	0.540	0.620	6e-54
A4UHT7	311	Salutaridine reductase OS	N/A	no	0.919	0.514	0.587	4e-50
B2X050	314	(+)-neomenthol dehydrogen	N/A	no	0.942	0.522	0.537	1e-48
Q6WAU1	314	(-)-isopiperitenone reduc	N/A	no	0.942	0.522	0.502	2e-38
P48758	277	Carbonyl reductase [NADPH	no	no	0.793	0.498	0.418	5e-23
Q28960	289	Carbonyl reductase [NADPH	yes	no	0.775	0.467	0.430	2e-22
Q3SZD7	277	Carbonyl reductase [NADPH	no	no	0.701	0.440	0.419	4e-22
Q8K354	277	Carbonyl reductase [NADPH	no	no	0.775	0.487	0.417	5e-22
P47727	277	Carbonyl reductase [NADPH	yes	no	0.701	0.440	0.412	2e-21

>sp|Q9M2E2|SDR1_ARATH (+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1

 Score =  221 bits (563), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 112/166 (67%), Positives = 133/166 (80%), Gaps = 6/166 (3%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLD 57
           YAVVTGAN+GIG+E  RQLAS GI VVLT+RDE RGLEAVE LK        S++FHQLD
Sbjct: 8   YAVVTGANRGIGFEICRQLASEGIRVVLTSRDENRGLEAVETLKKELEISDQSLLFHQLD 67

Query: 58  VADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDAL-SGFVKDGEPIKWNEIVTPT 116
           VADPA+I SLA+FV++QFGKLDILVNNA I G+  D +AL +G  K+G   KW+EI+T T
Sbjct: 68  VADPASITSLAEFVKTQFGKLDILVNNAGIGGIITDAEALRAGAGKEG--FKWDEIITET 125

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
           YEL E+C++ NYYG KRMCE  IPLL+LSD PRIVNVSS+MG+LKN
Sbjct: 126 YELTEECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGQLKN 171

Involved in basal resistance against pathogens.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 0EC: 8

>sp|Q9ZUH5|SDR2B_ARATH Short-chain dehydrogenase/reductase 2b OS=Arabidopsis thaliana GN=SDR2b PE=1 SV=1

 Score =  209 bits (533), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 103/166 (62%), Positives = 129/166 (77%), Gaps = 6/166 (3%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLD 57
           YA+VTG N+GIG+E  RQLA+ GI V+LT+RDEK+GLEAVE LK        S++FHQLD
Sbjct: 8   YAIVTGGNRGIGFEICRQLANKGIRVILTSRDEKQGLEAVETLKKELEISDQSIVFHQLD 67

Query: 58  VADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDAL-SGFVKDGEPIKWNEIVTPT 116
           V+DP ++ SLA+FV++ FGKLDIL+NNA + GV  D DAL +G  K+G   KW E +T T
Sbjct: 68  VSDPVSVTSLAEFVKTHFGKLDILINNAGVGGVITDVDALRAGTGKEG--FKWEETITET 125

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
           YELAE+C++ NYYG KRMCE  IPLLQLSD PRI+NVSS MG++KN
Sbjct: 126 YELAEECIKINYYGPKRMCEAFIPLLQLSDSPRIINVSSFMGQVKN 171

Arabidopsis thaliana (taxid: 3702)

>sp|A4UHT7|SALR_PAPBR Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1

 Score =  197 bits (500), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 101/172 (58%), Positives = 126/172 (73%), Gaps = 12/172 (6%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AVVTG NKGIG+E  +QL+S+GI+VVLT RD  RGLEAVEKLK+S  ++V+FHQLDV DP
Sbjct: 15  AVVTGGNKGIGFEICKQLSSSGIMVVLTCRDVTRGLEAVEKLKNSNHENVVFHQLDVTDP 74

Query: 62  -ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKD-----------GEPIKW 109
             T+ SLADF++++FGKLDILVNNA + G SVD D     + D            E  + 
Sbjct: 75  ITTMSSLADFIKARFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEEVVKIYEKPEA 134

Query: 110 NEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLK 161
            E+++ TYELAE+CL+ NYYG K + EVL+PLLQLSD PRIVNVSS+ G LK
Sbjct: 135 QELMSETYELAEECLKINYYGVKSVTEVLLPLLQLSDSPRIVNVSSSTGSLK 186

Involved in biosynthesis of morphinan-type benzylisoquinoline alkaloids. Catalyzes the stereospecific conversion of salutaridine to salutaridinol.

Papaver bracteatum (taxid: 215227)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 4

EC: 8

>sp|B2X050|MNR1_CAPAN (+)-neomenthol dehydrogenase OS=Capsicum annuum GN=MNR1 PE=1 SV=1

 Score =  192 bits (487), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 100/186 (53%), Positives = 132/186 (70%), Gaps = 22/186 (11%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLK-HSGF--DSVIFHQLD 57
           YAVVTG NKGIGYET RQLAS G++VVLT+RDEK+G+EA+E+LK  S F  + ++FHQLD
Sbjct: 10  YAVVTGGNKGIGYETCRQLASKGVVVVLTSRDEKKGIEAIERLKEESNFTDEHILFHQLD 69

Query: 58  VADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDA------LSGFV-------KDG 104
           + DPA+I SL + ++++FG+LDIL+NNA I GV V+GD       L  ++       ++G
Sbjct: 70  IMDPASISSLVNLIKTKFGRLDILINNAGISGVMVEGDVQVLKEILERYISIVFTEDENG 129

Query: 105 EPIKWNEI---VTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLK 161
           E   W +        YEL ++C+ TNYYG+KRM E  IPLLQLS+ PRIVNV+S+MGKLK
Sbjct: 130 EEGGWTKSGPGSVTNYELTKECIETNYYGAKRMTEAFIPLLQLSNSPRIVNVASSMGKLK 189

Query: 162 ---NTW 164
              N W
Sbjct: 190 LLCNKW 195

Involved in basal resistance against pathogens.

Capsicum annuum (taxid: 4072)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 8

>sp|Q6WAU1|IPIPR_MENPI (-)-isopiperitenone reductase OS=Mentha piperita PE=1 SV=1

 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/185 (50%), Positives = 119/185 (64%), Gaps = 21/185 (11%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLD 57
           YA+VTGANKGIG+E  RQLA  GIIV+LT+R+EKRGLEA +KL        + ++FHQLD
Sbjct: 7   YALVTGANKGIGFEICRQLAEKGIIVILTSRNEKRGLEARQKLLKELNVSENRLVFHQLD 66

Query: 58  VADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGD----------------ALSGFV 101
           V D A++ ++A F++S+FGKLDILVNNA + GV + GD                AL    
Sbjct: 67  VTDLASVAAVAVFIKSKFGKLDILVNNAGVSGVEMVGDVSVFNEYIEADFKALQALEAGA 126

Query: 102 KDGEPI--KWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
           K+  P   K N  +   +E A+ C+ TNYYG KR+ + LIPLLQLS  PRIVNVSS+ G 
Sbjct: 127 KEEPPFKPKANGEMIEKFEGAKDCVVTNYYGPKRLTQALIPLLQLSPSPRIVNVSSSFGS 186

Query: 160 LKNTW 164
           L   W
Sbjct: 187 LLLLW 191

Monoterpene synthase that catalyzes the specific reduction of the 1(2)-double bond of (-)-isopiperitenone to produce (+)-cis-isopulegone. Does not catalyze the reverse reaction. Unable to reduce (+)-pulegone, (+)-cis-isopulegone, (-)-menthone or the 1,2-double bond of (-)-carvone. Able to utilize NADH with 20% the efficiency of NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|P48758|CBR1_MOUSE Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3

 Score =  107 bits (266), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 98/165 (59%), Gaps = 27/165 (16%)

Query: 2   AVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGANKGIG+   R L       VVL ARDE+RG  AV+KL+  G  S  FHQLD+ +
Sbjct: 8   ALVTGANKGIGFAITRDLCRKFSGDVVLAARDEERGQTAVQKLQAEGL-SPRFHQLDIDN 66

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAI-FGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           P +I +L DF+  ++G LD+LVNNA I F V+ D                    TP +  
Sbjct: 67  PQSIRALRDFLLKEYGGLDVLVNNAGIAFKVNDD--------------------TPFHIQ 106

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS--NMGKLKN 162
           AE  ++TN++G++ +C+ L+PL++     R+VNVSS  ++  LKN
Sbjct: 107 AEVTMKTNFFGTRDVCKELLPLIKPQG--RVVNVSSMVSLRALKN 149

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q28960|CBR1_PIG Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1 PE=1 SV=3

 Score =  105 bits (262), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 91/158 (57%), Gaps = 23/158 (14%)

Query: 2   AVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGANKGIG+  VR L       VVLTARD  RG  AV++L+  G  S  FHQLD+ D
Sbjct: 8   ALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGL-SPRFHQLDIID 66

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             +I +L DF+R ++G LD+LVNNAAI            F  D          TP +  A
Sbjct: 67  LQSIRALCDFLRKEYGGLDVLVNNAAI-----------AFQLDNP--------TPFHIQA 107

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           E  ++TN+ G++ +C  L+PL++     R+VNVSS  G
Sbjct: 108 ELTMKTNFMGTRNVCTELLPLIKPQG--RVVNVSSTEG 143

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q3SZD7|CBR1_BOVIN Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1

 Score =  103 bits (258), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 85/143 (59%), Gaps = 21/143 (14%)

Query: 2   AVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGANKGIG+  VR L       VVLTARDE RG  AV++L+  G  S +FHQLD+ D
Sbjct: 8   ALVTGANKGIGFVIVRDLCRRFSGDVVLTARDEARGRAAVQQLQAEGL-SPLFHQLDIDD 66

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             +I +L DF+R ++G LD+LVNNA I   + D                    TP +  A
Sbjct: 67  RQSIRALRDFLRKEYGGLDVLVNNAGIAFKTAD-------------------TTPFHIQA 107

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQ 143
           E  ++TN++G++ +C  L+PL++
Sbjct: 108 EVTMKTNFFGTRDVCTELLPLIK 130

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q8K354|CBR3_MOUSE Carbonyl reductase [NADPH] 3 OS=Mus musculus GN=Cbr3 PE=2 SV=1

 Score =  103 bits (258), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 92/158 (58%), Gaps = 23/158 (14%)

Query: 2   AVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGANKGIG+   R L       VVLTARDE RG  AV++L+  G  S  FHQLD+ D
Sbjct: 8   ALVTGANKGIGFAITRDLCRKFSGDVVLTARDEARGRAAVQQLQAEGL-SPRFHQLDIDD 66

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           P +I +L DF+R ++G L++LVNNA I            F  D +P       TP    A
Sbjct: 67  PQSIRALRDFLRKEYGGLNVLVNNAGI-----------AFRMD-DP-------TPFDIQA 107

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           E  L+TN++ ++ +C  L+P+++     R+VN+SS  G
Sbjct: 108 EVTLKTNFFATRNVCTELLPIMKPHG--RVVNISSLQG 143

Has low NADPH-dependent oxidoreductase activity towards 4-benzoylpyridine and menadione (in vitro).

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|P47727|CBR1_RAT Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus GN=Cbr1 PE=1 SV=2

 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 87/143 (60%), Gaps = 21/143 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGANKGIG+  VR L    +  VVLTARDE RG EAV++L+  G  S  FHQLD+ +
Sbjct: 8   ALVTGANKGIGFAIVRDLCRKFLGDVVLTARDESRGHEAVKQLQTEGL-SPRFHQLDIDN 66

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           P +I +L DF+  ++G L++LVNNA I    VD                    TP +  A
Sbjct: 67  PQSIRALRDFLLQEYGGLNVLVNNAGIAFKVVD-------------------PTPFHIQA 107

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQ 143
           E  ++TN++G++ +C+ L+P+++
Sbjct: 108 EVTMKTNFFGTQDVCKELLPIIK 130

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
224064013	296	predicted protein [Populus trichocarpa]	0.965	0.567	0.678	2e-59
255541520	544	carbonyl reductase, putative [Ricinus co	0.931	0.297	0.690	7e-56
15233062	296	(+)-neomenthol dehydrogenase [Arabidopsi	0.919	0.540	0.674	9e-56
334186180	303	(+)-neomenthol dehydrogenase [Arabidopsi	0.919	0.528	0.674	1e-55
359489616	297	PREDICTED: (+)-neomenthol dehydrogenase-	0.965	0.565	0.64	2e-55
225454097	297	PREDICTED: (+)-neomenthol dehydrogenase	0.965	0.565	0.64	7e-55
297817432	296	short-chain dehydrogenase/reductase fami	0.919	0.540	0.668	1e-54
359489600	539	PREDICTED: (+)-neomenthol dehydrogenase	0.959	0.309	0.638	1e-54
297745216	298	unnamed protein product [Vitis vinifera]	0.959	0.560	0.632	1e-54
224144319	290	predicted protein [Populus trichocarpa]	0.931	0.558	0.684	4e-54

>gi|224064013|ref|XP_002301348.1| predicted protein [Populus trichocarpa] gi|222843074|gb|EEE80621.1| predicted protein [Populus trichocarpa]

 Score =  233 bits (595), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/174 (67%), Positives = 138/174 (79%), Gaps = 6/174 (3%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVA 59
           YAVVTGANKGIG+E  RQLAS GI+VVLT+R+EKRGLE+V+KLK SG  D V+FHQLDVA
Sbjct: 8   YAVVTGANKGIGFEICRQLASKGIVVVLTSRNEKRGLESVQKLKESGLSDFVVFHQLDVA 67

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFV--KDGEPIKWNEIVTPTY 117
           D  +I SLADF++SQFGKLDILVNNA + GV  DGDAL   +  K+G  I W+E +T T+
Sbjct: 68  DINSIASLADFIKSQFGKLDILVNNAGVGGVKTDGDALKAAISGKEGAKINWSEFITQTW 127

Query: 118 ELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLK---NTWQGAI 168
           ELAE+CLR NYYG+KRM E LIPLLQLSD PRIVNVSS+MG LK   N W   +
Sbjct: 128 ELAEECLRINYYGAKRMAEALIPLLQLSDSPRIVNVSSSMGNLKGVSNEWAKGV 181

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541520|ref|XP_002511824.1| carbonyl reductase, putative [Ricinus communis] gi|223549004|gb|EEF50493.1| carbonyl reductase, putative [Ricinus communis]

 Score =  221 bits (564), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 114/165 (69%), Positives = 130/165 (78%), Gaps = 3/165 (1%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVA 59
           YAVVTGANKGIG+    QLASNGI+V+LTARDE+RGLEAV+KLK SG  D V+FHQLDVA
Sbjct: 256 YAVVTGANKGIGFGICEQLASNGIVVILTARDERRGLEAVQKLKDSGLSDYVVFHQLDVA 315

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDAL--SGFVKDGEPIKWNEIVTPTY 117
           + ATI  LADF+++QFGKLDILVNNA I GV  D DAL  S    +G    W E++T TY
Sbjct: 316 NTATIAVLADFIKAQFGKLDILVNNAGIGGVEADDDALRASFSSNEGAQFGWLELLTETY 375

Query: 118 ELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
           ELAE C+  NYYG+KRM E L PLLQLSD PRIVNVSS+MGKLKN
Sbjct: 376 ELAEACITVNYYGAKRMVEALFPLLQLSDSPRIVNVSSSMGKLKN 420

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15233062|ref|NP_191681.1| (+)-neomenthol dehydrogenase [Arabidopsis thaliana] gi|75311801|sp|Q9M2E2.1|SDR1_ARATH RecName: Full=(+)-neomenthol dehydrogenase; AltName: Full=Menthone:neomenthol reductase; AltName: Full=Short-chain dehydrogenase/reductase 1; Short=AtSDR1 gi|6850889|emb|CAB71052.1| putative protein [Arabidopsis thaliana] gi|15028055|gb|AAK76558.1| unknown protein [Arabidopsis thaliana] gi|20259057|gb|AAM14244.1| unknown protein [Arabidopsis thaliana] gi|332646653|gb|AEE80174.1| (+)-neomenthol dehydrogenase [Arabidopsis thaliana]

 Score =  221 bits (563), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 112/166 (67%), Positives = 133/166 (80%), Gaps = 6/166 (3%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLD 57
           YAVVTGAN+GIG+E  RQLAS GI VVLT+RDE RGLEAVE LK        S++FHQLD
Sbjct: 8   YAVVTGANRGIGFEICRQLASEGIRVVLTSRDENRGLEAVETLKKELEISDQSLLFHQLD 67

Query: 58  VADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDAL-SGFVKDGEPIKWNEIVTPT 116
           VADPA+I SLA+FV++QFGKLDILVNNA I G+  D +AL +G  K+G   KW+EI+T T
Sbjct: 68  VADPASITSLAEFVKTQFGKLDILVNNAGIGGIITDAEALRAGAGKEG--FKWDEIITET 125

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
           YEL E+C++ NYYG KRMCE  IPLL+LSD PRIVNVSS+MG+LKN
Sbjct: 126 YELTEECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGQLKN 171

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334186180|ref|NP_001190151.1| (+)-neomenthol dehydrogenase [Arabidopsis thaliana] gi|332646654|gb|AEE80175.1| (+)-neomenthol dehydrogenase [Arabidopsis thaliana]

 Score =  221 bits (562), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 112/166 (67%), Positives = 133/166 (80%), Gaps = 6/166 (3%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLD 57
           YAVVTGAN+GIG+E  RQLAS GI VVLT+RDE RGLEAVE LK        S++FHQLD
Sbjct: 15  YAVVTGANRGIGFEICRQLASEGIRVVLTSRDENRGLEAVETLKKELEISDQSLLFHQLD 74

Query: 58  VADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDAL-SGFVKDGEPIKWNEIVTPT 116
           VADPA+I SLA+FV++QFGKLDILVNNA I G+  D +AL +G  K+G   KW+EI+T T
Sbjct: 75  VADPASITSLAEFVKTQFGKLDILVNNAGIGGIITDAEALRAGAGKEG--FKWDEIITET 132

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
           YEL E+C++ NYYG KRMCE  IPLL+LSD PRIVNVSS+MG+LKN
Sbjct: 133 YELTEECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGQLKN 178

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489616|ref|XP_002267348.2| PREDICTED: (+)-neomenthol dehydrogenase-like [Vitis vinifera] gi|297745217|emb|CBI40297.3| unnamed protein product [Vitis vinifera]

 Score =  219 bits (559), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 112/175 (64%), Positives = 131/175 (74%), Gaps = 7/175 (4%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           YAVVTGANKGIG E  RQLA+NG+ VVLTARDEKRGLEA+E LK SG  +++FHQLDV D
Sbjct: 8   YAVVTGANKGIGLEICRQLAANGVRVVLTARDEKRGLEALESLKGSGLSNLVFHQLDVGD 67

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFG-VSVDGDALSGFVKDGEP---IKWNEIVTPT 116
           PA+I S+ADF+++QFGKLDILVNNA I G V  D DAL   +   E    + W EI+   
Sbjct: 68  PASISSIADFIKAQFGKLDILVNNAGIGGTVVTDPDALRSRIASAEAVGKVNWKEIMIEP 127

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL---KNTWQGAI 168
           +EL E+CL+ NYYG KRM E  IPLLQLSD PRIVNVSS+MGKL   KN W  A+
Sbjct: 128 FELVEECLKINYYGPKRMIEAFIPLLQLSDSPRIVNVSSSMGKLQNIKNEWAKAV 182

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454097|ref|XP_002267820.1| PREDICTED: (+)-neomenthol dehydrogenase [Vitis vinifera] gi|297745218|emb|CBI40298.3| unnamed protein product [Vitis vinifera]

 Score =  218 bits (555), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 112/175 (64%), Positives = 130/175 (74%), Gaps = 7/175 (4%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           YAVVTGANKGIG E  RQLA+NG+ VVLTARDEKRGLEA+E LK SG  +++FHQLDV D
Sbjct: 8   YAVVTGANKGIGLEICRQLAANGVRVVLTARDEKRGLEALESLKGSGLSNLVFHQLDVGD 67

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFG-VSVDGDALSGFVKDGEP---IKWNEIVTPT 116
           PA+I S+ADF+++QFGKLDILVNNA I G V  D DAL       E    + W EI+   
Sbjct: 68  PASISSIADFIKAQFGKLDILVNNAGIGGTVVTDPDALRSRYASAEAVGKVNWKEIMIEP 127

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL---KNTWQGAI 168
           +EL E+CL+ NYYG KRM E  IPLLQLSD PRIVNVSS+MGKL   KN W  A+
Sbjct: 128 FELVEECLKINYYGPKRMIEAFIPLLQLSDSPRIVNVSSSMGKLQNIKNEWAKAV 182

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817432|ref|XP_002876599.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297322437|gb|EFH52858.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  217 bits (553), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 111/166 (66%), Positives = 132/166 (79%), Gaps = 6/166 (3%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLD 57
           YAVVTGAN+GIG+E  RQLAS GI VVLT+RDEKRGLEAVE LK        S++FHQLD
Sbjct: 8   YAVVTGANRGIGFEICRQLASQGIRVVLTSRDEKRGLEAVETLKKELQISDQSLVFHQLD 67

Query: 58  VADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDAL-SGFVKDGEPIKWNEIVTPT 116
           V+DPA+  SLA+FV++ FGKLDILVNNA + G+  D DAL +G  K+G   KW+EI+T T
Sbjct: 68  VSDPASSTSLAEFVKTLFGKLDILVNNAGVGGIITDADALRAGAGKEG--FKWDEIITET 125

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
           YELAE+C++ NYYG KRMCE  IPLL+LSD PRIVNVSS+MG LKN
Sbjct: 126 YELAEECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGLLKN 171

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489600|ref|XP_002267232.2| PREDICTED: (+)-neomenthol dehydrogenase [Vitis vinifera]

 Score =  217 bits (553), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 113/177 (63%), Positives = 135/177 (76%), Gaps = 10/177 (5%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           YAV+TGANKGIG E  RQLA+NG+IVVLTARDEKRG+EA+E LK SG  +V+FHQLDV D
Sbjct: 249 YAVITGANKGIGLEICRQLAANGVIVVLTARDEKRGVEALESLKGSGLSNVVFHQLDVGD 308

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSV---DGDAL---SGFVKDGEPIKWNEIVT 114
           PA+I SLADF+++QFGKLDILVNNA I G  V   DG  L   +   K G+ I W EI+ 
Sbjct: 309 PASIASLADFIKTQFGKLDILVNNAGIIGTLVTDPDGFRLGIPAARAKVGK-INWKEIMI 367

Query: 115 PTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL---KNTWQGAI 168
             +ELAE+C++ NYYG KRM EVLIPLL+LSD PRIVNVSS+MG+L   KN W   +
Sbjct: 368 EPFELAEECMKINYYGPKRMSEVLIPLLRLSDSPRIVNVSSSMGRLQNIKNEWAKGV 424

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745216|emb|CBI40296.3| unnamed protein product [Vitis vinifera]

 Score =  217 bits (553), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 112/177 (63%), Positives = 134/177 (75%), Gaps = 10/177 (5%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           YAV+TGANKGIG E  RQLA+NG+IVVLTARDEKRG+EA+E LK SG  +V+FHQLDV D
Sbjct: 8   YAVITGANKGIGLEICRQLAANGVIVVLTARDEKRGVEALESLKGSGLSNVVFHQLDVGD 67

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSV-DGDAL-----SGFVKDGEPIKWNEIVT 114
           PA+I SLADF+++QFGKLDILVNNA I G  V D D       +   K G+ I W EI+ 
Sbjct: 68  PASIASLADFIKTQFGKLDILVNNAGIIGTLVTDPDGFRLGIPAARAKVGK-INWKEIMI 126

Query: 115 PTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL---KNTWQGAI 168
             +ELAE+C++ NYYG KRM EVLIPLL+LSD PRIVNVSS+MG+L   KN W   +
Sbjct: 127 EPFELAEECMKINYYGPKRMSEVLIPLLRLSDSPRIVNVSSSMGRLQNIKNEWAKGV 183

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144319|ref|XP_002336130.1| predicted protein [Populus trichocarpa] gi|222873486|gb|EEF10617.1| predicted protein [Populus trichocarpa]

 Score =  215 bits (548), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 113/165 (68%), Positives = 131/165 (79%), Gaps = 3/165 (1%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDV 58
           YAVVTGANKGIGYE  RQLASNGI+VVLTARDEKRGLEAV+KLK SG   D VI+HQLDV
Sbjct: 2   YAVVTGANKGIGYEICRQLASNGILVVLTARDEKRGLEAVQKLKDSGISDDLVIYHQLDV 61

Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALS-GFVKDGEPIKWNEIVTPTY 117
            DP +I SLA+FV++ FGKLDILVNNA I GV+++ DA    F + GE   W EI T  Y
Sbjct: 62  VDPDSIVSLAEFVKNNFGKLDILVNNAGIGGVALEADACQRAFEQSGEFQVWAEIGTQNY 121

Query: 118 ELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
           E+AE+C++TNYYG++ M E L PLLQLSD PRIVNVSS +G LKN
Sbjct: 122 EMAEQCVKTNYYGARGMAEALAPLLQLSDSPRIVNVSSLVGLLKN 166

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
TAIR|locus:2198230	295	AT1G01800 [Arabidopsis thalian	0.925	0.545	0.606	1.8e-46
UNIPROTKB|Q6WAU1	314	Q6WAU1 "(-)-isopiperitenone re	0.545	0.302	0.602	5.8e-40
UNIPROTKB|Q3T0T9	286	MGC127133 "Uncharacterized pro	0.482	0.293	0.568	4e-26
RGD|2286	277	Cbr1 "carbonyl reductase 1" [R	0.522	0.328	0.526	9.1e-25
RGD|2321756	277	LOC100360601 "carbonyl reducta	0.482	0.303	0.545	7.9e-24
MGI|MGI:1309992	277	Cbr3 "carbonyl reductase 3" [M	0.488	0.306	0.540	1e-23
RGD|1309728	277	Cbr3 "carbonyl reductase 3" [R	0.488	0.306	0.528	2.6e-23
ZFIN|ZDB-GENE-030902-2	276	cbr1 "carbonyl reductase 1" [D	0.488	0.307	0.471	3.4e-23
UNIPROTKB|F1N8Y3	276	CBR1 "Uncharacterized protein"	0.505	0.318	0.526	5.4e-23
UNIPROTKB|F1P2X1	277	CBR1 "Uncharacterized protein"	0.505	0.317	0.526	5.4e-23

TAIR|locus:2198230 AT1G01800 [Arabidopsis thaliana (taxid:3702)]

 Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
 Identities = 100/165 (60%), Positives = 129/165 (78%)

Query:     2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLK-HSGF-DSVI-FHQLDV 58
             AVVTG+NKGIG+E  RQLA+NGI VVLTARDE +GL AV+KLK  +GF D  I FH LDV
Sbjct:     7 AVVTGSNKGIGFEICRQLANNGITVVLTARDENKGLAAVQKLKTENGFSDQAISFHPLDV 66

Query:    59 ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKD-GEPIKWNEIVTPTY 117
             ++P TI SLA FV+++FGKLDILVNNA + G +V+ D L   + + G P   ++I++ TY
Sbjct:    67 SNPDTIASLAAFVKTRFGKLDILVNNAGVGGANVNVDVLKAQIAEAGAPTDISKIMSDTY 126

Query:   118 ELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
             E+ E+C++TNYYG KRMCE +IPLLQ SD PRIV+++S MGKL+N
Sbjct:   127 EIVEECVKTNYYGVKRMCEAMIPLLQSSDSPRIVSIASTMGKLEN 171

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

UNIPROTKB|Q6WAU1 Q6WAU1 "(-)-isopiperitenone reductase" [Mentha x piperita (taxid:34256)]

 Score = 284 (105.0 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
 Identities = 59/98 (60%), Positives = 76/98 (77%)

Query:     1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL-KHSGFDS--VIFHQLD 57
             YA+VTGANKGIG+E  RQLA  GIIV+LT+R+EKRGLEA +KL K        ++FHQLD
Sbjct:     7 YALVTGANKGIGFEICRQLAEKGIIVILTSRNEKRGLEARQKLLKELNVSENRLVFHQLD 66

Query:    58 VADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGD 95
             V D A++ ++A F++S+FGKLDILVNNA + GV + GD
Sbjct:    67 VTDLASVAAVAVFIKSKFGKLDILVNNAGVSGVEMVGD 104

GO:0031525 "menthol biosynthetic process" evidence=IDA

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052581 "(-)-isopiperitenone reductase activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

UNIPROTKB|Q3T0T9 MGC127133 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 222 (83.2 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
 Identities = 50/88 (56%), Positives = 63/88 (71%)

Query:     2 AVVTGANKGIGYETVRQLASN--GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
             A+VTGANKG+G+  VR L     G  VVLTARDE RG  AV++L+  G  S  FHQLD+ 
Sbjct:     8 ALVTGANKGLGFAIVRDLCRRFPGD-VVLTARDEARGRAAVQQLQAEGL-SPRFHQLDIT 65

Query:    60 DPATIHSLADFVRSQFGKLDILVNNAAI 87
             D  +IH+L DF+R ++G LD+LVNNAAI
Sbjct:    66 DLQSIHALRDFLRKEYGGLDVLVNNAAI 93

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|2286 Cbr1 "carbonyl reductase 1" [Rattus norvegicus (taxid:10116)]

 Score = 213 (80.0 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
 Identities = 49/93 (52%), Positives = 64/93 (68%)

Query:     2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
             A+VTGANKGIG+  VR L    +  VVLTARDE RG EAV++L+  G  S  FHQLD+ +
Sbjct:     8 ALVTGANKGIGFAIVRDLCRKFLGDVVLTARDESRGHEAVKQLQTEGL-SPRFHQLDIDN 66

Query:    61 PATIHSLADFVRSQFGKLDILVNNAAIFGVSVD 93
             P +I +L DF+  ++G L++LVNNA I    VD
Sbjct:    67 PQSIRALRDFLLQEYGGLNVLVNNAGIAFKVVD 99

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001542 "ovulation from ovarian follicle" evidence=IEP

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO;ISS;IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005902 "microvillus" evidence=IDA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=ISO

GO:0017144 "drug metabolic process" evidence=ISO;ISS

GO:0018205 "peptidyl-lysine modification" evidence=NAS

GO:0032496 "response to lipopolysaccharide" evidence=IEP

GO:0033574 "response to testosterone stimulus" evidence=IEP

GO:0034698 "response to gonadotropin stimulus" evidence=IEP

GO:0042373 "vitamin K metabolic process" evidence=ISO;ISS

GO:0042376 "phylloquinone catabolic process" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=ISO

RGD|2321756 LOC100360601 "carbonyl reductase 2-like" [Rattus norvegicus (taxid:10116)]

 Score = 208 (78.3 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
 Identities = 48/88 (54%), Positives = 61/88 (69%)

Query:     2 AVVTGANKGIGYETVRQLASN--GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
             A+VTGANKGIG+   R L     G  VVLTARDE RG  AV++L+  G  S  FHQLD+ 
Sbjct:     8 ALVTGANKGIGFAITRDLCRKFPGD-VVLTARDEARGRAAVQQLQAEGL-SPRFHQLDID 65

Query:    60 DPATIHSLADFVRSQFGKLDILVNNAAI 87
             +P +I +L DF+R ++G LD+LVNNA I
Sbjct:    66 NPQSICALRDFLRKEYGGLDVLVNNAGI 93

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

MGI|MGI:1309992 Cbr3 "carbonyl reductase 3" [Mus musculus (taxid:10090)]

 Score = 212 (79.7 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
 Identities = 47/87 (54%), Positives = 60/87 (68%)

Query:     2 AVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
             A+VTGANKGIG+   R L       VVLTARDE RG  AV++L+  G  S  FHQLD+ D
Sbjct:     8 ALVTGANKGIGFAITRDLCRKFSGDVVLTARDEARGRAAVQQLQAEGL-SPRFHQLDIDD 66

Query:    61 PATIHSLADFVRSQFGKLDILVNNAAI 87
             P +I +L DF+R ++G L++LVNNA I
Sbjct:    67 PQSIRALRDFLRKEYGGLNVLVNNAGI 93

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000253 "3-keto sterol reductase activity" evidence=ISO

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0042376 "phylloquinone catabolic process" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0070402 "NADPH binding" evidence=ISO

RGD|1309728 Cbr3 "carbonyl reductase 3" [Rattus norvegicus (taxid:10116)]

 Score = 206 (77.6 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
 Identities = 46/87 (52%), Positives = 60/87 (68%)

Query:     2 AVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
             A+VTGANKGIG+   R L       VVLTARDE RG  AV++L+  G  S  FHQLD+ +
Sbjct:     8 ALVTGANKGIGFAITRDLCRKFSGDVVLTARDEARGRAAVKQLQAEGL-SPRFHQLDIDN 66

Query:    61 PATIHSLADFVRSQFGKLDILVNNAAI 87
             P +I +L DF+R ++G L++LVNNA I
Sbjct:    67 PQSIRALRDFLRKEYGGLNVLVNNAGI 93

GO:0000253 "3-keto sterol reductase activity" evidence=IDA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO;IDA

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0042376 "phylloquinone catabolic process" evidence=IDA

GO:0070402 "NADPH binding" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO

ZFIN|ZDB-GENE-030902-2 cbr1 "carbonyl reductase 1" [Danio rerio (taxid:7955)]

 Score = 192 (72.6 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
 Identities = 41/87 (47%), Positives = 56/87 (64%)

Query:     2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
             A+VTGANKGIG+  VR L       V L++RD  RG  AV+ LK  G    +FHQLD+ D
Sbjct:     7 ALVTGANKGIGFAIVRALCKEYTGDVYLSSRDVGRGTAAVDSLKKEGLHP-LFHQLDIND 65

Query:    61 PATIHSLADFVRSQFGKLDILVNNAAI 87
             P ++ +  DF + ++G LD+L+NNA I
Sbjct:    66 PNSVRTARDFFQEKYGGLDVLINNAGI 92

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1N8Y3 CBR1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 196 (74.1 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
 Identities = 49/93 (52%), Positives = 60/93 (64%)

Query:     2 AVVTGANKGIGYETVRQLASN--GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
             AVVTG+NKGIG   VR L     G  V LTARD  RG EAV KL+  G    +FHQLD+ 
Sbjct:     7 AVVTGSNKGIGLAIVRDLCKQFKGD-VYLTARDPARGQEAVAKLQEEGLHP-LFHQLDID 64

Query:    60 DPATIHSLADFVRSQFGKLDILVNNAAI-FGVS 91
             D  +I  L DF++ ++G L++LVNNA I F VS
Sbjct:    65 DLQSIKVLRDFLKEKYGGLNVLVNNAGIAFKVS 97

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1P2X1 CBR1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 196 (74.1 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
 Identities = 49/93 (52%), Positives = 60/93 (64%)

Query:     2 AVVTGANKGIGYETVRQLASN--GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
             AVVTG+NKGIG   VR L     G  V LTARD  RG EAV KL+  G    +FHQLD+ 
Sbjct:     8 AVVTGSNKGIGLAIVRDLCKQFKGD-VYLTARDPARGQEAVAKLQEEGLHP-LFHQLDID 65

Query:    60 DPATIHSLADFVRSQFGKLDILVNNAAI-FGVS 91
             D  +I  L DF++ ++G L++LVNNA I F VS
Sbjct:    66 DLQSIKVLRDFLKEKYGGLNVLVNNAGIAFKVS 98

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	174
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	9e-60
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	9e-33
cd05233	234	cd05233, SDR_c, classical (c) SDRs	8e-31
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-26
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	8e-26
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	1e-22
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	5e-22
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-21
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	3e-21
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	5e-21
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	1e-20
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-20
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	4e-20
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-20
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-20
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	1e-19
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-19
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	8e-19
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-18
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-18
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	4e-18
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-18
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-18
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	6e-18
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	7e-18
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-17
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-17
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	6e-17
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	6e-17
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	7e-17
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	9e-17
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	9e-17
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	9e-17
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-16
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	3e-16
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	3e-16
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	6e-16
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	8e-16
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-15
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-15
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-15
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-15
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-15
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-15
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-15
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	6e-15
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	8e-15
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	8e-15
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	8e-15
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	9e-15
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-14
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-14
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-14
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	2e-14
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-14
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-14
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	4e-14
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	4e-14
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	5e-14
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	5e-14
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	7e-14
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	7e-14
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	8e-14
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	8e-14
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	8e-14
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	8e-14
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	1e-13
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	1e-13
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-13
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-13
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-13
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	2e-13
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	3e-13
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-13
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	4e-13
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	4e-13
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	4e-13
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	6e-13
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	7e-13
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	9e-13
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-12
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-12
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-12
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	1e-12
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-12
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-12
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-12
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-12
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-12
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	2e-12
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-12
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	3e-12
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	3e-12
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	3e-12
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	3e-12
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	4e-12
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	4e-12
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	5e-12
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	6e-12
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	7e-12
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	7e-12
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	7e-12
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	7e-12
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-11
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	1e-11
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-11
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-11
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	2e-11
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-11
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	2e-11
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-11
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-11
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	3e-11
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	3e-11
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	3e-11
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	4e-11
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	4e-11
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	5e-11
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	5e-11
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	5e-11
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	6e-11
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	7e-11
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	7e-11
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	8e-11
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	9e-11
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-11
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	9e-11
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-10
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	1e-10
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-10
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-10
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-10
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	2e-10
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-10
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	3e-10
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	4e-10
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	4e-10
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	5e-10
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	5e-10
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	8e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-09
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-09
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	1e-09
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-09
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	1e-09
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-09
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-09
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-09
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-09
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	3e-09
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-09
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	5e-09
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	5e-09
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	5e-09
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	7e-09
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-08
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-08
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-08
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-08
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-08
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-08
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-08
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-08
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	3e-08
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	3e-08
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	3e-08
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	4e-08
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	5e-08
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	5e-08
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	5e-08
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	7e-08
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	7e-08
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	8e-08
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	8e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	9e-08
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-07
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	1e-07
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-07
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	1e-07
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-07
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	2e-07
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	2e-07
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-07
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	2e-07
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	2e-07
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	2e-07
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-07
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	3e-07
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	3e-07
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	3e-07
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	3e-07
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	3e-07
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-07
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	4e-07
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	5e-07
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	7e-07
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	7e-07
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	7e-07
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	1e-06
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	1e-06
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-06
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	2e-06
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-06
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-06
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-06
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	2e-06
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-06
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	4e-06
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	4e-06
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	5e-06
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	6e-06
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	6e-06
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	8e-06
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	8e-06
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	1e-05
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	1e-05
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	2e-05
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-05
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	2e-05
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	2e-05
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	2e-05
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	4e-05
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	5e-05
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	6e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	9e-05
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-04
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-04
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	2e-04
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	2e-04
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	2e-04
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-04
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-04
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	3e-04
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	4e-04
pfam08659	181	pfam08659, KR, KR domain	5e-04
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	6e-04
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	6e-04
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	7e-04
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	7e-04
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	8e-04
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	0.001
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	0.002
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.002
PRK08862	227	PRK08862, PRK08862, short chain dehydrogenase; Pro	0.002
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	0.002
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	0.002
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	0.003
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	0.003
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	0.004

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  185 bits (471), Expect = 9e-60
 Identities = 77/163 (47%), Positives = 100/163 (61%), Gaps = 20/163 (12%)

Query: 1   YAVVTGANKGIGYETVRQLASNGII-VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            A+VTGAN+GIG+E VRQLA +G   V+LTARD +RG  AVEKL+  G   V FHQLDV 
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLS-VRFHQLDVT 60

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           D A+I + ADFV  ++G LDILVNNA I     D                    TPT E 
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDS------------------TPTREQ 102

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
           A + ++TN++G+  + + L+PLL+ S   RIVNVSS +G L +
Sbjct: 103 ARETMKTNFFGTVDVTQALLPLLKKSPAGRIVNVSSGLGSLTS 145

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  117 bits (295), Expect = 9e-33
 Identities = 55/167 (32%), Positives = 82/167 (49%), Gaps = 30/167 (17%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL-KHSGFDSVIFHQLDVA 59
             V+TGAN GIG ET R+LA  G  V++  R+E++G EA  ++ K +G   V   QLD++
Sbjct: 3   VVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLDLS 62

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAI----FGVSVDGDALSGFVKDGEPIKWNEIVTP 115
             A++   A+   ++F +LDIL+NNA I      ++ DG     F               
Sbjct: 63  SLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDG-----F--------------- 102

Query: 116 TYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
                E     NY G   +  +L+P+L+ S   RIVNVSS   +   
Sbjct: 103 -----ELQFAVNYLGHFLLTNLLLPVLKASAPSRIVNVSSIAHRAGP 144

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  111 bits (279), Expect = 8e-31
 Identities = 50/166 (30%), Positives = 71/166 (42%), Gaps = 21/166 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA+ GIG    R+LA  G  VVL  R+E+   E        G  + +  Q DV+D 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGG--NAVAVQADVSDE 58

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +L +    +FG+LDILVNNA I                        +   T E  +
Sbjct: 59  EDVEALVEEALEEFGRLDILVNNAGIARPG-------------------PLEELTDEDWD 99

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           + L  N  G   +    +P ++     RIVN+SS  G      Q A
Sbjct: 100 RVLDVNLTGVFLLTRAALPHMKKQGGGRIVNISSVAGLRPLPGQAA 145

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  100 bits (252), Expect = 1e-26
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 23/168 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TG + GIG      LA+ G  V+ TAR+    LE++ +L +   + +   +LDV D 
Sbjct: 3   VLITGCSSGIGLALALALAAQGYRVIATARN-PDKLESLGELLNDNLEVL---ELDVTDE 58

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            +I +    V  +FG++D+LVNNA           L G +++          T   E   
Sbjct: 59  ESIKAAVKEVIERFGRIDVLVNNAGY--------GLFGPLEE----------TSI-EEVR 99

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
           +    N +G  R+    +PL++     RIVNVSS  G +   + G  C
Sbjct: 100 ELFEVNVFGPLRVTRAFLPLMRKQGSGRIVNVSSVAGLVPTPFLGPYC 147

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 98.7 bits (246), Expect = 8e-26
 Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 24/169 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVA 59
           A+VTGA+ GIG    R LA  G  +VV   R E+   EA+   +K +G         DV+
Sbjct: 8   ALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVS 67

Query: 60  D-PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
           D   ++ +L      +FG++DILVNNA I G     + L                  T E
Sbjct: 68  DDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEEL------------------TEE 109

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
             ++ +  N  G+  +    +PL++     RIVN+SS  G      Q A
Sbjct: 110 DWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGLGGPPGQAA 155

Length = 251

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 88.4 bits (220), Expect = 1e-22
 Identities = 46/169 (27%), Positives = 66/169 (39%), Gaps = 27/169 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGL--EAVEKLKHSGFDSVIFHQLDV 58
            ++TG   G+G    R LA+ G   +VL +R        E V +L+  G   V     DV
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGA-EVTVAACDV 61

Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
           AD   + +L   + +  G LD +V+NA   GV  DG                 +   T E
Sbjct: 62  ADRDALAALLAALPAALGPLDGVVHNA---GVLDDGP----------------LEELTPE 102

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
             E+ L     G+  + E+   L    DL   V  SS  G L +  Q  
Sbjct: 103 RFERVLAPKVTGAWNLHELTRDL----DLGAFVLFSSVAGVLGSPGQAN 147

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 88.5 bits (220), Expect = 5e-22
 Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 20/155 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA +G+G      LA  G  V           E    L+ +G         D+ADP
Sbjct: 10  ALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGR-AHAIAADLADP 68

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A++    D   +  G LD LVNNA I          S    + +   W+ ++        
Sbjct: 69  ASVQRFFDAAAAALGGLDGLVNNAGI--------TNSKSATELDIDTWDAVM-------- 112

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN 156
                N  G+  M    +P L+ S   RIVN++S+
Sbjct: 113 ---NVNVRGTFLMLRAALPHLRDSGRGRIVNLASD 144

Length = 250

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 87.3 bits (217), Expect = 2e-21
 Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 23/161 (14%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
            A++TGA+ GIG E  +QLA  G  ++L AR E +     ++L+      V     D++D
Sbjct: 8   TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSD 67

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIK--WNEIVTPTYE 118
           P  +  L D ++ + G +D+LVNNA             GF   G  ++   +E       
Sbjct: 68  PEALERLEDELKERGGPIDVLVNNA-------------GFGTFGPFLELSLDEE------ 108

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
             E+ ++ N     R+ + ++P +       I+N+ S  G 
Sbjct: 109 --EEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL 147

Length = 265

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 86.2 bits (214), Expect = 3e-21
 Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 25/160 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
            ++TGA++GIG E VRQL + G   V+ T RD       +  L  +    +   +LDV D
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRD-PSAATELAALG-ASHSRLHILELDVTD 58

Query: 61  PATIHSLADFVRS--QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
              I   A+ V        LD+L+NNA I                     +        E
Sbjct: 59  E--IAESAEAVAERLGDAGLDVLINNAGILH------------------SYGPASEVDSE 98

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
              +  + N  G   + +  +PLL      +I+N+SS +G
Sbjct: 99  DLLEVFQVNVLGPLLLTQAFLPLLLKGARAKIINISSRVG 138

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 85.7 bits (213), Expect = 5e-21
 Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 20/161 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG     +LA+ G  V +T R E+   E VE++K  G ++    + DV+D 
Sbjct: 3   ALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAAL-EADVSDR 61

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +L + V ++FG +DILVNNA I       D L   + + +   W+ +         
Sbjct: 62  EAVEALVEKVEAEFGPVDILVNNAGI-----TRDNLLMRMSEED---WDAV--------- 104

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
             +  N  G   + + +I  +      RI+N+SS +G + N
Sbjct: 105 --INVNLTGVFNVTQAVIRAMIKRRSGRIINISSVVGLIGN 143

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 85.0 bits (211), Expect = 1e-20
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 24/155 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
           A++TGA+ GIG  T R LA  G  VVL AR E+R LEA+ +++   G  + +   LDV D
Sbjct: 9   ALITGASSGIGEATARALAEAGAKVVLAARREER-LEALADEI---GAGAALALALDVTD 64

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
            A + +  + +  +FG++DILVNNA        G AL   + + +   W+ ++       
Sbjct: 65  RAAVEAAIEALPEEFGRIDILVNNA--------GLALGDPLDEADLDDWDRMID------ 110

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                TN  G       ++P +       I+N+ S
Sbjct: 111 -----TNVKGLLNGTRAVLPGMVERKSGHIINLGS 140

Length = 246

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 84.1 bits (209), Expect = 2e-20
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA+ GIG    R+ A+ G  VV+T R+E+       ++   G    I    DV+D 
Sbjct: 8  AIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG--RAIAVAADVSDE 65

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIF 88
          A + +       +FG +DILVNNA   
Sbjct: 66 ADVEAAVAAALERFGSVDILVNNAGTT 92

Length = 251

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 83.8 bits (208), Expect = 4e-20
 Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 19/158 (12%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           ++TGA+ GIG E    LA  G  +VL+AR E+R  E   +    G  S     LD++D  
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPLDMSDLE 66

Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEK 122
               + +     FG LDIL+NNA   G+S+          D            + ++  K
Sbjct: 67  DAEQVVEEALKLFGGLDILINNA---GISM-----RSLFHD-----------TSIDVDRK 107

Query: 123 CLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
            +  NY+G   + +  +P L       IV VSS  GK+
Sbjct: 108 IMEVNYFGPVALTKAALPHLIERSQGSIVVVSSIAGKI 145

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 83.3 bits (207), Expect = 5e-20
 Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 21/155 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA-VEKLKHSGFDSVIFHQLDVAD 60
           A+VTGA++GIG     +LA+ G  VV+     + G EA V ++   G    +  Q DV+D
Sbjct: 8   ALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGK-ALAVQGDVSD 66

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             ++    D  +++FG +DILVNNA I                    + N ++    E  
Sbjct: 67  AESVERAVDEAKAEFGGVDILVNNAGI-------------------TRDNLLMRMKEEDW 107

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           ++ + TN  G   + + +   +      RI+N+SS
Sbjct: 108 DRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS 142

Length = 248

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 82.9 bits (206), Expect = 7e-20
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 20/154 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG     +LA++G  VV+   +E+       +L+ +G         DV+D 
Sbjct: 8   ALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG-GEARVLVFDVSDE 66

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A + +L +     FG LDILVNNA I       DAL   +       W+ ++       +
Sbjct: 67  AAVRALIEAAVEAFGALDILVNNAGIT-----RDAL---LPRMSEEDWDRVI-------D 111

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
             L   +   +      +P +  +   RIVN+SS
Sbjct: 112 VNLTGTFNVVRA----ALPPMIKARYGRIVNISS 141

Length = 246

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 83.5 bits (207), Expect = 1e-19
 Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 34/172 (19%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS-VIFHQLDVAD 60
           AVVTGAN G+GYET   LA+ G  VVL  R+  +G  A  ++  +   + V   +LD+  
Sbjct: 19  AVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS 78

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIF----GVSVDGDALSGFVKDGEPIKWNEIVTPT 116
            A++ + AD +R+ + ++D+L+NNA +       + DG                      
Sbjct: 79  LASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADG---------------------- 116

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAI 168
           +EL      TN+ G   +  +L+  L      R+V VSS   +     + AI
Sbjct: 117 FELQ---FGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHR----IRAAI 161

Length = 306

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 81.3 bits (201), Expect = 3e-19
 Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 23/154 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG  +G+G    R L + G  VVL+   ++ G  A  +L     D+  F  LDV D 
Sbjct: 8   AIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELG----DAARFFHLDVTDE 63

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
               ++ D  R  FG+LD+LVNNA I           G V+     +W  +         
Sbjct: 64  DGWTAVVDTAREAFGRLDVLVNNAGI--------LTGGTVETTTLEEWRRL--------- 106

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
             L  N  G       +IP ++ +    I+N+SS
Sbjct: 107 --LDINLTGVFLGTRAVIPPMKEAGGGSIINMSS 138

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 80.0 bits (198), Expect = 8e-19
 Identities = 45/158 (28%), Positives = 64/158 (40%), Gaps = 20/158 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VT A+ GIG    R LA  G  V + AR+ +  LE       +G   V+    D+ DP
Sbjct: 4   ALVTAASSGIGLAIARALAREGARVAICARNREN-LERAASELRAGGAGVLAVVADLTDP 62

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I  L +     FG++DILVNNA             G    G   +       T E   
Sbjct: 63  EDIDRLVEKAGDAFGRVDILVNNA-------------GGPPPGPFAEL------TDEDWL 103

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
           +          R+   ++P ++     RIVN+SS   K
Sbjct: 104 EAFDLKLLSVIRIVRAVLPGMKERGWGRIVNISSLTVK 141

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 80.0 bits (198), Expect = 1e-18
 Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 20/154 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA +GIG     +LA++G  V++            E ++ +G       Q+DV D 
Sbjct: 9   ALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG-GKARARQVDVRDR 67

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A + +        FG+LDILV NA IF              + +  +W  +         
Sbjct: 68  AALKAAVAAGVEDFGRLDILVANAGIFP--------LTPFAEMDDEQWERV--------- 110

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
             +  N  G+  + +  +P L  +   RIV  SS
Sbjct: 111 --IDVNLTGTFLLTQAALPALIRAGGGRIVLTSS 142

Length = 251

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 79.2 bits (196), Expect = 2e-18
 Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 1/86 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA  GIG E    LA  G  VV+   +++    A E L+ +G    I   +DV D 
Sbjct: 7  ALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGK-AIGVAMDVTDE 65

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            I++  D+    FG +DILVNNA I
Sbjct: 66 EAINAGIDYAVETFGGVDILVNNAGI 91

Length = 258

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 77.7 bits (192), Expect = 4e-18
 Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 22/157 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TG   GIG    R+    G  V++T R E+R  EA ++L      ++    LDV D 
Sbjct: 8   VLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELP-----NIHTIVLDVGDA 62

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            ++ +LA+ + S++  LDIL+NNA   G+    D     ++D              + A+
Sbjct: 63  ESVEALAEALLSEYPNLDILINNA---GIQRPID-----LRDPA---------SDLDKAD 105

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
             + TN  G  R+ +  +P L+      IVNVSS + 
Sbjct: 106 TEIDTNLIGPIRLIKAFLPHLKKQPEATIVNVSSGLA 142

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 78.0 bits (193), Expect = 4e-18
 Identities = 50/172 (29%), Positives = 74/172 (43%), Gaps = 30/172 (17%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            A+VTGA+ GIG      LA  G  VV+    +E+   E +E++K  G D  I  + DV+
Sbjct: 7   VAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGD-AIAVKADVS 65

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
               + +L + +  +FGK+DILVNNA I           G V D    +W+ ++      
Sbjct: 66  SEEDVENLVEQIVEKFGKIDILVNNAGISNF--------GLVTDMTDEEWDRVI------ 111

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTW--QGAIC 169
                  N  G   +    +P +       IVN+SS        W   GA C
Sbjct: 112 -----DVNLTGVMLLTRYALPYMIKRKSGVIVNISS-------IWGLIGASC 151

Length = 247

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 78.0 bits (193), Expect = 5e-18
 Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 2/88 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
          A+VTGA +G+G     +LA  G  VV+  R DE+   E VE ++  G       Q DV D
Sbjct: 9  ALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALG-RRAQAVQADVTD 67

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAIF 88
           A + +       +FG++DILVNNA IF
Sbjct: 68 KAALEAAVAAAVERFGRIDILVNNAGIF 95

Length = 249

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 78.1 bits (193), Expect = 6e-18
 Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 29/163 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTG  +GIG    R LA+ G  + +    D++      ++L+  G + VIF   DVAD
Sbjct: 5   ALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE-VIFFPADVAD 63

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
            +   ++ D  ++ +G++D LVNNA + GV V GD L               +TP  E  
Sbjct: 64  LSAHEAMLDAAQAAWGRIDCLVNNAGV-GVKVRGDLLD--------------LTP--ESF 106

Query: 121 EKCLRTNYYG--------SKRMCEVLIPLLQLSDLPRIVNVSS 155
           ++ L  N  G        +KRM     P  +      IV VSS
Sbjct: 107 DRVLAINLRGPFFLTQAVAKRML--AQPEPEELPHRSIVFVSS 147

Length = 256

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 77.9 bits (192), Expect = 7e-18
 Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 28/178 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG  T +  A  G  VV+  RD +   E V     +G  +    Q DV   
Sbjct: 8   AIVTGAGSGIGRATAKLFAREGARVVVADRDAE-AAERVAAAIAAGGRAFA-RQGDVGSA 65

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +L DFV +++G+LD+LVNNA   G    G      V   +   W+ +         
Sbjct: 66  EAVEALVDFVAARWGRLDVLVNNA---GFGCGGT-----VVTTDEADWDAV--------- 108

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM----GKLKNTW---QGAICYLT 172
             +R N  G     +  IP++Q      IVN +S +    G+ +  +   +GAI  LT
Sbjct: 109 --MRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLT 164

Length = 252

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 77.4 bits (191), Expect = 1e-17
 Identities = 48/160 (30%), Positives = 68/160 (42%), Gaps = 30/160 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQ-LDVAD 60
           AVVTG + GIG  TV  L   G  V +  RDE+R   A  +L+     + +     DV D
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLD 70

Query: 61  PATIHSLADFVRSQFGKLDILVNNA-----AIFGVSVDGDALSGFVKDGEPIKWNEIVTP 115
            A + + A  V ++FG +D+LVNNA     + F  + D               W +    
Sbjct: 71  EADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDA-------------WRD---- 113

Query: 116 TYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
             EL  K     Y+         +PLL+ S    IV V+S
Sbjct: 114 --ELELK-----YFSVINPTRAFLPLLRASAAASIVCVNS 146

Length = 265

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 76.2 bits (188), Expect = 2e-17
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 22/158 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TG +KGIG+     L + G  V +TARD+K   EA  +L + G  +V+    DV D 
Sbjct: 9   ALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG--NVLGLAADVRDE 66

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A +    D + + FG LD+L+ NA        G      V++  P +W  +         
Sbjct: 67  ADVQRAVDAIVAAFGGLDVLIANA--------GVGHFAPVEELTPEEWRLV--------- 109

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
             + TN  G+    +  +P L+      I+N+SS  G 
Sbjct: 110 --IDTNLTGAFYTIKAAVPALKRGG-GYIINISSLAGT 144

Length = 237

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 75.2 bits (185), Expect = 6e-17
 Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 21/158 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG  KGIGY  V +LA  G  V   AR++K   E + + +  GF  V     DV+  
Sbjct: 9   ALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGF-KVEGSVCDVSSR 67

Query: 62  ATIHSLADFVRSQF-GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           +    L D V S F GKL+ILVNNA   G ++  +A     KD     ++ I++      
Sbjct: 68  SERQELMDTVASHFGGKLNILVNNA---GTNIRKEA-----KDYTEEDYSLIMS------ 113

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
                TN+  +  +  +  PLL+ S    IV +SS  G
Sbjct: 114 -----TNFEAAYHLSRLAHPLLKASGNGNIVFISSVAG 146

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 75.4 bits (186), Expect = 6e-17
 Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 26/159 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA+ GIG  T R+LA+ G  V   AR     ++ +E L   G   V    LDV D 
Sbjct: 6   ALVTGASSGIGKATARRLAAQGYTVYGAARR----VDKMEDLASLG---VHPLSLDVTDE 58

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A+I +  D + ++ G++D+LVNNA        G    G ++D  PI          + A 
Sbjct: 59  ASIKAAVDTIIAEEGRIDVLVNNA--------GYGSYGAIED-VPI----------DEAR 99

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
           +    N +G+ R+ ++++P ++     RI+N+SS  GK+
Sbjct: 100 RQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI 138

Length = 273

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 74.7 bits (184), Expect = 7e-17
 Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 21/155 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTG ++GIG     +LA  G  VV+   + +    E   +++  G  +V+  + DV+ 
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVV-RADVSQ 59

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           P  +  +   V+ +FG+LD+LV+NAA           +G  +    +             
Sbjct: 60  PQDVEEMFAAVKERFGRLDVLVSNAA-----------AGAFRPLSELTPAHW-------- 100

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           +  + TN        +    L++     RIV +SS
Sbjct: 101 DAKMNTNLKALVHCAQQAAKLMRERGGGRIVAISS 135

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 74.3 bits (183), Expect = 9e-17
 Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 20/167 (11%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           V+TGA+ GIG  T    A  G  VVL AR  +   E   +++  G +++     DVAD A
Sbjct: 4   VITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAV-VADVADAA 62

Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEK 122
            +   AD    +FG++D  VNNA   GV+V G                E VTP  E   +
Sbjct: 63  QVERAADTAVERFGRIDTWVNNA---GVAVFGRF--------------EDVTP--EEFRR 103

Query: 123 CLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
               NY G        +P L+      ++NV S +G      Q A  
Sbjct: 104 VFDVNYLGHVYGTLAALPHLRRRGGGALINVGSLLGYRSAPLQAAYS 150

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 74.8 bits (184), Expect = 9e-17
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA  GIG      LA  G  VV+   + +      +++   G  + I  Q+DV+DP
Sbjct: 9  AIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGG-TAIAVQVDVSDP 67

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFG 89
           +  ++AD   S FG +D LVNNAAI+G
Sbjct: 68 DSAKAMADATVSAFGGIDYLVNNAAIYG 95

Length = 250

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 74.6 bits (184), Expect = 9e-17
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 21/165 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGA++GIG     +LA  G  V++T    E+   E VE+LK  G  ++     DV+D
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGV-VCDVSD 59

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              + ++ + +  + G +DILVNNA I       D L   +K+ +   W           
Sbjct: 60  REDVKAVVEEIEEELGPIDILVNNAGI-----TRDNLLMRMKEED---W----------- 100

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
           +  + TN  G   + + ++ ++      RI+N+SS +G + N  Q
Sbjct: 101 DAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQ 145

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 74.7 bits (184), Expect = 1e-16
 Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 25/161 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRG--LEAVEKLKHSGFDSVIFHQLDV 58
           A+VTGA+ G G  T  +LA  G +V+ T R+ EK+   L    +L      ++   QLDV
Sbjct: 6   AIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQ--QNIKVQQLDV 63

Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
            D  +IH+    ++ + G++D+LVNNA        G A  GFV++           P  E
Sbjct: 64  TDQNSIHNFQLVLK-EIGRIDLLVNNA--------GYANGGFVEE----------IPVEE 104

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
              K   TN +G+  + + ++P ++     +I+N+SS  G+
Sbjct: 105 Y-RKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGR 144

Length = 280

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 72.8 bits (179), Expect = 3e-16
 Identities = 49/159 (30%), Positives = 70/159 (44%), Gaps = 24/159 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG E  R LA +G  V L  R+     E +  L  SG D V     D  DP
Sbjct: 3   ALVTGASRGIGIEIARALARDGYRVSLGLRNP----EDLAALSASGGD-VEAVPYDARDP 57

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
               +L D +R +FG++D+LV+NA I                G P    E    +    E
Sbjct: 58  EDARALVDALRDRFGRIDVLVHNAGI----------------GRPTTLREG---SDAELE 98

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
                N      +   L+P L+ +   R+V ++S  GK 
Sbjct: 99  AHFSINVIAPAELTRALLPALREAGSGRVVFLNSLSGKR 137

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 73.3 bits (180), Expect = 3e-16
 Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 22/170 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV--EKLKHSGFDSVIFHQLDVA 59
           A+VTG+  GIG    R LA+ G  +VL    +   +EAV        G   V++H  D++
Sbjct: 5   ALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVK-VLYHGADLS 63

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
            PA I  +  + + QFG +DILVNNA I  V+         ++D    KW+ I+      
Sbjct: 64  KPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAP--------IEDFPTEKWDAIIALN--- 112

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
               L   ++ ++    + +P ++     RI+N++S  G + +  + A  
Sbjct: 113 ----LSAVFHTTR----LALPHMKKQGWGRIINIASVHGLVASANKSAYV 154

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 73.4 bits (181), Expect = 6e-16
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 5/91 (5%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE-AVEKLKHSGFDSVIFHQLDVAD 60
           V+TGA+ G+G  T R  A  G  VVL AR E  GLE    +++ +G +++     DVAD
Sbjct: 11 VVITGASAGVGRATARAFARRGAKVVLLARGE-EGLEALAAEIRAAGGEALAV-VADVAD 68

Query: 61 PATIHSLADFVRSQFGKLDILVNNAA--IFG 89
             + + AD    + G +D  VNNA   +FG
Sbjct: 69 AEAVQAAADRAEEELGPIDTWVNNAMVTVFG 99

Length = 334

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 72.3 bits (178), Expect = 8e-16
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 20/158 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TGA++GIG     +LA  G  +VL AR+E R     ++L   G    +    DV+D 
Sbjct: 4   VIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHG-GEALVVPTDVSDA 62

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                L +   ++FG +DILVNNA   G++      S F +                + E
Sbjct: 63  EACERLIEAAVARFGGIDILVNNA---GIT----MWSRFDE-----------LTDLSVFE 104

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
           + +R NY G+       +P L+ S   +IV VSS  G 
Sbjct: 105 RVMRVNYLGAVYCTHAALPHLKASR-GQIVVVSSLAGL 141

Length = 263

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 71.7 bits (176), Expect = 1e-15
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 28/162 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQL----- 56
           A++TGA+KGIG    R+    G  V++ ARD     +A+ + +    +     ++     
Sbjct: 12  ALITGASKGIGLAIAREFLGLGADVLIVARDA----DALAQARDELAEEFPEREVHGLAA 67

Query: 57  DVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPT 116
           DV+D     ++ D+V   +  L ILVNNA   G ++   A+     D    +W  I    
Sbjct: 68  DVSDDEDRRAILDWVEDHWDGLHILVNNA---GGNIRKAAI-----DYTEDEWRGI---- 115

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
                    TN + +  +     PLL+      IVN+ S  G
Sbjct: 116 -------FETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSG 150

Length = 257

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 71.2 bits (175), Expect = 1e-15
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDVAD 60
          A++TG   GIG  T + L   G  V +  R+E  G  A  +L+         F Q DV  
Sbjct: 3  AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAA--ELQAINPKVKATFVQCDVTS 60

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAIF 88
             + +       +FG++DIL+NNA I 
Sbjct: 61 WEQLAAAFKKAIEKFGRVDILINNAGIL 88

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha, 15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 71.1 bits (175), Expect = 1e-15
 Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 22/157 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS---VIFHQLDV 58
            ++TG + GIG    ++L   G  V++ AR E +  EAVE+++     S   V +   D+
Sbjct: 4   VLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISADL 63

Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
           +D   +         + G  D++VN A   G+S+ G                     T E
Sbjct: 64  SDYEEVEQAFAQAVEKGGPPDLVVNCA---GISIPGL----------------FEDLTAE 104

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
             E+ +  NY+GS  +   ++PL++      IV VSS
Sbjct: 105 EFERGMDVNYFGSLNVAHAVLPLMKEQRPGHIVFVSS 141

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 71.0 bits (174), Expect = 2e-15
 Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 20/158 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA+ GIG  T R LA+ G  V + AR   R LEA+     +     +  +LDV D 
Sbjct: 6   ALVTGASSGIGEATARALAAEGAAVAIAARRVDR-LEALADELEAEGGKALVLELDVTDE 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +  +      G+LDILVNNA I         L G V+D +   W  ++        
Sbjct: 65  QQVDAAVERTVEALGRLDILVNNAGIM--------LLGPVEDADTTDWTRMID------- 109

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
               TN  G        +P   L +   IVN+SS  G+
Sbjct: 110 ----TNLLGLMYTTHAALPHHLLRNKGTIVNISSVAGR 143

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 71.1 bits (175), Expect = 2e-15
 Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 28/157 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA+ GIG  T  +LA  G  V  T+R+  R          +    V   +LDV D 
Sbjct: 7   ALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA---------APIPGVELLELDVTDD 57

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A++ +  D V ++ G++D+LVNNA   GV + G A              E  +   + A+
Sbjct: 58  ASVQAAVDEVIARAGRIDVLVNNA---GVGLAGAA-------------EE--SSIAQ-AQ 98

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
               TN +G  RM   ++P ++     RI+N+SS +G
Sbjct: 99  ALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLG 135

Length = 270

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 70.2 bits (172), Expect = 3e-15
 Identities = 52/173 (30%), Positives = 70/173 (40%), Gaps = 33/173 (19%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG  T R L + G  V + ARDE R   A  +              DV D 
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGLAG----DVRDE 58

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A +    D +   FG LD LVNNA        G  +   V++  P +W  ++      A 
Sbjct: 59  ADVRRAVDAMEEAFGGLDALVNNA--------GVGVMKPVEELTPEEWRLVLDTNLTGAF 110

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPR----IVNVSSNMGKLKNTWQGAICY 170
            C+           +    L     L R    IVNV S  G  KN ++G   Y
Sbjct: 111 YCIH----------KAAPAL-----LRRGGGTIVNVGSLAG--KNAFKGGAAY 146

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 70.5 bits (173), Expect = 3e-15
 Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 22/159 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
           A++TGA +GIG      LA  G+ V L AR E+  L+AV E+++  G   V+    DV+D
Sbjct: 10  ALITGAGRGIGRAVAIALAKEGVNVGLLARTEE-NLKAVAEEVEAYGV-KVVIATADVSD 67

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              + +  + ++++ G +DIL+NNA I        +  G   + +P +W           
Sbjct: 68  YEEVTAAIEQLKNELGSIDILINNAGI--------SKFGKFLELDPAEW----------- 108

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
           EK ++ N  G       ++P +       I+N+SS  G+
Sbjct: 109 EKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQ 147

Length = 239

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 70.0 bits (172), Expect = 6e-15
 Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           +TG  +GIG  T R LA+ G  V +   DE    E   +L       V+   LDV DPA
Sbjct: 9  AITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL-----GLVVGGPLDVTDPA 63

Query: 63 TIHSLADFVRSQFGKLDILVNNAAI 87
          +  +  D V +  G +D+LVNNA +
Sbjct: 64 SFAAFLDAVEADLGPIDVLVNNAGV 88

Length = 273

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 69.7 bits (171), Expect = 8e-15
 Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 20/154 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG    R LA+ G  VV+    E+    A +    +G  SVI+   DV   
Sbjct: 4   ALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGG-SVIYLPADVTKE 62

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I  +     ++FG LDILVNNA I  V+         +++  P  W+ I+        
Sbjct: 63  DEIADMIAAAAAEFGGLDILVNNAGIQHVAP--------IEEFPPEDWDRIIA------- 107

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                    +       +P ++     RI+N++S
Sbjct: 108 ----VMLTSAFHTIRAALPHMKKQGWGRIINIAS 137

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 69.5 bits (170), Expect = 8e-15
 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 22/154 (14%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA-VEKLKHSGFDSVIFHQLDVADP 61
           ++TGAN GIG      +A  G  V +  R++ R  EA  E    SG  ++  H +D++DP
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDP 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +    +  + +  KL +L+NNA   G  V+   L+    DG                E
Sbjct: 65  KQVWEFVEEFKEEGKKLHVLINNA---GCMVNKRELTE---DG---------------LE 103

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           K   TN  G+  +   LIP+L+  + PR++ VSS
Sbjct: 104 KNFATNTLGTYILTTHLIPVLEKEEDPRVITVSS 137

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 69.6 bits (171), Expect = 8e-15
 Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTG ++G+G +    L   G  VVL+AR  +   EA   L+  G D++     DVAD 
Sbjct: 15 ALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWI-AADVADE 73

Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
          A I  LA+    +FG +DILVNNA
Sbjct: 74 ADIERLAEETLERFGHVDILVNNA 97

Length = 259

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 69.1 bits (170), Expect = 9e-15
 Identities = 48/155 (30%), Positives = 65/155 (41%), Gaps = 31/155 (20%)

Query: 2   AVVTGANKGIGYETVRQLASNGII-VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
            +VTGAN+GIG   V QL + G   V   ARD        E +   G   V+  QLDV D
Sbjct: 9   VLVTGANRGIGRAFVEQLLARGAAKVYAAARD-------PESVTDLG-PRVVPLQLDVTD 60

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           PA++ + A+        + ILVNNA IF            + +G             +  
Sbjct: 61  PASVAAAAE----AASDVTILVNNAGIF-------RTGSLLLEG-----------DEDAL 98

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
              + TNY+G   M     P+L  +    IVNV S
Sbjct: 99  RAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLS 133

Length = 238

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 69.0 bits (169), Expect = 1e-14
 Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 3/101 (2%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGA++GIG    R+LA++G  V +  A       E V +++ +G  ++   Q DVAD
Sbjct: 8   AIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAV-QADVAD 66

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGV-SVDGDALSGF 100
            A +  L D   + FG++D+LVNNA +  + ++    L  F
Sbjct: 67  AAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDF 107

Length = 245

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 68.9 bits (169), Expect = 1e-14
 Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA+ GIG     +LA+ G  VV+  R ++   E V +   +     I  Q DV+  
Sbjct: 6   ALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADVSKE 65

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIV 113
             + +L      +FG LDILVNNA +      GDA S    +     WN+++
Sbjct: 66  EDVVALFQSAIKEFGTLDILVNNAGL-----QGDASSH---EMTLEDWNKVI 109

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 68.8 bits (169), Expect = 1e-14
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TGA+ GIG    +  A  G  VV+ AR +    + V +++  G +  +    DV D 
Sbjct: 9  AIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGE-AVALAGDVRDE 67

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFG 89
          A   +L      +FG LDI  NNA   G
Sbjct: 68 AYAKALVALAVERFGGLDIAFNNAGTLG 95

Length = 254

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 70.0 bits (172), Expect = 2e-14
 Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 45/167 (26%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            VVTGA  GIG ET    A  G  VV +  DE       E ++ +G  +   +++DV+D 
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHA-YRVDVSDA 376

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + + A++VR++ G  DI+VNNA I         ++G   D     W           +
Sbjct: 377 DAMEAFAEWVRAEHGVPDIVVNNAGI--------GMAGGFLDTSAEDW-----------D 417

Query: 122 KCLRTNYYG--------SKRMCEVLIPLLQLSDLPR-----IVNVSS 155
           + L  N +G         ++M E            R     IVNV+S
Sbjct: 418 RVLDVNLWGVIHGCRLFGRQMVE------------RGTGGHIVNVAS 452

Length = 582

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 68.2 bits (167), Expect = 2e-14
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
          A+VTG+++GIG     +LA  G  I V  AR  K   E  E+++  G  ++   + +V D
Sbjct: 7  ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAV-KANVGD 65

Query: 61 PATIHSLADFVRSQFGKLDILVNNAA 86
             I  +   +  +FG+LD+ VNNAA
Sbjct: 66 VEKIKEMFAQIDEEFGRLDVFVNNAA 91

Length = 250

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 67.7 bits (166), Expect = 3e-14
 Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 20/159 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TG   GIG     + A  G  VV+   +EK   E    ++ +G   V +++ DV+  
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAG-GKVHYYKCDVSKR 60

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             ++  A  ++ + G + IL+NNA +    V G  L                    E  E
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGV----VSGKKLLEL---------------PDEEIE 101

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
           K    N        +  +P +   +   IV ++S  G +
Sbjct: 102 KTFEVNTLAHFWTTKAFLPDMLERNHGHIVTIASVAGLI 140

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 67.3 bits (165), Expect = 4e-14
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 6/89 (6%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVL---TARDEKRGLEAVEKLKHSGFDSVIFHQLDV 58
          A+VTGA++GIG    ++LA +G  VV+   +++      E V +++ +G    I  Q DV
Sbjct: 6  ALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAE--EVVAEIEAAG-GKAIAVQADV 62

Query: 59 ADPATIHSLADFVRSQFGKLDILVNNAAI 87
          +DP+ +  L D     FG +DILVNNA +
Sbjct: 63 SDPSQVARLFDAAEKAFGGVDILVNNAGV 91

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 68.8 bits (169), Expect = 4e-14
 Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 34/161 (21%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           ++TGA+ GIG  T  ++A  G  V L AR+ +   E V +++  G      +  D+ D A
Sbjct: 375 LITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGT-AHAYTCDLTDSA 433

Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPT-----Y 117
            +      + ++ G +D LVNNA                  G  I+   +   T     Y
Sbjct: 434 AVDHTVKDILAEHGHVDYLVNNA------------------GRSIR-RSVENSTDRFHDY 474

Query: 118 ELAEKCLRT---NYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           E      RT   NY+G+ R+   L+P ++      +VNVSS
Sbjct: 475 E------RTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSS 509

Length = 657

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 67.2 bits (165), Expect = 5e-14
 Identities = 28/85 (32%), Positives = 40/85 (47%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A +TG   GIG    +  A  G  V +  R  +    A E++  +        Q DV DP
Sbjct: 6  AFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQCDVRDP 65

Query: 62 ATIHSLADFVRSQFGKLDILVNNAA 86
            + +  D    +FGK+DIL+NNAA
Sbjct: 66 EAVEAAVDETLKEFGKIDILINNAA 90

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 67.1 bits (164), Expect = 5e-14
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 10/114 (8%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV--EKLKHSGFDSVIFHQLDVA 59
           A+VTGA++GIG     +LA+ G  + +    +      V  E L        I+ Q D+ 
Sbjct: 4   AIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGR--RAIYFQADIG 61

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIV 113
           + +   +L D     FG+LD LVNNA I  V   GD L     D     ++ ++
Sbjct: 62  ELSDHEALLDQAWEDFGRLDCLVNNAGI-AVRPRGDLL-----DLTEDSFDRLI 109

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 67.1 bits (164), Expect = 7e-14
 Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 26/156 (16%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS-VIFHQLDVADP 61
           ++TGAN GIG ET R+LA  G  V++  RD  +  EA  +++    +  VI   LD+A  
Sbjct: 5   IITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLASL 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGV--SVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
            +I + A    ++  +LD+L+NNA +     S   D   GF                   
Sbjct: 65  KSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTED---GF------------------- 102

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
            E     N+ G   +  +L+ LL+ S   RIVNVSS
Sbjct: 103 -EMQFGVNHLGHFLLTNLLLDLLKKSAPSRIVNVSS 137

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 66.7 bits (163), Expect = 7e-14
 Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTG  +GIG     +LA +G  V +   +E+   E  +++  +G  +V  ++LDV+D 
Sbjct: 3  ALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAV-AYKLDVSDK 61

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            + S  D    +FG  D++VNNA +
Sbjct: 62 DQVFSAIDQAAEKFGGFDVMVNNAGV 87

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 8e-14
 Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 22/170 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQ-LDVAD 60
             VTGA  GIG  T  +LA+ G  + LT RD   GL        +   +V  H+ LD++D
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRDA-DGLAQTVADARALGGTVPEHRALDISD 61

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              + + A  + +  G +D+++N A   G+S  G      V      +W  +V       
Sbjct: 62  YDAVAAFAADIHAAHGSMDVVMNIA---GISAWGT-----VDRLTHEQWRRMVD------ 107

Query: 121 EKCLRTNYYGSKRMCEVLIP-LLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
                 N  G   + E  +P ++       +VNVSS  G +   W  A  
Sbjct: 108 -----VNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYS 152

Length = 272

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 67.9 bits (167), Expect = 8e-14
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 2/90 (2%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG  T ++LA+ G  VVL   DE+    A  +L   G D  +    DV D 
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG--GPDRALGVACDVTDE 482

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVS 91
           A + +  +     FG +DI+V+NA I    
Sbjct: 483 AAVQAAFEEAALAFGGVDIVVSNAGIAISG 512

Length = 681

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 66.6 bits (163), Expect = 8e-14
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA++GIG+     LA  G  +V+ +R+E++  EA + ++  G         DV+D 
Sbjct: 8  ALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGV-EATAFTCDVSDE 66

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            I +  + +   FGK+DILVNNA I
Sbjct: 67 EAIKAAVEAIEEDFGKIDILVNNAGI 92

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 8e-14
 Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 4/98 (4%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLDVAD 60
           A+VTGA +GIG    R  A  G  V L   D      A   +        V+    DV D
Sbjct: 10  ALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTD 69

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALS 98
            A++ +        FG LD+LVNNA   G++V  D L+
Sbjct: 70  AASVAAAVAAAEEAFGPLDVLVNNA---GINVFADPLA 104

Length = 260

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 66.3 bits (162), Expect = 1e-13
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          AV+TG   GIG  T R+LA+ G  VV+   D + G  A +++        +F   DV D 
Sbjct: 10 AVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV------GGLFVPTDVTDE 63

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            +++L D     +G +DI  NNA I
Sbjct: 64 DAVNALFDTAAETYGSVDIAFNNAGI 89

Length = 255

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 66.9 bits (163), Expect = 1e-13
 Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 22/155 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS-VIFHQLDVAD 60
            ++TGAN GIG+ET R  A +G  V+L  R+  R   AV ++      + V    LD+A 
Sbjct: 4   IIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDLAS 63

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             ++   A+  +++   L +LV NAA+F +                  W    T T +  
Sbjct: 64  LRSVQRFAEAFKAKNSPLHVLVCNAAVFALP-----------------W----TLTEDGL 102

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           E   + N+ G   + ++L  +L+ S   R++ VSS
Sbjct: 103 ETTFQVNHLGHFYLVQLLEDVLRRSAPARVIVVSS 137

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 66.2 bits (162), Expect = 1e-13
 Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 16/157 (10%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TGA   IG    + L S G  ++L   +     +  E+L +   + VI  +LD+   
Sbjct: 5   ILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELDITSK 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            +I  L +    +FG++DIL+NNA      V G     F                YE   
Sbjct: 65  ESIKELIESYLEKFGRIDILINNAYP-SPKVWGSRFEEF---------------PYEQWN 108

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           + L  N  G+    +  I L +      I+N++S  G
Sbjct: 109 EVLNVNLGGAFLCSQAFIKLFKKQGKGSIINIASIYG 145

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 66.2 bits (162), Expect = 1e-13
 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 22/157 (14%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           ++TGA  G+G     + A  G  + L   +E+ G E ++ L+ +G D   + + DV D +
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDG-FYQRCDVRDYS 62

Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIK-WNEIVTPTYELAE 121
            + +LA     ++G +D++VNNA   GV     A  GF ++   ++ W+           
Sbjct: 63  QLTALAQACEEKWGGIDVIVNNA---GV-----ASGGFFEE-LSLEDWDWQ--------- 104

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
             +  N  G  + C+  +PL +     RIVN++S  G
Sbjct: 105 --IAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAG 139

Length = 270

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 65.9 bits (161), Expect = 2e-13
 Identities = 25/86 (29%), Positives = 44/86 (51%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TGA +GIG     +LA++G  +VL   + +   ++  +       + +    DV D 
Sbjct: 5  AIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTDK 64

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            + +L D    +FG  D++VNNA I
Sbjct: 65 DDVEALIDQAVEKFGSFDVMVNNAGI 90

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 65.9 bits (161), Expect = 2e-13
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 5/86 (5%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG   G+G ET R LA  G  V++ AR      EA+     +G D V    LD+AD 
Sbjct: 29  AIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREAL-----AGIDGVEVVMLDLADL 83

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAI 87
            ++ + A+       ++DIL+NNA +
Sbjct: 84  ESVRAFAERFLDSGRRIDILINNAGV 109

Length = 315

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 65.4 bits (160), Expect = 3e-13
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 23/171 (13%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
             ++TG + G G    ++L S G  V+     +       ++L+    D +   QLDV  
Sbjct: 2   AVLITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNG--PGAKELRRVCSDRLRTLQLDVTK 59

Query: 61  PATIHSLADFVRSQFGKLDI--LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
           P  I   A +V+   G+  +  LVNNA I G   D + L                   Y 
Sbjct: 60  PEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLP---------------MDDYR 104

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
              KC+  N +G+  + +  +PLL+ +   R+VNVSS  G++     GA C
Sbjct: 105 ---KCMEVNLFGTVEVTKAFLPLLRRAK-GRVVNVSSMGGRVPFPAGGAYC 151

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 65.1 bits (159), Expect = 3e-13
 Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 20/159 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG   GIG       A  G  V +    E        +L       V     DVADP
Sbjct: 14  VLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARL---PGAKVTATVADVADP 70

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A +  + D    +FG LD+LVNNA I G        +G + +  P +W + +        
Sbjct: 71  AQVERVFDTAVERFGGLDVLVNNAGIAG-------PTGGIDEITPEQWEQTLAVN----- 118

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
             L   +Y ++     +  L        I+ +SS  G+L
Sbjct: 119 --LNGQFYFARA---AVPLLKASGHGGVIIALSSVAGRL 152

Length = 264

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 64.6 bits (158), Expect = 4e-13
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 23/158 (14%)

Query: 1   YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDV 58
             ++TGA++GIG     +L   G   +VVL AR E        K +      V   + D+
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSE--EPLQELKEELRPGLRVTTVKADL 58

Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
           +D A +  L + +R   G+ D+L+NNA   G           V   E I  +E+      
Sbjct: 59  SDAAGVEQLLEAIRKLDGERDLLINNAGSLGP----------VSKIEFIDLDEL------ 102

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPR-IVNVSS 155
             +K    N      +   L+   +   L + +VNVSS
Sbjct: 103 --QKYFDLNLTSPVCLTSTLLRAFKKRGLKKTVVNVSS 138

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 4e-13
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
          A+VTG+++GIG +T + LA  G  VV+  R    R  + V +++ +G  +      D+ D
Sbjct: 9  ALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAV-GADLTD 67

Query: 61 PATIHSLADFVRSQFGKLDILVNNAA 86
            ++ +L D  R +FG LD LV NA+
Sbjct: 68 EESVAALMDTAREEFGGLDALVLNAS 93

Length = 248

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 65.0 bits (159), Expect = 4e-13
 Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 27/166 (16%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           ++TG + GIG    R L S+G  V  T R E    E V  L+  G ++    QLD A+P 
Sbjct: 8   LITGCSSGIGAYCARALQSDGWRVFATCRKE----EDVAALEAEGLEA---FQLDYAEPE 60

Query: 63  TIHSLADFVRSQF-GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           +I +L   V     G+LD L NN A            G V+D           PT  L  
Sbjct: 61  SIAALVAQVLELSGGRLDALFNNGAY--------GQPGAVED----------LPTEALRA 102

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           +    N++G   +   +IP+++     RIV  SS +G +   ++GA
Sbjct: 103 Q-FEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGA 147

Length = 277

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 6e-13
 Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 32/167 (19%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           +VTG   GIG     +LA  G I V+  R      E  E+L+     +  F Q+D+ D A
Sbjct: 11  IVTGGASGIGAAISLRLAEEGAIPVIFGRSA-PDDEFAEELRALQPRA-EFVQVDLTDDA 68

Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGV--SVDGDALS-GFVKDGEPIKWNEIVTPTYEL 119
                 +   ++FG++D LVNNA   GV   V  +A    FV     ++ N  +   Y +
Sbjct: 69  QCRDAVEQTVAKFGRIDGLVNNA---GVNDGVGLEAGREAFVAS---LERN--LIHYYVM 120

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQG 166
           A  CL               P L+ S    IVN+SS   K   T QG
Sbjct: 121 AHYCL---------------PHLKASR-GAIVNISS---KTALTGQG 148

Length = 258

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 64.1 bits (156), Expect = 7e-13
 Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 19/158 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK-LKHSGFDSVIFHQLDVAD 60
           A+VTGA+ GIG    R L  +G+ VV  AR   + +EA+    + +G+ ++  +Q D+++
Sbjct: 9   ALVTGASVGIGAAVARALVQHGMKVVGCARRVDK-IEALAAECQSAGYPTLFPYQCDLSN 67

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              I S+   +R+Q   +D+ +NNA +        A    +  G+   W E+        
Sbjct: 68  EEQILSMFSAIRTQHQGVDVCINNAGL--------ARPEPLLSGKTEGWKEMFDVNVLAL 119

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
             C R  Y   + M E  +      D   I+N++S  G
Sbjct: 120 SICTREAY---QSMKERNV------DDGHIININSMSG 148

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 64.1 bits (156), Expect = 9e-13
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 22/160 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG    R+L   G+ V + AR E+     V++L+ +G +       DV   
Sbjct: 6   ALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVE-ADGRTCDVRSV 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I +L     +++G +D+LVNNA   G    G A +    +     W ++V        
Sbjct: 65  PEIEALVAAAVARYGPIDVLVNNAGRSG----GGATAELADE----LWLDVVE------- 109

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLP--RIVNVSSNMGK 159
               TN  G  R+ + ++    + +    RI+N++S  GK
Sbjct: 110 ----TNLTGVFRVTKEVLKAGGMLERGTGRIINIASTGGK 145

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 64.0 bits (156), Expect = 1e-12
 Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 30/179 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL-EAVEKLKHSGFDSVIFHQLDVAD 60
           AV+TGA+ GIG  +   LA  G  V+  A D    + E V+K+K +G  +  +H +D++D
Sbjct: 9   AVITGASTGIGQASAIALAQEGAYVL--AVDIAEAVSETVDKIKSNGGKAKAYH-VDISD 65

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              +   A  ++ QFG++D+L NNA +               D    + +E   P  ++ 
Sbjct: 66  EQQVKDFASEIKEQFGRVDVLFNNAGV---------------DNAAGRIHEY--PV-DVF 107

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLK-------NTWQGAICYLT 172
           +K +  +  G+  M ++L+PL+ +     I+N SS  G+         N  +GA+   T
Sbjct: 108 DKIMAVDMRGTFLMTKMLLPLM-MEQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFT 165

Length = 272

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 1e-12
 Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 24/156 (15%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           ++TGA+ GIG     Q A  G  VV  AR E       +++  +G D++     D++D  
Sbjct: 44  LLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMA-VPCDLSDLD 102

Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVD---GDALSGFVKDGEPIKWNEIVTPTYEL 119
            + +L   V  + G +DIL+NNA   G S+     ++L          +W+++       
Sbjct: 103 AVDALVADVEKRIGGVDILINNA---GRSIRRPLAESLD---------RWHDV------- 143

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
            E+ +  NYY   R+   L P +       I+NV++
Sbjct: 144 -ERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVAT 178

Length = 293

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 64.1 bits (156), Expect = 1e-12
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 8/90 (8%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL--KHSGFDSVIFHQLDVA 59
           +VTGA  GIG    ++ A  G  VV+  R+ +R  E  + L   H          +DV+
Sbjct: 8  VLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHAL------AMDVS 61

Query: 60 DPATIHSLADFVRSQFGKLDILVNNAAIFG 89
          D A I    + +  +FG++D+LVNNA +  
Sbjct: 62 DEAQIREGFEQLHREFGRIDVLVNNAGVTD 91

Length = 520

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 63.1 bits (154), Expect = 1e-12
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 1  YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A++TG   GIG ET RQ  + G  V +T RD      ++E  +    +S +  + D  D
Sbjct: 8  TALITGGTSGIGLETARQFLAEGARVAITGRDP----ASLEAARAELGESALVIRADAGD 63

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAIFGVSV 92
           A   +LA  +   FG+LD +  NA   GV+ 
Sbjct: 64 VAAQKALAQALAEAFGRLDAVFINA---GVAK 92

Length = 249

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 62.9 bits (153), Expect = 2e-12
 Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 19/154 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA +GIG    R+L ++G  V+ T        +   +      D V   +LDV D 
Sbjct: 5   ALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDT 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                    +  + G +DILVNNA   G++ D    S F +     +WN++         
Sbjct: 65  EECAEALAEIEEEEGPVDILVNNA---GITRD----SVFKRMS-HQEWNDV--------- 107

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
             + TN      + + L   +      RI+N+SS
Sbjct: 108 --INTNLNSVFNVTQPLFAAMCEQGYGRIINISS 139

Length = 245

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 4/87 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TGA  GIG     +  + G  VV+      R   A  ++  +     I   LDV   
Sbjct: 9  ALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPA----AIAVSLDVTRQ 64

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIF 88
           +I  +      +FG +DIL NNAA+F
Sbjct: 65 DSIDRIVAAAVERFGGIDILFNNAALF 91

Length = 257

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 31/156 (19%)

Query: 4   VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
           +TGA++G G          G  VV TARD       +  L     D ++   LDV D A 
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARD----TATLADLAEKYGDRLLPLALDVTDRAA 63

Query: 64  IHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKC 123
           + +  +     FG+LDI+VNNA        G  L G ++               E+ E  
Sbjct: 64  VFAAVETAVEHFGRLDIVVNNA--------GYGLFGMIE---------------EVTESE 100

Query: 124 LR----TNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
            R    TN++G+  + + ++P L+      I+ +SS
Sbjct: 101 ARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISS 136

Length = 275

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 62.9 bits (153), Expect = 2e-12
 Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 27/159 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG ++GIG    +     G  V+++AR  +   +A E+L  S +   I    D++  
Sbjct: 9   VLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEEL--SAYGECIAIPADLSSE 66

Query: 62  ATIHSLADFVRSQFGKLDILVNNA-AIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             I +L   V  +  +LD+LVNNA A +G  ++    SG+                    
Sbjct: 67  EGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGW-------------------- 106

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLS----DLPRIVNVSS 155
           +K +  N      + + L+PLL+ +    +  R++N+ S
Sbjct: 107 DKVMDINVKSVFFLTQALLPLLRAAATAENPARVINIGS 145

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 62.4 bits (152), Expect = 2e-12
 Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 36/166 (21%)

Query: 2   AVVTGANKGIGYETVRQLASNGII-VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
            +VTGAN+GIG   V  L ++G   V    RD      +   L     D V+  +LDV D
Sbjct: 6   VLVTGANRGIGKAFVESLLAHGAKKVYAAVRD----PGSAAHLVAKYGDKVVPLRLDVTD 61

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           P +I + A     Q   +D+++NNA +                       +  T   E A
Sbjct: 62  PESIKAAAA----QAKDVDVVINNAGVL----------------------KPATLLEEGA 95

Query: 121 EKCLR----TNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
            + L+     N +G  R+ +   P+L+ +    IVN++S +  LKN
Sbjct: 96  LEALKQEMDVNVFGLLRLAQAFAPVLKANGGGAIVNLNS-VASLKN 140

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 10/108 (9%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            VVTGA +GIG E  R+L + G  + L   +E   L A+        D V+    DV D 
Sbjct: 12  VVVTGAARGIGAELARRLHARGAKLALVDLEEAE-LAALAAELGGD-DRVLTVVADVTDL 69

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKW 109
           A + + A+    +FG +D++V NA I        A  G V   +P  +
Sbjct: 70  AAMQAAAEEAVERFGGIDVVVANAGI--------ASGGSVAQVDPDAF 109

Length = 296

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +VTGA +GIGY   R LA  G  V    R+ ++ LE V  L+  G+    + +LDVAD 
Sbjct: 1  VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATY-KLDVADS 59

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
          A +  +   +  ++G +D+LVN A I
Sbjct: 60 AAVDEVVQRLEREYGPIDVLVNVAGI 85

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 62.7 bits (152), Expect = 3e-12
 Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 21/159 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA-VEKLKHSGFDSVIFHQLDVAD 60
           A+VTG  KGIG      LA  G  VV+     K   E  V +L   G D V   Q DV+ 
Sbjct: 9   AIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHD-VYAVQADVSK 67

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
               + L +   + FGK+DILVNNA             G  +D    K N       E  
Sbjct: 68  VEDANRLVEEAVNHFGKVDILVNNA-------------GITRDRTFKKLNR------EDW 108

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
           E+ +  N          ++P +  ++  RI+++SS +G+
Sbjct: 109 ERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ 147

Length = 247

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 62.5 bits (152), Expect = 3e-12
 Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 5/86 (5%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQL--DVA 59
          A+VTG+++GIGY     LA  G  V+L  RD  +   A E LK  G  +   H L  DV 
Sbjct: 13 ALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSA---HALAFDVT 69

Query: 60 DPATIHSLADFVRSQFGKLDILVNNA 85
          D   + +  D   ++ G +DILVNNA
Sbjct: 70 DHDAVRAAIDAFEAEIGPIDILVNNA 95

Length = 255

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 62.3 bits (152), Expect = 3e-12
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 1  YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
           A+VTG  +G+G    R  A  G   +V+  R+ ++G     +L+  G    +F Q D++
Sbjct: 8  VALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAK-AVFVQADLS 66

Query: 60 DPATIHSLADFVRSQFGKLDILVNNAAI 87
          D      +       FG+LD LVN A +
Sbjct: 67 DVEDCRRVVAAADEAFGRLDALVNAAGL 94

Length = 260

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 62.3 bits (152), Expect = 3e-12
 Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 11/108 (10%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGF--DSVIFHQLD 57
            A+VTGA++GIG    + LA  G  V++++R +  G +AV + +  +G   +++  H   
Sbjct: 10  IALVTGASRGIGEAIAKLLAQQGAHVIVSSR-KLDGCQAVADAIVAAGGKAEALACH--- 65

Query: 58  VADPATIHSLADFVRSQFGKLDILVNNAAI---FGVSVDGDALSGFVK 102
           + +   I +L   +R + G+LDILVNNAA    FG  +D D L  F K
Sbjct: 66  IGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTD-LGAFQK 112

Length = 252

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 62.5 bits (152), Expect = 4e-12
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 6/154 (3%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AV+TG    +G    R LA  G  V    R++++G +  +++   G  + I    DV D 
Sbjct: 8   AVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRA-IALAADVLDR 66

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A++    + + +QFG +DIL+N A   G   D        +      + ++     E  E
Sbjct: 67  ASLERAREEIVAQFGTVDILINGAG--GNHPDATTDPEHYEPETEQNFFDL---DEEGWE 121

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                N  GS    +V    +       I+N+SS
Sbjct: 122 FVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISS 155

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 62.1 bits (151), Expect = 4e-12
 Identities = 53/168 (31%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TG + GIG        + G  V  TAR      E VE L  +GF +V   QLDV D 
Sbjct: 4   VLITGCSSGIGRALADAFKAAGYEVWATARK----AEDVEALAAAGFTAV---QLDVNDG 56

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A +  LA+ + ++ G LD+L+NNA   G    G  L G V                E   
Sbjct: 57  AALARLAEELEAEHGGLDVLINNA---GYGAMGPLLDGGV----------------EAMR 97

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
           +   TN +    +   L PLL+ S    +VN+ S  G L   + GA C
Sbjct: 98  RQFETNVFAVVGVTRALFPLLRRSR-GLVVNIGSVSGVLVTPFAGAYC 144

Length = 274

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 5e-12
 Identities = 38/157 (24%), Positives = 57/157 (36%), Gaps = 22/157 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
             +TG   G+G  T   LA+ G  V L  R      + +  +            +D+ DP
Sbjct: 10  VAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALR---IGGIDLVDP 66

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                  D V  QFG+LD LVN A  F        + G + DG+   W           +
Sbjct: 67  QAARRAVDEVNRQFGRLDALVNIAGAF--------VWGTIADGDADTW-----------D 107

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           +    N   +    +  +P L  S   RIVN+ +   
Sbjct: 108 RMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAA 144

Length = 239

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 61.5 bits (150), Expect = 6e-12
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 5/86 (5%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
          A++TGA+ GIG  T    A  G  + L AR +   LEA+  +L+ +G      + +D+++
Sbjct: 9  ALITGASSGIGKATALAFAKAGWDLALVARSQDA-LEALAAELRSTG-VKAAAYSIDLSN 66

Query: 61 PATI-HSLADFVRSQFGKLDILVNNA 85
          P  I   +A+ +  QFG  D+L+NNA
Sbjct: 67 PEAIAPGIAELL-EQFGCPDVLINNA 91

Length = 241

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 7e-12
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIF-HQLDVAD 60
          AVVTG   GIG+      A+ G  V L  R E      V ++              DV+D
Sbjct: 18 AVVTGGASGIGHAIAELFAAKGARVALLDRSE-----DVAEVAAQLLGGNAKGLVCDVSD 72

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
            ++ +    V S FG++DILVN+A +
Sbjct: 73 SQSVEAAVAAVISAFGRIDILVNSAGV 99

Length = 255

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 7e-12
 Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 1/84 (1%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          ++TG + G+G    ++ A  G  VV+T R +++  EA  +++      V+  Q+DV +P 
Sbjct: 5  IITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFP-GQVLTVQMDVRNPE 63

Query: 63 TIHSLADFVRSQFGKLDILVNNAA 86
           +  + + +  +FG++D L+NNAA
Sbjct: 64 DVQKMVEQIDEKFGRIDALINNAA 87

Length = 252

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 61.3 bits (149), Expect = 7e-12
 Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 21/160 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AVVTGA +G+G       A  G  V++ AR E +  E  E+++ +G  + +    D+A P
Sbjct: 13  AVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVV-AADLAHP 71

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                LA      FG+LDI+VNN       V G   +  +            T T +LA+
Sbjct: 72  EATAGLAGQAVEAFGRLDIVVNN-------VGGTMPNPLLS-----------TSTKDLAD 113

Query: 122 KCLRTNYYGSKRMCEVLIPL-LQLSDLPRIVNVSSNMGKL 160
                N   +  +    +PL L+ S    ++N+SS MG+L
Sbjct: 114 -AFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL 152

Length = 263

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 61.4 bits (149), Expect = 7e-12
 Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 31/154 (20%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG ++GIG   V +L   G  V+     E      V+  K           +DV++ 
Sbjct: 9   AIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-DVDYFK-----------VDVSNK 56

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +    D+V S++G++DILVNNA I           G +   E  +W+ I+        
Sbjct: 57  EQVIKGIDYVISKYGRIDILVNNAGI--------ESYGAIHAVEEDEWDRIIN------- 101

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                N  G   M +  IP +   D   I+N++S
Sbjct: 102 ----VNVNGIFLMSKYTIPYMLKQDKGVIINIAS 131

Length = 258

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 60.8 bits (148), Expect = 1e-11
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 2   AVVTGA-NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQL-DVA 59
            +VT A   GIG  T R+    G  VV++   E+R  E  ++L        +   + DV 
Sbjct: 20  VLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVT 79

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFG 89
             A + +L D    + G+LD+LVNNA + G
Sbjct: 80  SEAQVDALIDAAVERLGRLDVLVNNAGLGG 109

Length = 262

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 60.8 bits (148), Expect = 1e-11
 Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 20/159 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK-LKHSGFDSVIFHQLDVAD 60
            ++TGA+ GIG  T R+ A  G  ++LT R  +R L+ +   L       V+  QLDV+D
Sbjct: 3   VLITGASSGIGEATARRFAKAGAKLILTGRRAER-LQELADELGAKFPVKVLPLQLDVSD 61

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             +I +  + +  +F  +DILVNNA   G+++  D      ++ +   W  ++       
Sbjct: 62  RESIEAALENLPEEFRDIDILVNNA---GLALGLDP----AQEADLEDWETMID------ 108

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
                TN  G   +  +++P++   +   I+N+ S  G+
Sbjct: 109 -----TNVKGLLNVTRLILPIMIARNQGHIINLGSIAGR 142

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 60.3 bits (147), Expect = 2e-11
 Identities = 42/153 (27%), Positives = 60/153 (39%), Gaps = 23/153 (15%)

Query: 4   VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
           +TGA  GIG  T    A+ G  V     +E  GL A+      G  +     LDV D A 
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEA-GLAALAAEL--GAGNAWTGALDVTDRAA 62

Query: 64  I-HSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEK 122
              +LADF  +  G+LD+L NNA   G+   G                       E  ++
Sbjct: 63  WDAALADFAAATGGRLDVLFNNA---GILRGGP----------------FEDIPLEAHDR 103

Query: 123 CLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
            +  N  G        +P L+ +   R++N SS
Sbjct: 104 VIDINVKGVLNGAHAALPYLKATPGARVINTSS 136

Length = 260

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 60.3 bits (146), Expect = 2e-11
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          AVVTGA  GIG E   +LA  G  V +   ++  G  AV    +      I   +DV + 
Sbjct: 10 AVVTGAASGIGKEIALELARAGAAVAIADLNQD-GANAVADEINKAGGKAIGVAMDVTNE 68

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            +++  D V  +FG +DILV+NA I
Sbjct: 69 DAVNAGIDKVAERFGSVDILVSNAGI 94

Length = 262

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 60.2 bits (146), Expect = 2e-11
 Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 17/157 (10%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
           A+VTGA++GIG     QL   G  V +T R     L    E+++  G   +   + D +D
Sbjct: 6   ALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPV-RCDHSD 64

Query: 61  PATIHSLADFVRS-QFGKLDILVNNA-AIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
              + +L + V   Q G+LDILVNNA A   + + G A   + +   P  W++I      
Sbjct: 65  DDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEP--PTIWDDINNVG-- 120

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                LR +Y  S     +++   +      IV +SS
Sbjct: 121 -----LRAHYACSVYAAPLMVKAGK----GLIVIISS 148

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 59.9 bits (146), Expect = 2e-11
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 10/86 (11%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            VTGA +GIGY         G  V+   +            +   F +     LDV+D 
Sbjct: 11 VWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLT-------QEDYPFAT---FVLDVSDA 60

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
          A +  +   + ++ G LD+LVN A I
Sbjct: 61 AAVAQVCQRLLAETGPLDVLVNAAGI 86

Length = 252

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 60.5 bits (147), Expect = 2e-11
 Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS-VIFHQLDVAD 60
           AVVTGA+ G+G    R+LA+ G  V+L  R+  +G  AV  ++ +  D+ +    LD++ 
Sbjct: 17  AVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS 76

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAI 87
            A++ +L + +R++   + +L+NNA +
Sbjct: 77  LASVAALGEQLRAEGRPIHLLINNAGV 103

Length = 313

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 59.7 bits (145), Expect = 2e-11
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 8/112 (7%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG ++GIG    R LA  G  V +      R  E  E+L          ++ DV+  
Sbjct: 11  AIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCDVSSQ 70

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIV 113
            ++      ++  FGK+DIL+ NA   G++V   AL     D    +WN+++
Sbjct: 71  ESVEKTFKQIQKDFGKIDILIANA---GITVHKPAL-----DYTYEQWNKVI 114

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 60.0 bits (146), Expect = 3e-11
 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          AV+TGA  G G    R  A+ G+ +VL    +     AV +L+  G + V+  + DV+D 
Sbjct: 9  AVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAE-VLGVRTDVSDA 67

Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
          A + +LAD    +FG + +L NNA
Sbjct: 68 AQVEALADAALERFGAVHLLFNNA 91

Length = 287

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 3e-11
 Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           ++TGA+KGIG       A+ G  + L ARD          L+ +    V  H LD++ P
Sbjct: 10 VLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSP 69

Query: 62 ATIHSLADFVRSQFGKLDILVNNA-AIFGVSVD 93
               LA       G +DILVNNA AI G  +D
Sbjct: 70 EAREQLAAEA----GDIDILVNNAGAIPGGGLD 98

Length = 259

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 3e-11
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTG    IG    R L + G  V +   D   G      L     +   F   D+ D 
Sbjct: 9  AIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG----ERARFIATDITDD 64

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFG 89
          A I      V ++FG++DILVN A  + 
Sbjct: 65 AAIERAVATVVARFGRVDILVNLACTYL 92

Length = 261

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 59.5 bits (144), Expect = 3e-11
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTG   GIG +        G  VV    DE+RG +  E        ++ F   DVAD 
Sbjct: 4  AIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEG----PNLFFVHGDVADE 59

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            +  +   +  + G++D+LVNNAA 
Sbjct: 60 TLVKFVVYAMLEKLGRIDVLVNNAAR 85

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 59.3 bits (144), Expect = 4e-11
 Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 5/86 (5%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVA 59
          A+VTG+ +G+G+E  R LA  G  V++  R+      AV  L+ +G   +++ F   D+A
Sbjct: 14 ALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAF---DIA 70

Query: 60 DPATIHSLADFVRSQFGKLDILVNNA 85
          D   + +    + ++ G+LDILVNN 
Sbjct: 71 DEEAVAAAFARIDAEHGRLDILVNNV 96

Length = 256

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 59.4 bits (144), Expect = 4e-11
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTG   GIG  T    A  G  VV+  RD   G E V  ++ +G ++ +F   DV   
Sbjct: 10 ALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEA-LFVACDVTRD 68

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
          A + +L +   + +G+LD   NNA I
Sbjct: 69 AEVKALVEQTIAAYGRLDYAFNNAGI 94

Length = 253

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 58.9 bits (143), Expect = 5e-11
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 13/97 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL------------EAVEKLKHSGFD 49
           A VTGA++GIG     +LA  G  VV+ A+    G             E  E+++ +G  
Sbjct: 6   AFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGGQ 65

Query: 50  SVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAA 86
           ++    +DV D   + +L +    QFG+LDILVNNA 
Sbjct: 66  ALPI-VVDVRDEDQVRALVEATVDQFGRLDILVNNAG 101

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 58.8 bits (143), Expect = 5e-11
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          AVVTG   G+G  TV +L + G  VV+       G E V KL     D+  F  +DV   
Sbjct: 5  AVVTGGASGLGLATVERLLAQGAKVVILDLPNSPG-ETVAKLG----DNCRFVPVDVTSE 59

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            + +     +++FG+LDI+VN A I
Sbjct: 60 KDVKAALALAKAKFGRLDIVVNCAGI 85

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 59.0 bits (143), Expect = 5e-11
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TG   GIG  T R  A +G  VV+   D+  G     +L   G   + F   DV   
Sbjct: 7  AIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAEL---GDPDISFVHCDVTVE 63

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFG 89
          A + +  D   ++FG+LDI+ NNA + G
Sbjct: 64 ADVRAAVDTAVARFGRLDIMFNNAGVLG 91

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 58.8 bits (143), Expect = 6e-11
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA-VEKLKHSGFDSVIFHQLDVAD 60
          A++TG  + IG    R L + G  V +         +A   +L      S    Q D+ D
Sbjct: 9  ALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD 68

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAIF 88
          P  +  L     + FG+LD LVNNA+ F
Sbjct: 69 PDALPELVAACVAAFGRLDALVNNASSF 96

Length = 249

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 58.5 bits (142), Expect = 7e-11
 Identities = 41/158 (25%), Positives = 57/158 (36%), Gaps = 28/158 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TGA+ GIG    R+ A  G  V L AR   R  E   +L  +   SV    LDV D 
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELL-NPNPSVEVEILDVTDE 59

Query: 62  A----TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTY 117
                 I  L        G LD+++ NA   GV           K               
Sbjct: 60  ERNQLVIAELEAE----LGGLDLVIINA---GVGKGTSLGDLSFKA------------FR 100

Query: 118 ELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           E  +    TN  G+  + E  +P  +      +V +SS
Sbjct: 101 ETID----TNLLGAAAILEAALPQFRAKGRGHLVLISS 134

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 59.1 bits (143), Expect = 7e-11
 Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 22/160 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
            V+TGA+ G+G    + LA  G   VV+  RD  +  +A +++        + H  D+A 
Sbjct: 4   VVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLH-CDLAS 62

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             ++    D  R     LD LV NAA++   +       F  DG            +EL 
Sbjct: 63  LDSVRQFVDNFRRTGRPLDALVCNAAVY---LPTAKEPRFTADG------------FELT 107

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDL--PRIVNVSSNMG 158
              +  N+ G   +  +L+  LQ S+   PRIV V S   
Sbjct: 108 ---VGVNHLGHFLLTNLLLEDLQRSENASPRIVIVGSITH 144

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 58.2 bits (141), Expect = 8e-11
 Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 23/156 (14%)

Query: 4   VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
           +TGA  GIG ET    A NG  V L   DE  GL A+      G ++V+   LDV D A 
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDED-GLAAL--AAELGAENVVAGALDVTDRAA 61

Query: 64  IH-SLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEK 122
              +LADF  +  G+LD L NNA +                G    + ++        ++
Sbjct: 62  WAAALADFAAATGGRLDALFNNAGV----------------GRGGPFEDV---PLAAHDR 102

Query: 123 CLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
            +  N  G        +P L+ +   R++N +S+  
Sbjct: 103 MVDINVKGVLNGAYAALPYLKATPGARVINTASSSA 138

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 58.3 bits (141), Expect = 9e-11
 Identities = 32/83 (38%), Positives = 41/83 (49%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          +VTG ++GIG   VR    NG  VV  AR E  G     +L  +G  S  F   DV    
Sbjct: 13 IVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDVTKEE 72

Query: 63 TIHSLADFVRSQFGKLDILVNNA 85
           I +L      +FG++D LVNNA
Sbjct: 73 DIKTLISVTVERFGRIDCLVNNA 95

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.3 bits (141), Expect = 9e-11
 Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 27/159 (16%)

Query: 1   YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            A++TG  +GIG          G  + VL    E    E  EK            + DV 
Sbjct: 9   VALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK------GVFTI-KCDVG 61

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           +   +    + V  +FG++D+LVNNA I  +                + + E     Y  
Sbjct: 62  NRDQVKKSKEVVEKEFGRVDVLVNNAGIMYL----------------MPFEEFDEEKY-- 103

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
             K ++ N  G+       +PLL+LS    IVN++SN G
Sbjct: 104 -NKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAG 141

Length = 255

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 58.2 bits (141), Expect = 9e-11
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA  G G    R+ A  G  VV+   +        E++     ++ I  Q DV   
Sbjct: 8  AIVTGAGSGFGEGIARRFAQEGARVVIADINADGA----ERVAADIGEAAIAIQADVTKR 63

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
          A + ++ +   S+FG+LDILVNNA I
Sbjct: 64 ADVEAMVEAALSKFGRLDILVNNAGI 89

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 57.9 bits (140), Expect = 1e-10
 Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 16/156 (10%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTGA++G+G    R  A  G  VV+   +  R  E+ E +     +  I  Q DV D 
Sbjct: 3   VLVTGASRGLGAAIARSFAREGARVVV---NYYRSTESAEAVAAEAGERAIAIQADVRDR 59

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + ++ +  ++ FG +D +VNN           AL  F  D +  K  +  T  +E  +
Sbjct: 60  DQVQAMIEEAKNHFGPVDTIVNN-----------ALIDFPFDPDQRKTFD--TIDWEDYQ 106

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM 157
           + L     G+  + + ++P  +     R++N+ +N+
Sbjct: 107 QQLEGAVKGALNLLQAVLPDFKERGSGRVINIGTNL 142

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 57.8 bits (140), Expect = 1e-10
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 2/87 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           V+TG + G+G     +       VV+  R DE+   +  E++K +G +++     DV  
Sbjct: 10 VVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKG-DVTV 68

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
           + + +L      +FG LD+++NNA I
Sbjct: 69 ESDVVNLIQTAVKEFGTLDVMINNAGI 95

Length = 261

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.3 bits (142), Expect = 2e-10
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 14/91 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVL----TARDEKRGLEAV-EKLKHSGFDSVIFHQL 56
           A+VTGA +GIG      LA +G  VV      A +    L AV  ++  +         L
Sbjct: 213 ALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEA---LAAVANRVGGTAL------AL 263

Query: 57  DVADPATIHSLADFVRSQFGKLDILVNNAAI 87
           D+  P     +A+ +  + G LDI+V+NA I
Sbjct: 264 DITAPDAPARIAEHLAERHGGLDIVVHNAGI 294

Length = 450

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 57.5 bits (139), Expect = 2e-10
 Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 21/159 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TGA +GIG    R  A +G  ++L     +   +  ++L   G         DV DP
Sbjct: 9   ALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAV-VADVRDP 66

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A++ +     + + G++DILVNNA   GV      L  F+   +            E  +
Sbjct: 67  ASVAAAIKRAKEKEGRIDILVNNA---GVCR----LGSFLDMSD------------EDRD 107

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
             +  N  G   + + ++P +      RIV +SS  G +
Sbjct: 108 FHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM 146

Length = 263

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 57.5 bits (139), Expect = 2e-10
 Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 20/166 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+V GA+ GIG  T  +LA+ G  V L AR  ++  E V+K++  G ++V F  LDV DP
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFP-LDVTDP 71

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            ++ S         G++++LV+ A                 D    K +EI T  +   E
Sbjct: 72  DSVKSFVAQAEEALGEIEVLVSGAG----------------DTYFGKLHEISTEQF---E 112

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
             ++ +  G+ R+   ++P +       ++ V S++   +    GA
Sbjct: 113 SQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGA 158

Length = 274

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 57.2 bits (138), Expect = 2e-10
 Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA +GIG      L + G  VVL   D +RG +  + L     ++  F  +DVAD 
Sbjct: 13 ALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG----ENAWFIAMDVADE 68

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
          A + +    V  QFG+LD LV NAAI
Sbjct: 69 AQVAAGVAEVLGQFGRLDALVCNAAI 94

Length = 255

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 9/84 (10%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +VTG  +GIG    R   + G  VV+  R     ++              FH  DV DP
Sbjct: 9  VLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGR---------PAEFHAADVRDP 59

Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
            + +L D +  + G+LD+LVNNA
Sbjct: 60 DQVAALVDAIVERHGRLDVLVNNA 83

Length = 252

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 56.8 bits (138), Expect = 3e-10
 Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 22/158 (13%)

Query: 4   VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV--EKLKHSGFDSVIFH-QLDVAD 60
           VTGA  GIG E     A +G  V+L  R E++ LEAV  E     G    I    L  A 
Sbjct: 17  VTGAGDGIGREAALTYARHGATVILLGRTEEK-LEAVYDEIEAAGGPQPAIIPLDLLTAT 75

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           P     LAD +  QFG+LD +++NA + G     +     V       W ++        
Sbjct: 76  PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEV-------WQDV-------- 120

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
              ++ N   +  + + L+PLL  S    +V  SS++G
Sbjct: 121 ---MQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVG 155

Length = 247

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 57.2 bits (138), Expect = 4e-10
 Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK--LKHSGFDSVIFHQLDVA 59
           A VTG   GIG ET R+LA+ G  VVL   + +   EAV        G    +  ++DV 
Sbjct: 417 AFVTGGAGGIGRETARRLAAEGAHVVLADLNLEA-AEAVAAEINGQFGAGRAVALKMDVT 475

Query: 60  D-PATIHSLADFVRSQFGKLDILVNNAAIF 88
           D  A   + AD   + +G +DI+VNNA I 
Sbjct: 476 DEQAVKAAFADVALA-YGGVDIVVNNAGIA 504

Length = 676

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 56.3 bits (136), Expect = 4e-10
 Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 9/89 (10%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHSGFDSVIFHQL--DV 58
          A+VTGAN G+G      LA  G  +V   R E     + VE L         F  L  D+
Sbjct: 8  ALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGR------RFLSLTADL 61

Query: 59 ADPATIHSLADFVRSQFGKLDILVNNAAI 87
          +D   I +L D    +FG +DILVNNA I
Sbjct: 62 SDIEAIKALVDSAVEEFGHIDILVNNAGI 90

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 56.3 bits (136), Expect = 5e-10
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA +GIG+   ++L  +G  V +   +E+    A +KL   G  ++   + DV+D 
Sbjct: 5  ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAV-KADVSDR 63

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            + +    V   FG L+++VNNA +
Sbjct: 64 DQVFAAVRQVVDTFGDLNVVVNNAGV 89

Length = 256

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 5e-10
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 31/161 (19%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++ GA++GIG E VRQ  ++G  V+ TARD      A+  L+  G ++     LDVADP
Sbjct: 4   VLIVGASRGIGREFVRQYRADGWRVIATARDA----AALAALQALGAEA---LALDVADP 56

Query: 62  ATIHSLADFVRSQFG--KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           A++  LA     +     LD  V  A ++G   +G                 +   T E 
Sbjct: 57  ASVAGLA----WKLDGEALDAAVYVAGVYGPRTEG-----------------VEPITRED 95

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
            +  + TN  G  ++  +L+PL++ +    +  +SS MG +
Sbjct: 96  FDAVMHTNVLGPMQLLPILLPLVEAAG-GVLAVLSSRMGSI 135

Length = 222

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 55.5 bits (134), Expect = 8e-10
 Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 24/161 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK-LKHSGFDSVIFHQL--DV 58
           A++TG++ GIG  T    A  G  + LT RD +R LE   +    +G        +  D+
Sbjct: 6   AIITGSSSGIGAGTAILFARLGARLALTGRDAER-LEETRQSCLQAGVSEKKILLVVADL 64

Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
            +      +     ++FG+LDILVNNA I              K G             E
Sbjct: 65  TEEEGQDRIISTTLAKFGRLDILVNNAGILA------------KGG-------GEDQDIE 105

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
             +K +  N      + ++ +P L +     IVNVSS  G 
Sbjct: 106 EYDKVMNLNLRAVIYLTKLAVPHL-IKTKGEIVNVSSVAGG 145

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 55.6 bits (134), Expect = 1e-09
 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
             +TG  +GIG     + A+ G  +++  RD     E  +KL  +  D  +  Q D+ D 
Sbjct: 272 VAITGGARGIGRAVADRFAAAGDRLLIIDRDA----EGAKKLAEALGDEHLSVQADITDE 327

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAI 87
           A + S    +++++G+LD+LVNNA I
Sbjct: 328 AAVESAFAQIQARWGRLDVLVNNAGI 353

Length = 520

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 10/84 (11%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTG  KGIG  TV +L   G  VV TAR     L           + V F   D+   
Sbjct: 12 ALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLP----------EGVEFVAADLTTA 61

Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
              ++A  V  + G +DILV+  
Sbjct: 62 EGCAAVARAVLERLGGVDILVHVL 85

Length = 260

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 21/155 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTG   GIG    ++LA +G  V      +E+R    +++    GFD     + DV+ 
Sbjct: 3   ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFD-FRVVEGDVSS 61

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             +  +    V ++ G +D+LVNNA   G++ D        K     +W+ ++       
Sbjct: 62  FESCKAAVAKVEAELGPIDVLVNNA---GITRD-----ATFKKMTYEQWSAVI------- 106

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                TN      + + +I  ++     RI+N+SS
Sbjct: 107 ----DTNLNSVFNVTQPVIDGMRERGWGRIINISS 137

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.4 bits (134), Expect = 1e-09
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 6/103 (5%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           V+TG  +G+G      LA  G  + L   ++++  EAV +    G +   +   +V D  
Sbjct: 9   VITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGY-AANVTDEE 67

Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGE 105
            + +    +   FG+L+ L+NNA I       D L    KDG+
Sbjct: 68  DVEATFAQIAEDFGQLNGLINNAGIL-----RDGLLVKAKDGK 105

Length = 253

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 55.5 bits (134), Expect = 1e-09
 Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           ++TG+ +GIG+     LA  G  +++     +R   AV KL+  G  +      +V   
Sbjct: 12 ILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAA-PFNVTHK 70

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            + +  + +    G +D+L+NNA I
Sbjct: 71 QEVEAAIEHIEKDIGPIDVLINNAGI 96

Length = 254

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 54.5 bits (131), Expect = 2e-09
 Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 21/161 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TGA  GIG E     A+ G  VV++  +       V++++  G  +    + D+   
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFAC-RCDITSE 72

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +LADF  S+ GK+DILVNNA        G     F       +        YEL  
Sbjct: 73  QELSALADFALSKLGKVDILVNNAG-------GGGPKPFDMPMADFRR------AYEL-- 117

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
                N +    + +++ P ++ +    I+ ++S   + KN
Sbjct: 118 -----NVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN 153

Length = 255

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 2e-09
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG N G+G      LA  G  +++T        +   +L       V F Q+D+  P
Sbjct: 18  AIVTGGNTGLGQGYAVALAKAGADIIITTHGT--NWDETRRLIEKEGRKVTFVQVDLTKP 75

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAI 87
            +   +      +FGK+DILVNNA  
Sbjct: 76  ESAEKVVKEALEEFGKIDILVNNAGT 101

Length = 258

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 54.7 bits (132), Expect = 2e-09
 Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 19/111 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VT ++ GIG      LA  G  + +T   DE+   E  E+++  G  + I  QLD++D
Sbjct: 5   AIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEI-RQLDLSD 63

Query: 61  PATIHSLADFVRSQFGKLDILVNNA-----------------AIFGVSVDG 94
                   D +  + G++D+LVNNA                  IF V VDG
Sbjct: 64  LPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDG 114

Length = 256

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.3 bits (131), Expect = 2e-09
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 17/157 (10%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG ++G+G    R  A  G  VV+     +   +A E L     D  I  Q DV D 
Sbjct: 8   VLVTGGSRGLGAAIARAFAREGARVVVNYHQSE---DAAEALADELGDRAIALQADVTDR 64

Query: 62  ATIHSLADFVRSQFGK-LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             + ++       FGK +  +VNNA     S DGDA        + I W        E  
Sbjct: 65  EQVQAMFATATEHFGKPITTVVNNALA-DFSFDGDARKKA----DDITW--------EDF 111

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM 157
           ++ L  +  G+    +  +P ++     RI+N+ +N+
Sbjct: 112 QQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNL 148

Length = 253

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 54.0 bits (130), Expect = 3e-09
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 4/90 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA+ G+G    + LA  G  VVL +R  +R  E   +++  G  + +   LDV D 
Sbjct: 12 ALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVV-SLDVTDY 70

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFGVS 91
           +I +      ++ G +DILVNN+   GVS
Sbjct: 71 QSIKAAVAHAETEAGTIDILVNNS---GVS 97

Length = 258

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 54.0 bits (130), Expect = 3e-09
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%)

Query: 4  VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
          VTGA  G G    R+    G  V+ T R ++R    +++LK    D++   QLDV + A 
Sbjct: 5  VTGATAGFGECITRRFIQQGHKVIATGRRQER----LQELKDELGDNLYIAQLDVRNRAA 60

Query: 64 IHSLADFVRSQFGKLDILVNNAAI 87
          I  +   + +++  +D+LVNNA +
Sbjct: 61 IEEMLASLPAEWRNIDVLVNNAGL 84

Length = 248

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 53.6 bits (129), Expect = 4e-09
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVAD 60
           VVTG+ +GIG     +LA  G +VV+ A+       E ++ +K +G + +     DV+ 
Sbjct: 9  VVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGV-LADVST 67

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
               +LA     ++G  DILVNNA +
Sbjct: 68 REGCETLAKATIDRYGVADILVNNAGL 94

Length = 252

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 5e-09
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 10/85 (11%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          +VTG + GIG   V++L +NG  VV    D   G       +H   ++  F   DV+   
Sbjct: 13 IVTGGSSGIGLAIVKELLANGANVVNA--DIHGG-----DGQH---ENYQFVPTDVSSAE 62

Query: 63 TIHSLADFVRSQFGKLDILVNNAAI 87
           ++     +  +FG++D LVNNA I
Sbjct: 63 EVNHTVAEIIEKFGRIDGLVNNAGI 87

Length = 266

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 5e-09
 Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          +VTGA+ GIG      LA  G  VV  AR+      A+++L        +  +LDV D A
Sbjct: 13 LVTGASSGIGRACAVALAQRGARVVAAARNAA----ALDRLAGETGCEPL--RLDVGDDA 66

Query: 63 TIHSLADFVRSQFGKLDILVNNAAI 87
           I        +  G  D LVN A I
Sbjct: 67 AI----RAALAAAGAFDGLVNCAGI 87

Length = 245

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 5e-09
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 2/87 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
           ++TGA++GIG  T    A  G  V L     +   EAV + ++  G +++     DVAD
Sbjct: 5  MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAV-AADVAD 63

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
           A +  L + V  + G+LD LVNNA I
Sbjct: 64 EADVLRLFEAVDRELGRLDALVNNAGI 90

Length = 248

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 52.8 bits (127), Expect = 7e-09
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTG   GIG    ++LA+ G  VV+   D +   +  E  +  G    +  Q DV   
Sbjct: 4  ALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQ--GGPRALGVQCDVTSE 61

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFGVS 91
          A + S  +    +FG LDI+V+NA I   S
Sbjct: 62 AQVQSAFEQAVLEFGGLDIVVSNAGIATSS 91

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 52.1 bits (125), Expect = 1e-08
 Identities = 39/159 (24%), Positives = 59/159 (37%), Gaps = 35/159 (22%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTGA +GIG    R L   G  V   A D    L  V  L++     +    LDVAD 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATV--IALD----LPFVLLLEYGDPLRLT--PLDVADA 52

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA- 120
           A +  +   + ++ G +D LVN A +                            T  L+ 
Sbjct: 53  AAVREVCSRLLAEHGPIDALVNCAGVL-----------------------RPGATDPLST 89

Query: 121 ---EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN 156
              E+    N  G   + + + P ++      IV V+SN
Sbjct: 90  EDWEQTFAVNVTGVFNLLQAVAPHMKDRRTGAIVTVASN 128

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TGA+ GIG+   +  A  G  +V    +++   + +   +  G ++  +   DV D 
Sbjct: 13 ALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGY-VCDVTDE 71

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            + ++   +  + G +DILVNNA I
Sbjct: 72 DGVQAMVSQIEKEVGVIDILVNNAGI 97

Length = 265

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 22/166 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG     +LA  G  VV+   D   G  A   +      ++   ++DV D 
Sbjct: 6   AIVTGAGAGIGAACAARLAREGARVVVADID---GGAAQAVVAQIAGGALAL-RVDVTDE 61

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +L +    +FG LD+LVNNA    ++                    I+     + +
Sbjct: 62  QQVAALFERAVEEFGGLDLLVNNAGAMHLT------------------PAIIDTDLAVWD 103

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           + +  N  G+   C    P +       IVN+SS  G+  +   GA
Sbjct: 104 QTMAINLRGTFLCCRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGA 149

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          AV+TG    +G    ++LA  G  V +  R++++    V ++K +G ++ +  + DV D 
Sbjct: 13 AVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEA-LAVKADVLDK 71

Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
           ++      +   FG  DIL+N A
Sbjct: 72 ESLEQARQQILEDFGPCDILINGA 95

Length = 278

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 51.5 bits (124), Expect = 2e-08
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL-KHSGFDSVIFHQLDVADP 61
          ++TGA   IG   V+ +   G IV+    D++   E +E L K      +   +LD+ D 
Sbjct: 8  LITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQ 67

Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
           ++         ++GK+D  VN A
Sbjct: 68 ESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 17/107 (15%)

Query: 2   AVVTGANK--GIGYETVRQLASNGIIVVLT---ARDEK-----RGLEAV---EKLKHSGF 48
           A+VTGA++  GIG    R+LA+ GI +  T     D+         E V   E+++  G 
Sbjct: 8   ALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYG- 66

Query: 49  DSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGD 95
                 ++D++ P   + +   V  + G   IL+NNAA    S    
Sbjct: 67  VRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAA---YSTHTR 110

Length = 256

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 51.4 bits (123), Expect = 2e-08
 Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 21/155 (13%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVE-KLKHSGFDS-VIFHQLDVAD 60
           ++TG   G+G  T  +LA  G  + L   +E+ GLEA +  L     D+ V+  + DV+D
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEE-GLEAAKAALLEIAPDAEVLLIKADVSD 65

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
            A + +  D    QFG++D   NNA I G                  K N       +  
Sbjct: 66  EAQVEAYVDATVEQFGRIDGFFNNAGIEG------------------KQNLTEDFGADEF 107

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           +K +  N  G     E ++ +++      IVN +S
Sbjct: 108 DKVVSINLRGVFYGLEKVLKVMREQGSGMIVNTAS 142

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 3e-08
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 2/92 (2%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          ++TGA++GIG  T    A+ G  V +  ARD     E  + ++ +G  + +    DVA+ 
Sbjct: 6  LITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVV-AGDVANE 64

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFGVSVD 93
          A + ++ D V+S FG+LD LVNNA I   S+ 
Sbjct: 65 ADVIAMFDAVQSAFGRLDALVNNAGIVAPSMP 96

Length = 248

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 3e-08
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL--EAVEKLKHSGFDSVIFHQLDVA 59
           VVTGA +GIG     + A+ G  VVL  R E   L  E   +L+ +G +++     D+ 
Sbjct: 11 VVVTGAAQGIGRGVALRAAAEGARVVLVDRSE---LVHEVAAELRAAGGEALALTA-DLE 66

Query: 60 DPATIHSLADFVRSQFGKLDILVNN 84
            A   +        FG++D+L+NN
Sbjct: 67 TYAGAQAAMAAAVEAFGRIDVLINN 91

Length = 260

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 51.0 bits (122), Expect = 3e-08
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           VVTGA +GIG     +LA  G  V+L  R E    E + ++  +G D+   H  D+   
Sbjct: 7  VVVTGAAQGIGRGVAERLAGEGARVLLVDRSEL-VHEVLAEILAAG-DAAHVHTADLETY 64

Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
          A    +      +FG++D+L+NN 
Sbjct: 65 AGAQGVVRAAVERFGRVDVLINNV 88

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 51.2 bits (123), Expect = 3e-08
 Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 33/190 (17%)

Query: 1   YAVVTGANKGIGYETVRQL-----ASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFH- 54
             +VTGAN G+G     +L      +  + ++L  R+ +R   A   L  S  D+ +   
Sbjct: 3   VVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFD 62

Query: 55  --QLDVADPATIHSLADFVRSQFGKLDILVNNAAIF---GVSVDGDALSGFVKDGEPIKW 109
              +D+++  ++ + A  ++ ++ +LD L  NA I    G+   G            +  
Sbjct: 63  YVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVTN 122

Query: 110 NEIVTPTYELAEKCLRTNYYGSK--RMCEV--------------LIPLLQLSDLP-RIVN 152
                PTY++  + L +    +    + EV              L PLL  SD   +I+ 
Sbjct: 123 -----PTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIW 177

Query: 153 VSSNMGKLKN 162
            SS     K 
Sbjct: 178 TSSLNASPKY 187

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 4e-08
 Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 25/162 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNG---IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDV 58
            ++TG + G+G     +LA++G   I++ +     +   +AV     +     +    DV
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDV 68

Query: 59  AD-PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTY 117
            D  AT  +L   V  +FG+LDILVNNA I        A +    +    +W++++    
Sbjct: 69  RDFAATRAALDAGVE-EFGRLDILVNNAGIA----TDAAFAELSIE----EWDDVI---- 115

Query: 118 ELAEKCLRTNYYGSKRMCEVLI-PLLQLSDLPRIVNVSSNMG 158
                    N  G   + +  + P+++     RIVN++S  G
Sbjct: 116 -------DVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAG 150

Length = 249

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 50.5 bits (121), Expect = 5e-08
 Identities = 25/84 (29%), Positives = 37/84 (44%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A V GA  G+G    R+ A+ G  V L AR E +    +  +      S      D  D 
Sbjct: 2  AAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARDE 61

Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
            + +L D +  + G L++LV NA
Sbjct: 62 DEVIALFDLIEEEIGPLEVLVYNA 85

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 5e-08
 Identities = 42/186 (22%), Positives = 71/186 (38%), Gaps = 46/186 (24%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           Y ++TG ++G+G     QL   G  V+  +R E + L  + +  +S      FH LD+ D
Sbjct: 3   YVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNL---TFHSLDLQD 59

Query: 61  PATIHS-LADFVRSQFGKLD---ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPT 116
              + +   + + S          L+NNA +                  PIK      P 
Sbjct: 60  VHELETNFNEILSSIQEDNVSSIHLINNAGMV----------------APIK------PI 97

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLL-------QLSDL---PRIVNVSSNMGKLKNTWQG 166
            +   + L TN +       +L P++          D     R++N+SS  G  KN + G
Sbjct: 98  EKAESEELITNVH-----LNLLAPMILTSTFMKHTKDWKVDKRVINISS--GAAKNPYFG 150

Query: 167 AICYLT 172
              Y +
Sbjct: 151 WSAYCS 156

Length = 251

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 50.3 bits (120), Expect = 5e-08
 Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 20/167 (11%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           +VTGA+ GIG E     A  G  V+L  R+E++  +  + +   G     +  LD+    
Sbjct: 8   LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLTCT 67

Query: 63  T--IHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           +     LA  +   + +LD +++NA + G           + +  P  W ++        
Sbjct: 68  SENCQQLAQRIAVNYPRLDGVLHNAGLLGD-------VCPLSEQNPQVWQDV-------- 112

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
               + N   +  + + L+PLL  SD   +V  SS++G+      GA
Sbjct: 113 ---XQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGA 156

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 50.2 bits (120), Expect = 7e-08
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 5/85 (5%)

Query: 4  VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
          +TG++ G+G    R L   G  VVL AR +KR     +         +I    D++  A 
Sbjct: 12 ITGSSDGLGLAAARTLLHQGHEVVLHARSQKR-AADAKAACPGAAGVLIG---DLSSLAE 67

Query: 64 IHSLADFVRSQFGKLDILVNNAAIF 88
             LAD V +  G+ D +++NA I 
Sbjct: 68 TRKLADQVNA-IGRFDAVIHNAGIL 91

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 49.9 bits (119), Expect = 7e-08
 Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 23/168 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA+ GIG E  R L + G IV L        +E +E L     + V     +++D 
Sbjct: 9   ALVTGASGGIGEEIARLLHAQGAIVGLHGTR----VEKLEALAAELGERVKIFPANLSDR 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +L     +    +DILVNNA   G++ DG     FV+  +   W+ +         
Sbjct: 65  DEVKALGQKAEADLEGVDILVNNA---GITKDGL----FVRMSDE-DWDSV--------- 107

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
             L  N   + R+   L   +      RI+N++S +G   N  Q   C
Sbjct: 108 --LEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYC 153

Length = 245

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 50.0 bits (120), Expect = 8e-08
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 2/91 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
          A+VTGA K IG      LA+ G  VV+     E       ++L     +S +  Q D++D
Sbjct: 3  ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALR-NSAVLVQADLSD 61

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAIFGVS 91
           A    L       FG+ D+LVNNA+ F  +
Sbjct: 62 FAACADLVAAAFRAFGRCDVLVNNASAFYPT 92

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 49.9 bits (119), Expect = 8e-08
 Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 19/161 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG   GIG      LA  G  VV+     +        ++ +G    I  + +V   
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAG-GQAIGLECNVTSE 60

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + ++     SQFG + ILVNNA   G       +                  T E  E
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPM------------------TEEDFE 102

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
              + N + + R+ ++  P +Q +    I+N+SS   + KN
Sbjct: 103 WAFKLNLFSAFRLSQLCAPHMQKAGGGAILNISSMSSENKN 143

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 49.5 bits (119), Expect = 9e-08
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 13/93 (13%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TGA++GIG    R+LA     ++L  R  +R  E                 +D+ DP
Sbjct: 6  ALITGASRGIGAAIARELAPTH-TLLLGGRPAERLDELAA-----ELPGATPFPVDLTDP 59

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDG 94
            I +       Q G+LD+LV+NA   GV+  G
Sbjct: 60 EAIAA----AVEQLGRLDVLVHNA---GVADLG 85

Length = 227

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 49.7 bits (119), Expect = 1e-07
 Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 22/155 (14%)

Query: 4   VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
           +TG   GIG    ++    G  V++  R+E+R L   +         +     DVAD  +
Sbjct: 10  ITGGASGIGLALAKRFLELGNTVIICGRNEER-LAEAKA----ENPEIHTEVCDVADRDS 64

Query: 64  IHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKC 123
              L ++++ ++  L++L+NNA I              +  E +   E      + AE+ 
Sbjct: 65  RRELVEWLKKEYPNLNVLINNAGI--------------QRNEDLTGAE---DLLDDAEQE 107

Query: 124 LRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           + TN     R+  +L+P L       I+NVSS + 
Sbjct: 108 IATNLLAPIRLTALLLPHLLRQPEATIINVSSGLA 142

Length = 245

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 1e-07
 Identities = 37/165 (22%), Positives = 58/165 (35%), Gaps = 20/165 (12%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           VV+G   G+G     + A  G  VVL AR  +R L+ V           +    D+ D  
Sbjct: 9   VVSGVGPGLGRTLAVRAARAGADVVLAARTAER-LDEVAAEIDDLGRRALAVPTDITDED 67

Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEK 122
              +L      +FG++D LVNNA                          +    +     
Sbjct: 68  QCANLVALALERFGRVDALVNNAFRVPS------------------MKPLADADFAHWRA 109

Query: 123 CLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
            +  N  G+ R+ +   P L  S    IV ++S + +      GA
Sbjct: 110 VIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGA 153

Length = 258

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 49.5 bits (119), Expect = 1e-07
 Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 32/161 (19%)

Query: 4   VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
           +TG + G G    +   + G  VV T R E     A    +    D  +   LDV D   
Sbjct: 9   ITGVSSGFGRALAQAALAAGHRVVGTVRSE----AARADFEALHPDRALARLLDVTDFDA 64

Query: 64  IHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKC 123
           I ++     + FG +D+LVNNA        G    G +++               LAE  
Sbjct: 65  IDAVVADAEATFGPIDVLVNNA--------GYGHEGAIEES-------------PLAE-- 101

Query: 124 LR----TNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
           +R     N +G+  M + ++P ++      IVN++S MG L
Sbjct: 102 MRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITS-MGGL 141

Length = 277

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 21/156 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIF-HQLDVA 59
           A +TGA  G+G    R++A  G  V LT  ++  GL+A   ++  +  + V F    DV 
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           D A   +L        G L +LVNNA   GV   G                 I     + 
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNA---GVGSFGA----------------IEQIELDE 102

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
             + +  N       C+  +P L+ S    IVN+SS
Sbjct: 103 WRRVMAINVESIFLGCKHALPYLRASQPASIVNISS 138

Length = 251

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 41/162 (25%), Positives = 60/162 (37%), Gaps = 29/162 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDE-----KRGLEAVEKLKHSGFDSVIFHQL 56
           A++TG + GIG       A  G  V +    E     +   + +E+        +I    
Sbjct: 29  ALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCL--LIPG-- 84

Query: 57  DVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPT 116
           D+ D +    L   V  +FGKLDILVNNAA                         I   T
Sbjct: 85  DLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQES------------------IEDIT 126

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
            E  EK  RTN +    + +  +P L+      I+N +S   
Sbjct: 127 TEQLEKTFRTNIFSMFYLTKAALPHLKKGS--SIINTTSVTA 166

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 27/166 (16%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           ++TG + GIG E   +L   G  V+   R      + V ++   GF  +    LD+ DP 
Sbjct: 6   LITGCSSGIGLEAALELKRRGYRVLAACRKP----DDVARMNSLGFTGI---LLDLDDPE 58

Query: 63  TIHSLADFV-RSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           ++   AD V      +L  L NNA  FGV                  +  + T + +  E
Sbjct: 59  SVERAADEVIALTDNRLYGLFNNAG-FGV------------------YGPLSTISRQQME 99

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           +   TN++G+ ++  +L+P +      RIV  SS MG +    +GA
Sbjct: 100 QQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGA 145

Length = 256

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 49.0 bits (117), Expect = 2e-07
 Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD- 60
          A+VTGA KGIG  TV+ LA  G  VV  +R +      V +        +    +D++D 
Sbjct: 10 ALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPG-----IEPVCVDLSDW 64

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
           AT  +L        G +D+LVNNAA+
Sbjct: 65 DATEEALG-----SVGPVDLLVNNAAV 86

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 5/86 (5%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVADP 61
          ++TGA+ GIG      LA+ G  ++L  R+ ++ LEA+  +L + G    +    D+   
Sbjct: 9  LLTGASGGIGQALAEALAAAGARLLLVGRNAEK-LEALAARLPYPGRHRWV--VADLTSE 65

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
          A   ++    R + G +++L+NNA +
Sbjct: 66 AGREAVLARAR-EMGGINVLINNAGV 90

Length = 263

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          V+TGA+ GIG  T    A  G  +VL ARDE+      E+ +  G + V+    DV D  
Sbjct: 11 VITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAE-VLVVPTDVTDAD 69

Query: 63 TIHSLADFVRSQFGKLDILVNNAAIFGV 90
           + +LA    S  G++D+ VNN  +  V
Sbjct: 70 QVKALATQAASFGGRIDVWVNNVGVGAV 97

Length = 330

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 49.1 bits (117), Expect = 2e-07
 Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 21/143 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT--ARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
           A++TGA+ GIG  T    A  G  + L     +E+   E V+ ++  G  +V     D+ 
Sbjct: 58  ALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPG-DLK 116

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           D A    L +    + G LDILVN A                  G+     +I   T E 
Sbjct: 117 DEAFCRQLVERAVKELGGLDILVNIA------------------GKQTAVKDIADITTEQ 158

Query: 120 AEKCLRTNYYGSKRMCEVLIPLL 142
            +   +TN Y    +C+  IP L
Sbjct: 159 FDATFKTNVYAMFWLCKAAIPHL 181

Length = 300

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 48.8 bits (116), Expect = 2e-07
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 20/158 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG   GIG  T R+ A  G  V +   + +   +    ++  G ++  F   D+ D 
Sbjct: 6   AIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAF-ACDITDR 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            ++ +         G +D+LVNNA         D    F K  EP  W  ++        
Sbjct: 65  DSVDTAVAAAEQALGPVDVLVNNAG-------WDKFGPFTKT-EPPLWERLIA------- 109

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
                N  G+  M   ++P +      RIVN++S+  +
Sbjct: 110 ----INLTGALHMHHAVLPGMVERGAGRIVNIASDAAR 143

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 26/160 (16%)

Query: 3   VVTGANKGIGYETVRQLASNG---IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
           ++TG + GIG     +LAS+      V  T RD K+     E        ++   QLDV 
Sbjct: 4   LITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQLDVC 63

Query: 60  DPATIHSLADFVRS-QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
           D     S+A  V       +D+LV NA +           G +   E +  + + +    
Sbjct: 64  DS---KSVAAAVERVTERHVDVLVCNAGV-----------GLLGPLEALSEDAMAS---- 105

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
                   N +G+ RM +  +P ++     RI+  SS  G
Sbjct: 106 ----VFDVNVFGTVRMLQAFLPDMKRRGSGRILVTSSVGG 141

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TG   GIG   V +  + G  V +  R  ++    +  L+    D V+  + DV   
Sbjct: 9  ALITGGGSGIGRALVERFLAEGARVAVLERSAEK----LASLRQRFGDHVLVVEGDVTSY 64

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIF 88
          A      D     FGKLD  V NA I+
Sbjct: 65 ADNQRAVDQTVDAFGKLDCFVGNAGIW 91

Length = 263

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 41/162 (25%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVA 59
            ++TGA+ G+G    + LA  G  V++  R+ K+   A ++L   G   DS     +D+ 
Sbjct: 9   VIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL---GIPPDSYTIIHIDLG 65

Query: 60  DPATIHSLADFVRSQFGK-LDILVNNAAIF-------GVSVDGDALSGFVKDGEPIKWNE 111
           D  ++    D  R   GK LD LV NAA++         S  G                 
Sbjct: 66  DLDSVRRFVDDFR-ALGKPLDALVCNAAVYMPLLKEPLRSPQG----------------- 107

Query: 112 IVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS--DLPRIV 151
                YEL    + TN+ G   +C +L+  L+ S    PR+V
Sbjct: 108 -----YEL---SMATNHLGHFLLCNLLLEDLKKSPAPDPRLV 141

Length = 322

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 3e-07
 Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 31/160 (19%)

Query: 4   VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
           +TGA+ G G     +L + G  V  T R      +A++ LK    D +   QLDV D A 
Sbjct: 7   ITGASSGFGRGMTERLLARGDRVAATVRR----PDALDDLKARYGDRLWVLQLDVTDSAA 62

Query: 64  IHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKC 123
           + ++ D   +  G++D++V+NA        G  L G                  EL++  
Sbjct: 63  VRAVVDRAFAALGRIDVVVSNA--------GYGLFG---------------AAEELSDAQ 99

Query: 124 LR----TNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
           +R    TN  GS ++    +P L+     RIV VSS  G+
Sbjct: 100 IRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ 139

Length = 276

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 48.6 bits (116), Expect = 3e-07
 Identities = 39/154 (25%), Positives = 53/154 (34%), Gaps = 46/154 (29%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           V+TGA  GIG  T   L   G  V+    D +                      D++ P 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVI--GIDLREA----------------DVIADLSTPE 44

Query: 63  TIHSL-ADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
              +  AD +    G LD LVN A + G +V G  L                        
Sbjct: 45  GRAAAIADVLARCSGVLDGLVNCAGVGGTTVAGLVLK----------------------- 81

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                NY+G + + E L+P L+    P  V VSS
Sbjct: 82  ----VNYFGLRALMEALLPRLRKGHGPAAVVVSS 111

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 32/134 (23%), Positives = 49/134 (36%), Gaps = 17/134 (12%)

Query: 9   KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLA 68
             I +   +  A  G  VVLT       + AV++L       VI   LDV     I  L 
Sbjct: 6   NSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADVIP--LDVTSDEDIDELF 63

Query: 69  DFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNY 128
           + V+   GK+D LV++ A+                 E  K    +  + E   K L  + 
Sbjct: 64  EKVKEDGGKIDFLVHSIAM---------------SPEIRKGKPYLDTSREGFLKALDISA 108

Query: 129 YGSKRMCEVLIPLL 142
           Y    + +   PL+
Sbjct: 109 YSFISLAKAAKPLM 122

Length = 239

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 48.0 bits (115), Expect = 4e-07
 Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 21/98 (21%)

Query: 1  YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK---LKHSGFDSVIFHQLD 57
          +AVVTGA  GIG     +LA  G  V+L +R +++ L+AV K    K+           D
Sbjct: 3  WAVVTGATDGIGKAYAEELAKRGFNVILISRTQEK-LDAVAKEIEEKYGV--ETKTIAAD 59

Query: 58 VADPATI-----HSLADFVRSQFGKLDI--LVNNAAIF 88
           +    I       L          LDI  LVNN  I 
Sbjct: 60 FSAGDDIYERIEKELEG--------LDIGILVNNVGIS 89

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 48.0 bits (115), Expect = 4e-07
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 3/83 (3%)

Query: 2  AVVTGA--NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
           ++TG   ++ I +   + L   G  +  T + E      VEKL     +S +    DV+
Sbjct: 4  ILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKR-VEKLAERLGESALVLPCDVS 62

Query: 60 DPATIHSLADFVRSQFGKLDILV 82
          +   I  L   V+  +GKLD LV
Sbjct: 63 NDEEIKELFAEVKKDWGKLDGLV 85

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 47.8 bits (114), Expect = 5e-07
 Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 14/97 (14%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL-KHSGFDSVIFHQLDVAD 60
           +V G ++GIG   VR+  ++G  V  T    K   +A E+L + +G  +V   Q D AD
Sbjct: 9  VLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSK---DAAERLAQETGATAV---QTDSAD 62

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDAL 97
               ++ D VR + G LDILV NA   G++V GDAL
Sbjct: 63 ---RDAVIDVVR-KSGALDILVVNA---GIAVFGDAL 92

Length = 237

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 47.2 bits (112), Expect = 7e-07
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIV-VLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
          A+VTG ++GIG  T   LA  G  V V   ++     E V  +  +G  + +  Q D++D
Sbjct: 4  ALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVL-QADISD 62

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
             + ++   +      L  LVNNA I
Sbjct: 63 ENQVVAMFTAIDQHDEPLAALVNNAGI 89

Length = 247

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 7e-07
 Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 20/155 (12%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
            A++TG + GIG       A  G  + +   DE       ++         +    DV+D
Sbjct: 48  VALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD 107

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
            A      +    + G+LDILVNNAA                         +   T E  
Sbjct: 108 EAFCKDAVEETVRELGRLDILVNNAA------------------FQYPQQSLEDITAEQL 149

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           +K  +TN Y    M +  +P L+      I+N  S
Sbjct: 150 DKTFKTNIYSYFHMTKAALPHLKQGS--AIINTGS 182

Length = 290

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 47.5 bits (113), Expect = 7e-07
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA  GIG    R+  + G  V+    D        + L  + F  V     D+ D 
Sbjct: 5  ALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVA---CDLTDA 61

Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
          A++ +      ++ G +D+LV NA
Sbjct: 62 ASLAAALANAAAERGPVDVLVANA 85

Length = 257

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 10/95 (10%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVL---------TARDEKRGLEAVEKLKHSGFDSVI 52
            +VTGA  GIG       A+ G  VV+         +A         V+++  +G ++V 
Sbjct: 9   VIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVA 68

Query: 53  FHQLDVADPATIHSLADFVRSQFGKLDILVNNAAI 87
            +  D+AD     +L D     FG LD+LVNNA I
Sbjct: 69  -NGDDIADWDGAANLVDAAVETFGGLDVLVNNAGI 102

Length = 286

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 2/88 (2%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG   GIG   VR    +G  V +    +  G    + L   G  +V F   DV   
Sbjct: 21  ALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL--GGEPNVCFFHCDVTVE 78

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFG 89
             +    DF   +FG LDI+VNNA + G
Sbjct: 79  DDVSRAVDFTVDKFGTLDIMVNNAGLTG 106

Length = 280

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 7/91 (7%)

Query: 3   VVTGANKGIGYETVRQLASN-GIIVVLTAR-----DEKRGLEAVEKLKHSGFDSVIFHQL 56
           +VTG   GIG    R LA   G  +VL  R     +E+   + +  L+  G   V++   
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALG-ARVLYISA 267

Query: 57  DVADPATIHSLADFVRSQFGKLDILVNNAAI 87
           DV D A +  L + VR ++G +D +++ A +
Sbjct: 268 DVTDAAAVRRLLEKVRERYGAIDGVIHAAGV 298

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 25/86 (29%), Positives = 32/86 (37%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A VTGA  GIG      LA  G  V L       GL    +   +     I    DV   
Sbjct: 11 AFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSK 70

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
          A + +      ++ G L + VN A I
Sbjct: 71 ADLRAAVARTEAELGALTLAVNAAGI 96

Length = 254

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 11/93 (11%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS--GFDSVIFHQLDVAD 60
           +TGA+ GIG    R+ A  G  + L AR   R  +A++           V  +  DV D
Sbjct: 6  FITGASSGIGQALAREYARQGATLGLVAR---RT-DALQAFAARLPKAARVSVYAADVRD 61

Query: 61 PATIHSLA-DFVRSQFGKLDILVNNAAIFGVSV 92
             + + A DF+ +  G  D+++ NA   G+SV
Sbjct: 62 ADALAAAAADFI-AAHGLPDVVIANA---GISV 90

Length = 257

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 46.2 bits (109), Expect = 2e-06
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
          A VTG   GIG    ++L  +G  VV     +  R ++ +E  K  GFD  I  + +V D
Sbjct: 6  AYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFD-FIASEGNVGD 64

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
            +  +  D V+++ G++D+LVNNA I
Sbjct: 65 WDSTKAAFDKVKAEVGEIDVLVNNAGI 91

Length = 246

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 15/110 (13%)

Query: 2   AVVTGAN--KGIGYETVRQLASNGIIVVLT-----------ARDEKRGLEAVEKLKHSGF 48
           AVVTG +   GIG    ++LA  G  +  T             D+   ++  E+L  +G 
Sbjct: 9   AVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGV 68

Query: 49  DSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALS 98
             V   +LD+        L + V  Q G   ILVNNAA +  + D   L+
Sbjct: 69  -KVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAA-YSTNNDFSNLT 116

Length = 256

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 10/101 (9%)

Query: 2   AVVTG--ANKGIGYETVRQLASNGIIVVLTARDEKRGLEA-VEKLKHSGFDSVIFHQLDV 58
            ++ G   N+ I +   + LA  G  +  T + E+  LE  VE+L      S +    DV
Sbjct: 9   ILIMGVANNRSIAWGIAKALAEQGAELAFTYQGER--LEKRVEELA-EELGSDLVLPCDV 65

Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSG 99
            +  +I +L   ++ ++GKLD LV++ A        + L G
Sbjct: 66  TNDESIDALFATIKKKWGKLDGLVHSIAF----APKEELKG 102

Length = 259

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.5 bits (108), Expect = 4e-06
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 3/87 (3%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
          AVVTGA  G+G      LA  G  VV+           V ++++ +G    +    D++ 
Sbjct: 15 AVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAG-AKAVAVAGDISQ 73

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
           AT   L        G LDI+VNNA I
Sbjct: 74 RATADELVATAVG-LGGLDIVVNNAGI 99

Length = 306

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 44.9 bits (107), Expect = 4e-06
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 6/83 (7%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          ++TGA + IG      L + G  V+++ R       A++ L+ +G       Q D +  A
Sbjct: 6  LITGAGQRIGLALAWHLLAQGQPVIVSYRTHY---PAIDGLRQAG---AQCIQADFSTNA 59

Query: 63 TIHSLADFVRSQFGKLDILVNNA 85
           I +  D ++     L  +++NA
Sbjct: 60 GIMAFIDELKQHTDGLRAIIHNA 82

Length = 236

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 13/97 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTAR----DEKRGLE-----AVEKLKHSGFDSVI 52
             +TGA++GIG     + A +G  +V+ A+      K  L      A E+++ +G  ++ 
Sbjct: 9   LFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPK--LPGTIHTAAEEIEAAGGQALP 66

Query: 53  FHQLDVADPATIHSLADFVRSQFGKLDILVNNA-AIF 88
               DV D   + +       +FG +DI VNNA AI 
Sbjct: 67  L-VGDVRDEDQVAAAVAKAVERFGGIDICVNNASAIN 102

Length = 273

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 44.9 bits (106), Expect = 5e-06
 Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE-AVEKLKHSGFDSVIFHQL--DV 58
          AV+TG   GIG  T  + A  G  VVL   D K GL  AV  L+  GFD    H +  DV
Sbjct: 9  AVITGGASGIGLATGTEFARRGARVVLGDVD-KPGLRQAVNHLRAEGFDV---HGVMCDV 64

Query: 59 ADPATIHSLADFVRSQFGKLDILVNNAAI 87
               +  LAD      G +D++ +NA I
Sbjct: 65 RHREEVTHLADEAFRLLGHVDVVFSNAGI 93

Length = 275

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 6e-06
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 19/101 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG-------------LEAVEKLKHSGF 48
           A+V GA +G G     +L + G  V +T R  +                E V      G 
Sbjct: 11  ALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRG- 69

Query: 49  DSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFG 89
              I  Q+D   P  + +L + +  + G+LDILVN+  I+G
Sbjct: 70  ---IAVQVDHLVPEQVRALVERIDREQGRLDILVND--IWG 105

Length = 305

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 44.5 bits (105), Expect = 6e-06
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 4/87 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TG+ +GIG    +     G  V +   + +       ++  +         LDV D 
Sbjct: 6  ALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAI----SLDVTDQ 61

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIF 88
          A+I      +  ++G +DILVNNAA+F
Sbjct: 62 ASIDRCVAALVDRWGSIDILVNNAALF 88

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 44.3 bits (105), Expect = 8e-06
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TG   G+G   V +  + G  V +  R      E V +L+    D+V+  + DV   
Sbjct: 7  ALITGGGSGLGRALVERFVAEGAKVAVLDRSA----EKVAELRADFGDAVVGVEGDVRSL 62

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
          A           +FGKLD  + NA I
Sbjct: 63 ADNERAVARCVERFGKLDCFIGNAGI 88

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 44.1 bits (105), Expect = 8e-06
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVL---TARDEKRGLEAVEKLKHSGFDSVIFHQLDV 58
          A+VTGA + IG      LA++G  V +    +RDE        +++  G  +V   Q D+
Sbjct: 12 ALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAE--ALAAEIRALGRRAVAL-QADL 68

Query: 59 ADPATIHSLADFVRSQFGKLDILVNNAAIF 88
          AD A + +L     +  G + +LVNNA++F
Sbjct: 69 ADEAEVRALVARASAALGPITLLVNNASLF 98

Length = 258

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 29/170 (17%)

Query: 3   VVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDS---VIFHQLDV 58
           ++TGA+ G+G  T + LA  G   VV+  RD    L+A    K +G       + H LD+
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDF---LKAERAAKSAGMPKDSYTVMH-LDL 56

Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
           A   ++    D  R     LD+LV NAA++                EP       T T +
Sbjct: 57  ASLDSVRQFVDNFRRSGRPLDVLVCNAAVY-----------LPTAKEP-------TFTAD 98

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLP--RIVNVSSNMGKLKNTWQG 166
             E  + TN+ G   +  +L+  L+ SD P  R++ V S  G   NT  G
Sbjct: 99  GFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN-TNTLAG 147

Length = 308

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TGA+ GIG          G  V + AR     LE +     +    V+    DV+  
Sbjct: 12  ALITGASTGIGKRVALAYVEAGAQVAIAARHLD-ALEKLADEIGTSGGKVVPVCCDVSQH 70

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVS 91
             + S+ D V ++ G +DI V NA I  V+
Sbjct: 71  QQVTSMLDQVTAELGGIDIAVCNAGIITVT 100

Length = 253

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG   GIG  T   LA  G  V++T  D++ G   VE++ + G ++ +F   D+   
Sbjct: 19  AIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEA-LFVSYDMEKQ 77

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGV 90
                +     + F ++D+L  NA ++ +
Sbjct: 78  GDWQRVISITLNAFSRIDMLFQNAGLYKI 106

Length = 169

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 43.3 bits (102), Expect = 2e-05
 Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 19/154 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VT +  GIG    R+LA +G  VV+++R ++    AV  L+  G  SV      V   
Sbjct: 13  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGL-SVTGTVCHVGKA 71

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                L     +  G +DILV+NAA+                  P  +  I+  T E+ +
Sbjct: 72  EDRERLVATAVNLHGGVDILVSNAAV-----------------NPF-FGNILDSTEEVWD 113

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           K L  N   +  M + ++P ++      +V VSS
Sbjct: 114 KILDVNVKATALMTKAVVPEMEKRGGGSVVIVSS 147

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 14/92 (15%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTG ++G+G     QL   GI V+  AR     L A      +G + +   +LD++D 
Sbjct: 4  AIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAA-----AAG-ERLAEVELDLSDA 57

Query: 62 AT----IHS--LADFVRSQFGKLDILVNNAAI 87
          A     +    LA FV        +L+NNA  
Sbjct: 58 AAAAAWLAGDLLAAFVDG--ASRVLLINNAGT 87

Length = 243

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDVAD 60
          AVV G  + +G      LA  G  V +   + ++     +++    G         D   
Sbjct: 5  AVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS 64

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
            ++ +L+  V   FG++D+LV NA I
Sbjct: 65 EQSVLALSRGVDEIFGRVDLLVYNAGI 91

Length = 259

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 7/89 (7%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          VV GA  GIG    R++ + G  V+L   +E+    A + L+ +GFD V   ++DV+   
Sbjct: 6  VVIGAG-GIGQAIARRVGA-GKKVLLADYNEENLEAAAKTLREAGFD-VSTQEVDVSSRE 62

Query: 63 TIHSLADFVRSQFGKLDILVNNAAIFGVS 91
          ++ +LA   ++  G +  LV+ A   GVS
Sbjct: 63 SVKALAATAQT-LGPVTGLVHTA---GVS 87

Length = 275

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 42.1 bits (99), Expect = 4e-05
 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           V++G  +GIG   V + A +G+ +  T   + +   +  E L+         + L++ +P
Sbjct: 12  VISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEP 71

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVK--DGEPIKWNEIVTPT 116
            T   L   +   F ++D  ++NA I G +V G    G+ K    +P   N I T T
Sbjct: 72  ETYKELFKKIDEDFDRVDFFISNAIISGRAVVG----GYTKFMRLKPKGLNNIYTAT 124

Length = 260

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 42.0 bits (99), Expect = 5e-05
 Identities = 37/170 (21%), Positives = 53/170 (31%), Gaps = 32/170 (18%)

Query: 3   VVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           ++TG   G+G    R LA+ G   +V+L+ R       A   L  +G   V   + DV D
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIF---GVSVDGDALSGFVKDGEPIKWNEIVTPTY 117
           PA        + +   +L      A +    GV  D                  +   T 
Sbjct: 214 PAA-------LAALLAELAAGGPLAGVIHAAGVLRDA----------------LLAELTP 250

Query: 118 ELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
                 L     G+  + E    L     L   V  SS    L    Q A
Sbjct: 251 AAFAAVLAAKVAGALNLHE----LTPDLPLDFFVLFSSVAALLGGAGQAA 296

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 41.8 bits (98), Expect = 6e-05
 Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           AVVTGA K IG      L   G  VVL   R          +L     +S +  Q D+++
Sbjct: 4   AVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSN 63

Query: 61  PATIHS----LADFVRSQFGKLDILVNNAAIFGVS--VDGDALSGFVKDGEPI 107
            AT+ S    + D     FG+ D+LVNNA+ F  +  + GDA  G V D + +
Sbjct: 64  SATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEG-VGDKKSL 115

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 40.5 bits (96), Expect = 9e-05
 Identities = 37/169 (21%), Positives = 61/169 (36%), Gaps = 28/169 (16%)

Query: 3   VVTGANKGIGYETVRQLASNGII-VVLTAR---DEKRGLEAVEKLKHSGFDSVIFHQLDV 58
           ++TG   G+G    R LA  G   +VL +R   D       + +L+ +G   V     DV
Sbjct: 4   LITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAG-ARVTVVACDV 62

Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
           AD   + ++   + +  G L  +++ A      V  D +              + + T E
Sbjct: 63  ADRDALAAVLAAIPAVEGPLTGVIHAAG-----VLDDGV--------------LASLTPE 103

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
                L     G+  + E+   L     L   V  SS  G L +  Q  
Sbjct: 104 RFAAVLAPKAAGAWNLHELTADL----PLDFFVLFSSIAGVLGSPGQAN 148

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLK------HSGFDSVIFHQL 56
          ++TGA+ G+G    R+ A+ G  + L AR   R  + +E+LK      + G   V    L
Sbjct: 6  LITGASSGLGAGMAREFAAKGRDLALCAR---R-TDRLEELKAELLARYPGI-KVAVAAL 60

Query: 57 DVADPATIHSLADFVRSQFGKLDILVNNAAI 87
          DV D   +  +    R + G LD ++ NA I
Sbjct: 61 DVNDHDQVFEVFAEFRDELGGLDRVIVNAGI 91

Length = 248

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 12/90 (13%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKR--GLEAVEKLKHSGFDSVIFHQLDVA 59
          A++ GA++G+G   V +L   G  V  T R  ++   L+A+          V   +LD+ 
Sbjct: 4  ALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPG--------VHIEKLDMN 55

Query: 60 DPATIHSLADFVRSQFGKLDILVNNAAIFG 89
          DPA++  L   ++ Q  + D+L  NA I G
Sbjct: 56 DPASLDQLLQRLQGQ--RFDLLFVNAGISG 83

Length = 225

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLK-HSGFDSVIFHQLDVADP 61
          +VTG   GIG      L + G  V++  R+  +   A E+++   G  +V +   DV D 
Sbjct: 11 LVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE 70

Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
            +    D   +  G+L  +V+ A
Sbjct: 71 DQVARAVDAATAWHGRLHGVVHCA 94

Length = 276

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          +VT +++GIG+   R+L   G  VV+++R+E+   +A+++LK  G   V   + D++D  
Sbjct: 4  LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG--EVYAVKADLSDKD 61

Query: 63 TIHSLADFVRSQFGKLDILVNNA 85
           + +L        G +D LV NA
Sbjct: 62 DLKNLVKEAWELLGGIDALVWNA 84

Length = 259

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 35/162 (21%)

Query: 4   VTGANKGIGYETVRQLASNGIIVVLTARDEK----------RGLEAVEKLKHSGFDSVIF 53
           +TGA++GIG     + A +G  VV+ A+  +             E +E         ++ 
Sbjct: 8   ITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALPCIV- 66

Query: 54  HQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIV 113
              D+ D   + +  +    +FG +DILVNNA+         A+S       P+K     
Sbjct: 67  ---DIRDEDQVRAAVEKAVEKFGGIDILVNNAS---------AISLTGTLDTPMK----- 109

Query: 114 TPTYELAEKC-LRTNYYGSKRMCEVLIPLLQLSDLPRIVNVS 154
              Y+L      R  Y  SK  C   +P L+ S  P I+N+S
Sbjct: 110 --RYDLMMGVNTRGTYLCSK-AC---LPYLKKSKNPHILNLS 145

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 39.9 bits (93), Expect = 2e-04
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 7/88 (7%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG--FDSVIFHQLDVA 59
          AVVTG + G+G      LA  G  +V     E    E +E++   G  F S+      + 
Sbjct: 13 AVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPT--ETIEQVTALGRRFLSLTADLRKID 70

Query: 60 DPATIHSLADFVRSQFGKLDILVNNAAI 87
              I +L +   ++FG +DILVNNA +
Sbjct: 71 G---IPALLERAVAEFGHIDILVNNAGL 95

Length = 253

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 16/87 (18%)

Query: 1  YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
            ++TGA  GIG    R   + G  V         G++  +K   SG  +  F QLD++D
Sbjct: 7  TVLITGAASGIGLAQARAFLAQGAQVY--------GVDKQDKPDLSG--NFHFLQLDLSD 56

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
                L D+V      +DIL N A I
Sbjct: 57 DLE--PLFDWV----PSVDILCNTAGI 77

Length = 235

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            VV G   GI     +  A  G  V + +R +++   AV +L+ +G    +    DV D 
Sbjct: 12  VVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGP-EGLGVSADVRDY 70

Query: 62  ATIHSLADFVRSQFGKLDILVNNAA-IFGVSVDGDALSGF 100
           A + +    +  +FG +D+LV+ AA  F     G + +GF
Sbjct: 71  AAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGF 110

Length = 264

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 39.5 bits (92), Expect = 4e-04
 Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 22/163 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGII-VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
            ++TGA+ G+G    + LA+ G   V++  RD  +  +A + L        I H LD+  
Sbjct: 6   VIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMH-LDLGS 64

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             ++       R     LD LV NAA++  +             EP    +     +EL+
Sbjct: 65  LDSVRQFVQQFRESGRPLDALVCNAAVYFPTAK-----------EPRFTAD----GFELS 109

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDL--PRIVNVSSNMGKLK 161
              + TN+ G   +C +L+  L+ S     R++ V S  G   
Sbjct: 110 ---VGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTN 149

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 38.3 bits (90), Expect = 5e-04
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 3  VVTGANKGIGYETVRQLASNGII-VVLTARDEK---RGLEAVEKLKHSGFDSVIFHQLDV 58
          +VTG   G+G E  R LA  G   +VL +R           + +L+  G   V     DV
Sbjct: 4  LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGA-EVTVVACDV 62

Query: 59 ADPATIHSLADFVRSQFGKLDILVNNAAIF 88
          +D   + +L   +R+    L  +++ A + 
Sbjct: 63 SDRDAVRALLAEIRADGPPLRGVIHAAGVL 92

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 6e-04
 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 13/86 (15%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +VTGA KGIG     +LA+ G  V+  AR                F   +F   D+AD 
Sbjct: 6  VLVTGATKGIGLALSLRLANLGHQVIGIARSAI-----------DDFPGELF-ACDLADI 53

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
              +    +      +D +VNN  I
Sbjct: 54 EQTAATLAQINEIHP-VDAIVNNVGI 78

Length = 234

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 6e-04
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVL----TARDEKRGLEAVEKLKHSGFDSVIFHQLD 57
           ++ G  K +G    R LA+ G   V     +A  +    E V  +K +G  +V F Q D
Sbjct: 11 VLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAF-QAD 69

Query: 58 VADPATIHSLADFVRSQFGKLDILVN 83
          +   A +  L D  ++ FG+ DI +N
Sbjct: 70 LTTAAAVEKLFDDAKAAFGRPDIAIN 95

Length = 257

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 38.8 bits (90), Expect = 7e-04
 Identities = 26/126 (20%), Positives = 42/126 (33%), Gaps = 23/126 (18%)

Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           +VTG    IG   V +L + G  V    R        +  ++        F  LD+ D  
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVE--------FVVLDLTDRD 55

Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEI-VTPTYELAE 121
            +  LA  V       D +++ AA   V              +P ++ ++ V  T  L E
Sbjct: 56  LVDELAKGVP------DAVIHLAAQSSVPDS--------NASDPAEFLDVNVDGTLNLLE 101

Query: 122 KCLRTN 127
                 
Sbjct: 102 AARAAG 107

Length = 314

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 38.5 bits (89), Expect = 7e-04
 Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 31/176 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGA++GIG     +LA++G +V +   R+++   E + +++ +G  + +  + D+  
Sbjct: 9   ALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLI-EADLNS 67

Query: 61  PATIHSLADFVRSQF------GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT 114
              +  L + ++++        ++DILVNNA   G+   G                 I  
Sbjct: 68  IDGVKKLVEQLKNELQIRVGTSEIDILVNNA---GIGTQG----------------TIEN 108

Query: 115 PTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
            T E+ ++ +  N      + +  +PLL+     R++N+SS   +L  T  G+I Y
Sbjct: 109 TTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEG--RVINISSAEVRLGFT--GSIAY 160

Length = 254

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 13/89 (14%)

Query: 2  AVVTGA--NKGIGYETVRQLASNGIIVVLT------ARDEKRGLEAVEKLKHSGFDSVIF 53
          A+VTG   N+ I +   +QL + G  + +T       R EK+  E  E L  S     +F
Sbjct: 9  ALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPS-----LF 63

Query: 54 HQLDVADPATIHSLADFVRSQFGKLDILV 82
             DV D A I    + ++ ++GKLDILV
Sbjct: 64 LPCDVQDDAQIEETFETIKQKWGKLDILV 92

Length = 258

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 32/106 (30%)

Query: 53  FHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEI 112
           F Q D+ DPA+I +    V +  G++D L N   I GV                      
Sbjct: 27  FIQADLGDPASIDAA---VAALPGRIDALFN---IAGVPGTAPVEL-------------- 66

Query: 113 VTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
                       R N+ G + + E L+P  +++    IVNV+S  G
Sbjct: 67  ----------VARVNFLGLRHLTEALLP--RMAPGGAIVNVASLAG 100

Length = 241

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 1  YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK-LKHSGFDSVIFHQLDVA 59
            ++ GA   I     R+ A+ G  + L ARD +R LE +   L+  G  +V  H+LD+ 
Sbjct: 3  KILIIGATSDIARACARRYAAAGARLYLAARDVER-LERLADDLRARGAVAVSTHELDIL 61

Query: 60 DPATIHSLADFVRSQFGKLDILV 82
          D A   S A F+ S     DI++
Sbjct: 62 DTA---SHAAFLDSLPALPDIVL 81

Length = 243

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 2/80 (2%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           + G ++G+GY         G  V + +R+E +     + L   G  ++ +   DV+   
Sbjct: 9  AIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG--NIHYVVGDVSSTE 66

Query: 63 TIHSLADFVRSQFGKLDILV 82
          +  ++ +        +D LV
Sbjct: 67 SARNVIEKAAKVLNAIDGLV 86

Length = 238

>gnl|CDD|236342 PRK08862, PRK08862, short chain dehydrogenase; Provisional

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)

Query: 4  VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
          +T A   +G       A  G  ++L  +D+   L+   +   +  D+V   QL      +
Sbjct: 10 ITSAGSVLGRTISCHFARLGATLILCDQDQS-ALKDTYEQCSALTDNVYSFQLKDFSQES 68

Query: 64 IHSLADFVRSQFGK-LDILVNN 84
          I  L D +  QF +  D+LVNN
Sbjct: 69 IRHLFDAIEQQFNRAPDVLVNN 90

Length = 227

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 9/89 (10%)

Query: 2  AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQL--DV 58
          A++TG N G+G      LA  G  IV +   +       VE L         FH +  D+
Sbjct: 11 AIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRK------FHFITADL 64

Query: 59 ADPATIHSLADFVRSQFGKLDILVNNAAI 87
               I S+        G +DIL+NNA I
Sbjct: 65 IQQKDIDSIVSQAVEVMGHIDILINNAGI 93

Length = 251

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 36.8 bits (85), Expect = 0.002
 Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV 40
          +VTGA++G+G +  +  A+ G  V+L AR +K+ LE V
Sbjct: 10 LVTGASQGLGEQVAKAYAAAGATVILVARHQKK-LEKV 46

Length = 239

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 36.8 bits (86), Expect = 0.003
 Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 27/83 (32%)

Query: 4  VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
          VTGAN  +G E  R LA  G+ VV   R                       +LD+ DP  
Sbjct: 3  VTGANGQLGRELTRLLAERGVEVVALDRP----------------------ELDLTDPEA 40

Query: 64 IHSLADFVRSQFGKLDILVNNAA 86
          + +L    R      D++VN AA
Sbjct: 41 VAALVREARP-----DVVVNAAA 58

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 36.8 bits (85), Expect = 0.003
 Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 15/101 (14%)

Query: 1  YAVVTGANKGIGYETVRQLA----SNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQL 56
            +VTGA++G G    ++LA    S G ++VL+AR+++   +   ++        +    
Sbjct: 2  VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRV--VR 59

Query: 57 DVADPATIHSLADFVRS--------QFGKLDILVNNAAIFG 89
             D      L   +++           +L +L+NNA   G
Sbjct: 60 VSLDLGAEAGLEQLLKALRELPRPKGLQRL-LLINNAGTLG 99

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 36.3 bits (84), Expect = 0.004
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 12/85 (14%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVI-FHQLDVAD 60
          A++T A +GIG       A  G  V+ T  +E       EKLK       I    LDV D
Sbjct: 5  ALITAAAQGIGRAIALAFAREGANVIATDINE-------EKLKELERGPGITTRVLDVTD 57

Query: 61 PATIHSLADFVRSQFGKLDILVNNA 85
             + +LA     + G++D+L N A
Sbjct: 58 KEQVAALA----KEEGRIDVLFNCA 78

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	174
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08339	263	short chain dehydrogenase; Provisional	99.97
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.97
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.97
PRK06139	330	short chain dehydrogenase; Provisional	99.97
PRK07062	265	short chain dehydrogenase; Provisional	99.97
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK05876	275	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK07478	254	short chain dehydrogenase; Provisional	99.97
PRK07063	260	short chain dehydrogenase; Provisional	99.97
PRK07791	286	short chain dehydrogenase; Provisional	99.97
PRK08589	272	short chain dehydrogenase; Validated	99.97
PRK05599	246	hypothetical protein; Provisional	99.97
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.97
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK07109	334	short chain dehydrogenase; Provisional	99.96
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
KOG0725	270	consensus Reductases with broad range of substrate	99.96
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.96
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.96
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PLN02253	280	xanthoxin dehydrogenase	99.96
PRK05872	296	short chain dehydrogenase; Provisional	99.96
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK07024	257	short chain dehydrogenase; Provisional	99.96
PRK05867	253	short chain dehydrogenase; Provisional	99.96
PRK07825	273	short chain dehydrogenase; Provisional	99.96
PRK08862	227	short chain dehydrogenase; Provisional	99.96
PRK08303	305	short chain dehydrogenase; Provisional	99.96
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.96
PRK07677	252	short chain dehydrogenase; Provisional	99.96
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.96
PRK06194	287	hypothetical protein; Provisional	99.96
PLN02780	320	ketoreductase/ oxidoreductase	99.96
PRK08265	261	short chain dehydrogenase; Provisional	99.96
PRK06398	258	aldose dehydrogenase; Validated	99.96
PRK05854	313	short chain dehydrogenase; Provisional	99.96
PRK06114	254	short chain dehydrogenase; Provisional	99.96
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.96
KOG1208	314	consensus Dehydrogenases with different specificit	99.96
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.96
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.96
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.96
PRK07035	252	short chain dehydrogenase; Provisional	99.96
PRK08643	256	acetoin reductase; Validated	99.96
PRK06172	253	short chain dehydrogenase; Provisional	99.96
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.95
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.95
PRK09242	257	tropinone reductase; Provisional	99.95
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.95
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.95
PRK05650	270	short chain dehydrogenase; Provisional	99.95
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.95
PRK07832	272	short chain dehydrogenase; Provisional	99.95
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.95
PRK05855	582	short chain dehydrogenase; Validated	99.95
PLN00015	308	protochlorophyllide reductase	99.95
PRK06180	277	short chain dehydrogenase; Provisional	99.95
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.95
PRK07904	253	short chain dehydrogenase; Provisional	99.95
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.95
PRK12747	252	short chain dehydrogenase; Provisional	99.95
PRK06483	236	dihydromonapterin reductase; Provisional	99.95
PRK05717	255	oxidoreductase; Validated	99.95
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.95
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.95
PRK08278	273	short chain dehydrogenase; Provisional	99.95
PRK06182	273	short chain dehydrogenase; Validated	99.95
PRK05993	277	short chain dehydrogenase; Provisional	99.95
PRK07831	262	short chain dehydrogenase; Provisional	99.95
PRK07890	258	short chain dehydrogenase; Provisional	99.95
PRK07814	263	short chain dehydrogenase; Provisional	99.95
PRK06128	300	oxidoreductase; Provisional	99.95
PRK07985	294	oxidoreductase; Provisional	99.95
PRK06484	520	short chain dehydrogenase; Validated	99.95
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.95
PRK05866	293	short chain dehydrogenase; Provisional	99.95
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.95
PRK06484	520	short chain dehydrogenase; Validated	99.95
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.95
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.95
PRK08267	260	short chain dehydrogenase; Provisional	99.95
PRK07576	264	short chain dehydrogenase; Provisional	99.95
PRK06179	270	short chain dehydrogenase; Provisional	99.95
PRK06138	252	short chain dehydrogenase; Provisional	99.95
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.95
PRK08251	248	short chain dehydrogenase; Provisional	99.95
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK08263	275	short chain dehydrogenase; Provisional	99.95
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.95
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.95
PRK07454	241	short chain dehydrogenase; Provisional	99.95
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK12743	256	oxidoreductase; Provisional	99.95
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.95
PRK07069	251	short chain dehydrogenase; Validated	99.95
PRK09186	256	flagellin modification protein A; Provisional	99.95
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.95
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.95
PRK06197	306	short chain dehydrogenase; Provisional	99.95
PRK06125	259	short chain dehydrogenase; Provisional	99.95
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.95
PRK07856	252	short chain dehydrogenase; Provisional	99.95
PRK06482	276	short chain dehydrogenase; Provisional	99.94
PRK07067	257	sorbitol dehydrogenase; Provisional	99.94
PRK10538	248	malonic semialdehyde reductase; Provisional	99.94
PRK08703	239	short chain dehydrogenase; Provisional	99.94
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.94
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.94
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.94
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK06523	260	short chain dehydrogenase; Provisional	99.94
PRK08226	263	short chain dehydrogenase; Provisional	99.94
PRK12939	250	short chain dehydrogenase; Provisional	99.94
PRK06914	280	short chain dehydrogenase; Provisional	99.94
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.94
PRK05693	274	short chain dehydrogenase; Provisional	99.94
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.94
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK09072	263	short chain dehydrogenase; Provisional	99.94
PRK06196	315	oxidoreductase; Provisional	99.94
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.94
PRK06841	255	short chain dehydrogenase; Provisional	99.94
PRK08628	258	short chain dehydrogenase; Provisional	99.94
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.94
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.94
PRK07775	274	short chain dehydrogenase; Provisional	99.94
PRK09134	258	short chain dehydrogenase; Provisional	99.94
PRK06057	255	short chain dehydrogenase; Provisional	99.94
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.94
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.94
PRK06701	290	short chain dehydrogenase; Provisional	99.94
PRK07102	243	short chain dehydrogenase; Provisional	99.94
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.94
PRK06500	249	short chain dehydrogenase; Provisional	99.94
PRK06123	248	short chain dehydrogenase; Provisional	99.94
PRK05875	276	short chain dehydrogenase; Provisional	99.94
PRK07774	250	short chain dehydrogenase; Provisional	99.94
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.94
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.93
PRK12937	245	short chain dehydrogenase; Provisional	99.93
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK06181	263	short chain dehydrogenase; Provisional	99.93
PRK07201	657	short chain dehydrogenase; Provisional	99.93
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK06949	258	short chain dehydrogenase; Provisional	99.93
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.93
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.93
PRK06940	275	short chain dehydrogenase; Provisional	99.93
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.93
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.93
PRK06198	260	short chain dehydrogenase; Provisional	99.93
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.93
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.93
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.93
PRK05884	223	short chain dehydrogenase; Provisional	99.93
PRK07326	237	short chain dehydrogenase; Provisional	99.93
PRK07023	243	short chain dehydrogenase; Provisional	99.93
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK12746	254	short chain dehydrogenase; Provisional	99.93
PRK12744	257	short chain dehydrogenase; Provisional	99.93
PRK12827	249	short chain dehydrogenase; Provisional	99.92
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.92
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
COG1028	251	FabG Dehydrogenases with different specificities (	99.92
PRK09291	257	short chain dehydrogenase; Provisional	99.92
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK09135	249	pteridine reductase; Provisional	99.92
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.92
PRK12828	239	short chain dehydrogenase; Provisional	99.92
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK08324	681	short chain dehydrogenase; Validated	99.92
PRK06101	240	short chain dehydrogenase; Provisional	99.92
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK06924	251	short chain dehydrogenase; Provisional	99.92
PRK12829	264	short chain dehydrogenase; Provisional	99.92
PRK07074	257	short chain dehydrogenase; Provisional	99.91
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.91
PRK12742	237	oxidoreductase; Provisional	99.9
PRK07578	199	short chain dehydrogenase; Provisional	99.9
PRK08017	256	oxidoreductase; Provisional	99.9
PRK07041	230	short chain dehydrogenase; Provisional	99.9
PRK07577	234	short chain dehydrogenase; Provisional	99.9
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.9
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.9
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.9
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.9
PRK08264	238	short chain dehydrogenase; Validated	99.89
PRK08177	225	short chain dehydrogenase; Provisional	99.89
PRK06953	222	short chain dehydrogenase; Provisional	99.89
PRK12367	245	short chain dehydrogenase; Provisional	99.89
PRK07060	245	short chain dehydrogenase; Provisional	99.89
PRK07806	248	short chain dehydrogenase; Provisional	99.89
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.88
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.88
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK06720	169	hypothetical protein; Provisional	99.87
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.86
PRK08219	227	short chain dehydrogenase; Provisional	99.86
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.83
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.77
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.76
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.75
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.74
PLN03209	576	translocon at the inner envelope of chloroplast su	99.72
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.71
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.7
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.69
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.69
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.69
PLN02653	340	GDP-mannose 4,6-dehydratase	99.68
PLN02214	342	cinnamoyl-CoA reductase	99.68
PLN00198	338	anthocyanidin reductase; Provisional	99.68
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.68
PLN02572	442	UDP-sulfoquinovose synthase	99.67
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.67
PLN02240	352	UDP-glucose 4-epimerase	99.67
PLN02583	297	cinnamoyl-CoA reductase	99.66
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.65
PLN02650	351	dihydroflavonol-4-reductase	99.65
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.64
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.63
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.61
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.61
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.61
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.6
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.6
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.6
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.59
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.59
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.54
PLN02427	386	UDP-apiose/xylose synthase	99.52
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.51
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.51
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.5
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.5
CHL00194	317	ycf39 Ycf39; Provisional	99.48
PLN02686	367	cinnamoyl-CoA reductase	99.44
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.43
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.43
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.42
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.42
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.42
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.41
PLN02260	668	probable rhamnose biosynthetic enzyme	99.4
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.4
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.39
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.39
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.37
PRK05865	854	hypothetical protein; Provisional	99.37
PRK07201	657	short chain dehydrogenase; Provisional	99.36
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.34
PRK08309	177	short chain dehydrogenase; Provisional	99.32
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.32
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.3
PLN02206	442	UDP-glucuronate decarboxylase	99.29
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.28
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.24
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.2
PRK12320	699	hypothetical protein; Provisional	99.2
PLN02778	298	3,5-epimerase/4-reductase	99.19
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.18
PLN02996	491	fatty acyl-CoA reductase	99.11
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.1
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.09
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.07
PLN02503	605	fatty acyl-CoA reductase 2	99.04
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.03
PLN02260	668	probable rhamnose biosynthetic enzyme	98.91
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	98.82
PLN00016	378	RNA-binding protein; Provisional	98.81
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.8
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.79
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.78
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.77
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.72
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.71
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.65
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.63
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.53
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.53
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.52
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.49
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.46
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.39
COG2910	211	Putative NADH-flavin reductase [General function p	98.3
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.29
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.28
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.26
PTZ00325	321	malate dehydrogenase; Provisional	98.21
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.18
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.17
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.16
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.08
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.06
PLN00106	323	malate dehydrogenase	98.05
PRK09620	229	hypothetical protein; Provisional	97.91
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.84
PRK14982	340	acyl-ACP reductase; Provisional	97.83
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	97.8
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.72
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.71
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.7
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.67
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.67
PRK05086	312	malate dehydrogenase; Provisional	97.64
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.63
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.63
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.6
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.58
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.54
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.54
COG3268	382	Uncharacterized conserved protein [Function unknow	97.49
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.47
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.47
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.42
PRK06849	389	hypothetical protein; Provisional	97.38
KOG2774	366	consensus NAD dependent epimerase [General functio	97.36
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.31
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.28
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.24
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.22
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.22
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.21
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.19
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.18
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.18
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.13
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	97.09
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.07
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.07
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.06
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.03
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.03
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.01
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.01
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.0
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.99
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.98
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.98
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.95
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.95
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.95
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.93
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.93
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.86
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.85
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.84
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.81
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.81
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.81
PRK08223	287	hypothetical protein; Validated	96.79
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.77
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.77
PRK09496	453	trkA potassium transporter peripheral membrane com	96.75
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.74
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.72
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.72
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.69
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.69
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.66
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.63
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.58
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.55
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.55
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.55
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.54
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.54
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.53
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.53
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.52
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.46
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.46
PRK05442	326	malate dehydrogenase; Provisional	96.46
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	96.45
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.45
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.44
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.42
PRK08655	437	prephenate dehydrogenase; Provisional	96.42
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.38
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.37
PRK08328	231	hypothetical protein; Provisional	96.36
PRK04148	134	hypothetical protein; Provisional	96.36
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.35
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.35
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.35
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.32
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	96.31
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.28
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.27
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.24
PRK14968	188	putative methyltransferase; Provisional	96.24
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.22
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.19
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.18
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.16
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.14
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.13
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	96.12
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.09
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	96.08
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.07
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.06
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.0
PRK07411	390	hypothetical protein; Validated	95.97
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.97
PLN00203	519	glutamyl-tRNA reductase	95.97
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.94
PRK14851	679	hypothetical protein; Provisional	95.92
PTZ00117	319	malate dehydrogenase; Provisional	95.91
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.91
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	95.88
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	95.84
PRK10669	558	putative cation:proton antiport protein; Provision	95.78
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.78
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.75
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	95.75
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.75
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.73
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.73
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.71
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.67
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.63
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.59
PLN02602	350	lactate dehydrogenase	95.57
PRK07877	722	hypothetical protein; Provisional	95.57
PRK09496	453	trkA potassium transporter peripheral membrane com	95.55
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.52
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.5
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.5
PTZ00354	334	alcohol dehydrogenase; Provisional	95.48
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.48
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.48
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.45
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.45
PRK14852	989	hypothetical protein; Provisional	95.44
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.41
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.41
PLN02494	477	adenosylhomocysteinase	95.4
PRK06223	307	malate dehydrogenase; Reviewed	95.38
PRK13255	218	thiopurine S-methyltransferase; Reviewed	95.36
PRK11207	197	tellurite resistance protein TehB; Provisional	95.33
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.33
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.33
PLN02740	381	Alcohol dehydrogenase-like	95.31
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.3
COG5322	351	Predicted dehydrogenase [General function predicti	95.3
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.29
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.29
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.27
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.25
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.24
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.23
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.22
PRK03562	621	glutathione-regulated potassium-efflux system prot	95.22
PRK03659	601	glutathione-regulated potassium-efflux system prot	95.21
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.21
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.19
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	95.17
KOG4288	283	consensus Predicted oxidoreductase [General functi	95.15
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.13
TIGR03736	244	PRTRC_ThiF PRTRC system ThiF family protein. A nov	95.12
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.11
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	95.1
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.07
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.01
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	94.97
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	94.97
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	94.94
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	94.88
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	94.87
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	94.87
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	94.87
PTZ00082	321	L-lactate dehydrogenase; Provisional	94.79
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	94.79
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	94.75
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.73
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	94.72
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	94.69
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.67
PRK13771	334	putative alcohol dehydrogenase; Provisional	94.66
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	94.64
PLN02827	378	Alcohol dehydrogenase-like	94.62
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.6
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	94.59

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=1.7e-38  Score=228.57  Aligned_cols=152  Identities=27%  Similarity=0.337  Sum_probs=141.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|||||+|||.++|++|++.|++|++++|+.+.+++++.++.+   ..+..+..||+|.++++++++.+.++|++||+
T Consensus         8 v~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           8 VALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---GAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            489999999999999999999999999999999988888888865   35899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||....                   .++.+.+.++|++|+++|+.|.++.+++++|.|.+++.|.||++||++|..
T Consensus        85 LvNNAGl~~g-------------------~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~  145 (246)
T COG4221          85 LVNNAGLALG-------------------DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY  145 (246)
T ss_pred             EEecCCCCcC-------------------ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc
Confidence            9999998643                   235567889999999999999999999999999999999999999999999


Q ss_pred             cCCCCcceeeeccC
Q 035504          161 KNTWQGAICYLTFL  174 (174)
Q Consensus       161 ~~~~~~~y~~~k~~  174 (174)
                      +.|+...||++|+|
T Consensus       146 ~y~~~~vY~ATK~a  159 (246)
T COG4221         146 PYPGGAVYGATKAA  159 (246)
T ss_pred             cCCCCccchhhHHH
Confidence            99999999999986

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-37  Score=231.43  Aligned_cols=154  Identities=29%  Similarity=0.414  Sum_probs=141.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCc-eeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS-VIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|||||+|||.++|++|+++|++++++.|...+.++..+++.+.++.. +.++++|++|+++++++++++.++||++|
T Consensus        14 vVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vD   93 (282)
T KOG1205|consen   14 VVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVD   93 (282)
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCC
Confidence            58999999999999999999999999999999888888888888876665 99999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+...                   ....+.+.++++..|++|++|+++++|+++|.|++++.|+||++||++|.
T Consensus        94 vLVNNAG~~~~-------------------~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~  154 (282)
T KOG1205|consen   94 VLVNNAGISLV-------------------GFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK  154 (282)
T ss_pred             EEEecCccccc-------------------cccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence            99999999652                   12345677888999999999999999999999999989999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|....|++|||
T Consensus       155 ~~~P~~~~Y~ASK~  168 (282)
T KOG1205|consen  155 MPLPFRSIYSASKH  168 (282)
T ss_pred             cCCCcccccchHHH
Confidence            99999999999996

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=3e-36  Score=222.13  Aligned_cols=155  Identities=25%  Similarity=0.354  Sum_probs=145.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||||||+|||.++|++|+++|++|++++|+.+.+++++++++...+..+.++.+|+++.+++.++.+++.+..+.||+
T Consensus         8 ~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Idv   87 (265)
T COG0300           8 TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDV   87 (265)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccE
Confidence            58999999999999999999999999999999999999999999887667999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+....                   ++.+.+.++.++++++|+.+...|+++++|.|.+++.|.||+|+|..|..
T Consensus        88 LVNNAG~g~~g-------------------~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~  148 (265)
T COG0300          88 LVNNAGFGTFG-------------------PFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI  148 (265)
T ss_pred             EEECCCcCCcc-------------------chhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcC
Confidence            99999996543                   35666788889999999999999999999999999999999999999999


Q ss_pred             cCCCCcceeeeccC
Q 035504          161 KNTWQGAICYLTFL  174 (174)
Q Consensus       161 ~~~~~~~y~~~k~~  174 (174)
                      +.|....|+++|+|
T Consensus       149 p~p~~avY~ATKa~  162 (265)
T COG0300         149 PTPYMAVYSATKAF  162 (265)
T ss_pred             CCcchHHHHHHHHH
Confidence            99999999999986

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.7e-34  Score=210.20  Aligned_cols=152  Identities=24%  Similarity=0.328  Sum_probs=142.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|+|+++|.+|+++|+++++.+.+.+...+..++++..+  ++..+.||+++.+++.+..+++++..|.+|+
T Consensus        40 ~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g--~~~~y~cdis~~eei~~~a~~Vk~e~G~V~I  117 (300)
T KOG1201|consen   40 IVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG--EAKAYTCDISDREEIYRLAKKVKKEVGDVDI  117 (300)
T ss_pred             EEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC--ceeEEEecCCCHHHHHHHHHHHHHhcCCceE
Confidence            58999999999999999999999999999999998899999888774  6999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+.+..                   +..+.+.++++++|++|+.|.+..+|+++|.|.+...|+||.++|++|..
T Consensus       118 LVNNAGI~~~~-------------------~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~  178 (300)
T KOG1201|consen  118 LVNNAGIVTGK-------------------KLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLF  178 (300)
T ss_pred             EEeccccccCC-------------------CccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhccc
Confidence            99999997643                   35667888999999999999999999999999998899999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...||+||+
T Consensus       179 g~~gl~~YcaSK~  191 (300)
T KOG1201|consen  179 GPAGLADYCASKF  191 (300)
T ss_pred             CCccchhhhhhHH
Confidence            9999999999996

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.1e-31  Score=197.67  Aligned_cols=153  Identities=21%  Similarity=0.223  Sum_probs=134.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.++.++..+++....+.++.++.+|++|+++++++++++. ++|++|+
T Consensus        10 ~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~iD~   88 (263)
T PRK08339         10 LAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NIGEPDI   88 (263)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hhCCCcE
Confidence            479999999999999999999999999999998877777777765544568899999999999999999986 6899999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|...+                   ..+.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        89 lv~nag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~  149 (263)
T PRK08339         89 FFFSTGGPKP-------------------GYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE  149 (263)
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC
Confidence            9999997432                   123456788999999999999999999999999888889999999999998


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       150 ~~~~~~~y~asKa  162 (263)
T PRK08339        150 PIPNIALSNVVRI  162 (263)
T ss_pred             CCCcchhhHHHHH
Confidence            8898899998885

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.97  E-value=9.7e-31  Score=181.63  Aligned_cols=152  Identities=22%  Similarity=0.219  Sum_probs=133.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++..|+++|++|++.+++...+++.+..|...+  ....+.||++++++++.++++..+.+|++++
T Consensus        16 ~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~--~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   16 VAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG--DHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             eeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC--ccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            47899999999999999999999999999999887777777776532  4678999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhh--ccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPL--LQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--m~~~~~g~iv~isS~~~  158 (174)
                      +|||||+....                   -+..+++++|++++.+|+.|.|+++|++.+.  +.++++.+||++||+.|
T Consensus        94 lVncAGItrD~-------------------~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVG  154 (256)
T KOG1200|consen   94 LVNCAGITRDG-------------------LLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVG  154 (256)
T ss_pred             EEEcCcccccc-------------------ceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhc
Confidence            99999996432                   1345678888888999999999999999998  44455569999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      .+++-++..|+++|.
T Consensus       155 kiGN~GQtnYAAsK~  169 (256)
T KOG1200|consen  155 KIGNFGQTNYAASKG  169 (256)
T ss_pred             ccccccchhhhhhcC
Confidence            999999999999984

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=1e-30  Score=182.90  Aligned_cols=151  Identities=25%  Similarity=0.339  Sum_probs=133.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      |+|||||++|||+++|++|.+.|-+|++++|+...+++.+++..     .+....||+.|.++++++++++++.++.+++
T Consensus         7 TiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p-----~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967           7 TILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP-----EIHTEVCDVADRDSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             EEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc-----chheeeecccchhhHHHHHHHHHhhCCchhe
Confidence            68999999999999999999999999999999887777766542     3777899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+....                ++. -.+...++..+-+.+|+.+|++|++.++|++.+++.+.||++||..+..
T Consensus        82 liNNAGIqr~~----------------dlt-~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv  144 (245)
T COG3967          82 LINNAGIQRNE----------------DLT-GAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV  144 (245)
T ss_pred             eeecccccchh----------------hcc-CCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC
Confidence            99999996542                222 2344566677779999999999999999999999889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      |....+.||++|.
T Consensus       145 Pm~~~PvYcaTKA  157 (245)
T COG3967         145 PMASTPVYCATKA  157 (245)
T ss_pred             cccccccchhhHH
Confidence            9999999999984

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.9e-30  Score=199.06  Aligned_cols=153  Identities=28%  Similarity=0.371  Sum_probs=137.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+ .++.++.+|++|.++++++++++.+.+|++|+
T Consensus         9 ~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   87 (330)
T PRK06139          9 VVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALG-AEVLVVPTDVTDADQVKALATQAASFGGRIDV   87 (330)
T ss_pred             EEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            58999999999999999999999999999999888878777777654 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   .+.+.+.+++++.+++|+.+++++++.++|+|++++.|+||++||..+..
T Consensus        88 lVnnAG~~~~~-------------------~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~  148 (330)
T PRK06139         88 WVNNVGVGAVG-------------------RFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA  148 (330)
T ss_pred             EEECCCcCCCC-------------------CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC
Confidence            99999985321                   23456788899999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|++..|+.+|+
T Consensus       149 ~~p~~~~Y~asKa  161 (330)
T PRK06139        149 AQPYAAAYSASKF  161 (330)
T ss_pred             CCCCchhHHHHHH
Confidence            9999999999996

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8e-30  Score=191.09  Aligned_cols=154  Identities=30%  Similarity=0.348  Sum_probs=135.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||++++++|+++|++|++++|+.+..++..+++.+.++ .++..+.+|++|+++++++++++.+.++++|
T Consensus        10 ~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   89 (265)
T PRK07062         10 VAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVD   89 (265)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            489999999999999999999999999999998777777777766543 3688899999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||....                   .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+.
T Consensus        90 ~li~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  150 (265)
T PRK07062         90 MLVNNAGQGRV-------------------STFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLAL  150 (265)
T ss_pred             EEEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEecccccc
Confidence            99999997432                   12345577888999999999999999999999998878999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       151 ~~~~~~~~y~asKa  164 (265)
T PRK07062        151 QPEPHMVATSAARA  164 (265)
T ss_pred             CCCCCchHhHHHHH
Confidence            98888899998885

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=9.5e-30  Score=191.83  Aligned_cols=154  Identities=19%  Similarity=0.242  Sum_probs=126.8

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+  +|||+++|++|+++|++|++++|+.+ ..+..+++.+..+.. ..+++|++|+++++++++++.+++|++
T Consensus         7 ~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~i   84 (274)
T PRK08415          7 KGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGKI   84 (274)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            58999997  89999999999999999999998853 233344443332233 578999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||+..+..               ...++.+.+.++|+++|++|+.+++++++.++|.|+++  |+||++||..+
T Consensus        85 DilVnnAG~~~~~~---------------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~  147 (274)
T PRK08415         85 DFIVHSVAFAPKEA---------------LEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--ASVLTLSYLGG  147 (274)
T ss_pred             CEEEECCccCcccc---------------cccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcEEEEecCCC
Confidence            99999999743210               01234566888999999999999999999999999753  89999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|....|+.+|+
T Consensus       148 ~~~~~~~~~Y~asKa  162 (274)
T PRK08415        148 VKYVPHYNVMGVAKA  162 (274)
T ss_pred             ccCCCcchhhhhHHH
Confidence            988888899999986

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.4e-30  Score=192.52  Aligned_cols=153  Identities=28%  Similarity=0.284  Sum_probs=135.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+...+..+++...+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus         8 ~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   86 (275)
T PRK05876          8 GAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEG-FDVHGVMCDVRHREEVTHLADEAFRLLGHVDV   86 (275)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999877777777776554 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||||+....                   ...+.+.+++++.+++|+.+++++++.++|.|.+++ .|+||++||..+.
T Consensus        87 li~nAg~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~  147 (275)
T PRK05876         87 VFSNAGIVVGG-------------------PIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL  147 (275)
T ss_pred             EEECCCcCCCC-------------------CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc
Confidence            99999985321                   234567788999999999999999999999997665 6899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++.+.|+.+|+
T Consensus       148 ~~~~~~~~Y~asK~  161 (275)
T PRK05876        148 VPNAGLGAYGVAKY  161 (275)
T ss_pred             cCCCCCchHHHHHH
Confidence            99999999999986

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=5.1e-30  Score=179.66  Aligned_cols=149  Identities=34%  Similarity=0.505  Sum_probs=131.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC--hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD--EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +++||||++|||++++++|+++|+ +|++++|+  .+..++..+++...+ .++.++++|++++++++++++++.+.+++
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-ccccccccccccccccccccccccccccc
Confidence            589999999999999999999966 68888888  566677778888655 67999999999999999999999999999


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|++|||+|....                   ....+.+.++++++|++|+.+++.+.+.++|    ++.|+||++||+.
T Consensus        81 ld~li~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~  137 (167)
T PF00106_consen   81 LDILINNAGIFSD-------------------GSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIA  137 (167)
T ss_dssp             ESEEEEECSCTTS-------------------BSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGG
T ss_pred             ccccccccccccc-------------------cccccccchhhhhccccccceeeeeeehhee----ccccceEEecchh
Confidence            9999999998652                   2344558899999999999999999999999    4469999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.|+...|+++|+
T Consensus       138 ~~~~~~~~~~Y~aska  153 (167)
T PF00106_consen  138 GVRGSPGMSAYSASKA  153 (167)
T ss_dssp             GTSSSTTBHHHHHHHH
T ss_pred             hccCCCCChhHHHHHH
Confidence            9999999999999985

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=189.00  Aligned_cols=154  Identities=25%  Similarity=0.266  Sum_probs=135.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.++.++..+++...+ .++.++.+|++|+++++++++++.++++++|+
T Consensus         8 ~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (254)
T PRK07478          8 VAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEG-GEAVALAGDVRDEAYAKALVALAVERFGGLDI   86 (254)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            58999999999999999999999999999999887777777776654 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc-
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK-  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~-  159 (174)
                      +|||||.....                  .+..+.+.+++++.+++|+.++++++++++|.|++++.++||++||..+. 
T Consensus        87 li~~ag~~~~~------------------~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~  148 (254)
T PRK07478         87 AFNNAGTLGEM------------------GPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHT  148 (254)
T ss_pred             EEECCCCCCCC------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhc
Confidence            99999974321                  12345677889999999999999999999999988888999999999886 


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       149 ~~~~~~~~Y~~sK~  162 (254)
T PRK07478        149 AGFPGMAAYAASKA  162 (254)
T ss_pred             cCCCCcchhHHHHH
Confidence            47788899999985

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-29  Score=189.50  Aligned_cols=154  Identities=26%  Similarity=0.284  Sum_probs=135.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc-CCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||++++++|+++|++|++++|+.+..++..+++... .+.++.++++|++|+++++++++++.++++++|
T Consensus         9 ~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   88 (260)
T PRK07063          9 VALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLD   88 (260)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCc
Confidence            5899999999999999999999999999999987777777777653 234588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....                   ...+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+.
T Consensus        89 ~li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  149 (260)
T PRK07063         89 VLVNNAGINVFA-------------------DPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAF  149 (260)
T ss_pred             EEEECCCcCCCC-------------------ChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhc
Confidence            999999974321                   1234577889999999999999999999999988877999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       150 ~~~~~~~~Y~~sKa  163 (260)
T PRK07063        150 KIIPGCFPYPVAKH  163 (260)
T ss_pred             cCCCCchHHHHHHH
Confidence            98888899999885

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-29  Score=192.12  Aligned_cols=153  Identities=25%  Similarity=0.277  Sum_probs=131.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh---------hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE---------KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      ++|||||++|||+++|++|+++|++|++++++.         +...+..+++...+ .++.++.+|++|+++++++++++
T Consensus         8 ~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dv~~~~~v~~~~~~~   86 (286)
T PRK07791          8 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG-GEAVANGDDIADWDGAANLVDAA   86 (286)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcC-CceEEEeCCCCCHHHHHHHHHHH
Confidence            589999999999999999999999999998765         45556666676544 35888999999999999999999


Q ss_pred             HhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-----
Q 035504           72 RSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-----  146 (174)
Q Consensus        72 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-----  146 (174)
                      .+.+|++|++|||||+...                   ..+.+.+.++|++.+++|+.++++++|+++|+|+++.     
T Consensus        87 ~~~~g~id~lv~nAG~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~  147 (286)
T PRK07791         87 VETFGGLDVLVNNAGILRD-------------------RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRA  147 (286)
T ss_pred             HHhcCCCCEEEECCCCCCC-------------------CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCC
Confidence            9999999999999998432                   1234567788999999999999999999999997542     


Q ss_pred             -CCeEEEEecCCCcccCCCCcceeeecc
Q 035504          147 -LPRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       147 -~g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                       .|+||++||.++..+.++...|+++|+
T Consensus       148 ~~g~Iv~isS~~~~~~~~~~~~Y~asKa  175 (286)
T PRK07791        148 VDARIINTSSGAGLQGSVGQGNYSAAKA  175 (286)
T ss_pred             CCcEEEEeCchhhCcCCCCchhhHHHHH
Confidence             379999999999999999999999985

>PRK08589 short chain dehydrogenase; Validated

Probab=99.97  E-value=2e-29  Score=189.84  Aligned_cols=152  Identities=26%  Similarity=0.399  Sum_probs=133.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+ +...+..+++.+.+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus         8 ~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   85 (272)
T PRK08589          8 VAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNG-GKAKAYHVDISDEQQVKDFASEIKEQFGRVDV   85 (272)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcC-CeEEEEEeecCCHHHHHHHHHHHHHHcCCcCE
Confidence            58999999999999999999999999999999 66677777776544 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                  ....+.+.+.+++++++|+.++++++++++|+|++++ |+||++||..+..
T Consensus        86 li~~Ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~  146 (272)
T PRK08589         86 LFNNAGVDNAA------------------GRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQA  146 (272)
T ss_pred             EEECCCCCCCC------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcC
Confidence            99999975321                  1234557788999999999999999999999998775 8999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+++|+
T Consensus       147 ~~~~~~~Y~asKa  159 (272)
T PRK08589        147 ADLYRSGYNAAKG  159 (272)
T ss_pred             CCCCCchHHHHHH
Confidence            8889999999985

>PRK05599 hypothetical protein; Provisional

Probab=99.97  E-value=2.4e-29  Score=186.87  Aligned_cols=153  Identities=22%  Similarity=0.180  Sum_probs=132.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||+++|++|+ +|++|++++|+.+..++..+++++.++.++.++.+|++|+++++++++++.+.+|++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            58999999999999999999 59999999999888888888887766555888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||||.....                   +..+.+.+++.+.+++|+.+++.+++.++|.|.+++ .|+||++||..+.
T Consensus        81 lv~nag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~  141 (246)
T PRK05599         81 AVVAFGILGDQ-------------------ERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGW  141 (246)
T ss_pred             EEEecCcCCCc-------------------hhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccc
Confidence            99999985321                   112334566777899999999999999999997664 6999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       142 ~~~~~~~~Y~asKa  155 (246)
T PRK05599        142 RARRANYVYGSTKA  155 (246)
T ss_pred             cCCcCCcchhhHHH
Confidence            99899999999986

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=189.02  Aligned_cols=151  Identities=19%  Similarity=0.208  Sum_probs=128.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||+++|++|+++|++|++++|+..  .+..++++..+ .++.++.+|++|+++++++++++.+.+|++|+
T Consensus        10 ~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481         10 VAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALG-RKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999988643  23334444433 45889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||||.....                   ++.+.+.++|++++++|+.+++.+++.++|.|++++ .|+||++||..+.
T Consensus        87 lv~~ag~~~~~-------------------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~  147 (251)
T PRK12481         87 LINNAGIIRRQ-------------------DLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSF  147 (251)
T ss_pred             EEECCCcCCCC-------------------CcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhc
Confidence            99999985321                   234567788999999999999999999999997654 5899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       148 ~~~~~~~~Y~asK~  161 (251)
T PRK12481        148 QGGIRVPSYTASKS  161 (251)
T ss_pred             CCCCCCcchHHHHH
Confidence            98888899999985

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=3.7e-29  Score=187.15  Aligned_cols=160  Identities=16%  Similarity=0.140  Sum_probs=134.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+ .+..++..+++....+.++.++.+|++|+++++++++++.+.++++|
T Consensus        10 ~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   89 (260)
T PRK08416         10 TLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVD   89 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCcc
Confidence            58999999999999999999999999988764 44455556666554445689999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||......             ...+.++.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+.
T Consensus        90 ~lv~nAg~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  156 (260)
T PRK08416         90 FFISNAIISGRAV-------------VGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNL  156 (260)
T ss_pred             EEEECcccccccc-------------ccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccc
Confidence            9999999753211             001123455677889999999999999999999999988877999999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|....|+.+|+
T Consensus       157 ~~~~~~~~Y~asK~  170 (260)
T PRK08416        157 VYIENYAGHGTSKA  170 (260)
T ss_pred             cCCCCcccchhhHH
Confidence            88899999999985

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=3e-29  Score=186.98  Aligned_cols=152  Identities=16%  Similarity=0.162  Sum_probs=127.7

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||+  +|||+++|++|+++|++|++++|+ ++..+..+++.   ..++.++++|++|+++++++++++.+++|++
T Consensus         9 ~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          9 KIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKLV---DEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             EEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhhc---cCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999  899999999999999999999987 33444444442   2357889999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||...+..               ...++.+.+.++|++.+++|+.+++++++.++|.|++  .|+||++||..+
T Consensus        85 D~lv~nAg~~~~~~---------------~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~  147 (252)
T PRK06079         85 DGIVHAIAYAKKEE---------------LGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGS  147 (252)
T ss_pred             CEEEEccccccccc---------------ccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCc
Confidence            99999999853210               0123456688899999999999999999999999964  389999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|+...|+.+|+
T Consensus       148 ~~~~~~~~~Y~asKa  162 (252)
T PRK06079        148 ERAIPNYNVMGIAKA  162 (252)
T ss_pred             cccCCcchhhHHHHH
Confidence            988889999999985

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=4.6e-29  Score=187.85  Aligned_cols=154  Identities=15%  Similarity=0.143  Sum_probs=126.2

Q ss_pred             CEEEecCCC--chhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANK--GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++  |||+++|++|+++|++|++++|+... .+..+++.+..+. ...+++|++|.++++++++++.+++|++
T Consensus         9 ~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~-~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (271)
T PRK06505          9 RGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL-GKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKKWGKL   86 (271)
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH-HHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            589999996  99999999999999999999987533 2233444332222 3578999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||+....+               ...++.+.+.++|++++++|+.++++++|+++|+|++  .|+||++||..+
T Consensus        87 D~lVnnAG~~~~~~---------------~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~  149 (271)
T PRK06505         87 DFVVHAIGFSDKNE---------------LKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGS  149 (271)
T ss_pred             CEEEECCccCCCcc---------------ccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCc
Confidence            99999999743210               0013446688899999999999999999999999974  389999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|+...|+++|+
T Consensus       150 ~~~~~~~~~Y~asKa  164 (271)
T PRK06505        150 TRVMPNYNVMGVAKA  164 (271)
T ss_pred             cccCCccchhhhhHH
Confidence            888899999999985

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.1e-29  Score=193.80  Aligned_cols=153  Identities=26%  Similarity=0.322  Sum_probs=136.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++++|+++|++|++++|+.+..++..+++.+.+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus        10 ~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g-~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~   88 (334)
T PRK07109         10 VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAG-GEALAVVADVADAEAVQAAADRAEEELGPIDT   88 (334)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC-CcEEEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            58999999999999999999999999999999887777777776654 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   .+..+.+.+++++.+++|+.+++++++.++|+|++++.|+||++||..+..
T Consensus        89 lInnAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~  149 (334)
T PRK07109         89 WVNNAMVTVF-------------------GPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR  149 (334)
T ss_pred             EEECCCcCCC-------------------CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc
Confidence            9999997432                   123456788999999999999999999999999988789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|.+..|+.+|+
T Consensus       150 ~~~~~~~Y~asK~  162 (334)
T PRK07109        150 SIPLQSAYCAAKH  162 (334)
T ss_pred             CCCcchHHHHHHH
Confidence            9999999999986

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=6.4e-29  Score=186.09  Aligned_cols=156  Identities=15%  Similarity=0.106  Sum_probs=127.5

Q ss_pred             CEEEecC--CCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGA--NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||  ++|||+++|++|+++|++|++++|+. ...+..+++....+. ...+++|++|+++++++++++.+++|++
T Consensus         8 ~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   85 (261)
T PRK08690          8 KILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS-ELVFRCDVASDDEINQVFADLGKHWDGL   85 (261)
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC-ceEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5899997  68999999999999999999988763 344555556544333 5578999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||+......            ..  ..+.+.+.++|++.+++|+.++++++|.++|.|++++ |+||++||..+
T Consensus        86 D~lVnnAG~~~~~~~------------~~--~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g~Iv~iss~~~  150 (261)
T PRK08690         86 DGLVHSIGFAPKEAL------------SG--DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-SAIVALSYLGA  150 (261)
T ss_pred             cEEEECCccCCcccc------------cc--chhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-cEEEEEccccc
Confidence            999999998532100            00  0123456788999999999999999999999997654 89999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|+...|+.+|+
T Consensus       151 ~~~~~~~~~Y~asKa  165 (261)
T PRK08690        151 VRAIPNYNVMGMAKA  165 (261)
T ss_pred             ccCCCCcccchhHHH
Confidence            988899999999985

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=9.8e-29  Score=185.00  Aligned_cols=154  Identities=17%  Similarity=0.161  Sum_probs=127.2

Q ss_pred             CEEEecCCC--chhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANK--GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||++  |||+++|++|+++|++|++++|+. ..++..+++.+..+. ..++++|++|+++++++++++.+++|++
T Consensus        10 ~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (260)
T PRK06603         10 KGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEKWGSF   87 (260)
T ss_pred             EEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            489999997  999999999999999999998873 344445555544322 3467899999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||+|......               ...++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||..+
T Consensus        88 DilVnnag~~~~~~---------------~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~  150 (260)
T PRK06603         88 DFLLHGMAFADKNE---------------LKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGA  150 (260)
T ss_pred             cEEEEccccCCccc---------------ccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCcc
Confidence            99999999743210               0123456788999999999999999999999999964  489999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|+...|+.+|+
T Consensus       151 ~~~~~~~~~Y~asKa  165 (260)
T PRK06603        151 EKVIPNYNVMGVAKA  165 (260)
T ss_pred             ccCCCcccchhhHHH
Confidence            888888999999985

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=7.5e-29  Score=185.37  Aligned_cols=153  Identities=15%  Similarity=0.113  Sum_probs=126.1

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChh---HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEK---RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      +++||||+  +|||+++|++|+++|++|++++|+..   ..++..++++   +.++..+++|++|+++++++++++.+++
T Consensus         9 ~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          9 TYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE---GQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC---CCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            58999997  89999999999999999999987532   2223333322   2458889999999999999999999999


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS  155 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS  155 (174)
                      |++|++|||||+....               +...++.+.+.++|.+.+++|+.+++++++.++|.|++  .|+||++||
T Consensus        86 g~ld~lv~nag~~~~~---------------~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS  148 (257)
T PRK08594         86 GVIHGVAHCIAFANKE---------------DLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTY  148 (257)
T ss_pred             CCccEEEECcccCCCC---------------cCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcc
Confidence            9999999999974321               00123456678889999999999999999999999965  489999999


Q ss_pred             CCCcccCCCCcceeeecc
Q 035504          156 NMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       156 ~~~~~~~~~~~~y~~~k~  173 (174)
                      ..+..+.|+...|+++|+
T Consensus       149 ~~~~~~~~~~~~Y~asKa  166 (257)
T PRK08594        149 LGGERVVQNYNVMGVAKA  166 (257)
T ss_pred             cCCccCCCCCchhHHHHH
Confidence            999999899899999985

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.96  E-value=1.3e-28  Score=184.41  Aligned_cols=155  Identities=33%  Similarity=0.403  Sum_probs=134.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC--CceeEEEeecCChhhHHHHHHHHHhh-cCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVADPATIHSLADFVRSQ-FGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~-~g~   77 (174)
                      +++|||+++|||+++|++|++.|++|++++|+.+..++..+++...+.  .++..+.||+++++++++++++..++ +|+
T Consensus        10 valVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~Gk   89 (270)
T KOG0725|consen   10 VALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGK   89 (270)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCC
Confidence            589999999999999999999999999999999888888887765433  36899999999999999999999998 799


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhh-HHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYG-SKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ||++|||||...+..                  +..+.++++|++.|++|+.| .+.+.+.+.|.+++++.|+|+++||.
T Consensus        90 idiLvnnag~~~~~~------------------~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~  151 (270)
T KOG0725|consen   90 IDILVNNAGALGLTG------------------SILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSV  151 (270)
T ss_pred             CCEEEEcCCcCCCCC------------------ChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            999999999965421                  45778889999999999995 67777888888888888999999999


Q ss_pred             CCcccCCCC-cceeeecc
Q 035504          157 MGKLKNTWQ-GAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~-~~y~~~k~  173 (174)
                      .+..+.+.. ..|+.+|+
T Consensus       152 ~~~~~~~~~~~~Y~~sK~  169 (270)
T KOG0725|consen  152 AGVGPGPGSGVAYGVSKA  169 (270)
T ss_pred             ccccCCCCCcccchhHHH
Confidence            999876666 79999884

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.96  E-value=6.5e-29  Score=185.77  Aligned_cols=155  Identities=23%  Similarity=0.273  Sum_probs=128.4

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChh--HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEK--RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +++||||+  +|||+++|++|+++|++|++++++.+  +.++..+++.+.. .+..++.+|++|+++++++++++.+++|
T Consensus         8 ~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~~g   86 (258)
T PRK07370          8 KALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL-NPSLFLPCDVQDDAQIEETFETIKQKWG   86 (258)
T ss_pred             EEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc-CcceEeecCcCCHHHHHHHHHHHHHHcC
Confidence            58999986  89999999999999999998876543  2344555565443 2467889999999999999999999999


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|++|||||......               ...++.+.+.++|+++|++|+.++++++|.++|.|++  .|+||++||.
T Consensus        87 ~iD~lv~nag~~~~~~---------------~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~  149 (258)
T PRK07370         87 KLDILVHCLAFAGKEE---------------LIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYL  149 (258)
T ss_pred             CCCEEEEcccccCccc---------------ccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEecc
Confidence            9999999999743210               0123456688899999999999999999999999974  3899999999


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      .+..+.|....|+.+|+
T Consensus       150 ~~~~~~~~~~~Y~asKa  166 (258)
T PRK07370        150 GGVRAIPNYNVMGVAKA  166 (258)
T ss_pred             ccccCCcccchhhHHHH
Confidence            99988899999999985

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=1.6e-28  Score=184.92  Aligned_cols=154  Identities=14%  Similarity=0.133  Sum_probs=126.5

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+  +|||+++|++|+++|++|++++|+. ...+..+++.+..+. ...+++|++|+++++++++++.+++|++
T Consensus        12 ~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~~-~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   89 (272)
T PRK08159         12 RGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELGA-FVAGHCDVTDEASIDAVFETLEKKWGKL   89 (272)
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcCC-ceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            58999997  8999999999999999999998863 233334444433222 5578999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||+.....               ...++.+.+.++|++.|++|+.+++++++.++|.|++  .|+||++||..+
T Consensus        90 D~lv~nAG~~~~~~---------------~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~  152 (272)
T PRK08159         90 DFVVHAIGFSDKDE---------------LTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGA  152 (272)
T ss_pred             cEEEECCcccCccc---------------cccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEecccc
Confidence            99999999853210               0123456678899999999999999999999999964  389999999988


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|+...|+.+|+
T Consensus       153 ~~~~p~~~~Y~asKa  167 (272)
T PRK08159        153 EKVMPHYNVMGVAKA  167 (272)
T ss_pred             ccCCCcchhhhhHHH
Confidence            888899999999986

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.96  E-value=8.5e-29  Score=183.66  Aligned_cols=151  Identities=31%  Similarity=0.441  Sum_probs=131.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC--Cc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG--KL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g--~i   78 (174)
                      +++|||+.+|+|+.+|++|.++|++|+..+.+++.+++...+..   ..++..++.||+++++|+++.+.++++.+  ++
T Consensus        31 ~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL  107 (322)
T KOG1610|consen   31 AVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL  107 (322)
T ss_pred             EEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence            48999999999999999999999999999977766655554443   24688889999999999999999999764  69


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      ..||||||+..+..             +.+|.     +.+++++++++|+.|++.++++++|++++++ ||||++||+.|
T Consensus       108 wglVNNAGi~~~~g-------------~~ewl-----~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~G  168 (322)
T KOG1610|consen  108 WGLVNNAGISGFLG-------------PDEWL-----TVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLG  168 (322)
T ss_pred             eeEEeccccccccC-------------ccccc-----cHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEeccccc
Confidence            99999999865432             34454     5699999999999999999999999999887 99999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|..++||.||+
T Consensus       169 R~~~p~~g~Y~~SK~  183 (322)
T KOG1610|consen  169 RVALPALGPYCVSKF  183 (322)
T ss_pred             CccCcccccchhhHH
Confidence            999999999999996

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=1.5e-28  Score=183.85  Aligned_cols=154  Identities=18%  Similarity=0.188  Sum_probs=126.0

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+  +|||+++|++|+++|++|++++|+.+. .+..+++.+..+ ...++++|++|+++++++++++.+++|++
T Consensus        12 ~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~l   89 (258)
T PRK07533         12 RGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVEPLAEELD-APIFLPLDVREPGQLEAVFARIAEEWGRL   89 (258)
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHHHhhc-cceEEecCcCCHHHHHHHHHHHHHHcCCC
Confidence            58999998  599999999999999999999997542 223333433222 25678999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||......               ...++.+.+.++|+++|++|+.+++++++.++|.|++  .|+||++||..+
T Consensus        90 d~lv~nAg~~~~~~---------------~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~  152 (258)
T PRK07533         90 DFLLHSIAFAPKED---------------LHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGA  152 (258)
T ss_pred             CEEEEcCccCCccc---------------ccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEecccc
Confidence            99999999743210               0123456788999999999999999999999999964  489999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.+....|+++|+
T Consensus       153 ~~~~~~~~~Y~asKa  167 (258)
T PRK07533        153 EKVVENYNLMGPVKA  167 (258)
T ss_pred             ccCCccchhhHHHHH
Confidence            888888899999986

>PLN02253 xanthoxin dehydrogenase

Probab=99.96  E-value=1.8e-28  Score=185.18  Aligned_cols=154  Identities=25%  Similarity=0.273  Sum_probs=132.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+.+..++..+++..  +.++.++++|++|+++++++++++.++++++|+
T Consensus        20 ~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~   97 (280)
T PLN02253         20 VALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG--EPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI   97 (280)
T ss_pred             EEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC--CCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            489999999999999999999999999999987665555555532  235889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||......                 ..+.+.+.+++++++++|+.++++++++++|.|.+++.|+|+++||..+..
T Consensus        98 li~~Ag~~~~~~-----------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~  160 (280)
T PLN02253         98 MVNNAGLTGPPC-----------------PDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI  160 (280)
T ss_pred             EEECCCcCCCCC-----------------CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc
Confidence            999999743210                 123456788899999999999999999999999877779999999999998


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       161 ~~~~~~~Y~~sK~  173 (280)
T PLN02253        161 GGLGPHAYTGSKH  173 (280)
T ss_pred             cCCCCcccHHHHH
Confidence            8888889999986

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-28  Score=187.93  Aligned_cols=151  Identities=25%  Similarity=0.288  Sum_probs=131.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+.+..++..+++..  +.++..+.+|++|+++++++++++.+.++++|+
T Consensus        11 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   88 (296)
T PRK05872         11 VVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG--DDRVLTVVADVTDLAAMQAAAEEAVERFGGIDV   88 (296)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            589999999999999999999999999999998777776666642  234677789999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+...                   .++.+.+.+++++.+++|+.+++++++.++|.|.+.+ |+||++||..+..
T Consensus        89 vI~nAG~~~~-------------------~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~  148 (296)
T PRK05872         89 VVANAGIASG-------------------GSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERR-GYVLQVSSLAAFA  148 (296)
T ss_pred             EEECCCcCCC-------------------cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHhhcC
Confidence            9999998532                   1234567888999999999999999999999997754 8999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       149 ~~~~~~~Y~asKa  161 (296)
T PRK05872        149 AAPGMAAYCASKA  161 (296)
T ss_pred             CCCCchHHHHHHH
Confidence            9999999999985

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=2e-28  Score=183.58  Aligned_cols=155  Identities=16%  Similarity=0.105  Sum_probs=126.8

Q ss_pred             CEEEecCCC--chhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANK--GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||++  |||+++|++|+++|++|++++|+ +..++..+++....+ ...++.+|++|+++++++++++.+++|++
T Consensus         8 ~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   85 (262)
T PRK07984          8 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLG-SDIVLPCDVAEDASIDAMFAELGKVWPKF   85 (262)
T ss_pred             EEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccC-CceEeecCCCCHHHHHHHHHHHHhhcCCC
Confidence            589999985  99999999999999999999887 344455566655443 36778999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||+.....              .....+.+.+.++|++.+++|+.+++.+++.++|.|+ + .|+||++||..+
T Consensus        86 D~linnAg~~~~~~--------------~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~g~Iv~iss~~~  149 (262)
T PRK07984         86 DGFVHSIGFAPGDQ--------------LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-P-GSALLTLSYLGA  149 (262)
T ss_pred             CEEEECCccCCccc--------------cCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-C-CcEEEEEecCCC
Confidence            99999999743210              0001134567889999999999999999999999775 3 389999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|....|+++|+
T Consensus       150 ~~~~~~~~~Y~asKa  164 (262)
T PRK07984        150 ERAIPNYNVMGLAKA  164 (262)
T ss_pred             CCCCCCcchhHHHHH
Confidence            888888899999986

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2e-28  Score=182.91  Aligned_cols=153  Identities=22%  Similarity=0.239  Sum_probs=132.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+...+..+++...+  ++.++.+|++|+++++++++++.++++++|+
T Consensus         4 ~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          4 KVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA--RVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC--eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            58999999999999999999999999999999776666655554332  6889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|......                  ...+.+.+++++++++|+.|++.+++.++|.|++++.|+||++||..+..
T Consensus        82 lv~~ag~~~~~~------------------~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~  143 (257)
T PRK07024         82 VIANAGISVGTL------------------TEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVR  143 (257)
T ss_pred             EEECCCcCCCcc------------------ccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC
Confidence            999999753211                  11224678889999999999999999999999888889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+.+|+
T Consensus       144 ~~~~~~~Y~asK~  156 (257)
T PRK07024        144 GLPGAGAYSASKA  156 (257)
T ss_pred             CCCCCcchHHHHH
Confidence            9999999999886

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.4e-28  Score=183.24  Aligned_cols=153  Identities=24%  Similarity=0.275  Sum_probs=130.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+.+..++..+++...+ .++..+.+|++|+++++++++++.+.++++|+
T Consensus        11 ~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T PRK05867         11 RALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG-GKVVPVCCDVSQHQQVTSMLDQVTAELGGIDI   89 (253)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            58999999999999999999999999999999877777777776654 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||||.....                   +..+.+.+++++++++|+.+++.++++++|.|.+++ .|+||++||..+.
T Consensus        90 lv~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  150 (253)
T PRK05867         90 AVCNAGIITVT-------------------PMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGH  150 (253)
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhc
Confidence            99999974321                   234557788999999999999999999999997654 5799999999887


Q ss_pred             ccC-C-CCcceeeecc
Q 035504          160 LKN-T-WQGAICYLTF  173 (174)
Q Consensus       160 ~~~-~-~~~~y~~~k~  173 (174)
                      .+. + ....|+++|+
T Consensus       151 ~~~~~~~~~~Y~asKa  166 (253)
T PRK05867        151 IINVPQQVSHYCASKA  166 (253)
T ss_pred             CCCCCCCccchHHHHH
Confidence            543 3 3478999885

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.4e-28  Score=183.90  Aligned_cols=149  Identities=30%  Similarity=0.416  Sum_probs=131.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+.+...+..+++.     ++.++.+|++|+++++++++++.+.++++|+
T Consensus         7 ~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825          7 VVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999998776665555543     4778899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   ...+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..+..
T Consensus        82 li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  142 (273)
T PRK07825         82 LVNNAGVMPVG-------------------PFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI  142 (273)
T ss_pred             EEECCCcCCCC-------------------ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC
Confidence            99999985421                   23455678899999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       143 ~~~~~~~Y~asKa  155 (273)
T PRK07825        143 PVPGMATYCASKH  155 (273)
T ss_pred             CCCCCcchHHHHH
Confidence            9999999999985

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.4e-28  Score=178.74  Aligned_cols=151  Identities=20%  Similarity=0.116  Sum_probs=128.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC-Ccc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG-KLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g-~id   79 (174)
                      +++||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++..+.+|++|+++++++++++.+++| ++|
T Consensus         7 ~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD   85 (227)
T PRK08862          7 IILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALT-DNVYSFQLKDFSQESIRHLFDAIEQQFNRAPD   85 (227)
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CCeEEEEccCCCHHHHHHHHHHHHHHhCCCCC
Confidence            48999999999999999999999999999999888777777776654 3478889999999999999999999999 999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~  158 (174)
                      ++|||+|.....                  ..+.+.+.+++.+.+++|+.+++.+++.++|+|++++ +|+||++||..+
T Consensus        86 ~li~nag~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~  147 (227)
T PRK08862         86 VLVNNWTSSPLP------------------SLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD  147 (227)
T ss_pred             EEEECCccCCCC------------------CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC
Confidence            999999863221                  1234557788889999999999999999999998654 699999999765


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      .   ++...|+.+|+
T Consensus       148 ~---~~~~~Y~asKa  159 (227)
T PRK08862        148 H---QDLTGVESSNA  159 (227)
T ss_pred             C---CCcchhHHHHH
Confidence            4   45678998885

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.9e-28  Score=186.28  Aligned_cols=157  Identities=20%  Similarity=0.202  Sum_probs=126.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh----------hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE----------KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADF   70 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~   70 (174)
                      +++||||++|||+++|++|+++|++|++++|+.          +...+..+++...+ .++.++.+|++|++++++++++
T Consensus        10 ~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dv~~~~~v~~~~~~   88 (305)
T PRK08303         10 VALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAG-GRGIAVQVDHLVPEQVRALVER   88 (305)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHH
Confidence            589999999999999999999999999999973          23444555555443 4578899999999999999999


Q ss_pred             HHhhcCCccEEEecc-cccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCe
Q 035504           71 VRSQFGKLDILVNNA-AIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPR  149 (174)
Q Consensus        71 ~~~~~g~id~li~~a-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~  149 (174)
                      +.+++|+||++|||| |......               ...++.+.+.+++++++++|+.++++++++++|.|++++.|+
T Consensus        89 ~~~~~g~iDilVnnA~g~~~~~~---------------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~  153 (305)
T PRK08303         89 IDREQGRLDILVNDIWGGEKLFE---------------WGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGL  153 (305)
T ss_pred             HHHHcCCccEEEECCcccccccc---------------cCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcE
Confidence            999999999999999 7521100               001234567788999999999999999999999998777799


Q ss_pred             EEEEecCCCcc---cCCCCcceeeecc
Q 035504          150 IVNVSSNMGKL---KNTWQGAICYLTF  173 (174)
Q Consensus       150 iv~isS~~~~~---~~~~~~~y~~~k~  173 (174)
                      ||++||..+..   +.++...|+.+|+
T Consensus       154 IV~isS~~~~~~~~~~~~~~~Y~asKa  180 (305)
T PRK08303        154 VVEITDGTAEYNATHYRLSVFYDLAKT  180 (305)
T ss_pred             EEEECCccccccCcCCCCcchhHHHHH
Confidence            99999987654   2335678998885

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.96  E-value=3.2e-28  Score=181.98  Aligned_cols=154  Identities=21%  Similarity=0.187  Sum_probs=131.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..++++..+  ++.++.+|++|+++++++++++.++++++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG--EVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            48999999999999999999999999999999877777777776543  5788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhcc-CCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQ-LSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~-~~~~g~iv~isS~~~~  159 (174)
                      +|||||......                 .+..+.+.+++.+.+.+|+.+++.+++.++|.|. +++.|+||++||..+.
T Consensus        80 li~naG~~~~~~-----------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~  142 (259)
T PRK08340         80 LVWNAGNVRCEP-----------------CMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVK  142 (259)
T ss_pred             EEECCCCCCCCc-----------------cccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccC
Confidence            999999743110                 1234556788888899999999999999999876 4556999999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+.+|+
T Consensus       143 ~~~~~~~~y~~sKa  156 (259)
T PRK08340        143 EPMPPLVLADVTRA  156 (259)
T ss_pred             CCCCCchHHHHHHH
Confidence            88888899998885

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.6e-28  Score=180.95  Aligned_cols=153  Identities=18%  Similarity=0.202  Sum_probs=132.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+..++..+++...+ .++.++++|++|+++++++++++.+.++++|+
T Consensus         3 ~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          3 VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFP-GQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            58999999999999999999999999999999776666666665443 45889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC-CCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS-DLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~isS~~~~  159 (174)
                      +|||+|....                   .+..+.+.++|++++++|+.++++++++++|.|.++ ..|+||++||..+.
T Consensus        82 lI~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~  142 (252)
T PRK07677         82 LINNAAGNFI-------------------CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAW  142 (252)
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhc
Confidence            9999986321                   123456788899999999999999999999998664 35899999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       143 ~~~~~~~~Y~~sKa  156 (252)
T PRK07677        143 DAGPGVIHSAAAKA  156 (252)
T ss_pred             cCCCCCcchHHHHH
Confidence            88888899999885

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.96  E-value=2.9e-28  Score=181.58  Aligned_cols=153  Identities=18%  Similarity=0.231  Sum_probs=134.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+.+...+..+++...+ .++..+.+|++|+++++++++++.++++++|+
T Consensus        11 ~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   89 (254)
T PRK08085         11 NILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEG-IKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDV   89 (254)
T ss_pred             EEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC-CeEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            48999999999999999999999999999999877777777776544 35788899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                   +..+.+.++|++.+++|+.+++.+++++++.|.+++.++||++||..+..
T Consensus        90 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~  150 (254)
T PRK08085         90 LINNAGIQRRH-------------------PFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL  150 (254)
T ss_pred             EEECCCcCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc
Confidence            99999974321                   23455778899999999999999999999999877779999999999998


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       151 ~~~~~~~Y~~sK~  163 (254)
T PRK08085        151 GRDTITPYAASKG  163 (254)
T ss_pred             CCCCCcchHHHHH
Confidence            8888999999885

>PRK06194 hypothetical protein; Provisional

Probab=99.96  E-value=2.5e-28  Score=184.93  Aligned_cols=153  Identities=28%  Similarity=0.313  Sum_probs=133.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+...+..+++...+ .++.++.+|++|.++++++++++.+.++++|+
T Consensus         8 ~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   86 (287)
T PRK06194          8 VAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQG-AEVLGVRTDVSDAAQVEALADAALERFGAVHL   86 (287)
T ss_pred             EEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998776667767666543 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC------CeEEEEe
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL------PRIVNVS  154 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~------g~iv~is  154 (174)
                      +|||||.....                   ...+.+.+++++.+++|+.++++++++++|.|.++..      |+||++|
T Consensus        87 vi~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~s  147 (287)
T PRK06194         87 LFNNAGVGAGG-------------------LVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTA  147 (287)
T ss_pred             EEECCCCCCCC-------------------CcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeC
Confidence            99999985431                   2234567888899999999999999999999877654      7999999


Q ss_pred             cCCCcccCCCCcceeeecc
Q 035504          155 SNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~~~~~~~~~~y~~~k~  173 (174)
                      |..+..+.++.+.|+.+|+
T Consensus       148 S~~~~~~~~~~~~Y~~sK~  166 (287)
T PRK06194        148 SMAGLLAPPAMGIYNVSKH  166 (287)
T ss_pred             ChhhccCCCCCcchHHHHH
Confidence            9999998889999999985

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.96  E-value=1.6e-28  Score=188.84  Aligned_cols=155  Identities=18%  Similarity=0.249  Sum_probs=126.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcC--C
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFG--K   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g--~   77 (174)
                      +++||||++|||+++|++|+++|++|++++|+.+..++..+++++.++ .++..+.+|+++  ++.+.++++.+.++  +
T Consensus        55 ~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~d  132 (320)
T PLN02780         55 WALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIEGLD  132 (320)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhcCCC
Confidence            589999999999999999999999999999998888888888876543 357888999985  34455555555555  4


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|++|||||+..+..                 ..+.+.+.+++++.+++|+.|++.+++.++|.|.+++.|+||++||..
T Consensus       133 idilVnnAG~~~~~~-----------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a  195 (320)
T PLN02780        133 VGVLINNVGVSYPYA-----------------RFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGA  195 (320)
T ss_pred             ccEEEEecCcCCCCC-----------------cccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechh
Confidence            669999999854211                 123456778899999999999999999999999888889999999999


Q ss_pred             Ccc-c-CCCCcceeeeccC
Q 035504          158 GKL-K-NTWQGAICYLTFL  174 (174)
Q Consensus       158 ~~~-~-~~~~~~y~~~k~~  174 (174)
                      +.. + .|....|+++|++
T Consensus       196 ~~~~~~~p~~~~Y~aSKaa  214 (320)
T PLN02780        196 AIVIPSDPLYAVYAATKAY  214 (320)
T ss_pred             hccCCCCccchHHHHHHHH
Confidence            965 3 5888999999963

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.1e-28  Score=181.68  Aligned_cols=148  Identities=25%  Similarity=0.241  Sum_probs=128.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|++|++++.++++++.+.++++|+
T Consensus         8 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          8 VAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----GERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5899999999999999999999999999999876655555444    235888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                    ..+.+.+++++.+++|+.+++.++++++|.|+ ++.|+||++||..+..
T Consensus        84 lv~~ag~~~~~--------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~  142 (261)
T PRK08265         84 LVNLACTYLDD--------------------GLASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKF  142 (261)
T ss_pred             EEECCCCCCCC--------------------cCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhcc
Confidence            99999974321                    01346788999999999999999999999997 5569999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       143 ~~~~~~~Y~asKa  155 (261)
T PRK08265        143 AQTGRWLYPASKA  155 (261)
T ss_pred             CCCCCchhHHHHH
Confidence            9899999999985

>PRK06398 aldose dehydrogenase; Validated

Probab=99.96  E-value=1.8e-28  Score=183.38  Aligned_cols=142  Identities=27%  Similarity=0.326  Sum_probs=126.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+....            .++.++++|++|+++++++++++.++++++|+
T Consensus         8 ~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   75 (258)
T PRK06398          8 VAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI   75 (258)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            489999999999999999999999999999875421            14788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   .+..+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..
T Consensus        76 li~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  136 (258)
T PRK06398         76 LVNNAGIESY-------------------GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA  136 (258)
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc
Confidence            9999997422                   123456788899999999999999999999999887789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       137 ~~~~~~~Y~~sKa  149 (258)
T PRK06398        137 VTRNAAAYVTSKH  149 (258)
T ss_pred             CCCCCchhhhhHH
Confidence            8899999999985

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.9e-28  Score=187.92  Aligned_cols=152  Identities=26%  Similarity=0.337  Sum_probs=127.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||.++|++|+++|++|++++|+.+..++..+++.+..+ .++.++.+|++|.++++++++++.++++++|
T Consensus        16 ~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD   95 (313)
T PRK05854         16 RAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIH   95 (313)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCcc
Confidence            589999999999999999999999999999998877777777765533 3588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||+..+.                    ..+.+.+.++..|++|+.+++++++.++|.|++. .++||++||..+.
T Consensus        96 ~li~nAG~~~~~--------------------~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~  154 (313)
T PRK05854         96 LLINNAGVMTPP--------------------ERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAAR  154 (313)
T ss_pred             EEEECCccccCC--------------------ccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhc
Confidence            999999985321                    1123556778889999999999999999999766 4899999999876


Q ss_pred             ccC------------CCCcceeeecc
Q 035504          160 LKN------------TWQGAICYLTF  173 (174)
Q Consensus       160 ~~~------------~~~~~y~~~k~  173 (174)
                      .+.            ++...|+.+|+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~Y~~SK~  180 (313)
T PRK05854        155 RGAINWDDLNWERSYAGMRAYSQSKI  180 (313)
T ss_pred             CCCcCcccccccccCcchhhhHHHHH
Confidence            542            34567887774

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.1e-28  Score=181.54  Aligned_cols=153  Identities=24%  Similarity=0.217  Sum_probs=130.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh-HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK-RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||.++|++|+++|++|++++|+.+ ...+..+++...+ .++..+.+|++|+++++++++++.++++++|
T Consensus        10 ~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   88 (254)
T PRK06114         10 VAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAG-RRAIQIAADVTSKADLRAAVARTEAELGALT   88 (254)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999999998754 3455556665544 3588899999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....                   ...+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+.
T Consensus        89 ~li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  149 (254)
T PRK06114         89 LAVNAAGIANAN-------------------PAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGI  149 (254)
T ss_pred             EEEECCCCCCCC-------------------ChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhc
Confidence            999999985321                   2345577889999999999999999999999988888999999999998


Q ss_pred             ccCCC--Ccceeeecc
Q 035504          160 LKNTW--QGAICYLTF  173 (174)
Q Consensus       160 ~~~~~--~~~y~~~k~  173 (174)
                      .+.++  ...|+.+|+
T Consensus       150 ~~~~~~~~~~Y~~sKa  165 (254)
T PRK06114        150 IVNRGLLQAHYNASKA  165 (254)
T ss_pred             CCCCCCCcchHHHHHH
Confidence            76654  678998885

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.96  E-value=6.4e-28  Score=181.98  Aligned_cols=168  Identities=21%  Similarity=0.156  Sum_probs=138.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++.++++|++|++++.++++++.++++++|+
T Consensus        12 ~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   90 (278)
T PRK08277         12 VAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAG-GEALAVKADVLDKESLEQARQQILEDFGPCDI   90 (278)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998777777777776543 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||...+.......    ..........+.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..
T Consensus        91 li~~ag~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~  166 (278)
T PRK08277         91 LINGAGGNHPKATTDNE----FHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT  166 (278)
T ss_pred             EEECCCCCCcccccccc----cccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence            99999975432110000    00001112345677889999999999999999999999999888789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       167 ~~~~~~~Y~~sK~  179 (278)
T PRK08277        167 PLTKVPAYSAAKA  179 (278)
T ss_pred             CCCCCchhHHHHH
Confidence            9899999999985

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=2.3e-28  Score=185.90  Aligned_cols=137  Identities=40%  Similarity=0.584  Sum_probs=123.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc-CCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|||+++|||.++|+.|+++|++|++.+|+.+..++..++++.. ...++.++++|++|.++|+++.+++++..+++|
T Consensus        37 ~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ld  116 (314)
T KOG1208|consen   37 VALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLD  116 (314)
T ss_pred             EEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCcc
Confidence            5899999999999999999999999999999998888888888873 334688999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      ++|||||++.++.                     ..+.|.++..|.+|..|+++|++.++|.|+++..+|||++||..+
T Consensus       117 vLInNAGV~~~~~---------------------~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~  174 (314)
T KOG1208|consen  117 VLINNAGVMAPPF---------------------SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG  174 (314)
T ss_pred             EEEeCcccccCCc---------------------ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence            9999999987532                     234466778899999999999999999999998899999999887

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.96  E-value=6.2e-28  Score=180.97  Aligned_cols=153  Identities=21%  Similarity=0.274  Sum_probs=135.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+...+..+++...+ .++.++++|++|+++++++++++.++++++|+
T Consensus        12 ~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (265)
T PRK07097         12 IALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELG-IEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDI   90 (265)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            48999999999999999999999999999998877766666666544 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   +..+.+.+++++++++|+.+++.+.+.++|+|++++.|+||++||..+..
T Consensus        91 li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  151 (265)
T PRK07097         91 LVNNAGIIKRI-------------------PMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL  151 (265)
T ss_pred             EEECCCCCCCC-------------------CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC
Confidence            99999985421                   23455778899999999999999999999999888789999999999998


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       152 ~~~~~~~Y~~sKa  164 (265)
T PRK07097        152 GRETVSAYAAAKG  164 (265)
T ss_pred             CCCCCccHHHHHH
Confidence            8888899999885

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.96  E-value=4e-28  Score=181.26  Aligned_cols=152  Identities=22%  Similarity=0.309  Sum_probs=131.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+ +..++..+.+...+ .++.++.+|++|+++++++++++.+.+|++|+
T Consensus        17 ~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   94 (258)
T PRK06935         17 VAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEG-RKVTFVQVDLTKPESAEKVVKEALEEFGKIDI   94 (258)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999988 44455555554443 45889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|....                   .+..+.+.+++++.+++|+.++++++++++|+|++++.|+||++||..+..
T Consensus        95 li~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  155 (258)
T PRK06935         95 LVNNAGTIRR-------------------APLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ  155 (258)
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc
Confidence            9999997432                   123455778889999999999999999999999888789999999999998


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       156 ~~~~~~~Y~asK~  168 (258)
T PRK06935        156 GGKFVPAYTASKH  168 (258)
T ss_pred             CCCCchhhHHHHH
Confidence            8888899999885

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=5.8e-28  Score=180.87  Aligned_cols=154  Identities=14%  Similarity=0.105  Sum_probs=123.0

Q ss_pred             CEEEecC--CCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGA--NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||  ++|||+++|++|+++|++|++++|... ..+..+++.+..+. ...+++|++|+++++++++++.+++|++
T Consensus         8 ~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (260)
T PRK06997          8 RILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGS-DLVFPCDVASDEQIDALFASLGQHWDGL   85 (260)
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHHHHHhCCC
Confidence            5899996  689999999999999999999876522 22333344333222 3468999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCccccc-ccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNE-IVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |++|||||.......               +.+ ..+.+.++|++.|++|+.++++++|+++|+|++  .|+||++||..
T Consensus        86 D~lvnnAG~~~~~~~---------------~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~  148 (260)
T PRK06997         86 DGLVHSIGFAPREAI---------------AGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLG  148 (260)
T ss_pred             cEEEEccccCCcccc---------------ccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccc
Confidence            999999997432100               001 234577889999999999999999999999953  38999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.|+...|+.+|+
T Consensus       149 ~~~~~~~~~~Y~asKa  164 (260)
T PRK06997        149 AERVVPNYNTMGLAKA  164 (260)
T ss_pred             cccCCCCcchHHHHHH
Confidence            9888888899999985

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.96  E-value=2.9e-28  Score=185.45  Aligned_cols=153  Identities=16%  Similarity=0.177  Sum_probs=123.5

Q ss_pred             CEEEecC--CCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc--------C-C---CceeEEEeec--CCh---
Q 035504            1 YAVVTGA--NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS--------G-F---DSVIFHQLDV--ADP---   61 (174)
Q Consensus         1 ~~litGa--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--------~-~---~~~~~~~~Dv--~~~---   61 (174)
                      ++|||||  ++|||+++|++|+++|++|++ +|+.+.+++...++.+.        . +   .....+.+|+  ++.   
T Consensus        11 ~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   89 (303)
T PLN02730         11 RAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDV   89 (303)
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccC
Confidence            5899999  899999999999999999998 77766666665555421        1 1   1146788898  433   


Q ss_pred             ---------------hhHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHh
Q 035504           62 ---------------ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRT  126 (174)
Q Consensus        62 ---------------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (174)
                                     ++++++++++.+++|++|+||||||.....                 ..++.+.+.++|+++|++
T Consensus        90 ~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~-----------------~~~~~~~~~e~~~~~~~v  152 (303)
T PLN02730         90 PEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEV-----------------TKPLLETSRKGYLAAISA  152 (303)
T ss_pred             chhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccC-----------------CCChhhCCHHHHHHHHHH
Confidence                           489999999999999999999999863210                 123456788999999999


Q ss_pred             hhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcccCCCC-cceeeecc
Q 035504          127 NYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ-GAICYLTF  173 (174)
Q Consensus       127 n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-~~y~~~k~  173 (174)
                      |+.++++++|.++|.|+++  |+||++||..+..+.|+. ..|+.+|+
T Consensus       153 N~~~~~~l~~~~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~asKa  198 (303)
T PLN02730        153 SSYSFVSLLQHFGPIMNPG--GASISLTYIASERIIPGYGGGMSSAKA  198 (303)
T ss_pred             HhHHHHHHHHHHHHHHhcC--CEEEEEechhhcCCCCCCchhhHHHHH
Confidence            9999999999999999764  999999999998888865 48999986

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.9e-28  Score=178.72  Aligned_cols=154  Identities=27%  Similarity=0.299  Sum_probs=134.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+..++..+++.+.+ .+..++++|++|.++++++++++.+.++++|+
T Consensus        10 ~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   88 (252)
T PRK07035         10 IALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAG-GKAEALACHIGEMEQIDALFAHIRERHGRLDI   88 (252)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999998877777777776554 34788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                  .+..+.+.+++++.+++|+.+++.++++++|+|++++.++|+++||..+..
T Consensus        89 li~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  150 (252)
T PRK07035         89 LVNNAAANPYF------------------GHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS  150 (252)
T ss_pred             EEECCCcCCCC------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC
Confidence            99999863211                  123455778889999999999999999999999888789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++.+.|+.+|+
T Consensus       151 ~~~~~~~Y~~sK~  163 (252)
T PRK07035        151 PGDFQGIYSITKA  163 (252)
T ss_pred             CCCCCcchHHHHH
Confidence            8899999999885

>PRK08643 acetoin reductase; Validated

Probab=99.96  E-value=1.2e-27  Score=178.50  Aligned_cols=153  Identities=27%  Similarity=0.349  Sum_probs=133.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+.+...+...++...+ .++.++++|++|+++++++++++.++++++|+
T Consensus         4 ~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (256)
T PRK08643          4 VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDG-GKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV   82 (256)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999999877777777776544 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||||....                   .+..+.+.+++++.+++|+.+++.+++.+++.|++.+ .++||++||..+.
T Consensus        83 vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  143 (256)
T PRK08643         83 VVNNAGVAPT-------------------TPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGV  143 (256)
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccc
Confidence            9999997432                   1233456788899999999999999999999997764 4799999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       144 ~~~~~~~~Y~~sK~  157 (256)
T PRK08643        144 VGNPELAVYSSTKF  157 (256)
T ss_pred             cCCCCCchhHHHHH
Confidence            99899999999986

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=178.37  Aligned_cols=154  Identities=26%  Similarity=0.296  Sum_probs=135.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+...+..++++..+ .++..+.+|++|.+++.++++++.+.+|++|+
T Consensus         9 ~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   87 (253)
T PRK06172          9 VALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAG-GEALFVACDVTRDAEVKALVEQTIAAYGRLDY   87 (253)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            58999999999999999999999999999999877777777776554 45889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                  .+..+.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+..
T Consensus        88 li~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~  149 (253)
T PRK06172         88 AFNNAGIEIEQ------------------GRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG  149 (253)
T ss_pred             EEECCCCCCCC------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc
Confidence            99999974321                  113455778899999999999999999999999887779999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       150 ~~~~~~~Y~~sKa  162 (253)
T PRK06172        150 AAPKMSIYAASKH  162 (253)
T ss_pred             CCCCCchhHHHHH
Confidence            9899999999985

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.95  E-value=1.8e-27  Score=177.80  Aligned_cols=154  Identities=20%  Similarity=0.236  Sum_probs=133.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+++||.+++++|+++|++|++++|+....++..+++....+ .++.++.+|++|++++.++++++.+.++++|
T Consensus         4 ~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   83 (259)
T PRK12384          4 VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVD   83 (259)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            489999999999999999999999999999987766666666655433 3588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~  158 (174)
                      ++|||||.....                   ...+.+.+++++.+++|+.+++++.++++|.|.+++ .++||++||..+
T Consensus        84 ~vv~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~  144 (259)
T PRK12384         84 LLVYNAGIAKAA-------------------FITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSG  144 (259)
T ss_pred             EEEECCCcCCCC-------------------CcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccc
Confidence            999999874321                   234557788899999999999999999999998765 689999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.+....|+.+|.
T Consensus       145 ~~~~~~~~~Y~~sKa  159 (259)
T PRK12384        145 KVGSKHNSGYSAAKF  159 (259)
T ss_pred             ccCCCCCchhHHHHH
Confidence            888888899999885

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.95  E-value=3.2e-28  Score=180.47  Aligned_cols=154  Identities=20%  Similarity=0.228  Sum_probs=131.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc--CCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF--GKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~--g~i   78 (174)
                      |++||||+.|||+++|++|+++|.+|++++|+.++++.+++|+.+.++-.+.++.+|.++.+.+-   +++.+..  ..|
T Consensus        51 WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~y---e~i~~~l~~~~V  127 (312)
T KOG1014|consen   51 WAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVY---EKLLEKLAGLDV  127 (312)
T ss_pred             EEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhH---HHHHHHhcCCce
Confidence            68999999999999999999999999999999999999999999888767999999999877633   3333332  267


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      .+||||+|..+..+                 ..+.+.+.+.++..+.+|.+++..+++.++|.|.++++|-|+++||.+|
T Consensus       128 gILVNNvG~~~~~P-----------------~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag  190 (312)
T KOG1014|consen  128 GILVNNVGMSYDYP-----------------ESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAG  190 (312)
T ss_pred             EEEEecccccCCCc-----------------HHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccc
Confidence            79999999976432                 1233445556777799999999999999999999999999999999999


Q ss_pred             cccCCCCcceeeeccC
Q 035504          159 KLKNTWQGAICYLTFL  174 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~~  174 (174)
                      ..+.|..+.|+++|.|
T Consensus       191 ~~p~p~~s~ysasK~~  206 (312)
T KOG1014|consen  191 LIPTPLLSVYSASKAF  206 (312)
T ss_pred             cccChhHHHHHHHHHH
Confidence            9999999999999964

>PRK09242 tropinone reductase; Provisional

Probab=99.95  E-value=1.6e-27  Score=177.83  Aligned_cols=154  Identities=26%  Similarity=0.257  Sum_probs=135.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+..++..+++.... +.++.++.+|++++++++++++++.+.++++|
T Consensus        11 ~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   90 (257)
T PRK09242         11 TALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLH   90 (257)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999999999877777777776542 34688999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||+|....                   .+..+.+.+++++.+++|+.+++.++++++|+|++++.++||++||..+.
T Consensus        91 ~li~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~  151 (257)
T PRK09242         91 ILVNNAGGNIR-------------------KAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGL  151 (257)
T ss_pred             EEEECCCCCCC-------------------CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccC
Confidence            99999997421                   12345678889999999999999999999999988877999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+..+.|+.+|+
T Consensus       152 ~~~~~~~~Y~~sK~  165 (257)
T PRK09242        152 THVRSGAPYGMTKA  165 (257)
T ss_pred             CCCCCCcchHHHHH
Confidence            98889999999885

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=1.4e-27  Score=178.31  Aligned_cols=153  Identities=25%  Similarity=0.221  Sum_probs=128.6

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeC-----------hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHH
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARD-----------EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSL   67 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~   67 (174)
                      +++||||+  +|||.++|++|+++|++|++++++           .+...+..+++++.+ .++.++++|++|+++++++
T Consensus         8 ~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~D~~~~~~i~~~   86 (256)
T PRK12859          8 VAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNG-VKVSSMELDLTQNDAPKEL   86 (256)
T ss_pred             EEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHH
Confidence            48999999  499999999999999999988642           122223344455443 4688999999999999999


Q ss_pred             HHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC
Q 035504           68 ADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL  147 (174)
Q Consensus        68 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~  147 (174)
                      ++++.+.+|++|++|||||....                   .+..+.+.+++++.+++|+.+++++++.++|.|++++.
T Consensus        87 ~~~~~~~~g~id~li~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  147 (256)
T PRK12859         87 LNKVTEQLGYPHILVNNAAYSTN-------------------NDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSG  147 (256)
T ss_pred             HHHHHHHcCCCcEEEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC
Confidence            99999999999999999997432                   12345678889999999999999999999999988778


Q ss_pred             CeEEEEecCCCcccCCCCcceeeecc
Q 035504          148 PRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       148 g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      |+||++||..+..+.+++..|+.+|+
T Consensus       148 g~iv~isS~~~~~~~~~~~~Y~~sK~  173 (256)
T PRK12859        148 GRIINMTSGQFQGPMVGELAYAATKG  173 (256)
T ss_pred             eEEEEEcccccCCCCCCchHHHHHHH
Confidence            99999999999998899999999985

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=1.4e-27  Score=178.09  Aligned_cols=153  Identities=27%  Similarity=0.306  Sum_probs=134.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.++..+..+.+...+ .++.++.+|++|+++++++++++.++++++|+
T Consensus        12 ~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   90 (255)
T PRK07523         12 RALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQG-LSAHALAFDVTDHDAVRAAIDAFEAEIGPIDI   90 (255)
T ss_pred             EEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            58999999999999999999999999999999877666666666543 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|...+.                   +..+.+.+++++.+++|+.+++++++.+.+.|++++.|+||++||..+..
T Consensus        91 li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  151 (255)
T PRK07523         91 LVNNAGMQFRT-------------------PLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL  151 (255)
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc
Confidence            99999975321                   23445778899999999999999999999999888789999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|.
T Consensus       152 ~~~~~~~y~~sK~  164 (255)
T PRK07523        152 ARPGIAPYTATKG  164 (255)
T ss_pred             CCCCCccHHHHHH
Confidence            8889999999885

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.4e-27  Score=179.49  Aligned_cols=153  Identities=24%  Similarity=0.367  Sum_probs=135.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.++++++|+
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAG-GDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999877777777776654 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                   ...+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..
T Consensus        81 lI~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~  141 (270)
T PRK05650         81 IVNNAGVASGG-------------------FFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM  141 (270)
T ss_pred             EEECCCCCCCC-------------------CcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC
Confidence            99999985431                   12445778899999999999999999999999888789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       142 ~~~~~~~Y~~sKa  154 (270)
T PRK05650        142 QGPAMSSYNVAKA  154 (270)
T ss_pred             CCCCchHHHHHHH
Confidence            9999999998885

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.95  E-value=4.6e-28  Score=172.02  Aligned_cols=145  Identities=29%  Similarity=0.348  Sum_probs=127.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCC-ceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      .+++||+.+|||++++++|+++|.++.++..+.+. .+...+|++..+. .+.|++|||++..+++++++++.++||.||
T Consensus         7 na~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iD   85 (261)
T KOG4169|consen    7 NALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTID   85 (261)
T ss_pred             eEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceE
Confidence            37999999999999999999999998888776554 4445567665444 699999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC---CCeEEEEecC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD---LPRIVNVSSN  156 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~isS~  156 (174)
                      ++||+||++.                           ..+|++.+.+|+.|.++-++.++|+|.+++   +|-||++||+
T Consensus        86 IlINgAGi~~---------------------------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv  138 (261)
T KOG4169|consen   86 ILINGAGILD---------------------------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSV  138 (261)
T ss_pred             EEEccccccc---------------------------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccc
Confidence            9999999953                           233566799999999999999999999876   5789999999


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      .|..|.|-.+.|+++|+
T Consensus       139 ~GL~P~p~~pVY~AsKa  155 (261)
T KOG4169|consen  139 AGLDPMPVFPVYAASKA  155 (261)
T ss_pred             cccCccccchhhhhccc
Confidence            99999999999999996

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.6e-27  Score=178.29  Aligned_cols=154  Identities=27%  Similarity=0.348  Sum_probs=133.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+..++..+++...+.....++.+|++|+++++++++++.+.++++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            58999999999999999999999999999998777667777776655444566899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC-CCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS-DLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~isS~~~~  159 (174)
                      +|||+|....                   ....+.+.+++++.+++|+.+++.++++++|.|.++ +.|+||++||..+.
T Consensus        82 lv~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~  142 (272)
T PRK07832         82 VMNIAGISAW-------------------GTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGL  142 (272)
T ss_pred             EEECCCCCCC-------------------CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccccc
Confidence            9999997432                   123456788999999999999999999999999764 35899999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+++|+
T Consensus       143 ~~~~~~~~Y~~sK~  156 (272)
T PRK07832        143 VALPWHAAYSASKF  156 (272)
T ss_pred             CCCCCCcchHHHHH
Confidence            88899999999885

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=2.5e-28  Score=171.89  Aligned_cols=147  Identities=29%  Similarity=0.410  Sum_probs=130.0

Q ss_pred             CEEEecCC-CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh-hcCCc
Q 035504            1 YAVVTGAN-KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS-QFGKL   78 (174)
Q Consensus         1 ~~litGa~-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~-~~g~i   78 (174)
                      .++|||++ ||||.+++++|.++|+.|+.+.|+.+...++..+.      ++..++.|+++++++..+..++.+ .+|.+
T Consensus         9 ~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~------gl~~~kLDV~~~~~V~~v~~evr~~~~Gkl   82 (289)
T KOG1209|consen    9 KVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF------GLKPYKLDVSKPEEVVTVSGEVRANPDGKL   82 (289)
T ss_pred             eEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh------CCeeEEeccCChHHHHHHHHHHhhCCCCce
Confidence            47899996 99999999999999999999999988777776543      489999999999999999999998 88999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |.+|||||..-.                   -+..+.+.++++++|++|++|.++++|++.-.+.+.+ |.||+++|..+
T Consensus        83 d~L~NNAG~~C~-------------------~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~  142 (289)
T KOG1209|consen   83 DLLYNNAGQSCT-------------------FPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAG  142 (289)
T ss_pred             EEEEcCCCCCcc-------------------cccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeE
Confidence            999999998322                   1346778899999999999999999999986666665 99999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      +.+.|+.+.|.++|.
T Consensus       143 ~vpfpf~~iYsAsKA  157 (289)
T KOG1209|consen  143 VVPFPFGSIYSASKA  157 (289)
T ss_pred             EeccchhhhhhHHHH
Confidence            999999999999984

>PRK05855 short chain dehydrogenase; Validated

Probab=99.95  E-value=1.2e-27  Score=196.38  Aligned_cols=153  Identities=28%  Similarity=0.322  Sum_probs=136.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+.+..++..++++..+. ++.++.+|++|.+++.++++++.+.+|++|+
T Consensus       317 ~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  395 (582)
T PRK05855        317 LVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGA-VAHAYRVDVSDADAMEAFAEWVRAEHGVPDI  395 (582)
T ss_pred             EEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            589999999999999999999999999999998777777777766553 5889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||||+....                   .+.+.+.+++++++++|+.|+++++++++|.|.+++ .|+||++||.++.
T Consensus       396 lv~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  456 (582)
T PRK05855        396 VVNNAGIGMAG-------------------GFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAY  456 (582)
T ss_pred             EEECCccCCCC-------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence            99999985421                   234567888999999999999999999999998775 4899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       457 ~~~~~~~~Y~~sKa  470 (582)
T PRK05855        457 APSRSLPAYATSKA  470 (582)
T ss_pred             cCCCCCcHHHHHHH
Confidence            99999999999986

>PLN00015 protochlorophyllide reductase

Probab=99.95  E-value=1.4e-27  Score=182.74  Aligned_cols=138  Identities=30%  Similarity=0.353  Sum_probs=117.5

Q ss_pred             EEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            3 VVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         3 litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      |||||++|||++++++|+++| ++|++++|+.+...+..+++... +.++.++.+|++|.++++++++++.+.++++|++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP-KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            699999999999999999999 99999999887766666666432 2358889999999999999999999889999999


Q ss_pred             EecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC--CCeEEEEecCCCc
Q 035504           82 VNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD--LPRIVNVSSNMGK  159 (174)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~isS~~~~  159 (174)
                      |||||+..+.                  ....+.+.+++++.|++|+.|++++++.++|.|++++  .|+||++||..+.
T Consensus        80 InnAG~~~~~------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~  141 (308)
T PLN00015         80 VCNAAVYLPT------------------AKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN  141 (308)
T ss_pred             EECCCcCCCC------------------CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence            9999974321                  0123457788999999999999999999999998776  6899999999875

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.5e-27  Score=178.85  Aligned_cols=150  Identities=25%  Similarity=0.306  Sum_probs=129.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+...+.    ....+.++.++.+|++|++++.++++++.+.++++|+
T Consensus         6 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l----~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180          6 TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADF----EALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             EEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHH----HhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            489999999999999999999999999999987654332    2223346888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   +..+.+.+++++++++|+.++++++++++|+|++++.|+||++||..+..
T Consensus        82 vv~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~  142 (277)
T PRK06180         82 LVNNAGYGHEG-------------------AIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI  142 (277)
T ss_pred             EEECCCccCCc-------------------ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC
Confidence            99999985321                   23345678889999999999999999999999888889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+.+|+
T Consensus       143 ~~~~~~~Y~~sK~  155 (277)
T PRK06180        143 TMPGIGYYCGSKF  155 (277)
T ss_pred             CCCCcchhHHHHH
Confidence            9899999999885

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.95  E-value=2.1e-27  Score=182.23  Aligned_cols=140  Identities=27%  Similarity=0.333  Sum_probs=118.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||++++++|+++| ++|++++|+.+..++..+++... +.++.++.+|++|.++++++++++.+.++++|
T Consensus         5 ~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD   83 (314)
T TIGR01289         5 TVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP-KDSYTIMHLDLGSLDSVRQFVQQFRESGRPLD   83 (314)
T ss_pred             EEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            58999999999999999999999 99999999987776666666432 24578889999999999999999998899999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC--CCeEEEEecCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD--LPRIVNVSSNM  157 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~isS~~  157 (174)
                      ++|||||+..+..                  ...+.+.+++++.|++|+.+++++++.++|.|++++  .|+||++||..
T Consensus        84 ~lI~nAG~~~~~~------------------~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~  145 (314)
T TIGR01289        84 ALVCNAAVYFPTA------------------KEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSIT  145 (314)
T ss_pred             EEEECCCccccCc------------------cccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCc
Confidence            9999999743210                  112346788999999999999999999999998764  48999999997


Q ss_pred             Cc
Q 035504          158 GK  159 (174)
Q Consensus       158 ~~  159 (174)
                      +.
T Consensus       146 ~~  147 (314)
T TIGR01289       146 GN  147 (314)
T ss_pred             cc
Confidence            74

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.8e-27  Score=177.49  Aligned_cols=153  Identities=19%  Similarity=0.197  Sum_probs=128.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||++|||+++|++|+++| ++|++++|+.+. .++..++++..+..++.++.+|++|+++++++++++.+ ++++
T Consensus        10 ~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~g~i   88 (253)
T PRK07904         10 TILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-GGDV   88 (253)
T ss_pred             EEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-cCCC
Confidence            58999999999999999999995 899999998775 66777777766544689999999999999999999886 5899


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||+|.....              +..+     ...++..+.+++|+.+++.+++.++|.|++++.|+||++||..+
T Consensus        89 d~li~~ag~~~~~--------------~~~~-----~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g  149 (253)
T PRK07904         89 DVAIVAFGLLGDA--------------EELW-----QNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAG  149 (253)
T ss_pred             CEEEEeeecCCch--------------hhcc-----cCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhh
Confidence            9999999984321              0111     12345567899999999999999999999888899999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       150 ~~~~~~~~~Y~~sKa  164 (253)
T PRK07904        150 ERVRRSNFVYGSTKA  164 (253)
T ss_pred             cCCCCCCcchHHHHH
Confidence            888788888999885

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=2.9e-27  Score=176.32  Aligned_cols=153  Identities=22%  Similarity=0.311  Sum_probs=135.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+++||.+++++|+++|++|++++|+.+...+..++++..+ .++.++.+|++|++++.++++++.+.++++|+
T Consensus        13 ~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   91 (256)
T PRK06124         13 VALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAG-GAAEALAFDIADEEAVAAAFARIDAEHGRLDI   91 (256)
T ss_pred             EEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            58999999999999999999999999999999777667667776544 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|....                   .+..+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..
T Consensus        92 vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~  152 (256)
T PRK06124         92 LVNNVGARDR-------------------RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV  152 (256)
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc
Confidence            9999997432                   133456778899999999999999999999999888889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       153 ~~~~~~~Y~~sK~  165 (256)
T PRK06124        153 ARAGDAVYPAAKQ  165 (256)
T ss_pred             CCCCccHhHHHHH
Confidence            9999999998885

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3e-27  Score=175.93  Aligned_cols=151  Identities=24%  Similarity=0.278  Sum_probs=125.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEe-eChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhh----c
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTA-RDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQ----F   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~----~   75 (174)
                      +++||||++|||.+++++|+++|++|++.. ++.+...+...++...+ .+...+.+|+++.++++.+++++.+.    +
T Consensus         6 ~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK12747          6 VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG-GSAFSIGANLESLHGVEALYSSLDNELQNRT   84 (252)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcC-CceEEEecccCCHHHHHHHHHHHHHHhhhhc
Confidence            589999999999999999999999998875 45555556666666544 34778899999999999999888763    3


Q ss_pred             C--CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEE
Q 035504           76 G--KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNV  153 (174)
Q Consensus        76 g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~i  153 (174)
                      +  ++|++|||||....                   ....+.+.++|++++++|+.++++++++++|.|++.  |+||++
T Consensus        85 g~~~id~lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~iv~i  143 (252)
T PRK12747         85 GSTKFDILINNAGIGPG-------------------AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--SRIINI  143 (252)
T ss_pred             CCCCCCEEEECCCcCCC-------------------CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--CeEEEE
Confidence            4  89999999997422                   123455778899999999999999999999999753  899999


Q ss_pred             ecCCCcccCCCCcceeeecc
Q 035504          154 SSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       154 sS~~~~~~~~~~~~y~~~k~  173 (174)
                      ||..+..+.++...|+.+|+
T Consensus       144 sS~~~~~~~~~~~~Y~~sKa  163 (252)
T PRK12747        144 SSAATRISLPDFIAYSMTKG  163 (252)
T ss_pred             CCcccccCCCCchhHHHHHH
Confidence            99999999899999999985

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.95  E-value=1.8e-27  Score=175.52  Aligned_cols=148  Identities=16%  Similarity=0.188  Sum_probs=125.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.++..   +++...   ++.++.+|++|+++++++++++.++++++|+
T Consensus         4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA---GAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc---CCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            5899999999999999999999999999999865432   223222   2678899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC--CCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD--LPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~isS~~~  158 (174)
                      +|||||.....                   ...+.+.+++++++++|+.+++.+++.++|.|++++  .|+||++||..+
T Consensus        78 lv~~ag~~~~~-------------------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~  138 (236)
T PRK06483         78 IIHNASDWLAE-------------------KPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV  138 (236)
T ss_pred             EEECCccccCC-------------------CcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh
Confidence            99999974321                   123456788999999999999999999999998765  689999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       139 ~~~~~~~~~Y~asKa  153 (236)
T PRK06483        139 EKGSDKHIAYAASKA  153 (236)
T ss_pred             ccCCCCCccHHHHHH
Confidence            888888899999985

>PRK05717 oxidoreductase; Validated

Probab=99.95  E-value=2.6e-27  Score=176.59  Aligned_cols=151  Identities=30%  Similarity=0.340  Sum_probs=128.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.++|++|+++|++|++++|+.+...+..+++    +.++.++++|++|.+++.++++++.+++|++|+
T Consensus        12 ~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717         12 VALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----GENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----CCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4899999999999999999999999999998866555443333    235888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||...+..                 .+..+.+.+++++.+++|+.+++++++++.|+|++.. |+||++||..+..
T Consensus        88 li~~ag~~~~~~-----------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~ii~~sS~~~~~  149 (255)
T PRK05717         88 LVCNAAIADPHN-----------------TTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN-GAIVNLASTRARQ  149 (255)
T ss_pred             EEECCCcccCCC-----------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-cEEEEEcchhhcC
Confidence            999999753210                 1234567788999999999999999999999997654 8999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+.+|+
T Consensus       150 ~~~~~~~Y~~sKa  162 (255)
T PRK05717        150 SEPDTEAYAASKG  162 (255)
T ss_pred             CCCCCcchHHHHH
Confidence            9899999999985

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-27  Score=178.37  Aligned_cols=150  Identities=22%  Similarity=0.239  Sum_probs=125.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.+.++++|+
T Consensus         8 ~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          8 VALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----GDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4899999999999999999999999999999876655544443    345888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCH----HHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTY----ELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      +|||||+.....                  ++.+.+.    +.|++++++|+.+++.+++.++|.|++++ |+||++||.
T Consensus        84 li~~ag~~~~~~------------------~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~~sS~  144 (263)
T PRK06200         84 FVGNAGIWDYNT------------------SLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-GSMIFTLSN  144 (263)
T ss_pred             EEECCCCcccCC------------------CcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-CEEEEECCh
Confidence            999999743211                  1112222    33788899999999999999999997665 899999999


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      .+..+.++...|+.+|+
T Consensus       145 ~~~~~~~~~~~Y~~sK~  161 (263)
T PRK06200        145 SSFYPGGGGPLYTASKH  161 (263)
T ss_pred             hhcCCCCCCchhHHHHH
Confidence            99998888899999985

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.95  E-value=2.4e-27  Score=176.70  Aligned_cols=151  Identities=21%  Similarity=0.210  Sum_probs=127.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|||+++|||.+++++|+++|++|++++++..  .+..+++...+ .++..+++|++|+++++++++++.++++++|+
T Consensus        12 ~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993         12 VAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALG-RRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5899999999999999999999999998877532  33444454433 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||||.....                   ...+.+.+++++.+++|+.+++.++++++|.|.+++ .|+||++||..+.
T Consensus        89 li~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  149 (253)
T PRK08993         89 LVNNAGLIRRE-------------------DAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSF  149 (253)
T ss_pred             EEECCCCCCCC-------------------CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhc
Confidence            99999974321                   234567788999999999999999999999997764 5899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+.+|+
T Consensus       150 ~~~~~~~~Y~~sKa  163 (253)
T PRK08993        150 QGGIRVPSYTASKS  163 (253)
T ss_pred             cCCCCCcchHHHHH
Confidence            88888899999985

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3e-27  Score=178.08  Aligned_cols=153  Identities=22%  Similarity=0.295  Sum_probs=129.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-------HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-------GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+.       ..+..+++...+ .++.++.+|+++.+++.++++++.+
T Consensus         8 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~   86 (273)
T PRK08278          8 TLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAG-GQALPLVGDVRDEDQVAAAVAKAVE   86 (273)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999997542       233445555443 4588999999999999999999999


Q ss_pred             hcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEE
Q 035504           74 QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNV  153 (174)
Q Consensus        74 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~i  153 (174)
                      .++++|++|||||...+.                   +..+.+.+++++++++|+.+++.++++++|.|++++.|+|+++
T Consensus        87 ~~g~id~li~~ag~~~~~-------------------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~i  147 (273)
T PRK08278         87 RFGGIDICVNNASAINLT-------------------GTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTL  147 (273)
T ss_pred             HhCCCCEEEECCCCcCCC-------------------CcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            999999999999974321                   2234577889999999999999999999999988877999999


Q ss_pred             ecCCCcccC--CCCcceeeecc
Q 035504          154 SSNMGKLKN--TWQGAICYLTF  173 (174)
Q Consensus       154 sS~~~~~~~--~~~~~y~~~k~  173 (174)
                      ||..+..+.  ++...|+.+|+
T Consensus       148 ss~~~~~~~~~~~~~~Y~~sK~  169 (273)
T PRK08278        148 SPPLNLDPKWFAPHTAYTMAKY  169 (273)
T ss_pred             CCchhccccccCCcchhHHHHH
Confidence            999887776  77889999985

>PRK06182 short chain dehydrogenase; Validated

Probab=99.95  E-value=2.4e-27  Score=178.47  Aligned_cols=147  Identities=31%  Similarity=0.400  Sum_probs=127.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++++|+++|++|++++|+.+...+..    .   .++.++.+|++|+++++++++++.+.++++|+
T Consensus         5 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          5 VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S---LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4899999999999999999999999999999876543322    1   23788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   ++.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..
T Consensus        78 li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~  138 (273)
T PRK06182         78 LVNNAGYGSYG-------------------AIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI  138 (273)
T ss_pred             EEECCCcCCCC-------------------chhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC
Confidence            99999985321                   23456778899999999999999999999999888889999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|....|+.+|+
T Consensus       139 ~~~~~~~Y~~sKa  151 (273)
T PRK06182        139 YTPLGAWYHATKF  151 (273)
T ss_pred             CCCCccHhHHHHH
Confidence            8888889999885

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.2e-27  Score=179.17  Aligned_cols=147  Identities=29%  Similarity=0.375  Sum_probs=127.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc-CCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF-GKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-g~id   79 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+...+.    ...   ++.++.+|++|+++++++++++.+.+ +++|
T Consensus         6 ~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l----~~~---~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993          6 SILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL----EAE---GLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHC---CceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            489999999999999999999999999999987654332    222   37788999999999999999997766 6899


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....                   ...+.+.++++.++++|+.|++.+++.++|.|++++.|+||++||..+.
T Consensus        79 ~li~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~  139 (277)
T PRK05993         79 ALFNNGAYGQPG-------------------AVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGL  139 (277)
T ss_pred             EEEECCCcCCCC-------------------CcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhc
Confidence            999999975431                   2344577889999999999999999999999998888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+..+.|+.+|+
T Consensus       140 ~~~~~~~~Y~asK~  153 (277)
T PRK05993        140 VPMKYRGAYNASKF  153 (277)
T ss_pred             CCCCccchHHHHHH
Confidence            99899999999986

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.3e-27  Score=176.09  Aligned_cols=154  Identities=27%  Similarity=0.303  Sum_probs=133.1

Q ss_pred             CEEEecCCC-chhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc-CCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANK-GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~-giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||++ |||+++++.|+++|++|++++|+.+..++..+++++. +..++.++++|++++++++++++++.+.+|++
T Consensus        19 ~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   98 (262)
T PRK07831         19 VVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRL   98 (262)
T ss_pred             EEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            589999984 9999999999999999999999877777776777653 32468889999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~  157 (174)
                      |++|||+|...+                   ..+.+.+.+++++.+++|+.+++++++.++|.|+++. .|+|+++||..
T Consensus        99 d~li~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~  159 (262)
T PRK07831         99 DVLVNNAGLGGQ-------------------TPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVL  159 (262)
T ss_pred             CEEEECCCCCCC-------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchh
Confidence            999999997432                   1234557788999999999999999999999998776 69999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.++...|+++|+
T Consensus       160 ~~~~~~~~~~Y~~sKa  175 (262)
T PRK07831        160 GWRAQHGQAHYAAAKA  175 (262)
T ss_pred             hcCCCCCCcchHHHHH
Confidence            9988888999999985

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.4e-27  Score=175.39  Aligned_cols=153  Identities=24%  Similarity=0.298  Sum_probs=132.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++++|+++|++|++++|+.+..++...++...+ .++.++.+|++|+++++++++++.++++++|+
T Consensus         7 ~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   85 (258)
T PRK07890          7 VVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLG-RRALAVPTDITDEDQCANLVALALERFGRVDA   85 (258)
T ss_pred             EEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhC-CceEEEecCCCCHHHHHHHHHHHHHHcCCccE
Confidence            58999999999999999999999999999998877666666665544 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                  ....+.+.+++++++++|+.+++.+++++.+.|++.+ ++||++||..+..
T Consensus        86 vi~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~  146 (258)
T PRK07890         86 LVNNAFRVPSM------------------KPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRH  146 (258)
T ss_pred             EEECCccCCCC------------------CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhcc
Confidence            99999874321                  1234557889999999999999999999999997765 7999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|.
T Consensus       147 ~~~~~~~Y~~sK~  159 (258)
T PRK07890        147 SQPKYGAYKMAKG  159 (258)
T ss_pred             CCCCcchhHHHHH
Confidence            8888999999885

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.8e-27  Score=176.58  Aligned_cols=153  Identities=27%  Similarity=0.339  Sum_probs=133.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+.+..++..+++...+ .++.++.+|+++++++.++++++.+.++++|+
T Consensus        12 ~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   90 (263)
T PRK07814         12 VAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAG-RRAHVVAADLAHPEATAGLAGQAVEAFGRLDI   90 (263)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999999777666666665543 45888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccC-CCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQL-SDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~iv~isS~~~~  159 (174)
                      +|||||....                   ....+.+.+++++++++|+.+++.+.+++.|.|.+ .+.|+||++||..+.
T Consensus        91 vi~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~  151 (263)
T PRK07814         91 VVNNVGGTMP-------------------NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR  151 (263)
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc
Confidence            9999987432                   12345577889999999999999999999999976 466899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       152 ~~~~~~~~Y~~sK~  165 (263)
T PRK07814        152 LAGRGFAAYGTAKA  165 (263)
T ss_pred             CCCCCCchhHHHHH
Confidence            99999999999985

>PRK06128 oxidoreductase; Provisional

Probab=99.95  E-value=3.9e-27  Score=179.69  Aligned_cols=152  Identities=26%  Similarity=0.285  Sum_probs=128.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh--HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK--RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||++++++|+++|++|++++++.+  ..++..+.++..+ .++.++.+|++|.++++++++++.+.++++
T Consensus        57 ~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  135 (300)
T PRK06128         57 KALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEG-RKAVALPGDLKDEAFCRQLVERAVKELGGL  135 (300)
T ss_pred             EEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHHHHHHhCCC
Confidence            4899999999999999999999999999887543  2334445555443 458889999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||.....                  ..+.+.+.+++++++++|+.++++++++++|+|++  .++||++||..+
T Consensus       136 D~lV~nAg~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~  195 (300)
T PRK06128        136 DILVNIAGKQTAV------------------KDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQS  195 (300)
T ss_pred             CEEEECCcccCCC------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccc
Confidence            9999999974321                  12445678889999999999999999999999974  379999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       196 ~~~~~~~~~Y~asK~  210 (300)
T PRK06128        196 YQPSPTLLDYASTKA  210 (300)
T ss_pred             cCCCCCchhHHHHHH
Confidence            998888899999885

>PRK07985 oxidoreductase; Provisional

Probab=99.95  E-value=3.5e-27  Score=179.53  Aligned_cols=152  Identities=20%  Similarity=0.166  Sum_probs=126.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh--HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK--RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||.+++++|+++|++|++++|+..  ..++..+.+... +.++.++.+|++|++++.++++++.+.++++
T Consensus        51 ~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  129 (294)
T PRK07985         51 KALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC-GRKAVLLPGDLSDEKFARSLVHEAHKALGGL  129 (294)
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc-CCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4899999999999999999999999999887532  233333333333 3458889999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||.....                  .+..+.+.+++++++++|+.+++.++++++|+|++  .|+||++||..+
T Consensus       130 d~lv~~Ag~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~  189 (294)
T PRK07985        130 DIMALVAGKQVAI------------------PDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQA  189 (294)
T ss_pred             CEEEECCCCCcCC------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchh
Confidence            9999999963211                  12345678899999999999999999999999964  389999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       190 ~~~~~~~~~Y~asKa  204 (294)
T PRK07985        190 YQPSPHLLDYAATKA  204 (294)
T ss_pred             ccCCCCcchhHHHHH
Confidence            988889999999985

>PRK06484 short chain dehydrogenase; Validated

Probab=99.95  E-value=2.3e-27  Score=193.05  Aligned_cols=149  Identities=26%  Similarity=0.308  Sum_probs=129.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++    +.+...+.+|++|+++++++++++.+++|++|+
T Consensus       271 ~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        271 VVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----GDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4799999999999999999999999999999877666555444    234778899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                  .+..+.+.++|++++++|+.+++++++.++|+|+  +.|+||++||.++..
T Consensus       347 li~nAg~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~  406 (520)
T PRK06484        347 LVNNAGIAEVF------------------KPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--QGGVIVNLGSIASLL  406 (520)
T ss_pred             EEECCCCcCCC------------------CChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cCCEEEEECchhhcC
Confidence            99999974321                  1234567889999999999999999999999993  348999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       407 ~~~~~~~Y~asKa  419 (520)
T PRK06484        407 ALPPRNAYCASKA  419 (520)
T ss_pred             CCCCCchhHHHHH
Confidence            9999999999986

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.95  E-value=4.9e-27  Score=175.14  Aligned_cols=152  Identities=24%  Similarity=0.314  Sum_probs=132.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|+++++++|+.+..++...+++..+ .++.++.+|++|.+++.++++++.+.++++|+
T Consensus        13 ~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   91 (255)
T PRK06113         13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-GQAFACRCDITSEQELSALADFALSKLGKVDI   91 (255)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999998777666666665543 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|...+.                   . .+.+.+++++.+++|+.+++++++.++|+|.+.+.|+||++||..+..
T Consensus        92 li~~ag~~~~~-------------------~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~  151 (255)
T PRK06113         92 LVNNAGGGGPK-------------------P-FDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN  151 (255)
T ss_pred             EEECCCCCCCC-------------------C-CCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC
Confidence            99999974321                   1 135678888999999999999999999999877778999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       152 ~~~~~~~Y~~sK~  164 (255)
T PRK06113        152 KNINMTSYASSKA  164 (255)
T ss_pred             CCCCcchhHHHHH
Confidence            8888899999885

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4e-27  Score=179.12  Aligned_cols=155  Identities=24%  Similarity=0.259  Sum_probs=129.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.++|++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|++++.++++++.+.++++|+
T Consensus        42 ~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~  120 (293)
T PRK05866         42 RILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAG-GDAMAVPCDLSDLDAVDALVADVEKRIGGVDI  120 (293)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999877777777776544 34888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....+                +.. ...+.++++..+++|+.|++.++++++|.|++.+.|+||++||..+..
T Consensus       121 li~~AG~~~~~~----------------~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  183 (293)
T PRK05866        121 LINNAGRSIRRP----------------LAE-SLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLS  183 (293)
T ss_pred             EEECCCCCCCcc----------------hhh-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC
Confidence            999999854211                000 011346778889999999999999999999888889999999976654


Q ss_pred             -cCCCCcceeeecc
Q 035504          161 -KNTWQGAICYLTF  173 (174)
Q Consensus       161 -~~~~~~~y~~~k~  173 (174)
                       +.|+...|+++|+
T Consensus       184 ~~~p~~~~Y~asKa  197 (293)
T PRK05866        184 EASPLFSVYNASKA  197 (293)
T ss_pred             CCCCCcchHHHHHH
Confidence             3577788999885

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=2.8e-27  Score=180.96  Aligned_cols=152  Identities=24%  Similarity=0.248  Sum_probs=129.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||+++|++|+++|++|++.+++. +..++..+++...+ .++.++.+|++|+++++++++++.+ +|++|
T Consensus        14 ~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g-~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~iD   91 (306)
T PRK07792         14 VAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAG-AKAVAVAGDISQRATADELVATAVG-LGGLD   91 (306)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcC-CeEEEEeCCCCCHHHHHHHHHHHHH-hCCCC
Confidence            589999999999999999999999999998753 34556666676544 4588999999999999999999999 99999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC-------CCCeEEE
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS-------DLPRIVN  152 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-------~~g~iv~  152 (174)
                      ++|||||.....                   .+.+.+.+++++++++|+.+++++++++.|+|+++       ..|+||+
T Consensus        92 ~li~nAG~~~~~-------------------~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~  152 (306)
T PRK07792         92 IVVNNAGITRDR-------------------MLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVN  152 (306)
T ss_pred             EEEECCCCCCCC-------------------CcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEE
Confidence            999999985321                   23455778889999999999999999999998643       2479999


Q ss_pred             EecCCCcccCCCCcceeeecc
Q 035504          153 VSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       153 isS~~~~~~~~~~~~y~~~k~  173 (174)
                      +||..+..+.+++..|+++|+
T Consensus       153 isS~~~~~~~~~~~~Y~asKa  173 (306)
T PRK07792        153 TSSEAGLVGPVGQANYGAAKA  173 (306)
T ss_pred             ECCcccccCCCCCchHHHHHH
Confidence            999999999899999999985

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.95  E-value=5.9e-27  Score=175.04  Aligned_cols=151  Identities=25%  Similarity=0.253  Sum_probs=125.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+. ...+..+++...+ .++.++.+|++|.++++++++++.+.++++|+
T Consensus        10 ~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (260)
T PRK12823         10 VVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAG-GEALALTADLETYAGAQAAMAAAVEAFGRIDV   87 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcC-CeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeE
Confidence            489999999999999999999999999999974 3445555565444 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                  .+..+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..
T Consensus        88 lv~nAg~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  149 (260)
T PRK12823         88 LINNVGGTIWA------------------KPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG  149 (260)
T ss_pred             EEECCccccCC------------------CChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC
Confidence            99999863211                  123455778889999999999999999999999888779999999987642


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                        +....|+.+|+
T Consensus       150 --~~~~~Y~~sK~  160 (260)
T PRK12823        150 --INRVPYSAAKG  160 (260)
T ss_pred             --CCCCccHHHHH
Confidence              44578998885

>PRK06484 short chain dehydrogenase; Validated

Probab=99.95  E-value=3.5e-27  Score=192.01  Aligned_cols=152  Identities=26%  Similarity=0.300  Sum_probs=131.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.++|++|+++|++|++++|+.+..++..+++    +.++.++++|++|+++++++++++.++++++|+
T Consensus         7 ~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          7 VVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----GPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            5899999999999999999999999999999877666655544    235778999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCC-eEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP-RIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~iv~isS~~~~  159 (174)
                      +|||||...+.                 ..++.+.+.+++++++++|+.+++.++++++|+|++++.| +||++||..+.
T Consensus        83 li~nag~~~~~-----------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~  145 (520)
T PRK06484         83 LVNNAGVTDPT-----------------MTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGL  145 (520)
T ss_pred             EEECCCcCCCC-----------------CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccC
Confidence            99999974321                 1223456778899999999999999999999999776655 99999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       146 ~~~~~~~~Y~asKa  159 (520)
T PRK06484        146 VALPKRTAYSASKA  159 (520)
T ss_pred             CCCCCCchHHHHHH
Confidence            99999999999985

>TIGR02415 23BDH acetoin reductases

Probab=99.95  E-value=7.6e-27  Score=173.74  Aligned_cols=153  Identities=26%  Similarity=0.353  Sum_probs=133.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|||++++||.+++++|+++|++|++++|+.+...+..+++...+ .++.++.+|++|++++.++++++.++++++|+
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAG-GKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999998776667667676543 45889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||+|....                   .+..+.+.+++++.+++|+.+++.+++.+++.|++.+ .++||++||..+.
T Consensus        81 vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  141 (254)
T TIGR02415        81 MVNNAGVAPI-------------------TPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGH  141 (254)
T ss_pred             EEECCCcCCC-------------------CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhc
Confidence            9999997432                   1234567788999999999999999999999998765 4899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+..+.|+++|+
T Consensus       142 ~~~~~~~~Y~~sK~  155 (254)
T TIGR02415       142 EGNPILSAYSSTKF  155 (254)
T ss_pred             CCCCCCcchHHHHH
Confidence            99999999999985

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.95  E-value=6.5e-27  Score=175.65  Aligned_cols=165  Identities=22%  Similarity=0.169  Sum_probs=126.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-hhHHHHHHHHHhhcCCCceeEEEeecCChhhH----HHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVADPATI----HSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i----~~~~~~~~~~~   75 (174)
                      +++||||++|||++++++|+++|++|++++|+ .+...+..+++....+.++.++.+|++|++++    +++++++.+.+
T Consensus         3 ~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~   82 (267)
T TIGR02685         3 AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF   82 (267)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence            58999999999999999999999999988764 44555566666544444577899999999866    55666666788


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC------CCCe
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS------DLPR  149 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~  149 (174)
                      +++|+||||||...+.+        +.+.+.++.....+...+++.+++++|+.+++.++++++|.|+..      ..++
T Consensus        83 g~iD~lv~nAG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~  154 (267)
T TIGR02685        83 GRCDVLVNNASAFYPTP--------LLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLS  154 (267)
T ss_pred             CCceEEEECCccCCCCc--------ccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeE
Confidence            99999999999754321        111222222222233445688999999999999999999998643      2468


Q ss_pred             EEEEecCCCcccCCCCcceeeecc
Q 035504          150 IVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       150 iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      |++++|..+..+.++..+|+.+|+
T Consensus       155 iv~~~s~~~~~~~~~~~~Y~asK~  178 (267)
T TIGR02685       155 IVNLCDAMTDQPLLGFTMYTMAKH  178 (267)
T ss_pred             EEEehhhhccCCCcccchhHHHHH
Confidence            999999999888888999999996

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.5e-27  Score=174.88  Aligned_cols=151  Identities=23%  Similarity=0.222  Sum_probs=131.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhh-cCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQ-FGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~g~id   79 (174)
                      ++|||||++|||.+++++|+++|++|++++|+.+..++..+.+.   +.++.++.+|++|++++.+++.++.++ ++++|
T Consensus         3 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          3 SIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            48999999999999999999999999999998776666555443   346889999999999999999988877 88999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....                   ...+.+.+++++++++|+.+++++++++.++|++++.++||++||..+.
T Consensus        80 ~vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  140 (260)
T PRK08267         80 VLFNNAGILRGG-------------------PFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAI  140 (260)
T ss_pred             EEEECCCCCCCC-------------------ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhC
Confidence            999999985421                   2334577889999999999999999999999998888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|.
T Consensus       141 ~~~~~~~~Y~~sKa  154 (260)
T PRK08267        141 YGQPGLAVYSATKF  154 (260)
T ss_pred             cCCCCchhhHHHHH
Confidence            99899999998885

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.8e-27  Score=175.37  Aligned_cols=152  Identities=21%  Similarity=0.273  Sum_probs=131.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+...+..+++...+ .++.++.+|++|+++++++++++.+.++++|+
T Consensus        11 ~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~   89 (264)
T PRK07576         11 NVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG-PEGLGVSADVRDYAAVEAAFAQIADEFGPIDV   89 (264)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-CceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999998776666666666544 34788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   ..+.+.+.+++++.+++|+.+++.++++++|.|++++ |+|+++||..+..
T Consensus        90 vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g~iv~iss~~~~~  149 (264)
T PRK07576         90 LVSGAAGNFP-------------------APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFV  149 (264)
T ss_pred             EEECCCCCCC-------------------CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CEEEEECChhhcc
Confidence            9999986321                   1234557788899999999999999999999997664 8999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       150 ~~~~~~~Y~asK~  162 (264)
T PRK07576        150 PMPMQAHVCAAKA  162 (264)
T ss_pred             CCCCccHHHHHHH
Confidence            8889999998885

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.2e-27  Score=177.43  Aligned_cols=145  Identities=31%  Similarity=0.422  Sum_probs=127.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++++|+++|++|++++|+.+....         ..++.++++|++|+++++++++++.+.+|++|+
T Consensus         6 ~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179          6 VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            48999999999999999999999999999998653221         124788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   ...+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..
T Consensus        77 li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  137 (270)
T PRK06179         77 LVNNAGVGLAG-------------------AAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL  137 (270)
T ss_pred             EEECCCCCCCc-------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC
Confidence            99999985421                   23345778889999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|..+.|+++|+
T Consensus       138 ~~~~~~~Y~~sK~  150 (270)
T PRK06179        138 PAPYMALYAASKH  150 (270)
T ss_pred             CCCCccHHHHHHH
Confidence            9999999999885

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.7e-27  Score=173.79  Aligned_cols=152  Identities=28%  Similarity=0.332  Sum_probs=132.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+++||.+++++|+++|++|++++|+.+...+...++.  .+.++.++.+|++|+++++++++++.++++++|+
T Consensus         7 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   84 (252)
T PRK06138          7 VAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--AGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV   84 (252)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999776666555554  2345889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                   ...+.+.+++++.+++|+.+++.+++.++|.|++++.++|+++||..+..
T Consensus        85 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~  145 (252)
T PRK06138         85 LVNNAGFGCGG-------------------TVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALA  145 (252)
T ss_pred             EEECCCCCCCC-------------------CcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhcc
Confidence            99999974321                   23455678889999999999999999999999888889999999999998


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++.+.|+.+|+
T Consensus       146 ~~~~~~~Y~~sK~  158 (252)
T PRK06138        146 GGRGRAAYVASKG  158 (252)
T ss_pred             CCCCccHHHHHHH
Confidence            8888999999885

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=6.8e-27  Score=173.64  Aligned_cols=153  Identities=22%  Similarity=0.210  Sum_probs=131.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEE-EeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||++++++|+++|++|++ ..|+.+..++..++++..+ .++.++.+|++|++++.++++++.+.++++|
T Consensus         6 ~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (250)
T PRK08063          6 VALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALG-RKALAVKANVGDVEKIKEMFAQIDEEFGRLD   84 (250)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999876 4677666666666666554 3588899999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||+|....                   .+..+.+.+++...+++|+.+++.++++++|+|++++.|+||++||..+.
T Consensus        85 ~vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  145 (250)
T PRK08063         85 VFVNNAASGVL-------------------RPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI  145 (250)
T ss_pred             EEEECCCCCCC-------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc
Confidence            99999987432                   12345577888899999999999999999999988888999999999888


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+.+|+
T Consensus       146 ~~~~~~~~y~~sK~  159 (250)
T PRK08063        146 RYLENYTTVGVSKA  159 (250)
T ss_pred             cCCCCccHHHHHHH
Confidence            88788889998885

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.95  E-value=6.4e-27  Score=174.71  Aligned_cols=156  Identities=21%  Similarity=0.197  Sum_probs=129.6

Q ss_pred             CEEEecCCCchhHHHHHHHHH----CCCeEEEEeeChhHHHHHHHHHhhc-CCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLAS----NGIIVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      +++||||++|||+++|++|++    +|++|++++|+.+..++..+++... .+.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999997    7999999999988777777777653 23358889999999999999999998887


Q ss_pred             CCc----cEEEecccccCccCCCCCccccccCCCCcccccccc-cCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC--CC
Q 035504           76 GKL----DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT-PTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD--LP  148 (174)
Q Consensus        76 g~i----d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g  148 (174)
                      +.+    |++|||||.......                 ...+ .+.+++++.|++|+.+++++++.++|.|++++  .|
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~-----------------~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~  144 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSK-----------------GFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNR  144 (256)
T ss_pred             ccCCCceEEEEeCCcccCcccc-----------------ccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCC
Confidence            753    699999997432110                 0111 24578899999999999999999999998653  47


Q ss_pred             eEEEEecCCCcccCCCCcceeeecc
Q 035504          149 RIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       149 ~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      +||++||..+..+.++...|+.+|+
T Consensus       145 ~iv~isS~~~~~~~~~~~~Y~asKa  169 (256)
T TIGR01500       145 TVVNISSLCAIQPFKGWALYCAGKA  169 (256)
T ss_pred             EEEEECCHHhCCCCCCchHHHHHHH
Confidence            9999999999999899999999986

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.2e-26  Score=172.25  Aligned_cols=154  Identities=23%  Similarity=0.216  Sum_probs=131.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+...+..+++.... +.++.++.+|++|+++++++++++.+.++++|
T Consensus         4 ~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (248)
T PRK08251          4 KILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLD   83 (248)
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999999999877776666665543 34688999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||+..+.                   ...+.+.+.+++.+++|+.+++.+++.++|+|++.+.++||++||..+.
T Consensus        84 ~vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  144 (248)
T PRK08251         84 RVIVNAGIGKGA-------------------RLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAV  144 (248)
T ss_pred             EEEECCCcCCCC-------------------CcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccc
Confidence            999999985432                   1123355677888999999999999999999988888999999999998


Q ss_pred             ccCCC-Ccceeeecc
Q 035504          160 LKNTW-QGAICYLTF  173 (174)
Q Consensus       160 ~~~~~-~~~y~~~k~  173 (174)
                      .+.|. ...|+.+|+
T Consensus       145 ~~~~~~~~~Y~~sK~  159 (248)
T PRK08251        145 RGLPGVKAAYAASKA  159 (248)
T ss_pred             cCCCCCcccHHHHHH
Confidence            88775 578998885

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=5.3e-27  Score=174.94  Aligned_cols=148  Identities=25%  Similarity=0.338  Sum_probs=123.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.++|++|+++|++|++++++.+..   .+++...   ++.++.+|++|+++++++++++.+.++++|+
T Consensus         9 ~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          9 VALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK---GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC---CCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            489999999999999999999999999887764432   2233322   3788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   +..+.+.+++++++++|+.+++++++.++|.|++++.|+||++||..+..
T Consensus        83 li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~  143 (255)
T PRK06463         83 LVNNAGIMYLM-------------------PFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIG  143 (255)
T ss_pred             EEECCCcCCCC-------------------ChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCC
Confidence            99999984321                   22345778899999999999999999999999877779999999998875


Q ss_pred             -cCCCCcceeeecc
Q 035504          161 -KNTWQGAICYLTF  173 (174)
Q Consensus       161 -~~~~~~~y~~~k~  173 (174)
                       +.++...|+.+|+
T Consensus       144 ~~~~~~~~Y~asKa  157 (255)
T PRK06463        144 TAAEGTTFYAITKA  157 (255)
T ss_pred             CCCCCccHhHHHHH
Confidence             4467788999885

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.9e-27  Score=176.60  Aligned_cols=150  Identities=28%  Similarity=0.317  Sum_probs=130.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++++|+++|++|++++|+.+...+..+.+    +.++..+++|++|+++++++++++.+.++++|+
T Consensus         5 ~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          5 VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----GDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999876554443322    235788899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   ...+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..
T Consensus        81 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~  141 (275)
T PRK08263         81 VVNNAGYGLFG-------------------MIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGIS  141 (275)
T ss_pred             EEECCCCcccc-------------------ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcC
Confidence            99999985321                   23455778899999999999999999999999888889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+.+|+
T Consensus       142 ~~~~~~~Y~~sKa  154 (275)
T PRK08263        142 AFPMSGIYHASKW  154 (275)
T ss_pred             CCCCccHHHHHHH
Confidence            9999999999986

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.95  E-value=4.8e-27  Score=175.90  Aligned_cols=154  Identities=21%  Similarity=0.193  Sum_probs=125.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++++|+++|++|++++|+.+..++..+    ..+.++..+.+|++|.++++++++++.++++++|+
T Consensus         7 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         7 VVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA----AHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----hcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            58999999999999999999999999999998765444332    22345888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||......+       +.+.+       .+...++|++++++|+.+++.++++++|.|.+++ |+||++||..+..
T Consensus        83 li~~Ag~~~~~~~-------~~~~~-------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~  147 (262)
T TIGR03325        83 LIPNAGIWDYSTA-------LVDIP-------DDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFY  147 (262)
T ss_pred             EEECCCCCccCCc-------cccCC-------chhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceec
Confidence            9999997432110       11111       1112356888999999999999999999997665 8999999999998


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       148 ~~~~~~~Y~~sKa  160 (262)
T TIGR03325       148 PNGGGPLYTAAKH  160 (262)
T ss_pred             CCCCCchhHHHHH
Confidence            8888889999985

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.95  E-value=1.2e-26  Score=173.52  Aligned_cols=153  Identities=22%  Similarity=0.244  Sum_probs=130.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh-HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK-RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||.++|++|+++|++|++++|+.+ ...+..+++...+ .++.++.+|++|.+++.++++++.+.++++|
T Consensus         9 ~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   87 (261)
T PRK08936          9 VVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAG-GEAIAVKGDVTVESDVVNLIQTAVKEFGTLD   87 (261)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999888543 3445556665543 4588899999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~  158 (174)
                      ++|||||.....                   +..+.+.+++++.+++|+.+++.+++.++|+|++++ .|+||++||..+
T Consensus        88 ~lv~~ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~  148 (261)
T PRK08936         88 VMINNAGIENAV-------------------PSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHE  148 (261)
T ss_pred             EEEECCCCCCCC-------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccc
Confidence            999999974321                   233457788999999999999999999999998764 589999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       149 ~~~~~~~~~Y~~sKa  163 (261)
T PRK08936        149 QIPWPLFVHYAASKG  163 (261)
T ss_pred             cCCCCCCcccHHHHH
Confidence            888899999999984

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.95  E-value=7.7e-27  Score=172.62  Aligned_cols=153  Identities=24%  Similarity=0.287  Sum_probs=133.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||..++++|+++|++|++++|+.+...+..+++.+.+ .++.++.+|++|++++.++++++.++++++|+
T Consensus         8 ~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (241)
T PRK07454          8 RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTG-VKAAAYSIDLSNPEAIAPGIAELLEQFGCPDV   86 (241)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999877666666665544 45889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|....                   .+..+.+.+++++++++|+.+++++++.++|+|.+++.++||++||..+..
T Consensus        87 lv~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  147 (241)
T PRK07454         87 LINNAGMAYT-------------------GPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN  147 (241)
T ss_pred             EEECCCccCC-------------------CchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc
Confidence            9999997432                   123345678889999999999999999999999888779999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       148 ~~~~~~~Y~~sK~  160 (241)
T PRK07454        148 AFPQWGAYCVSKA  160 (241)
T ss_pred             CCCCccHHHHHHH
Confidence            8888889988875

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=1e-26  Score=173.77  Aligned_cols=151  Identities=22%  Similarity=0.254  Sum_probs=120.5

Q ss_pred             CEEEecC--CCchhHHHHHHHHHCCCeEEEEeeCh--hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGA--NKGIGYETVRQLASNGIIVVLTARDE--KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa--~~giG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +++||||  ++|||+++|++|+++|++|++++|+.  +..++..+++    +.++.++++|++|+++++++++++.+++|
T Consensus         9 ~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   84 (256)
T PRK07889          9 RILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL----PEPAPVLELDVTNEEHLASLADRVREHVD   84 (256)
T ss_pred             EEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc----CCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5899999  89999999999999999999998764  2223333333    23577899999999999999999999999


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|++|||||+.....               ...++.+.+.+++++.+++|+.+++++++.++|+|++  .|+||++|+.
T Consensus        85 ~iD~li~nAG~~~~~~---------------~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~  147 (256)
T PRK07889         85 GLDGVVHSIGFAPQSA---------------LGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFD  147 (256)
T ss_pred             CCcEEEEccccccccc---------------cCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeec
Confidence            9999999999853210               0012345577889999999999999999999999974  3899999875


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                       +..+.|....|+.+|+
T Consensus       148 -~~~~~~~~~~Y~asKa  163 (256)
T PRK07889        148 -ATVAWPAYDWMGVAKA  163 (256)
T ss_pred             -ccccCCccchhHHHHH
Confidence             4455677788899985

>PRK12743 oxidoreductase; Provisional

Probab=99.95  E-value=1.5e-26  Score=172.59  Aligned_cols=153  Identities=22%  Similarity=0.250  Sum_probs=129.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||.+++++|+++|++|+++.++ .+..++..+++...+ .++.++.+|++|.++++++++++.++++++|
T Consensus         4 ~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12743          4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHG-VRAEIRQLDLSDLPEGAQALDKLIQRLGRID   82 (256)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999999988764 444555556665544 4588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~  158 (174)
                      ++|||+|.....                   ...+.+.+++++.+++|+.+++.+++++.++|.+++ .|+||++||..+
T Consensus        83 ~li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~  143 (256)
T PRK12743         83 VLVNNAGAMTKA-------------------PFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHE  143 (256)
T ss_pred             EEEECCCCCCCC-------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccc
Confidence            999999974321                   123457888999999999999999999999986653 589999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       144 ~~~~~~~~~Y~~sK~  158 (256)
T PRK12743        144 HTPLPGASAYTAAKH  158 (256)
T ss_pred             cCCCCCcchhHHHHH
Confidence            998888899998885

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.95  E-value=9.9e-27  Score=172.64  Aligned_cols=151  Identities=23%  Similarity=0.255  Sum_probs=127.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+..  .+..+.++..+ .++.++.+|+++++++.++++++.+.++++|+
T Consensus         7 ~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         7 VALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALG-RRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999998753  33344444433 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||||.....                   +..+.+.+++++++++|+.+++.++++++|.|.+++ .|+||++||..+.
T Consensus        84 li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  144 (248)
T TIGR01832        84 LVNNAGIIRRA-------------------DAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF  144 (248)
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc
Confidence            99999985321                   123456778889999999999999999999997665 6899999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+.+|+
T Consensus       145 ~~~~~~~~Y~~sKa  158 (248)
T TIGR01832       145 QGGIRVPSYTASKH  158 (248)
T ss_pred             cCCCCCchhHHHHH
Confidence            88888899999986

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07069 short chain dehydrogenase; Validated

Probab=99.95  E-value=1.8e-26  Score=171.32  Aligned_cols=154  Identities=23%  Similarity=0.208  Sum_probs=131.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-hhHHHHHHHHHhhcCCC-ceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFD-SVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      .++||||++|||.++++.|+++|++|++++|+ .+..++..+++....+. ....+++|++|.++++++++++.++++++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999997 55555565666544322 35568899999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||....                   ....+.+.+++++++++|+.+++.+++.++|.|++++.++||++||..+
T Consensus        81 d~vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~  141 (251)
T PRK07069         81 SVLVNNAGVGSF-------------------GAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAA  141 (251)
T ss_pred             cEEEECCCcCCC-------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhh
Confidence            999999997432                   1234557788999999999999999999999999887899999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       142 ~~~~~~~~~Y~~sK~  156 (251)
T PRK07069        142 FKAEPDYTAYNASKA  156 (251)
T ss_pred             ccCCCCCchhHHHHH
Confidence            998899999999885

>PRK09186 flagellin modification protein A; Provisional

Probab=99.95  E-value=1.8e-26  Score=171.95  Aligned_cols=157  Identities=18%  Similarity=0.169  Sum_probs=128.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc-CCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||+++|+.|+++|++|++++|+.+..++..+++... +...+.++.+|++|++++.++++++.+.++++|
T Consensus         6 ~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id   85 (256)
T PRK09186          6 TILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKID   85 (256)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCcc
Confidence            5899999999999999999999999999999987777777777543 333466779999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||......                .....+.+.++++..+++|+.+++.++++++|.|++++.++||++||..+.
T Consensus        86 ~vi~~A~~~~~~~----------------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  149 (256)
T PRK09186         86 GAVNCAYPRNKDY----------------GKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGV  149 (256)
T ss_pred             EEEECCccccccc----------------cCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhh
Confidence            9999997643110                012345678889999999999999999999999988888999999998876


Q ss_pred             ccCC----------CCcceeeecc
Q 035504          160 LKNT----------WQGAICYLTF  173 (174)
Q Consensus       160 ~~~~----------~~~~y~~~k~  173 (174)
                      .+..          ....|+.+|+
T Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~  173 (256)
T PRK09186        150 VAPKFEIYEGTSMTSPVEYAAIKA  173 (256)
T ss_pred             ccccchhccccccCCcchhHHHHH
Confidence            4321          1236888885

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.95  E-value=1.3e-26  Score=171.74  Aligned_cols=153  Identities=26%  Similarity=0.232  Sum_probs=129.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEe-eChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTA-RDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||++++++|+++|++|++.. ++.....+..+++...+ .++..+.+|++|+++++++++++.+.++++|
T Consensus         5 ~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (246)
T PRK12938          5 IAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALG-FDFIASEGNVGDWDSTKAAFDKVKAEVGEID   83 (246)
T ss_pred             EEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            489999999999999999999999988754 34444445555555443 3478889999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||....                   .+..+.+.+++++++++|+.+++.++++++|.|++++.|+||++||..+.
T Consensus        84 ~li~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  144 (246)
T PRK12938         84 VLVNNAGITRD-------------------VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ  144 (246)
T ss_pred             EEEECCCCCCC-------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc
Confidence            99999997432                   12345577889999999999999999999999988877899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       145 ~~~~~~~~y~~sK~  158 (246)
T PRK12938        145 KGQFGQTNYSTAKA  158 (246)
T ss_pred             CCCCCChhHHHHHH
Confidence            98888999998885

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-26  Score=172.11  Aligned_cols=153  Identities=30%  Similarity=0.377  Sum_probs=134.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+++||.+++++|+++|++|++++|+.+...+..+++...+ .++..+.+|++|+++++++++++.++++++|+
T Consensus         6 ~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   84 (258)
T PRK12429          6 VALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAG-GKAIGVAMDVTDEEAINAGIDYAVETFGGVDI   84 (258)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999877777666666544 45889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                   +..+.+.++++..+++|+.+++.+++.++|.|++++.++||++||..+..
T Consensus        85 vi~~a~~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~  145 (258)
T PRK12429         85 LVNNAGIQHVA-------------------PIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV  145 (258)
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc
Confidence            99999975431                   23445677888999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++.+.|+++|.
T Consensus       146 ~~~~~~~y~~~k~  158 (258)
T PRK12429        146 GSAGKAAYVSAKH  158 (258)
T ss_pred             CCCCcchhHHHHH
Confidence            9999999998875

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.4e-27  Score=179.85  Aligned_cols=152  Identities=30%  Similarity=0.402  Sum_probs=124.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||.++|++|+++|++|++++|+.+...+..+++.+.. +.++.++.+|++|.++++++++++.++++++|
T Consensus        18 ~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   97 (306)
T PRK06197         18 VAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRID   97 (306)
T ss_pred             EEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCC
Confidence            58999999999999999999999999999999877666666665432 34588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||...+.                     .+.+.+.++..|++|+.+++.+++.++|.|++.+.++||++||..+.
T Consensus        98 ~li~nAg~~~~~---------------------~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~  156 (306)
T PRK06197         98 LLINNAGVMYTP---------------------KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHR  156 (306)
T ss_pred             EEEECCccccCC---------------------CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHh
Confidence            999999985321                     01233445566999999999999999999988877899999998754


Q ss_pred             c-------------cCCCCcceeeecc
Q 035504          160 L-------------KNTWQGAICYLTF  173 (174)
Q Consensus       160 ~-------------~~~~~~~y~~~k~  173 (174)
                      .             +.++...|+.+|+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~Y~~SK~  183 (306)
T PRK06197        157 IRAAIHFDDLQWERRYNRVAAYGQSKL  183 (306)
T ss_pred             ccCCCCccccCcccCCCcHHHHHHHHH
Confidence            3             1234467888874

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-26  Score=172.61  Aligned_cols=150  Identities=24%  Similarity=0.244  Sum_probs=129.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|||+++|||++++++|+++|++|++++|+.+..++..+++....+.++.++.+|++|+++++++++    .++++|+
T Consensus         9 ~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~----~~g~id~   84 (259)
T PRK06125          9 RVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAA----EAGDIDI   84 (259)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH----HhCCCCE
Confidence            589999999999999999999999999999998777777777776655568899999999999988775    3589999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|....                   ..+.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        85 lv~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~  145 (259)
T PRK06125         85 LVNNAGAIPG-------------------GGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN  145 (259)
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC
Confidence            9999997422                   123456788999999999999999999999999888779999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+++|+
T Consensus       146 ~~~~~~~y~ask~  158 (259)
T PRK06125        146 PDADYICGSAGNA  158 (259)
T ss_pred             CCCCchHhHHHHH
Confidence            8777788888875

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.95  E-value=2.2e-26  Score=171.87  Aligned_cols=153  Identities=23%  Similarity=0.262  Sum_probs=132.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+++||.+++++|+++|++|++++|+++...+..++++..+ .++.++++|++|.++++++++++.+.++++|+
T Consensus         9 ~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   87 (262)
T PRK13394          9 TAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAG-GKAIGVAMDVTNEDAVNAGIDKVAERFGSVDI   87 (262)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcC-ceEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999877777777776544 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhc-cCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLL-QLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m-~~~~~g~iv~isS~~~~  159 (174)
                      +|||+|...+.                   ...+.+.+.++..+++|+.+++.+++.+++.| ++.+.++||++||..+.
T Consensus        88 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~  148 (262)
T PRK13394         88 LVSNAGIQIVN-------------------PIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSH  148 (262)
T ss_pred             EEECCccCCCC-------------------chhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhc
Confidence            99999985321                   12334567788899999999999999999999 77777999999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+++|.
T Consensus       149 ~~~~~~~~y~~sk~  162 (262)
T PRK13394        149 EASPLKSAYVTAKH  162 (262)
T ss_pred             CCCCCCcccHHHHH
Confidence            88888889998885

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.3e-26  Score=172.55  Aligned_cols=145  Identities=26%  Similarity=0.308  Sum_probs=125.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+.         ...+.++.++++|++|+++++++++++.+.++++|+
T Consensus         8 ~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856          8 VVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE---------TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh---------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998643         111235888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC-CCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS-DLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~isS~~~~  159 (174)
                      +|||||....                   ....+.+.+++++++++|+.+++.+++.+.|.|.++ +.|+||++||..+.
T Consensus        79 vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~  139 (252)
T PRK07856         79 LVNNAGGSPY-------------------ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR  139 (252)
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC
Confidence            9999997432                   123445678889999999999999999999999765 45899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       140 ~~~~~~~~Y~~sK~  153 (252)
T PRK07856        140 RPSPGTAAYGAAKA  153 (252)
T ss_pred             CCCCCCchhHHHHH
Confidence            99999999999985

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2e-26  Score=173.68  Aligned_cols=150  Identities=24%  Similarity=0.256  Sum_probs=128.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|+++.|+.+...+..+++    +.++.++++|++|.++++++++++.+.++++|+
T Consensus         4 ~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY----GDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999876544433322    245889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   ...+.+.+++++.+++|+.++++++++++|+|++++.++||++||..+..
T Consensus        80 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  140 (276)
T PRK06482         80 VVSNAGYGLFG-------------------AAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI  140 (276)
T ss_pred             EEECCCCCCCc-------------------ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc
Confidence            99999985432                   12344667888999999999999999999999888789999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+.+.|+.+|+
T Consensus       141 ~~~~~~~Y~~sK~  153 (276)
T PRK06482        141 AYPGFSLYHATKW  153 (276)
T ss_pred             CCCCCchhHHHHH
Confidence            8888999999885

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.94  E-value=2.2e-26  Score=171.76  Aligned_cols=150  Identities=23%  Similarity=0.323  Sum_probs=129.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.++|++|+++|++|++++|+.+...+..+++.    .++.++++|++|+++++++++++.+.++++|+
T Consensus         8 ~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          8 VALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG----PAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998776555554442    34888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||+|....                   .+..+.+.+++++.+++|+.+++.+++++++.|.+++ .|+||++||..+.
T Consensus        84 li~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~  144 (257)
T PRK07067         84 LFNNAALFDM-------------------APILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR  144 (257)
T ss_pred             EEECCCcCCC-------------------CCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC
Confidence            9999997432                   1233456788899999999999999999999986653 4899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       145 ~~~~~~~~Y~~sK~  158 (257)
T PRK07067        145 RGEALVSHYCATKA  158 (257)
T ss_pred             CCCCCCchhhhhHH
Confidence            99899999999985

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.94  E-value=2.7e-26  Score=170.55  Aligned_cols=151  Identities=25%  Similarity=0.285  Sum_probs=129.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.++++.|+++|++|++++|+.+...+..+.+    +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4799999999999999999999999999999876655544433    235888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                  .+..+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..
T Consensus        78 vi~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~  139 (248)
T PRK10538         78 LVNNAGLALGL------------------EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW  139 (248)
T ss_pred             EEECCCccCCC------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC
Confidence            99999974211                  123345778899999999999999999999999888889999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|.
T Consensus       140 ~~~~~~~Y~~sK~  152 (248)
T PRK10538        140 PYAGGNVYGATKA  152 (248)
T ss_pred             CCCCCchhHHHHH
Confidence            8888889998885

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.9e-26  Score=168.70  Aligned_cols=155  Identities=22%  Similarity=0.283  Sum_probs=132.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC--hhhHHHHHHHHHhhc-CC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD--PATIHSLADFVRSQF-GK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~~-g~   77 (174)
                      +++||||++|||.++++.|+++|++|++++|+.+..++..+++.+.+......+.+|+++  .+++.++++++.+.+ ++
T Consensus         8 ~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~   87 (239)
T PRK08703          8 TILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGK   87 (239)
T ss_pred             EEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCC
Confidence            479999999999999999999999999999998777777777765544457788999976  568899999999988 89


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|++|||||.....                  .+..+.+.+++.+.+++|+.+++.+++.++|.|.+.+.++|+++||..
T Consensus        88 id~vi~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~  149 (239)
T PRK08703         88 LDGIVHCAGYFYAL------------------SPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESH  149 (239)
T ss_pred             CCEEEEeccccccC------------------CCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence            99999999974321                  123456778899999999999999999999999888779999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.+....|+.+|+
T Consensus       150 ~~~~~~~~~~Y~~sKa  165 (239)
T PRK08703        150 GETPKAYWGGFGASKA  165 (239)
T ss_pred             cccCCCCccchHHhHH
Confidence            9999888899999985

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.94  E-value=1.2e-26  Score=174.01  Aligned_cols=153  Identities=24%  Similarity=0.232  Sum_probs=128.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++++.....          ..++.++.+|++|+++++++++++.+.++++|+
T Consensus        11 ~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (266)
T PRK06171         11 IIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG   80 (266)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999998764321          124788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||...+..        +.+  +....+..+.+.+++++.+++|+.+++++++++.|+|++++.|+||++||..+..
T Consensus        81 li~~Ag~~~~~~--------~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  150 (266)
T PRK06171         81 LVNNAGINIPRL--------LVD--EKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE  150 (266)
T ss_pred             EEECCcccCCcc--------ccc--cccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC
Confidence            999999753211        000  0011123456889999999999999999999999999888789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       151 ~~~~~~~Y~~sK~  163 (266)
T PRK06171        151 GSEGQSCYAATKA  163 (266)
T ss_pred             CCCCCchhHHHHH
Confidence            8889999999885

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.94  E-value=3e-26  Score=169.97  Aligned_cols=153  Identities=27%  Similarity=0.322  Sum_probs=129.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||.+++++|+++|++|++..++ .+..++..+++...+ .++.++.+|++|++++.++++++.+.++++|
T Consensus         8 ~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (247)
T PRK12935          8 VAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEG-HDVYAVQADVSKVEDANRLVEEAVNHFGKVD   86 (247)
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999999876553 444455556665544 3589999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....                   ...+.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+.
T Consensus        87 ~vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  147 (247)
T PRK12935         87 ILVNNAGITRDR-------------------TFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ  147 (247)
T ss_pred             EEEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhc
Confidence            999999974321                   1234567888999999999999999999999987777899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       148 ~~~~~~~~Y~~sK~  161 (247)
T PRK12935        148 AGGFGQTNYSAAKA  161 (247)
T ss_pred             CCCCCCcchHHHHH
Confidence            88888899999885

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=3.2e-26  Score=169.95  Aligned_cols=155  Identities=28%  Similarity=0.398  Sum_probs=134.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecC--ChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA--DPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~--~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++|||++++||.+++++|+++|++|++++|+.+...+..+++++.+..++.++.+|++  +++++.++++++.+.++++
T Consensus        14 ~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i   93 (247)
T PRK08945         14 IILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRL   93 (247)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999877777777777665556778888886  7899999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||.....                  .+..+.+.+.+++.+++|+.++++++++++|+|.+++.++||++||..+
T Consensus        94 d~vi~~Ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~  155 (247)
T PRK08945         94 DGVLHNAGLLGEL------------------GPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVG  155 (247)
T ss_pred             CEEEECCcccCCC------------------CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhh
Confidence            9999999874321                  1233456788889999999999999999999999888899999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       156 ~~~~~~~~~Y~~sK~  170 (247)
T PRK08945        156 RQGRANWGAYAVSKF  170 (247)
T ss_pred             cCCCCCCcccHHHHH
Confidence            998899999998885

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=2.8e-26  Score=170.26  Aligned_cols=153  Identities=25%  Similarity=0.268  Sum_probs=132.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+++||.+++++|+++|++|++++|+.+...+....+..  +.++.++.+|++|.++++++++++.++++++|+
T Consensus         7 ~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   84 (251)
T PRK07231          7 VAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADVEAAVAAALERFGSVDI   84 (251)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            589999999999999999999999999999998766666555544  345889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                  .+..+.+.+++++.+++|+.+++.+++.++++|++++.++||++||..+..
T Consensus        85 vi~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  146 (251)
T PRK07231         85 LVNNAGTTHRN------------------GPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR  146 (251)
T ss_pred             EEECCCCCCCC------------------CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC
Confidence            99999974321                  123345778899999999999999999999999888789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|.
T Consensus       147 ~~~~~~~y~~sk~  159 (251)
T PRK07231        147 PRPGLGWYNASKG  159 (251)
T ss_pred             CCCCchHHHHHHH
Confidence            8888899988874

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.2e-26  Score=172.01  Aligned_cols=146  Identities=27%  Similarity=0.234  Sum_probs=124.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+.+..          ...++.++++|++|+++++++++++.++++++|+
T Consensus        11 ~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523         11 RALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             EEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            489999999999999999999999999999985421          1235888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                 ...+.+.+.+++++.+++|+.+++.+++.++|+|++++.|+||++||..+..
T Consensus        81 vi~~ag~~~~~-----------------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~  143 (260)
T PRK06523         81 LVHVLGGSSAP-----------------AGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRL  143 (260)
T ss_pred             EEECCcccccC-----------------CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccC
Confidence            99999974321                 1123455778899999999999999999999999888779999999999988


Q ss_pred             cCC-CCcceeeecc
Q 035504          161 KNT-WQGAICYLTF  173 (174)
Q Consensus       161 ~~~-~~~~y~~~k~  173 (174)
                      +.+ ....|+.+|.
T Consensus       144 ~~~~~~~~Y~~sK~  157 (260)
T PRK06523        144 PLPESTTAYAAAKA  157 (260)
T ss_pred             CCCCCcchhHHHHH
Confidence            755 7788998885

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.6e-26  Score=171.07  Aligned_cols=152  Identities=24%  Similarity=0.296  Sum_probs=128.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++++|+++|++|++++|+.. ..+..+++...+ .++.++++|++++++++++++++.++++++|+
T Consensus         8 ~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   85 (263)
T PRK08226          8 TALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRG-HRCTAVVADVRDPASVAAAIKRAKEKEGRIDI   85 (263)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhC-CceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999999864 444445554433 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc-
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK-  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~-  159 (174)
                      +|||||.....                   +..+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+. 
T Consensus        86 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  146 (263)
T PRK08226         86 LVNNAGVCRLG-------------------SFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM  146 (263)
T ss_pred             EEECCCcCCCC-------------------CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc
Confidence            99999974321                   2344567888999999999999999999999987777899999998884 


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|.
T Consensus       147 ~~~~~~~~Y~~sK~  160 (263)
T PRK08226        147 VADPGETAYALTKA  160 (263)
T ss_pred             cCCCCcchHHHHHH
Confidence            56677888988885

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.6e-26  Score=169.58  Aligned_cols=153  Identities=27%  Similarity=0.300  Sum_probs=133.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+...+..++++..+ .++.++.+|++|+++++++++++.+.++++|+
T Consensus         9 ~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   87 (250)
T PRK12939          9 RALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG-GRAHAIAADLADPASVQRFFDAAAAALGGLDG   87 (250)
T ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998877777777776544 35899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                   ...+.+.+++++.+++|+.+++.+++.+.|.|.+++.|++|++||..+..
T Consensus        88 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  148 (250)
T PRK12939         88 LVNNAGITNSK-------------------SATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW  148 (250)
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc
Confidence            99999975421                   23345778888999999999999999999999887789999999999998


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+..+.|+.+|+
T Consensus       149 ~~~~~~~y~~sK~  161 (250)
T PRK12939        149 GAPKLGAYVASKG  161 (250)
T ss_pred             CCCCcchHHHHHH
Confidence            8888889998875

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.94  E-value=5.3e-26  Score=171.63  Aligned_cols=153  Identities=26%  Similarity=0.395  Sum_probs=131.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||.++++.|+++|++|++++|+.+...+..+++...+ ..++.++.+|++|++++++ ++++.+.++++|
T Consensus         5 ~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id   83 (280)
T PRK06914          5 IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRID   83 (280)
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCee
Confidence            47999999999999999999999999999998776666655555433 2468899999999999999 999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||+|.....                   ...+.+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+.
T Consensus        84 ~vv~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~  144 (280)
T PRK06914         84 LLVNNAGYANGG-------------------FVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGR  144 (280)
T ss_pred             EEEECCcccccC-------------------ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccc
Confidence            999999975421                   1234567888999999999999999999999988888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|.
T Consensus       145 ~~~~~~~~Y~~sK~  158 (280)
T PRK06914        145 VGFPGLSPYVSSKY  158 (280)
T ss_pred             CCCCCCchhHHhHH
Confidence            99899999998885

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.94  E-value=5.8e-26  Score=174.80  Aligned_cols=139  Identities=27%  Similarity=0.355  Sum_probs=117.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+..++..+++... +.++.++.+|++|.++++++++++.+..+++|+
T Consensus         8 ~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~   86 (322)
T PRK07453          8 TVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP-PDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDA   86 (322)
T ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc-CCceEEEEecCCCHHHHHHHHHHHHHhCCCccE
Confidence            4899999999999999999999999999999987777777766432 235889999999999999999998888889999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC--CeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL--PRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~--g~iv~isS~~~  158 (174)
                      +|||||+..+..                  ...+.+.++++..|++|+.|++++++.++|.|++++.  ++||++||...
T Consensus        87 li~nAg~~~~~~------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~  148 (322)
T PRK07453         87 LVCNAAVYMPLL------------------KEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTA  148 (322)
T ss_pred             EEECCcccCCCC------------------CCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEccccc
Confidence            999999753210                  1123467889999999999999999999999988753  69999999764

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.5e-26  Score=171.68  Aligned_cols=146  Identities=28%  Similarity=0.379  Sum_probs=125.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+.+...+.    ...   ++.++.+|++|+++++++++++.+.++++|+
T Consensus         3 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          3 VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AAA---GFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHC---CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            589999999999999999999999999999986544332    221   3678899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   ....+.+.+++++.+++|+.+++.+++.++|.|++.. |+||++||..+..
T Consensus        76 vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~  135 (274)
T PRK05693         76 LINNAGYGAM-------------------GPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSR-GLVVNIGSVSGVL  135 (274)
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CEEEEECCccccC
Confidence            9999997432                   1234557788999999999999999999999997654 8999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+..+.|+.+|+
T Consensus       136 ~~~~~~~Y~~sK~  148 (274)
T PRK05693        136 VTPFAGAYCASKA  148 (274)
T ss_pred             CCCCccHHHHHHH
Confidence            9899999999885

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=4.9e-26  Score=169.83  Aligned_cols=153  Identities=24%  Similarity=0.229  Sum_probs=127.9

Q ss_pred             CEEEecCCC--chhHHHHHHHHHCCCeEEEEeeC-----------hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHH
Q 035504            1 YAVVTGANK--GIGYETVRQLASNGIIVVLTARD-----------EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSL   67 (174)
Q Consensus         1 ~~litGa~~--giG~~~a~~l~~~g~~v~~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~   67 (174)
                      ++|||||++  |||.+++++|+++|++|++++|+           ........+++...+ .++.++.+|++++++++++
T Consensus         7 ~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~   85 (256)
T PRK12748          7 IALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYG-VRCEHMEIDLSQPYAPNRV   85 (256)
T ss_pred             EEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHH
Confidence            489999995  99999999999999999999987           222222334444333 4589999999999999999


Q ss_pred             HHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC
Q 035504           68 ADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL  147 (174)
Q Consensus        68 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~  147 (174)
                      ++++.+.++++|++|||||....                   .+..+.+.+++++.+++|+.++++++++++|.|.++..
T Consensus        86 ~~~~~~~~g~id~vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  146 (256)
T PRK12748         86 FYAVSERLGDPSILINNAAYSTH-------------------TRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAG  146 (256)
T ss_pred             HHHHHHhCCCCCEEEECCCcCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCC
Confidence            99999999999999999997432                   12345577888899999999999999999999987777


Q ss_pred             CeEEEEecCCCcccCCCCcceeeecc
Q 035504          148 PRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       148 g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      ++||++||..+..+.++...|+.+|+
T Consensus       147 ~~iv~~ss~~~~~~~~~~~~Y~~sK~  172 (256)
T PRK12748        147 GRIINLTSGQSLGPMPDELAYAATKG  172 (256)
T ss_pred             eEEEEECCccccCCCCCchHHHHHHH
Confidence            89999999999888888899999885

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=6.9e-26  Score=167.33  Aligned_cols=153  Identities=27%  Similarity=0.364  Sum_probs=133.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|||+++|||.+++++|+++|++|++++|+.++..+..+++...+ .++.++.+|+++++++.++++++.++++++|+
T Consensus         9 ~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (239)
T PRK07666          9 NALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYG-VKVVIATADVSDYEEVTAAIEQLKNELGSIDI   87 (239)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-CeEEEEECCCCCHHHHHHHHHHHHHHcCCccE
Confidence            48999999999999999999999999999999877666666665433 46889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|....                   ....+.+.+++++.+++|+.+++++++.+.|.|.+++.+++|++||..+..
T Consensus        88 vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  148 (239)
T PRK07666         88 LINNAGISKF-------------------GKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQK  148 (239)
T ss_pred             EEEcCccccC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhcc
Confidence            9999997432                   123345677888999999999999999999999888789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|.
T Consensus       149 ~~~~~~~Y~~sK~  161 (239)
T PRK07666        149 GAAVTSAYSASKF  161 (239)
T ss_pred             CCCCCcchHHHHH
Confidence            8888888988874

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.2e-26  Score=170.84  Aligned_cols=151  Identities=23%  Similarity=0.324  Sum_probs=130.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+...+...++ . .+.++.++.+|++|.++++++++.+.+ ++++|+
T Consensus         7 ~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~id~   83 (263)
T PRK09072          7 RVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-YPGRHRWVVADLTSEAGREAVLARARE-MGGINV   83 (263)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-cCCceEEEEccCCCHHHHHHHHHHHHh-cCCCCE
Confidence            4899999999999999999999999999999977766666666 2 234688999999999999999998876 899999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   ...+.+.+++++++++|+.|++++++.++|+|.+++.++||++||..+..
T Consensus        84 lv~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~  144 (263)
T PRK09072         84 LINNAGVNHFA-------------------LLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI  144 (263)
T ss_pred             EEECCCCCCcc-------------------ccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc
Confidence            99999874321                   22345778889999999999999999999999888779999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|.
T Consensus       145 ~~~~~~~Y~~sK~  157 (263)
T PRK09072        145 GYPGYASYCASKF  157 (263)
T ss_pred             CCCCccHHHHHHH
Confidence            9898899998885

>PRK06196 oxidoreductase; Provisional

Probab=99.94  E-value=1.8e-26  Score=177.16  Aligned_cols=147  Identities=29%  Similarity=0.300  Sum_probs=121.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+..++..+++.     ++.++.+|++|.++++++++++.+.++++|+
T Consensus        28 ~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         28 TAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            48999999999999999999999999999999776666655553     3778999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||...+.                     .+.+.+.++..+++|+.+++++++.++|.|++++.++||++||..+..
T Consensus       103 li~nAg~~~~~---------------------~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~  161 (315)
T PRK06196        103 LINNAGVMACP---------------------ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRR  161 (315)
T ss_pred             EEECCCCCCCC---------------------CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhcc
Confidence            99999974321                     112345677789999999999999999999888778999999976532


Q ss_pred             ------------cCCCCcceeeecc
Q 035504          161 ------------KNTWQGAICYLTF  173 (174)
Q Consensus       161 ------------~~~~~~~y~~~k~  173 (174)
                                  +.+....|+.+|+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~Y~~SK~  186 (315)
T PRK06196        162 SPIRWDDPHFTRGYDKWLAYGQSKT  186 (315)
T ss_pred             CCCCccccCccCCCChHHHHHHHHH
Confidence                        1223456877774

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.94  E-value=6e-26  Score=168.47  Aligned_cols=153  Identities=22%  Similarity=0.304  Sum_probs=132.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+++||.+++++|+++|++|++++|+.+...+..+++...+ .++.++.+|++|.++++++++++.+.++++|+
T Consensus         5 ~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~   83 (250)
T TIGR03206         5 TAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKG-GNAQAFACDITDRDSVDTAVAAAEQALGPVDV   83 (250)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998877666666665543 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                   ...+.+.+++++.+++|+.+++++++.+.|.|++++.++||++||..+..
T Consensus        84 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~  144 (250)
T TIGR03206        84 LVNNAGWDKFG-------------------PFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARV  144 (250)
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhcc
Confidence            99999874321                   12345677888999999999999999999999888779999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       145 ~~~~~~~Y~~sK~  157 (250)
T TIGR03206       145 GSSGEAVYAACKG  157 (250)
T ss_pred             CCCCCchHHHHHH
Confidence            8888999998884

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.94  E-value=5e-26  Score=169.51  Aligned_cols=150  Identities=28%  Similarity=0.284  Sum_probs=128.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+... .+...++.   ..++.++.+|++++++++++++++.+.++++|+
T Consensus        17 ~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         17 VAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL---GGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999998653 33333332   234778999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|....                   .+..+.+.+++++.+++|+.+++++++.+.|.|++++.++||++||..+..
T Consensus        93 vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  153 (255)
T PRK06841         93 LVNSAGVALL-------------------APAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV  153 (255)
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc
Confidence            9999997432                   122345678889999999999999999999999887789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+.+|+
T Consensus       154 ~~~~~~~Y~~sK~  166 (255)
T PRK06841        154 ALERHVAYCASKA  166 (255)
T ss_pred             CCCCCchHHHHHH
Confidence            9999999999885

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.94  E-value=5.6e-26  Score=169.58  Aligned_cols=150  Identities=27%  Similarity=0.286  Sum_probs=128.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+.+.. +..+++...+ .++.++.+|+++++++.++++++.++++++|+
T Consensus         9 ~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (258)
T PRK08628          9 VVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQ-PRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDG   86 (258)
T ss_pred             EEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            589999999999999999999999999999987654 5556665554 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   .. +.+.+++++.+++|+.+++.+++.++|.|++.. |+|+++||..+..
T Consensus        87 vi~~ag~~~~~-------------------~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~iv~~ss~~~~~  145 (258)
T PRK08628         87 LVNNAGVNDGV-------------------GL-EAGREAFVASLERNLIHYYVMAHYCLPHLKASR-GAIVNISSKTALT  145 (258)
T ss_pred             EEECCcccCCC-------------------cc-cCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccC-cEEEEECCHHhcc
Confidence            99999973211                   11 223378899999999999999999999997664 8999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+.+|.
T Consensus       146 ~~~~~~~Y~~sK~  158 (258)
T PRK08628        146 GQGGTSGYAAAKG  158 (258)
T ss_pred             CCCCCchhHHHHH
Confidence            8888899999885

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.94  E-value=8.1e-26  Score=166.90  Aligned_cols=152  Identities=22%  Similarity=0.248  Sum_probs=127.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||||++|||.++|++|+++|++|++++|+. +...+..++++..+ .++.++.+|++|.++++++++++.+.++++|.
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQG-GNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC-CeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999988754 34455566666554 35899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhh-hhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLI-PLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~m~~~~~g~iv~isS~~~~  159 (174)
                      +|||+|.....                   .+.+.+.++++.++++|+.++++++++++ |.+++++.|+||++||..+.
T Consensus        80 li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~  140 (239)
T TIGR01831        80 VVLNAGITRDA-------------------AFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGV  140 (239)
T ss_pred             EEECCCCCCCC-------------------chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhc
Confidence            99999975321                   12345678889999999999999999875 55665667899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       141 ~~~~~~~~Y~~sK~  154 (239)
T TIGR01831       141 MGNRGQVNYSAAKA  154 (239)
T ss_pred             cCCCCCcchHHHHH
Confidence            99999999999986

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.94  E-value=7.1e-26  Score=167.53  Aligned_cols=153  Identities=25%  Similarity=0.245  Sum_probs=128.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|||++++||.++|++|+++|++|++++|+..+ ..+....+.. .+.++.++.+|++|+++++++++++.++++++|
T Consensus         4 ~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          4 IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF-TEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999999998542 2222222222 224588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||+|....                   ....+.+.+++++.+++|+.+++++++.++|.|++++.++||++||..+.
T Consensus        83 ~vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~  143 (245)
T PRK12824         83 ILVNNAGITRD-------------------SVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGL  143 (245)
T ss_pred             EEEECCCCCCC-------------------CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhc
Confidence            99999997432                   12335577889999999999999999999999988878999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       144 ~~~~~~~~Y~~sK~  157 (245)
T PRK12824        144 KGQFGQTNYSAAKA  157 (245)
T ss_pred             cCCCCChHHHHHHH
Confidence            88889999999985

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.94  E-value=6.8e-26  Score=170.78  Aligned_cols=153  Identities=25%  Similarity=0.353  Sum_probs=130.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+++||.+++++|+++|++|++++|+.+...+...++...+ .++.++.+|++|++++.++++++.+.++++|+
T Consensus        12 ~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   90 (274)
T PRK07775         12 PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADG-GEAVAFPLDVTDPDSVKSFVAQAEEALGEIEV   90 (274)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            48999999999999999999999999999998766666555565544 35888899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   ...+.+.+++++.+++|+.+++++++.++|.|.+++.|+||++||..+..
T Consensus        91 vi~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~  151 (274)
T PRK07775         91 LVSGAGDTYFG-------------------KLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALR  151 (274)
T ss_pred             EEECCCcCCCc-------------------ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcC
Confidence            99999974321                   12344667888899999999999999999999877779999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|....|+.+|+
T Consensus       152 ~~~~~~~Y~~sK~  164 (274)
T PRK07775        152 QRPHMGAYGAAKA  164 (274)
T ss_pred             CCCCcchHHHHHH
Confidence            8888889998885

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.94  E-value=7.6e-26  Score=168.98  Aligned_cols=153  Identities=21%  Similarity=0.210  Sum_probs=128.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|+++.++ .+...+..+++...+ .++.++.+|++|.+++.++++++.+.++++|
T Consensus        11 ~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD   89 (258)
T PRK09134         11 AALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALG-RRAVALQADLADEAEVRALVARASAALGPIT   89 (258)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999887764 344455555665444 4588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....                   ...+.+.+++++++++|+.+++++++++.+.|++...++||+++|..+.
T Consensus        90 ~vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~  150 (258)
T PRK09134         90 LLVNNASLFEYD-------------------SAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVW  150 (258)
T ss_pred             EEEECCcCCCCC-------------------ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhc
Confidence            999999974321                   2234577888999999999999999999999987777999999998777


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|....|+.+|+
T Consensus       151 ~~~p~~~~Y~~sK~  164 (258)
T PRK09134        151 NLNPDFLSYTLSKA  164 (258)
T ss_pred             CCCCCchHHHHHHH
Confidence            77777788999985

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.94  E-value=6.5e-26  Score=169.10  Aligned_cols=150  Identities=25%  Similarity=0.337  Sum_probs=125.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+....++..+++.      ..++++|++|+++++++++++.+.++++|+
T Consensus         9 ~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          9 VAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG------GLFVPTDVTDEDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             EEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC------CcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999998765554444431      257899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||...+..                 ....+.+.+.+++.+++|+.+++++++.++|+|++++.|+||++||..+..
T Consensus        83 vi~~ag~~~~~~-----------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~  145 (255)
T PRK06057         83 AFNNAGISPPED-----------------DSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVM  145 (255)
T ss_pred             EEECCCcCCCCC-----------------CCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhcc
Confidence            999998743210                 123455778889999999999999999999999887779999999998877


Q ss_pred             cCC-CCcceeeecc
Q 035504          161 KNT-WQGAICYLTF  173 (174)
Q Consensus       161 ~~~-~~~~y~~~k~  173 (174)
                      +.+ +...|+.+|+
T Consensus       146 g~~~~~~~Y~~sKa  159 (255)
T PRK06057        146 GSATSQISYTASKG  159 (255)
T ss_pred             CCCCCCcchHHHHH
Confidence            654 6778998884

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.94  E-value=1.4e-25  Score=165.75  Aligned_cols=153  Identities=25%  Similarity=0.251  Sum_probs=129.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||.+++++|+++|++|+++.| +.+...+..+++...+ .++.++.+|++|+++++++++++.+.++++|
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         2 IALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALG-FDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhC-CceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            5899999999999999999999999999988 4444444444444333 3588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||+|...+.                   ...+.+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+.
T Consensus        81 ~vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~  141 (242)
T TIGR01829        81 VLVNNAGITRDA-------------------TFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQ  141 (242)
T ss_pred             EEEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc
Confidence            999999974321                   1234577888999999999999999999999988888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|.
T Consensus       142 ~~~~~~~~y~~sk~  155 (242)
T TIGR01829       142 KGQFGQTNYSAAKA  155 (242)
T ss_pred             CCCCCcchhHHHHH
Confidence            88888899998885

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=1.3e-25  Score=167.25  Aligned_cols=155  Identities=26%  Similarity=0.345  Sum_probs=129.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh-HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK-RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||.+++++|+++|++|++++|+.. ...+..+.++..+ .++.++.+|++|++++.++++++.+.++++|
T Consensus         4 ~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          4 VALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALG-VEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            4899999999999999999999999999998643 3344445554433 4588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC------CCeEEEE
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD------LPRIVNV  153 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~------~g~iv~i  153 (174)
                      ++|||+|.....                 ..++.+.+.+++++.+++|+.+++++++.+.+.|+++.      .++||++
T Consensus        83 ~vi~~ag~~~~~-----------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~  145 (256)
T PRK12745         83 CLVNNAGVGVKV-----------------RGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFV  145 (256)
T ss_pred             EEEECCccCCCC-----------------CCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEE
Confidence            999999975321                 11234567788899999999999999999999998654      3579999


Q ss_pred             ecCCCcccCCCCcceeeecc
Q 035504          154 SSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       154 sS~~~~~~~~~~~~y~~~k~  173 (174)
                      ||..+..+.+..+.|+.+|.
T Consensus       146 sS~~~~~~~~~~~~Y~~sK~  165 (256)
T PRK12745        146 SSVNAIMVSPNRGEYCISKA  165 (256)
T ss_pred             CChhhccCCCCCcccHHHHH
Confidence            99999998888899999885

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.3e-25  Score=170.58  Aligned_cols=152  Identities=26%  Similarity=0.292  Sum_probs=127.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||.+++++|+++|++|++++|+... ..+....+...+ .++.++.+|++|+++++++++++.+.++++|
T Consensus        48 ~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD  126 (290)
T PRK06701         48 VALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEG-VKCLLIPGDVSDEAFCKDAVEETVRELGRLD  126 (290)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999999997543 334444444333 4588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....                  ....+.+.+++.+.+++|+.+++.+++++++.|++  .++||++||..+.
T Consensus       127 ~lI~~Ag~~~~~------------------~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~  186 (290)
T PRK06701        127 ILVNNAAFQYPQ------------------QSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGY  186 (290)
T ss_pred             EEEECCcccCCC------------------CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEeccccc
Confidence            999999974321                  12345677889999999999999999999999954  3799999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+.+|+
T Consensus       187 ~~~~~~~~Y~~sK~  200 (290)
T PRK06701        187 EGNETLIDYSATKG  200 (290)
T ss_pred             CCCCCcchhHHHHH
Confidence            88888899998885

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.5e-25  Score=165.92  Aligned_cols=151  Identities=23%  Similarity=0.254  Sum_probs=129.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+..++..+++...+..++.++++|++|+++++++++++.+   .+|.
T Consensus         3 ~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d~   79 (243)
T PRK07102          3 KILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPDI   79 (243)
T ss_pred             EEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCCE
Confidence            5899999999999999999999999999999987766666666655545789999999999999999887754   4699


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                   ...+.+.+++.+.+++|+.+++++++++.|+|.+++.++||++||..+..
T Consensus        80 vv~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  140 (243)
T PRK07102         80 VLIAVGTLGDQ-------------------AACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR  140 (243)
T ss_pred             EEECCcCCCCc-------------------ccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC
Confidence            99999974321                   23345678888899999999999999999999988889999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       141 ~~~~~~~Y~~sK~  153 (243)
T PRK07102        141 GRASNYVYGSAKA  153 (243)
T ss_pred             CCCCCcccHHHHH
Confidence            8888888998885

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.94  E-value=1.2e-25  Score=166.33  Aligned_cols=150  Identities=27%  Similarity=0.298  Sum_probs=128.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+++||.+++++|+++|+.|++.+|+.+..++....+    +.++.++.+|++|.++++++++++.++++++|+
T Consensus         8 ~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          8 KALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----GERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999888876655544333    235888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   +..+.+.+++++.+++|+.+++++++++.+.|++++.++||++||..+..
T Consensus        84 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  144 (245)
T PRK12936         84 LVNNAGITKDG-------------------LFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVT  144 (245)
T ss_pred             EEECCCCCCCC-------------------ccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCc
Confidence            99999974321                   12344667888999999999999999999988777779999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+.+|+
T Consensus       145 ~~~~~~~Y~~sk~  157 (245)
T PRK12936        145 GNPGQANYCASKA  157 (245)
T ss_pred             CCCCCcchHHHHH
Confidence            9898899998875

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.2e-25  Score=166.75  Aligned_cols=148  Identities=26%  Similarity=0.305  Sum_probs=126.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+...+..+++    +.++.++.+|++|.+++..+++++.+.++++|+
T Consensus         8 ~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          8 TALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----GESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5899999999999999999999999999999866554444433    245888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   +..+.+.+++++.+++|+.++++++++++|+|++  .+++|+++|..+..
T Consensus        84 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~  142 (249)
T PRK06500         84 VFINAGVAKFA-------------------PLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHI  142 (249)
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhcc
Confidence            99999974321                   2335577888999999999999999999999964  37899999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+.+|+
T Consensus       143 ~~~~~~~Y~~sK~  155 (249)
T PRK06500        143 GMPNSSVYAASKA  155 (249)
T ss_pred             CCCCccHHHHHHH
Confidence            9899999999885

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.8e-25  Score=165.77  Aligned_cols=154  Identities=26%  Similarity=0.271  Sum_probs=126.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||.+++++|+++|++|+++.++ ++...+..+++...+ .++.++.+|++|.++++++++++.++++++|
T Consensus         4 ~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06123          4 VMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQG-GEALAVAADVADEADVLRLFEAVDRELGRLD   82 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCC-CcEEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            48999999999999999999999998888754 334444555555443 3578899999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC---CCeEEEEecC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD---LPRIVNVSSN  156 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~isS~  156 (174)
                      ++|||||.....                  ....+.+.+++++.+++|+.+++.+++.++|.|+++.   .|+||++||.
T Consensus        83 ~li~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~  144 (248)
T PRK06123         83 ALVNNAGILEAQ------------------MRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSM  144 (248)
T ss_pred             EEEECCCCCCCC------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECch
Confidence            999999974321                  1234567788999999999999999999999997542   4789999999


Q ss_pred             CCcccCCCC-cceeeecc
Q 035504          157 MGKLKNTWQ-GAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~-~~y~~~k~  173 (174)
                      .+..+.++. ..|+.+|+
T Consensus       145 ~~~~~~~~~~~~Y~~sKa  162 (248)
T PRK06123        145 AARLGSPGEYIDYAASKG  162 (248)
T ss_pred             hhcCCCCCCccchHHHHH
Confidence            998887763 67999885

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.7e-25  Score=168.55  Aligned_cols=155  Identities=20%  Similarity=0.203  Sum_probs=132.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||||++++||.+++++|+++|++|++++|+.+...+..+++.... +.++.++.+|++|+++++++++++.++++++|
T Consensus         9 ~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   88 (276)
T PRK05875          9 TYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLH   88 (276)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999999998776666666665432 24688899999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||+|.....                  ....+.+.+++...+++|+.+++.+++++++.|.+++.|+|+++||..+.
T Consensus        89 ~li~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~  150 (276)
T PRK05875         89 GVVHCAGGSETI------------------GPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS  150 (276)
T ss_pred             EEEECCCcccCC------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence            999999974321                  11234567788899999999999999999999987777899999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|..+.|+.+|+
T Consensus       151 ~~~~~~~~Y~~sK~  164 (276)
T PRK05875        151 NTHRWFGAYGVTKS  164 (276)
T ss_pred             CCCCCCcchHHHHH
Confidence            88888899999884

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.9e-25  Score=165.86  Aligned_cols=153  Identities=29%  Similarity=0.375  Sum_probs=127.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+...+..+++.... .++.++.+|++|.++++++++++.+.++++|+
T Consensus         8 ~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (250)
T PRK07774          8 VAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADG-GTAIAVQVDVSDPDSAKAMADATVSAFGGIDY   86 (250)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999998766666666665443 34788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||......                .....+.+.+++++.+++|+.+++.++++++|+|.+.+.|+||++||..+..
T Consensus        87 vi~~ag~~~~~~----------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  150 (250)
T PRK07774         87 LVNNAAIYGGMK----------------LDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL  150 (250)
T ss_pred             EEECCCCcCCCC----------------CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC
Confidence            999999853211                1123455778889999999999999999999999877779999999987754


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                         ..+.|+.+|+
T Consensus       151 ---~~~~Y~~sK~  160 (250)
T PRK07774        151 ---YSNFYGLAKV  160 (250)
T ss_pred             ---CccccHHHHH
Confidence               3467888875

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.94  E-value=2.7e-25  Score=164.97  Aligned_cols=154  Identities=28%  Similarity=0.276  Sum_probs=126.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEe-eChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTA-RDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||.++++.|+++|++|+++. |+.+..++...++...+ .++.++.+|++|.++++++++++.+.++++|
T Consensus         4 ~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          4 VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAG-GRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            589999999999999999999999998775 45444555555565443 4588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC---CCeEEEEecC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD---LPRIVNVSSN  156 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~isS~  156 (174)
                      ++|||||...+.                  ....+.+.++++..+++|+.+++.+++.+++.|..++   .++||++||.
T Consensus        83 ~li~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~  144 (248)
T PRK06947         83 ALVNNAGIVAPS------------------MPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSI  144 (248)
T ss_pred             EEEECCccCCCC------------------CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence            999999975321                  1234567788999999999999999999999986553   4789999999


Q ss_pred             CCcccCCC-Ccceeeecc
Q 035504          157 MGKLKNTW-QGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~-~~~y~~~k~  173 (174)
                      .+..+.+. ...|+.+|+
T Consensus       145 ~~~~~~~~~~~~Y~~sK~  162 (248)
T PRK06947        145 ASRLGSPNEYVDYAGSKG  162 (248)
T ss_pred             hhcCCCCCCCcccHhhHH
Confidence            99887664 468999886

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=2.2e-25  Score=166.48  Aligned_cols=153  Identities=30%  Similarity=0.301  Sum_probs=128.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+++||.+++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+.++++|+
T Consensus        14 ~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~-~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~   92 (259)
T PRK08213         14 TALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALG-IDALWIAADVADEADIERLAEETLERFGHVDI   92 (259)
T ss_pred             EEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999998776666666665443 35788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhh-ccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPL-LQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-m~~~~~g~iv~isS~~~~  159 (174)
                      +|||||.....                   +..+.+.+.+++++++|+.+++.+.+++.|+ |.+++.++||++||..+.
T Consensus        93 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~  153 (259)
T PRK08213         93 LVNNAGATWGA-------------------PAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL  153 (259)
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhc
Confidence            99999974321                   1234567888999999999999999999998 777777899999998887


Q ss_pred             ccCCC----Ccceeeecc
Q 035504          160 LKNTW----QGAICYLTF  173 (174)
Q Consensus       160 ~~~~~----~~~y~~~k~  173 (174)
                      .+.+.    ...|+.+|.
T Consensus       154 ~~~~~~~~~~~~Y~~sKa  171 (259)
T PRK08213        154 GGNPPEVMDTIAYNTSKG  171 (259)
T ss_pred             cCCCccccCcchHHHHHH
Confidence            76554    377888774

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.8e-25  Score=163.74  Aligned_cols=151  Identities=30%  Similarity=0.375  Sum_probs=127.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh-HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK-RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||+++++.|+++|++++++.++.+ ...+..+++...+ .++.++.+|++|.++++++++++.+.++++|
T Consensus         7 ~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   85 (245)
T PRK12937          7 VAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAG-GRAIAVQADVADAAAVTRLFDAAETAFGRID   85 (245)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999988887544 3444555555443 4689999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....                   ...+.+.+++++++++|+.+++.++++++|.|++  .|+||++||..+.
T Consensus        86 ~vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~  144 (245)
T PRK12937         86 VLVNNAGVMPLG-------------------TIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIA  144 (245)
T ss_pred             EEEECCCCCCCC-------------------ChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeecccc
Confidence            999999974321                   2234567888999999999999999999999964  3899999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|.+..|+.+|.
T Consensus       145 ~~~~~~~~Y~~sK~  158 (245)
T PRK12937        145 LPLPGYGPYAASKA  158 (245)
T ss_pred             CCCCCCchhHHHHH
Confidence            88899999999885

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=2.9e-25  Score=165.11  Aligned_cols=156  Identities=22%  Similarity=0.221  Sum_probs=125.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC-c
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK-L   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~-i   78 (174)
                      +++||||++|||++++++|+++|++|+++.++ .+..++...++    +.++.++++|++|++++.++++++.+.+++ +
T Consensus         7 ~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          7 TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----GDRAIALQADVTDREQVQAMFATATEHFGKPI   82 (253)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            48999999999999999999999999887654 33333333332    245888999999999999999999999987 9


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||......             +.......+.+.+++++.+++|+.+++.++++++|.|.+++.|+||++||..+
T Consensus        83 d~li~~ag~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  149 (253)
T PRK08642         83 TTVVNNALADFSFD-------------GDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLF  149 (253)
T ss_pred             eEEEECCCcccccc-------------ccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccc
Confidence            99999998743210             01112345667889999999999999999999999998777799999999887


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       150 ~~~~~~~~~Y~~sK~  164 (253)
T PRK08642        150 QNPVVPYHDYTTAKA  164 (253)
T ss_pred             cCCCCCccchHHHHH
Confidence            766667788998885

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.5e-25  Score=165.71  Aligned_cols=152  Identities=30%  Similarity=0.387  Sum_probs=131.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.++++.|+++|++|++++|+....++..+++...+ .++.++.+|++|+++++++++++.++++++|+
T Consensus         3 ~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          3 VVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHG-GEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             EEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999999777666666666544 46888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCccccccccc-CHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTP-TYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +|||+|.....                   ...+. +.+++.+.+++|+.+++.+++.+.|.|++.. ++||++||..+.
T Consensus        82 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~iv~~sS~~~~  141 (263)
T PRK06181         82 LVNNAGITMWS-------------------RFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR-GQIVVVSSLAGL  141 (263)
T ss_pred             EEECCCccccc-------------------chhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CEEEEEeccccc
Confidence            99999874321                   12233 6788899999999999999999999987664 899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|.
T Consensus       142 ~~~~~~~~Y~~sK~  155 (263)
T PRK06181        142 TGVPTRSGYAASKH  155 (263)
T ss_pred             CCCCCccHHHHHHH
Confidence            88888899998885

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.2e-25  Score=185.90  Aligned_cols=155  Identities=26%  Similarity=0.301  Sum_probs=133.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|.++++++++++.+++|++|+
T Consensus       373 ~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  451 (657)
T PRK07201        373 VVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKG-GTAHAYTCDLTDSAAVDHTVKDILAEHGHVDY  451 (657)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            48999999999999999999999999999999887777777776554 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||......                +. ......+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..
T Consensus       452 li~~Ag~~~~~~----------------~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  514 (657)
T PRK07201        452 LVNNAGRSIRRS----------------VE-NSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT  514 (657)
T ss_pred             EEECCCCCCCCC----------------hh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC
Confidence            999999743211                00 0011246788999999999999999999999988889999999999998


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+.+.|+.+|+
T Consensus       515 ~~~~~~~Y~~sK~  527 (657)
T PRK07201        515 NAPRFSAYVASKA  527 (657)
T ss_pred             CCCCcchHHHHHH
Confidence            8899999999985

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=3.5e-26  Score=173.92  Aligned_cols=153  Identities=18%  Similarity=0.188  Sum_probs=113.1

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHH---------hhcCCC-----ceeEEEeecCChh--
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL---------KHSGFD-----SVIFHQLDVADPA--   62 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l---------~~~~~~-----~~~~~~~Dv~~~~--   62 (174)
                      ++||||++  +|||+++|+.|+++|++|++.++.+ ......+..         ....+.     ++..+.+|+++.+  
T Consensus        10 ~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~v   88 (299)
T PRK06300         10 IAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPEDV   88 (299)
T ss_pred             EEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEEe
Confidence            58999996  9999999999999999999976541 001000000         000001     1112234444443  


Q ss_pred             ----------------hHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHh
Q 035504           63 ----------------TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRT  126 (174)
Q Consensus        63 ----------------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (174)
                                      +++++++++.+++|++|++|||||....                 ...++.+.+.++|++.|++
T Consensus        89 ~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~-----------------~~~~~~~~~~e~~~~~~~v  151 (299)
T PRK06300         89 PEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPE-----------------ISKPLLETSRKGYLAALST  151 (299)
T ss_pred             ecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcc-----------------cCCChhhCCHHHHHHHHHH
Confidence                            5899999999999999999999986321                 1123456788999999999


Q ss_pred             hhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcccCCCCc-ceeeecc
Q 035504          127 NYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQG-AICYLTF  173 (174)
Q Consensus       127 n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~-~y~~~k~  173 (174)
                      |+.|+++++|+++|+|+++  |+||++||+.+..+.|+.. .|+++|+
T Consensus       152 Nl~g~~~l~~a~~p~m~~~--G~ii~iss~~~~~~~p~~~~~Y~asKa  197 (299)
T PRK06300        152 SSYSFVSLLSHFGPIMNPG--GSTISLTYLASMRAVPGYGGGMSSAKA  197 (299)
T ss_pred             HhHHHHHHHHHHHHHhhcC--CeEEEEeehhhcCcCCCccHHHHHHHH
Confidence            9999999999999999753  8999999999988888765 8999985

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4e-25  Score=164.81  Aligned_cols=153  Identities=27%  Similarity=0.308  Sum_probs=130.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+..++...++...+ .++.++.+|+++++++.++++++.+.++++|+
T Consensus        11 ~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (258)
T PRK06949         11 VALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG-GAAHVVSLDVTDYQSIKAAVAHAETEAGTIDI   89 (258)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            58999999999999999999999999999999877777666665544 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC--------CCeEEE
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD--------LPRIVN  152 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--------~g~iv~  152 (174)
                      +|||+|.....                   ...+.+.++++.++++|+.+++.+.+.++|.|.++.        .|+||+
T Consensus        90 li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~  150 (258)
T PRK06949         90 LVNNSGVSTTQ-------------------KLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIIN  150 (258)
T ss_pred             EEECCCCCCCC-------------------CcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEE
Confidence            99999974321                   223446678889999999999999999999986553        479999


Q ss_pred             EecCCCcccCCCCcceeeecc
Q 035504          153 VSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       153 isS~~~~~~~~~~~~y~~~k~  173 (174)
                      +||..+..+.+....|+.+|.
T Consensus       151 ~sS~~~~~~~~~~~~Y~~sK~  171 (258)
T PRK06949        151 IASVAGLRVLPQIGLYCMSKA  171 (258)
T ss_pred             ECcccccCCCCCccHHHHHHH
Confidence            999999888888889988875

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=2.6e-25  Score=164.98  Aligned_cols=154  Identities=25%  Similarity=0.281  Sum_probs=138.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCC-ceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      .++|||+|+|||+++|.++.++|++|.++.|+.+.+.+.+++++-.... ++.+..+|+.|.+++..+++++.+.++++|
T Consensus        35 hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d  114 (331)
T KOG1210|consen   35 HILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPID  114 (331)
T ss_pred             eEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcc
Confidence            3799999999999999999999999999999999888888887654322 377899999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~  158 (174)
                      .+|+|||..-+.                   .+.+.++++++..|++|+.|+++++++.+|.|++.. .|+|+.+||..|
T Consensus       115 ~l~~cAG~~v~g-------------------~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a  175 (331)
T KOG1210|consen  115 NLFCCAGVAVPG-------------------LFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLA  175 (331)
T ss_pred             eEEEecCccccc-------------------ccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhh
Confidence            999999986542                   345668899999999999999999999999999887 689999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++.++|+.+|+
T Consensus       176 ~~~i~GysaYs~sK~  190 (331)
T KOG1210|consen  176 MLGIYGYSAYSPSKF  190 (331)
T ss_pred             hcCcccccccccHHH
Confidence            999999999999985

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.93  E-value=1.3e-25  Score=166.26  Aligned_cols=149  Identities=29%  Similarity=0.343  Sum_probs=129.9

Q ss_pred             cCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc-CCccEEE
Q 035504            6 GAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF-GKLDILV   82 (174)
Q Consensus         6 Ga~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-g~id~li   82 (174)
                      |++  +|||+++|++|+++|++|++++|+.+...+..+++.+..+.+  ++.+|++|+++++++++++.+++ |+||++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            566  999999999999999999999999888777777887766554  59999999999999999999999 9999999


Q ss_pred             ecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcccC
Q 035504           83 NNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN  162 (174)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  162 (174)
                      ||+|...+..               ...++.+.+.++|++.+++|+.+++.++|+++|+|++.  |+||++||..+..+.
T Consensus        79 ~~a~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~  141 (241)
T PF13561_consen   79 NNAGISPPSN---------------VEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPM  141 (241)
T ss_dssp             EEEESCTGGG---------------TSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBS
T ss_pred             eccccccccc---------------CCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccC
Confidence            9999854310               12345667889999999999999999999999988765  899999999999988


Q ss_pred             CCCcceeeecc
Q 035504          163 TWQGAICYLTF  173 (174)
Q Consensus       163 ~~~~~y~~~k~  173 (174)
                      ++...|+.+|.
T Consensus       142 ~~~~~y~~sKa  152 (241)
T PF13561_consen  142 PGYSAYSASKA  152 (241)
T ss_dssp             TTTHHHHHHHH
T ss_pred             ccchhhHHHHH
Confidence            99899988874

...

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5.3e-25  Score=166.10  Aligned_cols=129  Identities=25%  Similarity=0.330  Sum_probs=108.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|||+ +|||+++|++|+ +|++|++++|+.+..++..++++..+ .++.++++|++|+++++++++++ ++++++|+
T Consensus         4 ~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id~   79 (275)
T PRK06940          4 VVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAG-FDVSTQEVDVSSRESVKALAATA-QTLGPVTG   79 (275)
T ss_pred             EEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEeecCCHHHHHHHHHHH-HhcCCCCE
Confidence            5799998 699999999996 89999999998777666666676543 35888999999999999999988 56899999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+..                          ..+++++++++|+.+++++++.++|.|+++  |++|++||.++..
T Consensus        80 li~nAG~~~--------------------------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~  131 (275)
T PRK06940         80 LVHTAGVSP--------------------------SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHR  131 (275)
T ss_pred             EEECCCcCC--------------------------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEeccccc
Confidence            999999731                          113467789999999999999999999654  7889999998876


Q ss_pred             c
Q 035504          161 K  161 (174)
Q Consensus       161 ~  161 (174)
                      +
T Consensus       132 ~  132 (275)
T PRK06940        132 L  132 (275)
T ss_pred             C
Confidence            4

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.93  E-value=3.8e-25  Score=184.37  Aligned_cols=154  Identities=23%  Similarity=0.201  Sum_probs=133.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+...+..+++.... ..++..+.+|++|+++++++++++.+++|++|
T Consensus       416 vvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iD  495 (676)
T TIGR02632       416 VAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVD  495 (676)
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            58999999999999999999999999999999877666666665432 23578899999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~  158 (174)
                      ++|||||.....                   +..+.+.++|+..+++|+.+++.+++.++|.|++++ .|+||++||..+
T Consensus       496 ilV~nAG~~~~~-------------------~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a  556 (676)
T TIGR02632       496 IVVNNAGIATSS-------------------PFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNA  556 (676)
T ss_pred             EEEECCCCCCCC-------------------CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhh
Confidence            999999974321                   223456788999999999999999999999998765 579999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       557 ~~~~~~~~aY~aSKa  571 (676)
T TIGR02632       557 VYAGKNASAYSAAKA  571 (676)
T ss_pred             cCCCCCCHHHHHHHH
Confidence            999999999999985

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.93  E-value=5.3e-25  Score=163.66  Aligned_cols=144  Identities=24%  Similarity=0.249  Sum_probs=125.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+++||.+++++|+++|++|++++|+.         +.. .+.++.++++|++|+++++++++++.++++++|+
T Consensus        10 ~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220         10 TVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ-EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            489999999999999999999999999999875         111 1235888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                   +..+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+..
T Consensus        80 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~  140 (252)
T PRK08220         80 LVNAAGILRMG-------------------ATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV  140 (252)
T ss_pred             EEECCCcCCCC-------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc
Confidence            99999974321                   23345678899999999999999999999999888789999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       141 ~~~~~~~Y~~sK~  153 (252)
T PRK08220        141 PRIGMAAYGASKA  153 (252)
T ss_pred             CCCCCchhHHHHH
Confidence            8888899998885

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.5e-25  Score=163.31  Aligned_cols=153  Identities=25%  Similarity=0.363  Sum_probs=130.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||..++++|+++|++ |++++|+.+...+...++...+ .++.++.+|+++++++.++++++.++++++|
T Consensus         8 ~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   86 (260)
T PRK06198          8 VALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALG-AKAVFVQADLSDVEDCRRVVAAADEAFGRLD   86 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            4899999999999999999999999 9999998766666666664443 4588899999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~  158 (174)
                      ++|||+|.....                   ...+.+.+++++++++|+.+++.++++++|.|.+++ .|++|++||..+
T Consensus        87 ~li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~  147 (260)
T PRK06198         87 ALVNAAGLTDRG-------------------TILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSA  147 (260)
T ss_pred             EEEECCCcCCCC-------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccc
Confidence            999999974321                   123557788899999999999999999999997654 589999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.+..+.|+.+|+
T Consensus       148 ~~~~~~~~~Y~~sK~  162 (260)
T PRK06198        148 HGGQPFLAAYCASKG  162 (260)
T ss_pred             ccCCCCcchhHHHHH
Confidence            888888899999885

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.93  E-value=7.3e-25  Score=162.55  Aligned_cols=153  Identities=27%  Similarity=0.318  Sum_probs=132.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+++||.+++++|+++|++|++++|+.+...+..+++...+ .++.++.+|++|.++++++++++.++++++|+
T Consensus         8 ~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   86 (251)
T PRK12826          8 VALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG-GKARARQVDVRDRAALKAAVAAGVEDFGRLDI   86 (251)
T ss_pred             EEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999999776666666666544 34889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc-
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK-  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~-  159 (174)
                      +|||+|...+.                   +..+.+.+++++.+++|+.+++.+.+.++|.|++++.++||++||..+. 
T Consensus        87 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~  147 (251)
T PRK12826         87 LVANAGIFPLT-------------------PFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPR  147 (251)
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhc
Confidence            99999875431                   1234567888899999999999999999999988777899999999988 


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+.+|.
T Consensus       148 ~~~~~~~~y~~sK~  161 (251)
T PRK12826        148 VGYPGLAHYAASKA  161 (251)
T ss_pred             cCCCCccHHHHHHH
Confidence            67788888988874

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.93  E-value=1.1e-24  Score=161.44  Aligned_cols=154  Identities=26%  Similarity=0.275  Sum_probs=127.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEE-eeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||+++||.+++++|+++|++|+++ .|+.+...+...++...+ .++..+++|++|+++++++++++.+.++++|
T Consensus         3 ~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          3 IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAG-GKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCC-CeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            48999999999999999999999998775 566555555666665543 3588899999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC---CCeEEEEecC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD---LPRIVNVSSN  156 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~isS~  156 (174)
                      ++|||+|.....                  ....+.+.++++..+++|+.+++++++.+++.|.++.   .|+||++||.
T Consensus        82 ~vi~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~  143 (247)
T PRK09730         82 ALVNNAGILFTQ------------------CTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSA  143 (247)
T ss_pred             EEEECCCCCCCC------------------CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence            999999974321                  1234567788999999999999999999999987653   5789999999


Q ss_pred             CCcccCCC-Ccceeeecc
Q 035504          157 MGKLKNTW-QGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~-~~~y~~~k~  173 (174)
                      .+..+.|+ ...|+.+|+
T Consensus       144 ~~~~~~~~~~~~Y~~sK~  161 (247)
T PRK09730        144 ASRLGAPGEYVDYAASKG  161 (247)
T ss_pred             hhccCCCCcccchHhHHH
Confidence            99888775 367888874

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.93  E-value=1.6e-24  Score=161.17  Aligned_cols=153  Identities=28%  Similarity=0.344  Sum_probs=131.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+++||++++++|+++|++|++++|+.+..++...++...+ .++.++.+|++|.+++.++++++.+.++++|+
T Consensus         3 ~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         3 TALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAG-GSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             EEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            48999999999999999999999999999998776666666555443 45889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                   ...+.+.+++++.+++|+.+++.+++.++|.|++.+.+++|++||..+..
T Consensus        82 vi~~a~~~~~~-------------------~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~  142 (255)
T TIGR01963        82 LVNNAGIQHVA-------------------PIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLV  142 (255)
T ss_pred             EEECCCCCCCC-------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcC
Confidence            99999975321                   12344567888999999999999999999999888888999999998888


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+.+|.
T Consensus       143 ~~~~~~~y~~sk~  155 (255)
T TIGR01963       143 ASPFKSAYVAAKH  155 (255)
T ss_pred             CCCCCchhHHHHH
Confidence            8888889988873

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.2e-24  Score=159.49  Aligned_cols=144  Identities=18%  Similarity=0.141  Sum_probs=113.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++++|+++|++|++++|+.++..+..+++      ++.++++|++|+++++++++++.+   ++|+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~---~id~   72 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL------DVDAIVCDNTDPASLEEARGLFPH---HLDT   72 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCcEEecCCCCHHHHHHHHHHHhh---cCcE
Confidence            4799999999999999999999999999999877665554443      256789999999999999887653   6999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|......            .+ ....+.+ +.++|++++++|+.++++++|+++|.|++  .|+||++||..   
T Consensus        73 lv~~ag~~~~~~------------~~-~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~---  133 (223)
T PRK05884         73 IVNVPAPSWDAG------------DP-RTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN---  133 (223)
T ss_pred             EEECCCccccCC------------CC-cccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC---
Confidence            999998632110            00 0111223 46789999999999999999999999964  38999999976   


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                       .+....|+++|+
T Consensus       134 -~~~~~~Y~asKa  145 (223)
T PRK05884        134 -PPAGSAEAAIKA  145 (223)
T ss_pred             -CCCccccHHHHH
Confidence             356688999985

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.3e-24  Score=160.25  Aligned_cols=151  Identities=30%  Similarity=0.349  Sum_probs=129.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+++||.+++++|+++|++|++++|+++...+..+++...  .++.++.+|++|.+++.++++++.+.++++|+
T Consensus         8 ~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (237)
T PRK07326          8 VALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK--GNVLGLAADVRDEADVQRAVDAIVAAFGGLDV   85 (237)
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc--CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999887766666666543  35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                   ...+.+.+++++.+++|+.+++.+++++++.|+ .+.++||++||..+..
T Consensus        86 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~iv~~ss~~~~~  145 (237)
T PRK07326         86 LIANAGVGHFA-------------------PVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGGGYIINISSLAGTN  145 (237)
T ss_pred             EEECCCCCCCC-------------------chhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCCeEEEEECChhhcc
Confidence            99999874321                   234557788899999999999999999999994 3458999999999888


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+.+|+
T Consensus       146 ~~~~~~~y~~sk~  158 (237)
T PRK07326        146 FFAGGAAYNASKF  158 (237)
T ss_pred             CCCCCchHHHHHH
Confidence            8788888888774

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.8e-25  Score=163.25  Aligned_cols=149  Identities=20%  Similarity=0.198  Sum_probs=123.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHH-HHhhc---C
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADF-VRSQF---G   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~-~~~~~---g   76 (174)
                      ++|||||++|||.+++++|+++|++|++++|+....  .    ....+.++.++++|++|++++++++.+ +.+.+   +
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            489999999999999999999999999999875431  1    112234688899999999999998876 55554   4


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|++|||+|...+..                  +..+.+.+++++.+++|+.+++.+++.+.|.|.+++.++||++||.
T Consensus        77 ~~~~~v~~ag~~~~~~------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~  138 (243)
T PRK07023         77 SRVLLINNAGTVEPIG------------------PLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSG  138 (243)
T ss_pred             CceEEEEcCcccCCCC------------------ccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeCh
Confidence            7999999999754311                  1234467888999999999999999999999988877999999999


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      .+..+.++...|+.+|+
T Consensus       139 ~~~~~~~~~~~Y~~sK~  155 (243)
T PRK07023        139 AARNAYAGWSVYCATKA  155 (243)
T ss_pred             hhcCCCCCchHHHHHHH
Confidence            99988888999999885

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=1.2e-24  Score=161.11  Aligned_cols=153  Identities=29%  Similarity=0.367  Sum_probs=131.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEE-eeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+++||.+++++|+++|++|+++ .|+.+...+..+.+...+ .++.++.+|++|.+++.++++++.+.++++|
T Consensus         7 ~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (247)
T PRK05565          7 VAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEG-GDAIAVKADVSSEEDVENLVEQIVEKFGKID   85 (247)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            48999999999999999999999999998 888766666666665533 4588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||+|....                   ....+.+.+++++.+++|+.+++.+++.+.|.|.+++.+++|++||..+.
T Consensus        86 ~vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~  146 (247)
T PRK05565         86 ILVNNAGISNF-------------------GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGL  146 (247)
T ss_pred             EEEECCCcCCC-------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhc
Confidence            99999998521                   12234577889999999999999999999999988877999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+.+|.
T Consensus       147 ~~~~~~~~y~~sK~  160 (247)
T PRK05565        147 IGASCEVLYSASKG  160 (247)
T ss_pred             cCCCCccHHHHHHH
Confidence            88888889988874

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2e-24  Score=160.82  Aligned_cols=151  Identities=26%  Similarity=0.368  Sum_probs=125.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEE-eeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc----
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF----   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~----   75 (174)
                      +++||||++|||.++|++|+++|++|++. .|+.+...+..+++...+ .++.++.+|++|++++.++++++.+++    
T Consensus         8 ~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~   86 (254)
T PRK12746          8 VALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNG-GKAFLIEADLNSIDGVKKLVEQLKNELQIRV   86 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence            48999999999999999999999998775 676655555555554433 358889999999999999999999887    


Q ss_pred             --CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEE
Q 035504           76 --GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNV  153 (174)
Q Consensus        76 --g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~i  153 (174)
                        +++|++|||||.....                   ...+.+.+.++.++++|+.+++++++.++|.|.+.  +++|++
T Consensus        87 ~~~~id~vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~  145 (254)
T PRK12746         87 GTSEIDILVNNAGIGTQG-------------------TIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINI  145 (254)
T ss_pred             CCCCccEEEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEE
Confidence              5799999999974321                   23355778889999999999999999999998643  799999


Q ss_pred             ecCCCcccCCCCcceeeecc
Q 035504          154 SSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       154 sS~~~~~~~~~~~~y~~~k~  173 (174)
                      ||..+..+.++...|+.+|+
T Consensus       146 sS~~~~~~~~~~~~Y~~sK~  165 (254)
T PRK12746        146 SSAEVRLGFTGSIAYGLSKG  165 (254)
T ss_pred             CCHHhcCCCCCCcchHhhHH
Confidence            99999888888899998885

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.6e-24  Score=160.61  Aligned_cols=150  Identities=21%  Similarity=0.224  Sum_probs=119.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh----hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE----KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +++||||++|||.++|+.|+++|++|+++.++.    +...+..++++..+ .++.++++|++|+++++++++++.+.++
T Consensus        10 ~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   88 (257)
T PRK12744         10 VVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAG-AKAVAFQADLTTAAAVEKLFDDAKAAFG   88 (257)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhC-CcEEEEecCcCCHHHHHHHHHHHHHhhC
Confidence            489999999999999999999999977765532    23334444554443 3588899999999999999999999999


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEE-ec
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNV-SS  155 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~i-sS  155 (174)
                      ++|++|||||....                   .+..+.+.+++++++++|+.+++.+++++.|.|++.  |+++++ ||
T Consensus        89 ~id~li~~ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss  147 (257)
T PRK12744         89 RPDIAINTVGKVLK-------------------KPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTS  147 (257)
T ss_pred             CCCEEEECCcccCC-------------------CCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecc
Confidence            99999999997432                   123445778899999999999999999999999643  677776 45


Q ss_pred             CCCcccCCCCcceeeecc
Q 035504          156 NMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       156 ~~~~~~~~~~~~y~~~k~  173 (174)
                      ..+. +.|..+.|+.+|+
T Consensus       148 ~~~~-~~~~~~~Y~~sK~  164 (257)
T PRK12744        148 LLGA-FTPFYSAYAGSKA  164 (257)
T ss_pred             hhcc-cCCCcccchhhHH
Confidence            4443 4577899999986

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.1e-24  Score=159.00  Aligned_cols=153  Identities=24%  Similarity=0.286  Sum_probs=126.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC----hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD----EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +++||||++|||+++|++|+++|++|++++|.    .+...+...++...+ .++.++.+|++|.++++++++++.+.++
T Consensus         8 ~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (249)
T PRK12827          8 RVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAG-GKALGLAFDVRDFAATRAALDAGVEEFG   86 (249)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            48999999999999999999999999987653    223333444444433 4588999999999999999999999999


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhh-hhccCCCCCeEEEEec
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLI-PLLQLSDLPRIVNVSS  155 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~m~~~~~g~iv~isS  155 (174)
                      ++|.+|||+|.....                   ...+.+.+++++.+++|+.+++.+++++. |.|++++.++||++||
T Consensus        87 ~~d~vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  147 (249)
T PRK12827         87 RLDILVNNAGIATDA-------------------AFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIAS  147 (249)
T ss_pred             CCCEEEECCCCCCCC-------------------CcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECC
Confidence            999999999975421                   22345678889999999999999999999 7777777789999999


Q ss_pred             CCCcccCCCCcceeeecc
Q 035504          156 NMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       156 ~~~~~~~~~~~~y~~~k~  173 (174)
                      ..+..+.++...|+.+|+
T Consensus       148 ~~~~~~~~~~~~y~~sK~  165 (249)
T PRK12827        148 VAGVRGNRGQVNYAASKA  165 (249)
T ss_pred             chhcCCCCCCchhHHHHH
Confidence            999988888899998885

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.92  E-value=3.4e-24  Score=157.88  Aligned_cols=152  Identities=29%  Similarity=0.372  Sum_probs=128.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +||||++++||..++++|+++|++|++++|+. +...+..+.+...+ .++.++.+|++|+++++++++++.+.++++|.
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYG-VKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            58999999999999999999999999998875 33334445555444 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                   ...+.+.+++++.+++|+.+++++++.+.++|.+.+.++++++||..+..
T Consensus        80 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~  140 (239)
T TIGR01830        80 LVNNAGITRDN-------------------LLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM  140 (239)
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC
Confidence            99999974321                   12345667888999999999999999999998777778999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+++|.
T Consensus       141 g~~~~~~y~~~k~  153 (239)
T TIGR01830       141 GNAGQANYAASKA  153 (239)
T ss_pred             CCCCCchhHHHHH
Confidence            9898999998884

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.92  E-value=3.5e-24  Score=158.30  Aligned_cols=153  Identities=29%  Similarity=0.362  Sum_probs=131.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+++||..++++|+++|++|++++|+++.......++...+ .++.++.+|++|.+++.++++++.+.++++|.
T Consensus         7 ~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (246)
T PRK05653          7 TALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG-GEARVLVFDVSDEAAVRALIEAAVEAFGALDI   85 (246)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999999777666666665544 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +||++|.....                   ...+.+.+++++.++.|+.+++++++++.|+|.+.+.++||++||..+..
T Consensus        86 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~  146 (246)
T PRK05653         86 LVNNAGITRDA-------------------LLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT  146 (246)
T ss_pred             EEECCCcCCCC-------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc
Confidence            99999874331                   12344677888899999999999999999999887778999999999888


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+..+.|+.+|.
T Consensus       147 ~~~~~~~y~~sk~  159 (246)
T PRK05653        147 GNPGQTNYSAAKA  159 (246)
T ss_pred             CCCCCcHhHhHHH
Confidence            8888888988874

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.92  E-value=1.8e-24  Score=160.74  Aligned_cols=150  Identities=31%  Similarity=0.389  Sum_probs=123.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH--HHHHHHHHhhcCC-CceeEEEeecCC-hhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR--GLEAVEKLKHSGF-DSVIFHQLDVAD-PATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~l~~~~~-~~~~~~~~Dv~~-~~~i~~~~~~~~~~~g   76 (174)
                      +++||||++|||+++|+.|+++|++|+++.++.+.  .+...+... ... ..+.+..+|+++ .++++.+++.+.+.+|
T Consensus         7 ~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g   85 (251)
T COG1028           7 VALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAAAEEEFG   85 (251)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            48999999999999999999999999888887553  222322222 221 257888899998 9999999999999999


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|++|||||.....                  .+..+.+.+++++++++|+.+++.+++.+.|.|+++   +||++||+
T Consensus        86 ~id~lvnnAg~~~~~------------------~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~  144 (251)
T COG1028          86 RIDILVNNAGIAGPD------------------APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSV  144 (251)
T ss_pred             CCCEEEECCCCCCCC------------------CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCc
Confidence            999999999985431                  124455668999999999999999999888888833   99999999


Q ss_pred             CCcccCCCC-cceeeecc
Q 035504          157 MGKLKNTWQ-GAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~-~~y~~~k~  173 (174)
                      .+. +.++. ..|+.+|+
T Consensus       145 ~~~-~~~~~~~~Y~~sK~  161 (251)
T COG1028         145 AGL-GGPPGQAAYAASKA  161 (251)
T ss_pred             hhc-CCCCCcchHHHHHH
Confidence            999 87774 99999985

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.9e-24  Score=160.13  Aligned_cols=147  Identities=23%  Similarity=0.314  Sum_probs=122.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|++++|+.+...+..+.....+ .++.++.+|++|.+++.+++.      +++|+
T Consensus         4 ~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~------~~id~   76 (257)
T PRK09291          4 TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRG-LALRVEKLDLTDAIDRAQAAE------WDVDV   76 (257)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcceEEEeeCCCHHHHHHHhc------CCCCE
Confidence            48999999999999999999999999999998766555554444443 348889999999998877653      37999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   +..+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..
T Consensus        77 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~  137 (257)
T PRK09291         77 LLNNAGIGEAG-------------------AVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI  137 (257)
T ss_pred             EEECCCcCCCc-------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc
Confidence            99999975321                   23455778888999999999999999999999888779999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       138 ~~~~~~~Y~~sK~  150 (257)
T PRK09291        138 TGPFTGAYCASKH  150 (257)
T ss_pred             CCCCcchhHHHHH
Confidence            8888899998885

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=4.6e-24  Score=158.54  Aligned_cols=151  Identities=26%  Similarity=0.282  Sum_probs=125.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+++||++++++|+++|+++++..++. +...+..+.+...+ .++.++.+|++++++++++++++.+.++++|
T Consensus         8 ~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   86 (252)
T PRK06077          8 VVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENG-GEGIGVLADVSTREGCETLAKATIDRYGVAD   86 (252)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcC-CeeEEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            589999999999999999999999988877643 33334444455443 3477889999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||...+.                   +..+.+.+.+++.+++|+.+++.+++++.|.|++.  ++||++||..+.
T Consensus        87 ~vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~  145 (252)
T PRK06077         87 ILVNNAGLGLFS-------------------PFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG--GAIVNIASVAGI  145 (252)
T ss_pred             EEEECCCCCCCC-------------------ChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--cEEEEEcchhcc
Confidence            999999974331                   12334566788889999999999999999999653  899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|.
T Consensus       146 ~~~~~~~~Y~~sK~  159 (252)
T PRK06077        146 RPAYGLSIYGAMKA  159 (252)
T ss_pred             CCCCCchHHHHHHH
Confidence            89899999999885

>PRK09135 pteridine reductase; Provisional

Probab=99.92  E-value=4.5e-24  Score=158.12  Aligned_cols=153  Identities=22%  Similarity=0.235  Sum_probs=126.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh-HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK-RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+++||+.++++|+++|++|++++|+.. ...+..+.++...+..+.++.+|++|++++.++++++.++++++|
T Consensus         8 ~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   87 (249)
T PRK09135          8 VALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLD   87 (249)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999999998643 344444555554445588899999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||...+.                   +..+.+.++++..+++|+.+++++.+++.|.|.++. +++++++|..+.
T Consensus        88 ~vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~~~~~~~~~~  147 (249)
T PRK09135         88 ALVNNASSFYPT-------------------PLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR-GAIVNITDIHAE  147 (249)
T ss_pred             EEEECCCCCCCC-------------------ChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC-eEEEEEeChhhc
Confidence            999999975431                   122335567888899999999999999999987664 889999998887


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       148 ~~~~~~~~Y~~sK~  161 (249)
T PRK09135        148 RPLKGYPVYCAAKA  161 (249)
T ss_pred             CCCCCchhHHHHHH
Confidence            77778889999885

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=4.6e-25  Score=151.03  Aligned_cols=156  Identities=24%  Similarity=0.263  Sum_probs=134.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +.+|||+.+|+|++.+.+|+.+|+.+++.+-......+.++++.    +++.+..+|++++++++.++.+.+.+||++|.
T Consensus        11 valvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg----~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen   11 VALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG----GKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             eEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC----CceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            47999999999999999999999999999987766677777663    46999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC------CCeEEEEe
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD------LPRIVNVS  154 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~------~g~iv~is  154 (174)
                      ++||||+.....             .-.+.+-...+.+++++.+++|++|+|++++....+|-++.      .|.||+..
T Consensus        87 ~vncagia~a~k-------------tyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviinta  153 (260)
T KOG1199|consen   87 LVNCAGIAYAFK-------------TYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTA  153 (260)
T ss_pred             eeeccceeeeee-------------eeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeec
Confidence            999999865321             12233345668899999999999999999999988886643      48899999


Q ss_pred             cCCCcccCCCCcceeeecc
Q 035504          155 SNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~~~~~~~~~~y~~~k~  173 (174)
                      |+++..+..++.+|+++|.
T Consensus       154 svaafdgq~gqaaysaskg  172 (260)
T KOG1199|consen  154 SVAAFDGQTGQAAYSASKG  172 (260)
T ss_pred             eeeeecCccchhhhhcccC
Confidence            9999999999999999984

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4e-24  Score=157.42  Aligned_cols=151  Identities=25%  Similarity=0.280  Sum_probs=128.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||||++++||..++++|+++|++|++++|+.+...+..+++...   ....+.+|++|.+++.++++++.+.++++|+
T Consensus         9 ~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          9 VVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD---ALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             EEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc---CceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            5899999999999999999999999999999876665655555433   3667789999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +||++|.....                   ...+.+.+++++.+++|+.+++.++++++|.|++++.++||++||..+..
T Consensus        86 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  146 (239)
T PRK12828         86 LVNIAGAFVWG-------------------TIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALK  146 (239)
T ss_pred             EEECCcccCcC-------------------ChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhcc
Confidence            99999974321                   12344677888889999999999999999999888789999999999888


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+.+|+
T Consensus       147 ~~~~~~~y~~sk~  159 (239)
T PRK12828        147 AGPGMGAYAAAKA  159 (239)
T ss_pred             CCCCcchhHHHHH
Confidence            8888888887774

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.92  E-value=8.6e-24  Score=156.35  Aligned_cols=153  Identities=27%  Similarity=0.340  Sum_probs=128.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|||++++||.+++++|+++|++|+++.|+... ..+...+++..+ .++.++.+|+++.+++.++++++.+.++++|
T Consensus         7 ~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   85 (248)
T PRK05557          7 VALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALG-GKALAVQGDVSDAESVERAVDEAKAEFGGVD   85 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999888876543 344445554433 4588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      .+|||+|.....                   ...+.+.+.+++.+++|+.+++.+.+.+++.+.+.+.++++++||..+.
T Consensus        86 ~vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~  146 (248)
T PRK05557         86 ILVNNAGITRDN-------------------LLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGL  146 (248)
T ss_pred             EEEECCCcCCCC-------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccC
Confidence            999999975321                   1234567888899999999999999999999988777899999999888


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|.
T Consensus       147 ~~~~~~~~y~~sk~  160 (248)
T PRK05557        147 MGNPGQANYAASKA  160 (248)
T ss_pred             cCCCCCchhHHHHH
Confidence            88888899988874

>PRK08324 short chain dehydrogenase; Validated

Probab=99.92  E-value=3.9e-24  Score=178.85  Aligned_cols=152  Identities=28%  Similarity=0.284  Sum_probs=133.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+...+..+++...  .++.++.+|++|+++++++++++.+.+|++|+
T Consensus       424 ~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~--~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDv  501 (681)
T PRK08324        424 VALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP--DRALGVACDVTDEAAVQAAFEEAALAFGGVDI  501 (681)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc--CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999987766666666543  35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC-CeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL-PRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~iv~isS~~~~  159 (174)
                      +|||||.....                   ...+.+.+++++.+++|+.+++.+++.+.|.|++++. |+||++||..+.
T Consensus       502 vI~~AG~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~  562 (681)
T PRK08324        502 VVSNAGIAISG-------------------PIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV  562 (681)
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc
Confidence            99999985321                   2345578889999999999999999999999988764 899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|.
T Consensus       563 ~~~~~~~~Y~asKa  576 (681)
T PRK08324        563 NPGPNFGAYGAAKA  576 (681)
T ss_pred             CCCCCcHHHHHHHH
Confidence            99899999999885

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.1e-24  Score=157.65  Aligned_cols=144  Identities=19%  Similarity=0.145  Sum_probs=118.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+..++..+    .. .++.++++|++|+++++++++++..   .+|.
T Consensus         3 ~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~-~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~   74 (240)
T PRK06101          3 AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QS-ANIFTLAFDVTDHPGTKAALSQLPF---IPEL   74 (240)
T ss_pred             EEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hc-CCCeEEEeeCCCHHHHHHHHHhccc---CCCE
Confidence            58999999999999999999999999999998665443322    22 3588899999999999999887642   4799


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   ...+.+.+++++++++|+.+++++++.+.|.|.+  .++||++||..+..
T Consensus        75 ~i~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~  133 (240)
T PRK06101         75 WIFNAGDCEYM-------------------DDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASEL  133 (240)
T ss_pred             EEEcCcccccC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhcc
Confidence            99999863211                   1123467888999999999999999999999954  37899999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       134 ~~~~~~~Y~asK~  146 (240)
T PRK06101        134 ALPRAEAYGASKA  146 (240)
T ss_pred             CCCCCchhhHHHH
Confidence            9999999999986

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=5.2e-24  Score=158.16  Aligned_cols=161  Identities=22%  Similarity=0.201  Sum_probs=129.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|||+++|||..+++.|+++|++|++++|+.+...+..+++...+ .++.++.+|+++.++++++++++.+.++++|.
T Consensus         7 ~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (253)
T PRK08217          7 VIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALG-TEVRGYAANVTDEEDVEATFAQIAEDFGQLNG   85 (253)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999999877666666666544 35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC-CCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS-DLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~isS~~~~  159 (174)
                      +|||+|......        .....+..  ...+.+.++++.++++|+.+++.+.+.++|.|.++ ..++|+++||. +.
T Consensus        86 vi~~ag~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~-~~  154 (253)
T PRK08217         86 LINNAGILRDGL--------LVKAKDGK--VTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI-AR  154 (253)
T ss_pred             EEECCCccCcCc--------cccccccc--ccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccc-cc
Confidence            999999743211        00000000  01455778899999999999999999999998665 45789999986 45


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       155 ~~~~~~~~Y~~sK~  168 (253)
T PRK08217        155 AGNMGQTNYSASKA  168 (253)
T ss_pred             cCCCCCchhHHHHH
Confidence            67778899999885

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.5e-24  Score=158.15  Aligned_cols=152  Identities=22%  Similarity=0.271  Sum_probs=123.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC--c
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK--L   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~--i   78 (174)
                      +++||||++|||++++++|+++|++|++++|+..+   ..+++.+..+.++.++.+|++|+++++++++++.+.++.  +
T Consensus         3 ~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          3 YVIITGTSQGLGEAIANQLLEKGTHVISISRTENK---ELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             EEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchH---HHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            48999999999999999999999999999997632   122222222345888999999999999999998887653  2


Q ss_pred             c--EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC-CCCeEEEEec
Q 035504           79 D--ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS-DLPRIVNVSS  155 (174)
Q Consensus        79 d--~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~isS  155 (174)
                      +  ++|+|+|...+.                  .++.+.+.+++.+.+++|+.+++.+++.++|.|++. ..++||++||
T Consensus        80 ~~~~~v~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS  141 (251)
T PRK06924         80 SSIHLINNAGMVAPI------------------KPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISS  141 (251)
T ss_pred             CceEEEEcceecccC------------------cccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecc
Confidence            2  899999975331                  123456788899999999999999999999999775 3579999999


Q ss_pred             CCCcccCCCCcceeeecc
Q 035504          156 NMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       156 ~~~~~~~~~~~~y~~~k~  173 (174)
                      ..+..+.++...|+.+|+
T Consensus       142 ~~~~~~~~~~~~Y~~sKa  159 (251)
T PRK06924        142 GAAKNPYFGWSAYCSSKA  159 (251)
T ss_pred             hhhcCCCCCcHHHhHHHH
Confidence            999888888999999885

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1e-23  Score=157.61  Aligned_cols=152  Identities=30%  Similarity=0.353  Sum_probs=127.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+++||+.++++|+++|++|++++|+.+...+..+++...   ++.++.+|++|++++.++++++.+.++++|+
T Consensus        13 ~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (264)
T PRK12829         13 RVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA---KVTATVADVADPAQVERVFDTAVERFGGLDV   89 (264)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC---ceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5899999999999999999999999999999876555544444321   4788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC-CeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL-PRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~iv~isS~~~~  159 (174)
                      ||||+|...+.                  ......+.+++.+.+++|+.+++.+++.+++.|++.+. ++|+++||..+.
T Consensus        90 vi~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~  151 (264)
T PRK12829         90 LVNNAGIAGPT------------------GGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR  151 (264)
T ss_pred             EEECCCCCCCC------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc
Confidence            99999975321                  12334567888999999999999999999999877665 789999999988


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+.+|.
T Consensus       152 ~~~~~~~~y~~~K~  165 (264)
T PRK12829        152 LGYPGRTPYAASKW  165 (264)
T ss_pred             cCCCCCchhHHHHH
Confidence            88888888988874

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.1e-23  Score=157.03  Aligned_cols=150  Identities=20%  Similarity=0.129  Sum_probs=125.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+++||.+++++|+++|++|++++|+.+..++..+++.   ..++.++.+|+.|.+++.++++++.++++++|+
T Consensus         4 ~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          4 TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG---DARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             EEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998776666655552   235888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|...+.                   ...+.+.+++.+.+++|+.+++.+.+++++.|.+++.++||++||..+..
T Consensus        81 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  141 (257)
T PRK07074         81 LVANAGAARAA-------------------SLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA  141 (257)
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC
Confidence            99999975421                   12345678888889999999999999999999887779999999987654


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      + .+...|+.+|.
T Consensus       142 ~-~~~~~y~~sK~  153 (257)
T PRK07074        142 A-LGHPAYSAAKA  153 (257)
T ss_pred             C-CCCcccHHHHH
Confidence            3 34567887774

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.5e-23  Score=154.99  Aligned_cols=153  Identities=28%  Similarity=0.347  Sum_probs=127.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+++||.+++++|+++|++|+++.|+... .....+.+...+ .++.++.+|++|.+++.++++++.+.++++|
T Consensus         8 ~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   86 (249)
T PRK12825          8 VALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALG-RRAQAVQADVTDKAALEAAVAAAVERFGRID   86 (249)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC-CceEEEECCcCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999998887765443 333444444433 3588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++||++|...+.                   ...+.+.+++++.+++|+.+++++++.+.|+|++.+.+++|++||..+.
T Consensus        87 ~vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~  147 (249)
T PRK12825         87 ILVNNAGIFEDK-------------------PLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGL  147 (249)
T ss_pred             EEEECCccCCCC-------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccC
Confidence            999999964321                   1234467788899999999999999999999988888999999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+.+|.
T Consensus       148 ~~~~~~~~y~~sK~  161 (249)
T PRK12825        148 PGWPGRSNYAAAKA  161 (249)
T ss_pred             CCCCCchHHHHHHH
Confidence            88888888988874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=7.8e-24  Score=169.74  Aligned_cols=150  Identities=29%  Similarity=0.288  Sum_probs=123.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||.+++++|+++|++|+++++....  +..+++.+..  +..++.+|++|+++++++++++.++++++|+
T Consensus       212 ~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--~~l~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        212 VALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRV--GGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHHc--CCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            48999999999999999999999999999885321  1122222211  2457899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+....                   .+.+.+.++++.++++|+.+++++.+.+.+.+..++.++||++||..+..
T Consensus       288 vi~~AG~~~~~-------------------~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~  348 (450)
T PRK08261        288 VVHNAGITRDK-------------------TLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA  348 (450)
T ss_pred             EEECCCcCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC
Confidence            99999985321                   23456778899999999999999999999965555668999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+++..|+.+|+
T Consensus       349 g~~~~~~Y~asKa  361 (450)
T PRK08261        349 GNRGQTNYAASKA  361 (450)
T ss_pred             CCCCChHHHHHHH
Confidence            9999999999985

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=7.9e-24  Score=155.90  Aligned_cols=139  Identities=22%  Similarity=0.245  Sum_probs=116.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+....      .    ..++.++.+|++++      ++++.+.++++|+
T Consensus         7 ~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~----~~~~~~~~~D~~~~------~~~~~~~~~~id~   70 (235)
T PRK06550          7 TVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L----SGNFHFLQLDLSDD------LEPLFDWVPSVDI   70 (235)
T ss_pred             EEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c----CCcEEEEECChHHH------HHHHHHhhCCCCE
Confidence            489999999999999999999999999999875321      0    13588899999887      4555567789999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|.....                  ....+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        71 lv~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  132 (235)
T PRK06550         71 LCNTAGILDDY------------------KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV  132 (235)
T ss_pred             EEECCCCCCCC------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc
Confidence            99999874211                  123455778899999999999999999999999888789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       133 ~~~~~~~Y~~sK~  145 (235)
T PRK06550        133 AGGGGAAYTASKH  145 (235)
T ss_pred             CCCCCcccHHHHH
Confidence            8889999999885

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.91  E-value=2.4e-23  Score=147.99  Aligned_cols=152  Identities=28%  Similarity=0.386  Sum_probs=117.1

Q ss_pred             EEEecCCCchhHHHHHHHHHC-CCeEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhh--cCC
Q 035504            2 AVVTGANKGIGYETVRQLASN-GIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQ--FGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~-g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~--~g~   77 (174)
                      ++||||+||||+.++++|+.. |-++++..+ +++.+.+..+ +....-.+++.++.|+++.++++++++++.+.  ..+
T Consensus         6 v~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~-~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~G   84 (249)
T KOG1611|consen    6 VFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELA-LKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDG   84 (249)
T ss_pred             EEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHH-HhhccCCceEEEEEecccHHHHHHHHHHHHhhcccCC
Confidence            799999999999999999986 666655544 4554422222 22222347999999999999999999999997  558


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC----------
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL----------  147 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~----------  147 (174)
                      +|++|||||+...-                  ....+.+-+.|.+++++|..|++.++|+++|++++...          
T Consensus        85 lnlLinNaGi~~~y------------------~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~  146 (249)
T KOG1611|consen   85 LNLLINNAGIALSY------------------NTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVS  146 (249)
T ss_pred             ceEEEeccceeeec------------------ccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCccccc
Confidence            99999999996432                  23345566778899999999999999999999988653          


Q ss_pred             -CeEEEEecCCCcccC---CCCcceeeec
Q 035504          148 -PRIVNVSSNMGKLKN---TWQGAICYLT  172 (174)
Q Consensus       148 -g~iv~isS~~~~~~~---~~~~~y~~~k  172 (174)
                       +.|||+||..+.++.   ....+|-.||
T Consensus       147 raaIinisS~~~s~~~~~~~~~~AYrmSK  175 (249)
T KOG1611|consen  147 RAAIINISSSAGSIGGFRPGGLSAYRMSK  175 (249)
T ss_pred             ceeEEEeeccccccCCCCCcchhhhHhhH
Confidence             379999999887743   2446666666

>PRK12742 oxidoreductase; Provisional

Probab=99.90  E-value=7.3e-23  Score=150.85  Aligned_cols=142  Identities=20%  Similarity=0.203  Sum_probs=112.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++++ .+..++..+++      +..++.+|++|++++.++++    .++++|
T Consensus         8 ~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~------~~~~~~~D~~~~~~~~~~~~----~~~~id   77 (237)
T PRK12742          8 KVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET------GATAVQTDSADRDAVIDVVR----KSGALD   77 (237)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh------CCeEEecCCCCHHHHHHHHH----HhCCCc
Confidence            48999999999999999999999999888764 33333332222      25678899999988877664    457899


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....                   ...+.+.+++++++++|+.+++.+++.++|.|++  .|+||++||..+.
T Consensus        78 ~li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~  136 (237)
T PRK12742         78 ILVVNAGIAVFG-------------------DALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGD  136 (237)
T ss_pred             EEEECCCCCCCC-------------------CcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccc
Confidence            999999974321                   1234577889999999999999999999999964  3899999999884


Q ss_pred             -ccCCCCcceeeecc
Q 035504          160 -LKNTWQGAICYLTF  173 (174)
Q Consensus       160 -~~~~~~~~y~~~k~  173 (174)
                       .+.++...|+.+|+
T Consensus       137 ~~~~~~~~~Y~~sKa  151 (237)
T PRK12742        137 RMPVAGMAAYAASKS  151 (237)
T ss_pred             cCCCCCCcchHHhHH
Confidence             46778889999885

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-23  Score=150.82  Aligned_cols=129  Identities=21%  Similarity=0.191  Sum_probs=111.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++ ++|++++|+..                  .+++|++|++++++++++    ++++|+
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~----~~~id~   58 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------DVQVDITDPASIRALFEK----VGKVDA   58 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------ceEecCCChHHHHHHHHh----cCCCCE
Confidence            4899999999999999999999 99999998742                  368999999999888764    578999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||...+                   .+..+.+.+++++.+++|+.+++++++.+.|+|++.  |+|+++||..+..
T Consensus        59 lv~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g~iv~iss~~~~~  117 (199)
T PRK07578         59 VVSAAGKVHF-------------------APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG--GSFTLTSGILSDE  117 (199)
T ss_pred             EEECCCCCCC-------------------CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CeEEEEcccccCC
Confidence            9999997432                   123455778899999999999999999999999643  8999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       118 ~~~~~~~Y~~sK~  130 (199)
T PRK07578        118 PIPGGASAATVNG  130 (199)
T ss_pred             CCCCchHHHHHHH
Confidence            8899999999986

>PRK08017 oxidoreductase; Provisional

Probab=99.90  E-value=6.5e-23  Score=152.74  Aligned_cols=147  Identities=26%  Similarity=0.326  Sum_probs=124.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc-CCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF-GKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-g~id   79 (174)
                      +++||||++|||.++++.|+++|++|++++|+.+..+..    ...   ++..+.+|++|.+++.++++++.+.. +++|
T Consensus         4 ~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~~---~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          4 SVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NSL---GFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----HhC---CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            489999999999999999999999999999986544332    221   36788999999999999999887754 7899


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      .+|||+|....                   .+..+.+.+++++.+++|+.|++++++.++|.|++.+.++||++||..+.
T Consensus        77 ~ii~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~  137 (256)
T PRK08017         77 GLFNNAGFGVY-------------------GPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGL  137 (256)
T ss_pred             EEEECCCCCCc-------------------cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccc
Confidence            99999986432                   12345577888999999999999999999999988888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+.+|.
T Consensus       138 ~~~~~~~~Y~~sK~  151 (256)
T PRK08017        138 ISTPGRGAYAASKY  151 (256)
T ss_pred             cCCCCccHHHHHHH
Confidence            99899999998885

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3e-23  Score=152.38  Aligned_cols=142  Identities=20%  Similarity=0.203  Sum_probs=117.6

Q ss_pred             EEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEE
Q 035504            3 VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILV   82 (174)
Q Consensus         3 litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li   82 (174)
                      |||||++|||++++++|+++|++|++++|+.+...+..++++.  +.++.++.+|++|++++.+++++    .+++|++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li   74 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG--GAPVRTAALDITDEAAVDAFFAE----AGPFDHVV   74 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHh----cCCCCEEE
Confidence            6999999999999999999999999999987766665555542  24588899999999999888775    47899999


Q ss_pred             ecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcccC
Q 035504           83 NNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN  162 (174)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  162 (174)
                      ||+|.....                   +..+.+.+++++.+++|+.+++++++  .+.|.  +.|+||++||..+..+.
T Consensus        75 ~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~  131 (230)
T PRK07041         75 ITAADTPGG-------------------PVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPS  131 (230)
T ss_pred             ECCCCCCCC-------------------ChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCC
Confidence            999974321                   22345778889999999999999999  44553  45899999999999888


Q ss_pred             CCCcceeeecc
Q 035504          163 TWQGAICYLTF  173 (174)
Q Consensus       163 ~~~~~y~~~k~  173 (174)
                      ++...|+.+|+
T Consensus       132 ~~~~~Y~~sK~  142 (230)
T PRK07041        132 ASGVLQGAINA  142 (230)
T ss_pred             CcchHHHHHHH
Confidence            89999999886

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.1e-23  Score=151.95  Aligned_cols=140  Identities=21%  Similarity=0.194  Sum_probs=118.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+++||.+++++|+++|++|++++|+.+.      ..      ...++.+|++|+++++++++++.+.+ ++|+
T Consensus         5 ~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~~------~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~   71 (234)
T PRK07577          5 TVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------DF------PGELFACDLADIEQTAATLAQINEIH-PVDA   71 (234)
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------cc------CceEEEeeCCCHHHHHHHHHHHHHhC-CCcE
Confidence            48999999999999999999999999999998643      00      12467999999999999999998877 5899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|...+.                   +..+.+.+++.+.+++|+.+++.+.++++|.|++++.|+||++||.. ..
T Consensus        72 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~  131 (234)
T PRK07577         72 IVNNVGIALPQ-------------------PLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IF  131 (234)
T ss_pred             EEECCCCCCCC-------------------ChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-cc
Confidence            99999985431                   12345678889999999999999999999999888789999999985 45


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+.+|.
T Consensus       132 ~~~~~~~Y~~sK~  144 (234)
T PRK07577        132 GALDRTSYSAAKS  144 (234)
T ss_pred             CCCCchHHHHHHH
Confidence            6778889999885

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.90  E-value=5.3e-23  Score=148.47  Aligned_cols=171  Identities=23%  Similarity=0.249  Sum_probs=135.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-----eEEEEeeChhHHHHHHHHHhhcCCC---ceeEEEeecCChhhHHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-----IVVLTARDEKRGLEAVEKLKHSGFD---SVIFHQLDVADPATIHSLADFVR   72 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-----~v~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~Dv~~~~~i~~~~~~~~   72 (174)
                      +++|||+++|||.++|++|++...     .+++++|+.+++++.++++.+.+++   ++..+.+|+++..++.++..+++
T Consensus         5 valITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~   84 (341)
T KOG1478|consen    5 VALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIK   84 (341)
T ss_pred             EEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHH
Confidence            589999999999999999999753     4788999999999999999998874   58889999999999999999999


Q ss_pred             hhcCCccEEEecccccCccCCCCCcccccc---------CCCCc-ccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhc
Q 035504           73 SQFGKLDILVNNAAIFGVSVDGDALSGFVK---------DGEPI-KWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLL  142 (174)
Q Consensus        73 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m  142 (174)
                      ++|.++|.++.|||++..+.  -.|-..+.         -.+|. .....-..+.|++...|++|++|++++.+.+.|++
T Consensus        85 ~rf~~ld~iylNAg~~~~~g--i~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   85 QRFQRLDYIYLNAGIMPNPG--INWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHhhhccEEEEccccCCCCc--ccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            99999999999999976542  11111110         11111 11111246778899999999999999999999999


Q ss_pred             cCCCCCeEEEEecCCCcccC---------CCCcceeeecc
Q 035504          143 QLSDLPRIVNVSSNMGKLKN---------TWQGAICYLTF  173 (174)
Q Consensus       143 ~~~~~g~iv~isS~~~~~~~---------~~~~~y~~~k~  173 (174)
                      ..++...+|++||..+.-.+         .+-.+|..||.
T Consensus       163 ~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKr  202 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKR  202 (341)
T ss_pred             hcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHH
Confidence            99887799999999876433         34566776664

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=1.9e-23  Score=148.54  Aligned_cols=149  Identities=24%  Similarity=0.296  Sum_probs=116.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChh---HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEK---RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      |+|||||.+|||..+++.|+++|. ++++++|+..   ...+..+++++.+ .++.++++|++|+++++++++++.+.++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g-~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAG-ARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT--EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCC-CceeeeccCccCHHHHHHHHHHHHhccC
Confidence            589999999999999999999975 7999999832   3445677777765 4699999999999999999999999999


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      +|+.+||+||....                   ..+.+.+.++++..+...+.|..+|.+.+    ...+...+|++||+
T Consensus        81 ~i~gVih~ag~~~~-------------------~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~----~~~~l~~~i~~SSi  137 (181)
T PF08659_consen   81 PIDGVIHAAGVLAD-------------------APIQDQTPDEFDAVLAPKVRGLWNLHEAL----ENRPLDFFILFSSI  137 (181)
T ss_dssp             -EEEEEE--------------------------B-GCC--HHHHHHHHHHHHHHHHHHHHHH----TTTTTSEEEEEEEH
T ss_pred             Ccceeeeeeeeecc-------------------cccccCCHHHHHHHHhhhhhHHHHHHHHh----hcCCCCeEEEECCh
Confidence            99999999998542                   13456688999999999999999999988    44566899999999


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      ++..+.+++..|+++..
T Consensus       138 s~~~G~~gq~~YaaAN~  154 (181)
T PF08659_consen  138 SSLLGGPGQSAYAAANA  154 (181)
T ss_dssp             HHHTT-TTBHHHHHHHH
T ss_pred             hHhccCcchHhHHHHHH
Confidence            99999999999988754

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.90  E-value=1e-22  Score=149.99  Aligned_cols=147  Identities=23%  Similarity=0.262  Sum_probs=112.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||++|||++++++|+++|  ..|++..|+...  +    .   ...++.++++|++|.++++++    .++++++
T Consensus         2 ~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~----~---~~~~~~~~~~Dls~~~~~~~~----~~~~~~i   68 (235)
T PRK09009          2 NILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D----F---QHDNVQWHALDVTDEAEIKQL----SEQFTQL   68 (235)
T ss_pred             EEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c----c---ccCceEEEEecCCCHHHHHHH----HHhcCCC
Confidence            48999999999999999999985  566666665321  1    1   123588899999999988774    4567899


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||......             ......+.+.+.+++.+.+++|+.+++.+++.++|.|++++.++|+++||..+
T Consensus        69 d~li~~aG~~~~~~-------------~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~  135 (235)
T PRK09009         69 DWLINCVGMLHTQD-------------KGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG  135 (235)
T ss_pred             CEEEECCccccccc-------------cCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc
Confidence            99999999854211             00112344567788999999999999999999999998887789999999776


Q ss_pred             ccc---CCCCcceeeecc
Q 035504          159 KLK---NTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~---~~~~~~y~~~k~  173 (174)
                      ...   .++...|+.+|+
T Consensus       136 ~~~~~~~~~~~~Y~asK~  153 (235)
T PRK09009        136 SISDNRLGGWYSYRASKA  153 (235)
T ss_pred             ccccCCCCCcchhhhhHH
Confidence            542   345678998885

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.90  E-value=8.5e-24  Score=144.88  Aligned_cols=146  Identities=25%  Similarity=0.183  Sum_probs=123.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .+++||+..|||+++++.|++.|++|+.+.|++..+..+.++.    +.-+..+..|+++++.+.+.+.    ..+++|.
T Consensus         9 ~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~----p~~I~Pi~~Dls~wea~~~~l~----~v~pidg   80 (245)
T KOG1207|consen    9 IVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET----PSLIIPIVGDLSAWEALFKLLV----PVFPIDG   80 (245)
T ss_pred             EEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC----CcceeeeEecccHHHHHHHhhc----ccCchhh
Confidence            3789999999999999999999999999999987766665554    2348889999999887776655    4468999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhh-ccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPL-LQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-m~~~~~g~iv~isS~~~~  159 (174)
                      ++||||+.-.                   .++.+.+.+++++.|++|+.++++.+|...+- +.++.+|.||++||.++.
T Consensus        81 LVNNAgvA~~-------------------~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~  141 (245)
T KOG1207|consen   81 LVNNAGVATN-------------------HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI  141 (245)
T ss_pred             hhccchhhhc-------------------chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc
Confidence            9999998432                   34667789999999999999999999996664 444557999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+..+...||++|.
T Consensus       142 R~~~nHtvYcatKa  155 (245)
T KOG1207|consen  142 RPLDNHTVYCATKA  155 (245)
T ss_pred             cccCCceEEeecHH
Confidence            99999999999984

>PRK08264 short chain dehydrogenase; Validated

Probab=99.89  E-value=1.4e-22  Score=149.53  Aligned_cols=143  Identities=32%  Similarity=0.382  Sum_probs=119.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||+++||.++|++|+++|+ +|++++|+.+...+        .+.++.++.+|++|.++++++++.    ++++|
T Consensus         8 ~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~----~~~id   75 (238)
T PRK08264          8 VVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVPLQLDVTDPASVAAAAEA----ASDVT   75 (238)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cCCceEEEEecCCCHHHHHHHHHh----cCCCC
Confidence            489999999999999999999999 99999998654332        224588999999999998877764    46899


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++||++|.....                  ....+.+.+++.+.+++|+.+++.+.+++.|.|++.+.+++|++||..+.
T Consensus        76 ~vi~~ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~  137 (238)
T PRK08264         76 ILVNNAGIFRTG------------------SLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSW  137 (238)
T ss_pred             EEEECCCcCCCC------------------CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc
Confidence            999999973321                  12345577888999999999999999999999988878999999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|.
T Consensus       138 ~~~~~~~~y~~sK~  151 (238)
T PRK08264        138 VNFPNLGTYSASKA  151 (238)
T ss_pred             cCCCCchHhHHHHH
Confidence            88888888887774

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-22  Score=149.19  Aligned_cols=147  Identities=22%  Similarity=0.276  Sum_probs=116.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+...+. +++     .++.+..+|++|+++++++++++.+  +++|+
T Consensus         3 ~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~   74 (225)
T PRK08177          3 TALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QAL-----PGVHIEKLDMNDPASLDQLLQRLQG--QRFDL   74 (225)
T ss_pred             EEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hhc-----cccceEEcCCCCHHHHHHHHHHhhc--CCCCE
Confidence            489999999999999999999999999999987654332 222     2477889999999999999988753  47999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|...+..                 .+..+.+.+++++.+++|+.+++.+++.++|.|++. .++++++||..+..
T Consensus        75 vi~~ag~~~~~~-----------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~  136 (225)
T PRK08177         75 LFVNAGISGPAH-----------------QSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSV  136 (225)
T ss_pred             EEEcCcccCCCC-----------------CCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCcccc
Confidence            999999853211                 123445778888999999999999999999999754 48999999988866


Q ss_pred             cC---CCCcceeeecc
Q 035504          161 KN---TWQGAICYLTF  173 (174)
Q Consensus       161 ~~---~~~~~y~~~k~  173 (174)
                      +.   .....|+.+|.
T Consensus       137 ~~~~~~~~~~Y~~sK~  152 (225)
T PRK08177        137 ELPDGGEMPLYKASKA  152 (225)
T ss_pred             ccCCCCCccchHHHHH
Confidence            43   24567888774

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.2e-22  Score=146.39  Aligned_cols=146  Identities=29%  Similarity=0.345  Sum_probs=115.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+++||.+++++|+++|++|++++|+.+..++    +...   ++.++.+|++|.++++++++++..  +++|+
T Consensus         3 ~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~----~~~~---~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~   73 (222)
T PRK06953          3 TVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA----LQAL---GAEALALDVADPASVAGLAWKLDG--EALDA   73 (222)
T ss_pred             eEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH----HHhc---cceEEEecCCCHHHHHHHHHHhcC--CCCCE
Confidence            58999999999999999999999999999998654433    2222   256789999999999988776632  47999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|......                 ....+.+.+++++.+++|+.+++.+++++.|.|++. .|+++++||..+..
T Consensus        74 vi~~ag~~~~~~-----------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~  135 (222)
T PRK06953         74 AVYVAGVYGPRT-----------------EGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSI  135 (222)
T ss_pred             EEECCCcccCCC-----------------CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCccccc
Confidence            999999753211                 112345778899999999999999999999999665 48999999998877


Q ss_pred             cCCCCc---ceeeecc
Q 035504          161 KNTWQG---AICYLTF  173 (174)
Q Consensus       161 ~~~~~~---~y~~~k~  173 (174)
                      +.....   .|+.+|+
T Consensus       136 ~~~~~~~~~~Y~~sK~  151 (222)
T PRK06953        136 GDATGTTGWLYRASKA  151 (222)
T ss_pred             ccccCCCccccHHhHH
Confidence            643322   5888875

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.5e-22  Score=150.31  Aligned_cols=137  Identities=16%  Similarity=0.112  Sum_probs=102.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.+++++|+++|++|++++|+..+..+  ..  ... . ...+.+|++|.+++.+       .++++|+
T Consensus        16 ~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~~--~~~-~-~~~~~~D~~~~~~~~~-------~~~~iDi   82 (245)
T PRK12367         16 RIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--SN--DES-P-NEWIKWECGKEESLDK-------QLASLDV   82 (245)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--hh--ccC-C-CeEEEeeCCCHHHHHH-------hcCCCCE
Confidence            48999999999999999999999999999987532111  11  111 1 3567899999987653       4578999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC---CCCeEEEEecCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS---DLPRIVNVSSNM  157 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~---~~g~iv~isS~~  157 (174)
                      +|||||....                      .+.+.+++++.+++|+.++++++|.++|.|+++   +++.++..||..
T Consensus        83 lVnnAG~~~~----------------------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a  140 (245)
T PRK12367         83 LILNHGINPG----------------------GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEA  140 (245)
T ss_pred             EEECCccCCc----------------------CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEeccc
Confidence            9999997321                      123578889999999999999999999999763   223455556655


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+ +..+.|+++|+
T Consensus       141 ~~~~-~~~~~Y~aSKa  155 (245)
T PRK12367        141 EIQP-ALSPSYEISKR  155 (245)
T ss_pred             ccCC-CCCchhHHHHH
Confidence            5444 46678999986

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.8e-22  Score=149.35  Aligned_cols=144  Identities=27%  Similarity=0.224  Sum_probs=118.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|||++++||..+++.|+++|++|++++|+.+...+..+..      +..++.+|++|.+++++++++    ++++|+
T Consensus        11 ~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~----~~~~d~   80 (245)
T PRK07060         11 SVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET------GCEPLRLDVGDDAAIRAALAA----AGAFDG   80 (245)
T ss_pred             EEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCeEEEecCCCHHHHHHHHHH----hCCCCE
Confidence            4899999999999999999999999999999876544433322      256788999999988877664    578999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||+|.....                   ...+.+.+++++.+++|+.+++.+++++++.|++++ .++||++||..+.
T Consensus        81 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~  141 (245)
T PRK07060         81 LVNCAGIASLE-------------------SALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAAL  141 (245)
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHc
Confidence            99999984321                   223456778889999999999999999999987554 4899999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+.+|+
T Consensus       142 ~~~~~~~~y~~sK~  155 (245)
T PRK07060        142 VGLPDHLAYCASKA  155 (245)
T ss_pred             CCCCCCcHhHHHHH
Confidence            88888899998885

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.5e-22  Score=150.16  Aligned_cols=145  Identities=27%  Similarity=0.358  Sum_probs=113.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh-HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK-RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||++|||.+++++|+++|++|++++|+.+ ..++...+++..+ .++.++.+|++|.++++++++++.++++++|
T Consensus         8 ~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   86 (248)
T PRK07806          8 TALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAG-GRASAVGADLTDEESVAALMDTAREEFGGLD   86 (248)
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHhCCCCc
Confidence            4899999999999999999999999999998753 3444455555543 3588899999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....              ...           +...+++|+.+++++++.+.|+|.+  .++||++||..+.
T Consensus        87 ~vi~~ag~~~~~--------------~~~-----------~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~  139 (248)
T PRK07806         87 ALVLNASGGMES--------------GMD-----------EDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAH  139 (248)
T ss_pred             EEEECCCCCCCC--------------CCC-----------cceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhh
Confidence            999999863210              001           1234899999999999999999964  3799999997553


Q ss_pred             c-----cCCCCcceeeecc
Q 035504          160 L-----KNTWQGAICYLTF  173 (174)
Q Consensus       160 ~-----~~~~~~~y~~~k~  173 (174)
                      .     +.|....|+.+|.
T Consensus       140 ~~~~~~~~~~~~~Y~~sK~  158 (248)
T PRK07806        140 FIPTVKTMPEYEPVARSKR  158 (248)
T ss_pred             cCccccCCccccHHHHHHH
Confidence            2     2344567777774

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.88  E-value=3.1e-22  Score=140.49  Aligned_cols=149  Identities=25%  Similarity=0.246  Sum_probs=120.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHH---HHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEA---VEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +++||||++|||.+++++|+++|+ .|++++|+.+...+.   .+++++.+ .++.++.+|++++++++++++++.+.++
T Consensus         2 ~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        2 TYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALG-AEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             EEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            479999999999999999999997 588888865433222   24454443 4588899999999999999999999999


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|.+|||+|.....                   ...+.+.+++++.+++|+.+++.+.+.+    ++.+.++++++||.
T Consensus        81 ~id~li~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~ii~~ss~  137 (180)
T smart00822       81 PLRGVIHAAGVLDDG-------------------LLANLTPERFAAVLAPKVDGAWNLHELT----RDLPLDFFVLFSSV  137 (180)
T ss_pred             CeeEEEEccccCCcc-------------------ccccCCHHHHHHhhchHhHHHHHHHHHh----ccCCcceEEEEccH
Confidence            999999999974321                   1234466778888999999999999988    34456899999999


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      .+..+.++...|+.+|.
T Consensus       138 ~~~~~~~~~~~y~~sk~  154 (180)
T smart00822      138 AGVLGNPGQANYAAANA  154 (180)
T ss_pred             HHhcCCCCchhhHHHHH
Confidence            99988888888888774

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.88  E-value=3.4e-22  Score=182.33  Aligned_cols=148  Identities=20%  Similarity=0.191  Sum_probs=121.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChh---------------------------------------------
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEK---------------------------------------------   34 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~---------------------------------------------   34 (174)
                      ++|||||++|||.++|++|+++ |++|++++|+..                                             
T Consensus      1999 vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~ 2078 (2582)
T TIGR02813      1999 VFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLS 2078 (2582)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccch
Confidence            5899999999999999999998 699999999820                                             


Q ss_pred             --HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccc
Q 035504           35 --RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEI  112 (174)
Q Consensus        35 --~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (174)
                        +..+..+++.+.+ .++.++.+|++|.++++++++++.+. ++||+||||||+...                   ..+
T Consensus      2079 ~~ei~~~la~l~~~G-~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~-------------------~~i 2137 (2582)
T TIGR02813      2079 SLEIAQALAAFKAAG-ASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLAD-------------------KHI 2137 (2582)
T ss_pred             hHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCC-------------------CCc
Confidence              1111223333333 45889999999999999999999887 689999999998532                   134


Q ss_pred             cccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcccCCCCcceeeecc
Q 035504          113 VTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       113 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      .+.+.++|+++|++|+.|.+++++++.+.+.    ++||++||+.|..+++++..|+++|.
T Consensus      2138 ~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~~----~~IV~~SSvag~~G~~gqs~YaaAka 2194 (2582)
T TIGR02813      2138 QDKTLEEFNAVYGTKVDGLLSLLAALNAENI----KLLALFSSAAGFYGNTGQSDYAMSND 2194 (2582)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHhCC----CeEEEEechhhcCCCCCcHHHHHHHH
Confidence            5668899999999999999999999866542    57999999999999999999999985

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=1.3e-21  Score=144.29  Aligned_cols=148  Identities=17%  Similarity=0.171  Sum_probs=121.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.++++.|+++|++|++++|+.+...+..+++...+  ++.++++|++++++++++++++.+.++++|.
T Consensus         7 ~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   84 (238)
T PRK05786          7 KVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG--NIHYVVGDVSSTESARNVIEKAAKVLNAIDG   84 (238)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999998776655545554332  4888999999999999999999988999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|+|+|.....                   ...  ..+++++++++|+.+++.+.+.++|.|++  .+++|++||..+..
T Consensus        85 ii~~ag~~~~~-------------------~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~  141 (238)
T PRK05786         85 LVVTVGGYVED-------------------TVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIY  141 (238)
T ss_pred             EEEcCCCcCCC-------------------chH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcc
Confidence            99999863211                   011  12778899999999999999999999864  38999999988754


Q ss_pred             -cCCCCcceeeecc
Q 035504          161 -KNTWQGAICYLTF  173 (174)
Q Consensus       161 -~~~~~~~y~~~k~  173 (174)
                       +.+....|+.+|+
T Consensus       142 ~~~~~~~~Y~~sK~  155 (238)
T PRK05786        142 KASPDQLSYAVAKA  155 (238)
T ss_pred             cCCCCchHHHHHHH
Confidence             5566678888875

>PRK06720 hypothetical protein; Provisional

Probab=99.87  E-value=8.1e-21  Score=133.37  Aligned_cols=139  Identities=20%  Similarity=0.289  Sum_probs=109.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||.++++.|+++|++|++++|+.+..++..+++...+ .+..++.+|+++.++++++++++.+.+|++|+
T Consensus        18 ~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDi   96 (169)
T PRK06720         18 VAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLG-GEALFVSYDMEKQGDWQRVISITLNAFSRIDM   96 (169)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999998776666667776444 34778899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-------CCeEEEE
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-------LPRIVNV  153 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-------~g~iv~i  153 (174)
                      +|||||.....++       ++           +.+.++ ++  .+|+.+++..++.+.+.|.+++       .||+..+
T Consensus        97 lVnnAG~~~~~~~-------~~-----------~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (169)
T PRK06720         97 LFQNAGLYKIDSI-------FS-----------RQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGII  155 (169)
T ss_pred             EEECCCcCCCCCc-------cc-----------ccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEe
Confidence            9999998543211       11           112222 22  6777788889999888876654       5899999


Q ss_pred             ecCCCccc
Q 035504          154 SSNMGKLK  161 (174)
Q Consensus       154 sS~~~~~~  161 (174)
                      ||....+.
T Consensus       156 ~~~~~~~~  163 (169)
T PRK06720        156 GTKGQSFH  163 (169)
T ss_pred             ccccccce
Confidence            99877654

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.86  E-value=4.3e-21  Score=150.93  Aligned_cols=138  Identities=20%  Similarity=0.196  Sum_probs=104.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++++|+++|++|++++|+.+...+.   +.... .++..+.+|++|++++.+.       ++++|+
T Consensus       180 ~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~~-~~v~~v~~Dvsd~~~v~~~-------l~~IDi  248 (406)
T PRK07424        180 TVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGED-LPVKTLHWQVGQEAALAEL-------LEKVDI  248 (406)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HhhcC-CCeEEEEeeCCCHHHHHHH-------hCCCCE
Confidence            479999999999999999999999999999886543322   22211 2367789999999877654       358999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC----CeEEEEecC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL----PRIVNVSSN  156 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~----g~iv~isS~  156 (174)
                      +|||||....                      .+.+.+++++++++|+.|+++++++++|.|++++.    +.+|++|+ 
T Consensus       249 LInnAGi~~~----------------------~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-  305 (406)
T PRK07424        249 LIINHGINVH----------------------GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-  305 (406)
T ss_pred             EEECCCcCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-
Confidence            9999997321                      13467888999999999999999999999977642    34566654 


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      ++ .+.+..+.|+++|+
T Consensus       306 a~-~~~~~~~~Y~ASKa  321 (406)
T PRK07424        306 AE-VNPAFSPLYELSKR  321 (406)
T ss_pred             cc-ccCCCchHHHHHHH
Confidence            33 33345578999985

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.6e-21  Score=139.11  Aligned_cols=143  Identities=27%  Similarity=0.402  Sum_probs=117.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+++||..+++.|+++ ++|++++|+.+...+..++.     ..+.++.+|++|++++++++++    ++++|.
T Consensus         5 ~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~----~~~id~   74 (227)
T PRK08219          5 TALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-----PGATPFPVDLTDPEAIAAAVEQ----LGRLDV   74 (227)
T ss_pred             EEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-----ccceEEecCCCCHHHHHHHHHh----cCCCCE
Confidence            4899999999999999999999 99999999866544333222     2378899999999998887764    358999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +||++|.....                   ...+.+.+++.+++++|+.+++.+.+.+++.|+++. +++|++||..+..
T Consensus        75 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~  134 (227)
T PRK08219         75 LVHNAGVADLG-------------------PVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLR  134 (227)
T ss_pred             EEECCCcCCCC-------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcC
Confidence            99999874321                   123456788899999999999999999999998775 8999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|.
T Consensus       135 ~~~~~~~y~~~K~  147 (227)
T PRK08219        135 ANPGWGSYAASKF  147 (227)
T ss_pred             cCCCCchHHHHHH
Confidence            8888888988874

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.83  E-value=1.8e-21  Score=138.52  Aligned_cols=155  Identities=22%  Similarity=0.214  Sum_probs=121.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|+||+|+|||..+++.+..++-+.+..++.+..++  .+.+.-..++.......|++...-+.++++..++..+..|+
T Consensus         8 villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~i   85 (253)
T KOG1204|consen    8 VILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDI   85 (253)
T ss_pred             EEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCceeE
Confidence            4899999999999999999988766444444333222  22233333344445567888888888899999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||||...+....                .....+.++|+++++.|+++++.|.+.++|.+++++ .+.+||+||.+++
T Consensus        86 iI~NAG~lgdvsk~----------------~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav  149 (253)
T KOG1204|consen   86 IIHNAGSLGDVSKG----------------AVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV  149 (253)
T ss_pred             EEecCCCccchhhc----------------cCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh
Confidence            99999997654311                012346688999999999999999999999999885 6899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .|.+++++||.+|.
T Consensus       150 ~p~~~wa~yc~~Ka  163 (253)
T KOG1204|consen  150 RPFSSWAAYCSSKA  163 (253)
T ss_pred             ccccHHHHhhhhHH
Confidence            99999999999984

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.77  E-value=4.7e-18  Score=130.92  Aligned_cols=127  Identities=19%  Similarity=0.190  Sum_probs=95.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|+||.+++++|+++|++|+++.|+.....+....+...+ ..++.++.+|++|.++++++++       ++|
T Consensus         7 ~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d   79 (325)
T PLN02989          7 VVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------GCE   79 (325)
T ss_pred             EEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------CCC
Confidence            48999999999999999999999999998887654333322222111 1358889999999999888775       689


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||....                       ..+.+.+.+.+++|+.+++++++++.+.+   +.++||++||..+.
T Consensus        80 ~vih~A~~~~~-----------------------~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~  133 (325)
T PLN02989         80 TVFHTASPVAI-----------------------TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAV  133 (325)
T ss_pred             EEEEeCCCCCC-----------------------CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhhe
Confidence            99999986321                       01112345669999999999999997654   24799999998765


Q ss_pred             c
Q 035504          160 L  160 (174)
Q Consensus       160 ~  160 (174)
                      .
T Consensus       134 ~  134 (325)
T PLN02989        134 L  134 (325)
T ss_pred             e
Confidence            4

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.76  E-value=2.8e-17  Score=117.41  Aligned_cols=153  Identities=18%  Similarity=0.171  Sum_probs=126.8

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++||+|-.  +.|+..+|+.|.++|+++.+++..+ +.++-.+++.+..+. ..+++||+++.+++++++++++++||.+
T Consensus         8 ~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s-~~v~~cDV~~d~~i~~~f~~i~~~~g~l   85 (259)
T COG0623           8 RILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS-DLVLPCDVTNDESIDALFATIKKKWGKL   85 (259)
T ss_pred             eEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC-CeEEecCCCCHHHHHHHHHHHHHhhCcc
Confidence            46888874  9999999999999999999999986 566666666555433 6789999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |.+||+-|..+-.               +.-..+.+++.+.|...+++...+...++|++.|.|..  +|+|+.+|-..+
T Consensus        86 D~lVHsIaFa~k~---------------el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs  148 (259)
T COG0623          86 DGLVHSIAFAPKE---------------ELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGS  148 (259)
T ss_pred             cEEEEEeccCChH---------------HhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccc
Confidence            9999999875311               11234556788889999999999999999999999965  589999999998


Q ss_pred             cccCCCCcceeeec
Q 035504          159 KLKNTWQGAICYLT  172 (174)
Q Consensus       159 ~~~~~~~~~y~~~k  172 (174)
                      ....|..+....+|
T Consensus       149 ~r~vPnYNvMGvAK  162 (259)
T COG0623         149 ERVVPNYNVMGVAK  162 (259)
T ss_pred             eeecCCCchhHHHH
Confidence            88777777666555

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.75  E-value=1.3e-17  Score=128.63  Aligned_cols=133  Identities=21%  Similarity=0.287  Sum_probs=97.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||.+++++|+++|  ++|++++|+.....+..+.+.   ..++.++.+|++|.+++.++++       ++
T Consensus         6 ~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~l~~~~~-------~i   75 (324)
T TIGR03589         6 SILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP---APCLRFFIGDVRDKERLTRALR-------GV   75 (324)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC---CCcEEEEEccCCCHHHHHHHHh-------cC
Confidence            48999999999999999999986  789988887554333323321   1358899999999999887765       58


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++||+||......                    .+.+   ..+.+++|+.++.++++++.+    .+.++||++||...
T Consensus        76 D~Vih~Ag~~~~~~--------------------~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~  128 (324)
T TIGR03589        76 DYVVHAAALKQVPA--------------------AEYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKA  128 (324)
T ss_pred             CEEEECcccCCCch--------------------hhcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCC
Confidence            99999999743110                    0001   124699999999999999853    44579999999765


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..|   ...|+.+|.
T Consensus       129 ~~p---~~~Y~~sK~  140 (324)
T TIGR03589       129 ANP---INLYGATKL  140 (324)
T ss_pred             CCC---CCHHHHHHH
Confidence            432   356887774

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.74  E-value=4.3e-17  Score=126.90  Aligned_cols=140  Identities=20%  Similarity=0.089  Sum_probs=100.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.....+....+..  ..++.++.+|++|.+++.+++++.     ++|+
T Consensus         6 ~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~   78 (349)
T TIGR02622         6 KVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL--AKKIEDHFGDIRDAAKLRKAIAEF-----KPEI   78 (349)
T ss_pred             EEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh--cCCceEEEccCCCHHHHHHHHhhc-----CCCE
Confidence            489999999999999999999999999999876543333222221  124778899999999999888865     6899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +||+||....                       ..+.+++...+++|+.+++++++++.+ +  ...+++|++||.....
T Consensus        79 vih~A~~~~~-----------------------~~~~~~~~~~~~~N~~g~~~ll~a~~~-~--~~~~~iv~~SS~~vyg  132 (349)
T TIGR02622        79 VFHLAAQPLV-----------------------RKSYADPLETFETNVMGTVNLLEAIRA-I--GSVKAVVNVTSDKCYR  132 (349)
T ss_pred             EEECCccccc-----------------------ccchhCHHHHHHHhHHHHHHHHHHHHh-c--CCCCEEEEEechhhhC
Confidence            9999985321                       112234456689999999999998732 1  2246999999963221


Q ss_pred             ------------cCCCCcceeeecc
Q 035504          161 ------------KNTWQGAICYLTF  173 (174)
Q Consensus       161 ------------~~~~~~~y~~~k~  173 (174)
                                  +..+...|+.+|.
T Consensus       133 ~~~~~~~~~e~~~~~p~~~Y~~sK~  157 (349)
T TIGR02622       133 NDEWVWGYRETDPLGGHDPYSSSKA  157 (349)
T ss_pred             CCCCCCCCccCCCCCCCCcchhHHH
Confidence                        1123467888774

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.72  E-value=1.1e-16  Score=129.50  Aligned_cols=123  Identities=20%  Similarity=0.283  Sum_probs=95.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc-----C---CCceeEEEeecCChhhHHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS-----G---FDSVIFHQLDVADPATIHSLADFVR   72 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-----~---~~~~~~~~~Dv~~~~~i~~~~~~~~   72 (174)
                      ++|||||+|+||++++++|+++|++|++++|+.+......+++.+.     +   ..++.++.+|++|.+++.++     
T Consensus        82 vVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a-----  156 (576)
T PLN03209         82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA-----  156 (576)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-----
Confidence            5899999999999999999999999999999987766665554321     1   12588999999999887653     


Q ss_pred             hhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEE
Q 035504           73 SQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVN  152 (174)
Q Consensus        73 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~  152 (174)
                        ++++|+||||+|....                         ...++...+++|+.+..++++++.    +.+.++||+
T Consensus       157 --LggiDiVVn~AG~~~~-------------------------~v~d~~~~~~VN~~Gt~nLl~Aa~----~agVgRIV~  205 (576)
T PLN03209        157 --LGNASVVICCIGASEK-------------------------EVFDVTGPYRIDYLATKNLVDAAT----VAKVNHFIL  205 (576)
T ss_pred             --hcCCCEEEEccccccc-------------------------cccchhhHHHHHHHHHHHHHHHHH----HhCCCEEEE
Confidence              4589999999986321                         001234558999999999999884    445689999


Q ss_pred             EecCCCc
Q 035504          153 VSSNMGK  159 (174)
Q Consensus       153 isS~~~~  159 (174)
                      +||+.+.
T Consensus       206 VSSiga~  212 (576)
T PLN03209        206 VTSLGTN  212 (576)
T ss_pred             Eccchhc
Confidence            9998764

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.71  E-value=1.4e-16  Score=120.59  Aligned_cols=126  Identities=23%  Similarity=0.247  Sum_probs=100.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH--HHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE--AVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||+|.||..++++|+++||+|..+.|+++...+  .+.+++... .++..+..|++|+++++.+++       ++
T Consensus         8 ~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~-~~l~l~~aDL~d~~sf~~ai~-------gc   79 (327)
T KOG1502|consen    8 KVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAK-ERLKLFKADLLDEGSFDKAID-------GC   79 (327)
T ss_pred             EEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCc-ccceEEeccccccchHHHHHh-------CC
Confidence            48999999999999999999999999999998775333  345555433 359999999999999999998       89


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~  157 (174)
                      |.|+|.|....+...             +           .-.++++.++.|+.++.+++    ++.+ ..|||++||.+
T Consensus        80 dgVfH~Asp~~~~~~-------------~-----------~e~~li~pav~Gt~nVL~ac----~~~~sVkrvV~TSS~a  131 (327)
T KOG1502|consen   80 DGVFHTASPVDFDLE-------------D-----------PEKELIDPAVKGTKNVLEAC----KKTKSVKRVVYTSSTA  131 (327)
T ss_pred             CEEEEeCccCCCCCC-------------C-----------cHHhhhhHHHHHHHHHHHHH----hccCCcceEEEeccHH
Confidence            999999977543210             0           01245899999999999999    4444 67999999999


Q ss_pred             CcccC
Q 035504          158 GKLKN  162 (174)
Q Consensus       158 ~~~~~  162 (174)
                      +...+
T Consensus       132 Av~~~  136 (327)
T KOG1502|consen  132 AVRYN  136 (327)
T ss_pred             HhccC
Confidence            98754

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.70  E-value=2.5e-17  Score=122.00  Aligned_cols=115  Identities=29%  Similarity=0.302  Sum_probs=92.5

Q ss_pred             HHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEecccccCccCCC
Q 035504           15 TVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDG   94 (174)
Q Consensus        15 ~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~   94 (174)
                      +|++|+++|++|++++|+.+...            ...++++|++|.++++++++++.   +++|++|||||....    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~----   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT----   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC----
Confidence            47899999999999999865421            12457899999999999988774   689999999997311    


Q ss_pred             CCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc--------------
Q 035504           95 DALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL--------------  160 (174)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--------------  160 (174)
                                             +.+++.+++|+.+++++++.++|.|++.  |+||++||..+..              
T Consensus        62 -----------------------~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~Iv~isS~~~~~~~~~~~~~~~~~~~  116 (241)
T PRK12428         62 -----------------------APVELVARVNFLGLRHLTEALLPRMAPG--GAIVNVASLAGAEWPQRLELHKALAAT  116 (241)
T ss_pred             -----------------------CCHHHhhhhchHHHHHHHHHHHHhccCC--cEEEEeCcHHhhccccchHHHHhhhcc
Confidence                                   1245679999999999999999999643  8999999998863              


Q ss_pred             -------------cCCCCcceeeecc
Q 035504          161 -------------KNTWQGAICYLTF  173 (174)
Q Consensus       161 -------------~~~~~~~y~~~k~  173 (174)
                                   +.++...|+.+|+
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~Y~~sK~  142 (241)
T PRK12428        117 ASFDEGAAWLAAHPVALATGYQLSKE  142 (241)
T ss_pred             chHHHHHHhhhccCCCcccHHHHHHH
Confidence                         4566788999885

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.69  E-value=3e-16  Score=121.86  Aligned_cols=126  Identities=21%  Similarity=0.215  Sum_probs=90.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH-HHHHHHHh----hcCCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG-LEAVEKLK----HSGFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~----~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.+.. .+..+.+.    .....++.++.+|++|.+++.++++..    
T Consensus         2 ~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~----   77 (343)
T TIGR01472         2 IALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI----   77 (343)
T ss_pred             eEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC----
Confidence            589999999999999999999999999999875321 11112221    111235889999999999999888865    


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhh-ccCCCCCeEEEEe
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPL-LQLSDLPRIVNVS  154 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-m~~~~~g~iv~is  154 (174)
                       ++|.|||+|+..+...                       ..+.-...+++|+.|+.++++++.+. ++  +..++|++|
T Consensus        78 -~~d~ViH~Aa~~~~~~-----------------------~~~~~~~~~~~n~~gt~~ll~a~~~~~~~--~~~~~v~~S  131 (343)
T TIGR01472        78 -KPTEIYNLAAQSHVKV-----------------------SFEIPEYTADVDGIGTLRLLEAVRTLGLI--KSVKFYQAS  131 (343)
T ss_pred             -CCCEEEECCcccccch-----------------------hhhChHHHHHHHHHHHHHHHHHHHHhCCC--cCeeEEEec
Confidence             5899999999743210                       00111344789999999999998653 21  114799999


Q ss_pred             cC
Q 035504          155 SN  156 (174)
Q Consensus       155 S~  156 (174)
                      |.
T Consensus       132 S~  133 (343)
T TIGR01472       132 TS  133 (343)
T ss_pred             cH
Confidence            95

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.69  E-value=3.2e-16  Score=120.66  Aligned_cols=125  Identities=17%  Similarity=0.162  Sum_probs=91.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc-CCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||+|+||.+++++|+++|++|+++.|+.....+..+..... ...++.++.+|++|.+++.++++       ++|
T Consensus         7 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   79 (322)
T PLN02986          7 LVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-------GCD   79 (322)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-------CCC
Confidence            4899999999999999999999999998988765433322222111 12358889999999999888776       689


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++||+|+......             .           +...+.+++|+.++.++++++...   .+.++||++||..+.
T Consensus        80 ~vih~A~~~~~~~-------------~-----------~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~  132 (322)
T PLN02986         80 AVFHTASPVFFTV-------------K-----------DPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAV  132 (322)
T ss_pred             EEEEeCCCcCCCC-------------C-----------CchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhhe
Confidence            9999998632100             0           001235899999999999987321   234699999998653

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.69  E-value=5.5e-16  Score=120.86  Aligned_cols=129  Identities=22%  Similarity=0.186  Sum_probs=92.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||..++++|+++|++|++++|+..........+..  ..++.++.+|++|.+++.++++       ++|.
T Consensus        12 ~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-------~~d~   82 (353)
T PLN02896         12 TYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE--GDRLRLFRADLQEEGSFDEAVK-------GCDG   82 (353)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc--CCeEEEEECCCCCHHHHHHHHc-------CCCE
Confidence            489999999999999999999999999999876544444443332  2458889999999998887765       5899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHH--HHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL--AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |||+|+.......               +   ...+++.  ....+++|+.++.++++++.+..   ..++||++||...
T Consensus        83 Vih~A~~~~~~~~---------------~---~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~v  141 (353)
T PLN02896         83 VFHVAASMEFDVS---------------S---DHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSIST  141 (353)
T ss_pred             EEECCccccCCcc---------------c---cccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhh
Confidence            9999987532110               0   0001111  13457788899999999885432   2469999999754


Q ss_pred             c
Q 035504          159 K  159 (174)
Q Consensus       159 ~  159 (174)
                      .
T Consensus       142 y  142 (353)
T PLN02896        142 L  142 (353)
T ss_pred             c
Confidence            3

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.68  E-value=2.6e-16  Score=122.00  Aligned_cols=128  Identities=20%  Similarity=0.155  Sum_probs=92.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH-HHHHHHHhh---cCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG-LEAVEKLKH---SGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~---~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.... ....+.+..   ..+.++.++.+|++|.+++.++++++     
T Consensus         8 ~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   82 (340)
T PLN02653          8 VALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI-----   82 (340)
T ss_pred             EEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc-----
Confidence            489999999999999999999999999998864321 111222211   11235889999999999999988865     


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEec
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSS  155 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS  155 (174)
                      ++|+|||+|+..+...                       ..+.....+++|+.++.++++++.+.+.+++ .-++|++||
T Consensus        83 ~~d~Vih~A~~~~~~~-----------------------~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss  139 (340)
T PLN02653         83 KPDEVYNLAAQSHVAV-----------------------SFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGS  139 (340)
T ss_pred             CCCEEEECCcccchhh-----------------------hhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEecc
Confidence            5899999999743210                       0112234578999999999999988765431 127888887


Q ss_pred             C
Q 035504          156 N  156 (174)
Q Consensus       156 ~  156 (174)
                      .
T Consensus       140 ~  140 (340)
T PLN02653        140 S  140 (340)
T ss_pred             H
Confidence            4

>PLN02214 cinnamoyl-CoA reductase

Probab=99.68  E-value=6.5e-16  Score=120.05  Aligned_cols=120  Identities=22%  Similarity=0.191  Sum_probs=91.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH-HHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE-AVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||+|+||..++++|+++|++|+++.|+.+.... ....+.. ...++.++.+|++|.+++.++++       ++|
T Consensus        12 ~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   83 (342)
T PLN02214         12 TVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG-GKERLILCKADLQDYEALKAAID-------GCD   83 (342)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC-CCCcEEEEecCcCChHHHHHHHh-------cCC
Confidence            48999999999999999999999999999997553222 1222321 12358889999999998888776       689


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +|||+|+....                            +..+.+++|+.++.++++++.    +.+.++||++||..+.
T Consensus        84 ~Vih~A~~~~~----------------------------~~~~~~~~nv~gt~~ll~aa~----~~~v~r~V~~SS~~av  131 (342)
T PLN02214         84 GVFHTASPVTD----------------------------DPEQMVEPAVNGAKFVINAAA----EAKVKRVVITSSIGAV  131 (342)
T ss_pred             EEEEecCCCCC----------------------------CHHHHHHHHHHHHHHHHHHHH----hcCCCEEEEeccceee
Confidence            99999985210                            123458999999999999984    3445699999997655


Q ss_pred             c
Q 035504          160 L  160 (174)
Q Consensus       160 ~  160 (174)
                      .
T Consensus       132 y  132 (342)
T PLN02214        132 Y  132 (342)
T ss_pred             e
Confidence            4

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.68  E-value=6e-16  Score=119.92  Aligned_cols=123  Identities=15%  Similarity=0.181  Sum_probs=88.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHH--HHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV--EKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~--~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||..++++|+++|++|+++.|+........  ..+...  .++.++.+|++|.+++.+++.       ++
T Consensus        11 ~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~-------~~   81 (338)
T PLN00198         11 TACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQEL--GDLKIFGADLTDEESFEAPIA-------GC   81 (338)
T ss_pred             eEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCC--CceEEEEcCCCChHHHHHHHh-------cC
Confidence            4899999999999999999999999998888754322221  122111  248889999999988877665       68


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++||+|+.....                        ..+.....+++|+.++.++++++.+.   .+.++||++||.+.
T Consensus        82 d~vih~A~~~~~~------------------------~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~  134 (338)
T PLN00198         82 DLVFHVATPVNFA------------------------SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAA  134 (338)
T ss_pred             CEEEEeCCCCccC------------------------CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeeccee
Confidence            9999999852110                        00111234799999999999998542   23479999999754


Q ss_pred             c
Q 035504          159 K  159 (174)
Q Consensus       159 ~  159 (174)
                      .
T Consensus       135 ~  135 (338)
T PLN00198        135 V  135 (338)
T ss_pred             e
Confidence            3

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.68  E-value=5.8e-16  Score=119.82  Aligned_cols=125  Identities=19%  Similarity=0.215  Sum_probs=90.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|...........+....+.++.++.+|++|.+++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            4899999999999999999999999998876433222222223332333577889999999988887763     36999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +||+||......                       ..+.....+++|+.++.++++++    ++.+.++||++||..
T Consensus        77 vvh~a~~~~~~~-----------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~  126 (338)
T PRK10675         77 VIHFAGLKAVGE-----------------------SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSAT  126 (338)
T ss_pred             EEECCccccccc-----------------------hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHH
Confidence            999998743210                       00112345899999999998876    555567899999964

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.67  E-value=9.9e-16  Score=122.65  Aligned_cols=128  Identities=14%  Similarity=0.061  Sum_probs=90.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh---HH-------------HHHHHHHhhcCCCceeEEEeecCChhhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK---RG-------------LEAVEKLKHSGFDSVIFHQLDVADPATI   64 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~---~~-------------~~~~~~l~~~~~~~~~~~~~Dv~~~~~i   64 (174)
                      ++|||||+|+||..++++|+++|++|+++++...   ..             .+..+.+......++.++.+|++|.+++
T Consensus        49 ~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v  128 (442)
T PLN02572         49 KVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFL  128 (442)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHH
Confidence            4899999999999999999999999999864211   10             0111112111223588999999999999


Q ss_pred             HHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccC
Q 035504           65 HSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQL  144 (174)
Q Consensus        65 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~  144 (174)
                      .+++++.     ++|+|||+|+.....                    ....+.++....+++|+.|++++++++..    
T Consensus       129 ~~~l~~~-----~~D~ViHlAa~~~~~--------------------~~~~~~~~~~~~~~~Nv~gt~nlleaa~~----  179 (442)
T PLN02572        129 SEAFKSF-----EPDAVVHFGEQRSAP--------------------YSMIDRSRAVFTQHNNVIGTLNVLFAIKE----  179 (442)
T ss_pred             HHHHHhC-----CCCEEEECCCcccCh--------------------hhhcChhhHHHHHHHHHHHHHHHHHHHHH----
Confidence            9888864     699999999753211                    01112234455689999999999998843    


Q ss_pred             CCC-CeEEEEecCC
Q 035504          145 SDL-PRIVNVSSNM  157 (174)
Q Consensus       145 ~~~-g~iv~isS~~  157 (174)
                      .+. .++|++||..
T Consensus       180 ~gv~~~~V~~SS~~  193 (442)
T PLN02572        180 FAPDCHLVKLGTMG  193 (442)
T ss_pred             hCCCccEEEEecce
Confidence            333 4899999874

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.67  E-value=7.8e-16  Score=119.95  Aligned_cols=127  Identities=17%  Similarity=0.141  Sum_probs=88.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEE-EeeChhHHHHHHHHHhhc-CCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHS-GFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||.++++.|+++|+++++ +++.... .+. ..+... ...++.++.+|++|.+++++++++.     ++
T Consensus         3 ~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   75 (355)
T PRK10217          3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDRAELARVFTEH-----QP   75 (355)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcChHHHHHHHhhc-----CC
Confidence            4899999999999999999999987554 4443221 111 111111 1124778899999999998887753     69


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhcc---C--CCCCeEEEE
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQ---L--SDLPRIVNV  153 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~---~--~~~g~iv~i  153 (174)
                      |.|||+||....                       +.+.+.++..+++|+.++.++++++.+.|.   +  .+..++|++
T Consensus        76 D~Vih~A~~~~~-----------------------~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~  132 (355)
T PRK10217         76 DCVMHLAAESHV-----------------------DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHI  132 (355)
T ss_pred             CEEEECCcccCc-----------------------chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEe
Confidence            999999986421                       112233456699999999999999977542   1  123589999


Q ss_pred             ecCC
Q 035504          154 SSNM  157 (174)
Q Consensus       154 sS~~  157 (174)
                      ||..
T Consensus       133 SS~~  136 (355)
T PRK10217        133 STDE  136 (355)
T ss_pred             cchh
Confidence            9953

>PLN02240 UDP-glucose 4-epimerase

Probab=99.67  E-value=5.4e-16  Score=120.62  Aligned_cols=124  Identities=24%  Similarity=0.292  Sum_probs=90.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHh---hcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLK---HSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +++||||+|+||.+++++|+++|++|++++|......+....+.   ...+.++.++.+|++|++++.+++++.     +
T Consensus         7 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-----~   81 (352)
T PLN02240          7 TILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-----R   81 (352)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-----C
Confidence            48999999999999999999999999999875332222112221   111235888999999999998887653     7


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      +|.+||+|+......                       +.++....+++|+.++.++++++    ++.+.+++|++||.
T Consensus        82 ~d~vih~a~~~~~~~-----------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~  133 (352)
T PLN02240         82 FDAVIHFAGLKAVGE-----------------------SVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSA  133 (352)
T ss_pred             CCEEEEccccCCccc-----------------------cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccH
Confidence            999999998742110                       11233456999999999999876    44455789999995

>PLN02583 cinnamoyl-CoA reductase

Probab=99.66  E-value=2e-15  Score=115.20  Aligned_cols=124  Identities=15%  Similarity=0.077  Sum_probs=90.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH--HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR--GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||.+++++|+++|++|+++.|+...  ..+....+... +.++.++.+|++|.+++.+++.       ++
T Consensus         8 ~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~~~~~l~-------~~   79 (297)
T PLN02583          8 SVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE-EERLKVFDVDPLDYHSILDALK-------GC   79 (297)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC-CCceEEEEecCCCHHHHHHHHc-------CC
Confidence            48999999999999999999999999999986332  22223333221 2358889999999998876654       67


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |.++|.++....             .           . .++++.+++|+.|++++++++.+.+   +.++||++||..+
T Consensus        80 d~v~~~~~~~~~-------------~-----------~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a  131 (297)
T PLN02583         80 SGLFCCFDPPSD-------------Y-----------P-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTA  131 (297)
T ss_pred             CEEEEeCccCCc-------------c-----------c-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHh
Confidence            888886643110             0           0 1234569999999999999997654   2479999999876


Q ss_pred             cc
Q 035504          159 KL  160 (174)
Q Consensus       159 ~~  160 (174)
                      ..
T Consensus       132 ~~  133 (297)
T PLN02583        132 VI  133 (297)
T ss_pred             ee
Confidence            53

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.65  E-value=3.8e-15  Score=115.36  Aligned_cols=166  Identities=16%  Similarity=0.076  Sum_probs=105.8

Q ss_pred             CEEEecCCCchhHH--HHHHHHHCCCeEEEEeeChhHHH------------HHHHHHhhcCCCceeEEEeecCChhhHHH
Q 035504            1 YAVVTGANKGIGYE--TVRQLASNGIIVVLTARDEKRGL------------EAVEKLKHSGFDSVIFHQLDVADPATIHS   66 (174)
Q Consensus         1 ~~litGa~~giG~~--~a~~l~~~g~~v~~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~   66 (174)
                      ++||||+++|||.+  +|+.| ++|++++++++..+...            ...+.+.+.+ ..+..+.+|+++.+++++
T Consensus        43 ~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G-~~a~~i~~DVss~E~v~~  120 (398)
T PRK13656         43 KVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAG-LYAKSINGDAFSDEIKQK  120 (398)
T ss_pred             EEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcC-CceEEEEcCCCCHHHHHH
Confidence            48999999999999  89999 99999888875322211            1222333333 347788999999999999


Q ss_pred             HHHHHHhhcCCccEEEecccccCccCC--CCCc-----------cccccCCCCcccccc--cccCHHHHHHhhHhhhhhH
Q 035504           67 LADFVRSQFGKLDILVNNAAIFGVSVD--GDAL-----------SGFVKDGEPIKWNEI--VTPTYELAEKCLRTNYYGS  131 (174)
Q Consensus        67 ~~~~~~~~~g~id~li~~ag~~~~~~~--~~~~-----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~n~~~~  131 (174)
                      +++++.+++|+||+||||+|......|  ...+           .....+.+.+++...  ...+.++++  -.+++||-
T Consensus       121 lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~--~Tv~vMgg  198 (398)
T PRK13656        121 VIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIA--DTVKVMGG  198 (398)
T ss_pred             HHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHH--HHHHhhcc
Confidence            999999999999999999998643221  1111           111122222222211  123444444  45667775


Q ss_pred             -----HHHHHhhhhhccCCCCCeEEEEecCCCcccCCCC--cceeeec
Q 035504          132 -----KRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ--GAICYLT  172 (174)
Q Consensus       132 -----~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--~~y~~~k  172 (174)
                           +.=++...++|.  +.+++|-+|+..+....|..  +..+.+|
T Consensus       199 edw~~Wi~al~~a~lla--~g~~~va~TY~G~~~t~p~Y~~g~mG~AK  244 (398)
T PRK13656        199 EDWELWIDALDEAGVLA--EGAKTVAYSYIGPELTHPIYWDGTIGKAK  244 (398)
T ss_pred             chHHHHHHHHHhccccc--CCcEEEEEecCCcceeecccCCchHHHHH
Confidence                 222344555663  34899999998876654433  3444443

>PLN02650 dihydroflavonol-4-reductase

Probab=99.65  E-value=2e-15  Score=117.65  Aligned_cols=124  Identities=19%  Similarity=0.148  Sum_probs=90.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|+||.+++++|+++|++|+++.|+.+........+...+ ..++.++..|++|.+.++++++       .+|
T Consensus         7 ~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------~~d   79 (351)
T PLN02650          7 TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------GCT   79 (351)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------CCC
Confidence            48999999999999999999999999999987654433322221111 1247889999999998887775       589


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      .+||+|+.....           ..             +..+..+++|+.++.++++++.+..   ..++||++||...
T Consensus        80 ~ViH~A~~~~~~-----------~~-------------~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~  131 (351)
T PLN02650         80 GVFHVATPMDFE-----------SK-------------DPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGT  131 (351)
T ss_pred             EEEEeCCCCCCC-----------CC-------------CchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhh
Confidence            999999753210           00             0012348999999999999985432   1368999999753

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.64  E-value=5.3e-16  Score=116.26  Aligned_cols=136  Identities=27%  Similarity=0.299  Sum_probs=95.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCC-cee----EEEeecCChhhHHHHHHHHHhhc
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFD-SVI----FHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~-~~~----~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      +|||||+|.||.+++++|++.+. +++++++++...-+..+++....+. ++.    .+.+|+.|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            69999999999999999999985 7999999998888888888654432 343    4578999999999888766    


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS  155 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS  155 (174)
                       ++|+++|.|+.-+.+         +.+..              ..+.+++|+.|+.++++++.    +.+..++|++|+
T Consensus        77 -~pdiVfHaAA~KhVp---------l~E~~--------------p~eav~tNv~GT~nv~~aa~----~~~v~~~v~IST  128 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVP---------LMEDN--------------PFEAVKTNVLGTQNVAEAAI----EHGVERFVFIST  128 (293)
T ss_dssp             -T-SEEEE------HH---------HHCCC--------------HHHHHHHHCHHHHHHHHHHH----HTT-SEEEEEEE
T ss_pred             -CCCEEEEChhcCCCC---------hHHhC--------------HHHHHHHHHHHHHHHHHHHH----HcCCCEEEEccc
Confidence             899999999986643         22211              23559999999999999994    456689999999


Q ss_pred             CCCcccCCCCcceeeec
Q 035504          156 NMGKLKNTWQGAICYLT  172 (174)
Q Consensus       156 ~~~~~~~~~~~~y~~~k  172 (174)
                      =-+..|.   +.|+++|
T Consensus       129 DKAv~Pt---nvmGatK  142 (293)
T PF02719_consen  129 DKAVNPT---NVMGATK  142 (293)
T ss_dssp             CGCSS-----SHHHHHH
T ss_pred             cccCCCC---cHHHHHH
Confidence            8776632   5566655

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.63  E-value=3.9e-15  Score=110.66  Aligned_cols=125  Identities=26%  Similarity=0.241  Sum_probs=96.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|-||...+++|++.|++|++++.-.....+.....+      ..+++.|+.|.+.+++++++-     +||.
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~------~~f~~gDi~D~~~L~~vf~~~-----~ida   70 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ------FKFYEGDLLDRALLTAVFEEN-----KIDA   70 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc------CceEEeccccHHHHHHHHHhc-----CCCE
Confidence            58999999999999999999999999999885443333332211      688999999999999999877     8999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      |||.||....                       ..+.+..-++++.|+.|+..|++++    ++.+...||| ||.++++
T Consensus        71 ViHFAa~~~V-----------------------gESv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vF-SStAavY  122 (329)
T COG1087          71 VVHFAASISV-----------------------GESVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIF-SSTAAVY  122 (329)
T ss_pred             EEECcccccc-----------------------chhhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEE-ecchhhc
Confidence            9999997432                       2344445577999999999999888    5556566555 6666666


Q ss_pred             cCCC
Q 035504          161 KNTW  164 (174)
Q Consensus       161 ~~~~  164 (174)
                      +.|.
T Consensus       123 G~p~  126 (329)
T COG1087         123 GEPT  126 (329)
T ss_pred             CCCC
Confidence            6553

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.61  E-value=4.1e-15  Score=112.50  Aligned_cols=120  Identities=23%  Similarity=0.279  Sum_probs=92.1

Q ss_pred             EEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            3 VVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         3 litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      |||||+|.+|..++++|+++|  ++|.++++......  ...+...  ....++.+|++|++++.++++       ++|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~--~~~~~~~~Di~d~~~l~~a~~-------g~d~   69 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS--GVKEYIQGDITDPESLEEALE-------GVDV   69 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhcc--cceeEEEeccccHHHHHHHhc-------CCce
Confidence            699999999999999999999  78888887654321  1112111  123489999999999999887       7899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      |||+|+......                        ....+.++++|+.|+.++++++    ++.+..++||+||.+...
T Consensus        70 V~H~Aa~~~~~~------------------------~~~~~~~~~vNV~GT~nvl~aa----~~~~VkrlVytSS~~vv~  121 (280)
T PF01073_consen   70 VFHTAAPVPPWG------------------------DYPPEEYYKVNVDGTRNVLEAA----RKAGVKRLVYTSSISVVF  121 (280)
T ss_pred             EEEeCccccccC------------------------cccHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcCcceeE
Confidence            999998754321                        1123456999999999999998    455678999999998776


Q ss_pred             c
Q 035504          161 K  161 (174)
Q Consensus       161 ~  161 (174)
                      +
T Consensus       122 ~  122 (280)
T PF01073_consen  122 D  122 (280)
T ss_pred             e
Confidence            5

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.61  E-value=6.7e-15  Score=117.50  Aligned_cols=137  Identities=23%  Similarity=0.244  Sum_probs=111.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||+|.||.++|+++++.+. ++++.++++-..-+..++++...+ .++.++-+|+.|.+.++++++..     ++
T Consensus       252 ~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-----kv  326 (588)
T COG1086         252 TVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-----KV  326 (588)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-----CC
Confidence            589999999999999999999976 588999998877788888887644 46899999999999999999855     69


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+++|.|+.-+.+         +.+..|              .+.+++|+.|+.++++++    .+.+..++|++|+=-+
T Consensus       327 d~VfHAAA~KHVP---------l~E~nP--------------~Eai~tNV~GT~nv~~aa----~~~~V~~~V~iSTDKA  379 (588)
T COG1086         327 DIVFHAAALKHVP---------LVEYNP--------------EEAIKTNVLGTENVAEAA----IKNGVKKFVLISTDKA  379 (588)
T ss_pred             ceEEEhhhhccCc---------chhcCH--------------HHHHHHhhHhHHHHHHHH----HHhCCCEEEEEecCcc
Confidence            9999999986643         222222              245899999999999999    5667789999999888


Q ss_pred             cccCCCCcceeeec
Q 035504          159 KLKNTWQGAICYLT  172 (174)
Q Consensus       159 ~~~~~~~~~y~~~k  172 (174)
                      ..|.   +.|.++|
T Consensus       380 V~Pt---NvmGaTK  390 (588)
T COG1086         380 VNPT---NVMGATK  390 (588)
T ss_pred             cCCc---hHhhHHH
Confidence            8754   3444444

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.61  E-value=7.6e-15  Score=112.63  Aligned_cols=123  Identities=25%  Similarity=0.279  Sum_probs=88.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||..++++|+++|++|+++++......+....+...+  ++..+.+|+++.+++.+++..     +++|+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~-----~~~d~   73 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERIT--RVTFVEGDLRDRELLDRLFEE-----HKIDA   73 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcccc--ceEEEECCCCCHHHHHHHHHh-----CCCcE
Confidence            58999999999999999999999999888764332222222222211  477889999999999887763     47999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|||||......                       ...+..+.+++|+.++..+++++    .+.+.+++|++||..
T Consensus        74 vv~~ag~~~~~~-----------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~ss~~  123 (328)
T TIGR01179        74 VIHFAGLIAVGE-----------------------SVQDPLKYYRNNVVNTLNLLEAM----QQTGVKKFIFSSSAA  123 (328)
T ss_pred             EEECccccCcch-----------------------hhcCchhhhhhhHHHHHHHHHHH----HhcCCCEEEEecchh
Confidence            999999743211                       01112244889999999999876    444557899999864

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.60  E-value=1e-14  Score=113.54  Aligned_cols=123  Identities=15%  Similarity=0.108  Sum_probs=89.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHh----hcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLK----HSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||+|.||..++++|+++|++|++++|...........+.    .....++.++.+|+.|.+++.++++       
T Consensus        17 ~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-------   89 (348)
T PRK15181         17 RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-------   89 (348)
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-------
Confidence            48999999999999999999999999999886432222222221    1112357889999999888877765       


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      .+|+|||.|+......                       ..++....+++|+.|+.++.+++    ++.+..++||+||.
T Consensus        90 ~~d~ViHlAa~~~~~~-----------------------~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~v~~SS~  142 (348)
T PRK15181         90 NVDYVLHQAALGSVPR-----------------------SLKDPIATNSANIDGFLNMLTAA----RDAHVSSFTYAASS  142 (348)
T ss_pred             CCCEEEECccccCchh-----------------------hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeech
Confidence            5899999998743210                       01112234899999999999888    44555699999986


Q ss_pred             C
Q 035504          157 M  157 (174)
Q Consensus       157 ~  157 (174)
                      .
T Consensus       143 ~  143 (348)
T PRK15181        143 S  143 (348)
T ss_pred             H
Confidence            3

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.60  E-value=1.1e-14  Score=113.38  Aligned_cols=127  Identities=20%  Similarity=0.193  Sum_probs=88.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeChh-HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDEK-RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||..++++|+++|++ |+.+.+... ...+....+.  ...++.++.+|++|.+++.+++++.     ++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVS--DSERYVFEHADICDRAELDRIFAQH-----QP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcc--cCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence            4899999999999999999999986 444444321 1111111111  1234778899999999999888753     79


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC-----CCCeEEEE
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS-----DLPRIVNV  153 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-----~~g~iv~i  153 (174)
                      |++||+||.......               +        +..+..+++|+.++.++++++.++|++.     +..++|++
T Consensus        75 d~vih~A~~~~~~~~---------------~--------~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~  131 (352)
T PRK10084         75 DAVMHLAAESHVDRS---------------I--------TGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHI  131 (352)
T ss_pred             CEEEECCcccCCcch---------------h--------cCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEe
Confidence            999999987432100               0        0113358999999999999998776432     23589999


Q ss_pred             ecCC
Q 035504          154 SSNM  157 (174)
Q Consensus       154 sS~~  157 (174)
                      ||..
T Consensus       132 SS~~  135 (352)
T PRK10084        132 STDE  135 (352)
T ss_pred             cchh
Confidence            9953

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.60  E-value=1.4e-14  Score=111.42  Aligned_cols=123  Identities=20%  Similarity=0.189  Sum_probs=89.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc--CCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS--GFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||..++++|+++|++|+++.|+....... ..+...  ...++.++.+|++|.+++.++++       ++
T Consensus         6 ~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   77 (322)
T PLN02662          6 VVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVVD-------GC   77 (322)
T ss_pred             EEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHHc-------CC
Confidence            489999999999999999999999999998875432222 222211  11358899999999998887765       68


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |.+||+|+......                 .     .  .....+++|+.++.++++++...+   +..+||++||..+
T Consensus        78 d~Vih~A~~~~~~~-----------------~-----~--~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~  130 (322)
T PLN02662         78 EGVFHTASPFYHDV-----------------T-----D--PQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAA  130 (322)
T ss_pred             CEEEEeCCcccCCC-----------------C-----C--hHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHH
Confidence            99999998632100                 0     0  012458999999999999984322   4469999999753

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.59  E-value=5.8e-15  Score=113.50  Aligned_cols=116  Identities=23%  Similarity=0.220  Sum_probs=88.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+|+||..+++.|+++|++|++++|+.+....    +..   ..+.++.+|++|.+++.++++       ++|+
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~---~~~~~~~~D~~~~~~l~~~~~-------~~d~   67 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LEG---LDVEIVEGDLRDPASLRKAVA-------GCRA   67 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----ccc---CCceEEEeeCCCHHHHHHHHh-------CCCE
Confidence            58999999999999999999999999999997653221    111   247889999999998887775       6899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||+++.....                         .++....+++|+.++.++++++.    +.+.+++|++||....
T Consensus        68 vi~~a~~~~~~-------------------------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~  117 (328)
T TIGR03466        68 LFHVAADYRLW-------------------------APDPEEMYAANVEGTRNLLRAAL----EAGVERVVYTSSVATL  117 (328)
T ss_pred             EEEeceecccC-------------------------CCCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEechhhc
Confidence            99999753210                         01123458899999999999874    4445799999997544

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.59  E-value=2e-14  Score=109.87  Aligned_cols=124  Identities=21%  Similarity=0.177  Sum_probs=88.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChh-HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEK-RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +++||||+|+||.+++++|+++|  ++|++.+|... ...+..+.+..  ..++.++.+|++|++++.++++..     +
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~-----~   73 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED--NPRYRFVKGDIGDRELVSRLFTEH-----Q   73 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc--CCCcEEEEcCCcCHHHHHHHHhhc-----C
Confidence            58999999999999999999987  68888876321 11111222221  135788899999999999888754     5


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|++||+|+.....                       .+.+..+..+++|+.++.++++++.+.+.   ..++|++||..
T Consensus        74 ~d~vi~~a~~~~~~-----------------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~  127 (317)
T TIGR01181        74 PDAVVHFAAESHVD-----------------------RSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDE  127 (317)
T ss_pred             CCEEEEcccccCch-----------------------hhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccc
Confidence            99999999874321                       11223445689999999999998854432   24899999853

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.54  E-value=7.7e-14  Score=103.95  Aligned_cols=114  Identities=18%  Similarity=0.251  Sum_probs=81.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCCh-hhHHHHHHHHHhhc-CCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP-ATIHSLADFVRSQF-GKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~-g~i   78 (174)
                      +++||||+|+||+.++++|+++|++|+++.|+.++..+..   ..  ..++.++.+|++|. +++.+       .+ .++
T Consensus        19 ~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~--~~~~~~~~~Dl~d~~~~l~~-------~~~~~~   86 (251)
T PLN00141         19 TVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL---PQ--DPSLQIVRADVTEGSDKLVE-------AIGDDS   86 (251)
T ss_pred             eEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc---cc--CCceEEEEeeCCCCHHHHHH-------HhhcCC
Confidence            4899999999999999999999999999998865433221   11  12588899999983 32222       22 379


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |++|+|+|.....                  ...         ..+++|..++.++++++    ++.+.++||++||..
T Consensus        87 d~vi~~~g~~~~~------------------~~~---------~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~  134 (251)
T PLN00141         87 DAVICATGFRRSF------------------DPF---------APWKVDNFGTVNLVEAC----RKAGVTRFILVSSIL  134 (251)
T ss_pred             CEEEECCCCCcCC------------------CCC---------CceeeehHHHHHHHHHH----HHcCCCEEEEEcccc
Confidence            9999999863210                  000         01467888888888887    455668999999985

>PLN02427 UDP-apiose/xylose synthase

Probab=99.52  E-value=1.3e-13  Score=108.71  Aligned_cols=122  Identities=16%  Similarity=0.176  Sum_probs=85.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|.||..++++|+++ |++|++++|+.................++.++.+|++|.+.+.++++       ++|
T Consensus        16 ~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~-------~~d   88 (386)
T PLN02427         16 TICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK-------MAD   88 (386)
T ss_pred             EEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-------cCC
Confidence            4899999999999999999998 58999998875433222111000111358899999999988887765       589


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|||+|+...+..                +.       .+-.+.+..|+.++.++++++    ++.+ .++|++||..
T Consensus        89 ~ViHlAa~~~~~~----------------~~-------~~~~~~~~~n~~gt~~ll~aa----~~~~-~r~v~~SS~~  138 (386)
T PLN02427         89 LTINLAAICTPAD----------------YN-------TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCE  138 (386)
T ss_pred             EEEEcccccChhh----------------hh-------hChHHHHHHHHHHHHHHHHHH----HhcC-CEEEEEeeee
Confidence            9999998743210                00       001123668999999998887    3334 6899999963

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.51  E-value=1.5e-13  Score=103.23  Aligned_cols=125  Identities=26%  Similarity=0.292  Sum_probs=97.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC--CceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|.||.+.+.+|.++|+.|++++.-.....+.....+...+  .++.+...|+.|.+.+++++++.     ++
T Consensus         4 ~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----~f   78 (343)
T KOG1371|consen    4 HVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----KF   78 (343)
T ss_pred             EEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----CC
Confidence            489999999999999999999999999998744443444444443332  56999999999999999999877     69


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |.|+|.|+.....                       .+.+...+.+..|+.|++.+...+    ++.+...+||.||..
T Consensus        79 d~V~Hfa~~~~vg-----------------------eS~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssat  130 (343)
T KOG1371|consen   79 DAVMHFAALAAVG-----------------------ESMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSAT  130 (343)
T ss_pred             ceEEeehhhhccc-----------------------hhhhCchhheehhhhhHHHHHHHH----HHcCCceEEEeccee
Confidence            9999999985432                       122223456899999999998777    666667888888854

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.51  E-value=4.1e-13  Score=106.08  Aligned_cols=123  Identities=20%  Similarity=0.122  Sum_probs=89.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH--HHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE--AVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||+|+||..++++|+++|++|+++.|+......  ...++.... .++.++.+|++|.+++.++++..   .+++
T Consensus        62 kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~v~~v~~Dl~d~~~l~~~~~~~---~~~~  137 (390)
T PLN02657         62 TVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKEL-PGAEVVFGDVTDADSLRKVLFSE---GDPV  137 (390)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhc-CCceEEEeeCCCHHHHHHHHHHh---CCCC
Confidence            47999999999999999999999999999998653221  111222222 24889999999999999888743   1269


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||+|.....                 ..           ..+++|+.++.++++++    ++.+.+++|++||...
T Consensus       138 D~Vi~~aa~~~~~-----------------~~-----------~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v  185 (390)
T PLN02657        138 DVVVSCLASRTGG-----------------VK-----------DSWKIDYQATKNSLDAG----REVGAKHFVLLSAICV  185 (390)
T ss_pred             cEEEECCccCCCC-----------------Cc-----------cchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccc
Confidence            9999999752110                 00           12577888888888877    4556679999999865


Q ss_pred             c
Q 035504          159 K  159 (174)
Q Consensus       159 ~  159 (174)
                      .
T Consensus       186 ~  186 (390)
T PLN02657        186 Q  186 (390)
T ss_pred             c
Confidence            3

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.50  E-value=5.7e-13  Score=97.85  Aligned_cols=117  Identities=26%  Similarity=0.350  Sum_probs=91.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ||||||+|.||.+++++|.++|+.|+.+.|+..+........      ++.++.+|+.|.+.++++++..     .+|.+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~dl~~~~~~~~~~~~~-----~~d~v   69 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL------NVEFVIGDLTDKEQLEKLLEKA-----NIDVV   69 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT------TEEEEESETTSHHHHHHHHHHH-----TESEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc------eEEEEEeecccccccccccccc-----CceEE
Confidence            799999999999999999999999888888755433222211      5899999999999999999877     89999


Q ss_pred             EecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           82 VNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ||+|+.....                       .+.+.....++.|+.++..+++++    .+.+..++|++||.
T Consensus        70 i~~a~~~~~~-----------------------~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~sS~  117 (236)
T PF01370_consen   70 IHLAAFSSNP-----------------------ESFEDPEEIIEANVQGTRNLLEAA----REAGVKRFIFLSSA  117 (236)
T ss_dssp             EEEBSSSSHH-----------------------HHHHSHHHHHHHHHHHHHHHHHHH----HHHTTSEEEEEEEG
T ss_pred             EEeecccccc-----------------------cccccccccccccccccccccccc----cccccccccccccc
Confidence            9999874210                       011233455889999999998888    45555799999994

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.50  E-value=4.9e-13  Score=104.03  Aligned_cols=127  Identities=15%  Similarity=0.124  Sum_probs=85.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHH---HHHHHHHhhcC------C-CceeEEEeecCChhh-H-HH
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRG---LEAVEKLKHSG------F-DSVIFHQLDVADPAT-I-HS   66 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~---~~~~~~l~~~~------~-~~~~~~~~Dv~~~~~-i-~~   66 (174)
                      +++||||+|+||..++++|+++|  ++|+++.|+.+..   ++..+.+....      . .++.++.+|++++.. + ..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  6799999875421   12222222211      1 358899999986531 0 11


Q ss_pred             HHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC
Q 035504           67 LADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD  146 (174)
Q Consensus        67 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~  146 (174)
                      ...++   ..++|++||||+.....                          ..++..+++|+.++..+++.+.    +.+
T Consensus        81 ~~~~~---~~~~d~vih~a~~~~~~--------------------------~~~~~~~~~nv~g~~~ll~~a~----~~~  127 (367)
T TIGR01746        81 EWERL---AENVDTIVHNGALVNWV--------------------------YPYSELRAANVLGTREVLRLAA----SGR  127 (367)
T ss_pred             HHHHH---HhhCCEEEeCCcEeccC--------------------------CcHHHHhhhhhHHHHHHHHHHh----hCC
Confidence            11111   24799999999874311                          0123447899999999998874    344


Q ss_pred             CCeEEEEecCCCcc
Q 035504          147 LPRIVNVSSNMGKL  160 (174)
Q Consensus       147 ~g~iv~isS~~~~~  160 (174)
                      ..+++++||.....
T Consensus       128 ~~~~v~iSS~~v~~  141 (367)
T TIGR01746       128 AKPLHYVSTISVLA  141 (367)
T ss_pred             CceEEEEccccccC
Confidence            45699999986543

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.48  E-value=8.1e-13  Score=101.69  Aligned_cols=112  Identities=17%  Similarity=0.173  Sum_probs=85.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+|.||..++++|+++|++|.++.|+.+....    +..   .++.++.+|++|++++.++++       ++|+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~---~~v~~v~~Dl~d~~~l~~al~-------g~d~   67 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE---WGAELVYGDLSLPETLPPSFK-------GVTA   67 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh---cCCEEEECCCCCHHHHHHHHC-------CCCE
Confidence            48999999999999999999999999999998643221    111   248899999999998877765       7899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      +||+++....                 ...           ...++|+.++.++.+++    ++.+..++|++||..+
T Consensus        68 Vi~~~~~~~~-----------------~~~-----------~~~~~~~~~~~~l~~aa----~~~gvkr~I~~Ss~~~  113 (317)
T CHL00194         68 IIDASTSRPS-----------------DLY-----------NAKQIDWDGKLALIEAA----KAAKIKRFIFFSILNA  113 (317)
T ss_pred             EEECCCCCCC-----------------Ccc-----------chhhhhHHHHHHHHHHH----HHcCCCEEEEeccccc
Confidence            9998753210                 001           12678899999888887    5556679999998643

>PLN02686 cinnamoyl-CoA reductase

Probab=99.44  E-value=1.8e-12  Score=101.68  Aligned_cols=122  Identities=16%  Similarity=0.145  Sum_probs=87.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-----CCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-----FDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      ++|||||+|+||.+++++|+++|++|+++.|+.+...+. +++...+     ..++.++.+|++|.+++.++++      
T Consensus        55 ~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~------  127 (367)
T PLN02686         55 LVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD------  127 (367)
T ss_pred             EEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH------
Confidence            489999999999999999999999999888876543332 3332111     1247888999999999988876      


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC-CCCeEEEEe
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS-DLPRIVNVS  154 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~is  154 (174)
                       .+|.+||.++...+...            ....           ....++|+.++.++++++    ++. +..++|++|
T Consensus       128 -~~d~V~hlA~~~~~~~~------------~~~~-----------~~~~~~nv~gt~~llea~----~~~~~v~r~V~~S  179 (367)
T PLN02686        128 -GCAGVFHTSAFVDPAGL------------SGYT-----------KSMAELEAKASENVIEAC----VRTESVRKCVFTS  179 (367)
T ss_pred             -hccEEEecCeeeccccc------------cccc-----------chhhhhhHHHHHHHHHHH----HhcCCccEEEEec
Confidence             47899999987533210            0000           122578999999999887    332 356899999


Q ss_pred             cCC
Q 035504          155 SNM  157 (174)
Q Consensus       155 S~~  157 (174)
                      |..
T Consensus       180 S~~  182 (367)
T PLN02686        180 SLL  182 (367)
T ss_pred             cHH
Confidence            964

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.43  E-value=3.4e-12  Score=94.90  Aligned_cols=140  Identities=21%  Similarity=0.150  Sum_probs=98.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++|||||+|.||.++++.+.++..  +|+.++. +...-.+.+..+...  .+..++++|+.|.+.+.+++.+-     .
T Consensus         2 ~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~--~~~~fv~~DI~D~~~v~~~~~~~-----~   74 (340)
T COG1088           2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDS--PRYRFVQGDICDRELVDRLFKEY-----Q   74 (340)
T ss_pred             cEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcC--CCceEEeccccCHHHHHHHHHhc-----C
Confidence            479999999999999999999854  4666665 222222333333322  26999999999999999888765     7


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec--
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS--  155 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS--  155 (174)
                      +|+++|.|+=.+..-                       +.......+++|+.|++.|++++..+..+   =+++.||.  
T Consensus        75 ~D~VvhfAAESHVDR-----------------------SI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDE  128 (340)
T COG1088          75 PDAVVHFAAESHVDR-----------------------SIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDE  128 (340)
T ss_pred             CCeEEEechhccccc-----------------------cccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEecccc
Confidence            999999998655321                       11122233899999999999999666532   26888876  


Q ss_pred             CCCcc-----------cCCCCcceeeecc
Q 035504          156 NMGKL-----------KNTWQGAICYLTF  173 (174)
Q Consensus       156 ~~~~~-----------~~~~~~~y~~~k~  173 (174)
                      +.|..           +....++|++||+
T Consensus       129 VYG~l~~~~~~FtE~tp~~PsSPYSASKA  157 (340)
T COG1088         129 VYGDLGLDDDAFTETTPYNPSSPYSASKA  157 (340)
T ss_pred             ccccccCCCCCcccCCCCCCCCCcchhhh
Confidence            33433           2335689999985

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.43  E-value=9.6e-13  Score=99.64  Aligned_cols=102  Identities=29%  Similarity=0.426  Sum_probs=79.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|.||..++++|.++|++|+++.|+                      .+|+.+.++++++++..     .+|+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~-----~~d~   53 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------QLDLTDPEALERLLRAI-----RPDA   53 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------ccCCCCHHHHHHHHHhC-----CCCE
Confidence            58999999999999999999999999998874                      46889999988887753     6899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +||++|......                       ........+++|+.++.++++++    ++.+ .++|++||..
T Consensus        54 vi~~a~~~~~~~-----------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~v~~Ss~~  102 (287)
T TIGR01214        54 VVNTAAYTDVDG-----------------------AESDPEKAFAVNALAPQNLARAA----ARHG-ARLVHISTDY  102 (287)
T ss_pred             EEECCccccccc-----------------------cccCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEeeee
Confidence            999998643210                       00112345899999999999987    3334 4899999964

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.42  E-value=6.3e-13  Score=101.55  Aligned_cols=104  Identities=18%  Similarity=0.183  Sum_probs=78.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|.||.+++++|.++| +|+.++|...                  .+..|++|.+.+.+++++.     ++|+
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~-----~~D~   57 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------DYCGDFSNPEGVAETVRKI-----RPDV   57 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------cccCCCCCHHHHHHHHHhc-----CCCE
Confidence            48999999999999999999999 7887776521                  2357999999998887754     6899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      |||+|+......                       ..++....+++|+.++.++++++    ++.+ .++|++||.
T Consensus        58 Vih~Aa~~~~~~-----------------------~~~~~~~~~~~N~~~~~~l~~aa----~~~g-~~~v~~Ss~  105 (299)
T PRK09987         58 IVNAAAHTAVDK-----------------------AESEPEFAQLLNATSVEAIAKAA----NEVG-AWVVHYSTD  105 (299)
T ss_pred             EEECCccCCcch-----------------------hhcCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEccc
Confidence            999998754310                       00111234789999999999988    4444 489999885

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.42  E-value=4.2e-13  Score=102.72  Aligned_cols=115  Identities=23%  Similarity=0.336  Sum_probs=78.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh--hcCCcc
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS--QFGKLD   79 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~--~~g~id   79 (174)
                      +|||||+|.||..++++|+++|++++++.++.......           .....+|+.|..+.+.+++++.+  .++++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-----------HhhhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence            79999999999999999999999777666553321111           01124566666666655555442  345799


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|||+||.....                .+.      .   ...+++|+.++..+++++    ++.+ .++|++||..
T Consensus        71 ~Vih~A~~~~~~----------------~~~------~---~~~~~~n~~~t~~ll~~~----~~~~-~~~i~~SS~~  118 (308)
T PRK11150         71 AIFHEGACSSTT----------------EWD------G---KYMMDNNYQYSKELLHYC----LERE-IPFLYASSAA  118 (308)
T ss_pred             EEEECceecCCc----------------CCC------h---HHHHHHHHHHHHHHHHHH----HHcC-CcEEEEcchH
Confidence            999999863211                011      0   234899999999999888    4444 3799999974

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.42  E-value=1.9e-12  Score=100.72  Aligned_cols=116  Identities=14%  Similarity=0.103  Sum_probs=82.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecC-ChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA-DPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|.||..++++|+++ |++|++++|+......    +..  ...+.++.+|++ +.+.+.++++       ++
T Consensus         3 ~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~--~~~~~~~~~Dl~~~~~~~~~~~~-------~~   69 (347)
T PRK11908          3 KVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVN--HPRMHFFEGDITINKEWIEYHVK-------KC   69 (347)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hcc--CCCeEEEeCCCCCCHHHHHHHHc-------CC
Confidence            4899999999999999999986 6999999886532221    111  124888999998 5555555443       68


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |+|||+|+...+...                       .++....+++|+.++.+++.++    ++.+ .++|++||..
T Consensus        70 d~ViH~aa~~~~~~~-----------------------~~~p~~~~~~n~~~~~~ll~aa----~~~~-~~~v~~SS~~  120 (347)
T PRK11908         70 DVILPLVAIATPATY-----------------------VKQPLRVFELDFEANLPIVRSA----VKYG-KHLVFPSTSE  120 (347)
T ss_pred             CEEEECcccCChHHh-----------------------hcCcHHHHHHHHHHHHHHHHHH----HhcC-CeEEEEecce
Confidence            999999987432110                       0011244799999999998887    3444 5999999973

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.41  E-value=1.1e-12  Score=100.33  Aligned_cols=115  Identities=20%  Similarity=0.207  Sum_probs=79.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +|||||+|.||..++++|.++|+ .|++++|.... .. ..++.      ...+..|+.+++.++.+.+.   .+.++|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~-~~-~~~~~------~~~~~~d~~~~~~~~~~~~~---~~~~~D~   69 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDG-HK-FLNLA------DLVIADYIDKEDFLDRLEKG---AFGKIEA   69 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCc-hh-hhhhh------heeeeccCcchhHHHHHHhh---ccCCCCE
Confidence            68999999999999999999998 68888765432 11 11111      13456777777666554442   3568999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +||+|+.....                         ..+.+..+++|+.++.++++++.    +.+ .++|++||..
T Consensus        70 vvh~A~~~~~~-------------------------~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~v~~SS~~  116 (314)
T TIGR02197        70 IFHQGACSDTT-------------------------ETDGEYMMENNYQYSKRLLDWCA----EKG-IPFIYASSAA  116 (314)
T ss_pred             EEECccccCcc-------------------------ccchHHHHHHHHHHHHHHHHHHH----HhC-CcEEEEccHH
Confidence            99999863210                         11223458999999999999873    334 4899999954

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.40  E-value=3.2e-12  Score=107.40  Aligned_cols=123  Identities=19%  Similarity=0.236  Sum_probs=85.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHC--CCeEEEEeeChhHHHHHHHHHhh-cCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASN--GIIVVLTARDEKRGLEAVEKLKH-SGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++|||||+|.||..++++|+++  +++|+.+++.... .+. ..+.. ....++.++.+|++|.+.+.+++..     .+
T Consensus         8 ~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~-~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----~~   80 (668)
T PLN02260          8 NILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNL-KNLNPSKSSPNFKFVKGDIASADLVNYLLIT-----EG   80 (668)
T ss_pred             EEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chh-hhhhhcccCCCeEEEECCCCChHHHHHHHhh-----cC
Confidence            4899999999999999999998  6789888874211 111 11111 1123588999999998877665432     27


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSN  156 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~  156 (174)
                      +|+|||+|+......                       ...+....+++|+.++.++++++    ++.+ ..++|++||.
T Consensus        81 ~D~ViHlAa~~~~~~-----------------------~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~vkr~I~~SS~  133 (668)
T PLN02260         81 IDTIMHFAAQTHVDN-----------------------SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTD  133 (668)
T ss_pred             CCEEEECCCccCchh-----------------------hhhCHHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEcch
Confidence            999999998743210                       01111345789999999999887    3333 4699999996


Q ss_pred             C
Q 035504          157 M  157 (174)
Q Consensus       157 ~  157 (174)
                      .
T Consensus       134 ~  134 (668)
T PLN02260        134 E  134 (668)
T ss_pred             H
Confidence            3

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.40  E-value=9.1e-12  Score=88.32  Aligned_cols=106  Identities=20%  Similarity=0.178  Sum_probs=83.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      |+|+||+|.+|..++++|+++|++|+++.|++++..+         ..++.++.+|+.|.+++.+++.       +.|.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~-------~~d~v   64 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALK-------GADAV   64 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHT-------TSSEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhh-------hcchh
Confidence            6899999999999999999999999999999876554         2469999999999988887776       79999


Q ss_pred             EecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCccc
Q 035504           82 VNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLK  161 (174)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  161 (174)
                      |+++|....                                    +    ...++.++..+++.+..++|++||......
T Consensus        65 i~~~~~~~~------------------------------------~----~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~  104 (183)
T PF13460_consen   65 IHAAGPPPK------------------------------------D----VDAAKNIIEAAKKAGVKRVVYLSSAGVYRD  104 (183)
T ss_dssp             EECCHSTTT------------------------------------H----HHHHHHHHHHHHHTTSSEEEEEEETTGTTT
T ss_pred             hhhhhhhcc------------------------------------c----ccccccccccccccccccceeeeccccCCC
Confidence            999975210                                    0    233445555557777789999999876554


Q ss_pred             CC
Q 035504          162 NT  163 (174)
Q Consensus       162 ~~  163 (174)
                      .+
T Consensus       105 ~~  106 (183)
T PF13460_consen  105 PP  106 (183)
T ss_dssp             CT
T ss_pred             CC
Confidence            33

...

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.39  E-value=1.6e-12  Score=102.05  Aligned_cols=117  Identities=19%  Similarity=0.142  Sum_probs=82.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|.||.+++++|.++|++|+.++|......      .... ....++.+|++|.+.+..++.       ++|+
T Consensus        23 ~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~~-~~~~~~~~Dl~d~~~~~~~~~-------~~D~   88 (370)
T PLN02695         23 RICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SEDM-FCHEFHLVDLRVMENCLKVTK-------GVDH   88 (370)
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------cccc-ccceEEECCCCCHHHHHHHHh-------CCCE
Confidence            4899999999999999999999999999998643211      0000 124677899999887766554       6899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |||+|+......        .   ...           .....+..|+.++.++++++    ++.+..++|++||..
T Consensus        89 Vih~Aa~~~~~~--------~---~~~-----------~~~~~~~~N~~~t~nll~aa----~~~~vk~~V~~SS~~  139 (370)
T PLN02695         89 VFNLAADMGGMG--------F---IQS-----------NHSVIMYNNTMISFNMLEAA----RINGVKRFFYASSAC  139 (370)
T ss_pred             EEEcccccCCcc--------c---ccc-----------CchhhHHHHHHHHHHHHHHH----HHhCCCEEEEeCchh
Confidence            999998643210        0   000           01123678999999999887    444556999999963

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.39  E-value=2.1e-12  Score=98.70  Aligned_cols=118  Identities=25%  Similarity=0.195  Sum_probs=86.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc-cE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL-DI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i-d~   80 (174)
                      +|||||+|.||..++++|.++|++|+.++|.........        ..+.++.+|++|.+.+.+..+       .. |.
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~-------~~~d~   67 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAK-------GVPDA   67 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHh-------cCCCE
Confidence            799999999999999999999999999999765422221        247888999999855555554       33 99


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +||+|+........                    .+  .....+++|+.++.++++++    ++.+..++|+.||.....
T Consensus        68 vih~aa~~~~~~~~--------------------~~--~~~~~~~~nv~gt~~ll~aa----~~~~~~~~v~~ss~~~~~  121 (314)
T COG0451          68 VIHLAAQSSVPDSN--------------------AS--DPAEFLDVNVDGTLNLLEAA----RAAGVKRFVFASSVSVVY  121 (314)
T ss_pred             EEEccccCchhhhh--------------------hh--CHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCCCceEC
Confidence            99999986532100                    00  12345899999999999998    445668999966655443

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.37  E-value=4.6e-12  Score=94.36  Aligned_cols=115  Identities=17%  Similarity=0.231  Sum_probs=70.9

Q ss_pred             EecCCCchhHHHHHHHHHCCC--eEEEEeeChhH--H-HHHHHHHhhc---------CCCceeEEEeecCChh------h
Q 035504            4 VTGANKGIGYETVRQLASNGI--IVVLTARDEKR--G-LEAVEKLKHS---------GFDSVIFHQLDVADPA------T   63 (174)
Q Consensus         4 itGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~--~-~~~~~~l~~~---------~~~~~~~~~~Dv~~~~------~   63 (174)
                      ||||+|.+|..+.++|++++.  +|+++.|....  + ++..+.+.+.         ..+++.++..|++++.      +
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  89999997532  2 2222222211         1468999999999864      2


Q ss_pred             HHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhcc
Q 035504           64 IHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQ  143 (174)
Q Consensus        64 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~  143 (174)
                      .+.+.+       .+|++||||+..+...+                          +++.+++|+.|+..+++.+.    
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~~~--------------------------~~~~~~~NV~gt~~ll~la~----  123 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFNAP--------------------------YSELRAVNVDGTRNLLRLAA----  123 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS-S----------------------------EEHHHHHHHHHHHHHHHT----
T ss_pred             hhcccc-------ccceeeecchhhhhccc--------------------------chhhhhhHHHHHHHHHHHHH----
Confidence            333333       68999999987654211                          12238999999999999883    


Q ss_pred             CCCCCeEEEEec
Q 035504          144 LSDLPRIVNVSS  155 (174)
Q Consensus       144 ~~~~g~iv~isS  155 (174)
                      +.+..+++|+||
T Consensus       124 ~~~~~~~~~iST  135 (249)
T PF07993_consen  124 QGKRKRFHYIST  135 (249)
T ss_dssp             SSS---EEEEEE
T ss_pred             hccCcceEEecc
Confidence            333349999999

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK05865 hypothetical protein; Provisional

Probab=99.37  E-value=5.6e-12  Score=107.08  Aligned_cols=103  Identities=26%  Similarity=0.239  Sum_probs=83.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+|+||.+++++|+++|++|++++|+....      +    ..++.++.+|++|.+++.++++       ++|+
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~----~~~v~~v~gDL~D~~~l~~al~-------~vD~   64 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W----PSSADFIAADIRDATAVESAMT-------GADV   64 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c----ccCceEEEeeCCCHHHHHHHHh-------CCCE
Confidence            489999999999999999999999999999874321      1    1247889999999999887776       5899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      +||+|+...+                                .+++|+.++.++++++    ++.+.++||++||.
T Consensus        65 VVHlAa~~~~--------------------------------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~  104 (854)
T PRK05865         65 VAHCAWVRGR--------------------------------NDHINIDGTANVLKAM----AETGTGRIVFTSSG  104 (854)
T ss_pred             EEECCCcccc--------------------------------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCc
Confidence            9999975210                                1689999998887776    55566799999996

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.36  E-value=8.6e-12  Score=104.55  Aligned_cols=123  Identities=22%  Similarity=0.180  Sum_probs=84.4

Q ss_pred             CEEEecCCCchhHHHHHHHH--HCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhH--HHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLA--SNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATI--HSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~--~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i--~~~~~~~~~~~g   76 (174)
                      ++|||||+|.||..++++|+  .+|++|++++|+... ..........+..++.++..|++|.+..  ...++++    .
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~   76 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G   76 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence            58999999999999999999  579999999996432 2221211221224588999999985421  1122222    4


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|++||+||......                       .   .....++|+.++.++++++    ++.+..++|++||.
T Consensus        77 ~~D~Vih~Aa~~~~~~-----------------------~---~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~~SS~  126 (657)
T PRK07201         77 DIDHVVHLAAIYDLTA-----------------------D---EEAQRAANVDGTRNVVELA----ERLQAATFHHVSSI  126 (657)
T ss_pred             CCCEEEECceeecCCC-----------------------C---HHHHHHHHhHHHHHHHHHH----HhcCCCeEEEEecc
Confidence            7999999998743210                       0   1234789999999998887    44455799999997


Q ss_pred             CC
Q 035504          157 MG  158 (174)
Q Consensus       157 ~~  158 (174)
                      ..
T Consensus       127 ~v  128 (657)
T PRK07201        127 AV  128 (657)
T ss_pred             cc
Confidence            54

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.34  E-value=6.8e-12  Score=92.13  Aligned_cols=69  Identities=20%  Similarity=0.217  Sum_probs=56.5

Q ss_pred             CCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEecccc
Q 035504            8 NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus         8 ~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~ag~   87 (174)
                      +||||+++|++|+++|++|+++++...        +..     .....+|+++.++++++++++.+.++++|++|||||+
T Consensus        24 SGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~-----~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv   90 (227)
T TIGR02114        24 TGHLGKIITETFLSAGHEVTLVTTKRA--------LKP-----EPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAV   90 (227)
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc-----ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence            689999999999999999999876311        110     0124689999999999999999999999999999997


Q ss_pred             cC
Q 035504           88 FG   89 (174)
Q Consensus        88 ~~   89 (174)
                      ..
T Consensus        91 ~d   92 (227)
T TIGR02114        91 SD   92 (227)
T ss_pred             cc
Confidence            53

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.32  E-value=2.4e-11  Score=85.94  Aligned_cols=84  Identities=20%  Similarity=0.158  Sum_probs=70.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+ |+|.++++.|+++|++|++++|+.+...+....+..  +.++.++.+|++|++++.++++++.+.++++|.
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT--PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            47999998 788889999999999999999987665555544432  235888999999999999999999999999999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+..=.
T Consensus        79 lv~~vh~   85 (177)
T PRK08309         79 AVAWIHS   85 (177)
T ss_pred             EEEeccc
Confidence            9987733

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.32  E-value=1.1e-11  Score=103.93  Aligned_cols=115  Identities=14%  Similarity=0.074  Sum_probs=82.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhh-HHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT-IHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~-i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|.||..++++|+++ |++|+.++|.......    +..  ..++.++.+|++|.++ ++++++       ++
T Consensus       317 ~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~--~~~~~~~~gDl~d~~~~l~~~l~-------~~  383 (660)
T PRK08125        317 RVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLG--HPRFHFVEGDISIHSEWIEYHIK-------KC  383 (660)
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcC--CCceEEEeccccCcHHHHHHHhc-------CC
Confidence            4899999999999999999986 7999999987543211    111  1258888999998655 343443       68


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      |+|||+|+...+...               .        +.....+++|+.++.++.+++.    +.+ .++|++||.
T Consensus       384 D~ViHlAa~~~~~~~---------------~--------~~~~~~~~~Nv~~t~~ll~a~~----~~~-~~~V~~SS~  433 (660)
T PRK08125        384 DVVLPLVAIATPIEY---------------T--------RNPLRVFELDFEENLKIIRYCV----KYN-KRIIFPSTS  433 (660)
T ss_pred             CEEEECccccCchhh---------------c--------cCHHHHHHhhHHHHHHHHHHHH----hcC-CeEEEEcch
Confidence            999999997543110               0        0112347899999999999884    344 589999996

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.30  E-value=8.1e-12  Score=95.30  Aligned_cols=103  Identities=17%  Similarity=0.202  Sum_probs=76.7

Q ss_pred             EEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEE
Q 035504            3 VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILV   82 (174)
Q Consensus         3 litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li   82 (174)
                      |||||+|.||..+++.|+++|++|+++.+.                     ..+|++|.++++++++..     ++|+||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vi   54 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------KELDLTRQADVEAFFAKE-----KPTYVI   54 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------ccCCCCCHHHHHHHHhcc-----CCCEEE
Confidence            699999999999999999999987765322                     147999999888877653     689999


Q ss_pred             ecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           83 NNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |+|+.......                      ..+.....+++|+.++..+++++    ++.+.+++|++||..
T Consensus        55 h~A~~~~~~~~----------------------~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~SS~~  103 (306)
T PLN02725         55 LAAAKVGGIHA----------------------NMTYPADFIRENLQIQTNVIDAA----YRHGVKKLLFLGSSC  103 (306)
T ss_pred             Eeeeeecccch----------------------hhhCcHHHHHHHhHHHHHHHHHH----HHcCCCeEEEeCcee
Confidence            99987432100                      00011234889999999999888    444557899999963

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.29  E-value=1.6e-11  Score=98.41  Aligned_cols=114  Identities=19%  Similarity=0.165  Sum_probs=79.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH-HHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE-AVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|.||..++++|+++|++|+++++......+ ....+   ...++.++..|+.+..     +       .++|
T Consensus       121 kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~---~~~~~~~i~~D~~~~~-----l-------~~~D  185 (442)
T PLN02206        121 RVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF---SNPNFELIRHDVVEPI-----L-------LEVD  185 (442)
T ss_pred             EEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc---cCCceEEEECCccChh-----h-------cCCC
Confidence            48999999999999999999999999998864322111 11111   1124777888886642     1       1589


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      .|||+|+...+..                .       .++....+++|+.++.++++++    ++.+ .++|++||..
T Consensus       186 ~ViHlAa~~~~~~----------------~-------~~~p~~~~~~Nv~gt~nLleaa----~~~g-~r~V~~SS~~  235 (442)
T PLN02206        186 QIYHLACPASPVH----------------Y-------KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSE  235 (442)
T ss_pred             EEEEeeeecchhh----------------h-------hcCHHHHHHHHHHHHHHHHHHH----HHhC-CEEEEECChH
Confidence            9999998743211                0       0012345899999999999988    4444 4899999974

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.28  E-value=1.1e-11  Score=94.19  Aligned_cols=102  Identities=26%  Similarity=0.403  Sum_probs=75.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||||++|-||.++.+.|.++|++++.++|.                      ..|++|.+.+.+++++.     ++|+
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~-----~pd~   54 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS----------------------DLDLTDPEAVAKLLEAF-----KPDV   54 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------CS-TTSHHHHHHHHHHH-------SE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------hcCCCCHHHHHHHHHHh-----CCCe
Confidence            48999999999999999999999999888665                      77899999999999877     7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |||+||...+..                       -...-+..+++|+.++..+++.+    .+.+ .++|++||-.
T Consensus        55 Vin~aa~~~~~~-----------------------ce~~p~~a~~iN~~~~~~la~~~----~~~~-~~li~~STd~  103 (286)
T PF04321_consen   55 VINCAAYTNVDA-----------------------CEKNPEEAYAINVDATKNLAEAC----KERG-ARLIHISTDY  103 (286)
T ss_dssp             EEE------HHH-----------------------HHHSHHHHHHHHTHHHHHHHHHH----HHCT--EEEEEEEGG
T ss_pred             EeccceeecHHh-----------------------hhhChhhhHHHhhHHHHHHHHHH----HHcC-CcEEEeeccE
Confidence            999998854210                       11223355899999999999998    4444 7999999963

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.24  E-value=7e-11  Score=94.62  Aligned_cols=115  Identities=22%  Similarity=0.159  Sum_probs=79.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+|.||..++++|+++|++|++++|......+....+.  ...++.++..|+.+..     +       .++|+
T Consensus       122 kILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~-----~-------~~~D~  187 (436)
T PLN02166        122 RIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF--GNPRFELIRHDVVEPI-----L-------LEVDQ  187 (436)
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc--cCCceEEEECcccccc-----c-------cCCCE
Confidence            48999999999999999999999999999875322112111121  1124777788886542     1       26899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |||+|+...+...              .         .+....+++|+.++.+++.++    ++.+ .++|++||..
T Consensus       188 ViHlAa~~~~~~~--------------~---------~~p~~~~~~Nv~gT~nLleaa----~~~g-~r~V~~SS~~  236 (436)
T PLN02166        188 IYHLACPASPVHY--------------K---------YNPVKTIKTNVMGTLNMLGLA----KRVG-ARFLLTSTSE  236 (436)
T ss_pred             EEECceeccchhh--------------c---------cCHHHHHHHHHHHHHHHHHHH----HHhC-CEEEEECcHH
Confidence            9999987432110              0         011345899999999999888    3334 4899998864

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.20  E-value=1.1e-10  Score=87.34  Aligned_cols=116  Identities=24%  Similarity=0.330  Sum_probs=89.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      +||||++|-+|.++++.|. .+++|+.+++..                      +|++|.+.+.+++.+.     ++|++
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~-----~PDvV   54 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------LDITDPDAVLEVIRET-----RPDVV   54 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------ccccChHHHHHHHHhh-----CCCEE
Confidence            7999999999999999999 668898887763                      8999999999999988     89999


Q ss_pred             EecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC---C
Q 035504           82 VNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM---G  158 (174)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~---~  158 (174)
                      ||+|++.....                       .+.+-+..+.+|..++.++++++    .+.+ ..+|++|+=.   |
T Consensus        55 In~AAyt~vD~-----------------------aE~~~e~A~~vNa~~~~~lA~aa----~~~g-a~lVhiSTDyVFDG  106 (281)
T COG1091          55 INAAAYTAVDK-----------------------AESEPELAFAVNATGAENLARAA----AEVG-ARLVHISTDYVFDG  106 (281)
T ss_pred             EECcccccccc-----------------------ccCCHHHHHHhHHHHHHHHHHHH----HHhC-CeEEEeecceEecC
Confidence            99999854321                       11123455999999999999998    4443 7899999743   3


Q ss_pred             cccC--------CCCcceeeecc
Q 035504          159 KLKN--------TWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~--------~~~~~y~~~k~  173 (174)
                      ..+.        ...+.|+.+|+
T Consensus       107 ~~~~~Y~E~D~~~P~nvYG~sKl  129 (281)
T COG1091         107 EKGGPYKETDTPNPLNVYGRSKL  129 (281)
T ss_pred             CCCCCCCCCCCCCChhhhhHHHH
Confidence            3322        13466777664

>PRK12320 hypothetical protein; Provisional

Probab=99.20  E-value=1.8e-10  Score=96.13  Aligned_cols=104  Identities=21%  Similarity=0.227  Sum_probs=78.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|.||..++++|.++|++|++++|....       ..   ..++.++.+|++|.. +.+++       .++|.
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-------~~---~~~ve~v~~Dl~d~~-l~~al-------~~~D~   63 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-------AL---DPRVDYVCASLRNPV-LQELA-------GEADA   63 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-------cc---cCCceEEEccCCCHH-HHHHh-------cCCCE
Confidence            48999999999999999999999999999986432       00   124788999999873 43333       26899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      +||+|+....                    .           ...+|+.++.++++++    ++.+ .++|++||..|
T Consensus        64 VIHLAa~~~~--------------------~-----------~~~vNv~Gt~nLleAA----~~~G-vRiV~~SS~~G  105 (699)
T PRK12320         64 VIHLAPVDTS--------------------A-----------PGGVGITGLAHVANAA----ARAG-ARLLFVSQAAG  105 (699)
T ss_pred             EEEcCccCcc--------------------c-----------hhhHHHHHHHHHHHHH----HHcC-CeEEEEECCCC
Confidence            9999975210                    0           0358999999998887    4555 48999998754

>PLN02778 3,5-epimerase/4-reductase

Probab=99.19  E-value=1.6e-10  Score=88.32  Aligned_cols=100  Identities=19%  Similarity=0.203  Sum_probs=66.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|.||..++++|.++|++|++..                         .|+.|.+.+...+...     ++|+
T Consensus        11 kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------------~~~~~~~~v~~~l~~~-----~~D~   60 (298)
T PLN02778         11 KFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------------GRLENRASLEADIDAV-----KPTH   60 (298)
T ss_pred             eEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------------CccCCHHHHHHHHHhc-----CCCE
Confidence            489999999999999999999999986432                         1233444444444432     6899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS  155 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS  155 (174)
                      +||+||..+....              +|      ..++....+++|+.++.++++++    ++.+. +.+++||
T Consensus        61 ViH~Aa~~~~~~~--------------~~------~~~~p~~~~~~Nv~gt~~ll~aa----~~~gv-~~v~~sS  110 (298)
T PLN02778         61 VFNAAGVTGRPNV--------------DW------CESHKVETIRANVVGTLTLADVC----RERGL-VLTNYAT  110 (298)
T ss_pred             EEECCcccCCCCc--------------hh------hhhCHHHHHHHHHHHHHHHHHHH----HHhCC-CEEEEec
Confidence            9999997542100              00      11122356899999999999998    33333 3455554

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.18  E-value=7e-11  Score=91.30  Aligned_cols=124  Identities=18%  Similarity=0.147  Sum_probs=89.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||+|.+|+.++.+|.+++  .++.+++..+.. .....+.......++...++|+.|..++.+++.       +.
T Consensus         6 ~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~-~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------~~   77 (361)
T KOG1430|consen    6 SVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQ-SNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------GA   77 (361)
T ss_pred             EEEEECCccHHHHHHHHHHHhcccccEEEEeccCccc-cccchhhhcccCCceeEEecchhhhhhhhhhcc-------Cc
Confidence            58999999999999999999998  679999887542 112222221133569999999999999888776       66


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                       .+||+|....+..            -.           .+.+.++++|+.|+.++..++    ++.+..++|++||..=
T Consensus        78 -~Vvh~aa~~~~~~------------~~-----------~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~V  129 (361)
T KOG1430|consen   78 -VVVHCAASPVPDF------------VE-----------NDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAYV  129 (361)
T ss_pred             -eEEEeccccCccc------------cc-----------cchhhheeecchhHHHHHHHH----HHhCCCEEEEecCceE
Confidence             6777775532210            00           122345899999999998888    6677789999999764


Q ss_pred             cc
Q 035504          159 KL  160 (174)
Q Consensus       159 ~~  160 (174)
                      ..
T Consensus       130 vf  131 (361)
T KOG1430|consen  130 VF  131 (361)
T ss_pred             Ee
Confidence            44

>PLN02996 fatty acyl-CoA reductase

Probab=99.11  E-value=1.5e-09  Score=88.32  Aligned_cols=121  Identities=17%  Similarity=0.127  Sum_probs=80.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC---CeEEEEeeChhH--HH-HHHHHH---------hhcC--------CCceeEEEee
Q 035504            1 YAVVTGANKGIGYETVRQLASNG---IIVVLTARDEKR--GL-EAVEKL---------KHSG--------FDSVIFHQLD   57 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g---~~v~~~~r~~~~--~~-~~~~~l---------~~~~--------~~~~~~~~~D   57 (174)
                      +++||||+|.||..++..|++.+   .+|++..|....  .. ....++         .+..        ..++.++..|
T Consensus        13 ~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GD   92 (491)
T PLN02996         13 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGD   92 (491)
T ss_pred             eEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecc
Confidence            58999999999999999999864   357888885421  11 111111         1111        1468999999


Q ss_pred             cCCh-------hhHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhh
Q 035504           58 VADP-------ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYG  130 (174)
Q Consensus        58 v~~~-------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~  130 (174)
                      ++++       +.++++++       ++|+|||+|+...+.                          +..+..+++|+.|
T Consensus        93 l~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~--------------------------~~~~~~~~~Nv~g  139 (491)
T PLN02996         93 ISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD--------------------------ERYDVALGINTLG  139 (491)
T ss_pred             cCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc--------------------------CCHHHHHHHHHHH
Confidence            9843       33444443       689999999874321                          1123458999999


Q ss_pred             HHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504          131 SKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus       131 ~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +.++++.+...   .+..++|++||..
T Consensus       140 t~~ll~~a~~~---~~~k~~V~vST~~  163 (491)
T PLN02996        140 ALNVLNFAKKC---VKVKMLLHVSTAY  163 (491)
T ss_pred             HHHHHHHHHhc---CCCCeEEEEeeeE
Confidence            99999887321   2345899999865

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.10  E-value=5.6e-10  Score=84.58  Aligned_cols=76  Identities=12%  Similarity=0.073  Sum_probs=60.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC-cc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK-LD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~-id   79 (174)
                      +++||||+|.+|..++++|+++|++|.++.|+.+...       .   .++..+.+|+.|.+++..+++.. +.+.+ +|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------~---~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d   69 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------G---PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEIS   69 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------C---CCCccccccCCCHHHHHHHHhcc-cCcCCcee
Confidence            5899999999999999999999999999999865421       0   13566788999999999888643 33445 99


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      .++++++.
T Consensus        70 ~v~~~~~~   77 (285)
T TIGR03649        70 AVYLVAPP   77 (285)
T ss_pred             EEEEeCCC
Confidence            99998753

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.09  E-value=7.4e-10  Score=83.83  Aligned_cols=97  Identities=16%  Similarity=0.091  Sum_probs=64.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      +|||||+|.||..+++.|+++|++|++++|+.+......        . ..  ..|+.. ..       ..+.+.++|+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~-~~--~~~~~~-~~-------~~~~~~~~D~V   61 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------W-EG--YKPWAP-LA-------ESEALEGADAV   61 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------c-ee--eecccc-cc-------hhhhcCCCCEE
Confidence            589999999999999999999999999999865422110        0 00  112211 11       12334579999


Q ss_pred             EecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhh
Q 035504           82 VNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVL  138 (174)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  138 (174)
                      ||+||......                     +...+.....+++|+.++.++++++
T Consensus        62 vh~a~~~~~~~---------------------~~~~~~~~~~~~~n~~~~~~l~~a~   97 (292)
T TIGR01777        62 INLAGEPIADK---------------------RWTEERKQEIRDSRIDTTRALVEAI   97 (292)
T ss_pred             EECCCCCcccc---------------------cCCHHHHHHHHhcccHHHHHHHHHH
Confidence            99998632210                     0122233456889999999988888

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.07  E-value=3.6e-09  Score=81.49  Aligned_cols=121  Identities=19%  Similarity=0.170  Sum_probs=84.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChh--H-HHHHHH------HHhhcCCCceeEEEeecCC------hhhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEK--R-GLEAVE------KLKHSGFDSVIFHQLDVAD------PATI   64 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~--~-~~~~~~------~l~~~~~~~~~~~~~Dv~~------~~~i   64 (174)
                      ++++|||+|.+|..+.++|+.+- ++|++.-|-.+  . ..++.+      ..++...+++.++..|++.      +..+
T Consensus         2 ~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~   81 (382)
T COG3320           2 NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTW   81 (382)
T ss_pred             eEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHH
Confidence            58999999999999999999864 69999988433  1 112222      2234566789999999983      3344


Q ss_pred             HHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccC
Q 035504           65 HSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQL  144 (174)
Q Consensus        65 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~  144 (174)
                      +++.+       .+|.+|||++..+...+                          ..+....|+.|+..+++.+    ..
T Consensus        82 ~~La~-------~vD~I~H~gA~Vn~v~p--------------------------Ys~L~~~NVlGT~evlrLa----~~  124 (382)
T COG3320          82 QELAE-------NVDLIIHNAALVNHVFP--------------------------YSELRGANVLGTAEVLRLA----AT  124 (382)
T ss_pred             HHHhh-------hcceEEecchhhcccCc--------------------------HHHhcCcchHhHHHHHHHH----hc
Confidence            44444       68999999987542110                          1234789999999998887    34


Q ss_pred             CCCCeEEEEecCCC
Q 035504          145 SDLPRIVNVSSNMG  158 (174)
Q Consensus       145 ~~~g~iv~isS~~~  158 (174)
                      .+...+.|+||++-
T Consensus       125 gk~Kp~~yVSsisv  138 (382)
T COG3320         125 GKPKPLHYVSSISV  138 (382)
T ss_pred             CCCceeEEEeeeee
Confidence            44345999999864

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.04  E-value=5.4e-09  Score=86.41  Aligned_cols=121  Identities=14%  Similarity=0.208  Sum_probs=81.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC---eEEEEeeChh--HHHHHH-HHH---------hhcC--------CCceeEEEee
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI---IVVLTARDEK--RGLEAV-EKL---------KHSG--------FDSVIFHQLD   57 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~---~v~~~~r~~~--~~~~~~-~~l---------~~~~--------~~~~~~~~~D   57 (174)
                      +++||||+|.||..+++.|++.+.   +|+++.|...  ...+-. +++         ++..        ..++.++..|
T Consensus       121 ~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GD  200 (605)
T PLN02503        121 NFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGN  200 (605)
T ss_pred             EEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEee
Confidence            489999999999999999998753   6788888532  122211 121         1211        2468899999


Q ss_pred             cCChh------hHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhH
Q 035504           58 VADPA------TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGS  131 (174)
Q Consensus        58 v~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~  131 (174)
                      +++.+      ..+.+.+       .+|++||+|+.....                          +..+..+++|+.|+
T Consensus       201 l~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f~--------------------------~~~~~a~~vNV~GT  247 (605)
T PLN02503        201 VCESNLGLEPDLADEIAK-------EVDVIINSAANTTFD--------------------------ERYDVAIDINTRGP  247 (605)
T ss_pred             CCCcccCCCHHHHHHHHh-------cCCEEEECccccccc--------------------------cCHHHHHHHHHHHH
Confidence            99873      3333322       589999999874321                          12345589999999


Q ss_pred             HHHHHhhhhhccCCCCCeEEEEecCC
Q 035504          132 KRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus       132 ~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      .++++.+...   ....++|++||..
T Consensus       248 ~nLLelA~~~---~~lk~fV~vSTay  270 (605)
T PLN02503        248 CHLMSFAKKC---KKLKLFLQVSTAY  270 (605)
T ss_pred             HHHHHHHHHc---CCCCeEEEccCce
Confidence            9999887321   1235789988854

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.03  E-value=3.1e-10  Score=84.08  Aligned_cols=142  Identities=18%  Similarity=0.116  Sum_probs=97.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHH---HHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA---VEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++||||-+|--|..+++.|++.|+.|..+.|+.......   +.++.-....++....+|++|...+.++++++     .
T Consensus         4 ~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-----~   78 (345)
T COG1089           4 VALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-----Q   78 (345)
T ss_pred             eEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc-----C
Confidence            589999999999999999999999999999874422111   11222222235889999999999999999998     8


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|-++|.++..+...+               |...        ....+++..|+.+|..++- .+. .+.-++ +..|.+
T Consensus        79 PdEIYNLaAQS~V~vS---------------Fe~P--------~~T~~~~~iGtlrlLEaiR-~~~-~~~~rf-YQAStS  132 (345)
T COG1089          79 PDEIYNLAAQSHVGVS---------------FEQP--------EYTADVDAIGTLRLLEAIR-ILG-EKKTRF-YQASTS  132 (345)
T ss_pred             chhheecccccccccc---------------ccCc--------ceeeeechhHHHHHHHHHH-HhC-CcccEE-EecccH
Confidence            9999999998765421               1222        2237889999999988762 222 222344 444433


Q ss_pred             Cccc------------CCCCcceeeecc
Q 035504          158 GKLK------------NTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~------------~~~~~~y~~~k~  173 (174)
                      -++|            ..+.++|+.+|-
T Consensus       133 E~fG~v~~~pq~E~TPFyPrSPYAvAKl  160 (345)
T COG1089         133 ELYGLVQEIPQKETTPFYPRSPYAVAKL  160 (345)
T ss_pred             HhhcCcccCccccCCCCCCCCHHHHHHH
Confidence            3322            224678887773

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.91  E-value=1e-08  Score=86.45  Aligned_cols=100  Identities=18%  Similarity=0.154  Sum_probs=71.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|.||.++++.|.++|++|...                         ..|++|.+.+...+.+.     ++|+
T Consensus       382 kiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------------~~~l~d~~~v~~~i~~~-----~pd~  431 (668)
T PLN02260        382 KFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------------KGRLEDRSSLLADIRNV-----KPTH  431 (668)
T ss_pred             eEEEECCCchHHHHHHHHHHhCCCeEEee-------------------------ccccccHHHHHHHHHhh-----CCCE
Confidence            48999999999999999999999887311                         13567777777776654     6899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS  155 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS  155 (174)
                      |||+|+..+...                    .+...++-...+++|+.++.++++++    ++.+. +++++||
T Consensus       432 Vih~Aa~~~~~~--------------------~~~~~~~~~~~~~~N~~gt~~l~~a~----~~~g~-~~v~~Ss  481 (668)
T PLN02260        432 VFNAAGVTGRPN--------------------VDWCESHKVETIRANVVGTLTLADVC----RENGL-LMMNFAT  481 (668)
T ss_pred             EEECCcccCCCC--------------------CChHHhCHHHHHHHHhHHHHHHHHHH----HHcCC-eEEEEcc
Confidence            999999754210                    00111223455899999999999998    44443 4566655

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=98.82  E-value=1.6e-07  Score=71.19  Aligned_cols=145  Identities=18%  Similarity=0.140  Sum_probs=104.2

Q ss_pred             CEEEecC-CCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC--
Q 035504            1 YAVVTGA-NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK--   77 (174)
Q Consensus         1 ~~litGa-~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~--   77 (174)
                      ++||.|. ..-+++.+|.-|-++|+-|+++..+.++.+...    +.....+..+..|..+..++...+.++.+....  
T Consensus         5 vVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve----~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~   80 (299)
T PF08643_consen    5 VVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVE----SEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPH   80 (299)
T ss_pred             EEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHH----hccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCC
Confidence            4788885 799999999999999999999998865433322    222234888888988888888888877765542  


Q ss_pred             ------------ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccC-
Q 035504           78 ------------LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQL-  144 (174)
Q Consensus        78 ------------id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-  144 (174)
                                  +..+|......++                  -.++++++.+.|.+.++.|+..++..+|.++|+|+. 
T Consensus        81 ~p~~~~~~h~l~L~svi~~Psl~yp------------------~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~  142 (299)
T PF08643_consen   81 VPFPGAPPHHLQLKSVIFIPSLSYP------------------TGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSR  142 (299)
T ss_pred             CCCCCCCCceeEEEEEEEecCCCCC------------------CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                        2333333332221                  134456777888888999999999999999999988 


Q ss_pred             --CCCCeEEEEecCCCcccCCCCcc
Q 035504          145 --SDLPRIVNVSSNMGKLKNTWQGA  167 (174)
Q Consensus       145 --~~~g~iv~isS~~~~~~~~~~~~  167 (174)
                        ++...|++.-|+......|..+.
T Consensus       143 ~~~~~~iil~~Psi~ssl~~Pfhsp  167 (299)
T PF08643_consen  143 SNQKSKIILFNPSISSSLNPPFHSP  167 (299)
T ss_pred             cCCCceEEEEeCchhhccCCCccCH
Confidence              55445556667778777776543

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN00016 RNA-binding protein; Provisional

Probab=98.81  E-value=2.5e-08  Score=78.68  Aligned_cols=75  Identities=21%  Similarity=0.255  Sum_probs=53.6

Q ss_pred             CEEEe----cCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHH-------HHHhhcCCCceeEEEeecCChhhHHHHHH
Q 035504            1 YAVVT----GANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-------EKLKHSGFDSVIFHQLDVADPATIHSLAD   69 (174)
Q Consensus         1 ~~lit----Ga~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~   69 (174)
                      ++|||    ||+|.||..++++|+++|++|+++.|+........       .++..   .++.++.+|+.|   +..++.
T Consensus        54 ~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~---~~v~~v~~D~~d---~~~~~~  127 (378)
T PLN00016         54 KVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS---AGVKTVWGDPAD---VKSKVA  127 (378)
T ss_pred             eEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh---cCceEEEecHHH---HHhhhc
Confidence            48999    99999999999999999999999999865322111       12211   237888888876   333221


Q ss_pred             HHHhhcCCccEEEeccc
Q 035504           70 FVRSQFGKLDILVNNAA   86 (174)
Q Consensus        70 ~~~~~~g~id~li~~ag   86 (174)
                           ..++|+|||+++
T Consensus       128 -----~~~~d~Vi~~~~  139 (378)
T PLN00016        128 -----GAGFDVVYDNNG  139 (378)
T ss_pred             -----cCCccEEEeCCC
Confidence                 236899999875

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.80  E-value=3e-08  Score=75.46  Aligned_cols=79  Identities=24%  Similarity=0.268  Sum_probs=60.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeCh---hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDE---KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +++|+|+ ||+|++++..|++.|++ |++++|+.   +++++..+++...++ .+....+|+++.+++...++       
T Consensus       128 ~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~-------  198 (289)
T PRK12548        128 KLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP-ECIVNVYDLNDTEKLKAEIA-------  198 (289)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC-CceeEEechhhhhHHHhhhc-------
Confidence            4799999 69999999999999986 99999986   556666677755443 35566788887777665544       


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      ..|++|||..+.
T Consensus       199 ~~DilINaTp~G  210 (289)
T PRK12548        199 SSDILVNATLVG  210 (289)
T ss_pred             cCCEEEEeCCCC
Confidence            569999998664

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.79  E-value=1.2e-07  Score=85.83  Aligned_cols=125  Identities=14%  Similarity=0.065  Sum_probs=81.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC----CeEEEEeeChhHH---HHHHHHHhhc------CCCceeEEEeecCChhhH--H
Q 035504            1 YAVVTGANKGIGYETVRQLASNG----IIVVLTARDEKRG---LEAVEKLKHS------GFDSVIFHQLDVADPATI--H   65 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g----~~v~~~~r~~~~~---~~~~~~l~~~------~~~~~~~~~~Dv~~~~~i--~   65 (174)
                      +++|||++|.+|..++++|++++    ++|++..|.....   ....+.+...      ...++.++..|+++..--  .
T Consensus       973 ~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~ 1052 (1389)
T TIGR03443       973 TVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSD 1052 (1389)
T ss_pred             eEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCH
Confidence            47999999999999999999987    7888888864321   1111111111      113688999999864210  1


Q ss_pred             HHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC
Q 035504           66 SLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS  145 (174)
Q Consensus        66 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~  145 (174)
                      ..+.++   ...+|++||||+..+...                       .   +......|+.|+..+++.+.    +.
T Consensus      1053 ~~~~~l---~~~~d~iiH~Aa~~~~~~-----------------------~---~~~~~~~nv~gt~~ll~~a~----~~ 1099 (1389)
T TIGR03443      1053 EKWSDL---TNEVDVIIHNGALVHWVY-----------------------P---YSKLRDANVIGTINVLNLCA----EG 1099 (1389)
T ss_pred             HHHHHH---HhcCCEEEECCcEecCcc-----------------------C---HHHHHHhHHHHHHHHHHHHH----hC
Confidence            112222   236899999998743210                       1   11224679999999998873    34


Q ss_pred             CCCeEEEEecCCC
Q 035504          146 DLPRIVNVSSNMG  158 (174)
Q Consensus       146 ~~g~iv~isS~~~  158 (174)
                      +..+++|+||...
T Consensus      1100 ~~~~~v~vSS~~v 1112 (1389)
T TIGR03443      1100 KAKQFSFVSSTSA 1112 (1389)
T ss_pred             CCceEEEEeCeee
Confidence            4468999999644

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.78  E-value=6.5e-08  Score=71.24  Aligned_cols=74  Identities=26%  Similarity=0.336  Sum_probs=60.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      |+|+||+|.+|+.+++.|++.+++|.++.|+..  .+..++++..+   +.++.+|+.|.+++.++++       ++|.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~g---~~vv~~d~~~~~~l~~al~-------g~d~v   68 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQALG---AEVVEADYDDPESLVAALK-------GVDAV   68 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHTT---TEEEES-TT-HHHHHHHHT-------TCSEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhccc---ceEeecccCCHHHHHHHHc-------CCceE
Confidence            689999999999999999999999999999863  23344555543   6778999999999988887       89999


Q ss_pred             Eecccc
Q 035504           82 VNNAAI   87 (174)
Q Consensus        82 i~~ag~   87 (174)
                      |++.+.
T Consensus        69 ~~~~~~   74 (233)
T PF05368_consen   69 FSVTPP   74 (233)
T ss_dssp             EEESSC
T ss_pred             EeecCc
Confidence            988875

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.77  E-value=3.3e-08  Score=78.22  Aligned_cols=76  Identities=18%  Similarity=0.200  Sum_probs=57.9

Q ss_pred             CEEEecC----------------CCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhH
Q 035504            1 YAVVTGA----------------NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATI   64 (174)
Q Consensus         1 ~~litGa----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i   64 (174)
                      ++|||||                ||++|.++|++|+++|++|++++++.+ ..         .+.  ....+|+++.+++
T Consensus       190 ~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~~~--~~~~~dv~~~~~~  257 (399)
T PRK05579        190 RVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------TPA--GVKRIDVESAQEM  257 (399)
T ss_pred             EEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------CCC--CcEEEccCCHHHH
Confidence            4899999                445999999999999999999987642 10         011  1346799888887


Q ss_pred             HHHHHHHHhhcCCccEEEecccccCcc
Q 035504           65 HSLADFVRSQFGKLDILVNNAAIFGVS   91 (174)
Q Consensus        65 ~~~~~~~~~~~g~id~li~~ag~~~~~   91 (174)
                      .+.+.   +.++++|++|||||+....
T Consensus       258 ~~~v~---~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        258 LDAVL---AALPQADIFIMAAAVADYR  281 (399)
T ss_pred             HHHHH---HhcCCCCEEEEcccccccc
Confidence            76655   5678999999999986544

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.72  E-value=1.2e-07  Score=69.83  Aligned_cols=74  Identities=15%  Similarity=0.251  Sum_probs=48.8

Q ss_pred             EEecCCCc-hhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            3 VVTGANKG-IGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         3 litGa~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      .||..|+| +|.++|++|+++|++|++++|....        ......++.++.++     +.+++.+.+.+.++++|++
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~~~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~Div   85 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------KPEPHPNLSIIEIE-----NVDDLLETLEPLVKDHDVL   85 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------cCCCCCCeEEEEEe-----cHHHHHHHHHHHhcCCCEE
Confidence            46666654 9999999999999999999875321        00011235555532     3333444444555689999


Q ss_pred             EecccccC
Q 035504           82 VNNAAIFG   89 (174)
Q Consensus        82 i~~ag~~~   89 (174)
                      |||||+..
T Consensus        86 Ih~AAvsd   93 (229)
T PRK06732         86 IHSMAVSD   93 (229)
T ss_pred             EeCCccCC
Confidence            99999864

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.71  E-value=4.9e-08  Score=72.75  Aligned_cols=120  Identities=19%  Similarity=0.262  Sum_probs=90.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++-|-||++.+|+.++..|++.|-+|++-+|..+..-...+-+...+  .+.++..|+.|+++|+++++       .-++
T Consensus        63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLG--Qvl~~~fd~~DedSIr~vvk-------~sNV  133 (391)
T KOG2865|consen   63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLG--QVLFMKFDLRDEDSIRAVVK-------HSNV  133 (391)
T ss_pred             EEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccccc--ceeeeccCCCCHHHHHHHHH-------hCcE
Confidence            35678999999999999999999999999996553222223232222  48999999999999999998       4579


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      |||.-|--....             .-   ++           -++|++++-.+++.+    +..+.-++|.+|+..+.+
T Consensus       134 VINLIGrd~eTk-------------nf---~f-----------~Dvn~~~aerlAric----ke~GVerfIhvS~Lganv  182 (391)
T KOG2865|consen  134 VINLIGRDYETK-------------NF---SF-----------EDVNVHIAERLARIC----KEAGVERFIHVSCLGANV  182 (391)
T ss_pred             EEEeeccccccC-------------Cc---cc-----------ccccchHHHHHHHHH----HhhChhheeehhhccccc
Confidence            999998743211             11   11           568999998888887    666777899999987664

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.65  E-value=3.2e-07  Score=65.89  Aligned_cols=79  Identities=25%  Similarity=0.239  Sum_probs=62.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.||++++|+.+++.|+++|++|++++|+.++.++..+.+.+..+  .....+|..+.+++.+.+.       +.|+
T Consensus        30 ~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~-------~~di  100 (194)
T cd01078          30 TAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG--EGVGAVETSDDAARAAAIK-------GADV  100 (194)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC--CcEEEeeCCCHHHHHHHHh-------cCCE
Confidence            479999999999999999999999999999998777777766654332  3455678888888776665       6798


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      +|++....
T Consensus       101 Vi~at~~g  108 (194)
T cd01078         101 VFAAGAAG  108 (194)
T ss_pred             EEECCCCC
Confidence            88876543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.63  E-value=1.1e-07  Score=70.74  Aligned_cols=119  Identities=21%  Similarity=0.205  Sum_probs=78.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+|.||..+|..|..+|+.|++++.....-.+....+-..+  ++..+..|+..+     ++.       .+|.
T Consensus        29 rI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~--~fel~~hdv~~p-----l~~-------evD~   94 (350)
T KOG1429|consen   29 RILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHP--NFELIRHDVVEP-----LLK-------EVDQ   94 (350)
T ss_pred             EEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCc--ceeEEEeechhH-----HHH-------Hhhh
Confidence            48999999999999999999999999999875544334333333222  366666776443     443       5789


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ++|.|+..++..=.              .++.         +.+.+|.+++.++...+-    +-+ .|+++.|+ +-++
T Consensus        95 IyhLAapasp~~y~--------------~npv---------ktIktN~igtln~lglak----rv~-aR~l~aST-seVY  145 (350)
T KOG1429|consen   95 IYHLAAPASPPHYK--------------YNPV---------KTIKTNVIGTLNMLGLAK----RVG-ARFLLAST-SEVY  145 (350)
T ss_pred             hhhhccCCCCcccc--------------cCcc---------ceeeecchhhHHHHHHHH----HhC-ceEEEeec-cccc
Confidence            99999887654200              0111         237899999999988873    322 56555554 4444


Q ss_pred             cC
Q 035504          161 KN  162 (174)
Q Consensus       161 ~~  162 (174)
                      |.
T Consensus       146 gd  147 (350)
T KOG1429|consen  146 GD  147 (350)
T ss_pred             CC
Confidence            43

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.53  E-value=3e-06  Score=63.45  Aligned_cols=73  Identities=23%  Similarity=0.246  Sum_probs=63.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .+|||||++.+|.+++++|.++|++|....|+.+......        ..+.+...|+.+...+...+.       +++.
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--------~~v~~~~~d~~~~~~l~~a~~-------G~~~   66 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--------GGVEVVLGDLRDPKSLVAGAK-------GVDG   66 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--------CCcEEEEeccCCHhHHHHHhc-------cccE
Confidence            4899999999999999999999999999999977654443        248899999999999988877       8899


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      +++..+..
T Consensus        67 ~~~i~~~~   74 (275)
T COG0702          67 VLLISGLL   74 (275)
T ss_pred             EEEEeccc
Confidence            99888764

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.53  E-value=1.2e-06  Score=65.15  Aligned_cols=37  Identities=22%  Similarity=0.318  Sum_probs=33.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE   38 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   38 (174)
                      ++||||+|-||.+++.+|.+.|+.|.++.|+.+....
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~   37 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ   37 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhh
Confidence            5899999999999999999999999999999775433

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.52  E-value=6.2e-07  Score=70.98  Aligned_cols=76  Identities=33%  Similarity=0.426  Sum_probs=59.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCC-C-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            2 AVVTGANKGIGYETVRQLASNG-I-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g-~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      |+|.|+ |.+|..+++.|++++ . +|++.+|+.+.+++..+++   ...++...++|+.|.+++.++++       +.|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~l~~~~~-------~~d   69 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---LGDRVEAVQVDVNDPESLAELLR-------GCD   69 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----TTTTEEEEE--TTTHHHHHHHHT-------TSS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---cccceeEEEEecCCHHHHHHHHh-------cCC
Confidence            689999 999999999999987 4 8999999988877776654   33569999999999999888877       679


Q ss_pred             EEEeccccc
Q 035504           80 ILVNNAAIF   88 (174)
Q Consensus        80 ~li~~ag~~   88 (174)
                      ++||++|..
T Consensus        70 vVin~~gp~   78 (386)
T PF03435_consen   70 VVINCAGPF   78 (386)
T ss_dssp             EEEE-SSGG
T ss_pred             EEEECCccc
Confidence            999999874

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.49  E-value=6.1e-07  Score=70.85  Aligned_cols=76  Identities=14%  Similarity=0.156  Sum_probs=57.2

Q ss_pred             CEEEecC---------------CCc-hhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhH
Q 035504            1 YAVVTGA---------------NKG-IGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATI   64 (174)
Q Consensus         1 ~~litGa---------------~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i   64 (174)
                      ++|||||               |+| +|.++|++|..+|++|+++++.....          .+.  ....+|+++.+++
T Consensus       187 ~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~~--~~~~~~v~~~~~~  254 (390)
T TIGR00521       187 RVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TPP--GVKSIKVSTAEEM  254 (390)
T ss_pred             eEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CCC--CcEEEEeccHHHH
Confidence            4799999               667 99999999999999999988654320          111  2256899998888


Q ss_pred             -HHHHHHHHhhcCCccEEEecccccCcc
Q 035504           65 -HSLADFVRSQFGKLDILVNNAAIFGVS   91 (174)
Q Consensus        65 -~~~~~~~~~~~g~id~li~~ag~~~~~   91 (174)
                       ++++++   .++++|++|+|||+....
T Consensus       255 ~~~~~~~---~~~~~D~~i~~Aavsd~~  279 (390)
T TIGR00521       255 LEAALNE---LAKDFDIFISAAAVADFK  279 (390)
T ss_pred             HHHHHHh---hcccCCEEEEcccccccc
Confidence             555544   357899999999997654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.46  E-value=1.2e-06  Score=68.67  Aligned_cols=76  Identities=29%  Similarity=0.410  Sum_probs=63.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      .+||.|+ |++|+.+|.-|+++| .+|.+.+|+.+.+.+......    .++...++|+.|.+.+.++++       ..|
T Consensus         3 ~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~----~~v~~~~vD~~d~~al~~li~-------~~d   70 (389)
T COG1748           3 KILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG----GKVEALQVDAADVDALVALIK-------DFD   70 (389)
T ss_pred             cEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc----ccceeEEecccChHHHHHHHh-------cCC
Confidence            3688888 999999999999999 899999999876666544322    369999999999999998887       559


Q ss_pred             EEEeccccc
Q 035504           80 ILVNNAAIF   88 (174)
Q Consensus        80 ~li~~ag~~   88 (174)
                      ++||++...
T Consensus        71 ~VIn~~p~~   79 (389)
T COG1748          71 LVINAAPPF   79 (389)
T ss_pred             EEEEeCCch
Confidence            999999764

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.39  E-value=8.5e-07  Score=65.03  Aligned_cols=143  Identities=19%  Similarity=0.078  Sum_probs=95.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH-HHHHH----hhcCCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE-AVEKL----KHSGFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~l----~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      ++||||-++--|..++..|+.+|++|..+-|+...-.. -.+.|    ....+........|++|...+.++++.+    
T Consensus        30 vALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i----  105 (376)
T KOG1372|consen   30 VALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI----  105 (376)
T ss_pred             EEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc----
Confidence            47999999999999999999999999988886543221 12222    2223345778889999999999999988    


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS  155 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS  155 (174)
                       .++-++|.|+..+....+                       +-.+..-++...|+++|..++-..=...  +.-.+..|
T Consensus       106 -kPtEiYnLaAQSHVkvSF-----------------------dlpeYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAs  159 (376)
T KOG1372|consen  106 -KPTEVYNLAAQSHVKVSF-----------------------DLPEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQAS  159 (376)
T ss_pred             -CchhhhhhhhhcceEEEe-----------------------ecccceeeccchhhhhHHHHHHhcCccc--ceeEEecc
Confidence             788899999887643211                       1111124677788998887773321111  23344555


Q ss_pred             CCCccc------------CCCCcceeeecc
Q 035504          156 NMGKLK------------NTWQGAICYLTF  173 (174)
Q Consensus       156 ~~~~~~------------~~~~~~y~~~k~  173 (174)
                      .+-..+            .-..++|+++|+
T Consensus       160 tSElyGkv~e~PQsE~TPFyPRSPYa~aKm  189 (376)
T KOG1372|consen  160 TSELYGKVQEIPQSETTPFYPRSPYAAAKM  189 (376)
T ss_pred             cHhhcccccCCCcccCCCCCCCChhHHhhh
Confidence            443332            224578888876

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.30  E-value=1.4e-05  Score=56.10  Aligned_cols=72  Identities=17%  Similarity=0.156  Sum_probs=60.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .+-|.||||-.|..++++..++|++|..+.|++......         ..+..++.|+.|.+++...+.       +.|+
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---------~~~~i~q~Difd~~~~a~~l~-------g~Da   65 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---------QGVTILQKDIFDLTSLASDLA-------GHDA   65 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---------ccceeecccccChhhhHhhhc-------CCce
Confidence            367999999999999999999999999999997653221         247889999999998866665       8999


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      ||..-|..
T Consensus        66 VIsA~~~~   73 (211)
T COG2910          66 VISAFGAG   73 (211)
T ss_pred             EEEeccCC
Confidence            99988764

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.29  E-value=3.8e-06  Score=64.51  Aligned_cols=83  Identities=24%  Similarity=0.326  Sum_probs=70.8

Q ss_pred             EEEecCCCchhHHHHHHHHH----CCCeEEEEeeChhHHHHHHHHHhhcCCC---ceeEEEeecCChhhHHHHHHHHHhh
Q 035504            2 AVVTGANKGIGYETVRQLAS----NGIIVVLTARDEKRGLEAVEKLKHSGFD---SVIFHQLDVADPATIHSLADFVRSQ   74 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~Dv~~~~~i~~~~~~~~~~   74 (174)
                      ++|-||||..|..++.++.+    .|..+.+.+|+++++++.++.+.+..+.   ....+.+|.+|++++.++..     
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak-----   82 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK-----   82 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh-----
Confidence            68999999999999999999    7889999999999999999888766533   23388899999999999998     


Q ss_pred             cCCccEEEecccccCcc
Q 035504           75 FGKLDILVNNAAIFGVS   91 (174)
Q Consensus        75 ~g~id~li~~ag~~~~~   91 (174)
                        +..+++||+|.....
T Consensus        83 --~~~vivN~vGPyR~h   97 (423)
T KOG2733|consen   83 --QARVIVNCVGPYRFH   97 (423)
T ss_pred             --hhEEEEeccccceec
Confidence              446999999986544

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.28  E-value=4e-06  Score=72.92  Aligned_cols=145  Identities=21%  Similarity=0.236  Sum_probs=104.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeChhHH---HHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDEKRG---LEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      .++|+||-+|.|++++..|.++|++ +++++|+--+.   ....+..+..+- .+.+-..|++..+..+.++++. ++.+
T Consensus      1770 sYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GV-qV~vsT~nitt~~ga~~Li~~s-~kl~ 1847 (2376)
T KOG1202|consen 1770 SYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGV-QVQVSTSNITTAEGARGLIEES-NKLG 1847 (2376)
T ss_pred             eEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCe-EEEEecccchhhhhHHHHHHHh-hhcc
Confidence            3789999999999999999999986 88999864321   123344455442 2555567888888888888755 4678


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHh---hhhhccCCCCCeEEEE
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEV---LIPLLQLSDLPRIVNV  153 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~---~~~~m~~~~~g~iv~i  153 (174)
                      ++..++|.|.+....        .+           ++-+++.|+..-+..+.++.+|-+.   ..|.+     .-+|.+
T Consensus      1848 ~vGGiFnLA~VLRD~--------Li-----------EnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L-----dyFv~F 1903 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDG--------LI-----------ENQTPKNFKDVAKPKYSGTINLDRVSREICPEL-----DYFVVF 1903 (2376)
T ss_pred             cccchhhHHHHHHhh--------hh-----------cccChhHHHhhhccceeeeeehhhhhhhhCccc-----ceEEEE
Confidence            899999999886432        12           3345566666678888888877544   34433     578889


Q ss_pred             ecCCCcccCCCCcceeee
Q 035504          154 SSNMGKLKNTWQGAICYL  171 (174)
Q Consensus       154 sS~~~~~~~~~~~~y~~~  171 (174)
                      ||++--.++.++..|.-+
T Consensus      1904 SSvscGRGN~GQtNYG~a 1921 (2376)
T KOG1202|consen 1904 SSVSCGRGNAGQTNYGLA 1921 (2376)
T ss_pred             EeecccCCCCcccccchh
Confidence            999888888998888754

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.26  E-value=1.2e-05  Score=63.43  Aligned_cols=130  Identities=19%  Similarity=0.155  Sum_probs=84.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+||+|++|+-+++.|.++|+.|...-|+.+...+... +..... ....+..|...+.++..-+.+.  .--...+
T Consensus        81 ~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~-~~~~v~~~~~~~~d~~~~~~~~--~~~~~~~  156 (411)
T KOG1203|consen   81 TVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDL-GLQNVEADVVTAIDILKKLVEA--VPKGVVI  156 (411)
T ss_pred             eEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-cccccc-ccceeeeccccccchhhhhhhh--cccccee
Confidence            48999999999999999999999999999999887666654 111111 2455555655555544322222  1112446


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ++.++|.-+-               +++....           .++...|..++++++    +..+-.+++++||+.+..
T Consensus       157 v~~~~ggrp~---------------~ed~~~p-----------~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~~  206 (411)
T KOG1203|consen  157 VIKGAGGRPE---------------EEDIVTP-----------EKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGTK  206 (411)
T ss_pred             EEecccCCCC---------------cccCCCc-----------ceecHHHHHHHHHHH----HHhCCceEEEEEeecCcc
Confidence            6666654210               0001111           457778888999888    666778999999998877


Q ss_pred             cCCC
Q 035504          161 KNTW  164 (174)
Q Consensus       161 ~~~~  164 (174)
                      .+..
T Consensus       207 ~~~~  210 (411)
T KOG1203|consen  207 FNQP  210 (411)
T ss_pred             cCCC
Confidence            5443

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.21  E-value=9.5e-06  Score=62.60  Aligned_cols=116  Identities=19%  Similarity=0.091  Sum_probs=73.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++.|+|++|.+|..++..|+.++  .+++++++..  +...+.++.....   .....+.+|..++.+.++       +.
T Consensus        10 KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~---~~~v~~~td~~~~~~~l~-------ga   77 (321)
T PTZ00325         10 KVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT---PAKVTGYADGELWEKALR-------GA   77 (321)
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc---CceEEEecCCCchHHHhC-------CC
Confidence            47899999999999999999665  5799999832  2222223332111   223445656554433333       89


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |++|+++|....+              .+.+           ...+..|+.....+.+++    ++.+..++|+++|..
T Consensus        78 DvVVitaG~~~~~--------------~~tR-----------~dll~~N~~i~~~i~~~i----~~~~~~~iviv~SNP  127 (321)
T PTZ00325         78 DLVLICAGVPRKP--------------GMTR-----------DDLFNTNAPIVRDLVAAV----ASSAPKAIVGIVSNP  127 (321)
T ss_pred             CEEEECCCCCCCC--------------CCCH-----------HHHHHHHHHHHHHHHHHH----HHHCCCeEEEEecCc
Confidence            9999999973211              0112           233888887766666665    666667888888743

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.18  E-value=2.5e-05  Score=62.63  Aligned_cols=123  Identities=23%  Similarity=0.311  Sum_probs=82.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC---CeEEEEeeChh--HHH---------HHHHHHhhcCC---CceeEEEeecCChh-
Q 035504            1 YAVVTGANKGIGYETVRQLASNG---IIVVLTARDEK--RGL---------EAVEKLKHSGF---DSVIFHQLDVADPA-   62 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g---~~v~~~~r~~~--~~~---------~~~~~l~~~~~---~~~~~~~~Dv~~~~-   62 (174)
                      +++||||+|++|.-++..|++.-   -++++.-|...  ..+         ++-+.+.+..|   +++..+..|+++++ 
T Consensus        14 ~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~L   93 (467)
T KOG1221|consen   14 TIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDL   93 (467)
T ss_pred             eEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCccc
Confidence            58999999999999999999864   25777777421  111         12233333333   36788888987654 


Q ss_pred             -----hHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHh
Q 035504           63 -----TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEV  137 (174)
Q Consensus        63 -----~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  137 (174)
                           +.+.+.       ..+|++||+|+...+.                          +.++..+.+|..|+.++.+.
T Consensus        94 Gis~~D~~~l~-------~eV~ivih~AAtvrFd--------------------------e~l~~al~iNt~Gt~~~l~l  140 (467)
T KOG1221|consen   94 GISESDLRTLA-------DEVNIVIHSAATVRFD--------------------------EPLDVALGINTRGTRNVLQL  140 (467)
T ss_pred             CCChHHHHHHH-------hcCCEEEEeeeeeccc--------------------------hhhhhhhhhhhHhHHHHHHH
Confidence                 233233       3899999999986542                          22334488999999999988


Q ss_pred             hhhhccCCCCCeEEEEecCCCc
Q 035504          138 LIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus       138 ~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +....   +...++.+|.....
T Consensus       141 ak~~~---~l~~~vhVSTAy~n  159 (467)
T KOG1221|consen  141 AKEMV---KLKALVHVSTAYSN  159 (467)
T ss_pred             HHHhh---hhheEEEeehhhee
Confidence            75433   22467888876554

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.17  E-value=2.1e-05  Score=53.25  Aligned_cols=73  Identities=19%  Similarity=0.223  Sum_probs=53.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ ||.|+++++.|.+.|++ |.++.|+.+++++..+.+..   ..+.+.  ++.+   +...+.       ..|
T Consensus        14 ~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~---~~~~~~--~~~~---~~~~~~-------~~D   77 (135)
T PF01488_consen   14 RVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG---VNIEAI--PLED---LEEALQ-------EAD   77 (135)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG---CSEEEE--EGGG---HCHHHH-------TES
T ss_pred             EEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc---ccccee--eHHH---HHHHHh-------hCC
Confidence            3788887 99999999999999987 99999999888888887721   223333  3323   333333       789


Q ss_pred             EEEecccccC
Q 035504           80 ILVNNAAIFG   89 (174)
Q Consensus        80 ~li~~ag~~~   89 (174)
                      ++|++.+...
T Consensus        78 ivI~aT~~~~   87 (135)
T PF01488_consen   78 IVINATPSGM   87 (135)
T ss_dssp             EEEE-SSTTS
T ss_pred             eEEEecCCCC
Confidence            9999998753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.16  E-value=1.4e-05  Score=61.88  Aligned_cols=77  Identities=19%  Similarity=0.182  Sum_probs=46.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-------CeEEEEeeChhH--HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-------IIVVLTARDEKR--GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-------~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      +++||||+|.+|..++..|+..+       .++++++++...  +.....++...    ......|+....+..+     
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~----~~~~~~~~~~~~~~~~-----   74 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC----AFPLLKSVVATTDPEE-----   74 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc----cccccCCceecCCHHH-----
Confidence            37999999999999999999854       489999986431  11111111100    0011123333333333     


Q ss_pred             HhhcCCccEEEeccccc
Q 035504           72 RSQFGKLDILVNNAAIF   88 (174)
Q Consensus        72 ~~~~g~id~li~~ag~~   88 (174)
                        .+.+.|++||+||..
T Consensus        75 --~l~~aDiVI~tAG~~   89 (325)
T cd01336          75 --AFKDVDVAILVGAMP   89 (325)
T ss_pred             --HhCCCCEEEEeCCcC
Confidence              334899999999984

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.08  E-value=0.00012  Score=60.31  Aligned_cols=74  Identities=19%  Similarity=0.226  Sum_probs=58.2

Q ss_pred             CEEEecCC-CchhHHHHHHHHHCCCeEEEEeeCh-hHHHHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhh
Q 035504            1 YAVVTGAN-KGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQ   74 (174)
Q Consensus         1 ~~litGa~-~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   74 (174)
                      ++|||||+ +.||.+++.+|++.|++|+++-.+- ++..+-.+.|-..   ++..+.++..+.++..+++++++.|.+.
T Consensus       398 valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~e  476 (866)
T COG4982         398 VALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDE  476 (866)
T ss_pred             eEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccc
Confidence            57999998 7899999999999999999885543 3334445555333   3345778899999999999999999874

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.06  E-value=1.9e-05  Score=63.71  Aligned_cols=72  Identities=22%  Similarity=0.257  Sum_probs=53.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|+|+++ +|.++|+.|+++|++|.+++++. +...+..+++.+.   ++.++..|..+.            ..+++|
T Consensus         7 ~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~------------~~~~~d   70 (450)
T PRK14106          7 KVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL---GIELVLGEYPEE------------FLEGVD   70 (450)
T ss_pred             EEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---CCEEEeCCcchh------------HhhcCC
Confidence            478999877 99999999999999999999875 3344444555433   256777777651            234799


Q ss_pred             EEEeccccc
Q 035504           80 ILVNNAAIF   88 (174)
Q Consensus        80 ~li~~ag~~   88 (174)
                      ++|+++|..
T Consensus        71 ~vv~~~g~~   79 (450)
T PRK14106         71 LVVVSPGVP   79 (450)
T ss_pred             EEEECCCCC
Confidence            999999873

>PLN00106 malate dehydrogenase

Probab=98.05  E-value=2.6e-05  Score=60.27  Aligned_cols=117  Identities=16%  Similarity=0.110  Sum_probs=72.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++.|+|++|.+|..++..|+.++.  ++++++.++.  .....+|.....   .....++++.+++.+.+.       +.
T Consensus        20 KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~~~---~~~i~~~~~~~d~~~~l~-------~a   87 (323)
T PLN00106         20 KVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHINT---PAQVRGFLGDDQLGDALK-------GA   87 (323)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhCCc---CceEEEEeCCCCHHHHcC-------CC
Confidence            478999999999999999997764  7999998762  221223322111   112335444444444443       89


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|+.||....+.              ..           +...+..|+.....+.+.+    ++.....+++++|-..
T Consensus        88 DiVVitAG~~~~~g--------------~~-----------R~dll~~N~~i~~~i~~~i----~~~~p~aivivvSNPv  138 (323)
T PLN00106         88 DLVIIPAGVPRKPG--------------MT-----------RDDLFNINAGIVKTLCEAV----AKHCPNALVNIISNPV  138 (323)
T ss_pred             CEEEEeCCCCCCCC--------------CC-----------HHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEeCCCc
Confidence            99999999843210              11           2334788887766666665    5555566666666543

>PRK09620 hypothetical protein; Provisional

Probab=97.91  E-value=1.3e-05  Score=59.03  Aligned_cols=82  Identities=15%  Similarity=0.062  Sum_probs=48.5

Q ss_pred             CEEEecCC----------------CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhH
Q 035504            1 YAVVTGAN----------------KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATI   64 (174)
Q Consensus         1 ~~litGa~----------------~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i   64 (174)
                      .+|||+|.                |.+|.++|++|+++|++|+++++.......   .+.  .......+..    ..++
T Consensus         5 ~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~--~~~~~~~V~s----~~d~   75 (229)
T PRK09620          5 KVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN--NQLELHPFEG----IIDL   75 (229)
T ss_pred             EEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC--CceeEEEEec----HHHH
Confidence            37899886                999999999999999999988753211000   000  0011222333    2223


Q ss_pred             HHHHHHHHhhcCCccEEEecccccCccC
Q 035504           65 HSLADFVRSQFGKLDILVNNAAIFGVSV   92 (174)
Q Consensus        65 ~~~~~~~~~~~g~id~li~~ag~~~~~~   92 (174)
                      ...+.++.+. .++|++||+|++....+
T Consensus        76 ~~~l~~~~~~-~~~D~VIH~AAvsD~~~  102 (229)
T PRK09620         76 QDKMKSIITH-EKVDAVIMAAAGSDWVV  102 (229)
T ss_pred             HHHHHHHhcc-cCCCEEEECccccceec
Confidence            3333333221 25899999999965443

>cd00704 MDH Malate dehydrogenase

Probab=97.84  E-value=0.00014  Score=56.35  Aligned_cols=75  Identities=20%  Similarity=0.231  Sum_probs=48.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-------eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChh--hHH--HHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-------IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA--TIH--SLAD   69 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~--~i~--~~~~   69 (174)
                      ++.|+||+|.+|..++..|+..|.       ++++++++...             +.......|+.|..  ...  .+..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-------------~~~~g~~~Dl~d~~~~~~~~~~i~~   68 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-------------KALEGVVMELQDCAFPLLKGVVITT   68 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-------------CccceeeeehhhhcccccCCcEEec
Confidence            478999999999999999998652       49999887521             01333445554441  000  0001


Q ss_pred             HHHhhcCCccEEEeccccc
Q 035504           70 FVRSQFGKLDILVNNAAIF   88 (174)
Q Consensus        70 ~~~~~~g~id~li~~ag~~   88 (174)
                      ...+.+.+.|++|+.||..
T Consensus        69 ~~~~~~~~aDiVVitAG~~   87 (323)
T cd00704          69 DPEEAFKDVDVAILVGAFP   87 (323)
T ss_pred             ChHHHhCCCCEEEEeCCCC
Confidence            2234445899999999974

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.83  E-value=9.7e-05  Score=57.38  Aligned_cols=70  Identities=26%  Similarity=0.285  Sum_probs=49.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-C-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-G-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||+|.||..+|++|+++ | .++++++|+...+.+..+++..          .|+.   ++.       +.....
T Consensus       157 ~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~----------~~i~---~l~-------~~l~~a  216 (340)
T PRK14982        157 TVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG----------GKIL---SLE-------EALPEA  216 (340)
T ss_pred             EEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc----------ccHH---hHH-------HHHccC
Confidence            4899999999999999999864 5 5899999987766665554421          1221   122       233478


Q ss_pred             cEEEecccccCc
Q 035504           79 DILVNNAAIFGV   90 (174)
Q Consensus        79 d~li~~ag~~~~   90 (174)
                      |++|++++...+
T Consensus       217 DiVv~~ts~~~~  228 (340)
T PRK14982        217 DIVVWVASMPKG  228 (340)
T ss_pred             CEEEECCcCCcC
Confidence            999999987543

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=97.80  E-value=2.4e-05  Score=58.56  Aligned_cols=123  Identities=20%  Similarity=0.193  Sum_probs=82.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeC-hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      .++||||.+.||...+..+...-  ++.+.++.- --+..+.+++....  .+.+++..|+.++..+..++..     .+
T Consensus         8 ~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~--p~ykfv~~di~~~~~~~~~~~~-----~~   80 (331)
T KOG0747|consen    8 NVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNS--PNYKFVEGDIADADLVLYLFET-----EE   80 (331)
T ss_pred             eEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccC--CCceEeeccccchHHHHhhhcc-----Cc
Confidence            37999999999999999999873  556655441 11113333333332  2589999999998887766642     38


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      +|.+||.|+..+..-..              ..++         ...+.|+.++..|...+.-.-   +-.++|++|+-
T Consensus        81 id~vihfaa~t~vd~s~--------------~~~~---------~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTd  133 (331)
T KOG0747|consen   81 IDTVIHFAAQTHVDRSF--------------GDSF---------EFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTD  133 (331)
T ss_pred             hhhhhhhHhhhhhhhhc--------------CchH---------HHhcCCchhhhhHHHHHHhcc---CeeEEEEeccc
Confidence            99999999886542100              0111         226899999999998874332   33579999983

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.72  E-value=0.00043  Score=53.68  Aligned_cols=75  Identities=21%  Similarity=0.168  Sum_probs=49.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-------eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHH--HH--H
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-------IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHS--LA--D   69 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~--~~--~   69 (174)
                      .+.|+|++|.+|..++..|+..+.       ++++++++++.             ........|+.|......  ..  .
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~-------------~~a~g~~~Dl~d~~~~~~~~~~~~~   67 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM-------------KVLEGVVMELMDCAFPLLDGVVPTH   67 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc-------------cccceeEeehhcccchhcCceeccC
Confidence            478999999999999999998653       59999886432             113344555555441100  00  0


Q ss_pred             HHHhhcCCccEEEeccccc
Q 035504           70 FVRSQFGKLDILVNNAAIF   88 (174)
Q Consensus        70 ~~~~~~g~id~li~~ag~~   88 (174)
                      ...+.+...|++|+.||..
T Consensus        68 ~~~~~~~~aDiVVitAG~~   86 (324)
T TIGR01758        68 DPAVAFTDVDVAILVGAFP   86 (324)
T ss_pred             ChHHHhCCCCEEEEcCCCC
Confidence            1234455899999999973

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.71  E-value=0.00087  Score=46.44  Aligned_cols=142  Identities=14%  Similarity=0.044  Sum_probs=90.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC--Cc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG--KL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g--~i   78 (174)
                      .++|-|+-+.+|.+.+..|-.+++-|.-++-.+.+..           +.-+.+..|-+=-++-+.+++++.+..+  ++
T Consensus         5 rVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekv   73 (236)
T KOG4022|consen    5 RVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKV   73 (236)
T ss_pred             eEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------cceEEecCCcchhHHHHHHHHHHHHhhccccc
Confidence            4789999999999999999999998887776543211           1123344444444555666777766553  79


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |.+++.||......   .        +..++-+-       .+-+++-.+.......+.+..+++  .+|-+-..+...+
T Consensus        74 Dav~CVAGGWAGGn---A--------ksKdl~KN-------aDLMwKQSvwtSaIsa~lAt~HLK--~GGLL~LtGAkaA  133 (236)
T KOG4022|consen   74 DAVFCVAGGWAGGN---A--------KSKDLVKN-------ADLMWKQSVWTSAISAKLATTHLK--PGGLLQLTGAKAA  133 (236)
T ss_pred             ceEEEeeccccCCC---c--------chhhhhhc-------hhhHHHHHHHHHHHHHHHHHhccC--CCceeeecccccc
Confidence            99999999754321   1        11111110       112344455555555555555554  2367777777788


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      .-+.|+...|.++|.
T Consensus       134 l~gTPgMIGYGMAKa  148 (236)
T KOG4022|consen  134 LGGTPGMIGYGMAKA  148 (236)
T ss_pred             cCCCCcccchhHHHH
Confidence            889999999998874

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.70  E-value=0.00083  Score=45.76  Aligned_cols=74  Identities=23%  Similarity=0.248  Sum_probs=53.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      .+.|.|++|.+|..++..|...+  .++++++++++.++....++...   .+.+.....   .+++++.          
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~~----------   68 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEALK----------   68 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGGT----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccccc----------
Confidence            37899999999999999999986  47999999977666665555432   212222222   4444443          


Q ss_pred             CCccEEEeccccc
Q 035504           76 GKLDILVNNAAIF   88 (174)
Q Consensus        76 g~id~li~~ag~~   88 (174)
                       ..|++|..+|..
T Consensus        69 -~aDivvitag~~   80 (141)
T PF00056_consen   69 -DADIVVITAGVP   80 (141)
T ss_dssp             -TESEEEETTSTS
T ss_pred             -cccEEEEecccc
Confidence             789999999974

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.67  E-value=0.00091  Score=51.35  Aligned_cols=77  Identities=21%  Similarity=0.304  Sum_probs=52.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+++++|.++++.+...|++++++.++.+..+.. ..   .+..    ...|..+.+..+.+.....  .+++|.
T Consensus       169 ~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~~~~----~~~~~~~~~~~~~~~~~~~--~~~~d~  238 (342)
T cd08266         169 TVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KE---LGAD----YVIDYRKEDFVREVRELTG--KRGVDV  238 (342)
T ss_pred             EEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCC----eEEecCChHHHHHHHHHhC--CCCCcE
Confidence            378999999999999999999999999998876543322 22   2211    1235555555554443332  236999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +++++|.
T Consensus       239 ~i~~~g~  245 (342)
T cd08266         239 VVEHVGA  245 (342)
T ss_pred             EEECCcH
Confidence            9999874

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.67  E-value=0.00085  Score=52.06  Aligned_cols=78  Identities=19%  Similarity=0.214  Sum_probs=49.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+++++|..++..+...|++|+.+.++.++.+...+.+   +.+.    ..|..+.++..+.+.+...  +++|+
T Consensus       154 ~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~~----vi~~~~~~~~~~~i~~~~~--~gvd~  224 (338)
T cd08295         154 TVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFDD----AFNYKEEPDLDAALKRYFP--NGIDI  224 (338)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCce----eEEcCCcccHHHHHHHhCC--CCcEE
Confidence            4799999999999999888788999988888765433332213   2121    1232233344444443322  47999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      ++.+.|.
T Consensus       225 v~d~~g~  231 (338)
T cd08295         225 YFDNVGG  231 (338)
T ss_pred             EEECCCH
Confidence            9998874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK05086 malate dehydrogenase; Provisional

Probab=97.64  E-value=0.00016  Score=55.82  Aligned_cols=77  Identities=17%  Similarity=0.067  Sum_probs=44.7

Q ss_pred             CEEEecCCCchhHHHHHHHHH-C--CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLAS-N--GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~-~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      .++|.||+|++|.+++..|.. .  +..+++.++++. .....-++... .. ...+..  .+.+++.+.+       .+
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~-~~-~~~i~~--~~~~d~~~~l-------~~   69 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI-PT-AVKIKG--FSGEDPTPAL-------EG   69 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC-CC-CceEEE--eCCCCHHHHc-------CC
Confidence            378999999999999998855 2  457888887643 21111222211 11 111222  1122322222       37


Q ss_pred             ccEEEecccccC
Q 035504           78 LDILVNNAAIFG   89 (174)
Q Consensus        78 id~li~~ag~~~   89 (174)
                      .|++|.++|..+
T Consensus        70 ~DiVIitaG~~~   81 (312)
T PRK05086         70 ADVVLISAGVAR   81 (312)
T ss_pred             CCEEEEcCCCCC
Confidence            999999999854

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.63  E-value=0.0011  Score=51.51  Aligned_cols=75  Identities=20%  Similarity=0.322  Sum_probs=48.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC--Cc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG--KL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g--~i   78 (174)
                      ++||+||++|+|...+...-..|++++++..+.++.+ .+   .+.+.+.    ..|..+++    +.+++++..+  ++
T Consensus       145 ~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~---~~lGAd~----vi~y~~~~----~~~~v~~~t~g~gv  212 (326)
T COG0604         145 TVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LL---KELGADH----VINYREED----FVEQVRELTGGKGV  212 (326)
T ss_pred             EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HH---HhcCCCE----EEcCCccc----HHHHHHHHcCCCCc
Confidence            5899999999999999988888977666665544333 33   3334331    22233333    3334443332  69


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |+++...|.
T Consensus       213 Dvv~D~vG~  221 (326)
T COG0604         213 DVVLDTVGG  221 (326)
T ss_pred             eEEEECCCH
Confidence            999999986

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.63  E-value=0.00035  Score=48.00  Aligned_cols=70  Identities=19%  Similarity=0.323  Sum_probs=49.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|+|+ +++|.++++.|.+.| .+|.+++|+.+..++..+++....      ...+..+.++.          ....|+
T Consensus        22 i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~~----------~~~~Dv   84 (155)
T cd01065          22 VLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG------IAIAYLDLEEL----------LAEADL   84 (155)
T ss_pred             EEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc------cceeecchhhc----------cccCCE
Confidence            688998 899999999999996 789999998777666665553221      12233333221          247899


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      +|++....
T Consensus        85 vi~~~~~~   92 (155)
T cd01065          85 IINTTPVG   92 (155)
T ss_pred             EEeCcCCC
Confidence            99999764

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.60  E-value=0.0011  Score=51.92  Aligned_cols=78  Identities=19%  Similarity=0.200  Sum_probs=49.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.|+++++|...+..+...|++|+.+.++.++.+...+++   +.+.    ..|..+.+++.+.+.+...  +++|+
T Consensus       161 ~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~----vi~~~~~~~~~~~i~~~~~--~gvD~  231 (348)
T PLN03154        161 SVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDE----AFNYKEEPDLDAALKRYFP--EGIDI  231 (348)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCE----EEECCCcccHHHHHHHHCC--CCcEE
Confidence            4799999999999998887788999988887765433322233   2221    1233333344444443321  37999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      ++.+.|.
T Consensus       232 v~d~vG~  238 (348)
T PLN03154        232 YFDNVGG  238 (348)
T ss_pred             EEECCCH
Confidence            9999874

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.58  E-value=0.00052  Score=51.87  Aligned_cols=71  Identities=17%  Similarity=0.337  Sum_probs=50.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+ +|+|++++..|++.|++|.+++|+.++.++..+++...+ . ......|     +.         .....|+
T Consensus       119 ~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~-~-~~~~~~~-----~~---------~~~~~Di  181 (270)
T TIGR00507       119 RVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG-E-IQAFSMD-----EL---------PLHRVDL  181 (270)
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC-c-eEEechh-----hh---------cccCccE
Confidence            3789998 699999999999999999999999877777776665432 1 2221111     10         1236899


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      +||+.+..
T Consensus       182 vInatp~g  189 (270)
T TIGR00507       182 IINATSAG  189 (270)
T ss_pred             EEECCCCC
Confidence            99999874

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.54  E-value=0.0015  Score=50.36  Aligned_cols=73  Identities=22%  Similarity=0.199  Sum_probs=50.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcC---CCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSG---FDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      ++.|.|+ |++|..++..|+..|  .++++++++.+.++....++....   +.......   .+.+++           
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~l-----------   66 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSDC-----------   66 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHHh-----------
Confidence            3678886 899999999999999  579999998877666666664321   12222221   222221           


Q ss_pred             CCccEEEeccccc
Q 035504           76 GKLDILVNNAAIF   88 (174)
Q Consensus        76 g~id~li~~ag~~   88 (174)
                      ...|++|+++|..
T Consensus        67 ~~aDIVIitag~~   79 (306)
T cd05291          67 KDADIVVITAGAP   79 (306)
T ss_pred             CCCCEEEEccCCC
Confidence            3789999999873

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.54  E-value=0.00036  Score=52.94  Aligned_cols=71  Identities=17%  Similarity=0.307  Sum_probs=50.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|+|+ ||+|+++++.|...| .+|.+++|+.+++++..+++....  .+.+   ++    +..       +.....|
T Consensus       125 ~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~--~~~~---~~----~~~-------~~~~~~D  187 (278)
T PRK00258        125 RILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG--KAEL---DL----ELQ-------EELADFD  187 (278)
T ss_pred             EEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc--ceee---cc----cch-------hccccCC
Confidence            3789997 899999999999999 689999999887777766664321  0111   11    111       1224689


Q ss_pred             EEEeccccc
Q 035504           80 ILVNNAAIF   88 (174)
Q Consensus        80 ~li~~ag~~   88 (174)
                      ++||+....
T Consensus       188 ivInaTp~g  196 (278)
T PRK00258        188 LIINATSAG  196 (278)
T ss_pred             EEEECCcCC
Confidence            999998764

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.49  E-value=0.00035  Score=53.54  Aligned_cols=76  Identities=18%  Similarity=0.252  Sum_probs=59.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|-||++..|.-+|++|+++|.+..+.+|+..++..+...|..    ....+.+.  +++.++++.+       +.++|
T Consensus         9 ~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~----~~~~~p~~--~p~~~~~~~~-------~~~VV   75 (382)
T COG3268           9 IIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP----EAAVFPLG--VPAALEAMAS-------RTQVV   75 (382)
T ss_pred             EEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc----cccccCCC--CHHHHHHHHh-------cceEE
Confidence            68999999999999999999999999999998877776666532    13333333  3666666666       78899


Q ss_pred             EecccccCc
Q 035504           82 VNNAAIFGV   90 (174)
Q Consensus        82 i~~ag~~~~   90 (174)
                      +||+|....
T Consensus        76 lncvGPyt~   84 (382)
T COG3268          76 LNCVGPYTR   84 (382)
T ss_pred             Eeccccccc
Confidence            999998653

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.47  E-value=0.0015  Score=45.91  Aligned_cols=115  Identities=13%  Similarity=0.014  Sum_probs=72.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            2 AVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      .+|.||++-.|..+.+++++.+  -+|+++.|+......+        ...+.....|.+..++...       .+.+.|
T Consensus        21 ~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at--------~k~v~q~~vDf~Kl~~~a~-------~~qg~d   85 (238)
T KOG4039|consen   21 GFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT--------DKVVAQVEVDFSKLSQLAT-------NEQGPD   85 (238)
T ss_pred             eEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc--------cceeeeEEechHHHHHHHh-------hhcCCc
Confidence            5899999999999999999987  3799999984321111        1235555666655444332       334899


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +++++-|.......            .+.+.              ++.--=.+.++|.+    +..++..|+.+||..+.
T Consensus        86 V~FcaLgTTRgkaG------------adgfy--------------kvDhDyvl~~A~~A----Ke~Gck~fvLvSS~GAd  135 (238)
T KOG4039|consen   86 VLFCALGTTRGKAG------------ADGFY--------------KVDHDYVLQLAQAA----KEKGCKTFVLVSSAGAD  135 (238)
T ss_pred             eEEEeecccccccc------------cCceE--------------eechHHHHHHHHHH----HhCCCeEEEEEeccCCC
Confidence            99999987643221            12222              22211123344555    66777889999998776


Q ss_pred             cc
Q 035504          160 LK  161 (174)
Q Consensus       160 ~~  161 (174)
                      -.
T Consensus       136 ~s  137 (238)
T KOG4039|consen  136 PS  137 (238)
T ss_pred             cc
Confidence            43

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.47  E-value=0.0036  Score=51.34  Aligned_cols=80  Identities=25%  Similarity=0.292  Sum_probs=50.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCCh-------------hhHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP-------------ATIHSL   67 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~-------------~~i~~~   67 (174)
                      +++|.|+ |.+|+..+..+...|++|++++++++..+ .++++   +   ..++..|..+.             +..++.
T Consensus       167 kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle-~aesl---G---A~~v~i~~~e~~~~~~gya~~~s~~~~~~~  238 (509)
T PRK09424        167 KVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAE-QVESM---G---AEFLELDFEEEGGSGDGYAKVMSEEFIKAE  238 (509)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHc---C---CeEEEeccccccccccchhhhcchhHHHHH
Confidence            4788887 89999999999999999999999876533 33333   2   23333333221             112222


Q ss_pred             HHHHHhhcCCccEEEeccccc
Q 035504           68 ADFVRSQFGKLDILVNNAAIF   88 (174)
Q Consensus        68 ~~~~~~~~g~id~li~~ag~~   88 (174)
                      .+.+.+..++.|++|.++|..
T Consensus       239 ~~~~~~~~~gaDVVIetag~p  259 (509)
T PRK09424        239 MALFAEQAKEVDIIITTALIP  259 (509)
T ss_pred             HHHHHhccCCCCEEEECCCCC
Confidence            222233346799999999874

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.42  E-value=0.0022  Score=50.64  Aligned_cols=71  Identities=13%  Similarity=0.156  Sum_probs=48.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|+ |.+|+..++.+.+.|++|++++++.+..++....+    +..   +..+..+.+.+.+.+       ...|++
T Consensus       170 VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~----g~~---v~~~~~~~~~l~~~l-------~~aDvV  234 (370)
T TIGR00518       170 VTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF----GGR---IHTRYSNAYEIEDAV-------KRADLL  234 (370)
T ss_pred             EEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc----Cce---eEeccCCHHHHHHHH-------ccCCEE
Confidence            678877 78999999999999999999998866544333222    111   223444545444433       368999


Q ss_pred             Eecccc
Q 035504           82 VNNAAI   87 (174)
Q Consensus        82 i~~ag~   87 (174)
                      |++++.
T Consensus       235 I~a~~~  240 (370)
T TIGR00518       235 IGAVLI  240 (370)
T ss_pred             EEcccc
Confidence            999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK06849 hypothetical protein; Provisional

Probab=97.38  E-value=0.002  Score=51.14  Aligned_cols=80  Identities=16%  Similarity=0.128  Sum_probs=51.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||||++.++|..+++.|.+.|++|++++..........+.+     +....+...-.|.+...+.+.++.++. ++|.
T Consensus         6 ~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-----d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id~   79 (389)
T PRK06849          6 TVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-----DGFYTIPSPRWDPDAYIQALLSIVQRE-NIDL   79 (389)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-----hheEEeCCCCCCHHHHHHHHHHHHHHc-CCCE
Confidence            5899999999999999999999999999988754322111111     112222112234444444444455554 4899


Q ss_pred             EEeccc
Q 035504           81 LVNNAA   86 (174)
Q Consensus        81 li~~ag   86 (174)
                      +|....
T Consensus        80 vIP~~e   85 (389)
T PRK06849         80 LIPTCE   85 (389)
T ss_pred             EEECCh
Confidence            998775

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.36  E-value=0.00025  Score=52.02  Aligned_cols=117  Identities=20%  Similarity=0.225  Sum_probs=79.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCe-EEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GII-VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      .+||||+-|-+|..+|+.|-.+ |-+ |++.+-..+.. ...        +.--++-.|+.|...+++++-.-     +|
T Consensus        46 rvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-~V~--------~~GPyIy~DILD~K~L~eIVVn~-----RI  111 (366)
T KOG2774|consen   46 RVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-NVT--------DVGPYIYLDILDQKSLEEIVVNK-----RI  111 (366)
T ss_pred             eEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-hhc--------ccCCchhhhhhccccHHHhhccc-----cc
Confidence            4799999999999999988765 654 66655443321 111        12456778999999998876433     89


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |.+||-.+..+...+.          +   . +          -..++|+.|.-++++.+    ++.  .--+|+-|..|
T Consensus       112 dWL~HfSALLSAvGE~----------N---V-p----------LA~~VNI~GvHNil~vA----a~~--kL~iFVPSTIG  161 (366)
T KOG2774|consen  112 DWLVHFSALLSAVGET----------N---V-P----------LALQVNIRGVHNILQVA----AKH--KLKVFVPSTIG  161 (366)
T ss_pred             ceeeeHHHHHHHhccc----------C---C-c----------eeeeecchhhhHHHHHH----HHc--CeeEeeccccc
Confidence            9999999875432211          0   0 1          12689999999998887    333  24477888777


Q ss_pred             ccc
Q 035504          159 KLK  161 (174)
Q Consensus       159 ~~~  161 (174)
                      .++
T Consensus       162 AFG  164 (366)
T KOG2774|consen  162 AFG  164 (366)
T ss_pred             ccC
Confidence            665

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.31  E-value=0.0013  Score=50.11  Aligned_cols=71  Identities=18%  Similarity=0.193  Sum_probs=50.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|.|+ ||.|++++..|++.|+ +|.+++|+.+++++..+++....+. ..+..     .+++.+       .....|+
T Consensus       130 vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~-~~~~~-----~~~~~~-------~~~~aDi  195 (284)
T PRK12549        130 VVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPA-ARATA-----GSDLAA-------ALAAADG  195 (284)
T ss_pred             EEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCC-eEEEe-----ccchHh-------hhCCCCE
Confidence            678887 8899999999999997 6999999988888888877654332 22211     112221       1236899


Q ss_pred             EEeccc
Q 035504           81 LVNNAA   86 (174)
Q Consensus        81 li~~ag   86 (174)
                      +||+..
T Consensus       196 VInaTp  201 (284)
T PRK12549        196 LVHATP  201 (284)
T ss_pred             EEECCc
Confidence            999953

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.28  E-value=0.00082  Score=50.36  Aligned_cols=75  Identities=16%  Similarity=0.237  Sum_probs=54.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .++|.||++- |+.++++|.++|++|+...++.......    ...   ....+..+..|.+++.+++.+-     ++|.
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~----~~~---g~~~v~~g~l~~~~l~~~l~~~-----~i~~   68 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLY----PIH---QALTVHTGALDPQELREFLKRH-----SIDI   68 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccc----ccc---CCceEEECCCCHHHHHHHHHhc-----CCCE
Confidence            4799999887 9999999999999999988876432221    111   1234556667777777777544     7999


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      +|+.+..+
T Consensus        69 VIDAtHPf   76 (256)
T TIGR00715        69 LVDATHPF   76 (256)
T ss_pred             EEEcCCHH
Confidence            99988643

This enzyme was found to be a monomer by gel filtration.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.24  E-value=0.0035  Score=48.94  Aligned_cols=31  Identities=26%  Similarity=0.491  Sum_probs=27.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|..+++.|++.|. ++.+++++
T Consensus        26 ~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D   57 (338)
T PRK12475         26 HVLIVGA-GALGAANAEALVRAGIGKLTIADRD   57 (338)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4788887 8899999999999997 78889886

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.22  E-value=0.0018  Score=49.22  Aligned_cols=73  Identities=21%  Similarity=0.287  Sum_probs=52.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|.|| ||-+++++..|++.|+ ++.++.|+.++++++++.+.+.+.   .....+..+.+..+           ..|+
T Consensus       129 vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~---~~~~~~~~~~~~~~-----------~~dl  193 (283)
T COG0169         129 VLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA---AVEAAALADLEGLE-----------EADL  193 (283)
T ss_pred             EEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc---cccccccccccccc-----------ccCE
Confidence            677776 8999999999999995 799999999998888888876553   11122222222211           4799


Q ss_pred             EEecccccC
Q 035504           81 LVNNAAIFG   89 (174)
Q Consensus        81 li~~ag~~~   89 (174)
                      +||+....-
T Consensus       194 iINaTp~Gm  202 (283)
T COG0169         194 LINATPVGM  202 (283)
T ss_pred             EEECCCCCC
Confidence            999987643

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.22  E-value=0.001  Score=53.73  Aligned_cols=74  Identities=22%  Similarity=0.268  Sum_probs=48.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+++ +|.+.|+.|++.|++|++.+++........+++...+   +.+...+  +...+   ..      .++|.
T Consensus         7 ~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g---~~~~~~~--~~~~~---~~------~~~d~   71 (447)
T PRK02472          7 KVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEG---IKVICGS--HPLEL---LD------EDFDL   71 (447)
T ss_pred             EEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcC---CEEEeCC--CCHHH---hc------CcCCE
Confidence            479999976 9999999999999999999876543333444454433   3332211  11111   11      14899


Q ss_pred             EEecccccC
Q 035504           81 LVNNAAIFG   89 (174)
Q Consensus        81 li~~ag~~~   89 (174)
                      +|+++|+..
T Consensus        72 vV~s~gi~~   80 (447)
T PRK02472         72 MVKNPGIPY   80 (447)
T ss_pred             EEECCCCCC
Confidence            999999853

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.21  E-value=0.0022  Score=49.69  Aligned_cols=77  Identities=18%  Similarity=0.161  Sum_probs=48.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+++++|...+..+...|+ +|+.+.+++++.+...+++   +.+.    ..|..+ +++.+.+.++..  +++|
T Consensus       157 ~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~----vi~~~~-~~~~~~i~~~~~--~gvd  226 (345)
T cd08293         157 TMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDA----AINYKT-DNVAERLRELCP--EGVD  226 (345)
T ss_pred             EEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcE----EEECCC-CCHHHHHHHHCC--CCce
Confidence            489999999999999887777898 7998888765443333323   2121    122222 334444443322  4699


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      +++.+.|.
T Consensus       227 ~vid~~g~  234 (345)
T cd08293         227 VYFDNVGG  234 (345)
T ss_pred             EEEECCCc
Confidence            99988764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.19  E-value=0.0047  Score=44.66  Aligned_cols=77  Identities=21%  Similarity=0.352  Sum_probs=48.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeCh-------------------hHHHHHHHHHhhcCCC-ceeEEEeecC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDE-------------------KRGLEAVEKLKHSGFD-SVIFHQLDVA   59 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~~Dv~   59 (174)
                      +++|.|+ ||+|..+++.|++.|. ++.+++.+.                   .+++...+.+++..+. ++..+..++.
T Consensus        23 ~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i~  101 (202)
T TIGR02356        23 HVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERVT  101 (202)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcCC
Confidence            4678875 8999999999999997 788988762                   2333344555554433 2333333442


Q ss_pred             ChhhHHHHHHHHHhhcCCccEEEeccc
Q 035504           60 DPATIHSLADFVRSQFGKLDILVNNAA   86 (174)
Q Consensus        60 ~~~~i~~~~~~~~~~~g~id~li~~ag   86 (174)
                       .+.+.+.       +.+.|++|.+..
T Consensus       102 -~~~~~~~-------~~~~D~Vi~~~d  120 (202)
T TIGR02356       102 -AENLELL-------INNVDLVLDCTD  120 (202)
T ss_pred             -HHHHHHH-------HhCCCEEEECCC
Confidence             2333333       337888888763

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.18  E-value=0.0021  Score=49.52  Aligned_cols=77  Identities=18%  Similarity=0.182  Sum_probs=48.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+++++|...+..+...|++|+.+.++.++.+ .++++   +.+.    ..|..+.+...+.+..+.  -+++|+
T Consensus       141 ~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~-~~~~l---Ga~~----vi~~~~~~~~~~~~~~~~--~~gvdv  210 (325)
T TIGR02825       141 TVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVA-YLKKL---GFDV----AFNYKTVKSLEETLKKAS--PDGYDC  210 (325)
T ss_pred             EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHc---CCCE----EEeccccccHHHHHHHhC--CCCeEE
Confidence            4799999999999998877778999998888765432 22332   2221    123233334444444332  136899


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      ++.+.|.
T Consensus       211 v~d~~G~  217 (325)
T TIGR02825       211 YFDNVGG  217 (325)
T ss_pred             EEECCCH
Confidence            9998763

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.18  E-value=0.0078  Score=49.37  Aligned_cols=79  Identities=25%  Similarity=0.320  Sum_probs=53.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecC-------------ChhhHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA-------------DPATIHSL   67 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-------------~~~~i~~~   67 (174)
                      +++|.|+ |.+|...+..+...|++|++++++.... +..+.+   +   ..++..|..             +.+..++.
T Consensus       166 kVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rl-e~a~~l---G---a~~v~v~~~e~g~~~~gYa~~~s~~~~~~~  237 (511)
T TIGR00561       166 KVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVK-EQVQSM---G---AEFLELDFKEEGGSGDGYAKVMSEEFIAAE  237 (511)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHc---C---CeEEeccccccccccccceeecCHHHHHHH
Confidence            4788886 9999999999999999999998886643 233333   1   233333321             23444445


Q ss_pred             HHHHHhhcCCccEEEecccc
Q 035504           68 ADFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus        68 ~~~~~~~~g~id~li~~ag~   87 (174)
                      .+.+.++..+.|++|+++-+
T Consensus       238 ~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       238 MELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHhCCCCEEEECccc
Confidence            55566666789999999955

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.13  E-value=0.0026  Score=46.85  Aligned_cols=73  Identities=26%  Similarity=0.341  Sum_probs=51.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHH-HHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVE-KLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~-~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|.|+ |-+|..+|+.|.++|++|+++.++++...+... ++      ....+..|-+|++-++++-      ....|+
T Consensus         3 iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~------~~~~v~gd~t~~~~L~~ag------i~~aD~   69 (225)
T COG0569           3 IIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADEL------DTHVVIGDATDEDVLEEAG------IDDADA   69 (225)
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhc------ceEEEEecCCCHHHHHhcC------CCcCCE
Confidence            456665 889999999999999999999999876655322 22      3677778888877665431      125667


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|-..|-
T Consensus        70 vva~t~~   76 (225)
T COG0569          70 VVAATGN   76 (225)
T ss_pred             EEEeeCC
Confidence            7666653

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=97.09  E-value=0.012  Score=45.17  Aligned_cols=77  Identities=22%  Similarity=0.243  Sum_probs=48.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.|+++++|.+++..+.+.|++|+.+.++.++.+...+.+   +.+  .  ..|..+.+ ..+.+.+.. . +++|+
T Consensus       148 ~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~--~--~~~~~~~~-~~~~v~~~~-~-~~~d~  217 (329)
T cd05288         148 TVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD--A--AINYKTPD-LAEALKEAA-P-DGIDV  217 (329)
T ss_pred             EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc--e--EEecCChh-HHHHHHHhc-c-CCceE
Confidence            4789999999999999999999999998887765433322212   111  1  11222322 222222222 1 47999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      ++++.|.
T Consensus       218 vi~~~g~  224 (329)
T cd05288         218 YFDNVGG  224 (329)
T ss_pred             EEEcchH
Confidence            9998864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.07  E-value=0.0019  Score=47.23  Aligned_cols=62  Identities=23%  Similarity=0.296  Sum_probs=49.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC---eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI---IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +++|||++|-+|.++.+.+...|.   ++++.+..                      .+|+++.++++.++++.     +
T Consensus         3 kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk----------------------d~DLt~~a~t~~lF~~e-----k   55 (315)
T KOG1431|consen    3 KILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK----------------------DADLTNLADTRALFESE-----K   55 (315)
T ss_pred             eEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc----------------------cccccchHHHHHHHhcc-----C
Confidence            489999999999999999998875   34444322                      57889999999999876     6


Q ss_pred             ccEEEecccccC
Q 035504           78 LDILVNNAAIFG   89 (174)
Q Consensus        78 id~li~~ag~~~   89 (174)
                      +-.+||.|+..+
T Consensus        56 PthVIhlAAmVG   67 (315)
T KOG1431|consen   56 PTHVIHLAAMVG   67 (315)
T ss_pred             CceeeehHhhhc
Confidence            778999987644

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.07  E-value=0.0091  Score=42.14  Aligned_cols=32  Identities=28%  Similarity=0.362  Sum_probs=27.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeCh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDE   33 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~   33 (174)
                      +++|.|+ ||+|..+++.|++.|. ++.+++.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            4788886 8999999999999998 598998764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.06  E-value=0.0061  Score=46.43  Aligned_cols=75  Identities=19%  Similarity=0.269  Sum_probs=50.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|.|+ ||-+++++..|++.|+ ++.++.|+.++++++.+.+....+.... ...+   ..++....       ...|+
T Consensus       130 vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~---~~~~~~~~-------~~~di  197 (283)
T PRK14027        130 VVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVD---ARGIEDVI-------AAADG  197 (283)
T ss_pred             EEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE-EecC---HhHHHHHH-------hhcCE
Confidence            678887 9999999999999997 6889999988888877776544332111 1122   11222111       25899


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      +||+..+.
T Consensus       198 vINaTp~G  205 (283)
T PRK14027        198 VVNATPMG  205 (283)
T ss_pred             EEEcCCCC
Confidence            99988653

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.03  E-value=0.0032  Score=50.45  Aligned_cols=73  Identities=12%  Similarity=0.196  Sum_probs=51.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ ||+|..+++.|..+|+ +++++.|+.+.+.+..+++..     ..     +...+++       .+.....|
T Consensus       183 kvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~-----~~-----~~~~~~l-------~~~l~~aD  244 (414)
T PRK13940        183 NVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-----AS-----AHYLSEL-------PQLIKKAD  244 (414)
T ss_pred             EEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC-----Ce-----EecHHHH-------HHHhccCC
Confidence            3788887 9999999999999996 699999998776666655421     11     1112222       23334789


Q ss_pred             EEEecccccCcc
Q 035504           80 ILVNNAAIFGVS   91 (174)
Q Consensus        80 ~li~~ag~~~~~   91 (174)
                      ++|++.+..++.
T Consensus       245 iVI~aT~a~~~v  256 (414)
T PRK13940        245 IIIAAVNVLEYI  256 (414)
T ss_pred             EEEECcCCCCee
Confidence            999999876544

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.03  E-value=0.0047  Score=47.02  Aligned_cols=74  Identities=19%  Similarity=0.177  Sum_probs=50.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|.|+ ||.+++++..|.+.|+ +|.++.|+.++++++++++....  .+.  .  +...+++.       +.....|+
T Consensus       128 vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~--~~~--~--~~~~~~~~-------~~~~~~Di  193 (282)
T TIGR01809       128 GLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG--VIT--R--LEGDSGGL-------AIEKAAEV  193 (282)
T ss_pred             EEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC--cce--e--ccchhhhh-------hcccCCCE
Confidence            677876 9999999999999997 69999999888877777664321  111  1  11111221       12246899


Q ss_pred             EEecccccC
Q 035504           81 LVNNAAIFG   89 (174)
Q Consensus        81 li~~ag~~~   89 (174)
                      +||+.....
T Consensus       194 VInaTp~g~  202 (282)
T TIGR01809       194 LVSTVPADV  202 (282)
T ss_pred             EEECCCCCC
Confidence            999987643

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.01  E-value=0.0089  Score=46.73  Aligned_cols=31  Identities=26%  Similarity=0.480  Sum_probs=27.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus        26 ~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         26 HVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4788888 8999999999999997 79999875

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.01  E-value=0.0036  Score=49.02  Aligned_cols=76  Identities=24%  Similarity=0.360  Sum_probs=50.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhh-cCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQ-FGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~g~id   79 (174)
                      .+||.||++|+|.+.+...-..|+..+++.++.+ ..+..+.+.+   +    ...|..+++    ..+++++. .+++|
T Consensus       160 ~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e-~~~l~k~lGA---d----~vvdy~~~~----~~e~~kk~~~~~~D  227 (347)
T KOG1198|consen  160 SVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKE-KLELVKKLGA---D----EVVDYKDEN----VVELIKKYTGKGVD  227 (347)
T ss_pred             eEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccc-hHHHHHHcCC---c----EeecCCCHH----HHHHHHhhcCCCcc
Confidence            4799999999999999988888855555555543 3455554432   2    244555533    33333332 56899


Q ss_pred             EEEeccccc
Q 035504           80 ILVNNAAIF   88 (174)
Q Consensus        80 ~li~~ag~~   88 (174)
                      +++.|.|..
T Consensus       228 vVlD~vg~~  236 (347)
T KOG1198|consen  228 VVLDCVGGS  236 (347)
T ss_pred             EEEECCCCC
Confidence            999999974

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.00  E-value=0.0028  Score=48.60  Aligned_cols=72  Identities=19%  Similarity=0.282  Sum_probs=46.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+++++|.++++.+...|.+++.+.++.+..+.. .   ..+..  ..+  |.   ++..+.+    .+..++|+
T Consensus       165 ~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~~~~--~~~--~~---~~~~~~~----~~~~~~d~  229 (332)
T cd08259         165 TVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-K---ELGAD--YVI--DG---SKFSEDV----KKLGGADV  229 (332)
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-H---HcCCc--EEE--ec---HHHHHHH----HhccCCCE
Confidence            479999999999999999999999999888776543222 2   22211  111  21   1122222    22347999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +++++|.
T Consensus       230 v~~~~g~  236 (332)
T cd08259         230 VIELVGS  236 (332)
T ss_pred             EEECCCh
Confidence            9999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.99  E-value=0.014  Score=39.69  Aligned_cols=77  Identities=17%  Similarity=0.289  Sum_probs=48.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeCh-------------------hHHHHHHHHHhhcCCC-ceeEEEeecC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDE-------------------KRGLEAVEKLKHSGFD-SVIFHQLDVA   59 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~~Dv~   59 (174)
                      +++|.|+ ||+|.++++.|++.|. ++.+++.+.                   .+++..++.+++..+. ++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4788987 8999999999999997 588886541                   1233334455555433 3444554543


Q ss_pred             ChhhHHHHHHHHHhhcCCccEEEeccc
Q 035504           60 DPATIHSLADFVRSQFGKLDILVNNAA   86 (174)
Q Consensus        60 ~~~~i~~~~~~~~~~~g~id~li~~ag   86 (174)
                      +.. .       .+.+.+.|++|.+..
T Consensus        80 ~~~-~-------~~~~~~~diVi~~~d   98 (143)
T cd01483          80 EDN-L-------DDFLDGVDLVIDAID   98 (143)
T ss_pred             hhh-H-------HHHhcCCCEEEECCC
Confidence            322 1       223347888888874

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.98  E-value=0.011  Score=43.50  Aligned_cols=30  Identities=30%  Similarity=0.458  Sum_probs=24.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEee
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTAR   31 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r   31 (174)
                      +++|.|+ ||+|.++++.|++.|. ++.+++.
T Consensus        23 ~VlivG~-GglGs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          23 RVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4678875 8999999999999997 5777744

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.98  E-value=0.0039  Score=47.39  Aligned_cols=77  Identities=16%  Similarity=0.170  Sum_probs=50.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+++++|.++++.+...|.+|+++.++.+..+.. .++   +.+    ...|..+.+..+.+.+ .. ...++|.
T Consensus       147 ~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~----~~~~~~~~~~~~~~~~-~~-~~~~~d~  216 (325)
T cd08253         147 TVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQA---GAD----AVFNYRAEDLADRILA-AT-AGQGVDV  216 (325)
T ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCC----EEEeCCCcCHHHHHHH-Hc-CCCceEE
Confidence            478999999999999999999999999998876543332 222   211    1234444444343322 22 2236999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +++++|.
T Consensus       217 vi~~~~~  223 (325)
T cd08253         217 IIEVLAN  223 (325)
T ss_pred             EEECCch
Confidence            9998865

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.95  E-value=0.011  Score=39.77  Aligned_cols=76  Identities=26%  Similarity=0.416  Sum_probs=51.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeCh-------------------hHHHHHHHHHhhcCCC-ceeEEEeecCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDE-------------------KRGLEAVEKLKHSGFD-SVIFHQLDVAD   60 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~~Dv~~   60 (174)
                      ++|.|+ +|+|.++++.|++.|. ++.+++.+.                   .+++...+.+++..+. ++..+..++ +
T Consensus         5 v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~-~   82 (135)
T PF00899_consen    5 VLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI-D   82 (135)
T ss_dssp             EEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC-S
T ss_pred             EEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc-c
Confidence            567766 9999999999999997 688887641                   2233445556655443 466666776 4


Q ss_pred             hhhHHHHHHHHHhhcCCccEEEeccc
Q 035504           61 PATIHSLADFVRSQFGKLDILVNNAA   86 (174)
Q Consensus        61 ~~~i~~~~~~~~~~~g~id~li~~ag   86 (174)
                      ++...++++       +.|++|.+..
T Consensus        83 ~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   83 EENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             HHHHHHHHH-------TSSEEEEESS
T ss_pred             ccccccccc-------CCCEEEEecC
Confidence            444555553       7799988763

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.95  E-value=0.0063  Score=39.61  Aligned_cols=71  Identities=31%  Similarity=0.325  Sum_probs=50.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|. +.+|+.+++.|.+.+.+|+++.++++..++..    +.   .+.++..|.+|++.++++      .....+.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~----~~---~~~~i~gd~~~~~~l~~a------~i~~a~~v   66 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR----EE---GVEVIYGDATDPEVLERA------GIEKADAV   66 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HT---TSEEEES-TTSHHHHHHT------TGGCESEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH----hc---ccccccccchhhhHHhhc------CccccCEE
Confidence            467777 57999999999997779999999976544433    22   277889999998877643      22356777


Q ss_pred             Eeccc
Q 035504           82 VNNAA   86 (174)
Q Consensus        82 i~~ag   86 (174)
                      |....
T Consensus        67 v~~~~   71 (116)
T PF02254_consen   67 VILTD   71 (116)
T ss_dssp             EEESS
T ss_pred             EEccC
Confidence            76663

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.95  E-value=0.006  Score=46.24  Aligned_cols=77  Identities=16%  Similarity=0.221  Sum_probs=49.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+++++|.++++.+...|++++++.++.+..+.. +++   +.+    ...+..+.+..+++ .+... .+++|.
T Consensus       142 ~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~----~~~~~~~~~~~~~~-~~~~~-~~~~d~  211 (323)
T cd05276         142 TVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GAD----VAINYRTEDFAEEV-KEATG-GRGVDV  211 (323)
T ss_pred             EEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC----EEEeCCchhHHHHH-HHHhC-CCCeEE
Confidence            478999999999999999999999999998876543332 322   211    12333332222222 22221 246999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +++++|.
T Consensus       212 vi~~~g~  218 (323)
T cd05276         212 ILDMVGG  218 (323)
T ss_pred             EEECCch
Confidence            9999874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.93  E-value=0.0062  Score=43.42  Aligned_cols=70  Identities=17%  Similarity=0.150  Sum_probs=41.8

Q ss_pred             CCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEecccc
Q 035504            8 NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus         8 ~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~ag~   87 (174)
                      ||-.|.++|+.+..+|++|.++..... ...         +..+..+.  +.+.   +++.+.+.+.+...|++|++|++
T Consensus        28 SG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~---------p~~~~~i~--v~sa---~em~~~~~~~~~~~Di~I~aAAV   92 (185)
T PF04127_consen   28 SGKMGAALAEEAARRGAEVTLIHGPSS-LPP---------PPGVKVIR--VESA---EEMLEAVKELLPSADIIIMAAAV   92 (185)
T ss_dssp             -SHHHHHHHHHHHHTT-EEEEEE-TTS--------------TTEEEEE---SSH---HHHHHHHHHHGGGGSEEEE-SB-
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEecCcc-ccc---------cccceEEE--ecch---hhhhhhhccccCcceeEEEecch
Confidence            578999999999999999999887632 110         12354444  4344   44444555555666999999999


Q ss_pred             cCccC
Q 035504           88 FGVSV   92 (174)
Q Consensus        88 ~~~~~   92 (174)
                      ..+.+
T Consensus        93 sDf~p   97 (185)
T PF04127_consen   93 SDFRP   97 (185)
T ss_dssp             -SEEE
T ss_pred             hheee
Confidence            76554

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.93  E-value=0.0019  Score=53.38  Aligned_cols=42  Identities=29%  Similarity=0.348  Sum_probs=35.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL   43 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   43 (174)
                      +++|+|+ +|+|++++..|+++|++|++++|+.+++++..+++
T Consensus       381 ~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        381 LFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            4799999 69999999999999999999999877766665554

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.86  E-value=0.005  Score=41.14  Aligned_cols=86  Identities=21%  Similarity=0.236  Sum_probs=51.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEe-eChhHHHHHHHHHhhcC-------CCceeEEEeecCChhhHHHHHHHHHh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTA-RDEKRGLEAVEKLKHSG-------FDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~-------~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      +-|.|+ |-+|.++++.|.+.|+.|..+. |+..+.++..+.+....       ..+...+-.-+.|. .|..+++++..
T Consensus        13 I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~La~   90 (127)
T PF10727_consen   13 IGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQLAQ   90 (127)
T ss_dssp             EEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHHHHC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHHHHH
Confidence            567777 8899999999999999988775 44444444443332110       01234444445453 78888888887


Q ss_pred             h--cCCccEEEecccccC
Q 035504           74 Q--FGKLDILVNNAAIFG   89 (174)
Q Consensus        74 ~--~g~id~li~~ag~~~   89 (174)
                      .  +.+=.+|+|++|...
T Consensus        91 ~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   91 YGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             C--S-TT-EEEES-SS--
T ss_pred             hccCCCCcEEEECCCCCh
Confidence            6  444469999999743

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.85  E-value=0.022  Score=44.11  Aligned_cols=73  Identities=18%  Similarity=0.201  Sum_probs=50.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCC--CceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++.|+|+ |.+|..++..|+..|.  ++++++++.+.+...+.++....+  .+.... .  .+.++           +.
T Consensus         8 ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~-----------~~   72 (315)
T PRK00066          8 KVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD-----------CK   72 (315)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH-----------hC
Confidence            3789998 9999999999999886  799999987766666666654221  122222 1  22222           23


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      ..|++|..+|..
T Consensus        73 ~adivIitag~~   84 (315)
T PRK00066         73 DADLVVITAGAP   84 (315)
T ss_pred             CCCEEEEecCCC
Confidence            789999999973

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.84  E-value=0.0074  Score=46.29  Aligned_cols=73  Identities=22%  Similarity=0.349  Sum_probs=45.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecC-ChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA-DPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++.|+|+++ +|.--++.--+.|++|++++++..+-++..+.|.+   +   . -.|.+ |++.+.++...+   .+.+|
T Consensus       184 ~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGA---d---~-fv~~~~d~d~~~~~~~~~---dg~~~  252 (360)
T KOG0023|consen  184 WVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGA---D---V-FVDSTEDPDIMKAIMKTT---DGGID  252 (360)
T ss_pred             EEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCc---c---e-eEEecCCHHHHHHHHHhh---cCcce
Confidence            367899876 99876666666799999999987665666655532   2   1 23444 666665555422   23445


Q ss_pred             EEEec
Q 035504           80 ILVNN   84 (174)
Q Consensus        80 ~li~~   84 (174)
                      .++|.
T Consensus       253 ~v~~~  257 (360)
T KOG0023|consen  253 TVSNL  257 (360)
T ss_pred             eeeec
Confidence            44444

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.81  E-value=0.02  Score=43.68  Aligned_cols=76  Identities=21%  Similarity=0.215  Sum_probs=49.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc-CCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF-GKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-g~id   79 (174)
                      |++|++|++.+|.-....---+|++|+.+.-++++..-..+++   +.+.    ..|...+ +..+.+   ++.. .+||
T Consensus       153 tvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l---GfD~----~idyk~~-d~~~~L---~~a~P~GID  221 (340)
T COG2130         153 TVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL---GFDA----GIDYKAE-DFAQAL---KEACPKGID  221 (340)
T ss_pred             EEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc---CCce----eeecCcc-cHHHHH---HHHCCCCeE
Confidence            6899999999998666544457999999988877655554444   2221    2233333 344333   3333 4899


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      +.+-|.|-
T Consensus       222 vyfeNVGg  229 (340)
T COG2130         222 VYFENVGG  229 (340)
T ss_pred             EEEEcCCc
Confidence            99999985

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.81  E-value=0.013  Score=47.26  Aligned_cols=74  Identities=19%  Similarity=0.068  Sum_probs=51.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-------CC--eEEEEeeChhHHHHHHHHHhhcC-C--CceeEEEeecCChhhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASN-------GI--IVVLTARDEKRGLEAVEKLKHSG-F--DSVIFHQLDVADPATIHSLA   68 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-------g~--~v~~~~r~~~~~~~~~~~l~~~~-~--~~~~~~~~Dv~~~~~i~~~~   68 (174)
                      .+.|+|++|.+|.+++..|+..       +.  ++++++++.+.++-.+.+|+..- +  .++.+. .  .+.+      
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~--~~ye------  172 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-I--DPYE------  172 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-c--CCHH------
Confidence            3789999999999999999988       64  69999998877766666665422 1  111111 1  1322      


Q ss_pred             HHHHhhcCCccEEEeccccc
Q 035504           69 DFVRSQFGKLDILVNNAAIF   88 (174)
Q Consensus        69 ~~~~~~~g~id~li~~ag~~   88 (174)
                           .+...|++|..||..
T Consensus       173 -----~~kdaDiVVitAG~p  187 (444)
T PLN00112        173 -----VFQDAEWALLIGAKP  187 (444)
T ss_pred             -----HhCcCCEEEECCCCC
Confidence                 233799999999973

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.81  E-value=0.0028  Score=45.73  Aligned_cols=41  Identities=22%  Similarity=0.359  Sum_probs=33.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK   42 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   42 (174)
                      +++|+|.+ .+|..+++.|.+.|++|++.+++.+...+..+.
T Consensus        30 ~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          30 TVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             EEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            47889985 899999999999999999999887665555444

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK08223 hypothetical protein; Validated

Probab=96.79  E-value=0.019  Score=43.67  Aligned_cols=31  Identities=26%  Similarity=0.342  Sum_probs=26.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus        29 ~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         29 RVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            4788887 8999999999999996 58787664

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.77  E-value=0.013  Score=45.24  Aligned_cols=33  Identities=24%  Similarity=0.329  Sum_probs=29.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeCh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDE   33 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~   33 (174)
                      ++.|.|++|.+|..++..|+..|.  +|++++++.
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            378999999999999999999985  499999854

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.77  E-value=0.025  Score=41.28  Aligned_cols=31  Identities=29%  Similarity=0.409  Sum_probs=26.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus        30 ~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         30 KVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4678886 8999999999999997 48888776

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.75  E-value=0.0073  Score=48.83  Aligned_cols=57  Identities=21%  Similarity=0.301  Sum_probs=41.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIH   65 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~   65 (174)
                      ++|.|+ |.+|..+++.|.++|++|++++++++...+..+..      .+.++..|.++.+.++
T Consensus         3 viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~------~~~~~~gd~~~~~~l~   59 (453)
T PRK09496          3 IIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL------DVRTVVGNGSSPDVLR   59 (453)
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc------CEEEEEeCCCCHHHHH
Confidence            678887 99999999999999999999999876544432211      2555566666555443

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.74  E-value=0.024  Score=44.93  Aligned_cols=31  Identities=26%  Similarity=0.455  Sum_probs=26.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|..+++.|++.|. ++.+++++
T Consensus       137 ~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        137 RVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4677766 8999999999999997 68888876

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.72  E-value=0.024  Score=42.24  Aligned_cols=31  Identities=29%  Similarity=0.495  Sum_probs=26.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus        34 ~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         34 RVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4788888 9999999999999996 67777653

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.72  E-value=0.02  Score=44.15  Aligned_cols=31  Identities=32%  Similarity=0.519  Sum_probs=26.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      .++|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            4788987 9999999999999996 58787654

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.69  E-value=0.0081  Score=46.61  Aligned_cols=33  Identities=33%  Similarity=0.441  Sum_probs=28.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-------eEEEEeeCh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-------IVVLTARDE   33 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-------~v~~~~r~~   33 (174)
                      ++.|+|++|.+|..++..|+..|.       ++++++.+.
T Consensus         4 KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   43 (322)
T cd01338           4 RVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQ   43 (322)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCC
Confidence            378999999999999999998874       799999854

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.69  E-value=0.027  Score=41.73  Aligned_cols=31  Identities=32%  Similarity=0.501  Sum_probs=25.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      .++|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4678875 8999999999999996 58888664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.66  E-value=0.03  Score=40.43  Aligned_cols=31  Identities=29%  Similarity=0.464  Sum_probs=27.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|..++..|++.|. ++++++++
T Consensus        23 ~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        23 TVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4788888 8999999999999998 69999876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.63  E-value=0.028  Score=42.28  Aligned_cols=78  Identities=19%  Similarity=0.149  Sum_probs=50.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCC----CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNG----IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|.||+|.+|..++..|+..|    .++++.+.+++.++....+++..... .  ....++-.++..+.+       ..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~-~--~~~~i~~~~d~~~~~-------~~   70 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEP-L--ADIKVSITDDPYEAF-------KD   70 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhh-c--cCcEEEECCchHHHh-------CC
Confidence            4689998899999999999998    68999999876655555555432111 0  111221111222222       37


Q ss_pred             ccEEEecccccC
Q 035504           78 LDILVNNAAIFG   89 (174)
Q Consensus        78 id~li~~ag~~~   89 (174)
                      .|++|..+|...
T Consensus        71 aDiVv~t~~~~~   82 (263)
T cd00650          71 ADVVIITAGVGR   82 (263)
T ss_pred             CCEEEECCCCCC
Confidence            899999998743

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.58  E-value=0.016  Score=44.25  Aligned_cols=77  Identities=23%  Similarity=0.291  Sum_probs=47.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeCh---hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDE---KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +++|.|+ ||-+++++..|+..|. +|.++.|+.   +++++.++.+....+..+.+  .++.+.+.+       .+...
T Consensus       126 ~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l-------~~~~~  195 (288)
T PRK12749        126 TMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAF-------AEALA  195 (288)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhh-------hhhcc
Confidence            3688887 6679999999999997 699999984   35556655554332211221  111111111       12234


Q ss_pred             CccEEEecccc
Q 035504           77 KLDILVNNAAI   87 (174)
Q Consensus        77 ~id~li~~ag~   87 (174)
                      ..|++||+.-+
T Consensus       196 ~aDivINaTp~  206 (288)
T PRK12749        196 SADILTNGTKV  206 (288)
T ss_pred             cCCEEEECCCC
Confidence            78999998755

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.55  E-value=0.012  Score=47.30  Aligned_cols=70  Identities=19%  Similarity=0.289  Sum_probs=47.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ |.+|..+++.|...|+ +|++++|+.+.+.+.++++.    .       ++.+.++..+.+       ...|
T Consensus       184 ~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g----~-------~~~~~~~~~~~l-------~~aD  244 (423)
T PRK00045        184 KVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG----G-------EAIPLDELPEAL-------AEAD  244 (423)
T ss_pred             EEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC----C-------cEeeHHHHHHHh-------ccCC
Confidence            3788887 9999999999999997 79999998776665555432    1       111112222222       3678


Q ss_pred             EEEecccccC
Q 035504           80 ILVNNAAIFG   89 (174)
Q Consensus        80 ~li~~ag~~~   89 (174)
                      ++|.+.|...
T Consensus       245 vVI~aT~s~~  254 (423)
T PRK00045        245 IVISSTGAPH  254 (423)
T ss_pred             EEEECCCCCC
Confidence            8888877544

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.55  E-value=0.03  Score=44.71  Aligned_cols=118  Identities=16%  Similarity=0.199  Sum_probs=73.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||.|+ |-+|.-+|++|.++| .+|+++.|+.+++.++++++.           .++...+++...+       ...|
T Consensus       180 ~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-----------~~~~~l~el~~~l-------~~~D  240 (414)
T COG0373         180 KVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-----------AEAVALEELLEAL-------AEAD  240 (414)
T ss_pred             eEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-----------CeeecHHHHHHhh-------hhCC
Confidence            3788887 679999999999999 569999999999888888774           1122223333333       3778


Q ss_pred             EEEecccccCccCCCCCcccc--------ccC-CCCccc-------ccccccCHHHHHHhhHhhhhhHHHHHHh
Q 035504           80 ILVNNAAIFGVSVDGDALSGF--------VKD-GEPIKW-------NEIVTPTYELAEKCLRTNYYGSKRMCEV  137 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~--------~~~-~~~~~~-------~~~~~~~~~~~~~~~~~n~~~~~~l~~~  137 (174)
                      ++|.+.|..++.-+...+...        +-| ..|-+.       ....-.+.||++...+-|....--....
T Consensus       241 vVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRdie~~v~~l~~v~l~~iDDL~~iv~~n~~~R~~~~~~  314 (414)
T COG0373         241 VVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRDVEPEVGELPNVFLYTIDDLEEIVEENLEARKEEAAK  314 (414)
T ss_pred             EEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCCCCccccCcCCeEEEehhhHHHHHHHhHHHHHHHHHH
Confidence            888887765544222211111        001 111111       2234468899999988887765544443

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.55  E-value=0.033  Score=43.26  Aligned_cols=74  Identities=22%  Similarity=0.206  Sum_probs=46.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-------eEEEEeeCh--hHHHHHHHHHhhcC-C--CceeEEEeecCChhhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-------IVVLTARDE--KRGLEAVEKLKHSG-F--DSVIFHQLDVADPATIHSLA   68 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-------~v~~~~r~~--~~~~~~~~~l~~~~-~--~~~~~~~~Dv~~~~~i~~~~   68 (174)
                      ++.|+|++|.+|..++..|+..|.       ++++++.+.  +.+.-.+.++.... +  .+... ..  .+.       
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~~--~~~-------   74 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-TT--DPE-------   74 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-ec--ChH-------
Confidence            378999999999999999998873       799999864  22343444443221 0  01111 10  122       


Q ss_pred             HHHHhhcCCccEEEeccccc
Q 035504           69 DFVRSQFGKLDILVNNAAIF   88 (174)
Q Consensus        69 ~~~~~~~g~id~li~~ag~~   88 (174)
                          +.+..-|++|..||..
T Consensus        75 ----~~~~daDvVVitAG~~   90 (323)
T TIGR01759        75 ----EAFKDVDAALLVGAFP   90 (323)
T ss_pred             ----HHhCCCCEEEEeCCCC
Confidence                2233789999999973

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.54  E-value=0.015  Score=51.63  Aligned_cols=74  Identities=23%  Similarity=0.291  Sum_probs=56.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-Ce-------------EEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-II-------------VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHS   66 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~-------------v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~   66 (174)
                      .++|.|+ |.+|...++.|++.. ++             |.+.+++.+.+++..+.+     .++..++.|++|.+++.+
T Consensus       571 rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-----~~~~~v~lDv~D~e~L~~  644 (1042)
T PLN02819        571 NVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-----ENAEAVQLDVSDSESLLK  644 (1042)
T ss_pred             cEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-----CCCceEEeecCCHHHHHH
Confidence            3688887 999999999999863 33             777777766655554433     136788999999988877


Q ss_pred             HHHHHHhhcCCccEEEecccc
Q 035504           67 LADFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus        67 ~~~~~~~~~g~id~li~~ag~   87 (174)
                      +++       ++|+||++...
T Consensus       645 ~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        645 YVS-------QVDVVISLLPA  658 (1042)
T ss_pred             hhc-------CCCEEEECCCc
Confidence            766       69999999865

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.54  E-value=0.015  Score=44.68  Aligned_cols=76  Identities=18%  Similarity=0.229  Sum_probs=46.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.||++++|..++..+...|++|+.+.++.++. +.++++   +.+.    ..|..++ +..+.+.+...  +++|+
T Consensus       146 ~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~-~~l~~~---Ga~~----vi~~~~~-~~~~~v~~~~~--~gvd~  214 (329)
T cd08294         146 TVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV-AWLKEL---GFDA----VFNYKTV-SLEEALKEAAP--DGIDC  214 (329)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHc---CCCE----EEeCCCc-cHHHHHHHHCC--CCcEE
Confidence            478999999999999888888899998888776542 222222   2221    1233232 23222322221  46899


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      ++.+.|.
T Consensus       215 vld~~g~  221 (329)
T cd08294         215 YFDNVGG  221 (329)
T ss_pred             EEECCCH
Confidence            9988764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.53  E-value=0.019  Score=42.51  Aligned_cols=75  Identities=20%  Similarity=0.271  Sum_probs=48.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+++ +|.+++..+...|.+|+.+.++++..+. ++++   +..  .  ..|..+.+....+.   ....+++|.
T Consensus       137 ~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~-~~~~---g~~--~--~~~~~~~~~~~~~~---~~~~~~~d~  204 (271)
T cd05188         137 TVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL-AKEL---GAD--H--VIDYKEEDLEEELR---LTGGGGADV  204 (271)
T ss_pred             EEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH-HHHh---CCc--e--eccCCcCCHHHHHH---HhcCCCCCE
Confidence            478999988 9999999888899999999887654322 2322   211  1  12333333333332   223457999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +++++|.
T Consensus       205 vi~~~~~  211 (271)
T cd05188         205 VIDAVGG  211 (271)
T ss_pred             EEECCCC
Confidence            9999864

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.53  E-value=0.046  Score=41.94  Aligned_cols=34  Identities=26%  Similarity=0.304  Sum_probs=29.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR   35 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~   35 (174)
                      +++|.|. |++|+.+++.|.+.|++|.+++|+.+.
T Consensus       154 kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~  187 (296)
T PRK08306        154 NVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH  187 (296)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            4789997 679999999999999999999998654

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.52  E-value=0.039  Score=43.46  Aligned_cols=31  Identities=29%  Similarity=0.477  Sum_probs=26.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|.++++.|++.|. ++.+++.+
T Consensus        30 ~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         30 KVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4788887 8999999999999996 58888765

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.46  E-value=0.06  Score=40.05  Aligned_cols=31  Identities=26%  Similarity=0.455  Sum_probs=25.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus        26 ~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        26 RVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3677776 8999999999999996 57777664

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.46  E-value=0.017  Score=46.44  Aligned_cols=70  Identities=16%  Similarity=0.205  Sum_probs=47.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ |.+|..+++.|.+.| .+|++++|+.+.+.+.++.+..      ..+  +   .++..+.+.       +.|
T Consensus       182 ~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~------~~i--~---~~~l~~~l~-------~aD  242 (417)
T TIGR01035       182 KALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG------EAV--K---FEDLEEYLA-------EAD  242 (417)
T ss_pred             EEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC------eEe--e---HHHHHHHHh-------hCC
Confidence            4788887 999999999999999 6899999987765555544321      111  1   123333332       678


Q ss_pred             EEEecccccC
Q 035504           80 ILVNNAAIFG   89 (174)
Q Consensus        80 ~li~~ag~~~   89 (174)
                      ++|.+.+...
T Consensus       243 vVi~aT~s~~  252 (417)
T TIGR01035       243 IVISSTGAPH  252 (417)
T ss_pred             EEEECCCCCC
Confidence            8888876544

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK05442 malate dehydrogenase; Provisional

Probab=96.46  E-value=0.0086  Score=46.54  Aligned_cols=33  Identities=33%  Similarity=0.426  Sum_probs=28.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-------eEEEEeeCh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-------IVVLTARDE   33 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-------~v~~~~r~~   33 (174)
                      .+.|+|++|.+|..++..|+..+.       ++++++.++
T Consensus         6 KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~   45 (326)
T PRK05442          6 RVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPP   45 (326)
T ss_pred             EEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCC
Confidence            378999999999999999998763       799998854

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=96.45  E-value=0.027  Score=43.14  Aligned_cols=30  Identities=20%  Similarity=0.385  Sum_probs=25.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEee
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTAR   31 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r   31 (174)
                      +++|.|+ ||+|..+|+.|++.|. ++.+++.
T Consensus         1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~   31 (307)
T cd01486           1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDS   31 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            4788887 8999999999999996 5777754

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.45  E-value=0.049  Score=43.16  Aligned_cols=31  Identities=35%  Similarity=0.621  Sum_probs=26.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus        43 ~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         43 RVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4778877 8999999999999996 78888775

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.44  E-value=0.0038  Score=37.43  Aligned_cols=32  Identities=19%  Similarity=0.297  Sum_probs=21.1

Q ss_pred             CEEEecCCCchhHH--HHHHHHHCCCeEEEEeeCh
Q 035504            1 YAVVTGANKGIGYE--TVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         1 ~~litGa~~giG~~--~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++||+|+|+|.|++  ++..+ ..|++.+.++...
T Consensus        41 ~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   41 KVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             EEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             eEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            38999999999999  66655 6688888776643

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.42  E-value=0.075  Score=41.10  Aligned_cols=74  Identities=15%  Similarity=0.166  Sum_probs=48.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCC--CceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++.|.|+ |.+|..++..|+..|.  ++++++.+.+.+.-...+++...+  ....+...  .|.+++           .
T Consensus         5 Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~~-----------~   70 (312)
T cd05293           5 KVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSVT-----------A   70 (312)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHHh-----------C
Confidence            3689996 9999999999998874  699999887655555555543221  11112211  233222           2


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      +.|++|.+||..
T Consensus        71 ~adivvitaG~~   82 (312)
T cd05293          71 NSKVVIVTAGAR   82 (312)
T ss_pred             CCCEEEECCCCC
Confidence            789999999974

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.42  E-value=0.02  Score=46.33  Aligned_cols=40  Identities=33%  Similarity=0.489  Sum_probs=33.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV   40 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   40 (174)
                      ++.|.||.|++|.++++.|.+.|++|.+.+|+.+...+.+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a   41 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA   41 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence            3789999999999999999999999999999866544433

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.38  E-value=0.019  Score=43.86  Aligned_cols=35  Identities=23%  Similarity=0.249  Sum_probs=30.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG   36 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~   36 (174)
                      +++|.|. |++|.++++.|...|++|.+.+|+.+..
T Consensus       153 ~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~  187 (287)
T TIGR02853       153 NVMVLGF-GRTGMTIARTFSALGARVFVGARSSADL  187 (287)
T ss_pred             EEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            4788888 6799999999999999999999986543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.37  E-value=0.022  Score=39.64  Aligned_cols=85  Identities=16%  Similarity=0.153  Sum_probs=54.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC------CCceeEEEeecCChhhHHHHHHH--HHh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG------FDSVIFHQLDVADPATIHSLADF--VRS   73 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dv~~~~~i~~~~~~--~~~   73 (174)
                      +-+.|. |-+|..+|++|+++|++|.+.+|+++..++..++-....      .....++-.-+.+.+++++++..  +.+
T Consensus         4 Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~~   82 (163)
T PF03446_consen    4 IGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENILA   82 (163)
T ss_dssp             EEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHGG
T ss_pred             EEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHhh
Confidence            456666 789999999999999999999999776655543210000      01245666677888888888887  666


Q ss_pred             hcCCccEEEecccc
Q 035504           74 QFGKLDILVNNAAI   87 (174)
Q Consensus        74 ~~g~id~li~~ag~   87 (174)
                      ...+=.++|++...
T Consensus        83 ~l~~g~iiid~sT~   96 (163)
T PF03446_consen   83 GLRPGKIIIDMSTI   96 (163)
T ss_dssp             GS-TTEEEEE-SS-
T ss_pred             ccccceEEEecCCc
Confidence            65554566666543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK08328 hypothetical protein; Provisional

Probab=96.36  E-value=0.069  Score=39.45  Aligned_cols=31  Identities=26%  Similarity=0.443  Sum_probs=25.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|.++++.|++.|. ++.+++.+
T Consensus        29 ~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         29 KVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4678877 8999999999999996 58888654

>PRK04148 hypothetical protein; Provisional

Probab=96.36  E-value=0.018  Score=38.84  Aligned_cols=52  Identities=19%  Similarity=0.227  Sum_probs=39.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA   62 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~   62 (174)
                      +++.|.+  .|..+|..|.+.|++|+.++.++...++..+.       .+.++..|+.+.+
T Consensus        20 ileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf~p~   71 (134)
T PRK04148         20 IVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL-------GLNAFVDDLFNPN   71 (134)
T ss_pred             EEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-------CCeEEECcCCCCC
Confidence            6777775  88889999999999999999997754433221       3677888887755

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.35  E-value=0.012  Score=42.94  Aligned_cols=41  Identities=24%  Similarity=0.302  Sum_probs=34.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVE   41 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   41 (174)
                      ++.|.||+|.+|.++++.|++.|++|++.+|+++..++..+
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~   42 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA   42 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence            36789988999999999999999999999998776655444

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.35  E-value=0.0087  Score=48.43  Aligned_cols=31  Identities=23%  Similarity=0.193  Sum_probs=26.7

Q ss_pred             EEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            3 VVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         3 litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      +|+||++|+|.++++.|...|++|+.+.+..
T Consensus        42 ~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~   72 (450)
T PRK08261         42 VLVGGAGRLAEALAALLAGLGYDVVANNDGG   72 (450)
T ss_pred             eEEccCchhHHHHHHHHhhCCCeeeecCccc
Confidence            4788889999999999999999998876553

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.35  E-value=0.022  Score=44.01  Aligned_cols=70  Identities=19%  Similarity=0.268  Sum_probs=47.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ |.+|..+++.|...| .+|++++|+.++..+.++++..      .     +.+.+++.+.+.       ..|
T Consensus       180 ~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~------~-----~~~~~~~~~~l~-------~aD  240 (311)
T cd05213         180 KVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG------N-----AVPLDELLELLN-------EAD  240 (311)
T ss_pred             EEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC------e-----EEeHHHHHHHHh-------cCC
Confidence            3678887 999999999999876 5688999987766666655421      1     112223333332       578


Q ss_pred             EEEecccccC
Q 035504           80 ILVNNAAIFG   89 (174)
Q Consensus        80 ~li~~ag~~~   89 (174)
                      ++|.+.+...
T Consensus       241 vVi~at~~~~  250 (311)
T cd05213         241 VVISATGAPH  250 (311)
T ss_pred             EEEECCCCCc
Confidence            8888887643

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.32  E-value=0.028  Score=42.66  Aligned_cols=36  Identities=22%  Similarity=0.367  Sum_probs=31.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG   36 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~   36 (174)
                      +++|+|+++++|.+++..+...|++|+++.++.+..
T Consensus       142 ~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~  177 (325)
T TIGR02824       142 TVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKC  177 (325)
T ss_pred             EEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            478999999999999999999999999988876543

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=96.31  E-value=0.053  Score=41.47  Aligned_cols=31  Identities=32%  Similarity=0.513  Sum_probs=25.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus         1 kVlVVGa-GGlG~eilknLal~Gvg~I~IvD~D   32 (291)
T cd01488           1 KILVIGA-GGLGCELLKNLALSGFRNIHVIDMD   32 (291)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            4788886 8999999999999996 57777653

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.28  E-value=0.026  Score=43.94  Aligned_cols=73  Identities=15%  Similarity=0.232  Sum_probs=45.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ +++|...+..+...|+ +|+++++++++. +.++++   +.+.    ..|..+ +++.+    +.+..+++|
T Consensus       172 ~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~-~~a~~l---Ga~~----vi~~~~-~~~~~----~~~~~g~~D  237 (343)
T PRK09880        172 RVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSL-SLAREM---GADK----LVNPQN-DDLDH----YKAEKGYFD  237 (343)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHH-HHHHHc---CCcE----EecCCc-ccHHH----HhccCCCCC
Confidence            4788986 8999999987778898 588888876543 333333   2221    123322 22322    222335689


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.++|.
T Consensus       238 ~vid~~G~  245 (343)
T PRK09880        238 VSFEVSGH  245 (343)
T ss_pred             EEEECCCC
Confidence            99999884

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.27  E-value=0.052  Score=41.94  Aligned_cols=76  Identities=18%  Similarity=0.116  Sum_probs=46.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++.|+|++|.+|..+|..|+.++  .++++++.+  .++-.+.+|+.... ........ .+ +++       .+.+...
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~-~~~i~~~~-~~-~~~-------y~~~~da   69 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINT-PAKVTGYL-GP-EEL-------KKALKGA   69 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCC-cceEEEec-CC-Cch-------HHhcCCC
Confidence            47899999999999999999888  479999887  22222233332111 11111110 11 111       2233489


Q ss_pred             cEEEeccccc
Q 035504           79 DILVNNAAIF   88 (174)
Q Consensus        79 d~li~~ag~~   88 (174)
                      |++|.+||..
T Consensus        70 DivvitaG~~   79 (310)
T cd01337          70 DVVVIPAGVP   79 (310)
T ss_pred             CEEEEeCCCC
Confidence            9999999974

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.24  E-value=0.031  Score=42.52  Aligned_cols=37  Identities=19%  Similarity=0.358  Sum_probs=32.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL   37 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   37 (174)
                      +++|+|+++++|.+++..+...|++++++.++.+...
T Consensus       147 ~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~  183 (328)
T cd08268         147 SVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD  183 (328)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            4789999999999999999999999999988765433

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK14968 putative methyltransferase; Provisional

Probab=96.24  E-value=0.14  Score=35.97  Aligned_cols=72  Identities=24%  Similarity=0.218  Sum_probs=45.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCc--eeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS--VIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~--~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +|-.|++.|.   ++..+++++.+++.++.++.......+.+...+..+  +.++.+|+.+..         .+  ..+|
T Consensus        27 vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---------~~--~~~d   92 (188)
T PRK14968         27 VLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPF---------RG--DKFD   92 (188)
T ss_pred             EEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccc---------cc--cCce
Confidence            5677776655   455555568899999998765544444444433222  777888864421         11  2689


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      .++.|...
T Consensus        93 ~vi~n~p~  100 (188)
T PRK14968         93 VILFNPPY  100 (188)
T ss_pred             EEEECCCc
Confidence            99988765

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.22  E-value=0.093  Score=40.34  Aligned_cols=73  Identities=22%  Similarity=0.201  Sum_probs=48.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcCCC--ceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFD--SVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|.|+ |++|..++..|+..|  .++++++++.+.+.....+|......  .......  .|.++           +..
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~~-----------l~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYAD-----------AAD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHHH-----------hCC
Confidence            357787 679999999999988  67999999877666666666543211  1122211  22222           237


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      -|++|.++|..
T Consensus        67 aDiVIitag~p   77 (300)
T cd00300          67 ADIVVITAGAP   77 (300)
T ss_pred             CCEEEEcCCCC
Confidence            89999999873

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.19  E-value=0.018  Score=40.90  Aligned_cols=39  Identities=26%  Similarity=0.224  Sum_probs=31.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVE   41 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   41 (174)
                      +.|.|+ |.+|..+|..++..|++|.+.+++++..++..+
T Consensus         2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~   40 (180)
T PF02737_consen    2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARK   40 (180)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHH
T ss_pred             EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhh
Confidence            678888 999999999999999999999999776554433

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.18  E-value=0.035  Score=42.93  Aligned_cols=33  Identities=24%  Similarity=0.133  Sum_probs=29.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeCh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDE   33 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~   33 (174)
                      ++.|+|++|.+|..+|..|+.++.  ++++++.++
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~   35 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG   35 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence            478999999999999999998874  699998875

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.16  E-value=0.04  Score=42.91  Aligned_cols=41  Identities=34%  Similarity=0.537  Sum_probs=32.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL   43 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   43 (174)
                      +++|+|++ |+|...++.....|++|+.+++++++ .+.+++|
T Consensus       169 ~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K-~e~a~~l  209 (339)
T COG1064         169 WVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEK-LELAKKL  209 (339)
T ss_pred             EEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHH-HHHHHHh
Confidence            47899998 99998888777799999999999765 3444444

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.14  E-value=0.13  Score=40.17  Aligned_cols=35  Identities=29%  Similarity=0.345  Sum_probs=29.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG   36 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~   36 (174)
                      +++|.|+ +++|...+..+...|++|+++++++++.
T Consensus       169 ~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~  203 (349)
T TIGR03201       169 LVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKL  203 (349)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHH
Confidence            4789999 9999999988888899998888876653

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.13  E-value=0.15  Score=37.20  Aligned_cols=75  Identities=16%  Similarity=0.062  Sum_probs=48.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhh------------cCCCceeEEEeecCChhhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKH------------SGFDSVIFHQLDVADPATIHSLA   68 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~------------~~~~~~~~~~~Dv~~~~~i~~~~   68 (174)
                      ++|+.|++.|   .-+..|+++|++|+.++.++...+...++-..            ....++.++.+|+.+.+.     
T Consensus        37 rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-----  108 (213)
T TIGR03840        37 RVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA-----  108 (213)
T ss_pred             eEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc-----
Confidence            3778888666   34566789999999999998766553332110            012358888899877542     


Q ss_pred             HHHHhhcCCccEEEecccc
Q 035504           69 DFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus        69 ~~~~~~~g~id~li~~ag~   87 (174)
                          ...+.+|.++-.+..
T Consensus       109 ----~~~~~fD~i~D~~~~  123 (213)
T TIGR03840       109 ----ADLGPVDAVYDRAAL  123 (213)
T ss_pred             ----ccCCCcCEEEechhh
Confidence                112467877776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=96.12  E-value=0.044  Score=46.15  Aligned_cols=30  Identities=20%  Similarity=0.356  Sum_probs=25.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEee
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTAR   31 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r   31 (174)
                      +|+|.|+ ||+|..+++.|++.|. ++.+++.
T Consensus       340 kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~  370 (664)
T TIGR01381       340 KVLLLGA-GTLGCNVARCLIGWGVRHITFVDN  370 (664)
T ss_pred             eEEEECC-cHHHHHHHHHHHHcCCCeEEEEcC
Confidence            4788887 9999999999999996 5878865

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.09  E-value=0.12  Score=37.19  Aligned_cols=31  Identities=23%  Similarity=0.418  Sum_probs=25.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~   32 (174)
                      +++|.|+ +|+|.++++.|++.|.. +.+++.+
T Consensus        21 ~VlviG~-gglGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          21 KVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            4678877 56999999999999974 8787654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=96.08  E-value=0.018  Score=39.59  Aligned_cols=41  Identities=17%  Similarity=0.226  Sum_probs=32.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLK   44 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~   44 (174)
                      ++++|+.+-+|+++|..|.++|.+|++.  +.++-+.+..++.
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~   41 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP   41 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence            5789999999999999999999999988  3344444444443

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.07  E-value=0.11  Score=37.42  Aligned_cols=31  Identities=26%  Similarity=0.468  Sum_probs=25.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ +|+|.++++.|+..|. ++.+++.+
T Consensus        23 ~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          23 RILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             cEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            4678876 6699999999999997 47788654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.06  E-value=0.07  Score=42.46  Aligned_cols=74  Identities=20%  Similarity=0.078  Sum_probs=46.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-e----EE--EE--eeChhHHHHHHHHHhhcC-C--CceeEEEeecCChhhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-I----VV--LT--ARDEKRGLEAVEKLKHSG-F--DSVIFHQLDVADPATIHSLA   68 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~----v~--~~--~r~~~~~~~~~~~l~~~~-~--~~~~~~~~Dv~~~~~i~~~~   68 (174)
                      .+.|+|++|.+|..+|..|+..+. .    +.  ++  +++.+.++-.+.+|...- +  .++.+. .  .+.+      
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~-~--~~y~------  116 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG-I--DPYE------  116 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe-c--CCHH------
Confidence            378999999999999999998863 2    33  44  667666655555554321 1  111111 1  1222      


Q ss_pred             HHHHhhcCCccEEEeccccc
Q 035504           69 DFVRSQFGKLDILVNNAAIF   88 (174)
Q Consensus        69 ~~~~~~~g~id~li~~ag~~   88 (174)
                           .+...|++|..||..
T Consensus       117 -----~~kdaDIVVitAG~p  131 (387)
T TIGR01757       117 -----VFEDADWALLIGAKP  131 (387)
T ss_pred             -----HhCCCCEEEECCCCC
Confidence                 223799999999973

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.00  E-value=0.052  Score=42.74  Aligned_cols=76  Identities=16%  Similarity=0.155  Sum_probs=47.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC-hhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD-PATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~g~i   78 (174)
                      +++|.|+ +++|...+..+...|+ +|+.++++.++.+ .++++   +.+ .   ..|..+ .+++.+.+.++..  +++
T Consensus       188 ~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~-~a~~~---Ga~-~---~i~~~~~~~~~~~~v~~~~~--~g~  256 (368)
T TIGR02818       188 TVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFE-LAKKL---GAT-D---CVNPNDYDKPIQEVIVEITD--GGV  256 (368)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHh---CCC-e---EEcccccchhHHHHHHHHhC--CCC
Confidence            4789985 8999999887777898 6888888765433 33333   211 1   123322 2233343443333  379


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.++|.
T Consensus       257 d~vid~~G~  265 (368)
T TIGR02818       257 DYSFECIGN  265 (368)
T ss_pred             CEEEECCCC
Confidence            999999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK07411 hypothetical protein; Validated

Probab=95.97  E-value=0.089  Score=42.01  Aligned_cols=31  Identities=26%  Similarity=0.376  Sum_probs=26.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus        40 ~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         40 SVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4788887 8999999999999996 57787654

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.97  E-value=0.082  Score=40.37  Aligned_cols=76  Identities=22%  Similarity=0.268  Sum_probs=49.9

Q ss_pred             CEEEecCCCchhHHHHHHHHH-CCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC-Cc
Q 035504            1 YAVVTGANKGIGYETVRQLAS-NGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG-KL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g-~i   78 (174)
                      |++|+||++..|.-+ -++++ .|+.|+..+-+.+...-...++   +.+    ...|.-++.++.+++.+   .++ +|
T Consensus       156 Tv~VSaAsGAvGql~-GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~---G~d----~afNYK~e~~~~~aL~r---~~P~GI  224 (343)
T KOG1196|consen  156 TVFVSAASGAVGQLV-GQFAKLMGCYVVGSAGSKEKVDLLKTKF---GFD----DAFNYKEESDLSAALKR---CFPEGI  224 (343)
T ss_pred             EEEEeeccchhHHHH-HHHHHhcCCEEEEecCChhhhhhhHhcc---CCc----cceeccCccCHHHHHHH---hCCCcc
Confidence            689999999999754 45555 6999988877766543333322   211    13345555567666654   343 89


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |+-+-|.|-
T Consensus       225 DiYfeNVGG  233 (343)
T KOG1196|consen  225 DIYFENVGG  233 (343)
T ss_pred             eEEEeccCc
Confidence            999999986

>PLN00203 glutamyl-tRNA reductase

Probab=95.97  E-value=0.045  Score=45.25  Aligned_cols=74  Identities=22%  Similarity=0.238  Sum_probs=49.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ |.+|..+++.|...|+ +|+++.|+.+.+....+++.   +..+.     +...++....+       ...|
T Consensus       268 kVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~---g~~i~-----~~~~~dl~~al-------~~aD  331 (519)
T PLN00203        268 RVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP---DVEII-----YKPLDEMLACA-------AEAD  331 (519)
T ss_pred             EEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC---CCceE-----eecHhhHHHHH-------hcCC
Confidence            3788888 9999999999999997 69999999877666655542   11111     11222333333       2678


Q ss_pred             EEEecccccCc
Q 035504           80 ILVNNAAIFGV   90 (174)
Q Consensus        80 ~li~~ag~~~~   90 (174)
                      ++|.+.+...+
T Consensus       332 VVIsAT~s~~p  342 (519)
T PLN00203        332 VVFTSTSSETP  342 (519)
T ss_pred             EEEEccCCCCC
Confidence            88888765443

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.94  E-value=0.019  Score=46.99  Aligned_cols=41  Identities=17%  Similarity=0.254  Sum_probs=34.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK   42 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   42 (174)
                      +++|+|+ ||+|+++++.|.+.|++|++.+|+.++.++..++
T Consensus       334 ~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        334 HVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            3789996 7999999999999999999999987666555443

>PRK14851 hypothetical protein; Provisional

Probab=95.92  E-value=0.086  Score=45.04  Aligned_cols=76  Identities=12%  Similarity=0.174  Sum_probs=48.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeCh-------------------hHHHHHHHHHhhcCCC-ceeEEEeecC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDE-------------------KRGLEAVEKLKHSGFD-SVIFHQLDVA   59 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~~Dv~   59 (174)
                      +++|.|+ ||+|..++..|++.|. ++.+++.+.                   .+++-.++.+.+..+. ++..+...++
T Consensus        45 ~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~~i~  123 (679)
T PRK14851         45 KVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPAGIN  123 (679)
T ss_pred             eEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEecCCC
Confidence            4788885 8999999999999996 577776531                   1222334455544433 4666666664


Q ss_pred             ChhhHHHHHHHHHhhcCCccEEEecc
Q 035504           60 DPATIHSLADFVRSQFGKLDILVNNA   85 (174)
Q Consensus        60 ~~~~i~~~~~~~~~~~g~id~li~~a   85 (174)
                       ++.+..+++       ++|+||.+.
T Consensus       124 -~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        124 -ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             -hHHHHHHHh-------CCCEEEECC
Confidence             344555554       678887665

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.91  E-value=0.054  Score=42.02  Aligned_cols=36  Identities=19%  Similarity=0.015  Sum_probs=30.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGL   37 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~   37 (174)
                      ++.|.|| |.+|..++..++..| +++++++.+.+.+.
T Consensus         7 KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~   43 (319)
T PTZ00117          7 KISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQ   43 (319)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccch
Confidence            3689997 889999999999998 78999999865433

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.91  E-value=0.059  Score=35.76  Aligned_cols=80  Identities=14%  Similarity=0.264  Sum_probs=53.7

Q ss_pred             CEEEecCCCchhHHHHHHHHH-CCCeEEEE-eeChhH-H-----------------HHHHHHHhhcCCCceeEEEeecCC
Q 035504            1 YAVVTGANKGIGYETVRQLAS-NGIIVVLT-ARDEKR-G-----------------LEAVEKLKHSGFDSVIFHQLDVAD   60 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~-~g~~v~~~-~r~~~~-~-----------------~~~~~~l~~~~~~~~~~~~~Dv~~   60 (174)
                      .+.|.|++|-+|+.+++.+.+ .+.+++.. .++.++ .                 .+..+++... .+    +..|.|.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-~D----VvIDfT~   76 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-AD----VVIDFTN   76 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH--S----EEEEES-
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-CC----EEEEcCC
Confidence            378999999999999999999 67886655 444310 0                 0112222222 22    5779999


Q ss_pred             hhhHHHHHHHHHhhcCCccEEEecccc
Q 035504           61 PATIHSLADFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus        61 ~~~i~~~~~~~~~~~g~id~li~~ag~   87 (174)
                      ++.+...++.+.++  ++..++-..|.
T Consensus        77 p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   77 PDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             hHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999988888777  68888888886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=95.88  E-value=0.032  Score=42.39  Aligned_cols=86  Identities=17%  Similarity=0.167  Sum_probs=53.7

Q ss_pred             CEEEecCCCchhHH--HHHHHHHCCCeEEEEeeChhH------H-----HHHHHHHhhcCCCceeEEEeecCChhhHHHH
Q 035504            1 YAVVTGANKGIGYE--TVRQLASNGIIVVLTARDEKR------G-----LEAVEKLKHSGFDSVIFHQLDVADPATIHSL   67 (174)
Q Consensus         1 ~~litGa~~giG~~--~a~~l~~~g~~v~~~~r~~~~------~-----~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~   67 (174)
                      .+||.|+|+|.|++  ++..+. .|+..+.+....+.      .     ....++...+-+--..-+..|.-+.+.-+++
T Consensus        43 kVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~kv  121 (398)
T COG3007          43 KVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQKV  121 (398)
T ss_pred             eEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHHHH
Confidence            48999999999987  344444 45665544331110      0     0112223333222345567788777778889


Q ss_pred             HHHHHhhcCCccEEEecccc
Q 035504           68 ADFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus        68 ~~~~~~~~g~id~li~~ag~   87 (174)
                      ++.|++.+|.+|.+|+.-+.
T Consensus       122 Ie~Ik~~~g~vDlvvYSlAs  141 (398)
T COG3007         122 IEAIKQDFGKVDLVVYSLAS  141 (398)
T ss_pred             HHHHHHhhccccEEEEeccC
Confidence            99999999999988876543

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=95.84  E-value=0.046  Score=41.53  Aligned_cols=80  Identities=19%  Similarity=0.227  Sum_probs=58.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++--||++++|.++....-..|.+-+-+-|+.+..+++.++|+..+.+.+      +++++--..-..+.+...+++..-
T Consensus       164 vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~V------iTeeel~~~~~~k~~~~~~~prLa  237 (354)
T KOG0025|consen  164 VIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEV------ITEEELRDRKMKKFKGDNPRPRLA  237 (354)
T ss_pred             eeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceE------ecHHHhcchhhhhhhccCCCceEE
Confidence            45568999999999988888899999999998888999999988765422      233333223333333456788888


Q ss_pred             Eecccc
Q 035504           82 VNNAAI   87 (174)
Q Consensus        82 i~~ag~   87 (174)
                      +||.|.
T Consensus       238 lNcVGG  243 (354)
T KOG0025|consen  238 LNCVGG  243 (354)
T ss_pred             EeccCc
Confidence            888874

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.78  E-value=0.15  Score=42.65  Aligned_cols=56  Identities=20%  Similarity=0.174  Sum_probs=40.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIH   65 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~   65 (174)
                      ++|.|+ +.+|+.++++|.++|.++++++++++..++..+ .      ....+..|.+|++.++
T Consensus       420 iiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-~------g~~~i~GD~~~~~~L~  475 (558)
T PRK10669        420 ALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-R------GIRAVLGNAANEEIMQ  475 (558)
T ss_pred             EEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-C------CCeEEEcCCCCHHHHH
Confidence            466665 889999999999999999999998765444422 1      2556666766655543

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.78  E-value=0.096  Score=39.79  Aligned_cols=35  Identities=20%  Similarity=0.387  Sum_probs=30.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR   35 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~   35 (174)
                      +++|.|+++++|.+++......|++|+.+.++.++
T Consensus       145 ~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~  179 (320)
T cd08243         145 TLLIRGGTSSVGLAALKLAKALGATVTATTRSPER  179 (320)
T ss_pred             EEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            47899999999999999888999999888877654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.75  E-value=0.073  Score=41.89  Aligned_cols=76  Identities=13%  Similarity=0.158  Sum_probs=48.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCCh-hhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP-ATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~g~i   78 (174)
                      +++|.|+ +++|...+..+-..|+ +|+.++++.++.+ .++++   +.+.    ..|..+. +++.+.+.++..  +++
T Consensus       189 ~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~-~~~~l---Ga~~----~i~~~~~~~~~~~~v~~~~~--~g~  257 (368)
T cd08300         189 TVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFE-LAKKF---GATD----CVNPKDHDKPIQQVLVEMTD--GGV  257 (368)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHc---CCCE----EEcccccchHHHHHHHHHhC--CCC
Confidence            4788975 8999999988888899 6888888866533 33333   2221    1233332 235454544433  379


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |.+|.+.|.
T Consensus       258 d~vid~~g~  266 (368)
T cd08300         258 DYTFECIGN  266 (368)
T ss_pred             cEEEECCCC
Confidence            999999874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=95.75  E-value=0.066  Score=35.32  Aligned_cols=66  Identities=24%  Similarity=0.445  Sum_probs=43.4

Q ss_pred             chhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC--CccEEEecccc
Q 035504           10 GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG--KLDILVNNAAI   87 (174)
Q Consensus        10 giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g--~id~li~~ag~   87 (174)
                      |||...+..+...|++|+.+++++.+. +.++++   +   .. ...|..+.+    +.+++.+..+  ++|++|.|+|.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~-~~~~~~---G---a~-~~~~~~~~~----~~~~i~~~~~~~~~d~vid~~g~   68 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKL-ELAKEL---G---AD-HVIDYSDDD----FVEQIRELTGGRGVDVVIDCVGS   68 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHH-HHHHHT---T---ES-EEEETTTSS----HHHHHHHHTTTSSEEEEEESSSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHH-HHHHhh---c---cc-ccccccccc----cccccccccccccceEEEEecCc
Confidence            689999988888999999999986643 333433   2   11 124444433    3344444443  69999999984

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.75  E-value=0.069  Score=41.00  Aligned_cols=76  Identities=17%  Similarity=0.176  Sum_probs=47.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.|+++++|.+++......|++|+.+.++.+..... +++   +.+.  +  .+..+ .+....+.+...  .++|.
T Consensus       142 ~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~--v--~~~~~-~~~~~~~~~~~~--~~vd~  210 (329)
T cd08250         142 TVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---GCDR--P--INYKT-EDLGEVLKKEYP--KGVDV  210 (329)
T ss_pred             EEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---CCce--E--EeCCC-ccHHHHHHHhcC--CCCeE
Confidence            378999999999999988888899998888775543322 222   2111  1  12222 233333333322  36899


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      ++++.|.
T Consensus       211 v~~~~g~  217 (329)
T cd08250         211 VYESVGG  217 (329)
T ss_pred             EEECCcH
Confidence            9998763

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.73  E-value=0.079  Score=40.48  Aligned_cols=77  Identities=22%  Similarity=0.258  Sum_probs=47.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.|+++++|.+++..+...|++|+.+.++.+..+.. +++   +.+ .   ..|..+.+..+.+.. .. ...++|.
T Consensus       145 ~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~---~~~~~~~~~~~~~~~-~~-~~~~~d~  214 (324)
T cd08244         145 VVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GAD-V---AVDYTRPDWPDQVRE-AL-GGGGVTV  214 (324)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCC-E---EEecCCccHHHHHHH-Hc-CCCCceE
Confidence            479999999999999998889999999988876543322 322   211 1   123333322222221 11 1125899


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      ++++.|.
T Consensus       215 vl~~~g~  221 (324)
T cd08244         215 VLDGVGG  221 (324)
T ss_pred             EEECCCh
Confidence            9998764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.73  E-value=0.079  Score=40.51  Aligned_cols=77  Identities=13%  Similarity=0.123  Sum_probs=47.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.|+++++|.+++......|++++.+.++.+..+.. +++   +.+  .++  +..+ .+....+.+... ..++|.
T Consensus       142 ~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~---g~~--~~~--~~~~-~~~~~~i~~~~~-~~~~d~  211 (324)
T cd08292         142 WLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL-RAL---GIG--PVV--STEQ-PGWQDKVREAAG-GAPISV  211 (324)
T ss_pred             EEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH-Hhc---CCC--EEE--cCCC-chHHHHHHHHhC-CCCCcE
Confidence            478999999999999998888999999888776543333 222   211  111  2222 223322332221 125899


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      ++.+.|.
T Consensus       212 v~d~~g~  218 (324)
T cd08292         212 ALDSVGG  218 (324)
T ss_pred             EEECCCC
Confidence            9988774

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.71  E-value=0.13  Score=41.12  Aligned_cols=31  Identities=32%  Similarity=0.473  Sum_probs=25.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus        44 ~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         44 RVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            4788887 8999999999999996 57787654

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.67  E-value=0.1  Score=41.78  Aligned_cols=37  Identities=16%  Similarity=0.270  Sum_probs=28.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC---eEEEEeeChhHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI---IVVLTARDEKRGL   37 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~   37 (174)
                      +++|.|+++++|...+..+...|+   +|+.++++.++.+
T Consensus       178 ~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~  217 (410)
T cd08238         178 NTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLA  217 (410)
T ss_pred             EEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHH
Confidence            478999999999998876666553   7888888866544

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.63  E-value=0.5  Score=36.51  Aligned_cols=73  Identities=21%  Similarity=0.192  Sum_probs=50.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcC----CCceeEEEeecCChhhHHHHHHHHHhh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSG----FDSVIFHQLDVADPATIHSLADFVRSQ   74 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dv~~~~~i~~~~~~~~~~   74 (174)
                      ++.|.|+ |.+|..+|..|+.++.  ++++++.+.+.+.-.+.+|....    ..++....   .|.+++          
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~~----------   66 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDDC----------   66 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHHh----------
Confidence            4678998 9999999999998874  69999998766555555554321    11233332   233332          


Q ss_pred             cCCccEEEeccccc
Q 035504           75 FGKLDILVNNAAIF   88 (174)
Q Consensus        75 ~g~id~li~~ag~~   88 (174)
                       ..-|++|..||..
T Consensus        67 -~~aDivvitaG~~   79 (307)
T cd05290          67 -ADADIIVITAGPS   79 (307)
T ss_pred             -CCCCEEEECCCCC
Confidence             3789999999974

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.59  E-value=0.036  Score=40.12  Aligned_cols=71  Identities=20%  Similarity=0.230  Sum_probs=45.7

Q ss_pred             EEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH-HHHHHhhc--CC--------CceeEEEeecCChhhHHHHHHHH
Q 035504            3 VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE-AVEKLKHS--GF--------DSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         3 litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~l~~~--~~--------~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      ...||+|-||.+++++|++.|++|++.+|+.++..+ ..+.+...  +.        ..+.++..   =.+.+..+..++
T Consensus         4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAV---P~~a~~~v~~~l   80 (211)
T COG2085           4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAV---PFEAIPDVLAEL   80 (211)
T ss_pred             EEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEec---cHHHHHhHHHHH
Confidence            456778999999999999999999999776554333 33333211  11        11333322   235677777778


Q ss_pred             HhhcC
Q 035504           72 RSQFG   76 (174)
Q Consensus        72 ~~~~g   76 (174)
                      .+.++
T Consensus        81 ~~~~~   85 (211)
T COG2085          81 RDALG   85 (211)
T ss_pred             HHHhC
Confidence            77765

>PLN02602 lactate dehydrogenase

Probab=95.57  E-value=0.26  Score=38.80  Aligned_cols=73  Identities=14%  Similarity=0.166  Sum_probs=47.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCC--CceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|+|+ |.+|..+|..|+..+.  ++++++.+.+.+.-.+.++...-+  ....+ ..+ .|.++           +..
T Consensus        40 I~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~dy~~-----------~~d  105 (350)
T PLN02602         40 VSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TDYAV-----------TAG  105 (350)
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CCHHH-----------hCC
Confidence            689996 9999999999998874  699999987655555555543211  11111 111 12222           237


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      -|++|..||..
T Consensus       106 aDiVVitAG~~  116 (350)
T PLN02602        106 SDLCIVTAGAR  116 (350)
T ss_pred             CCEEEECCCCC
Confidence            89999999974

>PRK07877 hypothetical protein; Provisional

Probab=95.57  E-value=0.12  Score=44.45  Aligned_cols=75  Identities=19%  Similarity=0.281  Sum_probs=48.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeCh------------------hHHHHHHHHHhhcCCC-ceeEEEeecC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDE------------------KRGLEAVEKLKHSGFD-SVIFHQLDVA   59 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~------------------~~~~~~~~~l~~~~~~-~~~~~~~Dv~   59 (174)
                      +|+|.|+  |+|..++..|++.|.  ++.+++.+.                  .+++-.++.+.+..+. ++..+...++
T Consensus       109 ~V~IvG~--GlGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~i~  186 (722)
T PRK07877        109 RIGVVGL--SVGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDGLT  186 (722)
T ss_pred             CEEEEEe--cHHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            4899999  399999999999993  788887642                  2233344455554433 4555555554


Q ss_pred             ChhhHHHHHHHHHhhcCCccEEEecc
Q 035504           60 DPATIHSLADFVRSQFGKLDILVNNA   85 (174)
Q Consensus        60 ~~~~i~~~~~~~~~~~g~id~li~~a   85 (174)
                       ++.++++++       ++|+||.|.
T Consensus       187 -~~n~~~~l~-------~~DlVvD~~  204 (722)
T PRK07877        187 -EDNVDAFLD-------GLDVVVEEC  204 (722)
T ss_pred             -HHHHHHHhc-------CCCEEEECC
Confidence             455555544       567766665

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.55  E-value=0.062  Score=43.47  Aligned_cols=57  Identities=28%  Similarity=0.415  Sum_probs=40.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATI   64 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i   64 (174)
                      ++|.|+ |.+|..+++.|.+.|++|++++++++..++..++.     ....++..|.++.+.+
T Consensus       234 iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~L  290 (453)
T PRK09496        234 VMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL-----PNTLVLHGDGTDQELL  290 (453)
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC-----CCCeEEECCCCCHHHH
Confidence            678888 99999999999999999999998876544433321     1244555565555443

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.52  E-value=0.19  Score=40.35  Aligned_cols=36  Identities=31%  Similarity=0.384  Sum_probs=29.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL   37 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   37 (174)
                      +++|.|+ |.||+.+++.+...|++|+++++++.+..
T Consensus       204 tVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~  239 (413)
T cd00401         204 VAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICAL  239 (413)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHH
Confidence            4678887 68999999999999999999988765533

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.50  E-value=0.049  Score=35.88  Aligned_cols=33  Identities=24%  Similarity=0.318  Sum_probs=25.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEE-EeeCh
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVL-TARDE   33 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~-~~r~~   33 (174)
                      ++.|.||+|-+|..+++.|.++- ++++. ++++.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence            37899999999999999999974 46554 44444

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.50  E-value=0.46  Score=36.67  Aligned_cols=72  Identities=22%  Similarity=0.196  Sum_probs=47.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcCC--CceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|.|+ |.+|..++..|+++|  .++++++++.+.....+.++....+  .......   .|.++           ...
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~~-----------l~~   67 (308)
T cd05292           3 VAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYAD-----------CKG   67 (308)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHHH-----------hCC
Confidence            678888 899999999999999  5799999987655544444432211  1111111   22221           237


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      .|++|.++|..
T Consensus        68 aDiViita~~~   78 (308)
T cd05292          68 ADVVVITAGAN   78 (308)
T ss_pred             CCEEEEccCCC
Confidence            89999999874

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.48  E-value=0.14  Score=39.19  Aligned_cols=35  Identities=14%  Similarity=0.362  Sum_probs=30.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR   35 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~   35 (174)
                      +++|.|+++++|.+++..+...|++++++.++.+.
T Consensus       143 ~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~  177 (334)
T PTZ00354        143 SVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEK  177 (334)
T ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            47899999999999999999999998877777554

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.48  E-value=0.31  Score=36.90  Aligned_cols=31  Identities=29%  Similarity=0.359  Sum_probs=25.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~   32 (174)
                      .++|.|+ ||+|.++++.|++.| .++.+++.+
T Consensus        32 ~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         32 HICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3677776 899999999999999 578888764

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.48  E-value=0.22  Score=38.29  Aligned_cols=70  Identities=21%  Similarity=0.270  Sum_probs=46.0

Q ss_pred             EecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcC---CCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            4 VTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSG---FDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         4 itGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      |.|+ |.+|..++..|+..+.  ++++++.+.+.+.-.+.+++...   +.+..+.   ..+.+           .+...
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~---~~~~~-----------~~~da   65 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR---SGDYS-----------DCKDA   65 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe---cCCHH-----------HHCCC
Confidence            3455 8899999999998874  69999998766665555554321   1122222   12332           22378


Q ss_pred             cEEEeccccc
Q 035504           79 DILVNNAAIF   88 (174)
Q Consensus        79 d~li~~ag~~   88 (174)
                      |++|..||..
T Consensus        66 DivVitag~~   75 (299)
T TIGR01771        66 DLVVITAGAP   75 (299)
T ss_pred             CEEEECCCCC
Confidence            9999999973

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.45  E-value=0.11  Score=40.21  Aligned_cols=75  Identities=16%  Similarity=0.198  Sum_probs=45.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ +++|...+..+...|++ |+++++++++. +.++++   +.+    ...|..+++ .+++ .++. ...++|
T Consensus       166 ~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~-~~~~~~---ga~----~~i~~~~~~-~~~~-~~~~-~~~~~d  233 (339)
T cd08239         166 TVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERL-ELAKAL---GAD----FVINSGQDD-VQEI-RELT-SGAGAD  233 (339)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh---CCC----EEEcCCcch-HHHH-HHHh-CCCCCC
Confidence            4788876 89999999988888998 88888776543 333333   211    122333332 2222 2221 112689


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.+.|.
T Consensus       234 ~vid~~g~  241 (339)
T cd08239         234 VAIECSGN  241 (339)
T ss_pred             EEEECCCC
Confidence            99998874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.45  E-value=0.15  Score=37.73  Aligned_cols=31  Identities=29%  Similarity=0.408  Sum_probs=25.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|.++++.|++.|. ++.+++.+
T Consensus        13 ~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755          13 HVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3677776 8999999999999996 68888654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14852 hypothetical protein; Provisional

Probab=95.44  E-value=0.15  Score=44.99  Aligned_cols=76  Identities=21%  Similarity=0.202  Sum_probs=47.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeCh-------------------hHHHHHHHHHhhcCCC-ceeEEEeecC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDE-------------------KRGLEAVEKLKHSGFD-SVIFHQLDVA   59 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~~Dv~   59 (174)
                      +|+|.|+ ||+|..+++.|++.|. ++.+++.+.                   .+++-.++.+++..+. ++..+...+ 
T Consensus       334 rVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~~~I-  411 (989)
T PRK14852        334 RVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPEGV-  411 (989)
T ss_pred             cEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEecCC-
Confidence            4788886 8999999999999996 577775531                   2233334455544433 355555555 


Q ss_pred             ChhhHHHHHHHHHhhcCCccEEEecc
Q 035504           60 DPATIHSLADFVRSQFGKLDILVNNA   85 (174)
Q Consensus        60 ~~~~i~~~~~~~~~~~g~id~li~~a   85 (174)
                      +++.++++++       ++|++|.+.
T Consensus       412 ~~en~~~fl~-------~~DiVVDa~  430 (989)
T PRK14852        412 AAETIDAFLK-------DVDLLVDGI  430 (989)
T ss_pred             CHHHHHHHhh-------CCCEEEECC
Confidence            3345555444       678777655

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.41  E-value=0.12  Score=40.03  Aligned_cols=33  Identities=24%  Similarity=0.430  Sum_probs=29.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      +++|.|+++++|.+++..+...|++++.+.++.
T Consensus       149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~  181 (341)
T cd08290         149 WVIQNGANSAVGQAVIQLAKLLGIKTINVVRDR  181 (341)
T ss_pred             EEEEccchhHHHHHHHHHHHHcCCeEEEEEcCC
Confidence            478999999999999999889999988887764

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.41  E-value=0.041  Score=38.62  Aligned_cols=35  Identities=20%  Similarity=0.214  Sum_probs=29.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR   35 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~   35 (174)
                      +++|.|++.-+|..+++.|.++|++|.++.|+.+.
T Consensus        46 ~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~   80 (168)
T cd01080          46 KVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKN   80 (168)
T ss_pred             EEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchh
Confidence            37899997677999999999999999999987543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PLN02494 adenosylhomocysteinase

Probab=95.40  E-value=0.25  Score=40.36  Aligned_cols=34  Identities=24%  Similarity=0.307  Sum_probs=28.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR   35 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~   35 (174)
                      +++|.|. |.||+.+|+.+...|++|+++.+++..
T Consensus       256 tVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        256 VAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            4677777 699999999999999999999887643

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.38  E-value=0.39  Score=36.92  Aligned_cols=37  Identities=24%  Similarity=0.136  Sum_probs=30.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLE   38 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~   38 (174)
                      ++.|.|+ |.+|..++..++..|. +|++.+++++.+..
T Consensus         4 KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~   41 (307)
T PRK06223          4 KISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQG   41 (307)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHH
Confidence            3678998 8899999999999875 89999997665433

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=95.36  E-value=0.62  Score=34.11  Aligned_cols=75  Identities=15%  Similarity=0.035  Sum_probs=46.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhh------------cCCCceeEEEeecCChhhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKH------------SGFDSVIFHQLDVADPATIHSLA   68 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~------------~~~~~~~~~~~Dv~~~~~i~~~~   68 (174)
                      ++|+.|++.|   .-+..|+++|++|+.++.++...++..++-..            ....++.+..+|+.+...     
T Consensus        40 rvL~~gCG~G---~da~~LA~~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~-----  111 (218)
T PRK13255         40 RVLVPLCGKS---LDMLWLAEQGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTA-----  111 (218)
T ss_pred             eEEEeCCCCh---HhHHHHHhCCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCc-----
Confidence            3678877655   34566788999999999997766554322110            012357778888876532     


Q ss_pred             HHHHhhcCCccEEEecccc
Q 035504           69 DFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus        69 ~~~~~~~g~id~li~~ag~   87 (174)
                          +..+.+|.++-.+..
T Consensus       112 ----~~~~~fd~v~D~~~~  126 (218)
T PRK13255        112 ----ADLADVDAVYDRAAL  126 (218)
T ss_pred             ----ccCCCeeEEEehHhH
Confidence                122456777766644

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.33  E-value=0.69  Score=33.16  Aligned_cols=71  Identities=15%  Similarity=0.162  Sum_probs=43.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      +|-.|++.|.   .+..|+++|++|+.++.++...+...+.....+..++.+...|+.+..           .-+.+|.+
T Consensus        34 vLDiGcG~G~---~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~~-----------~~~~fD~I   99 (197)
T PRK11207         34 TLDLGCGNGR---NSLYLAANGFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNLT-----------FDGEYDFI   99 (197)
T ss_pred             EEEECCCCCH---HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhCC-----------cCCCcCEE
Confidence            5666766554   456677889999999998664444433333333334666666664321           11368988


Q ss_pred             Eeccc
Q 035504           82 VNNAA   86 (174)
Q Consensus        82 i~~ag   86 (174)
                      +.+..
T Consensus       100 ~~~~~  104 (197)
T PRK11207        100 LSTVV  104 (197)
T ss_pred             EEecc
Confidence            87754

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.33  E-value=0.13  Score=39.29  Aligned_cols=35  Identities=14%  Similarity=0.287  Sum_probs=30.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR   35 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~   35 (174)
                      +++|.|+++++|.+++..+...|++++++.++.++
T Consensus       141 ~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~  175 (323)
T cd05282         141 WVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQ  175 (323)
T ss_pred             EEEEcccccHHHHHHHHHHHHCCCeEEEEecChHH
Confidence            47899999999999999999999999888887654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.33  E-value=0.066  Score=40.83  Aligned_cols=32  Identities=22%  Similarity=0.204  Sum_probs=27.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      .++|.|+++-.|++++..|.++|++|.++.|+
T Consensus       161 ~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        161 HAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             EEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            36888887779999999999999988888774

>PLN02740 Alcohol dehydrogenase-like

Probab=95.31  E-value=0.17  Score=40.12  Aligned_cols=76  Identities=12%  Similarity=0.163  Sum_probs=46.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCCh-hhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP-ATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~g~i   78 (174)
                      +++|.|+ +++|...+..+...|+ +|+.+++++++.+ .++++   +.+ .   ..|..+. +++.+.+.++..  +++
T Consensus       201 ~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~-~a~~~---Ga~-~---~i~~~~~~~~~~~~v~~~~~--~g~  269 (381)
T PLN02740        201 SVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFE-KGKEM---GIT-D---FINPKDSDKPVHERIREMTG--GGV  269 (381)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHH-HHHHc---CCc-E---EEecccccchHHHHHHHHhC--CCC
Confidence            4788885 8999999988888898 5888888765433 33333   211 1   1233332 223333333332  269


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.++|.
T Consensus       270 dvvid~~G~  278 (381)
T PLN02740        270 DYSFECAGN  278 (381)
T ss_pred             CEEEECCCC
Confidence            999999985

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.30  E-value=0.14  Score=39.42  Aligned_cols=75  Identities=20%  Similarity=0.214  Sum_probs=43.8

Q ss_pred             EEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEE
Q 035504            3 VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILV   82 (174)
Q Consensus         3 litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li   82 (174)
                      +++||++++|...+......|++|+.+.++.++.+. ++++   +.+  .+  .|..+ +++.+.+.+.... .++|++|
T Consensus       148 v~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~-~~~~---g~~--~~--i~~~~-~~~~~~v~~~~~~-~~~d~vi  217 (324)
T cd08291         148 VHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDL-LKKI---GAE--YV--LNSSD-PDFLEDLKELIAK-LNATIFF  217 (324)
T ss_pred             EEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHc---CCc--EE--EECCC-ccHHHHHHHHhCC-CCCcEEE
Confidence            345999999999988777789999888887654322 2222   222  11  12222 2232223322211 2689999


Q ss_pred             ecccc
Q 035504           83 NNAAI   87 (174)
Q Consensus        83 ~~ag~   87 (174)
                      .+.|.
T Consensus       218 d~~g~  222 (324)
T cd08291         218 DAVGG  222 (324)
T ss_pred             ECCCc
Confidence            98763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=95.30  E-value=0.053  Score=40.80  Aligned_cols=39  Identities=23%  Similarity=0.181  Sum_probs=33.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA   39 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   39 (174)
                      ++-|.|+++.||.++||.|+.++.+..++.|+.+...+.
T Consensus       169 tvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq  207 (351)
T COG5322         169 TVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQ  207 (351)
T ss_pred             eEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhh
Confidence            478999999999999999999999999999886654433

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.29  E-value=0.14  Score=39.15  Aligned_cols=36  Identities=33%  Similarity=0.380  Sum_probs=31.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG   36 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~   36 (174)
                      +++|.|+++++|.+++....+.|++|+.+.++.++.
T Consensus       149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~  184 (326)
T cd08289         149 PVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAA  184 (326)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHH
Confidence            478999999999999998888999999888876543

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.29  E-value=0.58  Score=34.70  Aligned_cols=72  Identities=21%  Similarity=0.149  Sum_probs=45.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      +|=.|+++|   .++..+++.|++|..++-+++..+.....-.+.+   +   ..     +-....++++.+..+++|+|
T Consensus        63 vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~g---v---~i-----~y~~~~~edl~~~~~~FDvV  128 (243)
T COG2227          63 VLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESG---V---NI-----DYRQATVEDLASAGGQFDVV  128 (243)
T ss_pred             EEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhcc---c---cc-----cchhhhHHHHHhcCCCccEE
Confidence            455788888   6899999999999999988765443332222211   1   11     22333445555555789988


Q ss_pred             Eecccc
Q 035504           82 VNNAAI   87 (174)
Q Consensus        82 i~~ag~   87 (174)
                      ++.-=+
T Consensus       129 ~cmEVl  134 (243)
T COG2227         129 TCMEVL  134 (243)
T ss_pred             EEhhHH
Confidence            877644

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.27  E-value=0.089  Score=41.37  Aligned_cols=38  Identities=24%  Similarity=0.262  Sum_probs=28.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA   39 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   39 (174)
                      +++|.|+ +++|...+..+...|++|+++..+.++..+.
T Consensus       186 ~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~  223 (360)
T PLN02586        186 HLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEA  223 (360)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhH
Confidence            4678665 8999999888888899988877665443333

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.25  E-value=0.068  Score=33.41  Aligned_cols=41  Identities=17%  Similarity=0.305  Sum_probs=32.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCC---CeEEEE-eeChhHHHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNG---IIVVLT-ARDEKRGLEAVEKL   43 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g---~~v~~~-~r~~~~~~~~~~~l   43 (174)
                      +.|. |+|.+|.++++.|.+.|   .+|.++ .|++++..+..+++
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            4455 56999999999999999   899866 88877766665554

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.24  E-value=0.12  Score=39.04  Aligned_cols=35  Identities=29%  Similarity=0.438  Sum_probs=30.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR   35 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~   35 (174)
                      +++|.|+++++|.+++..+...|++|+.+.++.+.
T Consensus       142 ~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~  176 (323)
T cd08241         142 TVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEK  176 (323)
T ss_pred             EEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHH
Confidence            37899999999999999999999999998887654

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.23  E-value=0.055  Score=41.03  Aligned_cols=41  Identities=24%  Similarity=0.350  Sum_probs=34.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKL   43 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l   43 (174)
                      ++|.|+ ||-+++++..|.+.|+ +|.+++|+.++++++++.+
T Consensus       125 vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        125 VALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             EEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            677776 9999999999999997 5999999987776665543

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.22  E-value=0.12  Score=40.97  Aligned_cols=34  Identities=24%  Similarity=0.325  Sum_probs=27.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR   35 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~   35 (174)
                      +++|.|+ +++|...+...-..|++|+++.++.++
T Consensus       181 ~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~  214 (375)
T PLN02178        181 RLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK  214 (375)
T ss_pred             EEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence            3677775 899999998888889998888776543

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=95.22  E-value=0.3  Score=41.49  Aligned_cols=81  Identities=21%  Similarity=0.288  Sum_probs=54.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHH--------------HhhcCCCceeEEEeecCChhhHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK--------------LKHSGFDSVIFHQLDVADPATIHSL   67 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~--------------l~~~~~~~~~~~~~Dv~~~~~i~~~   67 (174)
                      ++|.|. +-+|+.+++.|.++|.++++++.+++..++..+.              +++.+-++...+.+-..|.+....+
T Consensus       403 vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~~n~~i  481 (621)
T PRK03562        403 VIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTSLQL  481 (621)
T ss_pred             EEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHHHHHHH
Confidence            456665 7899999999999999999999998765544221              1222223344455555566666667


Q ss_pred             HHHHHhhcCCccEEEe
Q 035504           68 ADFVRSQFGKLDILVN   83 (174)
Q Consensus        68 ~~~~~~~~g~id~li~   83 (174)
                      +..+++.++.+.+++-
T Consensus       482 ~~~ar~~~p~~~iiaR  497 (621)
T PRK03562        482 VELVKEHFPHLQIIAR  497 (621)
T ss_pred             HHHHHHhCCCCeEEEE
Confidence            7777777777766553

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=95.21  E-value=0.3  Score=41.27  Aligned_cols=80  Identities=18%  Similarity=0.255  Sum_probs=49.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHH--------------HHhhcCCCceeEEEeecCChhhHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVE--------------KLKHSGFDSVIFHQLDVADPATIHSL   67 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~--------------~l~~~~~~~~~~~~~Dv~~~~~i~~~   67 (174)
                      ++|.| .+-+|+.+++.|.++|.++++++.+++..++..+              -+++.+-++...+.+-..|.+....+
T Consensus       403 vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~n~~i  481 (601)
T PRK03659        403 VIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPEDTMKI  481 (601)
T ss_pred             EEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHHHHHH
Confidence            45666 4889999999999999999999998776554322              11111222233333334444445556


Q ss_pred             HHHHHhhcCCccEEE
Q 035504           68 ADFVRSQFGKLDILV   82 (174)
Q Consensus        68 ~~~~~~~~g~id~li   82 (174)
                      +..+++.++.+.++.
T Consensus       482 ~~~~r~~~p~~~Iia  496 (601)
T PRK03659        482 VELCQQHFPHLHILA  496 (601)
T ss_pred             HHHHHHHCCCCeEEE
Confidence            666666666655554

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.21  E-value=0.2  Score=38.73  Aligned_cols=76  Identities=22%  Similarity=0.213  Sum_probs=48.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCCC-c-eeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGFD-S-VIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~-~-~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      .+.|+|+ |++|.+++..|+.++.  ++++++...+.++-...+|...... . -..+..| .+.+++           .
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~~-----------~   68 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYEDL-----------K   68 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhhh-----------c
Confidence            3789999 9999999999988763  7999999855444444444322110 0 0111222 222322           2


Q ss_pred             CccEEEecccccC
Q 035504           77 KLDILVNNAAIFG   89 (174)
Q Consensus        77 ~id~li~~ag~~~   89 (174)
                      +-|+++..||...
T Consensus        69 ~aDiVvitAG~pr   81 (313)
T COG0039          69 GADIVVITAGVPR   81 (313)
T ss_pred             CCCEEEEeCCCCC
Confidence            7899999999743

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.19  E-value=0.15  Score=39.52  Aligned_cols=73  Identities=21%  Similarity=0.355  Sum_probs=45.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.|+++++|.+++......|++|+.+.++ + ..+..+++   +.+    ...|..+.+..+.    +. ..+++|.
T Consensus       165 ~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~-~~~~~~~~---g~~----~~~~~~~~~~~~~----l~-~~~~vd~  230 (350)
T cd08248         165 RVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-D-AIPLVKSL---GAD----DVIDYNNEDFEEE----LT-ERGKFDV  230 (350)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-c-hHHHHHHh---CCc----eEEECCChhHHHH----HH-hcCCCCE
Confidence            47899999999999999888899998877654 2 12233332   211    1223333222222    22 2257999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      ++++.|.
T Consensus       231 vi~~~g~  237 (350)
T cd08248         231 ILDTVGG  237 (350)
T ss_pred             EEECCCh
Confidence            9998763

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=95.17  E-value=0.43  Score=36.60  Aligned_cols=34  Identities=26%  Similarity=0.208  Sum_probs=28.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRG   36 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   36 (174)
                      +.|.|+ |.+|..++..|+.+|. +|++.+++++.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~   35 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLP   35 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHH
Confidence            358898 8899999999998875 999999986543

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=95.15  E-value=0.049  Score=40.11  Aligned_cols=112  Identities=16%  Similarity=0.067  Sum_probs=75.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      .++.|+.+..|.++++.-...|..|..+.|+..      ..+.+.+++.+++.+.|+-...-......       ++..+
T Consensus        55 tlvlggnpfsgs~vlk~A~~vv~svgilsen~~------k~~l~sw~~~vswh~gnsfssn~~k~~l~-------g~t~v  121 (283)
T KOG4288|consen   55 TLVLGGNPFSGSEVLKNATNVVHSVGILSENEN------KQTLSSWPTYVSWHRGNSFSSNPNKLKLS-------GPTFV  121 (283)
T ss_pred             HhhhcCCCcchHHHHHHHHhhceeeeEeecccC------cchhhCCCcccchhhccccccCcchhhhc-------CCccc
Confidence            467899999999999999999999999998754      22344455667777777655443332222       55556


Q ss_pred             EecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           82 VNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +-++|..+..                             ..+.++|=.......+++    .+.+..++++||.-..-
T Consensus       122 ~e~~ggfgn~-----------------------------~~m~~ing~ani~a~kaa----~~~gv~~fvyISa~d~~  166 (283)
T KOG4288|consen  122 YEMMGGFGNI-----------------------------ILMDRINGTANINAVKAA----AKAGVPRFVYISAHDFG  166 (283)
T ss_pred             HHHhcCccch-----------------------------HHHHHhccHhhHHHHHHH----HHcCCceEEEEEhhhcC
Confidence            6666553321                             122456666666677777    67777999999997653

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.13  E-value=0.14  Score=40.07  Aligned_cols=72  Identities=22%  Similarity=0.402  Sum_probs=43.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh--hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE--KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++|.|+ +++|...+..+...|++|++++++.  ++-.+.++++   +   ...  .|..+ +++.+     .+..+++
T Consensus       175 ~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~---G---a~~--v~~~~-~~~~~-----~~~~~~~  239 (355)
T cd08230         175 RALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEEL---G---ATY--VNSSK-TPVAE-----VKLVGEF  239 (355)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHc---C---CEE--ecCCc-cchhh-----hhhcCCC
Confidence            4789986 9999999987777899999998842  2222333333   2   122  23322 22222     1123578


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.++|.
T Consensus       240 d~vid~~g~  248 (355)
T cd08230         240 DLIIEATGV  248 (355)
T ss_pred             CEEEECcCC
Confidence            999999884

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein

Probab=95.12  E-value=0.26  Score=36.78  Aligned_cols=31  Identities=29%  Similarity=0.393  Sum_probs=25.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-----------CeEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-----------IIVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-----------~~v~~~~r~   32 (174)
                      +++|.|+ ||+|.++++.|++.|           .++.+++.+
T Consensus        13 ~V~vvG~-GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D   54 (244)
T TIGR03736        13 SVVLVGA-GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDD   54 (244)
T ss_pred             eEEEEcC-ChHHHHHHHHHHHccccccccCCCCCCEEEEECCC
Confidence            4678887 999999999999964           278888764

A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.11  E-value=0.21  Score=39.29  Aligned_cols=76  Identities=11%  Similarity=0.141  Sum_probs=46.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCCh-hhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP-ATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~g~i   78 (174)
                      +++|.|+ +++|...+..+...|+ +|+.++++.++.+ .++++   +.+  .  ..|..+. +++.+.+.++..  +++
T Consensus       190 ~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~-~~~~~---Ga~--~--~i~~~~~~~~~~~~v~~~~~--~~~  258 (369)
T cd08301         190 TVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFE-QAKKF---GVT--E--FVNPKDHDKPVQEVIAEMTG--GGV  258 (369)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHc---CCc--e--EEcccccchhHHHHHHHHhC--CCC
Confidence            4788885 8999998888878898 7988888765432 33333   211  1  1122221 234444444432  268


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |+++.+.|.
T Consensus       259 d~vid~~G~  267 (369)
T cd08301         259 DYSFECTGN  267 (369)
T ss_pred             CEEEECCCC
Confidence            999998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=95.10  E-value=0.31  Score=39.44  Aligned_cols=31  Identities=29%  Similarity=0.464  Sum_probs=26.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC------eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI------IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~------~v~~~~r~   32 (174)
                      .++|.|+ ||+|-++++.|+..|.      ++.+++.+
T Consensus         1 kVlvVGa-GGlGcE~lKnLal~Gv~~g~~G~I~IvD~D   37 (435)
T cd01490           1 KVFLVGA-GAIGCELLKNFALMGVGTGESGEITVTDMD   37 (435)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCcCCCCeEEEECCC
Confidence            4788885 8999999999999997      78888664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.07  E-value=0.076  Score=36.16  Aligned_cols=35  Identities=31%  Similarity=0.330  Sum_probs=29.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE   38 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   38 (174)
                      ++|.|+ |+||..+|.+|.+.|++|.++.|+. ..+.
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~   35 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEA   35 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHH
T ss_pred             CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHh
Confidence            567776 7899999999999999999999987 4444

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.01  E-value=0.2  Score=41.03  Aligned_cols=71  Identities=15%  Similarity=0.116  Sum_probs=46.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|.|+ |++|.++|+.|.++|++|.+++++... .....+.+.+.+   +.+...+-..             .....|.
T Consensus        19 v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~g---v~~~~~~~~~-------------~~~~~D~   81 (480)
T PRK01438         19 VVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALG---ATVRLGPGPT-------------LPEDTDL   81 (480)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcC---CEEEECCCcc-------------ccCCCCE
Confidence            678886 789999999999999999999865432 223334455433   4443322111             0125899


Q ss_pred             EEecccccC
Q 035504           81 LVNNAAIFG   89 (174)
Q Consensus        81 li~~ag~~~   89 (174)
                      +|...|+..
T Consensus        82 Vv~s~Gi~~   90 (480)
T PRK01438         82 VVTSPGWRP   90 (480)
T ss_pred             EEECCCcCC
Confidence            999999843

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=94.97  E-value=0.24  Score=39.08  Aligned_cols=76  Identities=16%  Similarity=0.231  Sum_probs=46.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCCh-hhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP-ATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~g~i   78 (174)
                      +++|.| .+++|.+++..+...|+ +|+.++++.++.+.. +++   +.+    ...+..+. ++....+.++..  +++
T Consensus       193 ~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~l---Ga~----~~i~~~~~~~~~~~~v~~~~~--~~~  261 (373)
T cd08299         193 TCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KEL---GAT----ECINPQDYKKPIQEVLTEMTD--GGV  261 (373)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc----eEecccccchhHHHHHHHHhC--CCC
Confidence            368886 58999999998888998 799998876543332 333   211    11122221 123344443333  469


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |.++++.|.
T Consensus       262 d~vld~~g~  270 (373)
T cd08299         262 DFSFEVIGR  270 (373)
T ss_pred             eEEEECCCC
Confidence            999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=94.97  E-value=0.17  Score=41.10  Aligned_cols=63  Identities=22%  Similarity=0.341  Sum_probs=41.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeCh-------------------hHHHHHHHHHhhcCCC-ceeEEEeecC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDE-------------------KRGLEAVEKLKHSGFD-SVIFHQLDVA   59 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~~Dv~   59 (174)
                      .+|+.|| ||||-++.+-|+..|.+ |.+++-+.                   +++.-.++..+...+. ++..+..|+.
T Consensus        14 riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNRQFLFrkkhVgqsKA~vA~~~v~~Fnpn~~l~~yhanI~   92 (603)
T KOG2013|consen   14 RILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNRQFLFRKKHVGQSKATVAAKAVKQFNPNIKLVPYHANIK   92 (603)
T ss_pred             eEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhhhheeehhhcCchHHHHHHHHHHHhCCCCceEecccccc
Confidence            4788887 89999999999999985 77775531                   1222222333333322 5777778887


Q ss_pred             ChhhH
Q 035504           60 DPATI   64 (174)
Q Consensus        60 ~~~~i   64 (174)
                      +.+.-
T Consensus        93 e~~fn   97 (603)
T KOG2013|consen   93 EPKFN   97 (603)
T ss_pred             CcchH
Confidence            76443

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=94.94  E-value=0.089  Score=40.50  Aligned_cols=36  Identities=31%  Similarity=0.279  Sum_probs=30.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL   37 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   37 (174)
                      +++|.|+ |+||..++..|.+.|++|.++.|..++.+
T Consensus         4 ~I~IiGa-GaiG~~~a~~L~~~G~~V~lv~r~~~~~~   39 (305)
T PRK05708          4 TWHILGA-GSLGSLWACRLARAGLPVRLILRDRQRLA   39 (305)
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEechHHHH
Confidence            3678887 99999999999999999999999764433

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=94.88  E-value=0.19  Score=39.90  Aligned_cols=35  Identities=20%  Similarity=0.334  Sum_probs=29.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR   35 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~   35 (174)
                      +++|.|+++++|.+++..+...|++++.+.++.++
T Consensus       196 ~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~  230 (393)
T cd08246         196 NVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEK  230 (393)
T ss_pred             EEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence            47899999999999998888889998888776554

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=94.87  E-value=0.66  Score=35.58  Aligned_cols=83  Identities=18%  Similarity=0.157  Sum_probs=52.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHH----------HhhcCCCceeEEEeecCChhhHHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK----------LKHSGFDSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~----------l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      +.|.|. |-+|.++++.|.+.|++|++.+|+++..++..+.          +.+.- ....++-.-+.+. .++.+++++
T Consensus         3 Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~-~~~dvIi~~vp~~-~~~~v~~~l   79 (298)
T TIGR00872         3 LGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRL-SAPRVVWVMVPHG-IVDAVLEEL   79 (298)
T ss_pred             EEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhc-CCCCEEEEEcCch-HHHHHHHHH
Confidence            556665 7899999999999999999999987765544321          11100 0112333334444 677788877


Q ss_pred             HhhcCCccEEEecccc
Q 035504           72 RSQFGKLDILVNNAAI   87 (174)
Q Consensus        72 ~~~~g~id~li~~ag~   87 (174)
                      .....+=+++|++...
T Consensus        80 ~~~l~~g~ivid~st~   95 (298)
T TIGR00872        80 APTLEKGDIVIDGGNS   95 (298)
T ss_pred             HhhCCCCCEEEECCCC
Confidence            7665433677776554

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=94.87  E-value=0.3  Score=39.69  Aligned_cols=74  Identities=15%  Similarity=0.168  Sum_probs=46.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHC---CC----eEEEEee--ChhHHHHHHHHHhhcC-C--CceeEEEeecCChhhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASN---GI----IVVLTAR--DEKRGLEAVEKLKHSG-F--DSVIFHQLDVADPATIHSLA   68 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~---g~----~v~~~~r--~~~~~~~~~~~l~~~~-~--~~~~~~~~Dv~~~~~i~~~~   68 (174)
                      .|+||||++-||.++.-++++-   |.    .+++++.  ..+.++-.+-+|+... +  ..+.+. .  .+.+      
T Consensus       125 ~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~--~~~e------  195 (452)
T cd05295         125 QVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T--DLDV------  195 (452)
T ss_pred             EEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E--CCHH------
Confidence            3799999999999999999983   42    3677777  3444544444554321 1  112222 1  1222      


Q ss_pred             HHHHhhcCCccEEEeccccc
Q 035504           69 DFVRSQFGKLDILVNNAAIF   88 (174)
Q Consensus        69 ~~~~~~~g~id~li~~ag~~   88 (174)
                           .+...|++|..+|..
T Consensus       196 -----a~~daDvvIitag~p  210 (452)
T cd05295         196 -----AFKDAHVIVLLDDFL  210 (452)
T ss_pred             -----HhCCCCEEEECCCCC
Confidence                 233899999999973

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=94.87  E-value=0.095  Score=36.22  Aligned_cols=36  Identities=39%  Similarity=0.360  Sum_probs=30.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE   38 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   38 (174)
                      +.|.|| |..|.++|..|+++|++|.+..|+++..++
T Consensus         2 I~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~   37 (157)
T PF01210_consen    2 IAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEE   37 (157)
T ss_dssp             EEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHH
Confidence            567776 889999999999999999999998754443

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=94.79  E-value=0.67  Score=36.05  Aligned_cols=35  Identities=17%  Similarity=0.070  Sum_probs=29.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRG   36 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   36 (174)
                      ++.|.|+ |.+|..++..++..|. ++++++.+++.+
T Consensus         8 KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~   43 (321)
T PTZ00082          8 KISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIP   43 (321)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchh
Confidence            3678995 8899999999999994 899999987643

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=94.79  E-value=0.22  Score=37.60  Aligned_cols=35  Identities=23%  Similarity=0.285  Sum_probs=30.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR   35 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~   35 (174)
                      +++|.|+++++|.+++..+...|++|+.+.++.++
T Consensus       139 ~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~  173 (320)
T cd05286         139 TVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEK  173 (320)
T ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHH
Confidence            47899999999999999888899999888877654

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=94.75  E-value=0.59  Score=36.05  Aligned_cols=32  Identities=31%  Similarity=0.239  Sum_probs=27.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChh
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEK   34 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~   34 (174)
                      +.|.|+ |-+|..+|..++.+|. +|++++..++
T Consensus         4 V~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~   36 (305)
T TIGR01763         4 ISVIGA-GFVGATTAFRLAEKELADLVLLDVVEG   36 (305)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCC
Confidence            568887 8899999999999876 8999998654

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.73  E-value=0.33  Score=37.55  Aligned_cols=35  Identities=23%  Similarity=0.449  Sum_probs=30.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR   35 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~   35 (174)
                      +++|.|+++++|.+++..+-+.|.+|+.+.+++++
T Consensus       168 ~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~  202 (341)
T cd08297         168 WVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEK  202 (341)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            47899999999999999999999999999888654

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=94.72  E-value=0.33  Score=38.17  Aligned_cols=76  Identities=13%  Similarity=0.205  Sum_probs=45.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCCh-hhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP-ATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~g~i   78 (174)
                      +++|.|+ +++|...+......|+ +|+.++++.++. +.++++   +.+.+    .|..+. ..+.+.+.+...  +++
T Consensus       187 ~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~-~~~~~~---ga~~~----i~~~~~~~~~~~~~~~~~~--~g~  255 (365)
T cd08277         187 TVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKF-EKAKEF---GATDF----INPKDSDKPVSEVIREMTG--GGV  255 (365)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHc---CCCcE----eccccccchHHHHHHHHhC--CCC
Confidence            4788875 8999999887778898 688888875543 233333   21111    122111 123333333333  479


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.+.|.
T Consensus       256 d~vid~~g~  264 (365)
T cd08277         256 DYSFECTGN  264 (365)
T ss_pred             CEEEECCCC
Confidence            999998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=94.69  E-value=1.6  Score=34.02  Aligned_cols=64  Identities=19%  Similarity=0.135  Sum_probs=37.7

Q ss_pred             hHHHHHHHHHCCCeEEEEeeChhHHH-HHHHHHhhcCC----------CceeEEEeecCChhhHHHHHHHHHhhc
Q 035504           12 GYETVRQLASNGIIVVLTARDEKRGL-EAVEKLKHSGF----------DSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus        12 G~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~l~~~~~----------~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      |..+|+.|++.|++|.+.+|+.+..+ +..+.+.+.+.          ....++-.-+.+.+.+++++..+....
T Consensus        32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa~L  106 (341)
T TIGR01724        32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIEHV  106 (341)
T ss_pred             HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHhcC
Confidence            78999999999999999998765332 12222322211          013344444556666666655554443

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.67  E-value=0.29  Score=39.00  Aligned_cols=35  Identities=17%  Similarity=0.219  Sum_probs=29.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR   35 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~   35 (174)
                      +++|.|+++++|.+++..+...|++++++.++.++
T Consensus       192 ~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~  226 (398)
T TIGR01751       192 NVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEK  226 (398)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence            47899999999999998888889998887766543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=94.66  E-value=0.2  Score=38.56  Aligned_cols=36  Identities=25%  Similarity=0.438  Sum_probs=31.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG   36 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~   36 (174)
                      +++|.|+++.+|.+++..+...|++++.+.++.++.
T Consensus       165 ~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~  200 (334)
T PRK13771        165 TVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKA  200 (334)
T ss_pred             EEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            479999999999999999999999998888876553

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.64  E-value=0.07  Score=41.65  Aligned_cols=32  Identities=25%  Similarity=0.313  Sum_probs=26.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe---EEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII---VVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~---v~~~~r~   32 (174)
                      .++|.||+|.+|.++++.|.++++.   +..+.+.
T Consensus         3 ~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~   37 (334)
T PRK14874          3 NVAVVGATGAVGREMLNILEERNFPVDKLRLLASA   37 (334)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcc
Confidence            3789999999999999999998764   4555554

>PLN02827 Alcohol dehydrogenase-like

Probab=94.62  E-value=0.33  Score=38.45  Aligned_cols=76  Identities=14%  Similarity=0.244  Sum_probs=45.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC-hhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD-PATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~g~i   78 (174)
                      +++|.|+ +++|...+..+...|++ |+.+++++++. +.++++   +.+ . +  .|..+ .++..+.+.++..  +++
T Consensus       196 ~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~-~~a~~l---Ga~-~-~--i~~~~~~~~~~~~v~~~~~--~g~  264 (378)
T PLN02827        196 SVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKA-EKAKTF---GVT-D-F--INPNDLSEPIQQVIKRMTG--GGA  264 (378)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHc---CCc-E-E--EcccccchHHHHHHHHHhC--CCC
Confidence            4788885 89999998888888985 66776665432 333333   211 1 1  23222 1234444443332  368


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.++|.
T Consensus       265 d~vid~~G~  273 (378)
T PLN02827        265 DYSFECVGD  273 (378)
T ss_pred             CEEEECCCC
Confidence            999999885

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.60  E-value=0.25  Score=38.96  Aligned_cols=75  Identities=20%  Similarity=0.253  Sum_probs=44.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ +++|...+..+...|+ +|+.+++++++. +.++++   +.+    ...|..++ +..+.+.++.  .+++|
T Consensus       194 ~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~-~~a~~~---Ga~----~~i~~~~~-~~~~~i~~~~--~~g~d  261 (371)
T cd08281         194 SVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKL-ALAREL---GAT----ATVNAGDP-NAVEQVRELT--GGGVD  261 (371)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHH-HHHHHc---CCc----eEeCCCch-hHHHHHHHHh--CCCCC
Confidence            4788885 8999998887777899 588888776543 233333   211    11232232 2222222222  23689


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.+.|.
T Consensus       262 ~vid~~G~  269 (371)
T cd08281         262 YAFEMAGS  269 (371)
T ss_pred             EEEECCCC
Confidence            99998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=94.59  E-value=0.62  Score=35.09  Aligned_cols=75  Identities=20%  Similarity=0.247  Sum_probs=48.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhh--cCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQ--FGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~--~g~i   78 (174)
                      ++||--|.+|+|..++..+-..|+.++.+..+.++.+..    .+.+.+    ...|.+.++-++    ++++-  -.++
T Consensus       149 tVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~a----kenG~~----h~I~y~~eD~v~----~V~kiTngKGV  216 (336)
T KOG1197|consen  149 TVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIA----KENGAE----HPIDYSTEDYVD----EVKKITNGKGV  216 (336)
T ss_pred             EEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHH----HhcCCc----ceeeccchhHHH----HHHhccCCCCc
Confidence            478888999999999999999999988887765543222    222222    233444444333    33332  2379


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |+++...|.
T Consensus       217 d~vyDsvG~  225 (336)
T KOG1197|consen  217 DAVYDSVGK  225 (336)
T ss_pred             eeeeccccc
Confidence            999888876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	174
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		2e-50
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		2e-23
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		6e-22
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		5e-21
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		1e-20
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		7e-12
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		7e-12
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		1e-10
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		1e-10
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-10
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-10
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-09
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-09
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-09
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		5e-09
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		6e-09
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		7e-09
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-09
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		9e-09
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-08
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		1e-08
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-08
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-08
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		3e-08
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		3e-08
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		4e-08
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-08
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		7e-08
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-08
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		1e-07
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-07
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		3e-07
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		3e-07
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		4e-07
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		4e-07
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		4e-07
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		5e-07
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		6e-07
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		7e-07
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		7e-07
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		7e-07
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		7e-07
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		7e-07
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		8e-07
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		8e-07
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		8e-07
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		1e-06
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-06
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		1e-06
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		2e-06
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		2e-06
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		2e-06
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-06
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		2e-06
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		2e-06
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		3e-06
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		3e-06
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		3e-06
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		3e-06
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		3e-06
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		3e-06
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		4e-06
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		4e-06
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		5e-06
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		5e-06
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-06
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		7e-06
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		7e-06
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		7e-06
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		1e-05
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		1e-05
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		1e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		2e-05
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		2e-05
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-05
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		2e-05
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-05
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		3e-05
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		3e-05
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		4e-05
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		5e-05
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		7e-05
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		7e-05
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-05
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		8e-05
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		9e-05
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		9e-05
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		1e-04
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-04
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-04
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-04
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-04
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		2e-04
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		2e-04
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		2e-04
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-04
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		2e-04
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		3e-04
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-04
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		3e-04
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		3e-04
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		3e-04
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		4e-04
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-04
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-04
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-04
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		4e-04
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		4e-04
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		5e-04
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		5e-04
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		7e-04
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		7e-04
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		8e-04
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		8e-04

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score =  194 bits (493), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 101/172 (58%), Positives = 124/172 (72%), Gaps = 12/172 (6%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AVVTG NKGIG+E  +QL+SNGI+VVLT RD  +G EAVEKLK+S  ++V+FHQLDV DP
Sbjct: 15  AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDP 74
Query: 62  -ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKD-----------GEPIKW 109
            AT+ SLADF+++ FGKLDILVNNA + G SVD D     + D            E  + 
Sbjct: 75  IATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEA 134
Query: 110 NEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLK 161
            E+++ TYELAE+CL+ NY G K + EVLIPLLQLSD PRIVNVSS+ G LK
Sbjct: 135 QELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLK 186

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score =  105 bits (261), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 91/158 (57%), Gaps = 23/158 (14%)
Query: 2   AVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGANKGIG+  VR L       VVLTARD  RG  AV++L+  G  S  FHQLD+ D
Sbjct: 7   ALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGL-SPRFHQLDIID 65
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             +I +L DF+R ++G LD+LVNNAAI            F  D          TP +  A
Sbjct: 66  LQSIRALCDFLRKEYGGLDVLVNNAAI-----------AFQLDNP--------TPFHIQA 106
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           E  ++TN+ G++ +C  L+PL++     R+VNVSS  G
Sbjct: 107 ELTMKTNFMGTRNVCTELLPLIKPQG--RVVNVSSTEG 142

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score =  100 bits (248), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 92/158 (58%), Gaps = 25/158 (15%)
Query: 2   AVVTGANKGIGYETVRQLAS--NGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
           A+VTG NKGIG   VR L    +G  VVLTARD  RG  AV++L+  G  S  FHQLD+ 
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGD-VVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDID 64
Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           D  +I +L DF+R ++G LD+LVNNA I              K  +P       TP +  
Sbjct: 65  DLQSIRALRDFLRKEYGGLDVLVNNAGI------------AFKVADP-------TPFHIQ 105
Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM 157
           AE  ++TN++G++ +C  L+PL++     R+VNVSS M
Sbjct: 106 AEVTMKTNFFGTRDVCTELLPLIKPQG--RVVNVSSIM 141

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 96.7 bits (239), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 89/155 (57%), Gaps = 23/155 (14%)
Query: 2   AVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGAN+GIG    R+L       VVLTARD  RG  AV++L+  G  S  FHQLD+ D
Sbjct: 5   ALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGL-SPRFHQLDIDD 63
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             +I +L DF+R ++G L++LVNNAA+              K  +P+       P    A
Sbjct: 64  LQSIRALRDFLRKEYGGLNVLVNNAAV------------AFKSDDPM-------PFDIKA 104
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           E  L+TN++ ++ MC  L+P+++     R+VN+SS
Sbjct: 105 EMTLKTNFFATRNMCNELLPIMKPHG--RVVNISS 137

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 91/158 (57%), Gaps = 25/158 (15%)
Query: 2   AVVTGANKGIGYETVRQLAS--NGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
           A+VTG NKGIG   VR L    +G  VVLTARD  RG  AV++L+  G  S  FHQLD+ 
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGD-VVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDID 64
Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           D  +I +L DF+R ++G LD+LVNNA I              K  +P       TP +  
Sbjct: 65  DLQSIRALRDFLRKEYGGLDVLVNNAGI------------AFKVADP-------TPFHIQ 105
Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM 157
           AE  ++TN++G++ +   L+PL++     R+VNVSS M
Sbjct: 106 AEVTMKTNFFGTRDVXTELLPLIKPQG--RVVNVSSIM 141

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 23/164 (14%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG      LA+ G  V+ TA  E  G +A+     +    ++   L+V DP
Sbjct: 8   ALVTGASRGIGRAIAETLAARGAKVIGTATSEN-GAQAISDYLGANGKGLM---LNVTDP 63
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A+I S+ + +R++FG++DILVNNA I       D L   +KD E   WN+I+        
Sbjct: 64  ASIESVLEKIRAEFGEVDILVNNAGI-----TRDNLLMRMKDEE---WNDII-------- 107
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
               TN     R+ + ++  +      RI+ + S +G + N  Q
Sbjct: 108 ---ETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQ 148

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 23/164 (14%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG      LA+ G  V+ TA  E  G +A+     +    ++   L+V DP
Sbjct: 8   ALVTGASRGIGRAIAETLAARGAKVIGTATSEN-GAQAISDYLGANGKGLM---LNVTDP 63
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A+I S+ + +R++FG++DILVNNA I       D L   +KD E   WN+I+        
Sbjct: 64  ASIESVLEKIRAEFGEVDILVNNAGI-----TRDNLLMRMKDEE---WNDII-------- 107
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
               TN     R+ + ++  +      RI+ + S +G + N  Q
Sbjct: 108 ---ETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQ 148

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 16/128 (12%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG      LA+ G  V+ TA  E  G +A+     +    ++   L+V DP
Sbjct: 8   ALVTGASRGIGRAIAETLAARGAKVIGTATSEN-GAQAISDYLGANGKGLM---LNVTDP 63
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIV----TPTY 117
           A+I S+ + +R++FG++DILVNNA I       D L   +KD E   WN+I+    +  +
Sbjct: 64  ASIESVLEKIRAEFGEVDILVNNAGI-----TRDNLLMRMKDEE---WNDIIETNLSSVF 115
Query: 118 ELAEKCLR 125
            L++  +R
Sbjct: 116 RLSKAVMR 123

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
           A+VTGA++GIG     QLA  G  V +     K   EAV E++K  G DS    Q +VAD
Sbjct: 13  ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI-QANVAD 71
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              + ++   V SQFG LD+LVNNA I       D L   +K+ E   W++++       
Sbjct: 72  ADEVKAMIKEVVSQFGSLDVLVNNAGI-----TRDNLLMRMKEQE---WDDVID------ 117
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
                TN  G     +   P +       I+N+SS +G + N  Q
Sbjct: 118 -----TNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQ 157

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AVVTGA++GIG    R+L S G  VVLTARD ++ L AVE+   +       H  D++  
Sbjct: 32  AVVTGASRGIGAAIARKLGSLGARVVLTARDVEK-LRAVEREIVAAGGEAESHACDLSHS 90
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAI--FGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
             I + A  V +  G+ D+LVNNA +  FG         G +   +P +W+ ++      
Sbjct: 91  DAIAAFATGVLAAHGRCDVLVNNAGVGWFG---------GPLHTMKPAEWDALIA----- 136
Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
                  N      +     P +  +    I+N+SS  GK
Sbjct: 137 ------VNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGK 170

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDVAD 60
           A+VTG ++G+G+   + LA  G  VV+ +R+ +   EA +KL    G +++ F + DV++
Sbjct: 24  ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF-RCDVSN 82
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              +  L + V+ +FGKLD +VN A I                 E    +E         
Sbjct: 83  YEEVKKLLEAVKEKFGKLDTVVNAAGI-----------NRRHPAEEFPLDEF-------- 123
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
            + +  N +G+  +C     LL+ SD P I+N+ S
Sbjct: 124 RQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS 158

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
           A+VTGA++GIG     QLA  G  V +     K   EAV E++K  G DS    Q +VAD
Sbjct: 7   ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI-QANVAD 65
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              + +    V SQFG LD+LVNNA I       D L    K+ E   W++++       
Sbjct: 66  ADEVKAXIKEVVSQFGSLDVLVNNAGIT-----RDNLLXRXKEQE---WDDVID------ 111
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
                TN  G     +   P         I+N+SS +G + N  Q
Sbjct: 112 -----TNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQ 151

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 45/84 (53%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          AV+TG++ GIG       A  G  +VL AR   R  EA   LK      V+   +DVA P
Sbjct: 10 AVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATP 69
Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
            + ++ + VRS FG  DILVNNA
Sbjct: 70 EGVDAVVESVRSSFGGADILVNNA 93

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 45/84 (53%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          AV+TG++ GIG       A  G  +VL AR   R  EA   LK      V+   +DVA P
Sbjct: 10 AVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATP 69
Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
            + ++ + VRS FG  DILVNNA
Sbjct: 70 EGVDAVVESVRSSFGGADILVNNA 93

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 41/157 (26%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           V+TGAN G+G  T R+LA  G  V++  RD ++G  A   +       V   +LD+ D +
Sbjct: 20  VITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA----GQVEVRELDLQDLS 75
Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGV----SVDGDALSGFVKDGEPIKWNEIVTPTYE 118
           ++   AD V       D+L+NNA I  V    +VDG                        
Sbjct: 76  SVRRFADGVSGA----DVLINNAGIMAVPYALTVDG------------------------ 107
Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
             E  + TN+ G   +  +L+P  +L+D  R+V VSS
Sbjct: 108 -FESQIGTNHLGHFALTNLLLP--RLTD--RVVTVSS 139

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 45/86 (52%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG     +LAS+G  VV+    +    E V     +     +  Q DV+DP
Sbjct: 30  AIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDP 89
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAI 87
           A +  L       FG +D+LVNNA I
Sbjct: 90  AAVRRLFATAEEAFGGVDVLVNNAGI 115

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 2  AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
          A+VTG+++G+G     +LA NG  IV+  AR +K  LE  E+++  G   V+  + +V  
Sbjct: 7  ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQ 65
Query: 61 PATIHSLADFVRSQFGKLDILVNNAA 86
          PA I  +   +   FG+LD+ VNNAA
Sbjct: 66 PAKIKEMFQQIDETFGRLDVFVNNAA 91

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 22/165 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
           A+VTGA++GIG     +LA  G +V+ TA  E  G E +    K +G +      L+V D
Sbjct: 31  AIVTGASRGIGRAIALELARRGAMVIGTATTEA-GAEGIGAAFKQAGLEGR-GAVLNVND 88
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              + +L +    +FG L++LVNNA I       D L+  +KD E   W+ ++       
Sbjct: 89  ATAVDALVESTLKEFGALNVLVNNAGI-----TQDQLAMRMKDDE---WDAVID------ 134
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
                TN     R+   ++  +  +   RIVN++S +G   N  Q
Sbjct: 135 -----TNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQ 174

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +VTG+  GIG      LA  G  VV+ A       EAV K   +   + I   +DV+DP
Sbjct: 12 GIVTGSGGGIGQAYAEALAREGAAVVV-ADINAEAAEAVAKQIVADGGTAISVAVDVSDP 70
Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFG 89
           +  ++AD   ++FG +D LVNNAAIFG
Sbjct: 71 ESAKAMADRTLAEFGGIDYLVNNAAIFG 98

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TGA  GIG ET R LA  G  VVL    E     A   +        + H +D+ + 
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGA----VHHVVDLTNE 69
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            ++ +L DF    FG+LDI+ NNAA        D     V       W++  T       
Sbjct: 70  VSVRALIDFTIDTFGRLDIVDNNAA------HSDPADMLVTQMTVDVWDDTFT------- 116
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                N  G+  MC+  IP L  +    IVN+SS
Sbjct: 117 ----VNARGTMLMCKYAIPRLISAGGGAIVNISS 146

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           +A++T   KG+G +   +L + G  V +T   +   +E +++      + + F Q DV  
Sbjct: 9   HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK 68
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              +H + +   S FGK+D L+NNA  +    +   L  + +D    +WNE++       
Sbjct: 69  KEDLHKIVEEAMSHFGKIDFLINNAGPY--VFERKKLVDYEED----EWNEMI------- 115
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVN 152
               + N      + ++++P+++  +  RI+N
Sbjct: 116 ----QGNLTAVFHLLKLVVPVMRKQNFGRIIN 143

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 23/164 (14%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG      LA  G  V+ TA  E  G +A+        D+     L+V +P
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSES-GAQAISDYLG---DNGKGMALNVTNP 70
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            +I ++   +  +FG +DILVNNAAI       D L   +K+ E   W++I         
Sbjct: 71  ESIEAVLKAITDEFGGVDILVNNAAI-----TRDNLLMRMKEEE---WSDI--------- 113
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
             + TN     R+ + ++  +      RI+NV S +G + N  Q
Sbjct: 114 --METNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ 155

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 21/165 (12%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
           A+VTG+++G+G     +L + G  +VL        L+A  E+ K +G + V+  + DV +
Sbjct: 8   AIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGIN-VVVAKGDVKN 66
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           P  + ++       FG++DILVNNA   G++ D   L    KD     W++++       
Sbjct: 67  PEDVENMVKTAMDAFGRIDILVNNA---GITRDTLMLKMSEKD-----WDDVLNTN---- 114
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
              L++ Y  +K + +++  L Q S   +I+N++S  G + N  Q
Sbjct: 115 ---LKSAYLCTKAVSKIM--LKQKSG--KIINITSIAGIIGNAGQ 152

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV--EKLKHSGFDSVIFHQLDVA 59
           AV+TGA++GIG    R LA +G  + L AR   R LE +  E ++  G + V +H LDV+
Sbjct: 27  AVITGASRGIGEAIARALARDGYALALGARSVDR-LEKIAHELMQEQGVE-VFYHHLDVS 84
Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAI 87
              ++   +  V  +FG +D++V NA +
Sbjct: 85  KAESVEEFSKKVLERFGDVDVVVANAGL 112

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV--EKLKHSGFDSVIFHQLDVA 59
          AV+TGA++GIG    R LA +G  + L AR   R LE +  E ++  G + V +H LDV+
Sbjct: 5  AVITGASRGIGEAIARALARDGYALALGARSVDR-LEKIAHELMQEQGVE-VFYHHLDVS 62
Query: 60 DPATIHSLADFVRSQFGKLDILVNNAAI 87
             ++   +  V  +FG +D++V NA +
Sbjct: 63 KAESVEEFSKKVLERFGDVDVVVANAGL 90

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 22/160 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A VTG + GIG    R LA+ GI V   ARD K    AV+ L+ +G D V     DV   
Sbjct: 27  AFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD-VDGSSCDVTST 85
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +H+       +FG + ILVN+A   G         G   D +   W ++         
Sbjct: 86  DEVHAAVAAAVERFGPIGILVNSAGRNG--------GGETADLDDALWADV--------- 128
Query: 122 KCLRTNYYGSKRMCEVLIPL--LQLSDLPRIVNVSSNMGK 159
             L TN  G  R+   ++    ++ +   RIVN++S  GK
Sbjct: 129 --LDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGK 166

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG      LA  G  V+ TA  E  G +A+        D+     L+V +P
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSES-GAQAISDYLG---DNGKGMALNVTNP 70
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            +I ++   +  +FG +DILVNNA I       D L   +K+ E   W++I         
Sbjct: 71  ESIEAVLKAITDEFGGVDILVNNAGI-----TRDNLLMRMKEEE---WSDI--------- 113
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
             + TN     R+ + ++  +      RI+NV S +G + N  Q
Sbjct: 114 --METNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ 155

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG      LA  G  V+ TA  E  G +A+        D+     L+V +P
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSES-GAQAISDYLG---DNGKGMALNVTNP 70
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            +I ++   +  +FG +DILVNNA I       D L   +K+ E   W++I         
Sbjct: 71  ESIEAVLKAITDEFGGVDILVNNAGI-----TRDNLLMRMKEEE---WSDI--------- 113
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
             + TN     R+ + ++  +      RI+NV S +G + N  Q
Sbjct: 114 --METNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ 155

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG      LA  G  V+ TA  E  G +A+        D+     L+V +P
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSES-GAQAISDYLG---DNGKGMALNVTNP 70
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            +I ++   +  +FG +DILVNNA I       D L   +K+ E   W++I         
Sbjct: 71  ESIEAVLKAITDEFGGVDILVNNAGI-----TRDNLLMRMKEEE---WSDI--------- 113
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
             + TN     R+ + ++  +      RI+NV S +G + N  Q
Sbjct: 114 --METNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ 155

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGA++GIG      LA  G  VV+  A +E++  E V+++K  G D++     DVA+
Sbjct: 7   ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA-DVAN 65
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              + ++       FG++DILVNNA             G  KD   ++  E      E  
Sbjct: 66  AEDVTNMVKQTVDVFGQVDILVNNA-------------GVTKDNLLMRMKE------EEW 106
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
           +  + TN  G     + +   +      RIVN++S +G   N  Q
Sbjct: 107 DTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQ 151

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG      LA  G  V+ TA  E  G +A+        D+     L+V +P
Sbjct: 15  ALVTGASRGIGKAIAELLAERGAKVIGTATSES-GAQAISDYLG---DNGKGMALNVTNP 70
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            +I ++   +  +FG +DILVNNA      +  D L   +K+ E   W++I         
Sbjct: 71  ESIEAVLKAITDEFGGVDILVNNA-----DITRDNLLMRMKEEE---WSDI--------- 113
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
             + TN     R+ + ++  +      RI+NV S +G + N  Q
Sbjct: 114 --METNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQ 155

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG E  R+L   G+ V + AR E+     +++L+ +G ++      DV   
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVRSV 87
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFG 89
             I +L   V  ++G +D+LVNNA   G
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAGRLG 115

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG E  R+L   G+ V + AR E+     +++L+ +G ++      DV   
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVRSV 83
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFG 89
             I +L   V  ++G +D+LVNNA   G
Sbjct: 84  PEIEALVAAVVERYGPVDVLVNNAGRLG 111

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG ++GIGY  V +LAS G  V   +R++K   + + + +  GF  V     D++  
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK-VEASVCDLSSR 69
Query: 62  ATIHSLADFVRSQF-GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           +    L + V + F GKL+ILVNNA I                   + + E    T E  
Sbjct: 70  SERQELMNTVANHFHGKLNILVNNAGI-------------------VIYKEAKDYTVEDY 110
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
              +  N+  +  +  +  P L+ S+   +V +SS  G L
Sbjct: 111 SLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL 150

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 22/160 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AV+TG   GIG     + A  G  + +   D     EA   +++ G   V+  + DV+ P
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADIAIA--DLVPAPEAEAAIRNLG-RRVLTVKCDVSQP 66
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +    V S FG+ DILVNNA I+ +                I ++E+   T+E  +
Sbjct: 67  GDVEAFGKQVISTFGRCDILVNNAGIYPL----------------IPFDEL---TFEQWK 107
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLK 161
           K    N      M +  +P ++ +   RI+N++S    LK
Sbjct: 108 KTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK 147

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG ++GIGY  V +LAS G  V   +R++K   + + + +  GF  V     D++  
Sbjct: 12  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK-VEASVCDLSSR 70
Query: 62  ATIHSLADFVRSQF-GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           +    L + V + F GKL+ILVNNA I                   + + E    T E  
Sbjct: 71  SERQELMNTVANHFHGKLNILVNNAGI-------------------VIYKEAKDYTVEDY 111
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
              +  N+  +  +  +  P L+ S+   +V +SS  G L
Sbjct: 112 SLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL 151

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 41/86 (47%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           +VTG  KGIG       A  G  V + AR  +       +L   G  +VI  +LDV+DP 
Sbjct: 45  LVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPG 104
Query: 63  TIHSLADFVRSQFGKLDILVNNAAIF 88
           +    A  V   FG LD++  NA IF
Sbjct: 105 SCADAARTVVDAFGALDVVCANAGIF 130

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG E  R+L   G+ V + AR E+     +++L+ +G ++      DV   
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVRSV 87
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFG 89
             I +L   V  ++G +D+LVNNA   G
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAGRPG 115

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG E  R+L   G+ V + AR E+     +++L+ +G ++      DV   
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVRSV 87
Query: 62  ATIHSLADFVRSQFGKLDILVNNAA 86
             I +L   V  ++G +D+LVNNA 
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAG 112

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG E  R+L   G+ V + AR E+     +++L+ +G ++      DV   
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVRSV 87
Query: 62  ATIHSLADFVRSQFGKLDILVNNA 85
             I +L   V  ++G +D+LVNNA
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNA 111

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA  GIG E  R+L   G+ V + AR E+     +++L+ +G ++      DV   
Sbjct: 9  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVRSV 67
Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
            I +L   V  ++G +D+LVNNA
Sbjct: 68 PEIEALVAAVVERYGPVDVLVNNA 91

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG E  R+L   G+ V + AR E+     +++L+ +G ++      DV   
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVRSV 83
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFG 89
             I +L   V  ++G +D+LVNNA   G
Sbjct: 84  PEIEALVAAVVERYGPVDVLVNNAGRPG 111

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG E  R+L   G+ V + AR E+     +++L+ +G ++      DV   
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVRSV 87
Query: 62  ATIHSLADFVRSQFGKLDILVNNA 85
             I +L   V  ++G +D+LVNNA
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNA 111

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG +KGIGY  V +LA  G  V   +R+EK   E +E  +  G + V     D+   
Sbjct: 24  ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN-VEGSVCDLLSR 82
Query: 62  ATIHSLADFVRSQF-GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
                L   V   F GKL+ILVNNA   GV +  +A     KD     +N I        
Sbjct: 83  TERDKLMQTVAHVFDGKLNILVNNA---GVVIHKEA-----KDFTEKDYNII-------- 126
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
              + TN+  +  + ++  PLL+ S    ++ +SS  G
Sbjct: 127 ---MGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAG 161

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG+  GIG    + LA  G  +VL    +     A+ ++   G  +V  H  D++D 
Sbjct: 7   ALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAV-HHPADLSDV 63
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A I +L      +FG +DILVNNA I  V+         V+      W++I+        
Sbjct: 64  AQIEALFALAEREFGGVDILVNNAGIQHVAP--------VEQFPLESWDKIIALN----- 110
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
             L   ++G++    + +P ++  +  RI+N++S  G + +T + A
Sbjct: 111 --LSAVFHGTR----LALPGMRARNWGRIINIASVHGLVGSTGKAA 150

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 31/168 (18%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG      LA  G  V+ TA  E  G +A+        D+     L+V +P
Sbjct: 12  ALVTGASRGIGKAIAELLAERGAKVIGTATSES-GAQAISDYLG---DNGKGXALNVTNP 67
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEI----VTPTY 117
            +I ++   +  +FG +DILVNNA I       D L    K+ E   W++I    +T  +
Sbjct: 68  ESIEAVLKAITDEFGGVDILVNNAGI-----TRDNLLXRXKEEE---WSDIXETNLTSIF 119
Query: 118 ELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
            L++  LR      KR               RI+NV S +G   N  Q
Sbjct: 120 RLSKAVLRGXX--KKRQG-------------RIINVGSVVGTXGNAGQ 152

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 30/172 (17%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT---ARDEKRGLEAVEKLKHSGFDSVIFHQLDV 58
           AV+TG+  GIG    R LA  G  +VL    A DE R +   +++      +V+ H  D 
Sbjct: 28  AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTV--TDEVAGLSSGTVLHHPADX 85
Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGE--PI-KWNEIVTP 115
             P+ I      V  +FG  DILVNNA +            FV+  E  P+ +W+ I+  
Sbjct: 86  TKPSEIADXXAXVADRFGGADILVNNAGV-----------QFVEKIEDFPVEQWDRIIA- 133
Query: 116 TYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
                      N   S       IP  +     RI+N++S  G + + ++ A
Sbjct: 134 ----------VNLSSSFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSA 175

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          ++TGA+ GIG    R+L   G  ++L AR + R +EA+         + +   LDV D  
Sbjct: 8  LITGASGGIGEGIARELGVAGAKILLGARRQAR-IEAIATEIRDAGGTALAQVLDVTDRH 66
Query: 63 TIHSLADFVRSQFGKLDILVNNAAIFGVS 91
          ++ + A      +G++D+LVNNA +  +S
Sbjct: 67 SVAAFAQAAVDTWGRIDVLVNNAGVMPLS 95

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA++GIG+E    LAS G  VV TA  +    +     K  GF +     L+++D 
Sbjct: 8  ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGL-VLNISDI 66
Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
           +I +    ++++   +DILVNNA I
Sbjct: 67 ESIQNFFAEIKAENLAIDILVNNAGI 92

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK-LKHSGFDSVIFHQLDVAD 60
           AVVTG+  GIG      LA+ G  +VL    +   +E V   L       V++   D++ 
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK 66
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              +  L D    Q G++DILVNNA I          +  ++D    KW+ I+       
Sbjct: 67  GEAVRGLVDNAVRQMGRIDILVNNAGI--------QHTALIEDFPTEKWDAILALN---- 114
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
              L   ++G+       +P ++     RI+N++S  G
Sbjct: 115 ---LSAVFHGTA----AALPHMKKQGFGRIINIASAHG 145

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK-LKHSGFDSVIFHQLDVAD 60
           AVVTG+  GIG      LA+ G  +VL    +   +E V   L       V++   D++ 
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK 66
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              +  L D    Q G++DILVNNA I          +  ++D    KW+ I+       
Sbjct: 67  GEAVRGLVDNAVRQMGRIDILVNNAGI--------QHTALIEDFPTEKWDAILALN---- 114
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
              L   ++G+       +P ++     RI+N++S  G
Sbjct: 115 ---LSAVFHGTA----AALPHMKKQGFGRIINIASAHG 145

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK-LKHSGFDSVIFHQLDVAD 60
           AVVTG+  GIG      LA+ G  +VL    +   +E V   L       V++   D++ 
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK 66
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              +  L D    Q G++DILVNNA I          +  ++D    KW+ I+       
Sbjct: 67  GEAVRGLVDNAVRQMGRIDILVNNAGI--------QHTALIEDFPTEKWDAILALN---- 114
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
              L   ++G+       +P ++     RI+N++S  G
Sbjct: 115 ---LSAVFHGTA----AALPHMKKQGFGRIINIASAHG 145

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 22/156 (14%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           +VTGA  G G    R+    G  V+ T R ++R    +++LK    D++   QLDV + A
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQER----LQELKDELGDNLYIAQLDVRNRA 59
Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEK 122
            I  +   + +++  +DILVNNA             G     EP         + E  E 
Sbjct: 60  AIEEMLASLPAEWCNIDILVNNA-------------GLALGMEPAH-----KASVEDWET 101
Query: 123 CLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
            + TN  G   M   ++P +   +   I+N+ S  G
Sbjct: 102 MIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG 137

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TGA  GIG  T   LA++G+ V    R      E  +++  +G  ++   + DV+D 
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIAL-EADVSDE 89
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
               +    +  +FG LDI+V NA I GV          + D +P +W+E +        
Sbjct: 90  LQXRNAVRDLVLKFGHLDIVVANAGINGVWAP-------IDDLKPFEWDETIA------- 135
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQG 166
                N  G+     + +P L+      IV VSS  G    T  G
Sbjct: 136 ----VNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPG 176

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLDVAD 60
           A+VTGA+ GIG    R L   G+ VV  AR      E   + K +G+  ++I ++ D+++
Sbjct: 35  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAI 87
              I S+   +RSQ   +DI +NNA +
Sbjct: 95  EEDILSMFSAIRSQHSGVDICINNAGL 121

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TGA  GIG E     A+ G  VV++  +       V++++  G  +    + D+   
Sbjct: 14 AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFAC-RCDITSE 72
Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
            + +LADF  S+ GK+DILVNNA
Sbjct: 73 QELSALADFAISKLGKVDILVNNA 96

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 23/171 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD--SVIFHQLDVA 59
           A+VTG  + IG   V  LA  G  V++   DE    +AVE L+  G D  SV+   +DV 
Sbjct: 16  AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVV---MDVT 72
Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           +  ++ +    V  Q G++DILV  A I    V  + ++    DG+ +K  +I       
Sbjct: 73  NTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMT----DGQWLKQVDI------- 121
Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
                  N  G  R C+ +  ++       IV + S  G + N  Q    Y
Sbjct: 122 -------NLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAY 165

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 26/168 (15%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           ++TGA++GIG  T R L + G  V L ARDEKR L+A+     +  +  +    DV +  
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDEKR-LQALA----AELEGALPLPGDVREEG 63
Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEK 122
                   +   FG+L  LVNNA +           G +K   P+  +E+    + L   
Sbjct: 64  DWARAVAAMEEAFGELSALVNNAGV-----------GVMK---PV--HELTLEEWRL--- 104
Query: 123 CLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
            L TN  G+       +P L       IVNV S  G  KN ++G   Y
Sbjct: 105 VLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAG--KNPFKGGAAY 150

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 23/168 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG    R   + G IV L    E +  E    L   G D  +F   +++D 
Sbjct: 30  ALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSA-NLSDR 85
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            +I  LA+    +   +DILVNNA   G++ DG     FV+  +   W+++         
Sbjct: 86  KSIKQLAEVAEREMEGIDILVNNA---GITRDGL----FVRMQDQ-DWDDV--------- 128
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
             L  N   +  +   LI  +      RI+N++S +G + N  Q   C
Sbjct: 129 --LAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYC 174

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 2  AVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
          A+VTG  +GIG     +LA++G  I V    + E++  E + KL  +     +F  LDV 
Sbjct: 5  AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETI-KLIEAADQKAVFVGLDVT 63
Query: 60 DPATIHSLADFVRSQFGKLDILVNNAAI 87
          D A   S  D    + G  D+LVNNA I
Sbjct: 64 DKANFDSAIDEAAEKLGGFDVLVNNAGI 91

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA +GIG E  + LA +   V+  +R +K     V+++K  G++S  +   DV+  
Sbjct: 47  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG-DVSKK 105
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I  + + + ++   +DILVNNA I       D L   +K+ E   W           E
Sbjct: 106 EEISEVINKILTEHKNVDILVNNAGI-----TRDNLFLRMKNDE---W-----------E 146
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
             LRTN      + + +   +  +   RI+N+SS +G   N  Q
Sbjct: 147 DVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ 190

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A +TG   GIG+        +G   V+ +R   R L A  KL  +     +   +DV  P
Sbjct: 30  AFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAP 89
Query: 62  ATIHSLADFVRSQFGKLDILVNNAA 86
             + +  D    +FG++DIL+N AA
Sbjct: 90  PAVMAAVDQALKEFGRIDILINCAA 114

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG     +L   G +V+ TA       +  E LK +G +      LDV+  
Sbjct: 30  ALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGL-VLDVSSD 88
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            ++ +  + ++   G+  I+VNNA I       D L   +KD E   W ++V        
Sbjct: 89  ESVAATLEHIQQHLGQPLIVVNNAGI-----TRDNLLVRMKDDE---WFDVVN------- 133
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
               TN     R+ + ++  +  +   RI+N+ S +G + N  Q
Sbjct: 134 ----TNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQ 173

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 16/154 (10%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA+ G G     +  + G  V       +   E      H+  D V+  + DVAD 
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADE 64
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +++       QFG +D+LVNNA I G S  G      V    P+          E  +
Sbjct: 65  GDVNAAIAATMEQFGAIDVLVNNAGITGNSEAG------VLHTTPV----------EQFD 108
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           K +  N  G    C  ++P + L     IVN++S
Sbjct: 109 KVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIAS 142

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  G+G    R L + G IV L    E++  E   +L     + +     +++D 
Sbjct: 10  ALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELG----ERIFVFPANLSDR 65
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +L      + G +DILVNNA   G++ DG     FV+  +   W+ ++T       
Sbjct: 66  EAVKALGQKAEEEMGGVDILVNNA---GITRDGL----FVRMSDE-DWDAVLTVNL---- 113
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
               T+ +   R  E+  P+++  +  RI+N++S +G   N  Q   C
Sbjct: 114 ----TSVFNLTR--ELTHPMMRRRN-GRIINITSIVGVTGNPGQANYC 154

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  G+G    R L + G IV L    E++  E   +L     + +     +++D 
Sbjct: 13  ALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELG----ERIFVFPANLSDR 68
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +L      + G +DILVNNA   G++ DG     FV+  +   W+ ++T       
Sbjct: 69  EAVKALGQKAEEEMGGVDILVNNA---GITRDGL----FVRMSDE-DWDAVLTVNL---- 116
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
               T+ +   R  E+  P+++  +  RI+N++S +G   N  Q   C
Sbjct: 117 ----TSVFNLTR--ELTHPMMRRRN-GRIINITSIVGVTGNPGQANYC 157

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 26/171 (15%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           V+TGA+ GIG    R+ +  G  ++L AR        VE+LK     + +  Q+DV D  
Sbjct: 20  VITGASSGIGEAIARRFSEEGHPLLLLARR-------VERLKALNLPNTLCAQVDVTDKY 72
Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEK 122
           T  +        +G  D +VNNA +         L G +   E  +W           ++
Sbjct: 73  TFDTAITRAEKIYGPADAIVNNAGMM--------LLGQIDTQEANEW-----------QR 113
Query: 123 CLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICYLTF 173
               N  G     + ++  ++  +   I+N+SS  GK       A C   F
Sbjct: 114 MFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKF 164

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD--SVIFHQLDVA 59
          A+VTGA +GIG      L   G  V L   + + G++    L H  F+    +F Q DVA
Sbjct: 10 ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAAL-HEQFEPQKTLFIQCDVA 68
Query: 60 DPATIHSLADFVRSQFGKLDILVNNAAI 87
          D   +      V   FG+LDILVNNA +
Sbjct: 69 DQQQLRDTFRKVVDHFGRLDILVNNAGV 96

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 31/169 (18%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-----------ARDEKRGLEAVEKLKHSGFDS 50
           A +TGA +G G     +LA +G  +V             A+     L+   +L       
Sbjct: 49  AFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR 108
Query: 51  VIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWN 110
           +I  Q DV D A++ ++ D   ++FG +DILV+N    G+S  G+ +S  + D +   W+
Sbjct: 109 IIARQADVRDLASLQAVVDEALAEFGHIDILVSN---VGISNQGEVVS--LTDQQ---WS 160
Query: 111 EIVTPTYELAEKCLRTNYYGSKRMCEVLIP-LLQLSDLPRIVNVSSNMG 158
           +I           L+TN  G+   C  ++P +++      ++ VSS +G
Sbjct: 161 DI-----------LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVG 198

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 20/158 (12%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFH-QLDVAD 60
           AVVTG+  GIG     +LA  G  VV+    +   +E       S F    ++   D++D
Sbjct: 7   AVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNADLSD 66
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
                          G LDILVNNA I   +     +  F  D    KWN I+       
Sbjct: 67  AQATRDFIAKAAEALGGLDILVNNAGIQHTA----PIEEFPVD----KWNAIIALN---- 114
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
              L   ++G+       +P++Q     RI+N++S  G
Sbjct: 115 ---LSAVFHGTA----AALPIMQKQGWGRIINIASAHG 145

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 34/180 (18%)
Query: 4   VTGANKGIGYETVRQLASNGIIVVLTARDEK----------RGLEAVEKLKHSGFDSVIF 53
           +TGA++GIG     + A +G  +V+ A+  +             E +E +       ++ 
Sbjct: 50  ITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIV- 108
Query: 54  HQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIV 113
              DV D   I +  +    +FG +DILVNNA+   ++                  N + 
Sbjct: 109 ---DVRDEQQISAAVEKAIKKFGGIDILVNNASAISLT------------------NTLD 147
Query: 114 TPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICYLTF 173
           TPT  L +  +  N  G+    +  IP L+ S +  I+N+S  +  L   W    C  T 
Sbjct: 148 TPTKRL-DLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPL-NLNPVWFKQHCAYTI 205

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           +VTGA  GIG    ++ A N  IVV     E R  + V++L+  G + V+  + DV+   
Sbjct: 11  IVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE-VLGVKADVSKKK 69
Query: 63  TIHSLADFVRSQF---GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
            +    +FVR  F    ++D+L NNA I     DG                  VTP  E+
Sbjct: 70  DVE---EFVRRTFETYSRIDVLCNNAGIM----DG------------------VTPVAEV 104
Query: 120 A----EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           +    E+ L  N Y +      +IP++       IVN +S  G ++  + GA
Sbjct: 105 SDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG-IRGGFAGA 155

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQL-DVAD 60
          AVVTG + GIG  TV  L   G  V   ARD +R   A   L+     + +F  + DV D
Sbjct: 11 AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD 70
Query: 61 PATIHSLADFVRSQFGKLDILVNNA 85
             + + A+      G   ILVNNA
Sbjct: 71 ALQVRAFAEACERTLGCASILVNNA 95

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          +VTG  KGIG+  V + A  G ++   AR+E    E + K +  GF  V     D +   
Sbjct: 18 LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ-VTGSVCDASLRP 76
Query: 63 TIHSLADFVRSQF-GKLDILVNN 84
              L   V S F GKLDIL+NN
Sbjct: 77 EREKLMQTVSSMFGGKLDILINN 99

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 38/86 (44%)
Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          VVTG  KGIG       A  G  V +  R        V  L   G   VI  Q DV+D A
Sbjct: 14 VVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRA 73
Query: 63 TIHSLADFVRSQFGKLDILVNNAAIF 88
             +LA     +FG +D++  NA +F
Sbjct: 74 QCDALAGRAVEEFGGIDVVCANAGVF 99

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 30/154 (19%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG + GIG   V  L   G  VV  + DEK  +   +  K           +DV + 
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK-----------IDVTNE 65
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +    +    ++G++DILVNNA I   S              P+     +TPT E+  
Sbjct: 66  EEVKEAVEKTTKKYGRIDILVNNAGIEQYS--------------PLH----LTPT-EIWR 106
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           + +  N  GS  M +  IP++       I+N++S
Sbjct: 107 RIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIAS 140

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVE-KLKHSGFDSVIFHQLDVADP 61
           ++TGA+KGIG E  + LAS G+ V +  R      +A++ +L+  G+ + +      ++ 
Sbjct: 33  LITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASES 92
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I ++   V+S  G L  LVNNA             G V+D   IK        + + +
Sbjct: 93  DFIEAIQTIVQSD-GGLSYLVNNA-------------GVVRDKLAIKMK--TEDFHHVID 136
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
             L + + G    C   + ++  S    +VNV+S +G+  N  Q
Sbjct: 137 NNLTSAFIG----CREALKVMSKSRFGSVVNVASIIGERGNMGQ 176

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSG--FDSVIFHQLDV 58
          A++TGA++GIG      LA++G  VVL AR  K+ LE V +++  S       I   LD+
Sbjct: 10 AIITGASQGIGAVIAAGLATDGYRVVLIAR-SKQNLEKVHDEIXRSNKHVQEPIVLPLDI 68
Query: 59 ADPATIHSLADFVRSQFGKLDILVNNAAIF 88
           D     +    +  ++G +DILVN AA F
Sbjct: 69 TDCTKADTEIKDIHQKYGAVDILVNAAAXF 98

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQL--DVAD 60
           ++TG++ GIG       A  G  V +T R+E R  E  +++  +G  +   + +  DV +
Sbjct: 30  IITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 89
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
            +    + +   ++FGK+DILVNNA         +   G     +P+          EL 
Sbjct: 90  ASGQDDIINTTLAKFGKIDILVNNAG-------ANLADGTANTDQPV----------ELY 132
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           +K  + N+     M +     L +     IVNVSS
Sbjct: 133 QKTFKLNFQAVIEMTQKTKEHL-IKTKGEIVNVSS 166

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 3   VVTGANKGIGYETVRQL--ASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFH--QLDV 58
           ++TGA+ GIG  T  +   ASNG + ++ A      LE ++K     F +   H  QLD+
Sbjct: 37  LITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDI 96
Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
                I    + +  +F  +DILVNNA   G ++  D            +  +I T   E
Sbjct: 97  TQAEKIKPFIENLPQEFKDIDILVNNA---GKALGSD------------RVGQIAT---E 138
Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
             +    TN      + + ++P+ Q  +   IVN+ S  G+
Sbjct: 139 DIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR 179

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 31/162 (19%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           +VTGA+ G G        + G  V+ TAR      EA++ L  +  D      LDV D  
Sbjct: 9   LVTGASSGFGRAIAEAAVAAGDTVIGTARR----TEALDDLVAAYPDRAEAISLDVTDGE 64
Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEK 122
            I  +A  V +++G++D+LVNNA                           V    E  E+
Sbjct: 65  RIDVVAADVLARYGRVDVLVNNAG-----------------------RTQVGAFEETTER 101
Query: 123 CLRT----NYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
            LR     + +G  R+   L+P  +      +VN+SS  G+L
Sbjct: 102 ELRDLFELHVFGPARLTRALLPQXRERGSGSVVNISSFGGQL 143

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 27/162 (16%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG ++GIG    + L   G  V + ARD +   +   +L   G    I    D++  
Sbjct: 32  ALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAI--PADLSSE 89
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAI-FGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           A    LA  +     +LDILVNNA   +G +++   +SG+                    
Sbjct: 90  AGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGW-------------------- 129
Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLS----DLPRIVNVSSNMG 158
           EK ++ N        + L+PLL+ S    +  R++N+ S  G
Sbjct: 130 EKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAG 171

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          +VTG   GIG +        G  V     DEKR  +  ++  +     + +   DVADP 
Sbjct: 6  IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPN-----LFYFHGDVADPL 60
Query: 63 TIHSLADFVRSQFGKLDILVNNAA 86
          T+    ++   +  ++D+LVNNA 
Sbjct: 61 TLKKFVEYAMEKLQRIDVLVNNAC 84

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TGA  G G    ++ A  G  VV+  RD+       E++     D+ +    D++  
Sbjct: 12 ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKA----GAERVAGEIGDAALAVAADISKE 67
Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
          A + +  +   S+FGK+DILVNNA I
Sbjct: 68 ADVDAAVEAALSKFGKVDILVNNAGI 93

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQL--DVA 59
          A++TG++ GIG  T    A  G  V +T R  +R  E  +++  +G      + +  DV 
Sbjct: 9  AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68
Query: 60 DPATIHSLADFVRSQFGKLDILVNNA 85
            A    +      +FGKLDILVNNA
Sbjct: 69 TDAGQDEILSTTLGKFGKLDILVNNA 94

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTG+  GIG      L + G  V++  R E+   E +++++    D+++  Q  VAD 
Sbjct: 13 ALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAIL--QPVVADL 70
Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIF 88
           T     D +  ++ K+DIL+NN  IF
Sbjct: 71 GTEQGCQDVIE-KYPKVDILINNLGIF 96

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VT +  GIG+   R+LA +G  VV+++R ++   +AV  L+  G  SV      V   
Sbjct: 18  ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGL-SVTGTVCHVGKA 76
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                L        G +DILV+NAA+                  P  +  I+  T E+ +
Sbjct: 77  EDRERLVATAVKLHGGIDILVSNAAV-----------------NPF-FGSIMDVTEEVWD 118
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           K L  N      M + ++P ++      +V VSS
Sbjct: 119 KTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSS 152

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 4   VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
           +TGA  G G    R+ A  G  +VLT R E+R L+A+   + S    V+   LDV D A 
Sbjct: 26  ITGATSGFGEACARRFAEAGWSLVLTGRREER-LQALAG-ELSAKTRVLPLTLDVRDRAA 83
Query: 64  IHSLADFVRSQFGKLDILVNNAAI 87
             +  D +  +F  L  L+NNA +
Sbjct: 84  XSAAVDNLPEEFATLRGLINNAGL 107

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          ++TG++ GIG  T    A  G  V +T R  +R  E  + +  SG      + + VAD  
Sbjct: 10 IITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV-VADVT 68
Query: 63 TIHSLADFVRS---QFGKLDILVNNA 85
          T       + S   QFGK+D+LVNNA
Sbjct: 69 TEDGQDQIINSTLKQFGKIDVLVNNA 94

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVAD 60
          A VTG   G+G   VRQL + G  V +    +    +A+  L+  G    V+  QLDVA 
Sbjct: 11 AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70
Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
                 AD V ++FG + IL NNA +
Sbjct: 71 REGFKMAADEVEARFGPVSILCNNAGV 97

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGA +GIG E   +L   G  V++  A   +   E V  +K +G D+          
Sbjct: 32  ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK------ 85
Query: 61  PATIHSLADFVR------SQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT 114
            A +  + D VR        FGKLDI+ +N+ +           G VKD  P +++ + T
Sbjct: 86  -ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSF--------GHVKDVTPEEFDRVFT 136

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 22/120 (18%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGA +GIG E   +L   G  V++  A   +   E V  +K +G D+          
Sbjct: 32  ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK------ 85
Query: 61  PATIHSLADFVR------SQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT 114
            A +  + D VR        FGKLDI+ +N+ +           G VKD  P +++ + T
Sbjct: 86  -ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSF--------GHVKDVTPEEFDRVFT 136

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TG   GIG     +    G  V++T R    G +A + +     D + F Q D +D 
Sbjct: 9  AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDSSDE 66
Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
               L D     FG +  LVNNA I
Sbjct: 67 DGWTKLFDATEKAFGPVSTLVNNAGI 92

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG   G+G E V+ L   G  V  +  +E  G +   +L     +  +F + DV+  
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----ERSMFVRHDVSSE 64
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKD 103
           A    +   V+ + G L++LVNNA I    + GD  +G ++D
Sbjct: 65  ADWTLVMAAVQRRLGTLNVLVNNAGIL---LPGDMETGRLED 103

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS-VIFHQLDVAD 60
           A+VTG  +GIG    R LA++G  + +T   +  G+  V   + SG  + VIF + D+AD
Sbjct: 32  AIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIA-ELSGLGARVIFLRADLAD 90
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVD 93
            ++  +  D V ++FG++D LVNNA I  +  D
Sbjct: 91  LSSHQATVDAVVAEFGRIDCLVNNAGIASIVRD 123

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           VVTGA++GIG      L   G  V++  AR  K   E  ++++  G  ++ F   DV+  
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGG-DVSKE 63
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A + ++       +G +D++VNNA I       D L   +K  +   W+E++        
Sbjct: 64  ADVEAMMKTAIDAWGTIDVVVNNAGI-----TRDTLLIRMKKSQ---WDEVID------- 108
Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
                N  G     +    ++      RI+N++S +G + N  Q
Sbjct: 109 ----LNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ 148

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 20/153 (13%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           V++G    +G    R+ A  G  +VL AR  +R LE V K         +    D+ D A
Sbjct: 15  VISGVGPALGTTLARRCAEQGADLVLAARTVER-LEDVAKQVTDTGRRALSVGTDITDDA 73
Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEK 122
            +  L D     +G++D+++NNA  F V                         T+E    
Sbjct: 74  QVAHLVDETMKAYGRVDVVINNA--FRVP----------------SMKPFANTTFEHMRD 115
Query: 123 CLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
            +    +G+ R+ +   P L+ S    +VNV+S
Sbjct: 116 AIELTVFGALRLIQGFTPALEESK-GAVVNVNS 147

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           VVTGA++GIG     QL   G  V +T R     L  V +   S     +    D +  
Sbjct: 8  CVVTGASRGIGRGIALQLCKAGATVYITGRHLDT-LRVVAQEAQSLGGQCVPVVCDSSQE 66
Query: 62 ATIHSLADFV-RSQFGKLDILVNNA 85
          + + SL + V R Q G+LD+LVNNA
Sbjct: 67 SEVRSLFEQVDREQQGRLDVLVNNA 91

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 23/153 (15%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           +VTG   GIG  T    A NG  VV+   +E   +    ++    F      ++DV+   
Sbjct: 31  IVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGV----RVDVSSAK 86
Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEK 122
              S  +   +++G++D+LVNNA             GF   G       +VT   E  ++
Sbjct: 87  DAESXVEKTTAKWGRVDVLVNNA-------------GFGTTG------NVVTIPEETWDR 127
Query: 123 CLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
               N  G     + +IP+ + +    I+N +S
Sbjct: 128 IXSVNVKGIFLCSKYVIPVXRRNGGGSIINTTS 160

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TG   GIG     +    G  V++T R    G +A + +     D + F Q D +D 
Sbjct: 9  AIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTP--DQIQFFQHDSSDE 66
Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
               L D     FG +  LVNNA I
Sbjct: 67 DGWTKLFDATEKAFGPVSTLVNNAGI 92

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 20/130 (15%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVADP 61
           +VTG ++GIG    R  A  G  V +     +   +AV   +  SG ++V     DV + 
Sbjct: 30  LVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG-DVGNA 88
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A I +    V  QFG+LD LVNNA I    VD            P + +E    + E  E
Sbjct: 89  ADIAAXFSAVDRQFGRLDGLVNNAGI----VD-----------YPQRVDEX---SVERIE 130
Query: 122 KCLRTNYYGS 131
           + LR N  GS
Sbjct: 131 RXLRVNVTGS 140

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA +GIG     +L  +G  V +   ++        ++  +G  +V   ++DV+D 
Sbjct: 5  ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAV-KVDVSDR 63
Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            + +  +  R   G  D++VNNA +
Sbjct: 64 DQVFAAVEQARKTLGGFDVIVNNAGV 89

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 32/178 (17%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL------------EAVEKLKHSGFD 49
           A++TG  +G+G      LA  G  + +  R E   +            E V  ++ +G  
Sbjct: 13  ALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG-R 71
Query: 50  SVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKW 109
             I  ++DV D A + S         G +DI + NA I  ++         + + E  +W
Sbjct: 72  RCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIA--------LLPEVESAQW 123
Query: 110 NEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           +E++            TN  G+      + P +   +  RIV VSS +G   N  Q +
Sbjct: 124 DEVI-----------GTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQAS 170

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 24/176 (13%)
Query: 3   VVTGANKGIGYE-TVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           V+TG + G+G    VR       +V+    +E+  L+A ++++ +G  ++I  Q DV   
Sbjct: 19  VITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIV-QGDVTKE 77
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAI-------------FGVSVDGDALSGFVKDGEPIK 108
             + +L      +FG LD+++NNA +             +   +D +    F+   E IK
Sbjct: 78  EDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIK 137
Query: 109 W---NEI------VTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           +   N+I      ++  +E+    L  +Y  SK   +++   L L   P+ + V++
Sbjct: 138 YFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNN 193

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 24/176 (13%)
Query: 3   VVTGANKGIGYE-TVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           V+TG + G+G    VR       +V+    +E+  L+A ++++ +G  ++I  Q DV   
Sbjct: 19  VITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIV-QGDVTKE 77
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAI-------------FGVSVDGDALSGFVKDGEPIK 108
             + +L      +FG LD+++NNA +             +   +D +    F+   E IK
Sbjct: 78  EDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIK 137
Query: 109 W---NEI------VTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           +   N+I      ++  +E+    L  +Y  SK   +++   L L   P+ + V++
Sbjct: 138 YFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNN 193

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 24/176 (13%)
Query: 3   VVTGANKGIGYE-TVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           V+TG + G+G    VR       +V+    +E+  L+A ++++ +G  ++I  Q DV   
Sbjct: 19  VITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIV-QGDVTKE 77
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAI-------------FGVSVDGDALSGFVKDGEPIK 108
             + +L      +FG LD+++NNA +             +   +D +    F+   E IK
Sbjct: 78  EDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIK 137
Query: 109 W---NEI------VTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           +   N+I      ++  +E+    L  +Y  SK   +++   L L   P+ + V++
Sbjct: 138 YFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNN 193

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VT +  GIG    R+LA +G  VV+++R ++     V  L+  G  SV      V   
Sbjct: 17  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGKA 75
Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                L     +  G +DILV+NAA+                  P  +  I+  T E+ +
Sbjct: 76  EDRERLVAMAVNLHGGVDILVSNAAV-----------------NPF-FGNIIDATEEVWD 117
Query: 122 KCLRTNYYGSKRMCEVLIPLLQ 143
           K L  N   +  M + ++P ++
Sbjct: 118 KILHVNVKATVLMTKAVVPEME 139

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEK---RGLEAVEKLKHSGFDSVIFHQLDV 58
           A+VTGA+ GIG+      A  G  +V    +++   RG+ A    K +G ++  +   DV
Sbjct: 37  ALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAA---YKAAGINAHGY-VCDV 92
Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIF 88
            D   I ++   + S+ G +DILVNNA I 
Sbjct: 93  TDEDGIQAMVAQIESEVGIIDILVNNAGII 122

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQL--DVA 59
           AVVTG   GIG  T  + A  G  +VL+  D+    +AV  L+  GFD+   H +  DV 
Sbjct: 34  AVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDA---HGVVCDVR 90
Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAI 87
               +  LAD      G +D++ +NA I
Sbjct: 91  HLDEMVRLADEAFRLLGGVDVVFSNAGI 118

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA+ GIG       A  G  VV+TAR+     E  +++             DV D 
Sbjct: 11 AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-GGEAAALAGDVGDE 69
Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFGV 90
          A   +L +    +FG LD   NNA   G 
Sbjct: 70 ALHEALVELAVRRFGGLDTAFNNAGALGA 98

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFH-QLDVAD 60
           A++TGA KGIG +  R  A+ G  +VL+ RD    L+A  +     F + +    +D+A+
Sbjct: 23  ALITGATKGIGADIARAFAAAGARLVLSGRDVSE-LDAARRALGEQFGTDVHTVAIDLAE 81
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAI 87
           P     LA      FG LD+LVNNA I
Sbjct: 82  PDAPAELARRAAEAFGGLDVLVNNAGI 108

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 2   AVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A VTG   GIG    ++L  +G  VV     +  R ++ +E  K  GFD     + +V D
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFD-FYASEGNVGD 74
Query: 61  PATIHSLADFVRSQFGKLDILVNNAAI 87
             +     D V+++ G++D+LVNNA I
Sbjct: 75  WDSTKQAFDKVKAEVGEIDVLVNNAGI 101

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS--VIFHQLDVA 59
          A+VTG+ +G+G+     LA+ G  V+L         E+V+ L   G+D+  V F   DV 
Sbjct: 12 ALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF---DVT 68
Query: 60 DPATIHSLADFVRSQFGKLDILVNNAAI 87
          D   I +    + ++   +DIL+NNA I
Sbjct: 69 DELAIEAAFSKLDAEGIHVDILINNAGI 96

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 40/87 (45%)
Query: 3   VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           V   A  GIG  T R+    G  VV++   E+R  E  ++L   G   V     DV    
Sbjct: 27  VTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTE 86
Query: 63  TIHSLADFVRSQFGKLDILVNNAAIFG 89
            + +L      + G+LD+LVNNA + G
Sbjct: 87  AVDALITQTVEKAGRLDVLVNNAGLGG 113

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	174
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-62
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-61
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	7e-36
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-31
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-31
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-30
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-29
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-29
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-28
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	3e-28
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	4e-28
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	4e-28
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-27
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-27
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-27
1xq1_A	266	Putative tropinone reducatse; structural genomics,	3e-27
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	4e-27
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	6e-27
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-26
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	3e-26
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-26
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-26
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	5e-26
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	6e-26
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	7e-26
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-26
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	8e-26
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	8e-26
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-25
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	2e-25
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-25
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-25
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-25
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	3e-25
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-25
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	4e-25
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	4e-25
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	7e-25
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	8e-25
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-24
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-24
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-24
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-24
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-24
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-24
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-24
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-24
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-24
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-24
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-24
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	2e-24
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-24
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-24
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-24
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	4e-24
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	5e-24
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-24
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	6e-24
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	6e-24
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	7e-24
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-23
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-23
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-23
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-23
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-23
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-23
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	1e-23
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-23
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	2e-23
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-23
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-23
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	3e-23
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	3e-23
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-23
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	3e-23
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	4e-23
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	4e-23
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	5e-23
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	5e-23
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	8e-23
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	9e-23
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	9e-23
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-22
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-22
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-22
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-22
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	1e-22
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-22
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-22
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	3e-22
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-22
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	3e-22
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	3e-22
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-22
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	4e-22
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	4e-22
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	5e-22
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	5e-22
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	5e-22
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	6e-22
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	6e-22
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	7e-22
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	7e-22
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-22
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	8e-22
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	8e-22
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	8e-22
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	9e-22
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-21
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-21
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-21
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-21
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-21
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-21
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-21
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-21
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-21
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-21
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-21
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-21
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	3e-21
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	3e-21
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	3e-21
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-21
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-21
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-21
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	4e-21
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	4e-21
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	4e-21
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	4e-21
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	5e-21
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	6e-21
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	7e-21
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-20
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-20
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-20
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-20
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-20
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-20
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-20
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-20
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	3e-20
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-20
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	3e-20
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	3e-20
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	5e-20
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	6e-20
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-20
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-19
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	1e-19
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-19
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-19
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-19
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-19
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-19
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	3e-19
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	9e-19
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-18
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-18
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-18
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-18
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	6e-18
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	7e-18
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-17
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-17
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	3e-17
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	7e-16
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-15
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	4e-15
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	4e-15
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	5e-15
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	5e-15
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	6e-15
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	9e-15
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-14
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	6e-14
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-13
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-13
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	4e-13
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	4e-13
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	5e-13
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	8e-13
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	6e-11
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-10
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	5e-09
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	6e-06
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	9e-09
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	2e-08
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	1e-07
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	1e-07
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	2e-07
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	3e-07
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	3e-07
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	4e-07
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	4e-07
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	4e-07
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	5e-07
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	6e-07
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	6e-06
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	2e-05
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	4e-04
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	6e-04
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	7e-04

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  194 bits (493), Expect = 2e-62
 Identities = 101/176 (57%), Positives = 124/176 (70%), Gaps = 12/176 (6%)

Query: 1   YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
            AVVTG NKGIG+E  +QL+SNGI+VVLT RD  +G EAVEKLK+S  ++V+FHQLDV D
Sbjct: 14  CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD 73

Query: 61  P-ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKD-----------GEPIK 108
           P AT+ SLADF+++ FGKLDILVNNA + G SVD D     + D            E  +
Sbjct: 74  PIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPE 133

Query: 109 WNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTW 164
             E+++ TYELAE+CL+ NY G K + EVLIPLLQLSD PRIVNVSS+ G LK   
Sbjct: 134 AQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVS 189

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  191 bits (486), Expect = 1e-61
 Identities = 65/163 (39%), Positives = 88/163 (53%), Gaps = 23/163 (14%)

Query: 1   YAVVTGANKGIGYETVRQLAS-NGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+  G  S  FHQLD+ 
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDID 64

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           D  +I +L DF+R ++G LD+LVNNA I     D                    TP +  
Sbjct: 65  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVAD-------------------PTPFHIQ 105

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
           AE  ++TN++G++ +C  L+PL++     R+VNVSS M     
Sbjct: 106 AEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRAL 146

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  124 bits (313), Expect = 7e-36
 Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 37/172 (21%)

Query: 2   AVVTGANKGIGYETVRQLASNGII--VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            VVTGAN+GIG   V+QL  +  I  ++ TARD ++  E  + +K S    V    L V 
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-KSIKDSR---VHVLPLTVT 61

Query: 60  DPATIHSLADFVRSQFG--KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTY 117
              ++ +    V    G   L +L+NNA +                     +     P  
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLL------------------SYGTNTEPNR 103

Query: 118 ELAEKCLRTNYYGSKRMCEVLIPLLQLSDL-----------PRIVNVSSNMG 158
            +  + L  N      + + L+PLL+ +               ++ +SS +G
Sbjct: 104 AVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  112 bits (283), Expect = 2e-31
 Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 20/168 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD--SVIFHQLDVA 59
            +VTGA +GIG    R  A++G  VVL  R E    E  +++K +G     +I   L+ A
Sbjct: 17  ILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENA 76

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
                  LA  V  +FG+LD L++NA+I G           ++      + ++       
Sbjct: 77  TAQQYRELAARVEHEFGRLDGLLHNASIIGP-------RTPLEQLPDEDFMQV------- 122

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
               +  N   +  +   L+PLL+ S+   I   SS++G+      GA
Sbjct: 123 ----MHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGA 166

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  112 bits (282), Expect = 3e-31
 Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 36/173 (20%)

Query: 2   AVVTGANKGIGYETVRQLAS---NGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDV 58
            ++TG N+G+G   V+ L +       +  T R+ ++  E  +  K+    ++   ++D+
Sbjct: 24  ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHS--NIHILEIDL 81

Query: 59  ADPATIHSLADFVRSQFG--KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPT 116
            +      L   +        L++L NNA I                    K   I    
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAP------------------KSARITAVR 123

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP-----------RIVNVSSNMG 158
            +     L+TN      + +  +PLL+ +               I+N+SS +G
Sbjct: 124 SQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  110 bits (277), Expect = 1e-30
 Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS--VIFHQLDVA 59
            +VTGA+ GIG E     A  G  V+L  R+E++  +    +              L   
Sbjct: 15  ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTC 74

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
                  LA  +   + +LD +++NA + G           + +  P  W ++       
Sbjct: 75  TSENCQQLAQRIAVNYPRLDGVLHNAGLLGD-------VCPMSEQNPQVWQDV------- 120

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
               ++ N   +  + + L+PLL  SD   +V  SS++G+      GA
Sbjct: 121 ----MQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGA 164

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  108 bits (272), Expect = 2e-29
 Identities = 38/159 (23%), Positives = 59/159 (37%), Gaps = 20/159 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTGA+KGIG E    LA  G  VV+TAR ++   + V      G  S  +    + D 
Sbjct: 31  VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 90

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                         G LD+L+ N      +   +                +         
Sbjct: 91  TFAEQFVAQAGKLMGGLDMLILNH---ITNTSLN----------------LFHDDIHHVR 131

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
           K +  N+     +    +P+L+ S+   IV VSS  GK+
Sbjct: 132 KSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKV 169

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  108 bits (271), Expect = 2e-29
 Identities = 42/167 (25%), Positives = 57/167 (34%), Gaps = 20/167 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVAD 60
           AVVTG + GIG  TV  L   G  V   ARD +R   A   L+       +     DV D
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD 70

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              + + A+      G   ILVNNA   G             D     W+E         
Sbjct: 71  ALQVRAFAEACERTLGCASILVNNA---GQGRVSTFAE--TTDEA---WSEE-------- 114

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
              L+  ++         +P L+      IV V+S +         A
Sbjct: 115 ---LQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVA 158

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  104 bits (263), Expect = 2e-28
 Identities = 42/166 (25%), Positives = 65/166 (39%), Gaps = 19/166 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AV+TG++ GIG       A  G  +VL AR   R  EA   LK      V+   +DVA P
Sbjct: 10  AVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATP 69

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + ++ + VRS FG  DILVNNA       +   +     D +   W            
Sbjct: 70  EGVDAVVESVRSSFGGADILVNNAGTGS---NETIME--AADEK---WQFY--------- 112

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
                    + R+   L+P ++      I++ +S        ++  
Sbjct: 113 --WELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPI 156

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  105 bits (263), Expect = 3e-28
 Identities = 41/168 (24%), Positives = 64/168 (38%), Gaps = 20/168 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TGA  GIG  T  + A     +VL   ++    E   K K  G   V    +D ++ 
Sbjct: 34  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK-VHTFVVDCSNR 92

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I+S A  V+++ G + ILVNNA   GV    D  +                      E
Sbjct: 93  EDIYSSAKKVKAEIGDVSILVNNA---GVVYTSDLFA----------------TQDPQIE 133

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
           K    N        +  +P +  ++   IV V+S  G +   +  A C
Sbjct: 134 KTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYC 181

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  104 bits (262), Expect = 4e-28
 Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 21/167 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG +KGIGY  V +LA  G  V   +R+EK   E +E  +  G + V     D+   
Sbjct: 24  ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN-VEGSVCDLLSR 82

Query: 62  ATIHSLADFVRSQF-GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
                L   V   F GKL+ILVNNA   GV +  +A      + +   +N I        
Sbjct: 83  TERDKLMQTVAHVFDGKLNILVNNA---GVVIHKEAKD--FTEKD---YNII-------- 126

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
              + TN+  +  + ++  PLL+ S    ++ +SS  G         
Sbjct: 127 ---MGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSL 170

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  103 bits (260), Expect = 4e-28
 Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 19/154 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AV+TGA++GIG    R LA +G  + L AR   R  +   +L       V +H LDV+  
Sbjct: 5   AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKA 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            ++   +  V  +FG +D++V NA        G      +++    +++E++        
Sbjct: 65  ESVEEFSKKVLERFGDVDVVVANA--------GLGYFKRLEELSEEEFHEMI-------- 108

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                N  G  R  +  +  L+ +    +V  S 
Sbjct: 109 ---EVNLLGVWRTLKAFLDSLKRTGGLALVTTSD 139

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  104 bits (261), Expect = 1e-27
 Identities = 44/167 (26%), Positives = 62/167 (37%), Gaps = 21/167 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AVVTG   GIG  T  + A  G  +VL+  D+    +AV  L+  GFD       DV   
Sbjct: 34  AVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD-AHGVVCDVRHL 92

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +  LAD      G +D++ +NA   G+ V G        D     W            
Sbjct: 93  DEMVRLADEAFRLLGGVDVVFSNA---GIVVAGPLAQMNHDD-----W-----------R 133

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLP-RIVNVSSNMGKLKNTWQGA 167
             +  + +GS    E  +P L        I   +S  G + N   G 
Sbjct: 134 WVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGT 180

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  103 bits (260), Expect = 1e-27
 Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 41/158 (25%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            V+TGAN G+G  T R+LA  G  V++  RD ++G  A   +       V   +LD+ D 
Sbjct: 19  VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA----GQVEVRELDLQDL 74

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAI----FGVSVDGDALSGFVKDGEPIKWNEIVTPTY 117
           +++   AD         D+L+NNA I    + ++VDG                      +
Sbjct: 75  SSVRRFAD----GVSGADVLINNAGIMAVPYALTVDG----------------------F 108

Query: 118 ELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           E     + TN+ G   +  +L+P L      R+V VSS
Sbjct: 109 ES---QIGTNHLGHFALTNLLLPRLT----DRVVTVSS 139

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  104 bits (260), Expect = 1e-27
 Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 26/173 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLDVAD 60
           A VTG   G+G   VRQL + G  V +    +    +A+  L+  G    V+  QLDVA 
Sbjct: 11  AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
                  AD V ++FG + IL NNA   GV      L   +++     W           
Sbjct: 71  REGFKMAADEVEARFGPVSILCNNA---GV-----NLFQPIEESSYDDW----------- 111

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLP------RIVNVSSNMGKLKNTWQGA 167
           +  L  N +G        +P +             +VN +S    L     G 
Sbjct: 112 DWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGI 164

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  101 bits (255), Expect = 3e-27
 Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 21/167 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG  KGIG+  V + A  G ++   AR+E    E + K +  GF  V     D +  
Sbjct: 17  VLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ-VTGSVCDASLR 75

Query: 62  ATIHSLADFVRSQFG-KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
                L   V S FG KLDIL+NN    G       L       +   ++          
Sbjct: 76  PEREKLMQTVSSMFGGKLDILINNL---GAIRSKPTLD--YTAED---FSFH-------- 119

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
              + TN   +  + ++  PLL+ S    I+ +SS  G +  +    
Sbjct: 120 ---ISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSI 163

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  101 bits (254), Expect = 4e-27
 Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 19/169 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG  + IG   V  LA  G  V++   DE    +AVE L+  G D V    +DV + 
Sbjct: 16  AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD-VSSVVMDVTNT 74

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            ++ +    V  Q G++DILV  A   G+ +  +  +  + DG+   W +          
Sbjct: 75  ESVQNAVRSVHEQEGRVDILVACA---GICIS-EVKAEDMTDGQ---WLKQ--------- 118

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
             +  N  G  R C+ +  ++       IV + S  G + N  Q    Y
Sbjct: 119 --VDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAY 165

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  101 bits (253), Expect = 6e-27
 Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 19/166 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VT +  GIG    R+LA +G  VV+++R ++     V  L+  G  SV      V   
Sbjct: 17  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGKA 75

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                L     +  G +DILV+NAA+                     +  I+  T E+ +
Sbjct: 76  EDRERLVAMAVNLHGGVDILVSNAAVNPF------------------FGNIIDATEEVWD 117

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           K L  N   +  M + ++P ++      ++ VSS          G 
Sbjct: 118 KILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP 163

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  100 bits (252), Expect = 1e-26
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 20/168 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD--SVIFHQLDVA 59
            +VTG   GIG      L + G  V++  R+  +   AV++L+  G +  ++ +   D+ 
Sbjct: 14  YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT 73

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           +        D V +  G+L  +V+ A                          I     E 
Sbjct: 74  NEDETARAVDAVTAWHGRLHGVVHCAGGSEN------------------IGPITQVDSEA 115

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
             + +  N  G+  + +     +        V +SS      + W GA
Sbjct: 116 WRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGA 163

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 99.5 bits (249), Expect = 3e-26
 Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 21/167 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG ++GIGY  V +LAS G  V   +R++K   + + + +  GF  V     D++  
Sbjct: 12  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK-VEASVCDLSSR 70

Query: 62  ATIHSLADFVRSQF-GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           +    L + V + F GKL+ILVNNA   G+ +  +A        +   ++ I        
Sbjct: 71  SERQELMNTVANHFHGKLNILVNNA---GIVIYKEAKD--YTVED---YSLI-------- 114

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
              +  N+  +  +  +  P L+ S+   +V +SS  G L   ++  
Sbjct: 115 ---MSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAV 158

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =   99 bits (250), Expect = 3e-26
 Identities = 40/163 (24%), Positives = 61/163 (37%), Gaps = 27/163 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA+ GIG       A  G  VV+TAR+     E  +++   G +       DV D 
Sbjct: 11  AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE-AAALAGDVGDE 69

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A   +L +    +FG LD   NNA   G   +                  I + + E   
Sbjct: 70  ALHEALVELAVRRFGGLDTAFNNAGALGAMGE------------------ISSLSVEGWR 111

Query: 122 KCLRTN----YYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
           + L TN    +  +K      +P +       +   SS +G  
Sbjct: 112 ETLDTNLTSAFLAAKYQ----VPAIAALGGGSLTFTSSFVGHT 150

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 98.8 bits (247), Expect = 3e-26
 Identities = 24/158 (15%), Positives = 53/158 (33%), Gaps = 24/158 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTGA  G+G      L   G  V +  R      + +++ +    ++VI    D+A  
Sbjct: 6   IIVTGAGSGLGRALTIGLVERGHQVSMMGRRY----QRLQQQELLLGNAVIGIVADLAHH 61

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +           G  +++++ A        G    G V      +   +         
Sbjct: 62  EDVDVAFAAAVEWGGLPELVLHCA--------GTGEFGPVGVYTAEQIRRV--------- 104

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
             + +N   +  + +  + L+       + NV S+  +
Sbjct: 105 --MESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQ 139

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 99.2 bits (248), Expect = 5e-26
 Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 27/173 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TGA  GIG  T   LA++G+ V    R      E  +++  +G    I  + DV+D 
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQ-AIALEADVSDE 89

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +    +  +FG LDI+V NA I GV                        P  +L  
Sbjct: 90  LQMRNAVRDLVLKFGHLDIVVANAGINGVW----------------------APIDDLKP 127

Query: 122 ----KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
               + +  N  G+     + +P L+      IV VSS  G    T  GA  Y
Sbjct: 128 FEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAY 180

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 98.8 bits (247), Expect = 6e-26
 Identities = 36/170 (21%), Positives = 59/170 (34%), Gaps = 21/170 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TGA+ GIG +     A  G  V + AR         +++   G    +  + DV  P
Sbjct: 35  ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK-ALPIRCDVTQP 93

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +  + D +  + G +DI V NA   G+      L     D    ++  I         
Sbjct: 94  DQVRGMLDQMTGELGGIDIAVCNA---GIVSVQAML-----DMPLEEFQRI--------- 136

Query: 122 KCLRTNYYGSKRMC-EVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
               TN  G           ++       I+  +S  G + N  Q    Y
Sbjct: 137 --QDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHY 184

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 98.3 bits (246), Expect = 7e-26
 Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 30/162 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TG   GIG     +    G  V++T R    G +A + +       + F Q D +D 
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD--QIQFFQHDSSDE 66

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                L D     FG +  LVNNA   G++V+                  +   T     
Sbjct: 67  DGWTKLFDATEKAFGPVSTLVNNA---GIAVNKS----------------VEETTTAEWR 107

Query: 122 KCLRTN----YYGSKRMCEVLIPLLQLSDLP-RIVNVSSNMG 158
           K L  N    ++G++      I  ++   L   I+N+SS  G
Sbjct: 108 KLLAVNLDGVFFGTRLG----IQRMKNKGLGASIINMSSIEG 145

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 98.8 bits (247), Expect = 8e-26
 Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG   G+G    + L++ G  VV+T R       A  ++     + V     DV DP
Sbjct: 36  ALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDP 95

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +L   VR++F +LD+LVNNA      V  + ++   +      WN IV        
Sbjct: 96  DQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVT--FEQ-----WNGIV-------- 140

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLP--RIVNVSSNMGKLKNTWQGA 167
                N  G+    +    +++       RI+N  S   +        
Sbjct: 141 ---AANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAP 185

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 98.0 bits (245), Expect = 8e-26
 Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 22/160 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG--FDSVIFHQLDVA 59
           A++TGA++GIG      LA++G  VVL AR ++   +  +++  S       I   LD+ 
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT 69

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           D     +    +  ++G +DILVN A    + +DG +LS  V +     + +I+      
Sbjct: 70  DCTKADTEIKDIHQKYGAVDILVNAA---AMFMDG-SLSEPVDN-----FRKIM------ 114

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
                  N      + + +  ++++     I NV+S   K
Sbjct: 115 -----EINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAK 149

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 98.4 bits (246), Expect = 8e-26
 Identities = 43/159 (27%), Positives = 58/159 (36%), Gaps = 19/159 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            VVTG  KGIG       A  G  V +  R        V  L   G   VI  Q DV+D 
Sbjct: 13  VVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDR 72

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A   +LA     +FG +D++  NA +F      DA    +   +    N I         
Sbjct: 73  AQCDALAGRAVEEFGGIDVVCANAGVF-----PDAPLATMTPEQ---LNGI--------- 115

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
                N  G+    +  +  L  S   R+V  SS  G +
Sbjct: 116 --FAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI 152

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 98.0 bits (245), Expect = 1e-25
 Identities = 40/167 (23%), Positives = 61/167 (36%), Gaps = 20/167 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TGA KGIG +  R  A+ G  +VL+ RD      A   L       V    +D+A+P
Sbjct: 23  ALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEP 82

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                LA      FG LD+LVNNA   G+S     +           ++           
Sbjct: 83  DAPAELARRAAEAFGGLDVLVNNA---GISHPQPVVD--TDPQL---FDAT--------- 125

Query: 122 KCLRTNYYGSKRMC-EVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
             +  N      +   V   ++   +   I+ V+S           A
Sbjct: 126 --IAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYA 170

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 97.2 bits (243), Expect = 2e-25
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +VTGA  GIG    ++ A N  IVV     E R  + V++L+  G + V+  + DV+  
Sbjct: 10 VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE-VLGVKADVSKK 68

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFG 89
            +          + ++D+L NNA I  
Sbjct: 69 KDVEEFVRRTFETYSRIDVLCNNAGIMD 96

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 97.6 bits (244), Expect = 2e-25
 Identities = 41/168 (24%), Positives = 60/168 (35%), Gaps = 21/168 (12%)

Query: 2   AVVTGA-NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
            +VT A   GIG  T R+    G  VV++   E+R  E  ++L   G   V     DV  
Sbjct: 25  VLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS 84

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              + +L      + G+LD+LVNNA +      G      + D E   W+ +        
Sbjct: 85  TEAVDALITQTVEKAGRLDVLVNNAGLG-----GQTPVVDMTDEE---WDRV-------- 128

Query: 121 EKCLRTNYYGSKRMC-EVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
              L        R     L     +     IVN +S +G      Q  
Sbjct: 129 ---LNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSH 173

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 97.2 bits (243), Expect = 2e-25
 Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 20/166 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            V++G    +G    R+ A  G  +VL AR  +R  +  +++  +G    +    D+ D 
Sbjct: 14  VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR-ALSVGTDITDD 72

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A +  L D     +G++D+++NNA                              T+E   
Sbjct: 73  AQVAHLVDETMKAYGRVDVVINNAFRVP------------------SMKPFANTTFEHMR 114

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
             +    +G+ R+ +   P L+ S    +VNV+S + +      GA
Sbjct: 115 DAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGA 159

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 96.8 bits (242), Expect = 2e-25
 Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 24/161 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA+ G G     +  + G  V       +   E      H+  D V+  + DVAD 
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADE 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +++       QFG +D+LVNNA I G     ++ +G +      ++           +
Sbjct: 65  GDVNAAIAATMEQFGAIDVLVNNAGITG-----NSEAGVLHTTPVEQF-----------D 108

Query: 122 KCLRTN----YYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           K +  N    + G + +    +P + L     IVN++S   
Sbjct: 109 KVMAVNVRGIFLGCRAV----LPHMLLQGAGVIVNIASVAS 145

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 96.4 bits (241), Expect = 3e-25
 Identities = 43/154 (27%), Positives = 62/154 (40%), Gaps = 24/154 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TGA++GIG  T R L + G  V L ARDEKR L+A+        +  +    DV + 
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMARDEKR-LQALAA----ELEGALPLPGDVREE 62

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                    +   FG+L  LVNNA        G  +   V +    +W  ++        
Sbjct: 63  GDWARAVAAMEEAFGELSALVNNA--------GVGVMKPVHELTLEEWRLVL-------- 106

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
               TN  G+       +P L       IVNV S
Sbjct: 107 ---DTNLTGAFLGIRHAVPALLRRGGGTIVNVGS 137

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 96.8 bits (242), Expect = 3e-25
 Identities = 38/157 (24%), Positives = 57/157 (36%), Gaps = 25/157 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+V G   G+G  TVR+L   G  V+LT R+E       E+    G   V   + D+AD 
Sbjct: 11  AIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G-PRVHALRSDIADL 66

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I  L        G +D+L  NA +             V +     ++           
Sbjct: 67  NEIAVLGAAAGQTLGAIDLLHINAGVS-----ELEPFDQVSEAS---YDRQ--------- 109

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
                N  G+    + L PL++  +   IV  SS   
Sbjct: 110 --FAVNTKGAFFTVQRLTPLIR--EGGSIVFTSSVAD 142

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 96.5 bits (241), Expect = 4e-25
 Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 19/154 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AVVTGA++GIG    R+L S G  VVLTARD ++      ++  +G      H  D++  
Sbjct: 32  AVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG-GEAESHACDLSHS 90

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I + A  V +  G+ D+LVNNA +             +K  E   W+ +         
Sbjct: 91  DAIAAFATGVLAAHGRCDVLVNNAGVGWF----GGPLHTMKPAE---WDAL--------- 134

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
             +  N      +     P +  +    I+N+SS
Sbjct: 135 --IAVNLKAPYLLLRAFAPAMIAAKRGHIINISS 166

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 96.5 bits (241), Expect = 4e-25
 Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 25/157 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AV+TGA  GIG    ++  + G  V +T R +     A+ ++   G    +  Q D A+ 
Sbjct: 32  AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G-GGAVGIQADSANL 87

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A +  L + V+++ G++D+L  NA                          +   T E  +
Sbjct: 88  AELDRLYEKVKAEAGRIDVLFVNAGGG-------------------SMLPLGEVTEEQYD 128

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
                N  G     +  +PLL       +V   S  G
Sbjct: 129 DTFDRNVKGVLFTVQKALPLLARGS--SVVLTGSTAG 163

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 95.7 bits (239), Expect = 7e-25
 Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 17/154 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG+  GIG      LA  G  VV+   + +      +++   G    I   +DV+DP
Sbjct: 12  GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT-AISVAVDVSDP 70

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            +  ++AD   ++FG +D LVNNAAIFG       L+  +       + +          
Sbjct: 71  ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLT--IDPEY---YKKF--------- 116

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
             +  N  G+      +   +       IVN SS
Sbjct: 117 --MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSS 148

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 96.1 bits (240), Expect = 8e-25
 Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 18/169 (10%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A VTG++ GIG+      A  G  V +         +A    K  G      ++ +++DP
Sbjct: 37  ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH-SKAYKCNISDP 95

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            ++          FG +D+ V NA   GV+         +       WN+I         
Sbjct: 96  KSVEETISQQEKDFGTIDVFVANA---GVTWTQGPE---IDVDNYDSWNKI--------- 140

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
             +  +  G       +  + + +    ++  SS  GK+ N  Q    Y
Sbjct: 141 --ISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPY 187

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 95.3 bits (238), Expect = 1e-24
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 1/88 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +VTGA   IG  T  +LA  G  + L   + +   +A   ++  G +    +  DV   
Sbjct: 10 CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE-ARSYVCDVTSE 68

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFG 89
            +    D V   FGK+D L NNA   G
Sbjct: 69 EAVIGTVDSVVRDFGKIDFLFNNAGYQG 96

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 95.8 bits (239), Expect = 1e-24
 Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 24/168 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  G+G      LA  G  V L  R      E   ++        +    DV DP
Sbjct: 31  AIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDD----ALCVPTDVTDP 86

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            ++ +L      +FG++D+L NNA            +  ++D    +W ++V        
Sbjct: 87  DSVRALFTATVEKFGRVDVLFNNAGTGAP-------AIPMEDLTFAQWKQVV-------- 131

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLP--RIVNVSSNMGKLKNTWQGA 167
               TN  G     +    +++  +    RI+N  S        +   
Sbjct: 132 ---DTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAP 176

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 95.8 bits (239), Expect = 1e-24
 Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 19/157 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TG   G+G   V +  + G  V +  +  +R  E        G  + +    DV   
Sbjct: 8   ALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---G-GNAVGVVGDVRSL 63

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                 A+   + FGK+D L+ NA I+       AL+   +D     +++I         
Sbjct: 64  QDQKRAAERCLAAFGKIDTLIPNAGIWD---YSTALADLPEDKIDAAFDDI--------- 111

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
                N  G     +  +P L +S    +V   SN G
Sbjct: 112 --FHVNVKGYIHAVKACLPAL-VSSRGSVVFTISNAG 145

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 95.3 bits (238), Expect = 1e-24
 Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 22/155 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA-VEKLKHSGFDSVIFHQLDVAD 60
            ++TGA+ GIG    R+L   G  ++L AR + R +EA   +++ +G  + +   LDV D
Sbjct: 7   ILITGASGGIGEGIARELGVAGAKILLGARRQAR-IEAIATEIRDAG-GTALAQVLDVTD 64

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             ++ + A      +G++D+LVNNA +  +S         +   +  +W  ++       
Sbjct: 65  RHSVAAFAQAAVDTWGRIDVLVNNAGVMPLS--------PLAAVKVDEWERMI------- 109

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                 N  G       ++P+++     +I+N+ S
Sbjct: 110 ----DVNIKGVLWGIGAVLPIMEAQRSGQIINIGS 140

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 95.3 bits (238), Expect = 1e-24
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLDVAD 60
            ++TG   G+G  T  +LA+ G  + L     +    +   +  +  D  V+    DV+D
Sbjct: 16  VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 75

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFG 89
            A + +       +FG++D   NNA I G
Sbjct: 76  EAQVEAYVTATTERFGRIDGFFNNAGIEG 104

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 95.4 bits (238), Expect = 1e-24
 Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 22/166 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A VTG + GIG    R LA+ GI V   ARD K    AV+ L+ +G D V     DV   
Sbjct: 27  AFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD-VDGSSCDVTST 85

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +H+       +FG + ILVN+A       +G   +  + D     W ++         
Sbjct: 86  DEVHAAVAAAVERFGPIGILVNSAGR-----NGGGETADLDDAL---WADV--------- 128

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLP--RIVNVSSNMGKLKNTWQ 165
             L TN  G  R+   ++    + +    RIVN++S  GK    + 
Sbjct: 129 --LDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYA 172

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 94.9 bits (237), Expect = 2e-24
 Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 26/161 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TGA  G G    ++ A  G  VV+  RD+        ++     D+ +    D++  
Sbjct: 12  ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG----DAALAVAADISKE 67

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A + +  +   S+FGK+DILVNNA I              +  EP ++           +
Sbjct: 68  ADVDAAVEAALSKFGKVDILVNNAGIGHK-------PQNAELVEPEEF-----------D 109

Query: 122 KCLRTN----YYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           + +  N    Y  + ++               I+NV+S   
Sbjct: 110 RIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGA 150

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 94.9 bits (237), Expect = 2e-24
 Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 21/166 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TGA  GIG ET R LA  G  VVL    E     A   +   G    + H +D+ + 
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---G-RGAVHHVVDLTNE 69

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            ++ +L DF    FG+LDI+ NNA     S   D L              +   T ++ +
Sbjct: 70  VSVRALIDFTIDTFGRLDIVDNNA---AHSDPADML--------------VTQMTVDVWD 112

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
                N  G+  MC+  IP L  +    IVN+SS           A
Sbjct: 113 DTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTA 158

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 95.0 bits (237), Expect = 2e-24
 Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 24/162 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA-VEKLKHSGFD-SVIFHQLDVA 59
           A+VTGA+ GIG    R L   G+ VV  AR     +E    + K +G+  ++I ++ D++
Sbjct: 35  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGN-IEELAAECKSAGYPGTLIPYRCDLS 93

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           +   I S+   +RSQ   +DI +NNA        G A    +  G    W ++       
Sbjct: 94  NEEDILSMFSAIRSQHSGVDICINNA--------GLARPDTLLSGSTSGWKDM------- 138

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPR--IVNVSSNMGK 159
                  N              ++  ++    I+N++S  G 
Sbjct: 139 ----FNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH 176

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 94.5 bits (236), Expect = 2e-24
 Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 21/159 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLDVAD 60
           AVVT  + G+G+ +  +LA NG  ++L +R+ ++   A  ++        V     D+ +
Sbjct: 10  AVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE 69

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           P  I  L +  R   G  DILV +    G    G  +   +   +   W+E         
Sbjct: 70  PGDIDRLFEKAR-DLGGADILVYST---GGPRPGRFME--LGVED---WDES-------- 112

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
               R     +  +       +      R+V + S    
Sbjct: 113 ---YRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLL 148

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 95.4 bits (238), Expect = 2e-24
 Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 20/156 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVA 59
            ++TG++ GIG       A  G  V +T R+E R  E  +++  +G   + +     DV 
Sbjct: 29  VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 88

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           + +    + +   ++FGK+DILVNNA   G ++     +          + +        
Sbjct: 89  EASGQDDIINTTLAKFGKIDILVNNA---GANLADGTANTDQPVEL---YQKT------- 135

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                + N+     M +     L +     IVNVSS
Sbjct: 136 ----FKLNFQAVIEMTQKTKEHL-IKTKGEIVNVSS 166

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 96.0 bits (239), Expect = 2e-24
 Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 27/176 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG-------LEAVEKLKHSGFDSVIFH 54
             +TGA++GIG     + A +G  +V+ A+  +           A E+++  G  ++   
Sbjct: 48  VFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPC- 106

Query: 55  QLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT 114
            +DV D   I +  +    +FG +DILVNNA+                    I     + 
Sbjct: 107 IVDVRDEQQISAAVEKAIKKFGGIDILVNNASA-------------------ISLTNTLD 147

Query: 115 PTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
              +  +  +  N  G+    +  IP L+ S +  I+N+S  +      ++    Y
Sbjct: 148 TPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAY 203

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 94.6 bits (236), Expect = 3e-24
 Identities = 41/162 (25%), Positives = 61/162 (37%), Gaps = 18/162 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVA 59
           A++TG++ GIG  T    A  G  V +T R  +R  E  +++  +G    +V     DV 
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
             A    +      +FGKLDILVNNA                              + E 
Sbjct: 69  TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQS---------------KTGTAQSIES 113

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLK 161
            +  L  N      + +  +P L  +    IVN+SS    L 
Sbjct: 114 YDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH 154

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 94.6 bits (236), Expect = 3e-24
 Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 19/159 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG  KGIG       A  G  V + AR  +       +L   G  +VI  +LDV+DP
Sbjct: 44  VLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDP 103

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            +    A  V   FG LD++  NA IF      +A    +   +    +E+         
Sbjct: 104 GSCADAARTVVDAFGALDVVCANAGIF-----PEARLDTMTPEQ---LSEV--------- 146

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
             L  N  G+    +  +  L  S   R++  SS  G +
Sbjct: 147 --LDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV 183

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 94.6 bits (236), Expect = 3e-24
 Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 18/156 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS--VIFHQLDVA 59
            ++TG++ GIG  T    A  G  V +T R  +R  E  + +  SG     V     DV 
Sbjct: 9   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 68

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
                  + +    QFGK+D+LVNNA   G ++   A      D     +++        
Sbjct: 69  TEDGQDQIINSTLKQFGKIDVLVNNA---GAAIPD-AFGTTGTDQGIDIYHKT------- 117

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
               L+ N      M + + P L ++    IVNVSS
Sbjct: 118 ----LKLNLQAVIEMTKKVKPHL-VASKGEIVNVSS 148

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 94.2 bits (235), Expect = 4e-24
 Identities = 42/168 (25%), Positives = 64/168 (38%), Gaps = 25/168 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG ++GIG    + L   G  V + ARD +   +   +L   G         D++  
Sbjct: 32  ALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSSE 89

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A    LA  +     +LDILVNNA   G S      S          W ++         
Sbjct: 90  AGARRLAQALGELSARLDILVNNA---GTSWGAALES--YPVSG---WEKV--------- 132

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLP----RIVNVSSNMGKLKNTWQ 165
             ++ N        + L+PLL+ S       R++N+ S  G      Q
Sbjct: 133 --MQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQ 178

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 93.4 bits (233), Expect = 5e-24
 Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 21/166 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG       A  G  VV+T    +        ++ +G    I  + +V D 
Sbjct: 15  AIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK-AIGLECNVTDE 73

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
               ++      QFGK+ +LVNNA        G      +   +   +            
Sbjct: 74  QHREAVIKAALDQFGKITVLVNNAGGG-----GPKPFD-MPMSD---FEWA--------- 115

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
              + N +   R+ ++  P +Q +    I+N+SS  G+  N    +
Sbjct: 116 --FKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMAS 159

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 94.8 bits (236), Expect = 6e-24
 Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 27/165 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG----LEAVEKLKHSGFDSVIFHQLD 57
            ++TGA+ G G  T   LA  G  V  + RD        +EA+          +   +LD
Sbjct: 8   ILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELD 67

Query: 58  VADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTY 117
           V    ++    D +  + G++D+L++NA        G  + G  +   P           
Sbjct: 68  VQSQVSVDRAIDQIIGEDGRIDVLIHNA--------GHMVFGPAEAFTP----------- 108

Query: 118 ELAEKCLRTNYYGSKRMCEVLIPLL--QLSDLPRIVNVSSNMGKL 160
           E   +    N   ++R+    +P +  Q      ++ +SS+    
Sbjct: 109 EQFAELYDINVLSTQRVNRAALPHMRRQKHG--LLIWISSSSSAG 151

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 93.2 bits (232), Expect = 6e-24
 Identities = 40/167 (23%), Positives = 63/167 (37%), Gaps = 26/167 (15%)

Query: 2   AVVTGANKGIGYETVRQLA---SNGIIVVLTARDEKRGLEAVEKLKHSGFDS-VIFHQLD 57
            V+TGA++G G     QLA   S G +++++AR E    +  E+L     D  V+    D
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68

Query: 58  VADPATIHSLADFVRSQFG----KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIV 113
           +   A +  L   VR        +  +L+NNAA       GD   GF+   +  + N   
Sbjct: 69  LGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATL-----GDVSKGFLNVNDLAEVNNY- 122

Query: 114 TPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP--RIVNVSSNMG 158
                        N      +    +   Q S      +VN+SS   
Sbjct: 123 ----------WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA 159

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 93.5 bits (233), Expect = 6e-24
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 22/166 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG E  R+L   G+ V + AR E+     +++L+ +G ++      DV   
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR-TCDVRSV 83

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I +L   V  ++G +D+LVNNA        G   +  + D     W ++         
Sbjct: 84  PEIEALVAAVVERYGPVDVLVNNAGR-----PGGGATAELADEL---WLDV--------- 126

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLP--RIVNVSSNMGKLKNTWQ 165
             + TN  G  R+ + ++    + +    RIVN++S  GK      
Sbjct: 127 --VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHA 170

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 93.5 bits (233), Expect = 7e-24
 Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 25/171 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A +TG   GIG+        +G   V+ +R   R L A  KL  +     +   +DV  P
Sbjct: 30  AFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAP 89

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIK---WNEIVTPTYE 118
             + +  D    +FG++DIL+N AA             F+     +    +  ++     
Sbjct: 90  PAVMAAVDQALKEFGRIDILINCAAG-----------NFLCPAGALSFNAFKTVM----- 133

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
                   +  G+  +  VL           IVN+++ +G      Q    
Sbjct: 134 ------DIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAG 178

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 93.0 bits (232), Expect = 1e-23
 Identities = 29/159 (18%), Positives = 60/159 (37%), Gaps = 24/159 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLDVAD 60
           A+VTG+  GIG      L + G  V++  R E+   E +++++    D  +     D+  
Sbjct: 13  ALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT 72

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
                 + +    ++ K+DIL+NN  IF      +     + D +   W ++        
Sbjct: 73  EQGCQDVIE----KYPKVDILINNLGIFE---PVEYFD--IPDED---WFKL-------- 112

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK 159
                 N     R+    +  +      R++ ++S    
Sbjct: 113 ---FEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAI 148

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 92.6 bits (231), Expect = 1e-23
 Identities = 37/157 (23%), Positives = 60/157 (38%), Gaps = 23/157 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+V+G  +G+G   VR + + G  VV     ++ G     +L     D+  +  LDV  P
Sbjct: 10  ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQP 65

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A   +  D   + FG L +LVNNA I                        I        +
Sbjct: 66  AQWKAAVDTAVTAFGGLHVLVNNAGILN-------------------IGTIEDYALTEWQ 106

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           + L  N  G       ++  ++ +    I+N+SS  G
Sbjct: 107 RILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG 143

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 92.5 bits (231), Expect = 1e-23
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 4/88 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTG   G+G E V+ L   G  V  +  +E  G +   +L     +  +F + DV+  
Sbjct: 9  ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----ERSMFVRHDVSSE 64

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFG 89
          A    +   V+ + G L++LVNNA I  
Sbjct: 65 ADWTLVMAAVQRRLGTLNVLVNNAGILL 92

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 93.0 bits (232), Expect = 1e-23
 Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 23/157 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG   GIG  T    A NG  VV+   +E   +    ++           ++DV+  
Sbjct: 30  CIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSK----AFGVRVDVSSA 85

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
               S+ +   +++G++D+LVNNA   G    G+                +VT   E  +
Sbjct: 86  KDAESMVEKTTAKWGRVDVLVNNA---GFGTTGN----------------VVTIPEETWD 126

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           + +  N  G     + +IP+++ +    I+N +S   
Sbjct: 127 RIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA 163

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 92.2 bits (230), Expect = 1e-23
 Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 23/157 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TG  +G+G E  RQ  + G  VVL    ++ G     +L     D+  +  LDV   
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG----DAARYQHLDVTIE 63

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                +  + R +FG +D LVNNA I                        + T + E   
Sbjct: 64  EDWQRVVAYAREEFGSVDGLVNNAGIST-------------------GMFLETESVERFR 104

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           K +  N  G     + +IP ++ +    IVN+SS  G
Sbjct: 105 KVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG 141

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 92.6 bits (231), Expect = 1e-23
 Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 21/166 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TGA  GIG E     A+ G  VV++  +       V++++  G       + D+   
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ-AFACRCDITSE 72

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +LADF  S+ GK+DILVNNA        G      +   +   +            
Sbjct: 73  QELSALADFAISKLGKVDILVNNAGGG-----GPKPFD-MPMAD---FRRA--------- 114

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
                N +    + +++ P ++ +    I+ ++S   + KN    +
Sbjct: 115 --YELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTS 158

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 92.2 bits (230), Expect = 1e-23
 Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 24/155 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTGA  G G    R+    G  V+ T R ++R    +++LK    D++   QLDV + 
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQER----LQELKDELGDNLYIAQLDVRNR 58

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDAL-SGFVKDGEPIKWNEIVTPTYELA 120
           A I  +   + +++  +DILVNNA        G AL            W  ++       
Sbjct: 59  AAIEEMLASLPAEWCNIDILVNNA--------GLALGMEPAHKASVEDWETMID------ 104

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                TN  G   M   ++P +   +   I+N+ S
Sbjct: 105 -----TNNKGLVYMTRAVLPGMVERNHGHIINIGS 134

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 92.3 bits (230), Expect = 2e-23
 Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            V+TGA+ GIG    R+ +  G  ++L AR  +R L+A+         + +  Q+DV D 
Sbjct: 19  VVITGASSGIGEAIARRFSEEGHPLLLLARRVER-LKALNL------PNTLCAQVDVTDK 71

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            T  +        +G  D +VNNA        G  L G +   E  +W  +         
Sbjct: 72  YTFDTAITRAEKIYGPADAIVNNA--------GMMLLGQIDTQEANEWQRMF-------- 115

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                N  G     + ++  ++  +   I+N+SS
Sbjct: 116 ---DVNVLGLLNGMQAVLAPMKARNCGTIINISS 146

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 92.2 bits (230), Expect = 2e-23
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 2/88 (2%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TG   GIG  T +     G  VV+    +  G +    +       + F   DV   
Sbjct: 19  AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--VISFVHCDVTKD 76

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFG 89
             + +L D   ++ GKLDI+  N  +  
Sbjct: 77  EDVRNLVDTTIAKHGKLDIMFGNVGVLS 104

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 91.8 bits (229), Expect = 2e-23
 Identities = 35/167 (20%), Positives = 53/167 (31%), Gaps = 24/167 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG +KGIG    R L   G  V +   D       V  L++ G       ++DV   
Sbjct: 15  AIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG----FAVEVDVTKR 70

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A++ +         G  D+L  NA +          +  + D E   W+           
Sbjct: 71  ASVDAAMQKAIDALGGFDLLCANAGVST-----MRPAVDITDEE---WDFN--------- 113

Query: 122 KCLRTNYYGSKRMC-EVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
                N  G            L  +    IVN +S   K+       
Sbjct: 114 --FDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAH 158

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 91.8 bits (229), Expect = 2e-23
 Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           ++TG + G+G     + A  G  VV+T R +++  EA  +++      ++  Q+DV + 
Sbjct: 9  VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ-ILTVQMDVRNT 67

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            I  + + +  +FG++DIL+NNAA 
Sbjct: 68 DDIQKMIEQIDEKFGRIDILINNAAG 93

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 91.9 bits (229), Expect = 3e-23
 Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 1/87 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVAD 60
          A+VTGA +GIG      L   G  V L   + + G++    L         +F Q DVAD
Sbjct: 10 ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 69

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
             +      V   FG+LDILVNNA +
Sbjct: 70 QQQLRDTFRKVVDHFGRLDILVNNAGV 96

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 91.4 bits (228), Expect = 3e-23
 Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 31/159 (19%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA-VEKLKHSGFDSVIFHQLDVAD 60
           A++TGA+ GIG  T R LA+ G  V + AR  ++ L A  ++L  +G   V   +LDVAD
Sbjct: 10  ALITGASSGIGEATARALAAEGAAVAIAARRVEK-LRALGDELTAAG-AKVHVLELDVAD 67

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              + +         G LDILVNNA        G  L G V+D +   W  ++       
Sbjct: 68  RQGVDAAVASTVEALGGLDILVNNA--------GIMLLGPVEDADTTDWTRMI------- 112

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPR----IVNVSS 155
                TN  G   M    +P L      R    +V +SS
Sbjct: 113 ----DTNLLGLMYMTRAALPHLL-----RSKGTVVQMSS 142

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 91.8 bits (229), Expect = 3e-23
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 4/88 (4%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG    R+LA  G  V+    D      A  K+           ++DV+D 
Sbjct: 32  AIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCG----AAACRVDVSDE 87

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFG 89
             I ++ D   + FG +D LV NA +  
Sbjct: 88  QQIIAMVDACVAAFGGVDKLVANAGVVH 115

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 91.9 bits (229), Expect = 3e-23
 Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 23/155 (14%)

Query: 4   VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
           VTGA+ G G        + G  V+ TAR      EA++ L  +  D      LDV D   
Sbjct: 10  VTGASSGFGRAIAEAAVAAGDTVIGTARR----TEALDDLVAAYPDRAEAISLDVTDGER 65

Query: 64  IHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKC 123
           I  +A  V +++G++D+LVNNA        G    G  ++            T       
Sbjct: 66  IDVVAADVLARYGRVDVLVNNA--------GRTQVGAFEET-----------TERELRDL 106

Query: 124 LRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
              + +G  R+   L+P ++      +VN+SS  G
Sbjct: 107 FELHVFGPARLTRALLPQMRERGSGSVVNISSFGG 141

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 91.5 bits (228), Expect = 4e-23
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           VVTG  +GIG   VR   ++G  VV+  +DE  G    ++L        +F   DV   
Sbjct: 12 VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----PGAVFILCDVTQE 66

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFG 89
            + +L      +FG+LD +VNNA    
Sbjct: 67 DDVKTLVSETIRRFGRLDCVVNNAGHHP 94

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 91.2 bits (227), Expect = 4e-23
 Identities = 22/154 (14%), Positives = 49/154 (31%), Gaps = 21/154 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
             V GA   IG E  ++ A+ G  V    R+ ++    V +++ +G   ++   LD  + 
Sbjct: 10  VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-GRIVARSLDARNE 68

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +  +        L++ + N    G +V+   L     +     +            
Sbjct: 69  DEVTAFLNAAD-AHAPLEVTIFNV---GANVNFPIL-----ETTDRVF-----------R 108

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           K      +           L+      +I    +
Sbjct: 109 KVWEMACWAGFVSGRESARLMLAHGQGKIFFTGA 142

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 91.9 bits (229), Expect = 5e-23
 Identities = 30/172 (17%), Positives = 59/172 (34%), Gaps = 26/172 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A +TG   G+G      L+S G   V+ +R         E++     + V   Q DV DP
Sbjct: 29  AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP 88

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIK---WNEIVTPTYE 118
             + +    +    G  +I++NNAA             F+   E +    W  I      
Sbjct: 89  DMVQNTVSELIKVAGHPNIVINNAAG-----------NFISPTERLSPNAWKTIT----- 132

Query: 119 LAEKCLRTNYYGSKRMC-EVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
                      G+  +  E+   L++       +++++   +  + +     
Sbjct: 133 ------DIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA 178

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 90.8 bits (226), Expect = 5e-23
 Identities = 21/166 (12%), Positives = 44/166 (26%), Gaps = 33/166 (19%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +V G +  +G E V+   S     +     E    +                 +  +  
Sbjct: 25  ILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH-------------SFTIKDSGE 71

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I S+ + + S+  K+D  V  A  +               G             +  +
Sbjct: 72  EEIKSVIEKINSKSIKVDTFVCAAGGWS-------------GGNASS-----DEFLKSVK 113

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
             +  N Y +     +   LL        V   ++    + +   A
Sbjct: 114 GMIDMNLYSAFASAHIGAKLLNQGG--LFVLTGASAALNRTSGMIA 157

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 90.7 bits (226), Expect = 8e-23
 Identities = 43/157 (27%), Positives = 58/157 (36%), Gaps = 31/157 (19%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG   V  L + G  V +  R                    +    D+ + 
Sbjct: 31  ALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD------------LHLPGDLREA 78

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A    L   V +  G+LDI+VNNA   GV   G        D +   W+           
Sbjct: 79  AYADGLPGAVAAGLGRLDIVVNNA---GVISRGRITE--TTDAD---WSLS--------- 121

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
             L  N     R+C   IPL+  +    IVNV+S  G
Sbjct: 122 --LGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWG 156

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 90.0 bits (224), Expect = 9e-23
 Identities = 36/170 (21%), Positives = 65/170 (38%), Gaps = 25/170 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            +VTG ++GIG   V  L S     +V   AR E    +  EK      D   +   D+ 
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG----DRFFYVVGDIT 60

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           + + +  L +      GK+D LV NA +             V + +   W ++       
Sbjct: 61  EDSVLKQLVNAAVKGHGKIDSLVANAGVLEP-------VQNVNEIDVNAWKKL------- 106

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
                  N++    +  + +P L+ ++   +V VSS+   +  +  GA  
Sbjct: 107 ----YDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYG 151

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 90.3 bits (225), Expect = 1e-22
 Identities = 35/161 (21%), Positives = 60/161 (37%), Gaps = 38/161 (23%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG + GIG   V  L   G  VV  + DEK  +   +             ++DV + 
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD-----------HFKIDVTNE 65

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +    +    ++G++DILVNNA   G+                     +     E+  
Sbjct: 66  EEVKEAVEKTTKKYGRIDILVNNA---GIEQYSP----------------LHLTPTEIWR 106

Query: 122 KCLRTN----YYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           + +  N    Y  +K      IP++       I+N++S   
Sbjct: 107 RIIDVNVNGSYLMAKYT----IPVMLAIGHGSIINIASVQS 143

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 89.9 bits (224), Expect = 1e-22
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 22/166 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG+  GIG    + LA  G  +VL    +     A+ ++   G    + H  D++D 
Sbjct: 7   ALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVK-AVHHPADLSDV 63

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A I +L      +FG +DILVNNA I  V+         V+      W++I         
Sbjct: 64  AQIEALFALAEREFGGVDILVNNAGIQHVAP--------VEQFPLESWDKI--------- 106

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
             +  N         + +P ++  +  RI+N++S  G + +T + A
Sbjct: 107 --IALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAA 150

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 89.9 bits (224), Expect = 1e-22
 Identities = 39/165 (23%), Positives = 60/165 (36%), Gaps = 20/165 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG N+GIG    R +A+ G  V +  R     +E  EK+          +Q DV++ 
Sbjct: 17  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT 76

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +      + +  G +  L+ NA   GVSV   A     +D     +  +         
Sbjct: 77  DIVTKTIQQIDADLGPISGLIANA---GVSVVKPATELTHED-----FAFV--------- 119

Query: 122 KCLRTNYYGSKRMC-EVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
                N +G    C  V    LQ      IV  SS   ++ N   
Sbjct: 120 --YDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS 162

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 90.0 bits (224), Expect = 1e-22
 Identities = 30/171 (17%), Positives = 55/171 (32%), Gaps = 18/171 (10%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           AV+TG  + IG+    +L   G  VV+     E      V +L  +   S +  + D++ 
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 73

Query: 61  PATIHS----LADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPT 116
            +++      + D     FG+ D+LVNNA+ +              D       +     
Sbjct: 74  SSSLLDCCEDIIDCSFRAFGRCDVLVNNASAY-----YPTPLLPGDDTNGAADAKP---I 125

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP-----RIVNVSSNMGKLKN 162
                +   +N      +                    +VN+   M  L  
Sbjct: 126 DAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL 176

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 89.5 bits (223), Expect = 1e-22
 Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 26/157 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG  +GIG    +  A  G +V L     + G E  E +         F Q+D+ D 
Sbjct: 9   VLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGG------AFFQVDLEDE 61

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                  +      G++D+LVNNA    ++  G AL+  + +     W            
Sbjct: 62  RERVRFVEEAAYALGRVDVLVNNA---AIAAPGSALTVRLPE-----W-----------R 102

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           + L  N      +  +    ++      IVNV+S  G
Sbjct: 103 RVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG 139

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 89.5 bits (223), Expect = 1e-22
 Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 29/169 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            V+TGA++GIG   VR        VV T+R  K   +            +     D++ P
Sbjct: 31  VVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPD----------IHTVAGDISKP 80

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            T   +      +FG++D LVNNA   GV +    +   +   +   ++           
Sbjct: 81  ETADRIVREGIERFGRIDSLVNNA---GVFLAKPFVE--MTQED---YDHN--------- 123

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
             L  N  G   + +     +       IV++++++         +   
Sbjct: 124 --LGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALA 170

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 90.0 bits (224), Expect = 2e-22
 Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 25/157 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
             +TGA  G G    R+ A  G  +VLT R E+R L+A+  +L       V+   LDV D
Sbjct: 24  LFITGATSGFGEACARRFAEAGWSLVLTGRREER-LQALAGELSAKT--RVLPLTLDVRD 80

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDAL-SGFVKDGEPIKWNEIVTPTYEL 119
            A + +  D +  +F  L  L+NNA        G AL +   +  +   W+ +V      
Sbjct: 81  RAAMSAAVDNLPEEFATLRGLINNA--------GLALGTDPAQSCDLDDWDTMV------ 126

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPR-IVNVSS 155
                 TN  G      +L+P L        IVN+ S
Sbjct: 127 -----DTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS 158

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 89.1 bits (222), Expect = 3e-22
 Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 21/166 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTG+++G+G     +LA NG  +V+  AR +K  LE  E+++  G   ++  + +V  
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVV-KANVGQ 65

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           PA I  +   +   FG+LD+ VNNAA              +++     W+          
Sbjct: 66  PAKIKEMFQQIDETFGRLDVFVNNAASG-----VLRPVMELEETH---WDWT-------- 109

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQG 166
              +  N        +    L++ +    IV++SS           
Sbjct: 110 ---MNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYT 152

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 88.8 bits (221), Expect = 3e-22
 Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 25/167 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK-LKHSGFDSVIFHQLDVAD 60
            ++TG+++GIG  T R  A  G  V L  R     ++     ++  G D   F   D+A 
Sbjct: 10  VLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGD-AAFFAADLAT 68

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
                 L D   ++FG +D+L+NNA        G      + D     ++ +        
Sbjct: 69  SEACQQLVDEFVAKFGGIDVLINNAGGLV----GRKPLPEIDDTF---YDAV-------- 113

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLP-----RIVNVSSNMGKLKN 162
              +  N        +  +P L  +         +++  S  G    
Sbjct: 114 ---MDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG 157

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 89.6 bits (223), Expect = 3e-22
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS----VIFHQLD 57
           A+VTG   GIG   V++L   G  VV+ +R  +R   A ++L+ +   +    VI  Q +
Sbjct: 21  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 80

Query: 58  VADPATIHSLADFVRSQFGKLDILVNNAAI 87
           + +   +++L       FGK++ LVNN   
Sbjct: 81  IRNEEEVNNLVKSTLDTFGKINFLVNNGGG 110

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 89.3 bits (222), Expect = 3e-22
 Identities = 34/180 (18%), Positives = 68/180 (37%), Gaps = 36/180 (20%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG-------LEAVEKLKHSGFDSVIFH 54
             ++G ++GIG    +++A++G  V L A+  +           A ++++ +G  ++   
Sbjct: 12  MFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPI- 70

Query: 55  QLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT 114
             D+ D   + +       QFG +DI VNNA+                          + 
Sbjct: 71  VGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAI-----------------------NLG 107

Query: 115 PTYELAEK----CLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
              E+  K           G+  + +  IP ++  D P I+ +S  +  L+  W     Y
Sbjct: 108 SIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIR-LEPKWLRPTPY 166

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 88.7 bits (221), Expect = 3e-22
 Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 21/167 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA +GIG     +L  +G  V +   ++        ++  +G    +  ++DV+D 
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH-AVAVKVDVSDR 63

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +  +  R   G  D++VNNA +                        I + T E+ +
Sbjct: 64  DQVFAAVEQARKTLGGFDVIVNNAGVAPS-------------------TPIESITPEIVD 104

Query: 122 KCLRTNYYGSKRMC-EVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           K    N  G        +    +     +I+N  S  G + N     
Sbjct: 105 KVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAV 151

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 88.8 bits (221), Expect = 4e-22
 Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA +GIG E  + LA +   V+  +R +K     V+++K  G++S  +   DV+  
Sbjct: 47  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGY-AGDVSKK 105

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAI 87
             I  + + + ++   +DILVNNA I
Sbjct: 106 EEISEVINKILTEHKNVDILVNNAGI 131

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 88.0 bits (219), Expect = 4e-22
 Identities = 34/161 (21%), Positives = 62/161 (38%), Gaps = 27/161 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNG-------IIVVLTARDEKRGLEAVEKLKHSGFDSVIFH 54
            ++TGA KGIG     + A           ++VL++R      +   + +  G       
Sbjct: 5   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTI 63

Query: 55  QLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT 114
             D++D A +  L   +  ++G +D LVNNA   GV   G       +D     ++  + 
Sbjct: 64  TADISDMADVRRLTTHIVERYGHIDCLVNNA---GVGRFGALSDLTEED-----FDYTM- 114

Query: 115 PTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                      TN  G+  + + L  L++      I  ++S
Sbjct: 115 ----------NTNLKGTFFLTQALFALMERQHSGHIFFITS 145

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 88.4 bits (220), Expect = 5e-22
 Identities = 24/154 (15%), Positives = 56/154 (36%), Gaps = 26/154 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TGA++ +G     +L  +G  V+++ R E   +  + +         +    D +  
Sbjct: 30  ILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA------GAVALYGDFSCE 83

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I +  D +++Q   L  +V+NA+ +   +                         +   
Sbjct: 84  TGIMAFIDLLKTQTSSLRAVVHNASEW---LAETPGE-----------------EADNFT 123

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           +    +      +     PLL  S++  IV++S 
Sbjct: 124 RMFSVHMLAPYLINLHCEPLLTASEVADIVHISD 157

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 88.1 bits (219), Expect = 5e-22
 Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 14/158 (8%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            VVTGA++GIG     QL   G  V +T R         ++ +  G   V     D +  
Sbjct: 8   CVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPV-VCDSSQE 66

Query: 62  ATIHSLADFV-RSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           + + SL + V R Q G+LD+LVNNA     ++       F +                + 
Sbjct: 67  SEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPA------------SMW 114

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           +        G          L+  +    IV +SS   
Sbjct: 115 DDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS 152

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 88.5 bits (220), Expect = 5e-22
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 20/167 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
           AV+TG+  GIG    R LA  G  +VL        +  V +++      +V+ H  D+  
Sbjct: 28  AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK 87

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           P+ I  +   V  +FG  DILVNNA +  V          ++D    +W+ I        
Sbjct: 88  PSEIADMMAMVADRFGGADILVNNAGVQFVEK--------IEDFPVEQWDRI-------- 131

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
              +  N   S       IP ++     RI+N++S  G + + ++ A
Sbjct: 132 ---IAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSA 175

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 89.0 bits (221), Expect = 6e-22
 Identities = 32/185 (17%), Positives = 52/185 (28%), Gaps = 29/185 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGA K +G      L + G  V L   R           L     +S I  Q D+++
Sbjct: 49  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 108

Query: 61  PAT-----------------IHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKD 103
            AT                    L     + +G+ D+LVNNA+ F              +
Sbjct: 109 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-----YPTPLLRNDE 163

Query: 104 GEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP------RIVNVSSNM 157
                                 +N      + +     +  +          I+N+   M
Sbjct: 164 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 223

Query: 158 GKLKN 162
                
Sbjct: 224 TNQPL 228

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 88.4 bits (220), Expect = 6e-22
 Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 22/169 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTG  +GIG    R LA++G  + +T   D +     + +L   G   VIF + D+AD
Sbjct: 32  AIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR-VIFLRADLAD 90

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
            ++  +  D V ++FG++D LVNNA   G++         +K      ++ I        
Sbjct: 91  LSSHQATVDAVVAEFGRIDCLVNNA---GIASIVRDDFLDLKPEN---FDTI-------- 136

Query: 121 EKCLRTNYYGSKRMC-EVLIPLLQLSDLP--RIVNVSSNMGKLKNTWQG 166
              +  N  G+      VL  +L         I+N++S    + +  + 
Sbjct: 137 ---VGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERL 182

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 88.6 bits (220), Expect = 7e-22
 Identities = 32/185 (17%), Positives = 52/185 (28%), Gaps = 29/185 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGA K +G      L + G  V L   R           L     +S I  Q D+++
Sbjct: 12  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 71

Query: 61  PAT-----------------IHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKD 103
            AT                    L     + +G+ D+LVNNA+ F              +
Sbjct: 72  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-----YPTPLLRNDE 126

Query: 104 GEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP------RIVNVSSNM 157
                                 +N      + +     +  +          I+N+   M
Sbjct: 127 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 186

Query: 158 GKLKN 162
                
Sbjct: 187 TNQPL 191

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 87.5 bits (218), Expect = 7e-22
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA++GIG+E    LAS G  VV TA  +    +    +K  GF +     L+++D 
Sbjct: 8  ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGL-VLNISDI 66

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
           +I +    ++++   +DILVNNA I
Sbjct: 67 ESIQNFFAEIKAENLAIDILVNNAGI 92

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 88.0 bits (219), Expect = 8e-22
 Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 23/167 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGA++GIG     +LAS+G  VV+  A       E   K++ +G  ++   Q DV+D
Sbjct: 30  AIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTA-QADVSD 88

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           PA +  L       FG +D+LVNNA I                        I      + 
Sbjct: 89  PAAVRRLFATAEEAFGGVDVLVNNAGIM-------------------PLTTIAETGDAVF 129

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           ++ +  N  G+          L+     RI+N+S++   L +   G 
Sbjct: 130 DRVIAVNLKGTFNTLREAAQRLR--VGGRIINMSTSQVGLLHPSYGI 174

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 88.0 bits (219), Expect = 8e-22
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG     +LA  G +V+ TA  E          K +G +      L+V D 
Sbjct: 31  AIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGA-VLNVNDA 89

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAI 87
             + +L +    +FG L++LVNNA I
Sbjct: 90  TAVDALVESTLKEFGALNVLVNNAGI 115

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 87.6 bits (218), Expect = 8e-22
 Identities = 33/166 (19%), Positives = 54/166 (32%), Gaps = 30/166 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
             VTGA KGIGY T       G  V    +   +                    +DVAD 
Sbjct: 10  VWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFA-----------TEVMDVADA 58

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A +  +   + ++  +LD LVN A   G+   G      +   +   W           +
Sbjct: 59  AQVAQVCQRLLAETERLDALVNAA---GILRMGATDQ--LSKED---W-----------Q 99

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           +    N  G+  + +  +   +      IV V+S+          A
Sbjct: 100 QTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSA 145

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 88.0 bits (219), Expect = 8e-22
 Identities = 34/180 (18%), Positives = 59/180 (32%), Gaps = 35/180 (19%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG-------LEAVEKLKHSGFDSVIFH 54
             +TGA++GIG     + A +G  V + A+              A   +  +G   +   
Sbjct: 9   LFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLAL- 67

Query: 55  QLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT 114
           + D+ +   + +        FG +DILVNNA+                    I       
Sbjct: 68  KCDIREEDQVRAAVAATVDTFGGIDILVNNASA-------------------IWL----R 104

Query: 115 PTYELAEK----CLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
            T +   K      + N  GS    +  +P L  +  P I+ ++         W     Y
Sbjct: 105 GTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGY 164

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 87.6 bits (218), Expect = 9e-22
 Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 31/157 (19%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTGA+ GIG     +    G  V+  +  +    +                + DV +P
Sbjct: 11  VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY------------DHIECDVTNP 58

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +  D +  ++G + +LVNNA   G+   G                 I + +     
Sbjct: 59  DQVKASIDHIFKEYGSISVLVNNA---GIESYGK----------------IESMSMGEWR 99

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           + +  N +G     +  IP +  S  P IVN+SS   
Sbjct: 100 RIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQA 136

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 87.6 bits (218), Expect = 1e-21
 Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 22/156 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
            V+TG++ G+G     + A+    VV+     E      +E++K  G +  I  + DV  
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE-AIAVKGDVTV 68

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
            + + +L      +FGKLD+++NNA +     +    S  +   +   WN++        
Sbjct: 69  ESDVINLVQSAIKEFGKLDVMINNAGL-----ENPVSSHEMSLSD---WNKV-------- 112

Query: 121 EKCLRTNYYGSKRMC-EVLIPLLQLSDLPRIVNVSS 155
              + TN  G+     E +   ++      ++N+SS
Sbjct: 113 ---IDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 87.6 bits (218), Expect = 1e-21
 Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 25/157 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTGA  GIG   +   A  G  +V   R+E+   EAV  L+       I    DV+DP
Sbjct: 9   ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----AEAIAVVADVSDP 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + ++      +FG+L  + + A +        ALS  +       W ++         
Sbjct: 65  KAVEAVFAEALEEFGRLHGVAHFAGVA-----HSALSWNLPLEA---WEKV--------- 107

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
             LR N  GS  +      +L+      +V   S  G
Sbjct: 108 --LRVNLTGSFLVARKAGEVLEEGG--SLVLTGSVAG 140

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 87.2 bits (217), Expect = 1e-21
 Identities = 38/164 (23%), Positives = 63/164 (38%), Gaps = 22/164 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AV+TG   GIG     + A  G  + +         EA   +++ G   V+  + DV+ P
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRR-VLTVKCDVSQP 66

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +    V S FG+ DILVNNA I+            +   +   W +          
Sbjct: 67  GDVEAFGKQVISTFGRCDILVNNAGIY-----PLIPFDELTFEQ---WKKT--------- 109

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
                N      M +  +P ++ +   RI+N++S    LK    
Sbjct: 110 --FEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAY 151

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 86.8 bits (216), Expect = 1e-21
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 6/86 (6%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           ++TGA  GIG  T+   A  G  +V    +E    EA E +            +DVADP
Sbjct: 8  VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV------VMDVADP 61

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
          A++        +  G+LD +V+ A I
Sbjct: 62 ASVERGFAEALAHLGRLDGVVHYAGI 87

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 86.8 bits (216), Expect = 2e-21
 Identities = 23/86 (26%), Positives = 44/86 (51%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          ++VTG+ +GIG     +LAS G  V++T    +R     E++ +         ++++   
Sbjct: 10 SLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSE 69

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
           +I+   + + +    +DILVNNA I
Sbjct: 70 ESINKAFEEIYNLVDGIDILVNNAGI 95

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 86.8 bits (216), Expect = 2e-21
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG+ +G+G+     LA+ G  V+L         E+V+ L   G+D       DV D 
Sbjct: 12  ALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD-AHGVAFDVTDE 70

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDAL 97
             I +    + ++   +DIL+NNA   G+      +
Sbjct: 71  LAIEAAFSKLDAEGIHVDILINNA---GIQYRKPMV 103

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 86.1 bits (214), Expect = 2e-21
 Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 35/158 (22%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
            V+TGA+ G+G E  +   + G    LT R E + L  V   L     ++V +   D+A 
Sbjct: 4   IVITGASSGLGAELAKLYDAEGKATYLTGRSESK-LSTVTNCLS----NNVGYRARDLAS 58

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              +  L + +         +V++A        G    G +++ +P +   ++       
Sbjct: 59  HQEVEQLFEQL---DSIPSTVVHSA--------GSGYFGLLQEQDPEQIQTLI------- 100

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPR---IVNVSS 155
                 N   +  +   L+   +     +   +V + S
Sbjct: 101 ----ENNLSSAINVLRELVKRYK----DQPVNVVMIMS 130

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 86.8 bits (216), Expect = 2e-21
 Identities = 42/169 (24%), Positives = 63/169 (37%), Gaps = 23/169 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A VTGA  GIG E  R  A++G  ++L  R+      A ++L  +    +     DV D 
Sbjct: 14  AAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARI---VADVTDA 70

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + + A         + ILVN+A   G++   DAL     D     W ++         
Sbjct: 71  EAMTAAAAEA-EAVAPVSILVNSA---GIARLHDALE--TDDAT---WRQV--------- 112

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
             +  N  G           +       IVN+ S  G + N  Q A  Y
Sbjct: 113 --MAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSY 159

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 86.4 bits (215), Expect = 2e-21
 Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 24/162 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA +GIG     +LA++G  V+++  + +    A   +             D++DP
Sbjct: 9   ALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKA----RAIAADISDP 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            ++ +L   +++  G +DILVNNA+I             V       W +I         
Sbjct: 65  GSVKALFAEIQALTGGIDILVNNASI-----VPFVAWDDVDLDH---WRKI--------- 107

Query: 122 KCLRTNYYGSKRMC-EVLIPLLQLSDLPRIVNVSSNMGKLKN 162
             +  N  G+  +       +       R+++++SN      
Sbjct: 108 --IDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT 147

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 86.5 bits (215), Expect = 2e-21
 Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 20/167 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           AVVTG+  GIG      LA+ G  +VL    D     +    L       V++   D++ 
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK 66

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              +  L D    Q G++DILVNNA I   ++        ++D    KW+ I        
Sbjct: 67  GEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--------IEDFPTEKWDAI-------- 110

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
              L  N           +P ++     RI+N++S  G + +  + A
Sbjct: 111 ---LALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSA 154

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 87.0 bits (216), Expect = 2e-21
 Identities = 38/160 (23%), Positives = 62/160 (38%), Gaps = 26/160 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNGII---VVLTARDEKRGLEAV--EKLKHSGFDSVIFHQL 56
            ++TGA+ GIG  T  +          ++L AR  ++ LE +     +      V   QL
Sbjct: 36  VLITGASAGIGKATALEYLEASNGDMKLILAARRLEK-LEELKKTIDQEFPNAKVHVAQL 94

Query: 57  DVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDAL-SGFVKDGEPIKWNEIVTP 115
           D+     I    + +  +F  +DILVNNA        G AL S  V         ++   
Sbjct: 95  DITQAEKIKPFIENLPQEFKDIDILVNNA--------GKALGSDRVGQIATEDIQDVFD- 145

Query: 116 TYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                     TN      + + ++P+ Q  +   IVN+ S
Sbjct: 146 ----------TNVTALINITQAVLPIFQAKNSGDIVNLGS 175

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 86.2 bits (214), Expect = 2e-21
 Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 1/88 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +   A  GIG +T R+L    +   +     +      E    +   ++ FH  DV  P
Sbjct: 8  VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVP 67

Query: 62 -ATIHSLADFVRSQFGKLDILVNNAAIF 88
           A    L   +  Q   +DIL+N A I 
Sbjct: 68 VAESKKLLKKIFDQLKTVDILINGAGIL 95

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 86.2 bits (214), Expect = 3e-21
 Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 45/158 (28%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            V++G   GIG  T + L + G  +V     +      V                D++  
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRD----AEV--------------IADLSTA 45

Query: 62  ATI-HSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
                ++AD +      +D LV  A +                           P  ++ 
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGL--------------------------GPQTKVL 79

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
              +  NY+G+  + +  +P L+    P  V +SS   
Sbjct: 80  GNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS 117

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 86.0 bits (214), Expect = 3e-21
 Identities = 22/166 (13%), Positives = 43/166 (25%), Gaps = 23/166 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VT A    G   V  L  +G  VV          E       +               
Sbjct: 4   ALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENP-------GTIALAE 56

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                L D        +D +V+N  I             ++        ++         
Sbjct: 57  QKPERLVDATLQHGEAIDTIVSNDYI-----PRPMNRLPLEGTSEADIRQM--------- 102

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
                       + +  I  L+ +    ++ ++S++GK    +   
Sbjct: 103 --FEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPL 146

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 86.5 bits (215), Expect = 3e-21
 Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 23/161 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+ TGA +GIG     +L   G  VV+      K   E V +LK  G   V   Q D++ 
Sbjct: 24  ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI-QADISK 82

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           P+ + +L D   S FG LD +++N+ +                     W + +  T EL 
Sbjct: 83  PSEVVALFDKAVSHFGGLDFVMSNSGME-------------------VWCDELEVTQELF 123

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLK 161
           +K    N  G   + +  +   +     RI+  SS    + 
Sbjct: 124 DKVFNLNTRGQFFVAQQGLKHCR--RGGRIILTSSIAAVMT 162

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 86.4 bits (215), Expect = 3e-21
 Identities = 41/172 (23%), Positives = 65/172 (37%), Gaps = 22/172 (12%)

Query: 2   AVVTGA--NKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDV 58
            VVTGA   KG+G E  R  A  G  V +T A   +   E V++L+ +       ++  V
Sbjct: 23  VVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQV 82

Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
               +   L   V + FG++D  + NA   G + D   L     DG    WN +V     
Sbjct: 83  DSYESCEKLVKDVVADFGQIDAFIANA---GATADSGIL-----DGSVEAWNHVVQ---- 130

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
                   +  G+    + +    +      +V  +S  G + N  Q    Y
Sbjct: 131 -------VDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSY 175

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 85.7 bits (213), Expect = 3e-21
 Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 33/157 (21%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG +KGIG   V  L  N    V+    ++              +++ F + D+   
Sbjct: 7   YLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA----------ENLKFIKADLTKQ 56

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I ++ D ++      D +  NA   G+ + G      ++        ++         
Sbjct: 57  QDITNVLDIIK--NVSFDGIFLNA---GILIKGSIFDIDIES-----IKKV--------- 97

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
             L  N + S    + L   L++     IV   S+  
Sbjct: 98  --LDLNVWSSIYFIKGLENNLKVGA--SIVFNGSDQC 130

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 86.1 bits (214), Expect = 3e-21
 Identities = 38/160 (23%), Positives = 60/160 (37%), Gaps = 23/160 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A VTG ++GIG    ++LA  G  V LT     +R    V +++ +G  +V   + D  D
Sbjct: 34  AFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAI-RADNRD 92

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              I           G LDILVN+A I+                       +   T    
Sbjct: 93  AEAIEQAIRETVEALGGLDILVNSAGIW-------------------HSAPLEETTVADF 133

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
           ++ +  N+             L   D  RI+ + SN+ +L
Sbjct: 134 DEVMAVNFRAPFVAIRSASRHLG--DGGRIITIGSNLAEL 171

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 86.5 bits (215), Expect = 4e-21
 Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 24/174 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           AVVTGA K IG     +L   G  VV+      +  +   ++L     ++ +  Q D+ +
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN 85

Query: 61  ----PATIHSLADFVRSQFGKLDILVNNAAIF--GVSVDGDALSGFVKDGEPIKWNEIVT 114
               PA+   + +     FG+ D+LVNNA+ F     V GD            +  E+  
Sbjct: 86  SNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAEL-- 143

Query: 115 PTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP------RIVNVSSNMGKLKN 162
                    + TN      +        + ++         IVN+   M     
Sbjct: 144 ---------IGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPC 188

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 86.1 bits (214), Expect = 4e-21
 Identities = 24/84 (28%), Positives = 43/84 (51%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++T   KG+G +   +L + G  V +T   +   +E +++      + + F Q DV   
Sbjct: 10 ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK 69

Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
            +H + +   S FGK+D L+NNA
Sbjct: 70 EDLHKIVEEAMSHFGKIDFLINNA 93

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 86.1 bits (214), Expect = 4e-21
 Identities = 48/170 (28%), Positives = 67/170 (39%), Gaps = 23/170 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
            +VTG ++GIG    R  A  G  V +  A + +     V  +  SG ++V     DV +
Sbjct: 29  VLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAI-PGDVGN 87

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
            A I ++   V  QFG+LD LVNNA I    VD       +          +        
Sbjct: 88  AADIAAMFSAVDRQFGRLDGLVNNAGI----VDYPQRVDEMSVER---IERM-------- 132

Query: 121 EKCLRTNYYGSKRMC-EVLIPLLQLSDLP--RIVNVSSNMGKLKNTWQGA 167
              LR N  GS     E +  + +L       IVNVSS    L +  Q  
Sbjct: 133 ---LRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYV 179

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 87.1 bits (216), Expect = 4e-21
 Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 26/171 (15%)

Query: 2   AVVTGANKGIGYETVRQLASN---GIIVVLTARDEKRG--LEAVEKLKHSGFDSVIFHQL 56
            ++TG + GIG     +LAS+      V  T RD K    L    +       S+   QL
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 57  DVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPT 116
           DV D  ++ +  + V    G++D+LV NA +         L G ++              
Sbjct: 65  DVRDSKSVAAARERVT--EGRVDVLVCNAGL--------GLLGPLEAL-----------G 103

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
            +     L  N  G+ RM +  +P ++     R++   S  G +   +   
Sbjct: 104 EDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDV 154

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 85.2 bits (212), Expect = 5e-21
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
          A++TGA++GIG     +LA +G  + +   ++ ++  E  E+ +  G   V     ++ +
Sbjct: 4  ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
               +L        G LD LVNNA I
Sbjct: 64 AEAATALVHQAAEVLGGLDTLVNNAGI 90

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 85.3 bits (212), Expect = 6e-21
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TG+ +GIG          G  V +   D +R  +A  ++  +        Q+DV   
Sbjct: 11 ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPA----AYAVQMDVTRQ 66

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFGV 90
           +I +         G LDILVNNAA+F +
Sbjct: 67 DSIDAAIAATVEHAGGLDILVNNAALFDL 95

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 84.9 bits (211), Expect = 7e-21
 Identities = 32/154 (20%), Positives = 60/154 (38%), Gaps = 28/154 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AVVTGA  G+G E V+ L+ +  IV    R+ +  L A+ ++     + V   + D+   
Sbjct: 8   AVVTGATGGMGIEIVKDLSRDH-IVYALGRNPEH-LAALAEI-----EGVEPIESDIVKE 60

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                  D ++     +D LV+ A          A    ++ G   +W+           
Sbjct: 61  VLEEGGVDKLK-NLDHVDTLVHAA--------AVARDTTIEAGSVAEWHAH--------- 102

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
             L  N      +   L+P L+ +    ++ ++S
Sbjct: 103 --LDLNVIVPAELSRQLLPALRAAS-GCVIYINS 133

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 85.4 bits (212), Expect = 1e-20
 Identities = 36/162 (22%), Positives = 63/162 (38%), Gaps = 23/162 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGA +GIG E   +L   G  V++  A   +   E V  +K +G D+    + +V  
Sbjct: 32  ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACV-KANVGV 90

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              I  + +     FGKLDI+ +N+ +                     +  +   T E  
Sbjct: 91  VEDIVRMFEEAVKIFGKLDIVCSNSGVV-------------------SFGHVKDVTPEEF 131

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKN 162
           ++    N  G   +       L+     R++ + S  G+ K 
Sbjct: 132 DRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSITGQAKA 171

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 83.4 bits (207), Expect = 1e-20
 Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 35/166 (21%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TGA  G+G    R L   G  ++L+ R      E   ++             D+AD 
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVGARAL------PADLADE 54

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
               +L +    + G LD+LV+     G +                          +L E
Sbjct: 55  LEAKALLE----EAGPLDLLVHAV---GKAGRASVREAGR----------------DLVE 91

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           + L  +   +      ++   +     R V   +    ++     A
Sbjct: 92  EMLAAHLLTAAF----VLKHARFQKGARAVFFGAYPRYVQVPGFAA 133

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 84.1 bits (209), Expect = 2e-20
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 22/167 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
            VV GA + IG     + A  G  VVLT     +    AV +++  G  ++   + D+ +
Sbjct: 11  IVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI-KADLTN 69

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
            A + +       +FG++  LV+ A      +        + +     W+++        
Sbjct: 70  AAEVEAAISAAADKFGEIHGLVHVAGG----LIARKTIAEMDEAF---WHQV-------- 114

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
              L  N        +  +P +       IV  SS  G+        
Sbjct: 115 ---LDVNLTSLFLTAKTALPKMAKGG--AIVTFSSQAGRDGGGPGAL 156

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 83.7 bits (208), Expect = 2e-20
 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK-LKHSGFDSVIFHQLDVAD 60
          A+VTG+++G+G     +L + G  +VL        L+A  +  K +G + V+  + DV +
Sbjct: 8  AIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVA-KGDVKN 66

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
          P  + ++       FG++DILVNNA I
Sbjct: 67 PEDVENMVKTAMDAFGRIDILVNNAGI 93

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 84.1 bits (209), Expect = 2e-20
 Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG ++G+G+   + LA  G  VV+ +R+ +   EA +KL        +  + DV++ 
Sbjct: 24  ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY 83

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDAL 97
             +  L + V+ +FGKLD +VN A   G++    A 
Sbjct: 84  EEVKKLLEAVKEKFGKLDTVVNAA---GINRRHPAE 116

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 83.7 bits (208), Expect = 2e-20
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A VTG   GIG    ++L  +G  VV     +  R ++ +E  K  GFD     + +V D
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS-EGNVGD 74

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAI 87
             +     D V+++ G++D+LVNNA I
Sbjct: 75  WDSTKQAFDKVKAEVGEIDVLVNNAGI 101

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 83.3 bits (207), Expect = 2e-20
 Identities = 35/160 (21%), Positives = 55/160 (34%), Gaps = 29/160 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++T A +GIG       A  G  V+ T  +E +  E  +         +    LDV   
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG------IQTRVLDVTKK 62

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I   A+    +  +LD+L N A   G    G  L    KD     W           +
Sbjct: 63  KQIDQFAN----EVERLDVLFNVA---GFVHHGTVLDCEEKD-----W-----------D 99

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLK 161
             +  N      M +  +P +       I+N+SS    +K
Sbjct: 100 FSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK 139

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 83.4 bits (207), Expect = 3e-20
 Identities = 23/172 (13%), Positives = 47/172 (27%), Gaps = 37/172 (21%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VT      G  +  +L+  G  V       K   + +E    +        QL     
Sbjct: 4   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFK-QKDELEAFAETYP------QLKPMSE 56

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIK------WNEIVTP 115
                L + V S +G++D+LV+N                  + +PI       +      
Sbjct: 57  QEPAELIEAVTSAYGQVDVLVSNDIF-------------APEFQPIDKYAVEDYRGA--- 100

Query: 116 TYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
                   +         +   +   ++      I+ ++S            
Sbjct: 101 --------VEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELST 144

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 83.8 bits (208), Expect = 3e-20
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTG+ +GIG      L   G  VV+  A   K   + V ++K  G D++   + D+  
Sbjct: 21  ALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI-KADIRQ 79

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIF 88
              I  L D   + FG LDI V+N+ + 
Sbjct: 80  VPEIVKLFDQAVAHFGHLDIAVSNSGVV 107

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 83.3 bits (207), Expect = 3e-20
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT---ARDEKRGLEAVEKLKHSGFDSVIFHQLDV 58
            V+ G  K +G  T +  A   + +VL    A+D     +  ++L+  G    ++ Q D+
Sbjct: 14  IVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY-QSDL 72

Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAI 87
           ++   +  L DF   +FGK+DI +N    
Sbjct: 73  SNEEEVAKLFDFAEKEFGKVDIAINTVGK 101

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 83.8 bits (208), Expect = 3e-20
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK-LKHSGFDSVIFHQLDVAD 60
           A VTG   G+G    R+L   G+ V ++  +    +       + +G D   +  +DVAD
Sbjct: 28  AFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAY-AVDVAD 86

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAI 87
             +    A+ V + FGK+D+L+NNA I
Sbjct: 87  FESCERCAEKVLADFGKVDVLINNAGI 113

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 83.0 bits (206), Expect = 5e-20
 Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 23/169 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT--ARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
           A+VTG  +GIG     +LA++G  + +    + E++  E ++ ++ +     +F  LDV 
Sbjct: 5   AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK-AVFVGLDVT 63

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           D A   S  D    + G  D+LVNNA I  +                     ++  T E 
Sbjct: 64  DKANFDSAIDEAAEKLGGFDVLVNNAGIAQI-------------------KPLLEVTEED 104

Query: 120 AEKCLRTNYYGSKRMC-EVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
            ++    N +              +L    +I+N +S           A
Sbjct: 105 LKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSA 153

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 82.5 bits (205), Expect = 6e-20
 Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
          A+VTGA++GIG      LA  G  VV+  A +E++  E V+++K  G D++   + DVA+
Sbjct: 7  ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAV-RADVAN 65

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
             + ++       FG++DILVNNA +
Sbjct: 66 AEDVTNMVKQTVDVFGQVDILVNNAGV 92

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 82.1 bits (204), Expect = 7e-20
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
          A+VTGA++GIG     QLA  G  V +  A  +++    VE++K  G DS    Q +VAD
Sbjct: 7  ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI-QANVAD 65

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
             + ++   V SQFG LD+LVNNA I
Sbjct: 66 ADEVKAMIKEVVSQFGSLDVLVNNAGI 92

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 82.2 bits (204), Expect = 1e-19
 Identities = 35/173 (20%), Positives = 71/173 (41%), Gaps = 29/173 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGA++GIG    ++LA++G +V +     ++   E V +++ +G  +      ++  
Sbjct: 10  ALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSI-GANLES 68

Query: 61  PATIHSLADFVRSQF------GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT 114
              + +L   + ++        K DIL+NNA I                        I  
Sbjct: 69  LHGVEALYSSLDNELQNRTGSTKFDILINNAGIG-------------------PGAFIEE 109

Query: 115 PTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
            T +  ++ +  N      + +  +  L+  D  RI+N+SS   ++      A
Sbjct: 110 TTEQFFDRMVSVNAKAPFFIIQQALSRLR--DNSRIINISSAATRISLPDFIA 160

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 81.8 bits (203), Expect = 1e-19
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           VVTGA++GIG      L   G  V++  AR  K   E  ++++  G  ++ F   DV+ 
Sbjct: 4  VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITF-GGDVSK 62

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAI 87
           A + ++       +G +D++VNNA I
Sbjct: 63 EADVEAMMKTAIDAWGTIDVVVNNAGI 89

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 82.2 bits (204), Expect = 1e-19
 Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 27/169 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS------VIFHQ 55
           A+VTGA  GIG     +LA  G  V     D     E V  L   G             Q
Sbjct: 10  ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQ 69

Query: 56  LDVADPATIHSLADFVRSQFGK-LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT 114
            DV++      L + V++ F +   ++V+ A   G++ D   L   + + +   W+++  
Sbjct: 70  ADVSEARAARCLLEQVQACFSRPPSVVVSCA---GITQDEFLLH--MSEDD---WDKV-- 119

Query: 115 PTYELAEKCLRTNYYGSKRMC-EVLIPLLQLSDLPRIVNVSSNMGKLKN 162
                    +  N  G+  +       L+       I+N+SS +GK+ N
Sbjct: 120 ---------IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN 159

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 81.8 bits (203), Expect = 1e-19
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA++GIG      LA  G  V+ TA  E       + L     D+     L+V +P
Sbjct: 12 ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----DNGKGMALNVTNP 67

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
           +I ++   +  +FG +DILVNNA I
Sbjct: 68 ESIEAVLKAITDEFGGVDILVNNAGI 93

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 81.8 bits (203), Expect = 1e-19
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTGA++GIG     +LA+ G  V +  A       E V  +  +G ++    + DV+ 
Sbjct: 31  ALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAV-KADVSQ 89

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAI 87
            + + +L   V  ++G+LD+LVNNA I
Sbjct: 90  ESEVEALFAAVIERWGRLDVLVNNAGI 116

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 81.4 bits (202), Expect = 1e-19
 Identities = 36/158 (22%), Positives = 55/158 (34%), Gaps = 29/158 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTGA KGIG  TV+ L + G  VV  +R +      V +        +    +D+ D 
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDW 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                         G +D+LVNNA    V++    L     +     ++           
Sbjct: 65  EATERALG----SVGPVDLLVNNA---AVALLQPFL-----EVTKEAFDRS--------- 103

Query: 122 KCLRTNYYGSKRMC-EVLIPLLQLSDLPRIVNVSSNMG 158
                N     ++   V   L+       IVNVSS   
Sbjct: 104 --FEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS 139

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 81.0 bits (201), Expect = 2e-19
 Identities = 35/158 (22%), Positives = 57/158 (36%), Gaps = 29/158 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA KGIG +TV+ L ++G  VV   R     +   ++        +    +D+ D 
Sbjct: 10  ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVCVDLGDW 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                         G +D+LVNNA    + +    L   V       ++           
Sbjct: 65  DATEKALG----GIGPVDLLVNNA---ALVIMQPFLE--VTKEA---FDRS--------- 103

Query: 122 KCLRTNYYGSKRMC-EVLIPLLQLSDLPRIVNVSSNMG 158
                N     ++   V   ++       IVNVSS + 
Sbjct: 104 --FSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVA 139

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 81.0 bits (201), Expect = 3e-19
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA  GIG    R   + G IV L    E    + ++++       V     +++D 
Sbjct: 30  ALVTGATGGIGEAIARCFHAQGAIVGLHGTRE----DKLKEIAADLGKDVFVFSANLSDR 85

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAI 87
            +I  LA+    +   +DILVNNA I
Sbjct: 86  KSIKQLAEVAEREMEGIDILVNNAGI 111

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 80.0 bits (198), Expect = 9e-19
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 24/160 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+V+G   G+G  TVR+L ++G+ VV+     ++G    ++L     +   F   +V   
Sbjct: 33  AIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG----NRAEFVSTNVTSE 88

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            ++ +  +           +V +         G A     +DG P               
Sbjct: 89  DSVLAAIEAANQLGRLRYAVVAHGGF------GVAQRIVQRDGSPA--------DMGGFT 134

Query: 122 KCLRTN----YYGSKRMCEVLIPLLQLSDLPR--IVNVSS 155
           K +       Y  ++ +   +       +  R  +V  +S
Sbjct: 135 KTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTAS 174

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 79.2 bits (196), Expect = 2e-18
 Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 23/160 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AV+TG   G+G  T  +L   G   VL       G    +KL     ++ +F   DV   
Sbjct: 15  AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSE 70

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +     + +FG++D+ VN A   G++V     +  +K G+          T E  +
Sbjct: 71  KDVQTALALAKGKFGRVDVAVNCA---GIAVASKTYN--LKKGQTH--------TLEDFQ 117

Query: 122 KCLRTNYYGSKRMC----EVLIPLLQLSDLPR--IVNVSS 155
           + L  N  G+  +       +          R  I+N +S
Sbjct: 118 RVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS 157

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 78.4 bits (194), Expect = 2e-18
 Identities = 35/165 (21%), Positives = 60/165 (36%), Gaps = 35/165 (21%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +V  A++GIG      L+  G  V + AR+E       E LK SG      H+  V D 
Sbjct: 22  VLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRSG------HRYVVCD- 67

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +    D +  +  ++DILV NA             G  K G   +         E  +
Sbjct: 68  --LRKDLDLLFEKVKEVDILVLNA-------------GGPKAGFFDELTN------EDFK 106

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQG 166
           + + + +    ++    +P ++     RIV ++S           
Sbjct: 107 EAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLY 151

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 78.8 bits (195), Expect = 2e-18
 Identities = 38/166 (22%), Positives = 60/166 (36%), Gaps = 22/166 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AVVTGA  GIG       A  G  V+   R +    E  +++   G         D+AD 
Sbjct: 34  AVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGS-AEAVVADLADL 91

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
               ++A+ + +   ++D+LVNNA   G+     A    V  G    W E+         
Sbjct: 92  EGAANVAEEL-AATRRVDVLVNNA---GIIARAPAEE--VSLGR---WREV--------- 133

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
             L  N   +  +       +      RIV ++S +         A
Sbjct: 134 --LTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAA 177

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 79.3 bits (196), Expect = 5e-18
 Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 28/157 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAV-EKLKHSGFDSVIFHQLDVA 59
           AVVTGA +GIG       A +G  VV    D     L+ V +K+  +         LDV 
Sbjct: 216 AVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTAL------TLDVT 269

Query: 60  DPATIHSLADFVRSQFG-KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYE 118
               +  +   V    G K+DILVNNA   G++ D   L   + +     W+ +      
Sbjct: 270 ADDAVDKITAHVTEHHGGKVDILVNNA---GITRDK--LLANMDEKR---WDAV------ 315

Query: 119 LAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
                +  N    +R+ E L+    + +  R++ +SS
Sbjct: 316 -----IAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSS 347

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 77.3 bits (191), Expect = 6e-18
 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +VTGA+ G+G    R LA  G  V+        G E   +L      +V F   DV + 
Sbjct: 10 FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG----AAVRFRNADVTNE 65

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDG 94
          A   +   F + +FG +  LVN A   G +   
Sbjct: 66 ADATAALAFAKQEFGHVHGLVNCA---GTAPGE 95

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 76.8 bits (190), Expect = 7e-18
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 12/86 (13%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +VTG N+GIG    ++LA++G  V +T R                       ++DV D 
Sbjct: 18 VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGV------------EVDVTDS 65

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            +      V    G +++LV+NA +
Sbjct: 66 DAVDRAFTAVEEHQGPVEVLVSNAGL 91

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 76.4 bits (189), Expect = 1e-17
 Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 29/169 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG ++GIG      L + G  V + +R+ +   +++           +    D+ + 
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG---------AVPLPTDL-EK 54

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                L        G L +LV+ A    V+V   AL   +   E   W  +         
Sbjct: 55  DDPKGLVKRALEALGGLHVLVHAA---AVNVRKPALE--LSYEE---WRRV--------- 97

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
             L  +   +  + +   P +  +   R++ + S              Y
Sbjct: 98  --LYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAY 144

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 76.4 bits (189), Expect = 1e-17
 Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 12/86 (13%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +VTG N+GIG    R  A  G  V +T R  +     +              + D+ D 
Sbjct: 24 VLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFL------AV------KCDITDT 71

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            +      +    G +++L+ NA +
Sbjct: 72 EQVEQAYKEIEETHGPVEVLIANAGV 97

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 75.2 bits (186), Expect = 3e-17
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          +++TGA+ GIG    R L   G  V+++  +E++       LK    D+      ++A+ 
Sbjct: 17 SLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANK 72

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
              +L      +   LDILV NA I
Sbjct: 73 EECSNLIS----KTSNLDILVCNAGI 94

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 71.6 bits (176), Expect = 7e-16
 Identities = 15/159 (9%), Positives = 39/159 (24%), Gaps = 33/159 (20%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +V G    +G   +     NG  V+          ++            I    +    
Sbjct: 6   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSN-----------ILVDGNKNWT 54

Query: 62  ATIHSLADFVRS--QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
               S+ +   S  Q  ++D +   A  +                             + 
Sbjct: 55  EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDF------------------VKN 96

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
           A+  ++ + + S    ++    L+      +    +   
Sbjct: 97  ADLMIKQSVWSSAIAAKLATTHLKPGG--LLQLTGAAAA 133

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 71.1 bits (175), Expect = 2e-15
 Identities = 33/169 (19%), Positives = 58/169 (34%), Gaps = 36/169 (21%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT------------ARDEKRGLEAVEKLKHSGFD 49
            +VTG  +G G     +LA  G  ++L                 +   EA  +++ +G  
Sbjct: 13  VLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-R 71

Query: 50  SVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKW 109
                ++DV D A +        ++FGKLD++V NA   G+   G  L           +
Sbjct: 72  KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANA---GICPLGAHLP-------VQAF 121

Query: 110 NEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
            +               ++ G        +P   L+    I+   S  G
Sbjct: 122 ADA-----------FDVDFVGVINTVHAALP--YLTSGASIITTGSVAG 157

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 70.3 bits (173), Expect = 4e-15
 Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 17/113 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT----------------ARDEKRGLEAVEKLKH 45
           A VTGA +G G     +LA  G  ++                  A   +   E  + +K 
Sbjct: 14  AFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG 73

Query: 46  SGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALS 98
                ++  ++DV D   + +  D    Q G+LDI+V NA I       D  S
Sbjct: 74  HNRR-IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTS 125

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 69.9 bits (172), Expect = 4e-15
 Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 37/170 (21%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL------------EAVEKLKHSGFD 49
           A +TGA +G G     +LA++G  ++     ++                 V+ ++  G  
Sbjct: 16  AFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSR 75

Query: 50  SVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKW 109
            ++  Q DV D  ++ +       + G+LDI+V NA I  +S   D             W
Sbjct: 76  -IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDG------------W 122

Query: 110 NEIVTPTYELAEKCLRTNYYGSKRMCEVLIP-LLQLSDLPRIVNVSSNMG 158
           +++           +  N  G     +V IP L++      IV +SS+ G
Sbjct: 123 HDV-----------IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG 161

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 69.3 bits (170), Expect = 5e-15
 Identities = 15/157 (9%), Positives = 37/157 (23%), Gaps = 29/157 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +V G    +G   V+   +    V      E     A   +K +             + 
Sbjct: 10  VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTD---------SFTEQ 60

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A   +          K+D ++  A  +                     N      ++  +
Sbjct: 61  ADQVTAEVGKLLGDQKVDAILCVAGGWAGG------------------NAKSKSLFKNCD 102

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG 158
              + + + S     +    L+      +    +   
Sbjct: 103 LMWKQSIWTSTISSHLATKHLKEGG--LLTLAGAKAA 137

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 69.5 bits (171), Expect = 5e-15
 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 14/99 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-------------ARDEKRGLEAVEKLKHSGF 48
           A +TGA +G G     +LA+ G  ++                   +   E    ++  G 
Sbjct: 18  AFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG- 76

Query: 49  DSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAI 87
              +   LDV D A +  L      QFG+LD++V NA +
Sbjct: 77  RKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGV 115

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 69.5 bits (171), Expect = 6e-15
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 14/102 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNG--IIVV-----------LTARDEKRGLEAVEKLKHSGF 48
           A +TGA +G G     ++A+ G  II V                     E V  ++ +  
Sbjct: 14  AFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN- 72

Query: 49  DSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGV 90
             ++   +D  D   +  + D   +  G+LDI+V NA +   
Sbjct: 73  RRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAP 114

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 69.2 bits (170), Expect = 9e-15
 Identities = 40/179 (22%), Positives = 66/179 (36%), Gaps = 32/179 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT------------ARDEKRGLEAVEKLKHSGFD 49
           A +TGA +G G      LA  G  ++                      E V +++  G  
Sbjct: 31  AFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-R 89

Query: 50  SVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKW 109
            +I  Q+DV D   + +  D   +Q G+LDI++ NA    ++ +G  L+      +P  W
Sbjct: 90  RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANA---ALASEGTRLN----RMDPKTW 142

Query: 110 NEIVTPTYELAEKCLRTNYYGSKRMCEVLIP-LLQLSDLPRIVNVSSNMGKLKNTWQGA 167
            ++           +  N  G+     V IP ++       IV  SS  G       G 
Sbjct: 143 RDM-----------IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGN 190

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 68.0 bits (167), Expect = 2e-14
 Identities = 24/171 (14%), Positives = 49/171 (28%), Gaps = 23/171 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL--KHSGFDSVIFHQLDVA 59
             +TG+  GIG      LA  G  V+   R +      +     + +   +V+     V 
Sbjct: 4   IAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVL 63

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           D   +      V +    L + VN   +  +    D L+  +  G+       V      
Sbjct: 64  DGL-VCCAGVGVTAANSGLVVAVNYFGVSALL---DGLAEALSRGQ---QPAAV------ 110

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
                      + +     +P+++               +     Q  + Y
Sbjct: 111 -----IVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQ---QGQTHLAY 153

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 65.8 bits (161), Expect = 6e-14
 Identities = 21/168 (12%), Positives = 47/168 (27%), Gaps = 44/168 (26%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++ GA+  +G     +L      V+   R        V               +D+ + 
Sbjct: 6   ILLIGASGTLGSAVKERLEKKA-EVITAGRHS----GDV--------------TVDITNI 46

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
            +I  + +    Q GK+D +V+                         ++ +   T E   
Sbjct: 47  DSIKKMYE----QVGKVDAIVSATGS-------------------ATFSPLTELTPEKNA 83

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
             + +   G   +  + I    L+D       +  M +       +  
Sbjct: 84  VTISSKLGGQINLVLLGIDS--LNDKGSFTLTTGIMMEDPIVQGASAA 129

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 65.7 bits (161), Expect = 2e-13
 Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 16/108 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNG--IIVVLTARD----------EKRGLEAVEKLKHSGFD 49
           A +TGA +G G     +LA +G  I+ +   R            +   E V  ++  G  
Sbjct: 49  AFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR 108

Query: 50  SVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDAL 97
            +I  Q DV D A++ ++ D   ++FG +DILV+N    G+S  G+ +
Sbjct: 109 -IIARQADVRDLASLQAVVDEALAEFGHIDILVSNV---GISNQGEVV 152

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 64.9 bits (159), Expect = 3e-13
 Identities = 38/156 (24%), Positives = 56/156 (35%), Gaps = 23/156 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKL-KHSGFDSVIFHQLDVA 59
           A+VTG + GIG       A  G  V +     E+   + V+ L +  G  +V+    D++
Sbjct: 52  ALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLL-PGDLS 110

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           D +   SL    R   G LDIL   A                         EI   T E 
Sbjct: 111 DESFARSLVHKAREALGGLDILALVAGK------------------QTAIPEIKDLTSEQ 152

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
            ++    N +    + +  IPLL       I+  SS
Sbjct: 153 FQQTFAVNVFALFWITQEAIPLLPKGA--SIITTSS 186

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 64.5 bits (158), Expect = 4e-13
 Identities = 41/178 (23%), Positives = 67/178 (37%), Gaps = 32/178 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNG--IIVVLTARD----------EKRGLEAVEKLKHSGFD 49
           A++TG  +G+G      LA  G  I +     +               E V  ++ +G  
Sbjct: 13  ALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG-R 71

Query: 50  SVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKW 109
             I  ++DV D A + S         G +DI + NA   G+S         V+  +   W
Sbjct: 72  RCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNA---GISTIALLPE--VESAQ---W 123

Query: 110 NEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           +E++            TN  G+      + P +   +  RIV VSS +G   N  Q +
Sbjct: 124 DEVIG-----------TNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQAS 170

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 64.2 bits (157), Expect = 4e-13
 Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          AVVTG   G+G  T ++L   G  VV+     +  +  +        D   F   DV D 
Sbjct: 12 AVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLG-------DRARFAAADVTDE 64

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
          A + S  D      G L I+VN A  
Sbjct: 65 AAVASALDLAE-TMGTLRIVVNCAGT 89

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 64.5 bits (158), Expect = 5e-13
 Identities = 33/155 (21%), Positives = 55/155 (35%), Gaps = 22/155 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL-KHSGFDSVIFHQLDVAD 60
            ++TG + GIG       A  G  + +   DE+      ++  +  G   V+    D++D
Sbjct: 50  VLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLL-PGDLSD 108

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
                 +      Q G L+ILVNN A                         +   T E  
Sbjct: 109 EQHCKDIVQETVRQLGSLNILVNNVAQ------------------QYPQQGLEYITAEQL 150

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           EK  R N +    + +  +  L+  D   I+N +S
Sbjct: 151 EKTFRINIFSYFHVTKAALSHLKQGD--VIINTAS 183

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 63.0 bits (154), Expect = 8e-13
 Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 14/86 (16%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTG   G+G      L + G  VV+     +                +I+ + DV   
Sbjct: 5  ALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------------DLIYVEGDVTRE 51

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAI 87
            +       + +   L  +V+ A +
Sbjct: 52 EDVRRAVARAQ-EEAPLFAVVSAAGV 76

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 58.5 bits (142), Expect = 6e-11
 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVV----------LTARDEKRGLEAVEKLKHSGFDSV 51
            +VTGA  GIG       A+ G  VV            A         V+++  +G ++V
Sbjct: 30  VIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAV 89

Query: 52  IFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAI 87
                +VAD      L       FG LD+LVNNA I
Sbjct: 90  A-DGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI 124

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 57.2 bits (138), Expect = 2e-10
 Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 10/91 (10%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AVV      +G  +   LA  G  VVL  R   +   A + +       V     + AD 
Sbjct: 122 AVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETADD 179

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSV 92
           A+                 +    AI G+ +
Sbjct: 180 ASRAEA-------VKGAHFVFTAGAI-GLEL 202

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 53.5 bits (129), Expect = 5e-09
 Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 32/173 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVL---------TARDEKRGLEAVEKLKHSGFDSVI 52
            ++TGA  G+G     + A  G  VV+            + K     V+++  +G  +V 
Sbjct: 11  VIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVA 70

Query: 53  FHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEI 112
               D  +      + +     FG + +++NNA I       DA    + + +   +  +
Sbjct: 71  ----DYNNVLDGDKIVETAVKNFGTVHVIINNAGIL-----RDASMKKMTEKD---YKLV 118

Query: 113 VTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
                      +  +  G+  + +   P  Q     RIVN SS  G   N  Q
Sbjct: 119 -----------IDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQ 160

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 44.3 bits (105), Expect = 6e-06
 Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 24/164 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TGA  G+G E  +  A  G  VV+   D K   + V+++K +G ++    Q DVA  
Sbjct: 325 VLITGAGAGLGKEYAKWFAKYGAKVVVN--DFKDATKTVDEIKAAGGEAWP-DQHDVAKD 381

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           +   ++   V  ++G +DILVNNA             G ++D    K ++      +  +
Sbjct: 382 S--EAIIKNVIDKYGTIDILVNNA-------------GILRDRSFAKMSK------QEWD 420

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
              + +  G+  +  +  P        RI+N++S  G   N  Q
Sbjct: 421 SVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQ 464

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 52.9 bits (127), Expect = 9e-09
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 32/174 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVL---------TARDEKRGLEAVEKLKHSGFDSVI 52
           AVVTGA  G+G E     A  G  VV+             ++     V++++ +G ++V 
Sbjct: 22  AVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVA 81

Query: 53  FHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEI 112
                V D A +   A      FG++DILVNNA             G ++D        +
Sbjct: 82  -DYNSVIDGAKVIETA---IKAFGRVDILVNNA-------------GILRDRS------L 118

Query: 113 VTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQG 166
           V  + +        +  GS +  +   P ++  +  RI+  SSN G   N  Q 
Sbjct: 119 VKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQV 172

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 32/173 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVL---------TARDEKRGLEAVEKLKHSGFDSVI 52
            +VTGA  G+G       A  G +VV+           +      + VE+++  G  +V 
Sbjct: 12  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 71

Query: 53  FHQLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEI 112
               +         L       FG++D++VNNA             G ++D    +    
Sbjct: 72  ----NYDSVEAGEKLVKTALDTFGRIDVVVNNA-------------GILRDRSFSRI--- 111

Query: 113 VTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
              + E  +   R +  GS ++       ++  +  RI+  +S  G   N  Q
Sbjct: 112 ---SDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQ 161

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 49.1 bits (118), Expect = 1e-07
 Identities = 32/152 (21%), Positives = 51/152 (33%), Gaps = 29/152 (19%)

Query: 2   AVVTG-ANK-GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            ++TG  +   I Y   + +   G  +  T   + +    VEKL    F+       DV 
Sbjct: 29  ILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDR--VEKLCAE-FNPAAVLPCDVI 85

Query: 60  DPATIHSLADFVRSQFGKLDILV------NNAAIFGVSVDGDALSGF------------- 100
               I  L   +   +  LD +V          + G  +D     GF             
Sbjct: 86  SDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAA 145

Query: 101 -VKDGEPIKWNE---IVTPTYELAEKCLRTNY 128
             K+G  +  N    +V  TY  AEK +  +Y
Sbjct: 146 LAKEGRSMMKNRNASMVALTYIGAEKAM-PSY 176

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 8/101 (7%)

Query: 2   AVVTG-ANK-GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDV 58
            VV G ANK  I +   R L   G  ++ T   E R  ++V +L  +   +  I    DV
Sbjct: 10  IVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE-RLEKSVHELAGTLDRNDSIILPCDV 68

Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSG 99
            + A I +    ++ Q G +  + +  A F    + + L G
Sbjct: 69  TNDAEIETCFASIKEQVGVIHGIAHCIA-F---ANKEELVG 105

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 8/100 (8%)

Query: 2   AVVTG-ANK-GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
           A+V G  N+  +G+    +L   G  V L+ + E R     EKL  +     +  + DV 
Sbjct: 11  ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-RLRPEAEKLAEA-LGGALLFRADVT 68

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSG 99
               + +L   V+  FG LD LV+  A F      +A+ G
Sbjct: 69  QDEELDALFAGVKEAFGGLDYLVHAIA-F---APREAMEG 104

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 2   AVVTG-ANK-GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            ++ G AN   I Y   +   + G  +  T  +E    + V  +     +S   ++LDV+
Sbjct: 9   GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQE-LNSPYVYELDVS 66

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSG 99
                 SL + V+   G LD +V++ A F      +AL G
Sbjct: 67  KEEHFKSLYNSVKKDLGSLDFIVHSVA-F---APKEALEG 102

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 47.9 bits (115), Expect = 3e-07
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 8/100 (8%)

Query: 2   AVVTG-ANK-GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            +VTG A+K  I Y   + +   G  +  T +++ +    VE+       S I  Q DVA
Sbjct: 12  ILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQ-LGSDIVLQCDVA 69

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSG 99
           + A+I ++   +   + K D  V++   F     GD L G
Sbjct: 70  EDASIDTMFAELGKVWPKFDGFVHSIG-F---APGDQLDG 105

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 47.6 bits (114), Expect = 4e-07
 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 2   AVVTG-ANK-GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            ++TG  +   I Y   +     G  +  T   + R  + + +     F S +    DVA
Sbjct: 17  ILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAE-FGSELVFPCDVA 74

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDG 104
           D A I +L   +++ +  LD LV++   F      +A++G   DG
Sbjct: 75  DDAQIDALFASLKTHWDSLDGLVHSIG-F---APREAIAGDFLDG 115

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 47.6 bits (114), Expect = 4e-07
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 8/100 (8%)

Query: 2   AVVTG-ANK-GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            V+ G AN   + +   + + + G  V LT   E    + V+ L  S     +    DV+
Sbjct: 33  GVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE-TFKKRVDPLAES-LGVKLTVPCDVS 90

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSG 99
           D  ++ ++   +  ++G LD +V+  A F    D + L G
Sbjct: 91  DAESVDNMFKVLAEEWGSLDFVVHAVA-F---SDKNELKG 126

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 47.6 bits (114), Expect = 4e-07
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 8/100 (8%)

Query: 2   AVVTG-ANK-GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            ++ G AN   I +   +     G  +  T + +    + VE L      + +    DVA
Sbjct: 34  GLILGVANNRSIAWGIAKAAREAGAELAFTYQGD-ALKKRVEPLAEE-LGAFVAGHCDVA 91

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSG 99
           D A+I ++ + +  ++GKLD LV+    F    D D L+G
Sbjct: 92  DAASIDAVFETLEKKWGKLDFLVHAIG-F---SDKDELTG 127

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 47.2 bits (113), Expect = 5e-07
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 8/100 (8%)

Query: 2   AVVTG-ANK-GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
           A++TG AN+  I Y   +     G  +  T     +  + V ++    F S +  + DV+
Sbjct: 24  ALITGVANERSIAYGIAKSFHREGAQLAFTYATP-KLEKRVREIAKG-FGSDLVVKCDVS 81

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSG 99
               I +L  F+   +G LDI+V++ A +      +   G
Sbjct: 82  LDEDIKNLKKFLEENWGSLDIIVHSIA-Y---APKEEFKG 117

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 46.9 bits (112), Expect = 6e-07
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 8/101 (7%)

Query: 2   AVVTG-ANK-GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDV 58
            V+ G ANK  I +   + L   G  +V T R E R  + +EKL           +Q+DV
Sbjct: 35  YVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE-RSRKELEKLLEQLNQPEAHLYQIDV 93

Query: 59  ADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSG 99
                + +  + +    G +D + ++ A F    + + L G
Sbjct: 94  QSDEEVINGFEQIGKDVGNIDGVYHSIA-F---ANMEDLRG 130

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 44.1 bits (105), Expect = 6e-06
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 8/86 (9%)

Query: 2  AVVTG-ANKG-IGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
           +V+G      I +   R     G  +VLT  D  R    ++++           +LDV 
Sbjct: 10 ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR---LIQRITDRLPAKAPLLELDVQ 66

Query: 60 DPATIHSLADFVRSQFG---KLDILV 82
          +   + SLA  V    G   KLD +V
Sbjct: 67 NEEHLASLAGRVTEAIGAGNKLDGVV 92

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 17/113 (15%)

Query: 1   YAVVTGANKG-IGYETVRQLASNGIIVVLTA-RDEKRGLEAVEKL--KHSGFDS----VI 52
           Y ++TGA KG IG E ++ L   G  VV+T  R  K+  +  + +  K+    S    V 
Sbjct: 478 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVP 537

Query: 53  FHQLDVADPATIHSLADFVRSQFGK------LDILVNNAAIFGVSVDGDALSG 99
           F+Q    D   + +L +F+            LD ++  AAI    ++ + +  
Sbjct: 538 FNQGSKQD---VEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDS 587

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 12/87 (13%)

Query: 4  VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
          + GA   IG E  ++L        + A D ++             +S  F  ++  D   
Sbjct: 7  IIGACGQIGTELTQKLRKLYGTENVIASDIRKL-------NTDVVNSGPFEVVNALDFNQ 59

Query: 64 IHSLADFVRSQFGKLDILVNNAAIFGV 90
          I  L      +      +   AA+   
Sbjct: 60 IEHL--VEVHKI---TDIYLMAALLSA 81

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 37.7 bits (88), Expect = 6e-04
 Identities = 14/62 (22%), Positives = 19/62 (30%), Gaps = 7/62 (11%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           + GA    G  T+ Q    G  V +  RD  R    +          V     DV   A
Sbjct: 7  AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR----LPSEGPRPAHVV---VGDVLQAA 59

Query: 63 TI 64
           +
Sbjct: 60 DV 61

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 8/62 (12%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
          V+ GA+  +G   + +  + G  V    R  ++     E LK          + DV+   
Sbjct: 8  VLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLK--------VKKADVSSLD 59

Query: 63 TI 64
           +
Sbjct: 60 EV 61

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	174
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.98
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.98
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.98
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.98
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.98
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.98
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.98
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.98
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.98
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.98
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.98
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.98
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.98
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.98
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.98
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.98
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.97
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.97
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.97
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.97
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.97
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.97
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.97
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.97
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.97
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.97
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.97
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.97
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.97
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.97
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.97
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.97
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.97
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.97
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.97
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.97
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.97
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.97
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.97
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.97
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.97
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.97
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.97
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.97
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.97
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.97
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.97
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.97
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.97
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.97
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.97
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.97
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.97
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.97
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.97
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.97
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.97
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.97
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.97
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.97
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.97
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.97
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.97
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.97
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.97
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.97
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.97
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.97
1spx_A	278	Short-chain reductase family member (5L265); paral	99.97
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.97
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.97
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.97
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.97
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.97
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.97
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.97
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.97
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.97
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.97
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.97
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.97
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.97
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.97
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.97
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.97
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.97
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.97
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.97
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.97
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.97
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.97
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.97
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.97
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.97
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.96
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.96
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.96
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.96
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.96
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.96
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.96
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.96
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.96
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.96
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.96
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.96
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.96
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.96
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.96
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.96
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.96
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.96
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.96
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.96
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.96
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.96
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.96
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.96
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.96
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.96
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.96
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.96
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.96
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.96
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.96
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.96
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.96
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.96
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.96
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.96
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.96
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.96
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.96
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.96
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.96
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.95
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.95
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.95
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.95
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.95
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.95
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.95
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.95
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.95
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.95
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.95
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.95
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.95
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.95
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.95
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.94
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.94
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.94
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.94
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.94
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.94
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.94
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.93
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.93
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.93
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.93
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.93
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.92
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.92
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.92
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.92
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.91
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.91
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.91
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.91
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.9
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.87
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.87
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.85
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.84
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.82
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.81
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.8
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.8
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.8
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.79
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.79
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.79
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.79
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.79
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.79
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.79
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.78
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.78
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.78
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.78
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.78
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.78
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.78
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.77
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.77
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.77
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.77
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.76
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.76
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.76
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.76
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.76
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.75
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.75
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.75
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.75
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.75
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.74
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.74
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.74
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.74
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.74
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.73
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.73
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.73
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.73
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.72
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.72
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.71
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.71
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.71
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.71
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.71
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.7
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.7
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.7
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.7
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.7
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.7
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.68
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.68
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.67
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.67
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.67
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.64
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.64
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.63
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.63
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.62
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.62
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.62
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.61
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.6
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.6
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.59
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.58
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.58
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.57
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.57
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.52
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.5
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.5
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.47
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.45
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.45
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.44
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.44
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.44
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.43
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.41
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.36
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.33
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.11
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	99.05
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.05
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	99.04
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.04
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.99
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.98
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.84
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.77
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.77
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.73
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.67
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.65
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.64
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.5
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.48
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.47
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.46
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.46
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.43
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.43
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.42
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.41
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.4
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.39
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.37
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.37
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.33
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.32
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.31
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.24
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.19
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.19
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.18
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.18
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.16
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.14
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.14
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.12
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.07
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.05
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.04
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.04
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.03
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.0
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.99
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.97
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.92
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.91
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.9
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.89
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.88
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.87
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.83
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.78
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.76
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.76
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.74
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.74
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.72
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.71
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.69
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.65
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.65
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.65
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.64
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.63
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.63
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.62
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.62
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.57
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.53
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.52
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.52
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.52
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.46
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.45
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.33
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.31
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.27
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.25
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.24
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.19
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.19
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.19
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.18
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.17
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.16
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.15
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.13
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.13
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.13
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.12
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.12
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.08
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.07
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.06
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.05
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.04
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.03
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.01
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.01
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.99
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.99
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.99
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.98
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.97
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.96
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.96
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.93
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.9
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.89
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.88
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.87
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.86
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.85
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.82
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.78
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.76
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.75
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.73
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.72
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.7
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.69
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.65
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.64
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.55
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.54
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.54
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.5
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.5
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.49
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.49
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.47
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.42
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.41
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.38
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.34
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.31
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.31
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.29
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.28
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.27
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.25
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.24
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.23
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.18
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.18
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.15
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.13
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.08
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.06
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.06
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.06
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.05
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.03
1lnq_A	336	MTHK channels, potassium channel related protein;	96.02
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	95.96
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.94
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.94
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.89
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.85
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.84
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.8
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.78
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.78
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.77
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.76
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	95.76
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	95.75
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.66
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.66
2l82_A	162	Designed protein OR32; structural genomics, northe	95.6
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.54
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.53
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.5
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.48
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.48
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.42
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.4
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.36
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.36
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	95.32
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.32
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.31

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=3.4e-39  Score=238.81  Aligned_cols=154  Identities=25%  Similarity=0.297  Sum_probs=141.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++++.++ ++.++++|++|+++++++++++.++||+||+
T Consensus         9 valVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   87 (254)
T 4fn4_A            9 VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKKDVEEFVRRTFETYSRIDV   87 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            589999999999999999999999999999999989999999987764 5999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+..+.                  .++.+.+.++|+++|++|+.|+++++|+++|+|++++.|+||++||+.+..
T Consensus        88 LVNNAGi~~~~------------------~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~  149 (254)
T 4fn4_A           88 LCNNAGIMDGV------------------TPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR  149 (254)
T ss_dssp             EEECCCCCCTT------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC
T ss_pred             EEECCcccCCC------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC
Confidence            99999975421                  235677889999999999999999999999999999899999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       150 ~~~~~~~Y~asKa  162 (254)
T 4fn4_A          150 GGFAGAPYTVAKH  162 (254)
T ss_dssp             SSSSCHHHHHHHH
T ss_pred             CCCCChHHHHHHH
Confidence            9999999999985

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=9e-38  Score=231.30  Aligned_cols=153  Identities=22%  Similarity=0.222  Sum_probs=139.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.++ ++..+++|++|+++++++++++.++||+||+
T Consensus        11 valVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   89 (255)
T 4g81_D           11 TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEGIHVDI   89 (255)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            589999999999999999999999999999999888899999988764 5899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccC-CCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQL-SDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~iv~isS~~~~  159 (174)
                      ||||||+...                   .++.+.+.++|+++|++|+.|+++++|+++|+|.+ +++|+||++||..+.
T Consensus        90 LVNNAG~~~~-------------------~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~  150 (255)
T 4g81_D           90 LINNAGIQYR-------------------KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ  150 (255)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc
Confidence            9999998543                   23567788999999999999999999999999965 456999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+++|+
T Consensus       151 ~~~~~~~~Y~asKa  164 (255)
T 4g81_D          151 AARPTVAPYTAAKG  164 (255)
T ss_dssp             SBCTTCHHHHHHHH
T ss_pred             CCCCCchhHHHHHH
Confidence            99999999999985

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=3.4e-36  Score=221.90  Aligned_cols=148  Identities=22%  Similarity=0.273  Sum_probs=131.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+++..++..    +.. .++..+++|++|+++++++++++.+++|+||+
T Consensus         4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~~-~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KER-PNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TTC-TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hhc-CCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999999976554433    333 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+...                   .++.+.+.++|+++|++|+.++++++|+++|+|++++ |+||++||+.+..
T Consensus        79 LVNNAG~~~~-------------------~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~  138 (247)
T 3ged_A           79 LVNNACRGSK-------------------GILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQ  138 (247)
T ss_dssp             EEECCCCCCC-------------------CGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTS
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeeccccc
Confidence            9999998543                   2356678899999999999999999999999998776 9999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       139 ~~~~~~~Y~asKa  151 (247)
T 3ged_A          139 SEPDSEAYASAKG  151 (247)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCHHHHHHHH
Confidence            9999999999985

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=7.5e-36  Score=222.88  Aligned_cols=148  Identities=24%  Similarity=0.263  Sum_probs=133.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   + .+...+++|++|+++++++++++.++||+||+
T Consensus        31 valVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           31 IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G-GGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-TTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C-CCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999999988777777666   2 45888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||....                   .++.+.+.++|++.|++|+.|+++++|+++|+|++  .|+||++||+.+..
T Consensus       107 LVNNAG~~~~-------------------~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~  165 (273)
T 4fgs_A          107 LFVNAGGGSM-------------------LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGST  165 (273)
T ss_dssp             EEECCCCCCC-------------------CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGS
T ss_pred             EEECCCCCCC-------------------CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhcc
Confidence            9999998543                   23566788999999999999999999999999975  38999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       166 ~~~~~~~Y~asKa  178 (273)
T 4fgs_A          166 GTPAFSVYAASKA  178 (273)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCchHHHHHHH
Confidence            9999999999985

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2.9e-35  Score=218.48  Aligned_cols=150  Identities=24%  Similarity=0.260  Sum_probs=132.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.. +..+++.+.++ ++.++++|++|+++++++++++.++||+||+
T Consensus         9 valVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~-~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDi   86 (258)
T 4gkb_A            9 VVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDG-AFLDALAQRQP-RATYLPVELQDDAQCRDAVAQTIATFGRLDG   86 (258)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCH-HHHHHHHHHCT-TCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccH-HHHHHHHhcCC-CEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            589999999999999999999999999999987653 34455655554 5899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+....                    ..+.+.++|++.+++|+.++++++|+++|+|++++ |+||++||+.+..
T Consensus        87 LVNnAGi~~~~--------------------~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~  145 (258)
T 4gkb_A           87 LVNNAGVNDGI--------------------GLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVT  145 (258)
T ss_dssp             EEECCCCCCCC--------------------CTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHH
T ss_pred             EEECCCCCCCC--------------------CccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhcc
Confidence            99999984321                    23567789999999999999999999999997665 9999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       146 ~~~~~~~Y~asKa  158 (258)
T 4gkb_A          146 GQGNTSGYCASKG  158 (258)
T ss_dssp             CCSSCHHHHHHHH
T ss_pred             CCCCchHHHHHHH
Confidence            9999999999985

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.2e-34  Score=212.49  Aligned_cols=153  Identities=23%  Similarity=0.375  Sum_probs=139.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus         6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   84 (264)
T 3tfo_A            6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG-GTALAQVLDVTDRHSVAAFAQAAVDTWGRIDV   84 (264)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999888888888887765 45889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+...                   .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||..+..
T Consensus        85 lVnnAG~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~  145 (264)
T 3tfo_A           85 LVNNAGVMPL-------------------SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS  145 (264)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc
Confidence            9999998532                   234566888999999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       146 ~~~~~~~Y~asKa  158 (264)
T 3tfo_A          146 VVPTAAVYCATKF  158 (264)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             cCCCChhHHHHHH
Confidence            9999999999985

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=1.8e-33  Score=210.05  Aligned_cols=154  Identities=27%  Similarity=0.275  Sum_probs=139.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc-CCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++... ++.++.++.+|++|+++++++++++.+++|++|
T Consensus        10 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   89 (265)
T 3lf2_A           10 VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCAS   89 (265)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCS
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999999999988888888888774 333599999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||+...                   .++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+.
T Consensus        90 ~lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  150 (265)
T 3lf2_A           90 ILVNNAGQGRV-------------------STFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLAS  150 (265)
T ss_dssp             EEEECCCCCCC-------------------BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGT
T ss_pred             EEEECCCCCCC-------------------CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccC
Confidence            99999998532                   23456688899999999999999999999999999888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       151 ~~~~~~~~Y~asKa  164 (265)
T 3lf2_A          151 QPEPHMVATSAARA  164 (265)
T ss_dssp             SCCTTBHHHHHHHH
T ss_pred             CCCCCchhhHHHHH
Confidence            99999999999985

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1e-33  Score=211.00  Aligned_cols=154  Identities=27%  Similarity=0.245  Sum_probs=139.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.+.+..++.++.+|++|+++++++++++.+++|++|+
T Consensus        12 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   91 (262)
T 3pk0_A           12 SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDV   91 (262)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            58999999999999999999999999999999888888888888776557999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc-
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK-  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~-  159 (174)
                      +|||||+...                   .++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+. 
T Consensus        92 lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~  152 (262)
T 3pk0_A           92 VCANAGVFPD-------------------APLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI  152 (262)
T ss_dssp             EEECCCCCCC-------------------CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc
Confidence            9999998542                   12456688899999999999999999999999998888999999999997 


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       153 ~~~~~~~~Y~asK~  166 (262)
T 3pk0_A          153 TGYPGWSHYGATKA  166 (262)
T ss_dssp             BCCTTCHHHHHHHH
T ss_pred             CCCCCChhhHHHHH
Confidence            78889999999985

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.5e-34  Score=212.54  Aligned_cols=146  Identities=24%  Similarity=0.203  Sum_probs=126.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+..  ++..+++.+.++ ++..+++|++|++++++++     .+|+||+
T Consensus        11 valVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~-----~~g~iDi   82 (247)
T 4hp8_A           11 KALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGG-NASALLIDFADPLAAKDSF-----TDAGFDI   82 (247)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTC-CEEEEECCTTSTTTTTTSS-----TTTCCCE
T ss_pred             EEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCC-cEEEEEccCCCHHHHHHHH-----HhCCCCE
Confidence            5899999999999999999999999999999854  355566666654 5999999999999988766     3589999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      ||||||+...                   .++.+++.++|+++|++|+.|+|+++|+++|+|.+++ .|+||++||+.+.
T Consensus        83 LVNNAGi~~~-------------------~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~  143 (247)
T 4hp8_A           83 LVNNAGIIRR-------------------ADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSF  143 (247)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             EEECCCCCCC-------------------CCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhC
Confidence            9999998543                   2356778899999999999999999999999997664 6999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+++|+
T Consensus       144 ~g~~~~~~Y~asKa  157 (247)
T 4hp8_A          144 QGGIRVPSYTAAKH  157 (247)
T ss_dssp             SCCSSCHHHHHHHH
T ss_pred             CCCCCChHHHHHHH
Confidence            99999999999985

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.9e-33  Score=208.43  Aligned_cols=155  Identities=24%  Similarity=0.335  Sum_probs=139.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeec--CChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDV--ADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv--~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...++.++.++.+|+  +|+++++++++++.+++|++
T Consensus        14 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   93 (252)
T 3f1l_A           14 IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRL   93 (252)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCC
Confidence            4899999999999999999999999999999988888888888776655689999999  99999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||+....                  .++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||++||..+
T Consensus        94 d~lv~nAg~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~  155 (252)
T 3f1l_A           94 DGVLHNAGLLGDV------------------CPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVG  155 (252)
T ss_dssp             SEEEECCCCCCCC------------------SCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CEEEECCccCCCC------------------CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhh
Confidence            9999999985321                  1245567889999999999999999999999999888899999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+++|+
T Consensus       156 ~~~~~~~~~Y~asK~  170 (252)
T 3f1l_A          156 RQGRANWGAYAASKF  170 (252)
T ss_dssp             TSCCTTCHHHHHHHH
T ss_pred             ccCCCCCchhHHHHH
Confidence            999999999999985

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.6e-33  Score=209.36  Aligned_cols=152  Identities=25%  Similarity=0.287  Sum_probs=138.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus        14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   92 (256)
T 3gaf_A           14 VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG-GKAIGLECNVTDEQHREAVIKAALDQFGKITV   92 (256)
T ss_dssp             EEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999888888888887665 45999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||...+.                   .+ +.+.+++++.+++|+.++++++++++|+|++++.|+||++||..+..
T Consensus        93 lv~nAg~~~~~-------------------~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  152 (256)
T 3gaf_A           93 LVNNAGGGGPK-------------------PF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN  152 (256)
T ss_dssp             EEECCCCCCCC-------------------CT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC
T ss_pred             EEECCCCCCCC-------------------CC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC
Confidence            99999985431                   12 56788899999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       153 ~~~~~~~Y~asKa  165 (256)
T 3gaf_A          153 TNVRMASYGSSKA  165 (256)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCchHHHHHHH
Confidence            9999999999985

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.5e-33  Score=209.14  Aligned_cols=152  Identities=15%  Similarity=0.174  Sum_probs=138.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..++++..+ .++.++.+|++|+++++++++++.++ |++|+
T Consensus         9 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~id~   86 (252)
T 3h7a_A            9 TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-GRIVARSLDARNEDEVTAFLNAADAH-APLEV   86 (252)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHH-SCEEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECcCCCHHHHHHHHHHHHhh-CCceE
Confidence            48999999999999999999999999999999888888888887765 46999999999999999999999999 99999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+....                   ++.+.+.+++++.+++|+.|+++++++++|.|++++.|+||++||..+..
T Consensus        87 lv~nAg~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  147 (252)
T 3h7a_A           87 TIFNVGANVNF-------------------PILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR  147 (252)
T ss_dssp             EEECCCCCCCC-------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC
T ss_pred             EEECCCcCCCC-------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC
Confidence            99999985431                   24566889999999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       148 ~~~~~~~Y~asKa  160 (252)
T 3h7a_A          148 GGSGFAAFASAKF  160 (252)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCccHHHHHH
Confidence            9999999999985

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=7.8e-34  Score=211.30  Aligned_cols=145  Identities=21%  Similarity=0.207  Sum_probs=126.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.++           ...+..++++|++|+++++++++++.+++|++|+
T Consensus        13 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-----------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A           13 RALITAGTKGAGAATVSLFLELGAQVLTTARARPE-----------GLPEELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             EEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT-----------TSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             EEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh-----------CCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999997542           1123567899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+.....                 .++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||++||+.+..
T Consensus        82 lVnnAG~~~~~~-----------------~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~  144 (261)
T 4h15_A           82 IVHMLGGSSAAG-----------------GGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVL  144 (261)
T ss_dssp             EEECCCCCCCCS-----------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEECCCCCccCC-----------------CCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhcc
Confidence            999999854321                 234567889999999999999999999999999999899999999999999


Q ss_pred             cCC-CCcceeeecc
Q 035504          161 KNT-WQGAICYLTF  173 (174)
Q Consensus       161 ~~~-~~~~y~~~k~  173 (174)
                      +.| +...|+++|+
T Consensus       145 ~~~~~~~~Y~asKa  158 (261)
T 4h15_A          145 PLPESTTAYAAAKA  158 (261)
T ss_dssp             CCTTTCHHHHHHHH
T ss_pred             CCCCccHHHHHHHH
Confidence            876 5788999885

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=3.4e-33  Score=207.81  Aligned_cols=153  Identities=25%  Similarity=0.288  Sum_probs=137.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEE-eeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|+++ +|+.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|
T Consensus         6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (258)
T 3oid_A            6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG-VKVLVVKANVGQPAKIKEMFQQIDETFGRLD   84 (258)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999987 788777777777777655 4599999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||....                   .+..+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+.
T Consensus        85 ~lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~  145 (258)
T 3oid_A           85 VFVNNAASGVL-------------------RPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSI  145 (258)
T ss_dssp             EEEECCCCCCC-------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGT
T ss_pred             EEEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhC
Confidence            99999997432                   23456688899999999999999999999999999888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       146 ~~~~~~~~Y~asKa  159 (258)
T 3oid_A          146 RYLENYTTVGVSKA  159 (258)
T ss_dssp             SBCTTCHHHHHHHH
T ss_pred             CCCCCcHHHHHHHH
Confidence            99999999999985

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.7e-33  Score=210.20  Aligned_cols=154  Identities=27%  Similarity=0.276  Sum_probs=138.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (283)
T 3v8b_A           30 VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG-GQAIALEADVSDELQMRNAVRDLVLKFGHLDI  108 (283)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999999888888888887655 35899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+....                  .++.+.+.++|++.+++|+.|+++++++++|+|++++.|+||++||..+..
T Consensus       109 lVnnAg~~~~~------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~  170 (283)
T 3v8b_A          109 VVANAGINGVW------------------APIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTR  170 (283)
T ss_dssp             EEECCCCCCCB------------------CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT
T ss_pred             EEECCCCCCCC------------------CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhcc
Confidence            99999985321                  234566888999999999999999999999999988889999999999987


Q ss_pred             --cCCCCcceeeecc
Q 035504          161 --KNTWQGAICYLTF  173 (174)
Q Consensus       161 --~~~~~~~y~~~k~  173 (174)
                        +.++...|+++|+
T Consensus       171 ~~~~~~~~~Y~asKa  185 (283)
T 3v8b_A          171 TFTTPGATAYTATKA  185 (283)
T ss_dssp             BCCSTTCHHHHHHHH
T ss_pred             CCCCCCchHHHHHHH
Confidence              7788899999985

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=3e-33  Score=211.62  Aligned_cols=154  Identities=28%  Similarity=0.286  Sum_probs=139.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.+.++.++.++.+|++|+++++++++++.+++|++|+
T Consensus        43 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  122 (293)
T 3rih_A           43 SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDV  122 (293)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999888888888888776557999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc-
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK-  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~-  159 (174)
                      ||||||+....                   .+.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+. 
T Consensus       123 lvnnAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~  183 (293)
T 3rih_A          123 VCANAGIFPEA-------------------RLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV  183 (293)
T ss_dssp             EEECCCCCCCC-------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT
T ss_pred             EEECCCCCCCC-------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc
Confidence            99999985431                   2345688899999999999999999999999998888999999999996 


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       184 ~~~~~~~~Y~asKa  197 (293)
T 3rih_A          184 TGYPGWSHYGASKA  197 (293)
T ss_dssp             BBCTTCHHHHHHHH
T ss_pred             CCCCCCHHHHHHHH
Confidence            78889999999985

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.2e-33  Score=207.19  Aligned_cols=140  Identities=25%  Similarity=0.253  Sum_probs=121.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..+       +....++..+++|++|+++++++++    ++|+||+
T Consensus        13 ~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~-------~~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~iDi   81 (242)
T 4b79_A           13 QVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH-------APRHPRIRREELDITDSQRLQRLFE----ALPRLDV   81 (242)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT-------SCCCTTEEEEECCTTCHHHHHHHHH----HCSCCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh-------hhhcCCeEEEEecCCCHHHHHHHHH----hcCCCCE
Confidence            5899999999999999999999999999999866432       2223468999999999999887764    6899999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+..+                     ..+.+.++|++.|++|+.|+++++|+++|+|++++ |+||++||+.+..
T Consensus        82 LVNNAGi~~~---------------------~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~  139 (242)
T 4b79_A           82 LVNNAGISRD---------------------REEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTF  139 (242)
T ss_dssp             EEECCCCCCG---------------------GGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTS
T ss_pred             EEECCCCCCC---------------------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccC
Confidence            9999998432                     23567889999999999999999999999997654 9999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       140 ~~~~~~~Y~asKa  152 (242)
T 4b79_A          140 GSADRPAYSASKG  152 (242)
T ss_dssp             CCSSCHHHHHHHH
T ss_pred             CCCCCHHHHHHHH
Confidence            9999999999985

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.8e-33  Score=209.94  Aligned_cols=154  Identities=27%  Similarity=0.363  Sum_probs=137.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++| +.+..++..+++....+.++.++.+|++|+++++++++++.+++|++|
T Consensus        27 ~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  106 (281)
T 3v2h_A           27 TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGAD  106 (281)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCC
Confidence            4899999999999999999999999999999 555566677777766556799999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+...                   ..+.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+.
T Consensus       107 ~lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  167 (281)
T 3v2h_A          107 ILVNNAGVQFV-------------------EKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGL  167 (281)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             EEEECCCCCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccc
Confidence            99999998542                   12456688899999999999999999999999998888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       168 ~~~~~~~~Y~asKa  181 (281)
T 3v2h_A          168 VASPFKSAYVAAKH  181 (281)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             cCCCCchHHHHHHH
Confidence            99999999999985

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.6e-33  Score=209.27  Aligned_cols=154  Identities=27%  Similarity=0.273  Sum_probs=138.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.+..+.++.++++|++|+++++++++++.+++|++|+
T Consensus        22 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  101 (266)
T 4egf_A           22 RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDV  101 (266)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999888888888887644456999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      ||||||+..+                   .++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+.
T Consensus       102 lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  162 (266)
T 4egf_A          102 LVNNAGISHP-------------------QPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL  162 (266)
T ss_dssp             EEEECCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             EEECCCcCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhc
Confidence            9999998543                   1345667889999999999999999999999998765 6899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       163 ~~~~~~~~Y~asK~  176 (266)
T 4egf_A          163 APLPDHYAYCTSKA  176 (266)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             cCCCCChHHHHHHH
Confidence            99999999999985

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.2e-32  Score=204.73  Aligned_cols=156  Identities=15%  Similarity=0.098  Sum_probs=137.9

Q ss_pred             CEEEecCCC--chhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANK--GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++  |||+++|++|+++|++|++++|+.+..++..+++.+.++.++.++++|++|+++++++++++.+++|++
T Consensus         8 ~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (256)
T 4fs3_A            8 TYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNI   87 (256)
T ss_dssp             EEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             EEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            589999864  999999999999999999999998888888888887776679999999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||+....+               ......+.+.++|...+++|+.+++++++.+.|+|++  .|+||++||+.+
T Consensus        88 D~lvnnAg~~~~~~---------------~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~  150 (256)
T 4fs3_A           88 DGVYHSIAFANMED---------------LRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGG  150 (256)
T ss_dssp             SEEEECCCCCCGGG---------------GTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGG
T ss_pred             CEEEeccccccccc---------------cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEecccc
Confidence            99999999864321               1233456788889999999999999999999998864  499999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|+...|+++|+
T Consensus       151 ~~~~~~~~~Y~asKa  165 (256)
T 4fs3_A          151 EFAVQNYNVMGVAKA  165 (256)
T ss_dssp             TSCCTTTHHHHHHHH
T ss_pred             ccCcccchhhHHHHH
Confidence            999999999999985

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.1e-33  Score=209.74  Aligned_cols=155  Identities=24%  Similarity=0.245  Sum_probs=138.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.+.++..+.++++|++|+++++++++++.+++|++|+
T Consensus        35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  114 (281)
T 4dry_A           35 IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDL  114 (281)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999888888888887666555689999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC--CCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD--LPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~isS~~~  158 (174)
                      ||||||.....                  ..+.+.+.++|++.+++|+.|+++++++++|.|++++  .|+||++||..+
T Consensus       115 lvnnAG~~~~~------------------~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  176 (281)
T 4dry_A          115 LVNNAGSNVPP------------------VPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISA  176 (281)
T ss_dssp             EEECCCCCCCC------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGG
T ss_pred             EEECCCCCCCC------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHh
Confidence            99999985321                  1345668899999999999999999999999998875  689999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+++|+
T Consensus       177 ~~~~~~~~~Y~asKa  191 (281)
T 4dry_A          177 QTPRPNSAPYTATKH  191 (281)
T ss_dssp             TCCCTTCHHHHHHHH
T ss_pred             CCCCCCChhHHHHHH
Confidence            999999999999985

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=2.4e-33  Score=210.00  Aligned_cols=153  Identities=21%  Similarity=0.207  Sum_probs=139.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.+.+. ++.++.+|++|+++++++++++.+++|++|+
T Consensus        28 ~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (271)
T 4ibo_A           28 TALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARLDEQGIDVDI  106 (271)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHHTCCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            489999999999999999999999999999998888888888877654 5899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+...                   .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus       107 lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~  167 (271)
T 4ibo_A          107 LVNNAGIQFR-------------------KPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL  167 (271)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCC-------------------CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC
Confidence            9999998543                   134566888999999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       168 ~~~~~~~Y~asKa  180 (271)
T 4ibo_A          168 ARATVAPYTVAKG  180 (271)
T ss_dssp             BCTTCHHHHHHHH
T ss_pred             CCCCchhHHHHHH
Confidence            9999999999985

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=6.7e-33  Score=206.04  Aligned_cols=153  Identities=18%  Similarity=0.201  Sum_probs=136.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus         8 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   86 (257)
T 3imf_A            8 VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP-GQILTVQMDVRNTDDIQKMIEQIDEKFGRIDI   86 (257)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST-TCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999888888888776654 45999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhc-cCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLL-QLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m-~~~~~g~iv~isS~~~~  159 (174)
                      ||||||....                   .+..+.+.++|++.+++|+.++++++++++|+| ++++.|+||++||..+.
T Consensus        87 lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  147 (257)
T 3imf_A           87 LINNAAGNFI-------------------CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAW  147 (257)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGG
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhc
Confidence            9999997432                   234566888999999999999999999999999 55557999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       148 ~~~~~~~~Y~asKa  161 (257)
T 3imf_A          148 DAGPGVIHSAAAKA  161 (257)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             cCCCCcHHHHHHHH
Confidence            99999999999985

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=7.6e-33  Score=208.10  Aligned_cols=153  Identities=24%  Similarity=0.314  Sum_probs=134.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC------------hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD------------EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLA   68 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~   68 (174)
                      ++|||||++|||+++|++|+++|++|++++|+            .+...+..+++...+ .++.++++|++|++++++++
T Consensus        12 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~   90 (281)
T 3s55_A           12 TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG-RRCISAKVDVKDRAALESFV   90 (281)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHH
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC-CeEEEEeCCCCCHHHHHHHH
Confidence            48999999999999999999999999999996            444555555565554 46999999999999999999


Q ss_pred             HHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCC
Q 035504           69 DFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP  148 (174)
Q Consensus        69 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g  148 (174)
                      +++.+++|++|+||||||+....                   .+.+.+.++|++.|++|+.++++++++++|.|++++.|
T Consensus        91 ~~~~~~~g~id~lv~nAg~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g  151 (281)
T 3s55_A           91 AEAEDTLGGIDIAITNAGISTIA-------------------LLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYG  151 (281)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCC-------------------CTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCC-------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999999985431                   23566788999999999999999999999999888889


Q ss_pred             eEEEEecCCCcccCCCCcceeeecc
Q 035504          149 RIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       149 ~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      +||++||..+..+.++...|+++|+
T Consensus       152 ~iv~isS~~~~~~~~~~~~Y~asK~  176 (281)
T 3s55_A          152 RIVTVSSMLGHSANFAQASYVSSKW  176 (281)
T ss_dssp             EEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred             EEEEECChhhcCCCCCCchhHHHHH
Confidence            9999999999999999999999985

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.8e-33  Score=209.55  Aligned_cols=153  Identities=27%  Similarity=0.299  Sum_probs=138.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+. ++.++.+|++|+++++++++++.+++|++|+
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (270)
T 3ftp_A           30 VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL-EGRGAVLNVNDATAVDALVESTLKEFGALNV  108 (270)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            489999999999999999999999999999998888888888876653 4889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+....                   .+.+.+.++|++.+++|+.|+++++++++|.|.+++.|+||++||..+..
T Consensus       109 lvnnAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  169 (270)
T 3ftp_A          109 LVNNAGITQDQ-------------------LAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA  169 (270)
T ss_dssp             EEECCCCCCCB-------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             EEECCCCCCCC-------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC
Confidence            99999985432                   23456788999999999999999999999999888889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       170 ~~~~~~~Y~asKa  182 (270)
T 3ftp_A          170 GNPGQVNYAAAKA  182 (270)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCchhHHHHHH
Confidence            9999999999985

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=8.5e-33  Score=207.81  Aligned_cols=153  Identities=31%  Similarity=0.351  Sum_probs=138.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus        26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  104 (279)
T 3sju_A           26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG-HDVDGSSCDVTSTDEVHAAVAAAVERFGPIGI  104 (279)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            48999999999999999999999999999999888888888887665 45999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhh--hccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIP--LLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~m~~~~~g~iv~isS~~~  158 (174)
                      ||||||.....                   +..+.+.++|++.+++|+.|+++++++++|  .|++++.|+||++||..+
T Consensus       105 lv~nAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~  165 (279)
T 3sju_A          105 LVNSAGRNGGG-------------------ETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGG  165 (279)
T ss_dssp             EEECCCCCCCS-------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGG
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhh
Confidence            99999985431                   234567889999999999999999999999  688777899999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+++|+
T Consensus       166 ~~~~~~~~~Y~asKa  180 (279)
T 3sju_A          166 KQGVMYAAPYTASKH  180 (279)
T ss_dssp             TSCCTTCHHHHHHHH
T ss_pred             ccCCCCChhHHHHHH
Confidence            999999999999985

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-32  Score=205.27  Aligned_cols=153  Identities=23%  Similarity=0.343  Sum_probs=138.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus        13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   91 (264)
T 3ucx_A           13 VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG-RRALSVGTDITDDAQVAHLVDETMKAYGRVDV   91 (264)
T ss_dssp             EEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            48999999999999999999999999999999888888888887765 45999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                  .++.+.+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..
T Consensus        92 lv~nAg~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~  152 (264)
T 3ucx_A           92 VINNAFRVPSM------------------KPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRH  152 (264)
T ss_dssp             EEECCCSCCCC------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGC
T ss_pred             EEECCCCCCCC------------------CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhcc
Confidence            99999874321                  2345668899999999999999999999999998776 9999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       153 ~~~~~~~Y~asKa  165 (264)
T 3ucx_A          153 SQAKYGAYKMAKS  165 (264)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCccHHHHHHHH
Confidence            9999999999985

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=2.7e-33  Score=210.29  Aligned_cols=154  Identities=22%  Similarity=0.268  Sum_probs=138.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+...+..+++....+.++.++.+|++|+++++++++++.+++|++|+
T Consensus        29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  108 (277)
T 4fc7_A           29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDI  108 (277)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999888888888876654557999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||....                   .+..+.+.++|++++++|+.++++++++++|.|.+++.|+||++||..+..
T Consensus       109 lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  169 (277)
T 4fc7_A          109 LINCAAGNFL-------------------CPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR  169 (277)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH
T ss_pred             EEECCcCCCC-------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC
Confidence            9999997432                   124556888999999999999999999999999887789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       170 ~~~~~~~Y~asKa  182 (277)
T 4fc7_A          170 GQALQVHAGSAKA  182 (277)
T ss_dssp             TCTTCHHHHHHHH
T ss_pred             CCCCcHHHHHHHH
Confidence            9999999999985

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1e-32  Score=207.30  Aligned_cols=153  Identities=25%  Similarity=0.290  Sum_probs=135.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-------------ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-------------DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSL   67 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~   67 (174)
                      ++|||||++|||+++|++|+++|++|++++|             +.+..++..+++...+ .++.++.+|++|+++++++
T Consensus        17 ~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~   95 (280)
T 3pgx_A           17 VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-RKALTRVLDVRDDAALREL   95 (280)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHH
Confidence            4899999999999999999999999999998             5555666666666554 4589999999999999999


Q ss_pred             HHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-
Q 035504           68 ADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-  146 (174)
Q Consensus        68 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-  146 (174)
                      ++++.+++|++|+||||||+...                   .++.+.+.++|++.|++|+.++++++++++|+|++++ 
T Consensus        96 ~~~~~~~~g~id~lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~  156 (280)
T 3pgx_A           96 VADGMEQFGRLDVVVANAGVLSW-------------------GRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGN  156 (280)
T ss_dssp             HHHHHHHHCCCCEEEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC-------------------CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999998543                   2345668899999999999999999999999998765 


Q ss_pred             CCeEEEEecCCCcccCCCCcceeeecc
Q 035504          147 LPRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       147 ~g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      .|+||++||..+..+.++...|+++|+
T Consensus       157 ~g~iv~isS~~~~~~~~~~~~Y~asKa  183 (280)
T 3pgx_A          157 GGSIVVVSSSAGLKATPGNGHYSASKH  183 (280)
T ss_dssp             CEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCEEEEEcchhhccCCCCchhHHHHHH
Confidence            699999999999999999999999985

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.4e-32  Score=203.24  Aligned_cols=152  Identities=30%  Similarity=0.360  Sum_probs=135.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus         9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   87 (247)
T 2jah_A            9 VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-AKVHVLELDVADRQGVDAAVASTVEALGGLDI   87 (247)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999887777777776654 45899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+...                   .++.+.+.+++++.+++|+.|+++++++++|.|++++ |+||++||..+..
T Consensus        88 lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~  147 (247)
T 2jah_A           88 LVNNAGIMLL-------------------GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRV  147 (247)
T ss_dssp             EEECCCCCCC-------------------CCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTC
T ss_pred             EEECCCCCCC-------------------CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcC
Confidence            9999998532                   1234567888999999999999999999999998777 9999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       148 ~~~~~~~Y~asK~  160 (247)
T 2jah_A          148 NVRNAAVYQATKF  160 (247)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCcHHHHHHH
Confidence            9999999999985

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=6e-33  Score=205.61  Aligned_cols=153  Identities=25%  Similarity=0.330  Sum_probs=130.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC--CCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG--FDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.+..  ..++.++.+|++|+++++++++++.+++|++
T Consensus         9 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (250)
T 3nyw_A            9 LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAV   88 (250)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            48999999999999999999999999999999888888888887652  2468999999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||+....                   .. +.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+
T Consensus        89 D~lvnnAg~~~~~-------------------~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  148 (250)
T 3nyw_A           89 DILVNAAAMFMDG-------------------SL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAA  148 (250)
T ss_dssp             EEEEECCCCCCCC-------------------CC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC---
T ss_pred             CEEEECCCcCCCC-------------------CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHh
Confidence            9999999985421                   12 457788999999999999999999999999888899999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.+....|+++|+
T Consensus       149 ~~~~~~~~~Y~asKa  163 (250)
T 3nyw_A          149 KYGFADGGIYGSTKF  163 (250)
T ss_dssp             ----CCTTHHHHHHH
T ss_pred             cCCCCCCcchHHHHH
Confidence            997777899999985

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.9e-32  Score=205.77  Aligned_cols=150  Identities=23%  Similarity=0.287  Sum_probs=134.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++    +.++.++++|++|+++++++++++.+++|++|+
T Consensus        29 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           29 VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI----GSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999987766666554    245889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+....                   +..+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..
T Consensus       105 lv~nAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  165 (277)
T 4dqx_A          105 LVNNAGFGTTG-------------------NVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS  165 (277)
T ss_dssp             EEECCCCCCCB-------------------CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS
T ss_pred             EEECCCcCCCC-------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc
Confidence            99999985431                   23456788999999999999999999999999998889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       166 ~~~~~~~Y~asKa  178 (277)
T 4dqx_A          166 AIADRTAYVASKG  178 (277)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCChhHHHHHH
Confidence            9999999999985

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=4.2e-33  Score=206.19  Aligned_cols=150  Identities=29%  Similarity=0.327  Sum_probs=134.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++..    +..++++|++|+++++++++++.+++|++|+
T Consensus        11 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A           11 VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD----NGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            489999999999999999999999999999998877777666643    4678999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+...                   .++.+.+.++|++.+++|+.|+++++++++|+|++++.|+||++||..+..
T Consensus        87 lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~  147 (248)
T 3op4_A           87 LVNNAGITRD-------------------NLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM  147 (248)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC
Confidence            9999998543                   124566888999999999999999999999999888889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       148 ~~~~~~~Y~asK~  160 (248)
T 3op4_A          148 GNAGQANYAAAKA  160 (248)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCChHHHHHHH
Confidence            9999999999985

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1e-32  Score=202.69  Aligned_cols=149  Identities=17%  Similarity=0.157  Sum_probs=131.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++..    ++.++.+|++|+++++++++++.+++|++|+
T Consensus         5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN----AVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----GEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC----CceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            489999999999999999999999999999998877777766632    4899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   .++.+.+.+++++.+++|+.|+++++++++|.|++++ |+||++||..+..
T Consensus        81 lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~  140 (235)
T 3l6e_A           81 VLHCAGTGEF-------------------GPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQV  140 (235)
T ss_dssp             EEEECCCC-------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCS
T ss_pred             EEECCCCCCC-------------------CChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcC
Confidence            9999998432                   2244568889999999999999999999999998876 6999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       141 ~~~~~~~Y~asKa  153 (235)
T 3l6e_A          141 GKANESLYCASKW  153 (235)
T ss_dssp             SCSSHHHHHHHHH
T ss_pred             CCCCCcHHHHHHH
Confidence            9999999999985

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.2e-33  Score=208.02  Aligned_cols=154  Identities=26%  Similarity=0.264  Sum_probs=137.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus        10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   88 (280)
T 3tox_A           10 IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG-GEAAALAGDVGDEALHEALVELAVRRFGGLDT   88 (280)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT-CCEEECCCCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999888888888886644 45899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc-
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK-  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~-  159 (174)
                      ||||||+....                  .++.+.+.+++++.+++|+.|+++++++++|.|++++.|+||++||..+. 
T Consensus        89 lvnnAg~~~~~------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  150 (280)
T 3tox_A           89 AFNNAGALGAM------------------GEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT  150 (280)
T ss_dssp             EEECCCCCCSC------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTT
T ss_pred             EEECCCCCCCC------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCc
Confidence            99999985321                  23456688999999999999999999999999999888999999999998 


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       151 ~~~~~~~~Y~asKa  164 (280)
T 3tox_A          151 AGFAGVAPYAASKA  164 (280)
T ss_dssp             BCCTTCHHHHHHHH
T ss_pred             CCCCCchhHHHHHH
Confidence            67888999999985

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.4e-32  Score=206.52  Aligned_cols=150  Identities=27%  Similarity=0.306  Sum_probs=135.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.+++|++|+
T Consensus        31 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           31 VAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             EEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999987777766665    245889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+....                   ++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus       107 lvnnAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~  167 (277)
T 3gvc_A          107 LVANAGVVHLA-------------------SLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV  167 (277)
T ss_dssp             EEECCCCCCCB-------------------CTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc
Confidence            99999985432                   23456888999999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       168 ~~~~~~~Y~asKa  180 (277)
T 3gvc_A          168 AVGGTGAYGMSKA  180 (277)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCchhHHHHHH
Confidence            9999999999985

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.8e-32  Score=206.62  Aligned_cols=153  Identities=20%  Similarity=0.290  Sum_probs=135.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh-------HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK-------RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+       ..++..+++...+ .++.++++|++|+++++++++++.+
T Consensus        11 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   89 (285)
T 3sc4_A           11 TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG-GQALPIVGDIRDGDAVAAAVAKTVE   89 (285)
T ss_dssp             EEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT-SEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999865       3556666666655 3599999999999999999999999


Q ss_pred             hcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEE
Q 035504           74 QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNV  153 (174)
Q Consensus        74 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~i  153 (174)
                      ++|++|++|||||+...                   ..+.+.+.++|++++++|+.++++++|+++|.|++++.|+||++
T Consensus        90 ~~g~id~lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~i  150 (285)
T 3sc4_A           90 QFGGIDICVNNASAINL-------------------GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTL  150 (285)
T ss_dssp             HHSCCSEEEECCCCCCC-------------------CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEEC
T ss_pred             HcCCCCEEEECCCCCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence            99999999999998542                   13455678899999999999999999999999999888999999


Q ss_pred             ecCCCcccC-CCCcceeeecc
Q 035504          154 SSNMGKLKN-TWQGAICYLTF  173 (174)
Q Consensus       154 sS~~~~~~~-~~~~~y~~~k~  173 (174)
                      ||..+..+. ++...|+++|+
T Consensus       151 sS~~~~~~~~~~~~~Y~asKa  171 (285)
T 3sc4_A          151 SPPIRLEPKWLRPTPYMMAKY  171 (285)
T ss_dssp             CCCCCCSGGGSCSHHHHHHHH
T ss_pred             CChhhccCCCCCCchHHHHHH
Confidence            999999876 78899999985

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.1e-32  Score=207.33  Aligned_cols=155  Identities=20%  Similarity=0.214  Sum_probs=139.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCC--ceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD--SVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.+.+..  ++.++.+|++|+++++++++++.+++|++
T Consensus        13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   92 (281)
T 3svt_A           13 TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRL   92 (281)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4899999999999999999999999999999988888888888766542  58899999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||.....                  .++.+.+.++|++.+++|+.|+++++++++|.|.+++.|+||++||..+
T Consensus        93 d~lv~nAg~~~~~------------------~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  154 (281)
T 3svt_A           93 HGVVHCAGGSENI------------------GPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAA  154 (281)
T ss_dssp             CEEEECCCCCCCC------------------CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred             CEEEECCCcCCCC------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHH
Confidence            9999999974321                  2345668889999999999999999999999999888899999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+++|+
T Consensus       155 ~~~~~~~~~Y~asK~  169 (281)
T 3svt_A          155 SNTHRWFGAYGVTKS  169 (281)
T ss_dssp             HSCCTTCTHHHHHHH
T ss_pred             cCCCCCChhHHHHHH
Confidence            999999999999985

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-32  Score=205.94  Aligned_cols=153  Identities=19%  Similarity=0.176  Sum_probs=134.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-------------ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-------------DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSL   67 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~   67 (174)
                      ++|||||++|||+++|++|+++|++|++++|             +.+..++..+++...+ .++.++.+|++|+++++++
T Consensus        13 ~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~   91 (277)
T 3tsc_A           13 VAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN-RRIVAAVVDTRDFDRLRKV   91 (277)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHH
Confidence            4899999999999999999999999999998             4555666666666554 4599999999999999999


Q ss_pred             HHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-
Q 035504           68 ADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-  146 (174)
Q Consensus        68 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-  146 (174)
                      ++++.+++|++|+||||||+..+.                   .+.+.+.++|++.|++|+.++++++++++|.|++++ 
T Consensus        92 ~~~~~~~~g~id~lvnnAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~  152 (277)
T 3tsc_A           92 VDDGVAALGRLDIIVANAGVAAPQ-------------------AWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGR  152 (277)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCC-------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCC-------------------ChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999999985431                   245668899999999999999999999999998765 


Q ss_pred             CCeEEEEecCCCcccCCCCcceeeecc
Q 035504          147 LPRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       147 ~g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      .|+||++||..+..+.++...|+++|+
T Consensus       153 ~g~iv~isS~~~~~~~~~~~~Y~asKa  179 (277)
T 3tsc_A          153 GGSIILISSAAGMKMQPFMIHYTASKH  179 (277)
T ss_dssp             CEEEEEECCGGGTSCCSSCHHHHHHHH
T ss_pred             CCEEEEEccHhhCCCCCCchhhHHHHH
Confidence            689999999999999999999999985

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.4e-33  Score=209.30  Aligned_cols=155  Identities=24%  Similarity=0.286  Sum_probs=139.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC---eEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI---IVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||++|||+++|++|+++|+   +|++++|+.+..++..+++.... +.++.++.+|++|+++++++++++.+++|
T Consensus        35 ~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  114 (287)
T 3rku_A           35 TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFK  114 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGC
T ss_pred             EEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            589999999999999999999998   99999999888888888887653 34689999999999999999999999999


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|+||||||+....                  ..+.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||.
T Consensus       115 ~iD~lVnnAG~~~~~------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~  176 (287)
T 3rku_A          115 DIDILVNNAGKALGS------------------DRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSI  176 (287)
T ss_dssp             SCCEEEECCCCCCCC------------------CCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCCEEEECCCcCCCC------------------CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCh
Confidence            999999999985421                  12456688899999999999999999999999998888999999999


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      .+..+.++...|+++|+
T Consensus       177 ~~~~~~~~~~~Y~asKa  193 (287)
T 3rku_A          177 AGRDAYPTGSIYCASKF  193 (287)
T ss_dssp             GGTSCCTTCHHHHHHHH
T ss_pred             hhcCCCCCCchHHHHHH
Confidence            99999999999999985

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.9e-32  Score=205.19  Aligned_cols=151  Identities=23%  Similarity=0.296  Sum_probs=134.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.    .++.++.+|++|+++++++++++.+++|++|+
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG----DDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT----SCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----CCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999887777766663    45899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC--CCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD--LPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~isS~~~  158 (174)
                      ||||||+..+.                  .++.+.+.++|++.|++|+.|+++++++++|.|++++  .|+||++||..+
T Consensus       106 lVnnAg~~~~~------------------~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  167 (272)
T 4dyv_A          106 LFNNAGTGAPA------------------IPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA  167 (272)
T ss_dssp             EEECCCCCCCS------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSST
T ss_pred             EEECCCCCCCC------------------CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhh
Confidence            99999985431                  1345668899999999999999999999999998775  689999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+++|+
T Consensus       168 ~~~~~~~~~Y~asKa  182 (272)
T 4dyv_A          168 TSPRPYSAPYTATKH  182 (272)
T ss_dssp             TSCCTTCHHHHHHHH
T ss_pred             cCCCCCchHHHHHHH
Confidence            999999999999985

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=8.6e-33  Score=206.81  Aligned_cols=153  Identities=25%  Similarity=0.299  Sum_probs=135.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++| +.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|
T Consensus        30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id  108 (269)
T 4dmm_A           30 IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG-GEAFAVKADVSQESEVEALFAAVIERWGRLD  108 (269)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999999998 4455566666676654 4589999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+...                   ..+.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+.
T Consensus       109 ~lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  169 (269)
T 4dmm_A          109 VLVNNAGITRD-------------------TLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGE  169 (269)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHH
T ss_pred             EEEECCCCCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhc
Confidence            99999998542                   12456688899999999999999999999999998888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       170 ~~~~~~~~Y~asK~  183 (269)
T 4dmm_A          170 MGNPGQANYSAAKA  183 (269)
T ss_dssp             HCCTTCHHHHHHHH
T ss_pred             CCCCCchhHHHHHH
Confidence            99999999999985

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-32  Score=205.36  Aligned_cols=152  Identities=30%  Similarity=0.358  Sum_probs=135.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.+++|++|+
T Consensus        13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           13 VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH----CTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999987777766666    245889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||...+..                 ..+.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..
T Consensus        89 lv~nAg~~~~~~-----------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  151 (271)
T 3tzq_B           89 VDNNAAHSDPAD-----------------MLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA  151 (271)
T ss_dssp             EEECCCCCCTTC-----------------CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCCCC-----------------CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC
Confidence            999999853211                 124566889999999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       152 ~~~~~~~Y~asKa  164 (271)
T 3tzq_B          152 AYDMSTAYACTKA  164 (271)
T ss_dssp             BCSSCHHHHHHHH
T ss_pred             CCCCChHHHHHHH
Confidence            9999999999985

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-32  Score=203.18  Aligned_cols=154  Identities=27%  Similarity=0.361  Sum_probs=135.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++....+.++.++.+|++|+++++++++++.+++|++|+
T Consensus        23 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  102 (267)
T 1vl8_A           23 VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT  102 (267)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999877777777773322345889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC-Cc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM-GK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~-~~  159 (174)
                      ||||||+...                   .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.. +.
T Consensus       103 lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  163 (267)
T 1vl8_A          103 VVNAAGINRR-------------------HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE  163 (267)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC
T ss_pred             EEECCCcCCC-------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhc
Confidence            9999998532                   123456788899999999999999999999999988889999999999 88


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       164 ~~~~~~~~Y~asK~  177 (267)
T 1vl8_A          164 VTMPNISAYAASKG  177 (267)
T ss_dssp             CCSSSCHHHHHHHH
T ss_pred             cCCCCChhHHHHHH
Confidence            88888899999985

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=7.5e-33  Score=204.53  Aligned_cols=153  Identities=29%  Similarity=0.335  Sum_probs=135.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++++ .+..++..+++...+ .++.++++|++|+++++++++++.+++|++|
T Consensus         6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   84 (246)
T 3osu_A            6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG-VDSFAIQANVADADEVKAMIKEVVSQFGSLD   84 (246)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-SCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999998875 455666667776655 4589999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||+....                   ...+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+.
T Consensus        85 ~lv~nAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  145 (246)
T 3osu_A           85 VLVNNAGITRDN-------------------LLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGA  145 (246)
T ss_dssp             EEEECCCCCCCC-------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             EEEECCCCCCCC-------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhc
Confidence            999999985431                   2345678889999999999999999999999988888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+.+|+
T Consensus       146 ~~~~~~~~Y~~sK~  159 (246)
T 3osu_A          146 VGNPGQANYVATKA  159 (246)
T ss_dssp             HCCTTCHHHHHHHH
T ss_pred             CCCCCChHHHHHHH
Confidence            99999999999985

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=2.2e-32  Score=206.05  Aligned_cols=154  Identities=22%  Similarity=0.219  Sum_probs=134.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC----------------hhHHHHHHHHHhhcCCCceeEEEeecCChhhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD----------------EKRGLEAVEKLKHSGFDSVIFHQLDVADPATI   64 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i   64 (174)
                      ++|||||++|||+++|++|+++|++|++++|+                .+..++..+++...+ .++.++.+|++|++++
T Consensus        13 ~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v   91 (286)
T 3uve_A           13 VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-RRIVTAEVDVRDYDAL   91 (286)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHH
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-CceEEEEcCCCCHHHH
Confidence            58999999999999999999999999999886                455556666665544 4699999999999999


Q ss_pred             HHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccC
Q 035504           65 HSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQL  144 (174)
Q Consensus        65 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~  144 (174)
                      +++++++.+++|++|+||||||+....                  ..+.+.+.++|+++|++|+.++++++++++|+|++
T Consensus        92 ~~~~~~~~~~~g~id~lv~nAg~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~  153 (286)
T 3uve_A           92 KAAVDSGVEQLGRLDIIVANAGIGNGG------------------DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIA  153 (286)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCC------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCEEEECCcccCCC------------------CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence            999999999999999999999985432                  12456688899999999999999999999999987


Q ss_pred             CC-CCeEEEEecCCCcccCCCCcceeeecc
Q 035504          145 SD-LPRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       145 ~~-~g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      ++ .|+||++||..+..+.++...|+++|+
T Consensus       154 ~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  183 (286)
T 3uve_A          154 GGRGGSIILTSSVGGLKAYPHTGHYVAAKH  183 (286)
T ss_dssp             HTSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCcEEEEECchhhccCCCCccHHHHHHH
Confidence            65 689999999999999999999999985

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=6.9e-33  Score=204.90  Aligned_cols=150  Identities=22%  Similarity=0.243  Sum_probs=134.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.+++|++|+
T Consensus         8 ~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            8 TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----GKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            5899999999999999999999999999999987777766665    346899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      ||||||+...                   .++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+.
T Consensus        84 lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  144 (247)
T 3rwb_A           84 LVNNASIVPF-------------------VAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFF  144 (247)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHH
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhc
Confidence            9999998532                   1245668889999999999999999999999998876 6999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       145 ~~~~~~~~Y~asKa  158 (247)
T 3rwb_A          145 AGTPNMAAYVAAKG  158 (247)
T ss_dssp             HTCTTCHHHHHHHH
T ss_pred             cCCCCchhhHHHHH
Confidence            99999999999984

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=4e-32  Score=202.35  Aligned_cols=154  Identities=28%  Similarity=0.294  Sum_probs=138.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+.+|++|+
T Consensus        31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  109 (262)
T 3rkr_A           31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG-GEAESHACDLSHSDAIAAFATGVLAAHGRCDV  109 (262)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CceeEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            48999999999999999999999999999999888888888887665 45899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                  ....+.+.+++++.+++|+.|+++++++++|.|++++.|+||++||..+..
T Consensus       110 lv~~Ag~~~~~------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  171 (262)
T 3rkr_A          110 LVNNAGVGWFG------------------GPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN  171 (262)
T ss_dssp             EEECCCCCCCS------------------SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC
T ss_pred             EEECCCccCCC------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC
Confidence            99999984321                  124456788899999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       172 ~~~~~~~Y~asKa  184 (262)
T 3rkr_A          172 PVADGAAYTASKW  184 (262)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCchHHHHHH
Confidence            9999999999985

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=3.3e-32  Score=206.42  Aligned_cols=154  Identities=24%  Similarity=0.225  Sum_probs=135.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC------------hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD------------EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLA   68 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~   68 (174)
                      ++|||||++|||+++|++|+++|++|++++|+            .+...+..+++...+ .++.++++|++|++++++++
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~  108 (299)
T 3t7c_A           30 VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-RRIIASQVDVRDFDAMQAAV  108 (299)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHH
Confidence            58999999999999999999999999999987            555666667776655 45999999999999999999


Q ss_pred             HHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-C
Q 035504           69 DFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-L  147 (174)
Q Consensus        69 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~  147 (174)
                      +++.+++|++|+||||||+.....                  .+.+.+.++|++.|++|+.|+++++++++|.|.+++ .
T Consensus       109 ~~~~~~~g~iD~lv~nAg~~~~~~------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~  170 (299)
T 3t7c_A          109 DDGVTQLGRLDIVLANAALASEGT------------------RLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRG  170 (299)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCC------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCC------------------chhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence            999999999999999999854321                  234568899999999999999999999999987664 6


Q ss_pred             CeEEEEecCCCcccCCCCcceeeecc
Q 035504          148 PRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       148 g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      |+||++||..+..+.++...|+++|+
T Consensus       171 g~Iv~isS~~~~~~~~~~~~Y~asKa  196 (299)
T 3t7c_A          171 GSIVFTSSIGGLRGAENIGNYIASKH  196 (299)
T ss_dssp             EEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             cEEEEECChhhccCCCCcchHHHHHH
Confidence            89999999999999999999999985

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.6e-32  Score=207.23  Aligned_cols=153  Identities=25%  Similarity=0.256  Sum_probs=138.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|.++++++++++.+++|++|+
T Consensus        33 ~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~  111 (301)
T 3tjr_A           33 AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG-FDAHGVVCDVRHLDEMVRLADEAFRLLGGVDV  111 (301)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence            48999999999999999999999999999999888888888887765 35999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      ||||||+...                   .++.+.+.+++++++++|+.|+++++++++|.|++++ .|+||++||..+.
T Consensus       112 lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  172 (301)
T 3tjr_A          112 VFSNAGIVVA-------------------GPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGL  172 (301)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             EEECCCcCCC-------------------CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc
Confidence            9999998543                   1244567889999999999999999999999998766 6899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       173 ~~~~~~~~Y~asKa  186 (301)
T 3tjr_A          173 VPNAGLGTYGVAKY  186 (301)
T ss_dssp             SCCTTBHHHHHHHH
T ss_pred             CCCCCchHHHHHHH
Confidence            99999999999986

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=5.1e-32  Score=199.87  Aligned_cols=155  Identities=30%  Similarity=0.382  Sum_probs=139.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeec--CChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDV--ADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv--~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+..+..++.+|+  +|+++++++++++.+.+|++
T Consensus        16 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~i   95 (247)
T 3i1j_A           16 VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRL   95 (247)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCC
Confidence            4899999999999999999999999999999988888888888877655677888877  99999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||...+.                  .++.+.+.+++++.+++|+.++++++++++|+|++++.|+||++||..+
T Consensus        96 d~lv~nAg~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~  157 (247)
T 3i1j_A           96 DGLLHNASIIGPR------------------TPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVG  157 (247)
T ss_dssp             SEEEECCCCCCCC------------------SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGG
T ss_pred             CEEEECCccCCCC------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhh
Confidence            9999999985321                  2345668899999999999999999999999999888899999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       158 ~~~~~~~~~Y~~sK~  172 (247)
T 3i1j_A          158 RKGRANWGAYGVSKF  172 (247)
T ss_dssp             TSCCTTCHHHHHHHH
T ss_pred             cCCCCCcchhHHHHH
Confidence            999999999999985

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.98  E-value=4.3e-32  Score=202.61  Aligned_cols=155  Identities=21%  Similarity=0.211  Sum_probs=136.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++.+.. +.++.++.+|++|+++++++++++.+++|++|
T Consensus        15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   94 (267)
T 1iy8_A           15 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRID   94 (267)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999999999877777777776542 34688999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+....                  .++.+.+.+++++++++|+.++++++++++|.|++++.|+||++||..+.
T Consensus        95 ~lv~nAg~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  156 (267)
T 1iy8_A           95 GFFNNAGIEGKQ------------------NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGI  156 (267)
T ss_dssp             EEEECCCCCCCC------------------BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             EEEECCCcCCCC------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhc
Confidence            999999985320                  12345678899999999999999999999999988778999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       157 ~~~~~~~~Y~asK~  170 (267)
T 1iy8_A          157 RGIGNQSGYAAAKH  170 (267)
T ss_dssp             SBCSSBHHHHHHHH
T ss_pred             cCCCCCccHHHHHH
Confidence            99899999999985

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.98  E-value=2e-32  Score=205.21  Aligned_cols=153  Identities=19%  Similarity=0.232  Sum_probs=133.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-------HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-------GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.       .++..+++...+ .++.++.+|++|+++++++++++.+
T Consensus         8 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   86 (274)
T 3e03_A            8 TLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG-GQGLALKCDIREEDQVRAAVAATVD   86 (274)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT-SEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC-CeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999998643       455555665554 4589999999999999999999999


Q ss_pred             hcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEE
Q 035504           74 QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNV  153 (174)
Q Consensus        74 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~i  153 (174)
                      ++|++|++|||||+...                   ....+.+.++|++++++|+.++++++|+++|+|++++.|+||++
T Consensus        87 ~~g~iD~lvnnAG~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~i  147 (274)
T 3e03_A           87 TFGGIDILVNNASAIWL-------------------RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTL  147 (274)
T ss_dssp             HHSCCCEEEECCCCCCC-------------------CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEEC
T ss_pred             HcCCCCEEEECCCcccC-------------------CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEE
Confidence            99999999999998543                   12445688899999999999999999999999999888999999


Q ss_pred             ecCCCccc--CCCCcceeeecc
Q 035504          154 SSNMGKLK--NTWQGAICYLTF  173 (174)
Q Consensus       154 sS~~~~~~--~~~~~~y~~~k~  173 (174)
                      ||..+..+  .++...|+.+|+
T Consensus       148 sS~~~~~~~~~~~~~~Y~asKa  169 (274)
T 3e03_A          148 APPPSLNPAWWGAHTGYTLAKM  169 (274)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHH
T ss_pred             CChHhcCCCCCCCCchHHHHHH
Confidence            99999987  677888999985

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.98  E-value=4.2e-32  Score=201.93  Aligned_cols=150  Identities=26%  Similarity=0.322  Sum_probs=133.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.    .++.++.+|++|+++++++++++.+++|++|+
T Consensus        10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A           10 SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG----PAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----CCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999887777666652    35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      ||||||+...                   .++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+.
T Consensus        86 lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (259)
T 4e6p_A           86 LVNNAALFDL-------------------APIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGR  146 (259)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             EEECCCcCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhc
Confidence            9999998542                   2345668889999999999999999999999997765 6899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       147 ~~~~~~~~Y~asK~  160 (259)
T 4e6p_A          147 RGEALVAIYCATKA  160 (259)
T ss_dssp             SCCTTBHHHHHHHH
T ss_pred             cCCCCChHHHHHHH
Confidence            99999999999985

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.98  E-value=2.2e-32  Score=203.50  Aligned_cols=154  Identities=25%  Similarity=0.284  Sum_probs=135.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+. .++..+++....+.++.++.+|++|+++++++++++.+++|++|
T Consensus         6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   85 (260)
T 1x1t_A            6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRID   85 (260)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            48999999999999999999999999999998776 66777777654234588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+...                   .++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+.
T Consensus        86 ~lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (260)
T 1x1t_A           86 ILVNNAGIQHT-------------------ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL  146 (260)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             EEEECCCCCCC-------------------CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhC
Confidence            99999997432                   12345678889999999999999999999999988777999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       147 ~~~~~~~~Y~~sK~  160 (260)
T 1x1t_A          147 VASANKSAYVAAKH  160 (260)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             cCCCCCchHHHHHH
Confidence            99899999999985

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.98  E-value=2.5e-32  Score=201.65  Aligned_cols=153  Identities=29%  Similarity=0.355  Sum_probs=134.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++| +.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|
T Consensus         6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   84 (246)
T 2uvd_A            6 VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG-SDAIAVRADVANAEDVTNMVKQTVDVFGQVD   84 (246)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999999999 7666666677776554 4588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||....                   .++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+.
T Consensus        85 ~lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  145 (246)
T 2uvd_A           85 ILVNNAGVTKD-------------------NLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGV  145 (246)
T ss_dssp             EEEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred             EEEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhc
Confidence            99999998532                   12345678889999999999999999999999988777999999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+.+|+
T Consensus       146 ~~~~~~~~Y~asK~  159 (246)
T 2uvd_A          146 TGNPGQANYVAAKA  159 (246)
T ss_dssp             HCCTTBHHHHHHHH
T ss_pred             CCCCCCchHHHHHH
Confidence            88889999999985

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.98  E-value=1.4e-32  Score=208.62  Aligned_cols=162  Identities=63%  Similarity=0.920  Sum_probs=134.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCCh-hhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP-ATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.+.++.++.++.+|++|. ++++++++++.++++++|
T Consensus        14 ~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD   93 (311)
T 3o26_A           14 CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLD   93 (311)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCC
Confidence            4899999999999999999999999999999998888888888887767799999999998 999999999999999999


Q ss_pred             EEEecccccCccCCCC-----------CccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCC
Q 035504           80 ILVNNAAIFGVSVDGD-----------ALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP  148 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g  148 (174)
                      +||||||+........           .+...........+....+.+.+++++.|++|+.|+++++++++|+|++++.|
T Consensus        94 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~  173 (311)
T 3o26_A           94 ILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSP  173 (311)
T ss_dssp             EEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC
T ss_pred             EEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCC
Confidence            9999999864321000           00000001122244556677899999999999999999999999999988889


Q ss_pred             eEEEEecCCCcccC
Q 035504          149 RIVNVSSNMGKLKN  162 (174)
Q Consensus       149 ~iv~isS~~~~~~~  162 (174)
                      +||++||..+..+.
T Consensus       174 ~IV~isS~~~~~~~  187 (311)
T 3o26_A          174 RIVNVSSSTGSLKY  187 (311)
T ss_dssp             EEEEECCGGGSGGG
T ss_pred             eEEEEecCCccccc
Confidence            99999999987654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.98  E-value=3.6e-32  Score=204.48  Aligned_cols=155  Identities=26%  Similarity=0.387  Sum_probs=126.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|+++++ +.+..++..+++...+ .++.++++|++|+++++++++++.+++|++|
T Consensus        31 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  109 (280)
T 4da9_A           31 VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG-ARVIFLRADLADLSSHQATVDAVVAEFGRID  109 (280)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT-CCEEEEECCTTSGGGHHHHHHHHHHHHSCCC
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999999996 5556667777776655 4599999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC---CCeEEEEecC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD---LPRIVNVSSN  156 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~isS~  156 (174)
                      +||||||+....                 ..++.+.+.++|++.+++|+.|+++++++++|.|++++   .|+||++||.
T Consensus       110 ~lvnnAg~~~~~-----------------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~  172 (280)
T 4da9_A          110 CLVNNAGIASIV-----------------RDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSV  172 (280)
T ss_dssp             EEEEECC-----------------------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_pred             EEEECCCccccC-----------------CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcch
Confidence            999999984321                 12345668899999999999999999999999998755   6899999999


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      .+..+.++...|+++|+
T Consensus       173 ~~~~~~~~~~~Y~asKa  189 (280)
T 4da9_A          173 SAVMTSPERLDYCMSKA  189 (280)
T ss_dssp             -------CCHHHHHHHH
T ss_pred             hhccCCCCccHHHHHHH
Confidence            99999999999999985

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.98  E-value=7.2e-32  Score=200.70  Aligned_cols=153  Identities=29%  Similarity=0.342  Sum_probs=136.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc-CCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF-GKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+++ +++|
T Consensus        11 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   89 (260)
T 2ae2_A           11 TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVANHFHGKLN   89 (260)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence            48999999999999999999999999999999887777777776554 458899999999999999999999999 8999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||+...                   .++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+.
T Consensus        90 ~lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  150 (260)
T 2ae2_A           90 ILVNNAGIVIY-------------------KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA  150 (260)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT
T ss_pred             EEEECCCCCCC-------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc
Confidence            99999998532                   12345678889999999999999999999999988878999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       151 ~~~~~~~~Y~~sK~  164 (260)
T 2ae2_A          151 LAVPYEAVYGATKG  164 (260)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             cCCCCcchHHHHHH
Confidence            98899999999985

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.98  E-value=6.7e-32  Score=200.47  Aligned_cols=153  Identities=22%  Similarity=0.343  Sum_probs=135.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus         4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (256)
T 1geg_A            4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-GHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   82 (256)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999999877777777776654 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      ||||||....                   .++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+.
T Consensus        83 lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  143 (256)
T 1geg_A           83 IVNNAGVAPS-------------------TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH  143 (256)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhc
Confidence            9999997432                   1234567888999999999999999999999998776 6899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       144 ~~~~~~~~Y~asK~  157 (256)
T 1geg_A          144 VGNPELAVYSSSKF  157 (256)
T ss_dssp             SCCTTBHHHHHHHH
T ss_pred             CCCCCchhHHHHHH
Confidence            99899999999985

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.98  E-value=3.7e-32  Score=200.69  Aligned_cols=153  Identities=27%  Similarity=0.309  Sum_probs=138.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++++.+ .++.++.+|++|+++++++++++.++++++|+
T Consensus         7 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (247)
T 3lyl_A            7 VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG-FKARGLVLNISDIESIQNFFAEIKAENLAIDI   85 (247)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHTTCCCSE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999888888878887665 35999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+...                   ....+.+.+++++.+++|+.+++++++.++|.|.+++.|+||++||..+..
T Consensus        86 li~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  146 (247)
T 3lyl_A           86 LVNNAGITRD-------------------NLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA  146 (247)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH
T ss_pred             EEECCCCCCC-------------------CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc
Confidence            9999998542                   123456788999999999999999999999999888889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       147 ~~~~~~~Y~~sK~  159 (247)
T 3lyl_A          147 GNPGQTNYCAAKA  159 (247)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCcHHHHHHHH
Confidence            9999999999985

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.98  E-value=2.5e-32  Score=203.98  Aligned_cols=150  Identities=28%  Similarity=0.326  Sum_probs=125.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.++++++|+
T Consensus        29 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           29 KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL----GKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999987766665544    246899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+....                   .+.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus       105 lvnnAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~  165 (266)
T 3grp_A          105 LVNNAGITRDG-------------------LFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV  165 (266)
T ss_dssp             EEECCCCC------------------------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC----
T ss_pred             EEECCCCCCCC-------------------CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC
Confidence            99999985431                   23456788899999999999999999999999888889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       166 ~~~~~~~Y~asKa  178 (266)
T 3grp_A          166 GNPGQTNYCAAKA  178 (266)
T ss_dssp             ---CHHHHHHHHH
T ss_pred             CCCCchhHHHHHH
Confidence            9999999999985

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.98  E-value=6.8e-32  Score=202.22  Aligned_cols=153  Identities=29%  Similarity=0.279  Sum_probs=136.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc-CCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF-GKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+.+ +++|
T Consensus        23 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id  101 (273)
T 1ae1_A           23 TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-LNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN  101 (273)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             EEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            48999999999999999999999999999999887777777776654 358899999999999999999999999 9999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||....                   .++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+.
T Consensus       102 ~lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~  162 (273)
T 1ae1_A          102 ILVNNAGVVIH-------------------KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGF  162 (273)
T ss_dssp             EEEECCCCCCC-------------------CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGT
T ss_pred             EEEECCCCCCC-------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhc
Confidence            99999998532                   12345678889999999999999999999999988777999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       163 ~~~~~~~~Y~asK~  176 (273)
T 1ae1_A          163 SALPSVSLYSASKG  176 (273)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             CCCCCcchhHHHHH
Confidence            99899999999985

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.98  E-value=5.5e-32  Score=201.13  Aligned_cols=153  Identities=23%  Similarity=0.293  Sum_probs=135.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH--HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR--GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+.  .++..+++...+ .++.++.+|++|+++++++++++.+++|++
T Consensus         4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (258)
T 3a28_C            4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD-QKAVFVGLDVTDKANFDSAIDEAAEKLGGF   82 (258)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            48999999999999999999999999999998766  666666776544 458999999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC-CeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL-PRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~iv~isS~~  157 (174)
                      |+||||||+...                   .++.+.+.++|++.+++|+.++++++++++|.|++++. |+||++||..
T Consensus        83 D~lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  143 (258)
T 3a28_C           83 DVLVNNAGIAQI-------------------KPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIA  143 (258)
T ss_dssp             CEEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGG
T ss_pred             CEEEECCCCCCC-------------------CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcch
Confidence            999999998532                   12345678889999999999999999999999988776 9999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.++...|+.+|+
T Consensus       144 ~~~~~~~~~~Y~~sK~  159 (258)
T 3a28_C          144 AIQGFPILSAYSTTKF  159 (258)
T ss_dssp             GTSCCTTCHHHHHHHH
T ss_pred             hccCCCCchhHHHHHH
Confidence            9999899999999985

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.98  E-value=5.2e-32  Score=201.74  Aligned_cols=154  Identities=27%  Similarity=0.270  Sum_probs=136.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++....+.++.++.+|++|+++++++++++.+++|++|+
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   88 (263)
T 3ai3_A            9 VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADI   88 (263)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999877777777776542345899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                   ++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        89 lv~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  149 (263)
T 3ai3_A           89 LVNNAGTGSNE-------------------TIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ  149 (263)
T ss_dssp             EEECCCCCCCC-------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCCC-------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC
Confidence            99999985321                   23456778899999999999999999999999887779999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       150 ~~~~~~~Y~~sK~  162 (263)
T 3ai3_A          150 PLWYEPIYNVTKA  162 (263)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCcchHHHHHH
Confidence            8888899999985

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.98  E-value=8.3e-32  Score=205.78  Aligned_cols=153  Identities=27%  Similarity=0.344  Sum_probs=133.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC------------hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD------------EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLA   68 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~   68 (174)
                      ++|||||++|||+++|++|+++|++|++++|+            .+...+..+++...+ .++.++.+|++|++++++++
T Consensus        48 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~  126 (317)
T 3oec_A           48 VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG-RRIIARQADVRDLASLQAVV  126 (317)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHH
Confidence            48999999999999999999999999999876            445555666665554 45999999999999999999


Q ss_pred             HHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-C
Q 035504           69 DFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-L  147 (174)
Q Consensus        69 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~  147 (174)
                      +++.+++|++|+||||||+....                   .+.+.+.++|++.|++|+.|+++++++++|.|++++ .
T Consensus       127 ~~~~~~~g~iD~lVnnAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~  187 (317)
T 3oec_A          127 DEALAEFGHIDILVSNVGISNQG-------------------EVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQG  187 (317)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCB-------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCC-------------------CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999999985432                   234667889999999999999999999999997765 6


Q ss_pred             CeEEEEecCCCcccCCCCcceeeecc
Q 035504          148 PRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       148 g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      |+||++||..+..+.++...|+++|+
T Consensus       188 g~Iv~isS~~~~~~~~~~~~Y~asKa  213 (317)
T 3oec_A          188 GSVIFVSSTVGLRGAPGQSHYAASKH  213 (317)
T ss_dssp             EEEEEECCGGGSSCCTTBHHHHHHHH
T ss_pred             CEEEEECcHHhcCCCCCCcchHHHHH
Confidence            89999999999999999999999985

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.97  E-value=1.4e-31  Score=199.61  Aligned_cols=154  Identities=26%  Similarity=0.256  Sum_probs=139.2

Q ss_pred             CEEEecCC-CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGAN-KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+ +|||+++|++|+++|++|++++|+.+...+..+++.+.++.++.++.+|++|+++++++++++.++++++|
T Consensus        24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id  103 (266)
T 3o38_A           24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLD  103 (266)
T ss_dssp             EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCc
Confidence            48999997 69999999999999999999999988888888888777666799999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC-CCCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS-DLPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~isS~~~  158 (174)
                      +||||||+...                   ..+.+.+.+++++.+++|+.++++++++++|+|+++ +.++||++||..+
T Consensus       104 ~li~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~  164 (266)
T 3o38_A          104 VLVNNAGLGGQ-------------------TPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLG  164 (266)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGG
T ss_pred             EEEECCCcCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHH
Confidence            99999998543                   124556888999999999999999999999999887 5689999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       165 ~~~~~~~~~Y~~sKa  179 (266)
T 3o38_A          165 WRAQHSQSHYAAAKA  179 (266)
T ss_dssp             TCCCTTCHHHHHHHH
T ss_pred             cCCCCCCchHHHHHH
Confidence            999999999999985

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.97  E-value=8.9e-32  Score=201.97  Aligned_cols=153  Identities=22%  Similarity=0.269  Sum_probs=134.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+. ++.++++|++|+++++++++++.+++|++|+
T Consensus        34 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~  112 (276)
T 3r1i_A           34 RALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQPDQVRGMLDQMTGELGGIDI  112 (276)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            589999999999999999999999999999998888888888876653 5899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      ||||||+...                   ....+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+.
T Consensus       113 lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~  173 (276)
T 3r1i_A          113 AVCNAGIVSV-------------------QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGH  173 (276)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhc
Confidence            9999998543                   1245668899999999999999999999999998776 4899999999998


Q ss_pred             ccC--CCCcceeeecc
Q 035504          160 LKN--TWQGAICYLTF  173 (174)
Q Consensus       160 ~~~--~~~~~y~~~k~  173 (174)
                      .+.  +....|+.+|+
T Consensus       174 ~~~~~~~~~~Y~asKa  189 (276)
T 3r1i_A          174 IINIPQQVSHYCTSKA  189 (276)
T ss_dssp             SCCCSSCCHHHHHHHH
T ss_pred             ccCCCCCcchHHHHHH
Confidence            754  35678999885

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.97  E-value=1.2e-31  Score=207.02  Aligned_cols=153  Identities=24%  Similarity=0.343  Sum_probs=134.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-------HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-------GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.       ..+..+++...+ .++.++.+|++|+++++++++++.+
T Consensus        47 ~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g-~~~~~~~~Dv~d~~~v~~~~~~~~~  125 (346)
T 3kvo_A           47 TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG-GKALPCIVDVRDEQQISAAVEKAIK  125 (346)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             EEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999998653       445566666654 4589999999999999999999999


Q ss_pred             hcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEE
Q 035504           74 QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNV  153 (174)
Q Consensus        74 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~i  153 (174)
                      ++|++|+||||||+....                   .+.+.+.++|++++++|+.++++++++++|+|++++.|+||++
T Consensus       126 ~~g~iDilVnnAG~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~i  186 (346)
T 3kvo_A          126 KFGGIDILVNNASAISLT-------------------NTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNI  186 (346)
T ss_dssp             HHSCCCEEEECCCCCCCC-------------------CTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred             HcCCCCEEEECCCCCCCC-------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence            999999999999985432                   2456678899999999999999999999999999988999999


Q ss_pred             ecCCCccc--CCCCcceeeecc
Q 035504          154 SSNMGKLK--NTWQGAICYLTF  173 (174)
Q Consensus       154 sS~~~~~~--~~~~~~y~~~k~  173 (174)
                      ||..+..+  .++...|+.+|+
T Consensus       187 SS~~~~~~~~~~~~~~Y~aSKa  208 (346)
T 3kvo_A          187 SPPLNLNPVWFKQHCAYTIAKY  208 (346)
T ss_dssp             CCCCCCCGGGTSSSHHHHHHHH
T ss_pred             CCHHHcCCCCCCCchHHHHHHH
Confidence            99999887  678889999885

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.97  E-value=7.1e-32  Score=202.43  Aligned_cols=152  Identities=20%  Similarity=0.162  Sum_probs=135.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+. +++|+
T Consensus        35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD~  112 (275)
T 4imr_A           35 TALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG-GTAQELAGDLSEAGAGTDLIERAEAI-APVDI  112 (275)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT-CCEEEEECCTTSTTHHHHHHHHHHHH-SCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHh-CCCCE
Confidence            48999999999999999999999999999999888888888887655 45999999999999999999999888 99999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   ..+.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..
T Consensus       113 lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~  173 (275)
T 4imr_A          113 LVINASAQIN-------------------ATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR  173 (275)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC
Confidence            9999998542                   124556888999999999999999999999999888889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+.+|+
T Consensus       174 ~~~~~~~Y~asKa  186 (275)
T 4imr_A          174 PKSVVTAYAATKA  186 (275)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCchhhHHHHH
Confidence            8887788999985

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.97  E-value=4.6e-32  Score=198.83  Aligned_cols=153  Identities=24%  Similarity=0.322  Sum_probs=135.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++....+.++.++.+|++|+++++++++++.+++|++|+
T Consensus         4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (235)
T 3l77_A            4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDV   83 (235)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            48999999999999999999999999999999888888888886444457999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+...                   ..+.+.+.+++++.+++|+.++++++++++|.|+++ .+++|++||..+..
T Consensus        84 li~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~  143 (235)
T 3l77_A           84 VVANAGLGYF-------------------KRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSAR  143 (235)
T ss_dssp             EEECCCCCCC-------------------CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSS
T ss_pred             EEECCccccc-------------------cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhcc
Confidence            9999998542                   224556888999999999999999999999999544 58999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+.+|+
T Consensus       144 ~~~~~~~Y~~sKa  156 (235)
T 3l77_A          144 LIPYGGGYVSTKW  156 (235)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             cCCCcchHHHHHH
Confidence            9999999999985

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.97  E-value=1.1e-31  Score=205.26  Aligned_cols=154  Identities=28%  Similarity=0.300  Sum_probs=138.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCC-ceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+.. ++.++.+|++|+++++++++++.+.++++|
T Consensus        10 ~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   89 (319)
T 3ioy_A           10 TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVS   89 (319)
T ss_dssp             EEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEE
T ss_pred             EEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCC
Confidence            4899999999999999999999999999999988888888888766532 689999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC------CCCeEEEE
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS------DLPRIVNV  153 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~iv~i  153 (174)
                      +||||||+...                   .++.+.+.++++++|++|+.|+++++++++|.|.++      +.|+||++
T Consensus        90 ~lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~i  150 (319)
T 3ioy_A           90 ILCNNAGVNLF-------------------QPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNT  150 (319)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEE
T ss_pred             EEEECCCcCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence            99999998542                   234556788899999999999999999999999764      56999999


Q ss_pred             ecCCCcccCCCCcceeeecc
Q 035504          154 SSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       154 sS~~~~~~~~~~~~y~~~k~  173 (174)
                      ||..+..+.++...|+++|+
T Consensus       151 sS~a~~~~~~~~~~Y~aSKa  170 (319)
T 3ioy_A          151 ASMAAFLAAGSPGIYNTTKF  170 (319)
T ss_dssp             CCGGGTCCCSSSHHHHHHHH
T ss_pred             cccccccCCCCCHHHHHHHH
Confidence            99999999999999999996

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.97  E-value=1.5e-31  Score=202.15  Aligned_cols=165  Identities=19%  Similarity=0.132  Sum_probs=135.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEe-eChhHHHHHHHHHhhcCCCceeEEEeecCChh-----------------
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTA-RDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA-----------------   62 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~-----------------   62 (174)
                      ++|||||++|||++++++|+++|++|++++ |+.+..++..+++....+.++.++++|++|++                 
T Consensus        11 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~   90 (291)
T 1e7w_A           11 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   90 (291)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHH
Confidence            489999999999999999999999999999 98877777777776333456999999999999                 


Q ss_pred             hHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCC---cccccccccCHHHHHHhhHhhhhhHHHHHHhhh
Q 035504           63 TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEP---IKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLI  139 (174)
Q Consensus        63 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  139 (174)
                      +++++++++.+++|++|+||||||+....+        +.+.+.   +......+...++++++|++|+.++++++++++
T Consensus        91 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           91 RCAELVAACYTHWGRCDVLVNNASSFYPTP--------LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCC--------CCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCC--------hhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence            999999999999999999999999854321        111110   000111122378899999999999999999999


Q ss_pred             hhccCCC------CCeEEEEecCCCcccCCCCcceeeecc
Q 035504          140 PLLQLSD------LPRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       140 ~~m~~~~------~g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      |.|++++      .|+||++||..+..+.++...|+++|+
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  202 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG  202 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHH
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHH
Confidence            9998876      699999999999999999999999985

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.97  E-value=8.9e-32  Score=199.83  Aligned_cols=148  Identities=24%  Similarity=0.238  Sum_probs=132.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.    .++.++.+|++|+++++++++++.+++|++|+
T Consensus        10 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A           10 KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG----PRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----CcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999999877776666652    35899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+...                   .++.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||..+..
T Consensus        86 lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~  144 (255)
T 4eso_A           86 LHINAGVSEL-------------------EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEG  144 (255)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSS
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcC
Confidence            9999998542                   23456688899999999999999999999999976  38999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+.+|+
T Consensus       145 ~~~~~~~Y~asKa  157 (255)
T 4eso_A          145 GHPGMSVYSASKA  157 (255)
T ss_dssp             BCTTBHHHHHHHH
T ss_pred             CCCCchHHHHHHH
Confidence            9999999999985

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.97  E-value=1.6e-31  Score=198.82  Aligned_cols=154  Identities=26%  Similarity=0.265  Sum_probs=136.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus        16 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   94 (260)
T 2zat_A           16 VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG-LSVTGTVCHVGKAEDRERLVAMAVNLHGGVDI   94 (260)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999877777777776654 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        95 lv~~Ag~~~~~------------------~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  156 (260)
T 2zat_A           95 LVSNAAVNPFF------------------GNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH  156 (260)
T ss_dssp             EEECCCCCCCC------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCCC------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC
Confidence            99999974311                  123456788899999999999999999999999888889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       157 ~~~~~~~Y~~sK~  169 (260)
T 2zat_A          157 PFPNLGPYNVSKT  169 (260)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCchhHHHHHH
Confidence            8889999999885

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.97  E-value=6.5e-32  Score=201.21  Aligned_cols=154  Identities=23%  Similarity=0.223  Sum_probs=136.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   87 (262)
T 1zem_A            9 VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG-VEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   87 (262)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999999877777777776554 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        88 lv~nAg~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  149 (262)
T 1zem_A           88 LFNNAGYQGAF------------------APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK  149 (262)
T ss_dssp             EEECCCCCCCC------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS
T ss_pred             EEECCCCCCCC------------------CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc
Confidence            99999975211                  123456788899999999999999999999999887779999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       150 ~~~~~~~Y~asK~  162 (262)
T 1zem_A          150 GPPNMAAYGTSKG  162 (262)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCCchHHHHHH
Confidence            8899999999984

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.97  E-value=5.3e-32  Score=200.29  Aligned_cols=151  Identities=26%  Similarity=0.296  Sum_probs=133.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++.    .++.++.+|++|+++++++++++.+++|++|+
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            48999999999999999999999999999999877666665553    35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+....                  .++.+.+.+++++.+++|+.|+++++++++|.|++++.|+||++||..+..
T Consensus        78 lvnnAg~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  139 (248)
T 3asu_A           78 LVNNAGLALGM------------------EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW  139 (248)
T ss_dssp             EEECCCCCCCC------------------SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS
T ss_pred             EEECCCcCCCC------------------CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc
Confidence            99999974211                  123456788999999999999999999999999887779999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       140 ~~~~~~~Y~asKa  152 (248)
T 3asu_A          140 PYAGGNVYGATKA  152 (248)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCchHHHHHH
Confidence            9899999999985

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.97  E-value=1.8e-31  Score=198.78  Aligned_cols=147  Identities=18%  Similarity=0.234  Sum_probs=129.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+...+..++.      ++.++.+|++|+++++++++++.+++|++|+
T Consensus        29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           29 PILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA------GAVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH------TCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc------CCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5899999999999999999999999999999876544333322      2788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+....                    ..+.+.++|++.+++|+.|+++++++++|+|++++.|+||++||..+..
T Consensus       103 lv~nAg~~~~~--------------------~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~  162 (260)
T 3gem_A          103 VVHNASEWLAE--------------------TPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK  162 (260)
T ss_dssp             EEECCCCCCCC--------------------CTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT
T ss_pred             EEECCCccCCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC
Confidence            99999985431                    1234678899999999999999999999999998889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       163 ~~~~~~~Y~asKa  175 (260)
T 3gem_A          163 GSSKHIAYCATKA  175 (260)
T ss_dssp             CCSSCHHHHHHHH
T ss_pred             CCCCcHhHHHHHH
Confidence            9999999999985

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.97  E-value=8.8e-32  Score=199.63  Aligned_cols=153  Identities=25%  Similarity=0.226  Sum_probs=134.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEe-eChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTA-RDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++ |+.+...+..+++...+ .++.++.+|++|+++++++++++.++++++|
T Consensus        15 ~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   93 (256)
T 3ezl_A           15 IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALG-FDFYASEGNVGDWDSTKQAFDKVKAEVGEID   93 (256)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHTCCEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CeeEEEecCCCCHHHHHHHHHHHHHhcCCCC
Confidence            589999999999999999999999999988 45555566666666554 4589999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+....                   .+.+.+.+++++.+++|+.+++++++.++|.|++++.|+||++||..+.
T Consensus        94 ~lv~~Ag~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  154 (256)
T 3ezl_A           94 VLVNNAGITRDV-------------------VFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ  154 (256)
T ss_dssp             EEEECCCCCCCC-------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGG
T ss_pred             EEEECCCCCCCC-------------------chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhc
Confidence            999999985431                   2345678889999999999999999999999998888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       155 ~~~~~~~~Y~asK~  168 (256)
T 3ezl_A          155 KGQFGQTNYSTAKA  168 (256)
T ss_dssp             GSCSCCHHHHHHHH
T ss_pred             cCCCCCcccHHHHH
Confidence            99999999999985

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.97  E-value=9.3e-32  Score=199.57  Aligned_cols=150  Identities=27%  Similarity=0.335  Sum_probs=132.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.+++|++|+
T Consensus         7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            7 TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999977666655554    235888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||....                   .++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        83 lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  143 (254)
T 1hdc_A           83 LVNNAGISTG-------------------MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM  143 (254)
T ss_dssp             EEECCCCCCC-------------------SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc
Confidence            9999997532                   123456788999999999999999999999999887779999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       144 ~~~~~~~Y~asK~  156 (254)
T 1hdc_A          144 GLALTSSYGASKW  156 (254)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCchhHHHHHH
Confidence            8899999999985

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.97  E-value=2.2e-31  Score=198.11  Aligned_cols=153  Identities=19%  Similarity=0.131  Sum_probs=134.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++.... +.++.++.+|++|+++++++++++.+++| +|
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-id   87 (260)
T 2z1n_A            9 LAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-AD   87 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-CS
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-CC
Confidence            48999999999999999999999999999999877777777776542 22688999999999999999999999999 99


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||....                   .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+.
T Consensus        88 ~lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  148 (260)
T 2z1n_A           88 ILVYSTGGPRP-------------------GRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLL  148 (260)
T ss_dssp             EEEECCCCCCC-------------------BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             EEEECCCCCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhc
Confidence            99999997432                   12345678889999999999999999999999988878999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       149 ~~~~~~~~Y~~sK~  162 (260)
T 2z1n_A          149 RPWQDLALSNIMRL  162 (260)
T ss_dssp             SCCTTBHHHHHHTH
T ss_pred             CCCCCCchhHHHHH
Confidence            99899999999985

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.97  E-value=4e-32  Score=202.90  Aligned_cols=147  Identities=25%  Similarity=0.332  Sum_probs=130.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++.       ...++.++.+|++|+++++++++++.+++|++|+
T Consensus        18 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   90 (266)
T 3p19_A           18 LVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-------NLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA   90 (266)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-------CCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-------hcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            489999999999999999999999999999986543322       1235889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+....                   .+.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..
T Consensus        91 lvnnAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~  151 (266)
T 3p19_A           91 IVNNAGMMLLG-------------------QIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKK  151 (266)
T ss_dssp             EEECCCCCCCC-------------------CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS
T ss_pred             EEECCCcCCCC-------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCC
Confidence            99999985432                   23456788899999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       152 ~~~~~~~Y~asK~  164 (266)
T 3p19_A          152 TFPDHAAYCGTKF  164 (266)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCchHHHHHH
Confidence            9999999999985

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.97  E-value=6.3e-32  Score=200.70  Aligned_cols=154  Identities=23%  Similarity=0.210  Sum_probs=126.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.+++|++|+
T Consensus         9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            9 VFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----GAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999887666665555    235889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC------CCCeEEEEe
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS------DLPRIVNVS  154 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~iv~is  154 (174)
                      ||||||......               ......+.+.++|++.+++|+.++++++++++|.|+++      +.|+||++|
T Consensus        85 lv~nAg~~~~~~---------------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~is  149 (257)
T 3tpc_A           85 LVNCAGTAPGEK---------------ILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTA  149 (257)
T ss_dssp             EEECCCCCCCCC---------------SEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEEC
T ss_pred             EEECCCCCCCCc---------------cccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEe
Confidence            999999864321               01122356788999999999999999999999999885      568999999


Q ss_pred             cCCCcccCCCCcceeeecc
Q 035504          155 SNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~~~~~~~~~~y~~~k~  173 (174)
                      |..+..+.++...|+.+|+
T Consensus       150 S~~~~~~~~~~~~Y~asKa  168 (257)
T 3tpc_A          150 SIAAFDGQIGQAAYAASKG  168 (257)
T ss_dssp             CTHHHHCCTTCHHHHHHHH
T ss_pred             chhhccCCCCCcchHHHHH
Confidence            9999999999999999985

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.97  E-value=2e-31  Score=200.14  Aligned_cols=153  Identities=29%  Similarity=0.338  Sum_probs=135.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++.+.+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus        24 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (277)
T 2rhc_B           24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-VEADGRTCDVRSVPEIEALVAAVVERYGPVDV  102 (277)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999999877777777776654 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhh--ccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPL--LQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--m~~~~~g~iv~isS~~~  158 (174)
                      ||||||+...                   .++.+.+.++|++.+++|+.++++++++++|.  |++++.|+||++||..+
T Consensus       103 lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~  163 (277)
T 2rhc_B          103 LVNNAGRPGG-------------------GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGG  163 (277)
T ss_dssp             EEECCCCCCC-------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGG
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccc
Confidence            9999997432                   12345678889999999999999999999999  98777799999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+++|+
T Consensus       164 ~~~~~~~~~Y~asK~  178 (277)
T 2rhc_B          164 KQGVVHAAPYSASKH  178 (277)
T ss_dssp             TSCCTTCHHHHHHHH
T ss_pred             ccCCCCCccHHHHHH
Confidence            999899999999985

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.97  E-value=2.4e-31  Score=197.21  Aligned_cols=149  Identities=25%  Similarity=0.289  Sum_probs=132.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.+++|++|+
T Consensus         8 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            8 VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999987666666655    245889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                   ++.+.+.+++++.+++|+.++++++++++|.|++++ |+||++||..+..
T Consensus        84 lv~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~  143 (253)
T 1hxh_A           84 LVNNAGILLPG-------------------DMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWL  143 (253)
T ss_dssp             EEECCCCCCCB-------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTS
T ss_pred             EEECCCCCCCC-------------------CcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcC
Confidence            99999985321                   234567888999999999999999999999999887 9999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       144 ~~~~~~~Y~~sK~  156 (253)
T 1hxh_A          144 PIEQYAGYSASKA  156 (253)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCCccHHHHHH
Confidence            9899999999985

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.97  E-value=1.9e-31  Score=197.38  Aligned_cols=150  Identities=25%  Similarity=0.329  Sum_probs=130.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+. +..++   ++.+.+ .++.++.+|++|+++++++++++.++++++|
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            9 LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLG-RRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcC-CcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            489999999999999999999999999999987 54443   333333 4588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+...                   .++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+.
T Consensus        85 ~lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  145 (249)
T 2ew8_A           85 ILVNNAGIYPL-------------------IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYW  145 (249)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG
T ss_pred             EEEECCCCCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc
Confidence            99999998532                   12345678889999999999999999999999988777999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       146 ~~~~~~~~Y~asK~  159 (249)
T 2ew8_A          146 LKIEAYTHYISTKA  159 (249)
T ss_dssp             SCCSSCHHHHHHHH
T ss_pred             cCCCCchhHHHHHH
Confidence            99899999999985

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.97  E-value=1.1e-31  Score=201.15  Aligned_cols=153  Identities=26%  Similarity=0.261  Sum_probs=135.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...  .++.++.+|++|+++++++++++.+++|++|+
T Consensus        23 ~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           23 TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK--TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             EEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4899999999999999999999999999999987777777766543  35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCC-eEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP-RIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~iv~isS~~~~  159 (174)
                      ||||||+....                  .++.+.+.+++++++++|+.++++++++++|.|++++.| +||++||..+.
T Consensus       101 lvnnAG~~~~~------------------~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~  162 (272)
T 2nwq_A          101 LINNAGLALGT------------------DPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGK  162 (272)
T ss_dssp             EEECCCCCCCC------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGT
T ss_pred             EEECCCCCCCC------------------CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhc
Confidence            99999974321                  123456788999999999999999999999999887778 99999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       163 ~~~~~~~~Y~asKa  176 (272)
T 2nwq_A          163 WPYPGSHVYGGTKA  176 (272)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             cCCCCCchHHHHHH
Confidence            99899999999985

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.97  E-value=5.2e-31  Score=197.14  Aligned_cols=151  Identities=25%  Similarity=0.253  Sum_probs=131.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++++ .+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|
T Consensus        20 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   98 (270)
T 3is3_A           20 VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG-SDAIAIKADIRQVPEIVKLFDQAVAHFGHLD   98 (270)
T ss_dssp             EEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999998775 444566667776655 4599999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC-C
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM-G  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~-~  158 (174)
                      +||||||+...                   ..+.+.+.++|++.+++|+.|+++++++++|.|++  .|+||++||.. +
T Consensus        99 ~lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~  157 (270)
T 3is3_A           99 IAVSNSGVVSF-------------------GHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSK  157 (270)
T ss_dssp             EEECCCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTT
T ss_pred             EEEECCCCCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhc
Confidence            99999998532                   23456688999999999999999999999999976  48999999998 5


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       158 ~~~~~~~~~Y~asKa  172 (270)
T 3is3_A          158 DFSVPKHSLYSGSKG  172 (270)
T ss_dssp             TCCCTTCHHHHHHHH
T ss_pred             cCCCCCCchhHHHHH
Confidence            668889999999985

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.97  E-value=3.8e-31  Score=195.91  Aligned_cols=153  Identities=27%  Similarity=0.337  Sum_probs=125.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.++++++|+
T Consensus        11 ~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (253)
T 3qiv_A           11 VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG-GTAISVAVDVSDPESAKAMADRTLAEFGGIDY   89 (253)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999888888888887665 45899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+.....                .....+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+. 
T Consensus        90 li~~Ag~~~~~~----------------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-  152 (253)
T 3qiv_A           90 LVNNAAIFGGMK----------------LDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW-  152 (253)
T ss_dssp             EEECCCCCCGGG----------------GGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----
T ss_pred             EEECCCcCCCCC----------------CcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc-
Confidence            999999843211                123456688899999999999999999999999998888999999999887 


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                        +....|+.+|+
T Consensus       153 --~~~~~Y~asK~  163 (253)
T 3qiv_A          153 --LYSNYYGLAKV  163 (253)
T ss_dssp             ---------CCHH
T ss_pred             --CCCchhHHHHH
Confidence              45678999985

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.97  E-value=3.1e-31  Score=200.38  Aligned_cols=153  Identities=20%  Similarity=0.178  Sum_probs=131.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+...+...+..+..+.++.++.+|++|+++++++++++.+++|++|+
T Consensus        49 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  128 (291)
T 3ijr_A           49 NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI  128 (291)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998765444444333333456999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||...+.                  ..+.+.+.++|++.+++|+.++++++++++|+|++  .|+||++||..+..
T Consensus       129 lvnnAg~~~~~------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~  188 (291)
T 3ijr_A          129 LVNNVAQQYPQ------------------QGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYE  188 (291)
T ss_dssp             EEECCCCCCCC------------------SSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHH
T ss_pred             EEECCCCcCCC------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcC
Confidence            99999985431                  12455688899999999999999999999999964  48999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       189 ~~~~~~~Y~asKa  201 (291)
T 3ijr_A          189 GNETLIDYSATKG  201 (291)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCChhHHHHHH
Confidence            9999999999985

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.97  E-value=1.6e-31  Score=200.57  Aligned_cols=152  Identities=27%  Similarity=0.265  Sum_probs=133.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+  ++.++.+|++|+++++++++++.+.++++|+
T Consensus        31 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  108 (276)
T 2b4q_A           31 IALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSSEAGARRLAQALGELSARLDI  108 (276)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            48999999999999999999999999999999877777777775533  5888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC----CeEEEEecC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL----PRIVNVSSN  156 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~----g~iv~isS~  156 (174)
                      ||||||+....                   ++.+.+.++|++.+++|+.++++++++++|.|++++.    |+||++||.
T Consensus       109 lvnnAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~  169 (276)
T 2b4q_A          109 LVNNAGTSWGA-------------------ALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSV  169 (276)
T ss_dssp             EEECCCCCCCC-------------------CTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCG
T ss_pred             EEECCCCCCCC-------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCH
Confidence            99999975421                   2345567888899999999999999999999987665    899999999


Q ss_pred             CCcccCCCCc-ceeeecc
Q 035504          157 MGKLKNTWQG-AICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~-~y~~~k~  173 (174)
                      .+..+.++.. .|+.+|+
T Consensus       170 ~~~~~~~~~~~~Y~asK~  187 (276)
T 2b4q_A          170 AGISAMGEQAYAYGPSKA  187 (276)
T ss_dssp             GGTCCCCCSCTTHHHHHH
T ss_pred             HHcCCCCCCccccHHHHH
Confidence            9998888888 9999985

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.8e-31  Score=198.06  Aligned_cols=150  Identities=23%  Similarity=0.260  Sum_probs=132.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||+++|++|+++|  ++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.+++|++
T Consensus         4 ~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----GDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             EEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH----GGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh----CCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            58999999999999999999985  78999999987766666555    2468999999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||+..+.                  .++.+.+.++|++.+++|+.|+++++++++|+|++++ |+||++||..+
T Consensus        80 d~lvnnAg~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~  140 (254)
T 3kzv_A           80 DSLVANAGVLEPV------------------QNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDAC  140 (254)
T ss_dssp             CEEEEECCCCCCC------------------TTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCC
T ss_pred             cEEEECCcccCCC------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchh
Confidence            9999999985431                  2345668889999999999999999999999998876 99999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       141 ~~~~~~~~~Y~asK~  155 (254)
T 3kzv_A          141 NMYFSSWGAYGSSKA  155 (254)
T ss_dssp             CCSSCCSHHHHHHHH
T ss_pred             ccCCCCcchHHHHHH
Confidence            999999999999985

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=4.4e-31  Score=200.12  Aligned_cols=155  Identities=25%  Similarity=0.279  Sum_probs=135.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCC--ceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD--SVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+..  ++.++.+|++|+++++++++++.+++|++
T Consensus        28 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  107 (297)
T 1xhl_A           28 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKI  107 (297)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            4899999999999999999999999999999988777777777665431  58899999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||+....+                 ..+.+.+.++|++.+++|+.++++++++++|.|++++ |+||++||..+
T Consensus       108 D~lvnnAG~~~~~~-----------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~  169 (297)
T 1xhl_A          108 DILVNNAGANLADG-----------------TANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVA  169 (297)
T ss_dssp             CEEEECCCCCCCCS-----------------CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGG
T ss_pred             CEEEECCCcCcCCC-----------------CccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchh
Confidence            99999999753210                 0134567889999999999999999999999998777 99999999999


Q ss_pred             cccC-CCCcceeeecc
Q 035504          159 KLKN-TWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~-~~~~~y~~~k~  173 (174)
                      ..+. ++...|+++|+
T Consensus       170 ~~~~~~~~~~Y~asKa  185 (297)
T 1xhl_A          170 GPQAHSGYPYYACAKA  185 (297)
T ss_dssp             SSSCCTTSHHHHHHHH
T ss_pred             ccCCCCCcchHHHHHH
Confidence            8887 88899999985

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.97  E-value=4.6e-31  Score=196.20  Aligned_cols=156  Identities=24%  Similarity=0.225  Sum_probs=135.5

Q ss_pred             CEEEecCCCchhHHHHHHHHH---CCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHh--h
Q 035504            1 YAVVTGANKGIGYETVRQLAS---NGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRS--Q   74 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~---~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~--~   74 (174)
                      ++|||||++|||++++++|++   +|++|++++|+.+..++..+++.... +.++.++.+|++|+++++++++++.+  .
T Consensus         8 ~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   87 (259)
T 1oaa_A            8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPR   87 (259)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccc
Confidence            489999999999999999999   89999999999887777777776653 34688999999999999999999998  7


Q ss_pred             cCCcc--EEEecccccCccCCCCCccccccCCCCcccccccc-cCHHHHHHhhHhhhhhHHHHHHhhhhhccCC--CCCe
Q 035504           75 FGKLD--ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT-PTYELAEKCLRTNYYGSKRMCEVLIPLLQLS--DLPR  149 (174)
Q Consensus        75 ~g~id--~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~--~~g~  149 (174)
                      +|++|  +||||||+.....                 .++.+ .+.++++++|++|+.|+++++++++|.|+++  +.|+
T Consensus        88 ~g~~d~~~lvnnAg~~~~~~-----------------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~  150 (259)
T 1oaa_A           88 PEGLQRLLLINNAATLGDVS-----------------KGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKT  150 (259)
T ss_dssp             CTTCCEEEEEECCCCCCCCS-----------------SCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred             cccCCccEEEECCcccCCCC-----------------cchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCce
Confidence            78999  9999999843210                 12334 4778899999999999999999999999887  5689


Q ss_pred             EEEEecCCCcccCCCCcceeeecc
Q 035504          150 IVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       150 iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      ||++||..+..+.++...|+++|+
T Consensus       151 iv~isS~~~~~~~~~~~~Y~asKa  174 (259)
T 1oaa_A          151 VVNISSLCALQPYKGWGLYCAGKA  174 (259)
T ss_dssp             EEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             EEEEcCchhcCCCCCccHHHHHHH
Confidence            999999999999999999999985

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.97  E-value=4e-31  Score=198.15  Aligned_cols=164  Identities=20%  Similarity=0.198  Sum_probs=130.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCCh----hhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADP----ATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~----~~i~~~~~~~~~~~   75 (174)
                      ++|||||++|||++++++|+++|++|++++| +.+..++..+++....+.++.++.+|++|+    ++++++++++.+++
T Consensus        13 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~   92 (276)
T 1mxh_A           13 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   92 (276)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhc
Confidence            4899999999999999999999999999999 877777777777665335689999999999    99999999999999


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC------Ce
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL------PR  149 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~------g~  149 (174)
                      |++|+||||||+....+        +.+.++.......+...+++++++++|+.++++++++++|.|+ ++.      |+
T Consensus        93 g~id~lv~nAg~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~  163 (276)
T 1mxh_A           93 GRCDVLVNNASAYYPTP--------LLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLS  163 (276)
T ss_dssp             SCCCEEEECCCCCCCCC--------SCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEE
T ss_pred             CCCCEEEECCCCCCCCC--------ccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcE
Confidence            99999999999854321        1111110011111223388999999999999999999999998 555      89


Q ss_pred             EEEEecCCCcccCCCCcceeeecc
Q 035504          150 IVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       150 iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      ||++||..+..+.++...|+.+|+
T Consensus       164 iv~isS~~~~~~~~~~~~Y~asK~  187 (276)
T 1mxh_A          164 VVNLCDAMTDLPLPGFCVYTMAKH  187 (276)
T ss_dssp             EEEECCGGGGSCCTTCHHHHHHHH
T ss_pred             EEEECchhhcCCCCCCeehHHHHH
Confidence            999999999999999999999985

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.97  E-value=1.8e-31  Score=198.59  Aligned_cols=152  Identities=22%  Similarity=0.203  Sum_probs=131.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|+++++ +.+..++..+++.+.+ .++.++.+|++|+++++++++++.+++|++|
T Consensus        10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   88 (259)
T 3edm_A           10 TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG-RSALAIKADLTNAAEVEAAISAAADKFGEIH   88 (259)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT-SCCEEEECCTTCHHHHHHHHHHHHHHHCSEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999844 5555666666776654 4589999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....                  ..+.+.+.++|++.+++|+.|+++++++++|.|++  .|+||++||..+.
T Consensus        89 ~lv~nAg~~~~~------------------~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~  148 (259)
T 3edm_A           89 GLVHVAGGLIAR------------------KTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGR  148 (259)
T ss_dssp             EEEECCCCCCCC------------------CCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHH
T ss_pred             EEEECCCccCCC------------------CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhc
Confidence            999999975321                  23456678899999999999999999999999976  4899999999998


Q ss_pred             -ccCCCCcceeeecc
Q 035504          160 -LKNTWQGAICYLTF  173 (174)
Q Consensus       160 -~~~~~~~~y~~~k~  173 (174)
                       .+.++...|+++|+
T Consensus       149 ~~~~~~~~~Y~asKa  163 (259)
T 3edm_A          149 DGGGPGALAYATSKG  163 (259)
T ss_dssp             HCCSTTCHHHHHHHH
T ss_pred             cCCCCCcHHHHHHHH
Confidence             67888899999985

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.97  E-value=2.7e-31  Score=197.09  Aligned_cols=151  Identities=28%  Similarity=0.368  Sum_probs=132.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+  ++..+++...+ .++.++.+|++|+++++++++++.+++|++|+
T Consensus         6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            6 TALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHG-VKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTS-CCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcC-CceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999865  44555565443 45888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+...                   .++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        83 lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  143 (255)
T 2q2v_A           83 LVNNAGIQHV-------------------APVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV  143 (255)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhcc
Confidence            9999997532                   123456788899999999999999999999999888889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       144 ~~~~~~~Y~~sK~  156 (255)
T 2q2v_A          144 GSTGKAAYVAAKH  156 (255)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCchhHHHHHH
Confidence            8899999999885

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.97  E-value=1.9e-31  Score=200.15  Aligned_cols=149  Identities=23%  Similarity=0.245  Sum_probs=129.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC------------hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD------------EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLA   68 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~   68 (174)
                      ++|||||++|||+++|++|+++|++|++++|+            .+..++..+++...+ .++.++.+|++|++++++++
T Consensus        15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~   93 (278)
T 3sx2_A           15 VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG-SRIVARQADVRDRESLSAAL   93 (278)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT-CCEEEEECCTTCHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC-CeEEEEeCCCCCHHHHHHHH
Confidence            48999999999999999999999999999987            555566666666555 45999999999999999999


Q ss_pred             HHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-C
Q 035504           69 DFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-L  147 (174)
Q Consensus        69 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~  147 (174)
                      +++.+++|++|+||||||+....                       .+.++|++.|++|+.++++++++++|+|++++ .
T Consensus        94 ~~~~~~~g~id~lv~nAg~~~~~-----------------------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  150 (278)
T 3sx2_A           94 QAGLDELGRLDIVVANAGIAPMS-----------------------AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTG  150 (278)
T ss_dssp             HHHHHHHCCCCEEEECCCCCCCS-----------------------STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCC-----------------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999984321                       13678899999999999999999999998764 6


Q ss_pred             CeEEEEecCCCcccC----CCCcceeeecc
Q 035504          148 PRIVNVSSNMGKLKN----TWQGAICYLTF  173 (174)
Q Consensus       148 g~iv~isS~~~~~~~----~~~~~y~~~k~  173 (174)
                      |+||++||..+..+.    ++...|+++|+
T Consensus       151 g~iv~isS~~~~~~~~~~~~~~~~Y~asKa  180 (278)
T 3sx2_A          151 GSIVLISSSAGLAGVGSADPGSVGYVAAKH  180 (278)
T ss_dssp             EEEEEECCGGGTSCCCCSSHHHHHHHHHHH
T ss_pred             cEEEEEccHHhcCCCccCCCCchHhHHHHH
Confidence            899999999998876    67788999885

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.97  E-value=2.8e-31  Score=199.02  Aligned_cols=151  Identities=22%  Similarity=0.174  Sum_probs=131.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+ +..++..+++...+ .++.++.+|++|+++++++ .+..++++++|+
T Consensus        33 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~-~~~~~~~g~iD~  109 (273)
T 3uf0_A           33 TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGG-GSAEAVVADLADLEGAANV-AEELAATRRVDV  109 (273)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTT-CEEEEEECCTTCHHHHHHH-HHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHH-HHHHHhcCCCcE
Confidence            48999999999999999999999999999966 44566667776554 4589999999999999999 455567799999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+...                   .+..+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..
T Consensus       110 lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~  170 (273)
T 3uf0_A          110 LVNNAGIIAR-------------------APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ  170 (273)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCC-------------------CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC
Confidence            9999998543                   134566889999999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       171 ~~~~~~~Y~asKa  183 (273)
T 3uf0_A          171 GGRNVAAYAASKH  183 (273)
T ss_dssp             CCSSCHHHHHHHH
T ss_pred             CCCCChhHHHHHH
Confidence            9999999999985

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=4.6e-31  Score=195.99  Aligned_cols=147  Identities=24%  Similarity=0.267  Sum_probs=129.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+. ++..+++.     + .++.+|++|+++++++++++.+++|++|+
T Consensus         8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A            8 GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-----G-AFFQVDLEDERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-----C-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-----C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998766 55555543     3 77899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   +..+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        81 lv~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~  141 (256)
T 2d1y_A           81 LVNNAAIAAPG-------------------SALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF  141 (256)
T ss_dssp             EEECCCCCCCB-------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC
Confidence            99999985321                   23455778899999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       142 ~~~~~~~Y~~sK~  154 (256)
T 2d1y_A          142 AEQENAAYNASKG  154 (256)
T ss_dssp             BCTTBHHHHHHHH
T ss_pred             CCCCChhHHHHHH
Confidence            9899999999985

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.97  E-value=3.6e-31  Score=197.02  Aligned_cols=150  Identities=25%  Similarity=0.329  Sum_probs=132.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++..    ++.++.+|++|+++++++++++.+++|++|+
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            9 VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD----AARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG----GEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc----CceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            489999999999999999999999999999998776666655532    4788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   ++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        85 lv~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  145 (260)
T 1nff_A           85 LVNNAGILNIG-------------------TIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA  145 (260)
T ss_dssp             EEECCCCCCCB-------------------CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcC
Confidence            99999985321                   23456778899999999999999999999999887779999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       146 ~~~~~~~Y~~sK~  158 (260)
T 1nff_A          146 GTVACHGYTATKF  158 (260)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCchhHHHHHH
Confidence            8888899999885

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.97  E-value=3.7e-31  Score=197.63  Aligned_cols=150  Identities=19%  Similarity=0.214  Sum_probs=132.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...++ ..+..+.+|++|++++++++    ++++++|
T Consensus        12 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~----~~~g~id   87 (267)
T 3t4x_A           12 TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI----EKYPKVD   87 (267)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHH----HHCCCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHH----HhcCCCC
Confidence            489999999999999999999999999999998888888888877653 35788999999999887665    4689999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||+..+.                   +..+.+.++|++.|++|+.++++++|+++|.|++++.|+||++||..+.
T Consensus        88 ~lv~nAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  148 (267)
T 3t4x_A           88 ILINNLGIFEPV-------------------EYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAI  148 (267)
T ss_dssp             EEEECCCCCCCC-------------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGT
T ss_pred             EEEECCCCCCCC-------------------ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhc
Confidence            999999985432                   2345678899999999999999999999999998888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       149 ~~~~~~~~Y~asKa  162 (267)
T 3t4x_A          149 MPSQEMAHYSATKT  162 (267)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             cCCCcchHHHHHHH
Confidence            99999999999985

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=4.7e-31  Score=198.27  Aligned_cols=157  Identities=26%  Similarity=0.231  Sum_probs=135.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCC--ceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD--SVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+..  ++.++.+|++|+++++++++++.+++|++
T Consensus         8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (280)
T 1xkq_A            8 TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKI   87 (280)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            4899999999999999999999999999999988777777777655431  58899999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||.....+.               ...+.+.+.+++++.+++|+.++++++++++|.|++++ |+||++||..+
T Consensus        88 D~lv~nAg~~~~~~~---------------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~  151 (280)
T 1xkq_A           88 DVLVNNAGAAIPDAF---------------GTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVA  151 (280)
T ss_dssp             CEEEECCCCCCCCTT---------------CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG
T ss_pred             CEEEECCCCCCCCCC---------------CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccc
Confidence            999999998542110               01134567889999999999999999999999998776 99999999999


Q ss_pred             cccC-CCCcceeeecc
Q 035504          159 KLKN-TWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~-~~~~~y~~~k~  173 (174)
                      ..+. ++...|+++|+
T Consensus       152 ~~~~~~~~~~Y~asK~  167 (280)
T 1xkq_A          152 GPQAQPDFLYYAIAKA  167 (280)
T ss_dssp             SSSCCCSSHHHHHHHH
T ss_pred             cCCCCCcccHHHHHHH
Confidence            8887 88899999985

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.97  E-value=3.9e-31  Score=202.57  Aligned_cols=153  Identities=18%  Similarity=0.197  Sum_probs=130.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-----hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-----EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      ++|||||++|||+++|++|+++|++|++++|+     .+..++..+.+...+ .++.++.+|++|+++++++++++.+++
T Consensus         7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~Dvtd~~~v~~~~~~~~~~~   85 (324)
T 3u9l_A            7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDND-VDLRTLELDVQSQVSVDRAIDQIIGED   85 (324)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcC-CcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            48999999999999999999999999998886     233344444444444 459999999999999999999999999


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS  155 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS  155 (174)
                      |++|+||||||+...                   .+..+.+.++++++|++|+.|+++++++++|+|++++.|+||++||
T Consensus        86 g~iD~lVnnAG~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS  146 (324)
T 3u9l_A           86 GRIDVLIHNAGHMVF-------------------GPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISS  146 (324)
T ss_dssp             SCCSEEEECCCCCBC-------------------SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCCEEEECCCcCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence            999999999998542                   2345668889999999999999999999999999888899999999


Q ss_pred             CCCcc-cCCCCcceeeecc
Q 035504          156 NMGKL-KNTWQGAICYLTF  173 (174)
Q Consensus       156 ~~~~~-~~~~~~~y~~~k~  173 (174)
                      ..+.. +.++...|+++|+
T Consensus       147 ~~~~~~~~~~~~~Y~asKa  165 (324)
T 3u9l_A          147 SSSAGGTPPYLAPYFAAKA  165 (324)
T ss_dssp             GGGTSCCCSSCHHHHHHHH
T ss_pred             chhccCCCCcchhHHHHHH
Confidence            99985 4567788999985

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.97  E-value=1.9e-31  Score=199.55  Aligned_cols=153  Identities=24%  Similarity=0.249  Sum_probs=134.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.++ .++..++++..+ .++.++.+|++|+++++++++++.+.++++|
T Consensus        31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id  109 (271)
T 4iin_A           31 NVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG-YKAAVIKFDAASESDFIEAIQTIVQSDGGLS  109 (271)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            48999999999999999999999999999995444 444455555544 4699999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||+....                   ...+.+.+++++.+++|+.+++++++.++|.|++++.|+||++||..+.
T Consensus       110 ~li~nAg~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  170 (271)
T 4iin_A          110 YLVNNAGVVRDK-------------------LAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGE  170 (271)
T ss_dssp             EEEECCCCCCCC-------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             EEEECCCcCCCc-------------------ccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhc
Confidence            999999985431                   2345678899999999999999999999999998888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       171 ~~~~~~~~Y~asK~  184 (271)
T 4iin_A          171 RGNMGQTNYSASKG  184 (271)
T ss_dssp             HCCTTCHHHHHHHH
T ss_pred             CCCCCchHhHHHHH
Confidence            99999999999985

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.97  E-value=2.2e-31  Score=198.47  Aligned_cols=151  Identities=17%  Similarity=0.198  Sum_probs=126.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh---hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE---KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++|||||++|||+++|++|+++|++|++++|..   +..++..+++...+ .++.++.+|++|+++++++++++.+++|+
T Consensus        13 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   91 (262)
T 3ksu_A           13 VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG-AKVALYQSDLSNEEEVAKLFDFAEKEFGK   91 (262)
T ss_dssp             EEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT-CEEEEEECCCCSHHHHHHHHHHHHHHHCS
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            489999999999999999999999999987753   34555666666554 46999999999999999999999999999


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|+||||||+...                   .++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..
T Consensus        92 iD~lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~isS~~  150 (262)
T 3ksu_A           92 VDIAINTVGKVLK-------------------KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP--NGHIITIATSL  150 (262)
T ss_dssp             EEEEEECCCCCCS-------------------SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEEEEEECCCH
T ss_pred             CCEEEECCCCCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCEEEEEechh
Confidence            9999999998543                   13456688899999999999999999999999943  48999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.++...|+++|+
T Consensus       151 ~~~~~~~~~~Y~asKa  166 (262)
T 3ksu_A          151 LAAYTGFYSTYAGNKA  166 (262)
T ss_dssp             HHHHHCCCCC-----C
T ss_pred             hccCCCCCchhHHHHH
Confidence            9999899999999996

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.97  E-value=5.1e-31  Score=198.85  Aligned_cols=164  Identities=21%  Similarity=0.223  Sum_probs=132.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-hHHHHHHHHHhhcCCCceeEEEeecCC----hhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHSGFDSVIFHQLDVAD----PATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~----~~~i~~~~~~~~~~~   75 (174)
                      ++|||||++|||+++|++|+++|++|++++|+. +..++..+++....+.++.++.+|++|    +++++++++++.+.+
T Consensus        25 ~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~  104 (288)
T 2x9g_A           25 AAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAF  104 (288)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHhc
Confidence            489999999999999999999999999999997 667777777763344569999999999    999999999999999


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC------CCe
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD------LPR  149 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~------~g~  149 (174)
                      |++|+||||||+....+        +.+....+ ......+.+++++.+++|+.+++++++.++|.|++++      .|+
T Consensus       105 g~iD~lvnnAG~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~  175 (288)
T 2x9g_A          105 GRCDVLVNNASAFYPTP--------LVQGDHED-NSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLS  175 (288)
T ss_dssp             SCCCEEEECCCCCCCCC--------SCCC---------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEE
T ss_pred             CCCCEEEECCCCCCCCc--------cccccchh-cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeE
Confidence            99999999999854321        10000000 0011157788999999999999999999999998876      689


Q ss_pred             EEEEecCCCcccCCCCcceeeecc
Q 035504          150 IVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       150 iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      ||++||..+..+.++...|+++|+
T Consensus       176 iv~isS~~~~~~~~~~~~Y~asKa  199 (288)
T 2x9g_A          176 IVNLCDAMVDQPCMAFSLYNMGKH  199 (288)
T ss_dssp             EEEECCTTTTSCCTTCHHHHHHHH
T ss_pred             EEEEecccccCCCCCCchHHHHHH
Confidence            999999999999999999999985

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.97  E-value=2.1e-31  Score=199.10  Aligned_cols=151  Identities=28%  Similarity=0.388  Sum_probs=131.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|+++++ +.+..++..+++...+ .++.++.+|++|+++++++++++.+++|++|
T Consensus        29 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  107 (267)
T 3u5t_A           29 VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG-GKALTAQADVSDPAAVRRLFATAEEAFGGVD  107 (267)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999998855 4445566666666655 4589999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+...                   .++.+.+.++|++.|++|+.|+++++++++|.|++  .|+||++||..+.
T Consensus       108 ~lvnnAG~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~  166 (267)
T 3u5t_A          108 VLVNNAGIMPL-------------------TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVG  166 (267)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHH
T ss_pred             EEEECCCCCCC-------------------CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhc
Confidence            99999998532                   23456678899999999999999999999999975  3899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+++|+
T Consensus       167 ~~~~~~~~Y~asKa  180 (267)
T 3u5t_A          167 LLHPSYGIYAAAKA  180 (267)
T ss_dssp             HCCTTCHHHHHHHH
T ss_pred             cCCCCchHHHHHHH
Confidence            99999999999985

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=6.5e-31  Score=194.04  Aligned_cols=147  Identities=27%  Similarity=0.213  Sum_probs=129.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++      .+.++.+|++|+++++++++++.+++|++|+
T Consensus         7 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A            7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------GAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------TCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999876655554433      2778899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||....                   ..+.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.. ..
T Consensus        81 lvn~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~  140 (245)
T 1uls_A           81 VVHYAGITRD-------------------NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YL  140 (245)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GG
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hc
Confidence            9999997532                   123456788899999999999999999999999988889999999999 88


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       141 ~~~~~~~Y~asK~  153 (245)
T 1uls_A          141 GNLGQANYAASMA  153 (245)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCchhHHHHHH
Confidence            8888899999885

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.97  E-value=1.7e-30  Score=194.60  Aligned_cols=151  Identities=24%  Similarity=0.267  Sum_probs=130.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++++. +..++..+++...+ .++.++.+|++|+++++++++++.+++|++|
T Consensus        33 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  111 (271)
T 3v2g_A           33 TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG-GRAVAIRADNRDAEAIEQAIRETVEALGGLD  111 (271)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence            489999999999999999999999999997764 45566667776655 4589999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+...                   .++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+.
T Consensus       112 ~lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~  170 (271)
T 3v2g_A          112 ILVNSAGIWHS-------------------APLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAE  170 (271)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGT
T ss_pred             EEEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhc
Confidence            99999998542                   13456688899999999999999999999999965  4899999998877


Q ss_pred             cc-CCCCcceeeecc
Q 035504          160 LK-NTWQGAICYLTF  173 (174)
Q Consensus       160 ~~-~~~~~~y~~~k~  173 (174)
                      .+ .++...|+.+|+
T Consensus       171 ~~~~~~~~~Y~asKa  185 (271)
T 3v2g_A          171 LVPWPGISLYSASKA  185 (271)
T ss_dssp             CCCSTTCHHHHHHHH
T ss_pred             cCCCCCchHHHHHHH
Confidence            65 688899999985

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.97  E-value=5.5e-31  Score=198.09  Aligned_cols=154  Identities=21%  Similarity=0.182  Sum_probs=131.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.+++|++|+
T Consensus         7 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            7 VALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----GGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----BTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc----CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4899999999999999999999999999999977665554443    346899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+......       +.       ....+.+.++|+++|++|+.++++++++++|+|++++ |+||++||..+..
T Consensus        83 lvnnAg~~~~~~~-------~~-------~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~  147 (281)
T 3zv4_A           83 LIPNAGIWDYSTA-------LA-------DLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFY  147 (281)
T ss_dssp             EECCCCCCCTTCC-------GG-------GSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTS
T ss_pred             EEECCCcCccccc-------cc-------cCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhcc
Confidence            9999998543211       00       1123445678999999999999999999999998765 9999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       148 ~~~~~~~Y~asKa  160 (281)
T 3zv4_A          148 PNGGGPLYTATKH  160 (281)
T ss_dssp             SSSSCHHHHHHHH
T ss_pred             CCCCCchhHHHHH
Confidence            9999999999985

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.97  E-value=1.2e-30  Score=197.50  Aligned_cols=152  Identities=22%  Similarity=0.205  Sum_probs=130.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh--HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK--RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||+++|++|+++|++|++++|+..  ..++..+.+...+ .++.++.+|++|+++++++++++.+++|++
T Consensus        51 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  129 (294)
T 3r3s_A           51 KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG-RKAVLLPGDLSDESFARSLVHKAREALGGL  129 (294)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT-CCEEECCCCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC-CcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4899999999999999999999999999998732  3344444444443 568999999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||.....                  ..+.+.+.++|++.|++|+.|+++++++++|.|++  .|+||++||..+
T Consensus       130 D~lv~nAg~~~~~------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~  189 (294)
T 3r3s_A          130 DILALVAGKQTAI------------------PEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQA  189 (294)
T ss_dssp             CEEEECCCCCCCC------------------SSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGG
T ss_pred             CEEEECCCCcCCC------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhh
Confidence            9999999985321                  13456688999999999999999999999999965  389999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       190 ~~~~~~~~~Y~asKa  204 (294)
T 3r3s_A          190 YQPSPHLLDYAATKA  204 (294)
T ss_dssp             TSCCTTCHHHHHHHH
T ss_pred             ccCCCCchHHHHHHH
Confidence            999999999999985

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.97  E-value=7.8e-31  Score=195.03  Aligned_cols=151  Identities=25%  Similarity=0.258  Sum_probs=133.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.++++++|+
T Consensus        11 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A           11 VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----GDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4899999999999999999999999999999988777766655    245899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC----CCeEEEEecC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD----LPRIVNVSSN  156 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~----~g~iv~isS~  156 (174)
                      +|||||.....                  ....+.+.+++++.+++|+.++++++++++|.|++++    .++||++||.
T Consensus        87 li~~Ag~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~  148 (261)
T 3n74_A           87 LVNNAGIGHKP------------------QNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVAST  148 (261)
T ss_dssp             EEECCCCCCCS------------------CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCT
T ss_pred             EEECCccCCCC------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCch
Confidence            99999985421                  1234557889999999999999999999999998763    5789999999


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      .+..+.++...|+++|+
T Consensus       149 ~~~~~~~~~~~Y~asKa  165 (261)
T 3n74_A          149 GAGRPRPNLAWYNATKG  165 (261)
T ss_dssp             TTTSCCTTCHHHHHHHH
T ss_pred             hhcCCCCCccHHHHHHH
Confidence            99999999999999985

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.97  E-value=2.7e-31  Score=198.55  Aligned_cols=153  Identities=24%  Similarity=0.251  Sum_probs=133.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|+++++ +.+...+..+++...+ .++.++.+|++|.++++++++++.+++|++|
T Consensus        27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id  105 (269)
T 3gk3_A           27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAG-RDFKAYAVDVADFESCERCAEKVLADFGKVD  105 (269)
T ss_dssp             EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTT-CCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999999985 4444445555554433 4699999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+....                   .+.+.+.+++++.+++|+.+++++++.++|.|++++.|+||++||..+.
T Consensus       106 ~li~nAg~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  166 (269)
T 3gk3_A          106 VLINNAGITRDA-------------------TFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGS  166 (269)
T ss_dssp             EEEECCCCCCCB-------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             EEEECCCcCCCc-------------------chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhc
Confidence            999999985432                   2345678889999999999999999999999988888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       167 ~~~~~~~~Y~asKa  180 (269)
T 3gk3_A          167 RGAFGQANYASAKA  180 (269)
T ss_dssp             HCCTTBHHHHHHHH
T ss_pred             cCCCCcchHHHHHH
Confidence            99999999999985

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.97  E-value=4.2e-31  Score=198.51  Aligned_cols=150  Identities=27%  Similarity=0.284  Sum_probs=133.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+...+..+++    +.++.++.+|++|.++++++++++.++++++|+
T Consensus         7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----PDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC----TTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4899999999999999999999999999999987766655443    346999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                   +..+.+.+++++.+++|+.|+++++++++|.|++++.|+||++||..+..
T Consensus        83 lv~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  143 (281)
T 3m1a_A           83 LVNNAGRTQVG-------------------AFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL  143 (281)
T ss_dssp             EEECCCCEEEC-------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC
T ss_pred             EEECCCcCCCC-------------------ChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC
Confidence            99999985432                   23456788899999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       144 ~~~~~~~Y~~sK~  156 (281)
T 3m1a_A          144 SFAGFSAYSATKA  156 (281)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCchHHHHHHH
Confidence            9999999999985

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.97  E-value=9.8e-31  Score=200.72  Aligned_cols=165  Identities=19%  Similarity=0.132  Sum_probs=134.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEe-eChhHHHHHHHHHhhcCCCceeEEEeecCChh-----------------
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTA-RDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA-----------------   62 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~-----------------   62 (174)
                      ++|||||++|||+++|++|+++|++|++++ |+.+..++..+++....+.++.++.+|++|++                 
T Consensus        48 ~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~  127 (328)
T 2qhx_A           48 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT  127 (328)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHH
Confidence            489999999999999999999999999999 98877777777776333456999999999999                 


Q ss_pred             hHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCC---cccccccccCHHHHHHhhHhhhhhHHHHHHhhh
Q 035504           63 TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEP---IKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLI  139 (174)
Q Consensus        63 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  139 (174)
                      +++++++++.+.+|++|+||||||+....+        +.+.++   +.+....+...+++++.|++|+.++++++++++
T Consensus       128 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~--------~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  199 (328)
T 2qhx_A          128 RCAELVAACYTHWGRCDVLVNNASSFYPTP--------LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  199 (328)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCC--------SCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCC--------hhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999854321        111110   001111122378899999999999999999999


Q ss_pred             hhccCCC------CCeEEEEecCCCcccCCCCcceeeecc
Q 035504          140 PLLQLSD------LPRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       140 ~~m~~~~------~g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      |.|++++      .|+||++||..+..+.++...|+++|+
T Consensus       200 ~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKa  239 (328)
T 2qhx_A          200 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG  239 (328)
T ss_dssp             HHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHH
T ss_pred             HHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHH
Confidence            9998776      799999999999999999999999985

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.97  E-value=2.7e-31  Score=198.16  Aligned_cols=154  Identities=23%  Similarity=0.234  Sum_probs=134.4

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHH-HHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRG-LEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++|||||+  +|||+++|++|+++|++|++++|+.... ++..+++.+..+.++.++.+|++|+++++++++++.+++++
T Consensus        22 ~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  101 (267)
T 3gdg_A           22 VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQ  101 (267)
T ss_dssp             EEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSC
T ss_pred             EEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            48999999  9999999999999999999999876544 56667776554567999999999999999999999999999


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|+||||||+....                   .+.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..
T Consensus       102 id~li~nAg~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  162 (267)
T 3gdg_A          102 IDAFIANAGATADS-------------------GILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMS  162 (267)
T ss_dssp             CSEEEECCCCCCCS-------------------CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             CCEEEECCCcCCCC-------------------CcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcccc
Confidence            99999999985432                   23456788999999999999999999999999988889999999999


Q ss_pred             CcccC--CCCcceeeecc
Q 035504          158 GKLKN--TWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~--~~~~~y~~~k~  173 (174)
                      +..+.  ++...|+.+|+
T Consensus       163 ~~~~~~~~~~~~Y~~sK~  180 (267)
T 3gdg_A          163 GHIANFPQEQTSYNVAKA  180 (267)
T ss_dssp             GTSCCSSSCCHHHHHHHH
T ss_pred             ccccCCCCCCCcchHHHH
Confidence            98865  57788999885

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=8.1e-31  Score=196.66  Aligned_cols=153  Identities=25%  Similarity=0.238  Sum_probs=128.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc--CCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS--GFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...  .+.++.++.+|++|+++++++++++.+++|++
T Consensus         8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (278)
T 1spx_A            8 VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKL   87 (278)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCC
Confidence            4899999999999999999999999999999987777777666321  22358899999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCccccccccc----CHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEe
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTP----TYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVS  154 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~is  154 (174)
                      |+||||||.....                   +..+.    +.+++++.+++|+.++++++++++|.|++++ |+||++|
T Consensus        88 d~lv~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~is  147 (278)
T 1spx_A           88 DILVNNAGAAIPD-------------------SQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNIS  147 (278)
T ss_dssp             CEEEECCC--------------------------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC
T ss_pred             CEEEECCCCCCCc-------------------ccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEe
Confidence            9999999985321                   11223    7788999999999999999999999998766 9999999


Q ss_pred             cCCC-cccCCCCcceeeecc
Q 035504          155 SNMG-KLKNTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~-~~~~~~~~~y~~~k~  173 (174)
                      |..+ ..+.++...|+.+|+
T Consensus       148 S~~~~~~~~~~~~~Y~~sK~  167 (278)
T 1spx_A          148 SIASGLHATPDFPYYSIAKA  167 (278)
T ss_dssp             CTTSSSSCCTTSHHHHHHHH
T ss_pred             cccccccCCCCccHHHHHHH
Confidence            9999 888888899999985

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.97  E-value=7.3e-31  Score=195.47  Aligned_cols=156  Identities=20%  Similarity=0.336  Sum_probs=130.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+...+...+.....+.++.++.+|++|+++++++++++.++++++|+
T Consensus         9 ~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   88 (264)
T 3i4f_A            9 HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDF   88 (264)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999887665444444443333356999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC-CC-
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN-MG-  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~-~~-  158 (174)
                      ||||||+....                 .....+.+.+++++.+++|+.++++++++++|.|++++.|+||++||. .+ 
T Consensus        89 lv~~Ag~~~~~-----------------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  151 (264)
T 3i4f_A           89 LINNAGPYVFE-----------------RKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADS  151 (264)
T ss_dssp             EECCCCCCCCS-----------------CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGG
T ss_pred             EEECCcccccC-----------------CCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcc
Confidence            99999953211                 123456688899999999999999999999999998888999999998 44 


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       152 ~~~~~~~~~Y~asKa  166 (264)
T 3i4f_A          152 APGWIYRSAFAAAKV  166 (264)
T ss_dssp             CCCCTTCHHHHHHHH
T ss_pred             cCCCCCCchhHHHHH
Confidence            456677889999885

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=1.1e-30  Score=194.81  Aligned_cols=147  Identities=25%  Similarity=0.217  Sum_probs=126.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++.    .++.++.+|++|+++++++++++.+++|++|+
T Consensus         8 ~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            8 TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----AEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC----SSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            48999999999999999999999999999999776666555442    35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+....                   +..+.+.+++++.+++|+.++++++++++|.| ++ .|+||++||..+. 
T Consensus        84 lvnnAg~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-  141 (263)
T 2a4k_A           84 VAHFAGVAHSA-------------------LSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-  141 (263)
T ss_dssp             EEEGGGGTTTT-------------------C----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-
Confidence            99999985321                   23456788899999999999999999999999 55 6999999999998 


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       142 ~~~~~~~Y~asK~  154 (263)
T 2a4k_A          142 GAFGLAHYAAGKL  154 (263)
T ss_dssp             CHHHHHHHHHCSS
T ss_pred             CCCCcHHHHHHHH
Confidence            8788899999986

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.97  E-value=1.4e-30  Score=194.03  Aligned_cols=150  Identities=23%  Similarity=0.230  Sum_probs=131.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++..    ++.++.+|++|+++++++++++.+++|++|+
T Consensus        14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           14 KAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN----GGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT----CCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc----CCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            489999999999999999999999999999997766555544432    5788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      ||||||....                   .+..+.+.+++++.+++|+.++++++++++|.|.+++ .|+||++||..+.
T Consensus        90 lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  150 (263)
T 3ak4_A           90 LCANAGVSTM-------------------RPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAK  150 (263)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT
T ss_pred             EEECCCcCCC-------------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc
Confidence            9999997532                   1234567888999999999999999999999998776 6999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+.+|+
T Consensus       151 ~~~~~~~~Y~~sK~  164 (263)
T 3ak4_A          151 VGAPLLAHYSASKF  164 (263)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             cCCCCchhHHHHHH
Confidence            98888899999885

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.97  E-value=4.9e-31  Score=197.27  Aligned_cols=143  Identities=26%  Similarity=0.339  Sum_probs=126.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..           ......+++|++|+++++++++++.+++|++|+
T Consensus        16 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           16 VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----------TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----------cCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            589999999999999999999999999999986532           124678899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+...                   .+..+.+.++|+++|++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        85 lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  145 (269)
T 3vtz_A           85 LVNNAGIEQY-------------------SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA  145 (269)
T ss_dssp             EEECCCCCCC-------------------CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEECCCcCCC-------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc
Confidence            9999998542                   124456788999999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       146 ~~~~~~~Y~asKa  158 (269)
T 3vtz_A          146 ATKNAAAYVTSKH  158 (269)
T ss_dssp             BCTTCHHHHHHHH
T ss_pred             CCCCChhHHHHHH
Confidence            9999999999985

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.97  E-value=1.6e-30  Score=192.03  Aligned_cols=157  Identities=27%  Similarity=0.267  Sum_probs=135.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++....+.++.++.+|++|+++++++++++.++++++|+
T Consensus         4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (250)
T 2cfc_A            4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDV   83 (250)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999999877777666662222346899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....+                ...+.+.+.+++++.+++|+.+++++++.++|.|++++.++||++||..+..
T Consensus        84 li~~Ag~~~~~~----------------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  147 (250)
T 2cfc_A           84 LVNNAGITGNSE----------------AGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV  147 (250)
T ss_dssp             EEECCCCCCCTT----------------CCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCCCC----------------cchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc
Confidence            999999853211                0113456788899999999999999999999999887779999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       148 ~~~~~~~Y~~sK~  160 (250)
T 2cfc_A          148 AFPGRSAYTTSKG  160 (250)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCchhHHHHHH
Confidence            8888999999885

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.97  E-value=2.2e-30  Score=190.71  Aligned_cols=153  Identities=22%  Similarity=0.287  Sum_probs=135.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-------eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-------IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      ++|||||++|||++++++|+++|+       +|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+
T Consensus         4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~   82 (244)
T 2bd0_A            4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTITADISDMADVRRLTTHIVE   82 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-CEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC-CeeeEEEecCCCHHHHHHHHHHHHH
Confidence            489999999999999999999999       99999999877777777776543 4589999999999999999999999


Q ss_pred             hcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEE
Q 035504           74 QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNV  153 (174)
Q Consensus        74 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~i  153 (174)
                      +++++|+||||||....                   .++.+.+.+++++.+++|+.+++++++.++|+|++++.|+||++
T Consensus        83 ~~g~id~li~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i  143 (244)
T 2bd0_A           83 RYGHIDCLVNNAGVGRF-------------------GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFI  143 (244)
T ss_dssp             HTSCCSEEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             hCCCCCEEEEcCCcCCc-------------------CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            99999999999998532                   12345577889999999999999999999999988777999999


Q ss_pred             ecCCCcccCCCCcceeeecc
Q 035504          154 SSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       154 sS~~~~~~~~~~~~y~~~k~  173 (174)
                      ||..+..+.++...|+.+|+
T Consensus       144 sS~~~~~~~~~~~~Y~~sK~  163 (244)
T 2bd0_A          144 TSVAATKAFRHSSIYCMSKF  163 (244)
T ss_dssp             CCGGGTSCCTTCHHHHHHHH
T ss_pred             ecchhcCCCCCCchhHHHHH
Confidence            99999998888999999985

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.97  E-value=2.3e-30  Score=193.08  Aligned_cols=142  Identities=23%  Similarity=0.306  Sum_probs=127.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+.            +.++.++.+|++|+++++++++++.+++|++|+
T Consensus        10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   77 (264)
T 2dtx_A           10 VVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV   77 (264)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998653            235888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||....                   .++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        78 lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  138 (264)
T 2dtx_A           78 LVNNAGIESY-------------------GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI  138 (264)
T ss_dssp             EEECCCCCCC-------------------BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS
T ss_pred             EEECCCCCCC-------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc
Confidence            9999998532                   123456788899999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       139 ~~~~~~~Y~~sK~  151 (264)
T 2dtx_A          139 ITKNASAYVTSKH  151 (264)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCchhHHHHHH
Confidence            9899999999985

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.97  E-value=2.8e-31  Score=203.20  Aligned_cols=153  Identities=25%  Similarity=0.262  Sum_probs=134.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC----------hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD----------EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADF   70 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~   70 (174)
                      ++|||||++|||+++|++|+++|++|++++|+          .+..++..+++...+ .++.++.+|++|++++++++++
T Consensus        29 ~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~  107 (322)
T 3qlj_A           29 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG-GEAVADGSNVADWDQAAGLIQT  107 (322)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT-CEEEEECCCTTSHHHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHH
Confidence            48999999999999999999999999999987          556677777777665 4589999999999999999999


Q ss_pred             HHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC----
Q 035504           71 VRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD----  146 (174)
Q Consensus        71 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~----  146 (174)
                      +.+++|++|+||||||+...                   ..+.+.+.++|++.+++|+.++++++++++|+|++.+    
T Consensus       108 ~~~~~g~iD~lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~  168 (322)
T 3qlj_A          108 AVETFGGLDVLVNNAGIVRD-------------------RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGK  168 (322)
T ss_dssp             HHHHHSCCCEEECCCCCCCC-------------------CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHcCCCCEEEECCCCCCC-------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCC
Confidence            99999999999999998543                   1345668899999999999999999999999987532    


Q ss_pred             --CCeEEEEecCCCcccCCCCcceeeecc
Q 035504          147 --LPRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       147 --~g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                        .|+||++||..+..+.++...|+++|+
T Consensus       169 ~~~g~IV~isS~~~~~~~~~~~~Y~asKa  197 (322)
T 3qlj_A          169 AVDGRIINTSSGAGLQGSVGQGNYSAAKA  197 (322)
T ss_dssp             CCCEEEEEECCHHHHHCBTTCHHHHHHHH
T ss_pred             CCCcEEEEEcCHHHccCCCCCccHHHHHH
Confidence              379999999999999999999999985

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.97  E-value=7.2e-30  Score=190.34  Aligned_cols=155  Identities=17%  Similarity=0.151  Sum_probs=131.5

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhh-cCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKH-SGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++|||||+  +|||+++|++|+++|++|++++|+... .+..+++.+ .+..++.++.+|++|+++++++++++.+++++
T Consensus         9 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (266)
T 3oig_A            9 NIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL-EKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGV   87 (266)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSC
T ss_pred             EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH-HHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            48999999  779999999999999999999998543 334444433 33336999999999999999999999999999


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|++|||||.....               ..+....+.+.+++++.+++|+.++++++++++|.|++  .|+||++||..
T Consensus        88 id~li~~Ag~~~~~---------------~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~  150 (266)
T 3oig_A           88 IHGIAHCIAFANKE---------------ELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLG  150 (266)
T ss_dssp             CCEEEECCCCCCGG---------------GGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGG
T ss_pred             eeEEEEcccccccc---------------ccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEeccc
Confidence            99999999985421               11234566788999999999999999999999999974  48999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.|+...|+++|+
T Consensus       151 ~~~~~~~~~~Y~asKa  166 (266)
T 3oig_A          151 GELVMPNYNVMGVAKA  166 (266)
T ss_dssp             GTSCCTTTHHHHHHHH
T ss_pred             ccccCCCcchhHHHHH
Confidence            9999999999999985

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=2.2e-30  Score=193.92  Aligned_cols=153  Identities=26%  Similarity=0.315  Sum_probs=134.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++++.+ .++.++.+|++|+++++++++++.+.++++|+
T Consensus        33 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  111 (272)
T 1yb1_A           33 IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI  111 (272)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC-CeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            48999999999999999999999999999999877777777776654 45899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                   +..+.+.+++++.+++|+.+++++++.++|.|++++.++||++||..+..
T Consensus       112 li~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~  172 (272)
T 1yb1_A          112 LVNNAGVVYTS-------------------DLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV  172 (272)
T ss_dssp             EEECCCCCCCC-------------------CCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC
T ss_pred             EEECCCcCCCc-------------------chhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC
Confidence            99999975321                   23445678899999999999999999999999888889999999999998


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|.
T Consensus       173 ~~~~~~~Y~~sK~  185 (272)
T 1yb1_A          173 SVPFLLAYCSSKF  185 (272)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CCCCchhHHHHHH
Confidence            8888889999885

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.97  E-value=4.8e-30  Score=189.53  Aligned_cols=152  Identities=27%  Similarity=0.287  Sum_probs=133.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...  .++.++.+|++|+++++++++++.++++++|+
T Consensus         8 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (251)
T 1zk4_A            8 VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc--CceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4899999999999999999999999999999987666666665432  35899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC-CeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL-PRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~iv~isS~~~~  159 (174)
                      +|||||.....                   +..+.+.+++++.+++|+.+++++++.++|.|++++. ++||++||..+.
T Consensus        86 li~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  146 (251)
T 1zk4_A           86 LVNNAGIAVNK-------------------SVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF  146 (251)
T ss_dssp             EEECCCCCCCC-------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhc
Confidence            99999975321                   2345577889999999999999999999999988876 899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       147 ~~~~~~~~Y~~sK~  160 (251)
T 1zk4_A          147 VGDPSLGAYNASKG  160 (251)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             cCCCCCccchHHHH
Confidence            98899999999885

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.97  E-value=1e-29  Score=192.54  Aligned_cols=154  Identities=16%  Similarity=0.153  Sum_probs=129.5

Q ss_pred             CEEEecCCC--chhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANK--GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++  |||+++|++|+++|++|++++|+.+..+. .+++....+ ++.++++|++|+++++++++++.+++|++
T Consensus        32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (296)
T 3k31_A           32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKR-VDPLAESLG-VKLTVPCDVSDAESVDNMFKVLAEEWGSL  109 (296)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHHT-CCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            489999986  99999999999999999999998654333 333333222 36889999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||+.....               ...++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+
T Consensus       110 D~lVnnAG~~~~~~---------------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~  172 (296)
T 3k31_A          110 DFVVHAVAFSDKNE---------------LKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGA  172 (296)
T ss_dssp             SEEEECCCCCCHHH---------------HTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGG
T ss_pred             CEEEECCCcCCccc---------------ccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhh
Confidence            99999999854210               0123456788999999999999999999999999976  589999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+++|+
T Consensus       173 ~~~~~~~~~Y~asKa  187 (296)
T 3k31_A          173 EKVVPHYNVMGVCKA  187 (296)
T ss_dssp             TSCCTTTTHHHHHHH
T ss_pred             ccCCCCchhhHHHHH
Confidence            999999999999985

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.97  E-value=7.3e-30  Score=186.90  Aligned_cols=149  Identities=31%  Similarity=0.275  Sum_probs=131.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++.     ++.++.+|++|.++++++++++.+.++++|+
T Consensus         7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A            7 AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-----GALPLPGDVREEGDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-----hceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998776655554442     4888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   .+..+.+.+++++.+++|+.+++++++.++|.|++++.++||++||..+..
T Consensus        82 li~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  142 (234)
T 2ehd_A           82 LVNNAGVGVM-------------------KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN  142 (234)
T ss_dssp             EEECCCCCCC-------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS
T ss_pred             EEECCCcCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC
Confidence            9999997432                   123456788899999999999999999999999988889999999999998


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       143 ~~~~~~~Y~~sK~  155 (234)
T 2ehd_A          143 PFKGGAAYNASKF  155 (234)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCchhhHHHH
Confidence            8888899999885

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.97  E-value=1e-29  Score=191.26  Aligned_cols=151  Identities=23%  Similarity=0.252  Sum_probs=129.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+. .++..+++...+ .++.++.+|++|+++++++++++.++++++|
T Consensus        31 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD  109 (283)
T 1g0o_A           31 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-SDAACVKANVGVVEDIVRMFEEAVKIFGKLD  109 (283)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC-CCeEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999999998654 344555665544 4588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+...                   ..+.+.+.+++++.+++|+.++++++++++|.|+  +.|+||++||..+.
T Consensus       110 ~lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~  168 (283)
T 1g0o_A          110 IVCSNSGVVSF-------------------GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSITGQ  168 (283)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTCEEEEECCGGGT
T ss_pred             EEEECCCcCCC-------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCCeEEEEechhhc
Confidence            99999998532                   1234567889999999999999999999999993  45899999999998


Q ss_pred             ccCCC-Ccceeeecc
Q 035504          160 LKNTW-QGAICYLTF  173 (174)
Q Consensus       160 ~~~~~-~~~y~~~k~  173 (174)
                      .+.+. ...|+++|+
T Consensus       169 ~~~~~~~~~Y~asK~  183 (283)
T 1g0o_A          169 AKAVPKHAVYSGSKG  183 (283)
T ss_dssp             CSSCSSCHHHHHHHH
T ss_pred             cCCCCCCcchHHHHH
Confidence            87664 789999985

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.97  E-value=2.1e-30  Score=191.09  Aligned_cols=154  Identities=23%  Similarity=0.226  Sum_probs=134.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++++|+++|++|++++|+.+..++..+++....+.++.++.+|++|+++++++++++.+.++++|+
T Consensus         9 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   88 (248)
T 2pnf_A            9 VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDI   88 (248)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            48999999999999999999999999999999877777666665532345889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   .+.+.+.+++++.+++|+.++++++++++|.|++++.++||++||..+..
T Consensus        89 vi~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  149 (248)
T 2pnf_A           89 LVNNAGITRDK-------------------LFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFT  149 (248)
T ss_dssp             EEECCCCCCCC-------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHH
T ss_pred             EEECCCCCCCC-------------------ccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcC
Confidence            99999975321                   23455778889999999999999999999999887779999999998888


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       150 ~~~~~~~Y~~sK~  162 (248)
T 2pnf_A          150 GNVGQVNYSTTKA  162 (248)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCchHHHHHH
Confidence            8888899998885

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.97  E-value=7.7e-30  Score=189.49  Aligned_cols=153  Identities=23%  Similarity=0.238  Sum_probs=133.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++| +.+..++..+++...+ .++.++.+|++|+++++++++++.++++++|
T Consensus         9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (261)
T 1gee_A            9 VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-GEAIAVKGDVTVESDVINLVQSAIKEFGKLD   87 (261)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999999999 7666666666676544 4588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~  158 (174)
                      +||||||.....                   +..+.+.+++++.+++|+.++++++++++|.|++++ .++||++||..+
T Consensus        88 ~li~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~  148 (261)
T 1gee_A           88 VMINNAGLENPV-------------------SSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE  148 (261)
T ss_dssp             EEEECCCCCCCC-------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGG
T ss_pred             EEEECCCCCCCC-------------------CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHh
Confidence            999999975321                   234557788999999999999999999999998876 799999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       149 ~~~~~~~~~Y~~sK~  163 (261)
T 1gee_A          149 KIPWPLFVHYAASKG  163 (261)
T ss_dssp             TSCCTTCHHHHHHHH
T ss_pred             cCCCCCccHHHHHHH
Confidence            998888999999984

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.97  E-value=3.4e-30  Score=192.78  Aligned_cols=154  Identities=29%  Similarity=0.283  Sum_probs=131.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEE-eeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++...+ .++.++.+|++|+++++++++++.++++++|
T Consensus        28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id  106 (272)
T 4e3z_A           28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG-GEAVAIPGDVGNAADIAAMFSAVDRQFGRLD  106 (272)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            48999999999999999999999999887 566666666666776654 4699999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC---CCCeEEEEecC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS---DLPRIVNVSSN  156 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~---~~g~iv~isS~  156 (174)
                      +||||||+....                  ..+.+.+.+++++.+++|+.+++++++.++|.|++.   +.|+||++||.
T Consensus       107 ~li~nAg~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~  168 (272)
T 4e3z_A          107 GLVNNAGIVDYP------------------QRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSM  168 (272)
T ss_dssp             EEEECCCCCCCC------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCT
T ss_pred             EEEECCCCCCCC------------------CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcch
Confidence            999999985431                  124556888999999999999999999999999873   45899999999


Q ss_pred             CCcccCC-CCcceeeecc
Q 035504          157 MGKLKNT-WQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~-~~~~y~~~k~  173 (174)
                      .+..+.+ ....|+.+|+
T Consensus       169 ~~~~~~~~~~~~Y~asKa  186 (272)
T 4e3z_A          169 AAILGSATQYVDYAASKA  186 (272)
T ss_dssp             HHHHCCTTTCHHHHHHHH
T ss_pred             HhccCCCCCcchhHHHHH
Confidence            9988766 5677999885

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.97  E-value=1.1e-29  Score=192.06  Aligned_cols=154  Identities=14%  Similarity=0.132  Sum_probs=130.0

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+  +|||+++|++|+++|++|++++|+.. ..+..+++.+..+ ++.++.+|++|+++++++++++.+++|++
T Consensus        33 ~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  110 (293)
T 3grk_A           33 RGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA-LKKRVEPLAEELG-AFVAGHCDVADAASIDAVFETLEKKWGKL  110 (293)
T ss_dssp             EEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH-HHHHHHHHHHHHT-CEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC-CceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            48999999  56999999999999999999999854 3344444444333 48899999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||+.....               ....+.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+
T Consensus       111 D~lVnnAG~~~~~~---------------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~  173 (293)
T 3grk_A          111 DFLVHAIGFSDKDE---------------LTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGA  173 (293)
T ss_dssp             SEEEECCCCCCHHH---------------HTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGG
T ss_pred             CEEEECCccCCccc---------------ccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhh
Confidence            99999999854210               0123456688999999999999999999999999975  589999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+++|+
T Consensus       174 ~~~~~~~~~Y~asKa  188 (293)
T 3grk_A          174 EKVMPNYNVMGVAKA  188 (293)
T ss_dssp             TSBCTTTTHHHHHHH
T ss_pred             ccCCCchHHHHHHHH
Confidence            999999999999985

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=2.3e-30  Score=193.73  Aligned_cols=149  Identities=26%  Similarity=0.355  Sum_probs=129.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++.     ++.++.+|++|+++++++++++.+++|++|+
T Consensus        11 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A           11 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-----GAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-----TEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999776655554442     3788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                  .++.+.+.++|++.+++|+.++++++++++|+|+++ .|+||++||..+..
T Consensus        86 lv~nAg~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~  146 (270)
T 1yde_A           86 VVNNAGHHPPP------------------QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAI  146 (270)
T ss_dssp             EEECCCCCCCC------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHH
T ss_pred             EEECCCCCCCC------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccC
Confidence            99999975321                  123456788899999999999999999999999765 49999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       147 ~~~~~~~Y~asKa  159 (270)
T 1yde_A          147 GQAQAVPYVATKG  159 (270)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCcccHHHHH
Confidence            8888999999985

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.97  E-value=2.7e-30  Score=190.12  Aligned_cols=153  Identities=24%  Similarity=0.303  Sum_probs=133.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEE-eeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|+++ +|+.+..++..+++...+ .++.++.+|++|+++++++++++.++++++|
T Consensus         3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-GQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT-CEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999985 788776666666666554 3588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....                   ...+.+.+++++.+++|+.++++++++++|.|++++.++||++||..+.
T Consensus        82 ~li~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  142 (244)
T 1edo_A           82 VVVNNAGITRDT-------------------LLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL  142 (244)
T ss_dssp             EEEECCCCCCCC-------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred             EEEECCCCCCCc-------------------CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhc
Confidence            999999985321                   2345577889999999999999999999999988777999999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       143 ~~~~~~~~Y~~sK~  156 (244)
T 1edo_A          143 IGNIGQANYAAAKA  156 (244)
T ss_dssp             HCCTTCHHHHHHHH
T ss_pred             CCCCCCccchhhHH
Confidence            88888999999885

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.97  E-value=1.9e-29  Score=189.96  Aligned_cols=155  Identities=18%  Similarity=0.200  Sum_probs=131.5

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+  +|||++++++|+++|++|++++|+.+ ..+..+++....+. +.++.+|++|+++++++++++.+++|++
T Consensus        23 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~-~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  100 (285)
T 2p91_A           23 RALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGS-DLVVKCDVSLDEDIKNLKKFLEENWGSL  100 (285)
T ss_dssp             EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC-CCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCC-eEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            48999999  99999999999999999999999874 45555666554433 7889999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||+.....               ...++.+.+.+++++.+++|+.|+++++++++|.|+++ .|+||++||..+
T Consensus       101 D~lv~~Ag~~~~~~---------------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~  164 (285)
T 2p91_A          101 DIIVHSIAYAPKEE---------------FKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGA  164 (285)
T ss_dssp             CEEEECCCCCCGGG---------------GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGG
T ss_pred             CEEEECCCCCCccc---------------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchh
Confidence            99999999853210               00123456788999999999999999999999999865 499999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+++|+
T Consensus       165 ~~~~~~~~~Y~~sK~  179 (285)
T 2p91_A          165 EKVVPHYNVMGIAKA  179 (285)
T ss_dssp             TSBCTTTTHHHHHHH
T ss_pred             ccCCCCccHHHHHHH
Confidence            998899999999985

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.97  E-value=9e-30  Score=188.94  Aligned_cols=154  Identities=28%  Similarity=0.283  Sum_probs=133.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+...+..++++..+ .++.++.+|++|+++++++++++.++++++|+
T Consensus        15 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   93 (260)
T 3awd_A           15 VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG-HDVSSVVMDVTNTESVQNAVRSVHEQEGRVDI   93 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999877777777776554 35899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||...+.                  .+..+.+.+++++.+++|+.++++++++++|.|++++.++||++||..+..
T Consensus        94 vi~~Ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  155 (260)
T 3awd_A           94 LVACAGICISE------------------VKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLI  155 (260)
T ss_dssp             EEECCCCCCCS------------------CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCCC------------------CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcc
Confidence            99999975411                  123455778889999999999999999999999887779999999999988


Q ss_pred             cCCCC--cceeeecc
Q 035504          161 KNTWQ--GAICYLTF  173 (174)
Q Consensus       161 ~~~~~--~~y~~~k~  173 (174)
                      +.+..  ..|+.+|+
T Consensus       156 ~~~~~~~~~Y~~sK~  170 (260)
T 3awd_A          156 VNRPQQQAAYNASKA  170 (260)
T ss_dssp             CCSSSCCHHHHHHHH
T ss_pred             cCCCCCccccHHHHH
Confidence            77776  88998885

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.97  E-value=6.5e-30  Score=190.46  Aligned_cols=153  Identities=27%  Similarity=0.267  Sum_probs=124.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc-CCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF-GKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+.+ +++|
T Consensus        16 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   94 (266)
T 1xq1_A           16 TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG-FQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   94 (266)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            48999999999999999999999999999999877777777776654 358899999999999999999999999 8999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||.....                   +..+.+.+++++.+++|+.++++++++++|.|++++.++||++||..+.
T Consensus        95 ~li~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~  155 (266)
T 1xq1_A           95 ILINNLGAIRSK-------------------PTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV  155 (266)
T ss_dssp             EEEEECCC-------------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----
T ss_pred             EEEECCCCCCCC-------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence            999999975321                   2345577889999999999999999999999988778999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+.+|+
T Consensus       156 ~~~~~~~~Y~~sK~  169 (266)
T 1xq1_A          156 VSASVGSIYSATKG  169 (266)
T ss_dssp             -----CCHHHHHHH
T ss_pred             cCCCCCchHHHHHH
Confidence            88888899999885

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.97  E-value=3e-30  Score=194.20  Aligned_cols=149  Identities=21%  Similarity=0.291  Sum_probs=127.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC------------hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD------------EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLA   68 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~   68 (174)
                      ++|||||++|||+++|++|+++|++|++++|+            .+..++...++...+ .++.++.+|++|++++++++
T Consensus        12 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~   90 (287)
T 3pxx_A           12 VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-RKAYTAEVDVRDRAAVSREL   90 (287)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-SCEEEEECCTTCHHHHHHHH
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHH
Confidence            48999999999999999999999999999987            455555556665554 46999999999999999999


Q ss_pred             HHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCC
Q 035504           69 DFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP  148 (174)
Q Consensus        69 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g  148 (174)
                      +++.+++|++|+||||||+....                     .+.+.++|++.|++|+.++++++++++|+|.  +.|
T Consensus        91 ~~~~~~~g~id~lv~nAg~~~~~---------------------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g  147 (287)
T 3pxx_A           91 ANAVAEFGKLDVVVANAGICPLG---------------------AHLPVQAFADAFDVDFVGVINTVHAALPYLT--SGA  147 (287)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCC---------------------TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC--TTC
T ss_pred             HHHHHHcCCCCEEEECCCcCccc---------------------CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh--cCc
Confidence            99999999999999999985321                     1246788899999999999999999999993  348


Q ss_pred             eEEEEecCCCcccC-----------CCCcceeeecc
Q 035504          149 RIVNVSSNMGKLKN-----------TWQGAICYLTF  173 (174)
Q Consensus       149 ~iv~isS~~~~~~~-----------~~~~~y~~~k~  173 (174)
                      +||++||..+..+.           ++...|+++|+
T Consensus       148 ~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~  183 (287)
T 3pxx_A          148 SIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQ  183 (287)
T ss_dssp             EEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHH
T ss_pred             EEEEeccchhcccccccccccccCCCccchHHHHHH
Confidence            99999999988765           66778998885

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.97  E-value=4.2e-30  Score=191.84  Aligned_cols=153  Identities=24%  Similarity=0.212  Sum_probs=133.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEe-eChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTA-RDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|+++. |+.+..++..+++.+.++ ++.++.+|++|+++++++++++.++++++|
T Consensus        28 ~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  106 (267)
T 4iiu_A           28 SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGG-NGRLLSFDVANREQCREVLEHEIAQHGAWY  106 (267)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            489999999999999999999999997654 566666777777776654 599999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhcc-CCCCCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQ-LSDLPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~-~~~~g~iv~isS~~~  158 (174)
                      ++|||||.....                   .+.+.+.+++++.+++|+.+++++++.++|.|. +++.|+||++||..+
T Consensus       107 ~li~nAg~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  167 (267)
T 4iiu_A          107 GVVSNAGIARDA-------------------AFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSG  167 (267)
T ss_dssp             EEEECCCCCCCC-------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHH
T ss_pred             EEEECCCCCCCC-------------------ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHh
Confidence            999999985431                   234567889999999999999999999998875 566799999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       168 ~~~~~~~~~Y~asKa  182 (267)
T 4iiu_A          168 VMGNRGQVNYSAAKA  182 (267)
T ss_dssp             HHCCTTCHHHHHHHH
T ss_pred             ccCCCCCchhHHHHH
Confidence            999999999999985

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.96  E-value=1.6e-30  Score=193.07  Aligned_cols=150  Identities=25%  Similarity=0.201  Sum_probs=125.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.++.   .+++    +.++.++.+|++|+++++++++.+.+ ++++|+
T Consensus        11 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~id~   82 (257)
T 3tl3_A           11 VAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL----GDRARFAAADVTDEAAVASALDLAET-MGTLRI   82 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT----CTTEEEEECCTTCHHHHHHHHHHHHH-HSCEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc----CCceEEEECCCCCHHHHHHHHHHHHH-hCCCCE
Confidence            489999999999999999999999999999965432   2222    34689999999999999999998877 999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccC--------CCCCeEEE
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQL--------SDLPRIVN  152 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~--------~~~g~iv~  152 (174)
                      +|||||+.....               ...+..+.+.++|++.+++|+.++++++++++|.|++        ++.|+||+
T Consensus        83 lv~nAg~~~~~~---------------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~  147 (257)
T 3tl3_A           83 VVNCAGTGNAIR---------------VLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIIN  147 (257)
T ss_dssp             EEECGGGSHHHH---------------HHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEE
T ss_pred             EEECCCCCCCcc---------------cccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEE
Confidence            999999854321               0112234688999999999999999999999999988        56789999


Q ss_pred             EecCCCcccCCCCcceeeecc
Q 035504          153 VSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       153 isS~~~~~~~~~~~~y~~~k~  173 (174)
                      +||..+..+.++...|+.+|+
T Consensus       148 isS~~~~~~~~~~~~Y~asKa  168 (257)
T 3tl3_A          148 TASVAAFDGQIGQAAYSASKG  168 (257)
T ss_dssp             ECCCC--CCHHHHHHHHHHHH
T ss_pred             EcchhhcCCCCCCccHHHHHH
Confidence            999999999888999999985

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.96  E-value=1.2e-29  Score=191.19  Aligned_cols=152  Identities=26%  Similarity=0.303  Sum_probs=133.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++.+.+..++.++.+|++|.++++++++++.+.+|++|+
T Consensus        30 ~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~  109 (286)
T 1xu9_A           30 KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDM  109 (286)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999887777777777666556899999999999999999999999999999


Q ss_pred             EEec-ccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNN-AAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~-ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||| +|....                    ...+.+.+++++.+++|+.|+++++++++|.|+++. |+||++||..+.
T Consensus       110 li~naag~~~~--------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~  168 (286)
T 1xu9_A          110 LILNHITNTSL--------------------NLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGK  168 (286)
T ss_dssp             EEECCCCCCCC--------------------CCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGT
T ss_pred             EEECCccCCCC--------------------ccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCC-CEEEEECCcccc
Confidence            9999 565321                    122346788999999999999999999999997654 899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       169 ~~~~~~~~Y~asK~  182 (286)
T 1xu9_A          169 VAYPMVAAYSASKF  182 (286)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             cCCCCccHHHHHHH
Confidence            99999999999985

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.96  E-value=5.9e-30  Score=192.73  Aligned_cols=153  Identities=27%  Similarity=0.250  Sum_probs=134.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+.++++|+
T Consensus        46 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~  124 (285)
T 2c07_A           46 VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-YESSGYAGDVSKKEEISEVINKILTEHKNVDI  124 (285)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC-CceeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            48999999999999999999999999999988777777777776544 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                   .+.+.+.+++++.+++|+.+++++++.++|.|++++.++||++||..+..
T Consensus       125 li~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~  185 (285)
T 2c07_A          125 LVNNAGITRDN-------------------LFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT  185 (285)
T ss_dssp             EEECCCCCCCC-------------------CTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH
T ss_pred             EEECCCCCCCC-------------------chhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc
Confidence            99999985321                   23455778899999999999999999999999877779999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|.
T Consensus       186 ~~~~~~~Y~asK~  198 (285)
T 2c07_A          186 GNVGQANYSSSKA  198 (285)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCchHHHHHH
Confidence            8889999999885

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.96  E-value=1.8e-30  Score=212.92  Aligned_cols=150  Identities=21%  Similarity=0.224  Sum_probs=128.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh---------hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE---------KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      ++|||||++|||+++|++|+++|++|++++++.         +.+++..+++.+.++. .   .+|++|.++++++++++
T Consensus        10 valVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~---~~d~~d~~~~~~~v~~~   85 (604)
T 2et6_A           10 VVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-A---VADYNNVLDGDKIVETA   85 (604)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-E---EEECCCTTCHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-E---EEEcCCHHHHHHHHHHH
Confidence            489999999999999999999999999998754         4456666777665432 2   36999999999999999


Q ss_pred             HhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEE
Q 035504           72 RSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIV  151 (174)
Q Consensus        72 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv  151 (174)
                      .++||+||+||||||+...                   .++.+++.++|+++|++|+.|+++++|+++|+|++++.|+||
T Consensus        86 ~~~~G~iDiLVnNAGi~~~-------------------~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IV  146 (604)
T 2et6_A           86 VKNFGTVHVIINNAGILRD-------------------ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIV  146 (604)
T ss_dssp             HHHHSCCCEEEECCCCCCC-------------------BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             HHHcCCCCEEEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEE
Confidence            9999999999999998532                   124566888999999999999999999999999988889999


Q ss_pred             EEecCCCcccCCCCcceeeecc
Q 035504          152 NVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       152 ~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      ++||.++..+.+++..|+++|+
T Consensus       147 nisS~ag~~~~~~~~~Y~asKa  168 (604)
T 2et6_A          147 NTSSPAGLYGNFGQANYASAKS  168 (604)
T ss_dssp             EECCHHHHHCCTTBHHHHHHHH
T ss_pred             EECCHHHcCCCCCchHHHHHHH
Confidence            9999999999999999999985

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.96  E-value=5.2e-30  Score=188.61  Aligned_cols=153  Identities=25%  Similarity=0.320  Sum_probs=133.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEE-eeChhHHHHHHHHHhhcCCCceeE-EEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIF-HQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~-~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||++++++|+++|++|+++ +|+.+..++..+++...+. ++.. +.+|++|.++++++++++.++++++
T Consensus         3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGS-PLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTC-SCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            48999999999999999999999999998 7887777777677766543 4666 8999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||....                   .++.+.+.+++++.+++|+.+++++++.++|.|++++.++||++||..+
T Consensus        82 d~li~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~  142 (245)
T 2ph3_A           82 DTLVNNAGITRD-------------------TLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVG  142 (245)
T ss_dssp             CEEEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             CEEEECCCCCCC-------------------CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhh
Confidence            999999997532                   1234557788999999999999999999999998877799999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       143 ~~~~~~~~~Y~~sK~  157 (245)
T 2ph3_A          143 ILGNPGQANYVASKA  157 (245)
T ss_dssp             HHCCSSBHHHHHHHH
T ss_pred             ccCCCCCcchHHHHH
Confidence            888888899999885

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.96  E-value=1.3e-29  Score=187.55  Aligned_cols=152  Identities=24%  Similarity=0.316  Sum_probs=134.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.++++++|+
T Consensus        13 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   91 (255)
T 1fmc_A           13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-GQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             EEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            48999999999999999999999999999999877777777776654 35889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                   .. +.+.+++++.+++|+.++++++++++|.|++++.++||++||..+..
T Consensus        92 vi~~Ag~~~~~-------------------~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  151 (255)
T 1fmc_A           92 LVNNAGGGGPK-------------------PF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN  151 (255)
T ss_dssp             EEECCCCCCCC-------------------CT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC
T ss_pred             EEECCCCCCCC-------------------CC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC
Confidence            99999975321                   11 45678899999999999999999999999887779999999999998


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       152 ~~~~~~~Y~~sK~  164 (255)
T 1fmc_A          152 KNINMTSYASSKA  164 (255)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCcccHHHHH
Confidence            8888899999885

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.96  E-value=2.1e-29  Score=188.67  Aligned_cols=154  Identities=20%  Similarity=0.281  Sum_probs=132.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+...+..+++...  .++.++.+|++|+++++++++++.++++++|+
T Consensus        18 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   95 (278)
T 2bgk_A           18 VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP--DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   95 (278)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC--CceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999876665655555322  25899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||......                 .++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        96 li~~Ag~~~~~~-----------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~  158 (278)
T 2bgk_A           96 MFGNVGVLSTTP-----------------YSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT  158 (278)
T ss_dssp             EEECCCCCCSSC-----------------SSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC
T ss_pred             EEECCcccCCCC-----------------CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccC
Confidence            999999854211                 123456778899999999999999999999999988789999999999988


Q ss_pred             cCC-CCcceeeecc
Q 035504          161 KNT-WQGAICYLTF  173 (174)
Q Consensus       161 ~~~-~~~~y~~~k~  173 (174)
                      +.+ +...|+.+|+
T Consensus       159 ~~~~~~~~Y~~sK~  172 (278)
T 2bgk_A          159 AGEGVSHVYTATKH  172 (278)
T ss_dssp             CCTTSCHHHHHHHH
T ss_pred             CCCCCCcchHHHHH
Confidence            877 7788999885

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.96  E-value=1.2e-29  Score=188.61  Aligned_cols=157  Identities=21%  Similarity=0.150  Sum_probs=129.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhh-cCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQ-FGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.++ +|++|
T Consensus         7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   85 (260)
T 2qq5_A            7 VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG-GQCVPVVCDSSQESEVRSLFEQVDREQQGRLD   85 (260)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-SEEEEEECCTTSHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC-CceEEEECCCCCHHHHHHHHHHHHHhcCCCce
Confidence            48999999999999999999999999999999887777777776654 35889999999999999999999886 99999


Q ss_pred             EEEeccc--ccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           80 ILVNNAA--IFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        80 ~li~~ag--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +||||||  +......              ...++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..
T Consensus        86 ~lvnnAg~g~~~~~~~--------------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  151 (260)
T 2qq5_A           86 VLVNNAYAGVQTILNT--------------RNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPG  151 (260)
T ss_dssp             EEEECCCTTHHHHHHT--------------TTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGG
T ss_pred             EEEECCcccccccccc--------------CCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChh
Confidence            9999995  3210000              00123345667788889999999999999999999888789999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.+ ...|+.+|+
T Consensus       152 ~~~~~~-~~~Y~asK~  166 (260)
T 2qq5_A          152 SLQYMF-NVPYGVGKA  166 (260)
T ss_dssp             GTSCCS-SHHHHHHHH
T ss_pred             hcCCCC-CCchHHHHH
Confidence            877543 578999885

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.96  E-value=2e-29  Score=189.42  Aligned_cols=154  Identities=15%  Similarity=0.064  Sum_probs=132.1

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+  +|||+++|++|+++|++|++++|+.  ..+..+++.+..+ ++.++.+|++|+++++++++++.++++++
T Consensus        28 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (280)
T 3nrc_A           28 KILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN-PAAVLPCDVISDQEIKDLFVELGKVWDGL  104 (280)
T ss_dssp             EEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC-CSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            58999988  8899999999999999999999986  3455566655554 38899999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccc-cCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT-PTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |+||||||+.....               ......+ .+.+++++.+++|+.++++++++++|.|+++ .|+||++||..
T Consensus       105 d~li~nAg~~~~~~---------------~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~  168 (280)
T 3nrc_A          105 DAIVHSIAFAPRDQ---------------LEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIG  168 (280)
T ss_dssp             CEEEECCCCCCGGG---------------SSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGG
T ss_pred             CEEEECCccCCCcc---------------cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccc
Confidence            99999999854311               0012334 6888999999999999999999999999877 59999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.++...|+++|+
T Consensus       169 ~~~~~~~~~~Y~asKa  184 (280)
T 3nrc_A          169 AEKAMPSYNTMGVAKA  184 (280)
T ss_dssp             GTSCCTTTHHHHHHHH
T ss_pred             cccCCCCchhhHHHHH
Confidence            9999999999999985

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.96  E-value=1.3e-29  Score=189.92  Aligned_cols=154  Identities=16%  Similarity=0.187  Sum_probs=130.8

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+  +|||++++++|+++|++|++++|+.+ ..+..+++.+..+. +.++.+|++|+++++++++++.+++|++
T Consensus         8 ~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~g~i   85 (275)
T 2pd4_A            8 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS-PYVYELDVSKEEHFKSLYNSVKKDLGSL   85 (275)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC-CCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCC-cEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            48999999  99999999999999999999999875 45555666554433 7889999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||+.....               ...++.+.+.+++++.+++|+.++++++++++|.|++  .|+||++||..+
T Consensus        86 d~lv~nAg~~~~~~---------------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~  148 (275)
T 2pd4_A           86 DFIVHSVAFAPKEA---------------LEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGS  148 (275)
T ss_dssp             EEEEECCCCCCGGG---------------GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGG
T ss_pred             CEEEECCccCcccc---------------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchh
Confidence            99999999854210               0012345678899999999999999999999999975  489999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       149 ~~~~~~~~~Y~asK~  163 (275)
T 2pd4_A          149 TKYMAHYNVMGLAKA  163 (275)
T ss_dssp             TSBCTTCHHHHHHHH
T ss_pred             cCCCCCchhhHHHHH
Confidence            999899999999985

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.96  E-value=3.9e-30  Score=189.60  Aligned_cols=153  Identities=24%  Similarity=0.319  Sum_probs=115.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEE-eeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|+++ .|+.+..++..+++...+ .++.++.+|++|+++++++++++.+.++++|
T Consensus         7 ~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   85 (247)
T 2hq1_A            7 TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG-INVVVAKGDVKNPEDVENMVKTAMDAFGRID   85 (247)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTT-CCEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            48999999999999999999999999998 556555666666666544 4589999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....                   ...+.+.+++++.+++|+.++++++++++|.|++++.++||++||..+.
T Consensus        86 ~vi~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  146 (247)
T 2hq1_A           86 ILVNNAGITRDT-------------------LMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGI  146 (247)
T ss_dssp             EEEECC----------------------------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC----
T ss_pred             EEEECCCCCCCC-------------------ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc
Confidence            999999985321                   1223455666778999999999999999999988777999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       147 ~~~~~~~~Y~~sK~  160 (247)
T 2hq1_A          147 IGNAGQANYAASKA  160 (247)
T ss_dssp             -----CHHHHHHHH
T ss_pred             cCCCCCcHhHHHHH
Confidence            98888999999885

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=2.4e-29  Score=188.75  Aligned_cols=154  Identities=23%  Similarity=0.276  Sum_probs=133.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+. .++.++.+|++|+++++++++++.+.++++|
T Consensus        34 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  113 (279)
T 1xg5_A           34 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVD  113 (279)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCC
Confidence            489999999999999999999999999999998777777777766542 3588899999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC--CeEEEEecCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL--PRIVNVSSNM  157 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~--g~iv~isS~~  157 (174)
                      +||||||...+.                   .+.+.+.+++++.+++|+.+++++++.++|.|++++.  |+||++||..
T Consensus       114 ~vi~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~  174 (279)
T 1xg5_A          114 ICINNAGLARPD-------------------TLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMS  174 (279)
T ss_dssp             EEEECCCCCCCC-------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGG
T ss_pred             EEEECCCCCCCC-------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChh
Confidence            999999975321                   2345577889999999999999999999999988764  8999999998


Q ss_pred             Cc--ccCCCCcceeeecc
Q 035504          158 GK--LKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~--~~~~~~~~y~~~k~  173 (174)
                      +.  .+.++...|+.+|.
T Consensus       175 ~~~~~~~~~~~~Y~~sK~  192 (279)
T 1xg5_A          175 GHRVLPLSVTHFYSATKY  192 (279)
T ss_dssp             GTSCCSCGGGHHHHHHHH
T ss_pred             hcccCCCCCCchhHHHHH
Confidence            87  56677788998885

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.96  E-value=5.5e-30  Score=190.48  Aligned_cols=154  Identities=25%  Similarity=0.254  Sum_probs=131.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC------CCceeEEEeecCChhhHHHHHHHHHhh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG------FDSVIFHQLDVADPATIHSLADFVRSQ   74 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dv~~~~~i~~~~~~~~~~   74 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+      ..++.++.+|++|.++++++++++.++
T Consensus         9 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (264)
T 2pd6_A            9 LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQAC   88 (264)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999877666666654433      135889999999999999999999999


Q ss_pred             cCCc-cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEE
Q 035504           75 FGKL-DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVN  152 (174)
Q Consensus        75 ~g~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~  152 (174)
                      ++++ |+||||||....                   ..+.+.+.+++++.+++|+.++++++++++|.|++++ .|+||+
T Consensus        89 ~g~i~d~vi~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~  149 (264)
T 2pd6_A           89 FSRPPSVVVSCAGITQD-------------------EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIIN  149 (264)
T ss_dssp             HSSCCSEEEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             hCCCCeEEEECCCcCCC-------------------cchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEE
Confidence            9999 999999998532                   1234557788999999999999999999999998765 689999


Q ss_pred             EecCCCcccCCCCcceeeecc
Q 035504          153 VSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       153 isS~~~~~~~~~~~~y~~~k~  173 (174)
                      +||..+..+.++...|+.+|.
T Consensus       150 isS~~~~~~~~~~~~Y~~sK~  170 (264)
T 2pd6_A          150 ISSIVGKVGNVGQTNYAASKA  170 (264)
T ss_dssp             ECCTHHHHCCTTBHHHHHHHH
T ss_pred             ECChhhccCCCCChhhHHHHH
Confidence            999999888889999999885

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.96  E-value=2.1e-29  Score=187.96  Aligned_cols=154  Identities=15%  Similarity=0.134  Sum_probs=131.1

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+  +|||+++|++|+++|++|++++|+.. ..+..+++.+..+. +.++.+|++|+++++++++++.+++|++
T Consensus        16 ~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   93 (271)
T 3ek2_A           16 RILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGS-ELVFPCDVADDAQIDALFASLKTHWDSL   93 (271)
T ss_dssp             EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC-CCEEECCTTCHHHHHHHHHHHHHHCSCE
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh-hHHHHHHHHHHcCC-cEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            58999998  99999999999999999999999843 44555556555544 8899999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccc-cCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT-PTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |+||||||+.....               ...+..+ .+.+++++.+++|+.++++++++++|.|++  .|+||++||..
T Consensus        94 d~lv~nAg~~~~~~---------------~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~  156 (271)
T 3ek2_A           94 DGLVHSIGFAPREA---------------IAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLG  156 (271)
T ss_dssp             EEEEECCCCCCGGG---------------GSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGG
T ss_pred             CEEEECCccCcccc---------------ccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccc
Confidence            99999999864311               0012233 688899999999999999999999999974  48999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.++...|+.+|+
T Consensus       157 ~~~~~~~~~~Y~asKa  172 (271)
T 3ek2_A          157 AERAIPNYNTMGLAKA  172 (271)
T ss_dssp             GTSBCTTTTHHHHHHH
T ss_pred             cccCCCCccchhHHHH
Confidence            9999999999999985

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.96  E-value=4.8e-30  Score=191.00  Aligned_cols=144  Identities=24%  Similarity=0.243  Sum_probs=123.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+...+          .++.++.+|++|+++++++++++.+++|++|+
T Consensus        30 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           30 VVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----------PDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----------TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------CceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            48999999999999999999999999999998643211          25889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+....                   ++.+.+.+++++.+++|+.|+++++++++|.|++++.|+||++||..+..
T Consensus       100 lv~nAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (260)
T 3un1_A          100 LVNNAGVFLAK-------------------PFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQ  160 (260)
T ss_dssp             EEECCCCCCCC-------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTS
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcc
Confidence            99999985431                   24566888999999999999999999999999998889999999988865


Q ss_pred             c--CCCCcceeeecc
Q 035504          161 K--NTWQGAICYLTF  173 (174)
Q Consensus       161 ~--~~~~~~y~~~k~  173 (174)
                      +  .++...|+.+|+
T Consensus       161 ~~~~~~~~~Y~~sKa  175 (260)
T 3un1_A          161 PMVGMPSALASLTKG  175 (260)
T ss_dssp             CBTTCCCHHHHHHHH
T ss_pred             CCCCCccHHHHHHHH
Confidence            4  344567777774

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.96  E-value=3.3e-30  Score=192.46  Aligned_cols=142  Identities=29%  Similarity=0.329  Sum_probs=125.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..            .....+.+|++|.++++++++++.+++|++|+
T Consensus        30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~------------~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~   97 (266)
T 3uxy_A           30 VALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI------------AADLHLPGDLREAAYADGLPGAVAAGLGRLDI   97 (266)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS------------CCSEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------------HhhhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            489999999999999999999999999999975432            11344589999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+...                   ..+.+.+.++|++.|++|+.|+++++++++|+|++++.|+||++||..+..
T Consensus        98 lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  158 (266)
T 3uxy_A           98 VVNNAGVISR-------------------GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR  158 (266)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC
Confidence            9999998543                   134566888999999999999999999999999988889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       159 ~~~~~~~Y~asKa  171 (266)
T 3uxy_A          159 PGPGHALYCLTKA  171 (266)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCChHHHHHHH
Confidence            9999999999985

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.96  E-value=1.7e-29  Score=191.31  Aligned_cols=154  Identities=17%  Similarity=0.113  Sum_probs=134.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+...+..+++.+..+.++.++.+|++|.++++++++++.+.++++|+
T Consensus        28 ~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  107 (302)
T 1w6u_A           28 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNI  107 (302)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999999887777777776653356999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhcc-CCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQ-LSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~-~~~~g~iv~isS~~~~  159 (174)
                      +|||||.....                   +..+.+.+++++.+++|+.++++++++++|.|. +++.++||++||..+.
T Consensus       108 li~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~  168 (302)
T 1w6u_A          108 VINNAAGNFIS-------------------PTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE  168 (302)
T ss_dssp             EEECCCCCCCS-------------------CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH
T ss_pred             EEECCCCCCCC-------------------ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccc
Confidence            99999974321                   234557788999999999999999999999997 4556899999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       169 ~~~~~~~~Y~~sK~  182 (302)
T 1w6u_A          169 TGSGFVVPSASAKA  182 (302)
T ss_dssp             HCCTTCHHHHHHHH
T ss_pred             cCCCCcchhHHHHH
Confidence            88888899999885

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.96  E-value=1.9e-29  Score=187.70  Aligned_cols=156  Identities=23%  Similarity=0.266  Sum_probs=132.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+...+..+++    +.++.++.+|++|+++++++++++.++++++|+
T Consensus        14 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           14 VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            4899999999999999999999999999999877666666555    245899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC------CCCeEEEEe
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS------DLPRIVNVS  154 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~iv~is  154 (174)
                      ||||||.....+.             .+.....+.+.+++++.+++|+.++++++++++|.|+++      +.++||++|
T Consensus        90 li~~Ag~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~is  156 (265)
T 2o23_A           90 AVNCAGIAVASKT-------------YNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTA  156 (265)
T ss_dssp             EEECCCCCCCCCS-------------EETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEEC
T ss_pred             EEECCccCCCCcc-------------ccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeC
Confidence            9999998543210             000111245778899999999999999999999999887      678999999


Q ss_pred             cCCCcccCCCCcceeeecc
Q 035504          155 SNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~~~~~~~~~~y~~~k~  173 (174)
                      |..+..+.++...|+.+|+
T Consensus       157 S~~~~~~~~~~~~Y~~sK~  175 (265)
T 2o23_A          157 SVAAFEGQVGQAAYSASKG  175 (265)
T ss_dssp             CTHHHHCCTTCHHHHHHHH
T ss_pred             ChhhcCCCCCCchhHHHHH
Confidence            9999888888899999985

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.96  E-value=1.2e-29  Score=187.83  Aligned_cols=143  Identities=22%  Similarity=0.202  Sum_probs=126.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+.        .. .  .+.++.+|++|+++++++++++.++++++|+
T Consensus         9 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~-~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X            9 NVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQ-Y--PFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SC-C--SSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hc-C--CceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998541        11 1  2788899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                   ++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        78 lv~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~  138 (250)
T 2fwm_X           78 LVNAAGILRMG-------------------ATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT  138 (250)
T ss_dssp             EEECCCCCCCC-------------------CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS
T ss_pred             EEECCCcCCCC-------------------CcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC
Confidence            99999985321                   23456788899999999999999999999999888789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       139 ~~~~~~~Y~~sK~  151 (250)
T 2fwm_X          139 PRIGMSAYGASKA  151 (250)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCchHHHHHH
Confidence            9899999999985

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.96  E-value=1.8e-29  Score=185.65  Aligned_cols=144  Identities=20%  Similarity=0.223  Sum_probs=125.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+.   ..+++   +   +.++.+|++| ++++++++++.+.++++|+
T Consensus         4 ~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~---~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G---AVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T---CEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C---cEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999998764   22333   1   7788999999 9999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   .+..+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        74 lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  134 (239)
T 2ekp_A           74 LVHAAAVNVR-------------------KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFT  134 (239)
T ss_dssp             EEECCCCCCC-------------------CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcc
Confidence            9999997532                   123456788999999999999999999999999887789999999999988


Q ss_pred             cC--CCCcceeeecc
Q 035504          161 KN--TWQGAICYLTF  173 (174)
Q Consensus       161 ~~--~~~~~y~~~k~  173 (174)
                      +.  ++...|+.+|+
T Consensus       135 ~~~~~~~~~Y~~sK~  149 (239)
T 2ekp_A          135 AGGPVPIPAYTTAKT  149 (239)
T ss_dssp             CCTTSCCHHHHHHHH
T ss_pred             CCCCCCCccHHHHHH
Confidence            77  78889999885

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.96  E-value=4.5e-29  Score=187.47  Aligned_cols=154  Identities=18%  Similarity=0.192  Sum_probs=130.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++ ++++++|+
T Consensus        32 ~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~  106 (281)
T 3ppi_A           32 SAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----GNRAEFVSTNVTSEDSVLAAIEAA-NQLGRLRY  106 (281)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHH-TTSSEEEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHH-HHhCCCCe
Confidence            4899999999999999999999999999999988777776666    246999999999999999999999 88999999


Q ss_pred             EEec-ccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccC------CCCCeEEEE
Q 035504           81 LVNN-AAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQL------SDLPRIVNV  153 (174)
Q Consensus        81 li~~-ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~------~~~g~iv~i  153 (174)
                      +||| +|......              .......+.+.+++++.+++|+.+++++++.++|.|.+      ++.|+||++
T Consensus       107 lv~~aag~~~~~~--------------~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~i  172 (281)
T 3ppi_A          107 AVVAHGGFGVAQR--------------IVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLT  172 (281)
T ss_dssp             EEECCCCCCCCCC--------------SBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEE
T ss_pred             EEEccCccccccc--------------ccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEE
Confidence            9999 54432211              00011235677889999999999999999999999976      456899999


Q ss_pred             ecCCCcccCCCCcceeeecc
Q 035504          154 SSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       154 sS~~~~~~~~~~~~y~~~k~  173 (174)
                      ||..+..+.++...|+++|+
T Consensus       173 sS~~~~~~~~~~~~Y~asKa  192 (281)
T 3ppi_A          173 ASIAGYEGQIGQTAYAAAKA  192 (281)
T ss_dssp             CCGGGTSCCTTCHHHHHHHH
T ss_pred             ecccccCCCCCCcccHHHHH
Confidence            99999999999999999985

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.96  E-value=2.6e-29  Score=185.90  Aligned_cols=149  Identities=24%  Similarity=0.238  Sum_probs=129.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCce-eEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSV-IFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++.    .++ .++.+|++|.++++++++++.+ ++++|
T Consensus        13 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~id   87 (254)
T 2wsb_A           13 CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG----AAVAARIVADVTDAEAMTAAAAEAEA-VAPVS   87 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGEEEEEECCTTCHHHHHHHHHHHHH-HSCCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----ccceeEEEEecCCHHHHHHHHHHHHh-hCCCc
Confidence            48999999999999999999999999999999876666665552    246 8899999999999999999998 99999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||.....                   ...+.+.+++++.+++|+.++++++++++|.|++++.++||++||..+.
T Consensus        88 ~li~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  148 (254)
T 2wsb_A           88 ILVNSAGIARLH-------------------DALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGT  148 (254)
T ss_dssp             EEEECCCCCCCB-------------------CSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             EEEECCccCCCC-------------------CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhc
Confidence            999999985431                   2334577888999999999999999999999988878999999999998


Q ss_pred             ccCCCC--cceeeecc
Q 035504          160 LKNTWQ--GAICYLTF  173 (174)
Q Consensus       160 ~~~~~~--~~y~~~k~  173 (174)
                      .+.+..  ..|+.+|.
T Consensus       149 ~~~~~~~~~~Y~~sK~  164 (254)
T 2wsb_A          149 IVNRPQFASSYMASKG  164 (254)
T ss_dssp             SCCSSSCBHHHHHHHH
T ss_pred             cCCCCCcchHHHHHHH
Confidence            887777  88998885

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.96  E-value=2.5e-29  Score=187.09  Aligned_cols=154  Identities=19%  Similarity=0.188  Sum_probs=129.7

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+  +|||++++++|+++|++|++++|+.+ ..+..+++.+..+. +.++.+|++|+++++++++++.+++|++
T Consensus        10 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (261)
T 2wyu_A           10 KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGG-ALLFRADVTQDEELDALFAGVKEAFGGL   87 (261)
T ss_dssp             EEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTC-CEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCC-cEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            48999999  99999999999999999999999864 44455556554333 7889999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||......               ...++.+.+.+++++.+++|+.++++++++++|.|++  .|+||++||..+
T Consensus        88 D~lv~~Ag~~~~~~---------------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~  150 (261)
T 2wyu_A           88 DYLVHAIAFAPREA---------------MEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYAS  150 (261)
T ss_dssp             EEEEECCCCCCHHH---------------HSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGG
T ss_pred             CEEEECCCCCCccc---------------CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccc
Confidence            99999999853200               0012345678899999999999999999999999974  489999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+.+|+
T Consensus       151 ~~~~~~~~~Y~asK~  165 (261)
T 2wyu_A          151 EKVVPKYNVMAIAKA  165 (261)
T ss_dssp             TSBCTTCHHHHHHHH
T ss_pred             cCCCCCchHHHHHHH
Confidence            998888899999985

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.96  E-value=2.6e-29  Score=187.34  Aligned_cols=154  Identities=17%  Similarity=0.101  Sum_probs=129.7

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+  +|||++++++|+++|++|++++|+. ...+..+++....+. ..++.+|++|+++++++++++.+++|++
T Consensus        11 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T 1qsg_A           11 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS-DIVLQCDVAEDASIDTMFAELGKVWPKF   88 (265)
T ss_dssp             EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTC-CCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCC-cEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            48999999  9999999999999999999999986 445555666554433 4789999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccc-cCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT-PTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |+||||||+.....               ...++.+ .+.+++++.+++|+.++++++++++|.|++  .|+||++||..
T Consensus        89 D~lv~~Ag~~~~~~---------------~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~  151 (265)
T 1qsg_A           89 DGFVHSIGFAPGDQ---------------LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLG  151 (265)
T ss_dssp             EEEEECCCCCCGGG---------------GSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGG
T ss_pred             CEEEECCCCCCccc---------------cCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchh
Confidence            99999999853210               0012344 678899999999999999999999999974  48999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.++...|+.+|+
T Consensus       152 ~~~~~~~~~~Y~~sK~  167 (265)
T 1qsg_A          152 AERAIPNYNVMGLAKA  167 (265)
T ss_dssp             GTSBCTTTTHHHHHHH
T ss_pred             hccCCCCchHHHHHHH
Confidence            9998888999999985

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.96  E-value=2.1e-29  Score=184.23  Aligned_cols=146  Identities=18%  Similarity=0.210  Sum_probs=126.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.+.+   |+
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~---d~   75 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----SNNVGYRARDLASHQEVEQLFEQLDSIP---ST   75 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----SSCCCEEECCTTCHHHHHHHHHSCSSCC---SE
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----hhccCeEeecCCCHHHHHHHHHHHhhcC---CE
Confidence            5899999999999999999999999999999987766665554    3468899999999999999988765443   99


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   ..+.+.+.+++++.+++|+.++++++++++|.|++++ ++||++||..+..
T Consensus        76 lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~  135 (230)
T 3guy_A           76 VVHSAGSGYF-------------------GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQ  135 (230)
T ss_dssp             EEECCCCCCC-------------------SCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTS
T ss_pred             EEEeCCcCCC-------------------CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCC
Confidence            9999997542                   2244568899999999999999999999999998876 5999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       136 ~~~~~~~Y~asKa  148 (230)
T 3guy_A          136 PKAQESTYCAVKW  148 (230)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCchhHHHHH
Confidence            9999999999985

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.96  E-value=1.8e-29  Score=187.68  Aligned_cols=154  Identities=23%  Similarity=0.202  Sum_probs=129.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+...+..+++.+..+.++.++.+|++|+++++++++++.+.++++|+
T Consensus        16 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   95 (265)
T 1h5q_A           16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   95 (265)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            48999999999999999999999999999997665555566665443456899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||||.....                   +..+.+.+++++.+++|+.++++++++++|.|.+++ .++||++||..+.
T Consensus        96 li~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~  156 (265)
T 1h5q_A           96 LIANAGVSVVK-------------------PATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQ  156 (265)
T ss_dssp             EEECCCCCCCS-------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             EEECCCcCCCC-------------------chhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhh
Confidence            99999985321                   234557788999999999999999999999997765 4899999999887


Q ss_pred             ccCCC-------Ccceeeecc
Q 035504          160 LKNTW-------QGAICYLTF  173 (174)
Q Consensus       160 ~~~~~-------~~~y~~~k~  173 (174)
                      .+.+.       ...|+.+|+
T Consensus       157 ~~~~~~~~~~~~~~~Y~~sK~  177 (265)
T 1h5q_A          157 IINQSSLNGSLTQVFYNSSKA  177 (265)
T ss_dssp             SCCEEETTEECSCHHHHHHHH
T ss_pred             ccccccccccccccccHHHHH
Confidence            76542       678888874

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.96  E-value=4.8e-30  Score=189.62  Aligned_cols=142  Identities=24%  Similarity=0.277  Sum_probs=118.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..+            .+..+.+|++|+++++++++++.++++++|+
T Consensus        17 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   84 (247)
T 1uzm_A           17 SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   84 (247)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH------------HhcCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999999999999999764321            1224889999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   .++.+.+.+++++++++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        85 lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  145 (247)
T 1uzm_A           85 LVSNAGLSAD-------------------AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW  145 (247)
T ss_dssp             EEEECSCCC------------------------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc
Confidence            9999998532                   123456788899999999999999999999999888789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       146 ~~~~~~~Y~~sK~  158 (247)
T 1uzm_A          146 GIGNQANYAASKA  158 (247)
T ss_dssp             ---CCHHHHHHHH
T ss_pred             CCCCChhHHHHHH
Confidence            8889999999985

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.96  E-value=2.6e-29  Score=188.44  Aligned_cols=154  Identities=19%  Similarity=0.225  Sum_probs=131.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|+++++++++++.+.++++|+
T Consensus        36 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  114 (279)
T 3ctm_A           36 VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG-VHSKAYKCNISDPKSVEETISQQEKDFGTIDV  114 (279)
T ss_dssp             EEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHC-SCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcceEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999998766666555555444 45889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCccccccc-ccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIV-TPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +|||||.....                  .... +.+.+++++.+++|+.+++++++.++|.|++++.++||++||..+.
T Consensus       115 li~~Ag~~~~~------------------~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~  176 (279)
T 3ctm_A          115 FVANAGVTWTQ------------------GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGK  176 (279)
T ss_dssp             EEECGGGSTTC--------------------CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTS
T ss_pred             EEECCcccccC------------------CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhc
Confidence            99999985421                  1122 4567889999999999999999999999988778999999999998


Q ss_pred             cc--CCCCcceeeecc
Q 035504          160 LK--NTWQGAICYLTF  173 (174)
Q Consensus       160 ~~--~~~~~~y~~~k~  173 (174)
                      .+  .+....|+.+|+
T Consensus       177 ~~~~~~~~~~Y~~sK~  192 (279)
T 3ctm_A          177 IVNIPQLQAPYNTAKA  192 (279)
T ss_dssp             CC---CCHHHHHHHHH
T ss_pred             cCCCCCCcccHHHHHH
Confidence            87  777888998885

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=2.3e-29  Score=187.82  Aligned_cols=146  Identities=29%  Similarity=0.312  Sum_probs=126.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+...+..+++.+.. +.++.++.+|++|+++++++++++.+++|++|
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   88 (267)
T 2gdz_A            9 VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLD   88 (267)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999999999877666666665432 23588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC---CCeEEEEecC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD---LPRIVNVSSN  156 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~isS~  156 (174)
                      +||||||...                +           +++++.+++|+.+++.+++.++|.|++++   .|+||++||.
T Consensus        89 ~lv~~Ag~~~----------------~-----------~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  141 (267)
T 2gdz_A           89 ILVNNAGVNN----------------E-----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  141 (267)
T ss_dssp             EEEECCCCCC----------------S-----------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             EEEECCCCCC----------------h-----------hhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCc
Confidence            9999999731                1           23456699999999999999999998753   5899999999


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      .+..+.++...|+.+|+
T Consensus       142 ~~~~~~~~~~~Y~~sK~  158 (267)
T 2gdz_A          142 AGLMPVAQQPVYCASKH  158 (267)
T ss_dssp             GGTSCCTTCHHHHHHHH
T ss_pred             cccCCCCCCchHHHHHH
Confidence            99998888899999985

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.96  E-value=2.2e-29  Score=186.76  Aligned_cols=148  Identities=14%  Similarity=0.032  Sum_probs=125.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+ +...+. ++..+     |+++++++++++.++++++|+
T Consensus         3 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~-~~~~~-----d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYP-QLKPM-----SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCT-TSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCC-cEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence            48999999999999999999999999999998776655544 555443 34333     788999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                  .++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        76 lv~nAg~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  137 (254)
T 1zmt_A           76 LVSNDIFAPEF------------------QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG  137 (254)
T ss_dssp             EEEECCCCCCC------------------CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS
T ss_pred             EEECCCcCCCC------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc
Confidence            99999985111                  123456788999999999999999999999999887789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       138 ~~~~~~~Y~~sK~  150 (254)
T 1zmt_A          138 PWKELSTYTSARA  150 (254)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCchHHHHHHH
Confidence            9899999999985

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.96  E-value=4.7e-30  Score=190.38  Aligned_cols=142  Identities=22%  Similarity=0.270  Sum_probs=121.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..            ..+.++.+|++|+++++++++++.++++++|+
T Consensus        23 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~   90 (253)
T 2nm0_A           23 SVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP------------EGFLAVKCDITDTEQVEQAYKEIEETHGPVEV   90 (253)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh------------ccceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            489999999999999999999999999999975432            12778999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                   ++.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        91 lv~nAg~~~~~-------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  151 (253)
T 2nm0_A           91 LIANAGVTKDQ-------------------LLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL  151 (253)
T ss_dssp             EEEECSCCTTT-------------------C---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC
T ss_pred             EEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC
Confidence            99999985321                   12233455566779999999999999999999887779999999999998


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       152 ~~~~~~~Y~asK~  164 (253)
T 2nm0_A          152 GSAGQANYAASKA  164 (253)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHH
Confidence            8888889999885

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=2.1e-29  Score=186.03  Aligned_cols=144  Identities=20%  Similarity=0.209  Sum_probs=121.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++.. ++     .++.++.+|++|+++++    ++.+.++++|+
T Consensus         8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~-----~~~~~~~~D~~~~~~~~----~~~~~~~~id~   77 (246)
T 2ag5_A            8 VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY-----PGIQTRVLDVTKKKQID----QFANEVERLDV   77 (246)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS-----TTEEEEECCTTCHHHHH----HHHHHCSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc-----cCceEEEeeCCCHHHHH----HHHHHhCCCCE
Confidence            4899999999999999999999999999999865543322 22     25888999999999987    45557889999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   ++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        78 lv~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  138 (246)
T 2ag5_A           78 LFNVAGFVHHG-------------------TVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV  138 (246)
T ss_dssp             EEECCCCCCCB-------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT
T ss_pred             EEECCccCCCC-------------------CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCc
Confidence            99999985421                   23456788899999999999999999999999887789999999999988


Q ss_pred             cCC-CCcceeeecc
Q 035504          161 KNT-WQGAICYLTF  173 (174)
Q Consensus       161 ~~~-~~~~y~~~k~  173 (174)
                      +.+ +...|+.+|+
T Consensus       139 ~~~~~~~~Y~~sK~  152 (246)
T 2ag5_A          139 KGVVNRCVYSTTKA  152 (246)
T ss_dssp             BCCTTBHHHHHHHH
T ss_pred             CCCCCCccHHHHHH
Confidence            877 8889999885

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.96  E-value=9.2e-30  Score=208.79  Aligned_cols=149  Identities=24%  Similarity=0.335  Sum_probs=126.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++.++..  .++..+++.+.+ .++..+.+|++  ++.+++++++.+++|+||+
T Consensus       324 valVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g-~~~~~~~~Dv~--~~~~~~~~~~~~~~G~iDi  398 (604)
T 2et6_A          324 VVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAG-GEAWPDQHDVA--KDSEAIIKNVIDKYGTIDI  398 (604)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTT-CEEEEECCCHH--HHHHHHHHHHHHHHSCCCE
T ss_pred             eEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcC-CeEEEEEcChH--HHHHHHHHHHHHhcCCCCE
Confidence            489999999999999999999999999988642  345556666544 34777888884  4567888999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+...                   .++.+++.++|+++|++|+.|+++++|+++|+|++++.|+||++||.++..
T Consensus       399 LVnNAGi~~~-------------------~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~  459 (604)
T 2et6_A          399 LVNNAGILRD-------------------RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY  459 (604)
T ss_dssp             EEECCCCCCC-------------------BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc
Confidence            9999998532                   134566888999999999999999999999999888889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+++..|+++|+
T Consensus       460 ~~~~~~~Y~asKa  472 (604)
T 2et6_A          460 GNFGQANYSSSKA  472 (604)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCChhHHHHHH
Confidence            9999999999985

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.96  E-value=7.3e-30  Score=195.80  Aligned_cols=152  Identities=22%  Similarity=0.249  Sum_probs=125.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH---HHHHHh--hcCCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE---AVEKLK--HSGFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~---~~~~l~--~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      ++|||||++|||++++++|+++|++|++++|+.....+   ..+.+.  ...+.++.++.+|++|+++++++++++  .+
T Consensus         4 ~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~--~~   81 (327)
T 1jtv_A            4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV--TE   81 (327)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC--TT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH--hc
Confidence            58999999999999999999999998888876443322   222222  112346899999999999999999988  35


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS  155 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS  155 (174)
                      +++|+||||||+...                   .++.+.+.++++++|++|+.++++++++++|+|++++.|+||++||
T Consensus        82 g~iD~lVnnAG~~~~-------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS  142 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLL-------------------GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGS  142 (327)
T ss_dssp             SCCSEEEECCCCCCC-------------------SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred             CCCCEEEECCCcCCC-------------------CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECC
Confidence            899999999997432                   1234567889999999999999999999999998777799999999


Q ss_pred             CCCcccCCCCcceeeecc
Q 035504          156 NMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       156 ~~~~~~~~~~~~y~~~k~  173 (174)
                      ..+..+.+....|+++|+
T Consensus       143 ~~~~~~~~~~~~Y~aSK~  160 (327)
T 1jtv_A          143 VGGLMGLPFNDVYCASKF  160 (327)
T ss_dssp             GGGTSCCTTCHHHHHHHH
T ss_pred             cccccCCCCChHHHHHHH
Confidence            999999899999999985

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.96  E-value=2.3e-29  Score=192.40  Aligned_cols=150  Identities=21%  Similarity=0.257  Sum_probs=129.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEe---------eChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTA---------RDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~---------r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      ++|||||++|||+++|++|+++|++|++++         |+.+..++..+++...++.    ..+|++|.++++++++++
T Consensus        11 ~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~----~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A           11 VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK----AVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE----EEEECCCGGGHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe----EEEeCCCHHHHHHHHHHH
Confidence            489999999999999999999999999964         4556666667777665432    358999999999999999


Q ss_pred             HhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEE
Q 035504           72 RSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIV  151 (174)
Q Consensus        72 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv  151 (174)
                      .++++++|+||||||+....                   ++.+.+.++++..|++|+.|+++++++++|+|++++.|+||
T Consensus        87 ~~~~g~iD~lVnnAG~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV  147 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAGILRDR-------------------SFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRII  147 (319)
T ss_dssp             HHHTSCCCEEEECCCCCCCC-------------------CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             HHHcCCCCEEEECCCCCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEE
Confidence            99999999999999985421                   23456788999999999999999999999999888789999


Q ss_pred             EEecCCCcccCCCCcceeeecc
Q 035504          152 NVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       152 ~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      ++||..+..+.++...|+.+|.
T Consensus       148 ~vsS~~~~~~~~~~~~Y~aSK~  169 (319)
T 1gz6_A          148 MTASASGIYGNFGQANYSAAKL  169 (319)
T ss_dssp             EECCHHHHHCCTTCHHHHHHHH
T ss_pred             EECChhhccCCCCCHHHHHHHH
Confidence            9999999888889999999985

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.96  E-value=3.2e-29  Score=185.58  Aligned_cols=151  Identities=23%  Similarity=0.268  Sum_probs=130.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEE-eeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC---
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG---   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g---   76 (174)
                      ++|||||++|||++++++|+++|++|+++ .|+.+..++..+++...+ .++.++.+|++|.++++++++++.+.++   
T Consensus         9 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   87 (255)
T 3icc_A            9 VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG-GSAFSIGANLESLHGVEALYSSLDNELQNRT   87 (255)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcC-CceEEEecCcCCHHHHHHHHHHHHHHhcccc
Confidence            48999999999999999999999999886 556666777777777665 4588999999999999999999988764   


Q ss_pred             ---CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEE
Q 035504           77 ---KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNV  153 (174)
Q Consensus        77 ---~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~i  153 (174)
                         ++|++|||||+...                   ....+.+.+++++.+++|+.+++++++.++|.|++  .|+||++
T Consensus        88 ~~~~id~lv~nAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~i  146 (255)
T 3icc_A           88 GSTKFDILINNAGIGPG-------------------AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINI  146 (255)
T ss_dssp             SSSCEEEEEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEE
T ss_pred             cCCcccEEEECCCCCCC-------------------CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEe
Confidence               49999999998432                   12345678889999999999999999999999953  4899999


Q ss_pred             ecCCCcccCCCCcceeeecc
Q 035504          154 SSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       154 sS~~~~~~~~~~~~y~~~k~  173 (174)
                      ||..+..+.|+...|+.+|+
T Consensus       147 sS~~~~~~~~~~~~Y~asKa  166 (255)
T 3icc_A          147 SSAATRISLPDFIAYSMTKG  166 (255)
T ss_dssp             CCGGGTSCCTTBHHHHHHHH
T ss_pred             CChhhccCCCCcchhHHhHH
Confidence            99999999999999999985

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.96  E-value=2.3e-29  Score=185.91  Aligned_cols=146  Identities=25%  Similarity=0.271  Sum_probs=118.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.    .++.+..+|++|.++++++++    +++++|+
T Consensus        16 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~~~id~   87 (249)
T 3f9i_A           16 TSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLIS----KTSNLDI   87 (249)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHH----TCSCCSE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHH----hcCCCCE
Confidence            48999999999999999999999999999999877766666653    358899999999999887765    4478999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   ...+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        88 li~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  148 (249)
T 3f9i_A           88 LVCNAGITSDT-------------------LAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA  148 (249)
T ss_dssp             EEECCC--------------------------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--
T ss_pred             EEECCCCCCCC-------------------ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc
Confidence            99999985432                   12344566778889999999999999999999888889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       149 ~~~~~~~Y~~sK~  161 (249)
T 3f9i_A          149 GNPGQANYCASKA  161 (249)
T ss_dssp             CCSCSHHHHHHHH
T ss_pred             CCCCCchhHHHHH
Confidence            9999999999985

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=1.2e-28  Score=186.89  Aligned_cols=153  Identities=24%  Similarity=0.230  Sum_probs=131.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc----CCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS----GFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+...+..+++...    .+.++.++.+|++|+++++++++++.+++|
T Consensus        20 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   99 (303)
T 1yxm_A           20 VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFG   99 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999999999999988777777777652    234689999999999999999999999999


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|+||||||....                   ....+.+.+++++.+++|+.++++++++++|.|.+++.|+||++||.
T Consensus       100 ~id~li~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~  160 (303)
T 1yxm_A          100 KINFLVNNGGGQFL-------------------SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP  160 (303)
T ss_dssp             CCCEEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC
T ss_pred             CCCEEEECCCCCCC-------------------CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEee
Confidence            99999999996432                   12345577889999999999999999999996554446899999999


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      . ..+.+....|+.+|+
T Consensus       161 ~-~~~~~~~~~Y~~sK~  176 (303)
T 1yxm_A          161 T-KAGFPLAVHSGAARA  176 (303)
T ss_dssp             C-TTCCTTCHHHHHHHH
T ss_pred             c-ccCCCcchhhHHHHH
Confidence            8 777888889988874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.96  E-value=2.7e-29  Score=186.02  Aligned_cols=154  Identities=21%  Similarity=0.282  Sum_probs=132.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++|+ .+..++..+++...+ .++.++.+|++|+++++++++++.++++++|
T Consensus         9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (258)
T 3afn_B            9 RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-GDAAFFAADLATSEACQQLVDEFVAKFGGID   87 (258)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999999998 666667777776554 4589999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC--C---CeEEEEe
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD--L---PRIVNVS  154 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~---g~iv~is  154 (174)
                      +||||||.....                  .+..+.+.+++++.+++|+.++++++++++|.|++++  .   ++||++|
T Consensus        88 ~vi~~Ag~~~~~------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~s  149 (258)
T 3afn_B           88 VLINNAGGLVGR------------------KPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTG  149 (258)
T ss_dssp             EEEECCCCCCCC------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             EEEECCCCcCCc------------------CccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEec
Confidence            999999972211                  1234557788999999999999999999999997654  3   8999999


Q ss_pred             cCCCcc-cCCCCcceeeecc
Q 035504          155 SNMGKL-KNTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~~~-~~~~~~~y~~~k~  173 (174)
                      |..+.. +.++...|+.+|+
T Consensus       150 S~~~~~~~~~~~~~Y~~sK~  169 (258)
T 3afn_B          150 SIAGHTGGGPGAGLYGAAKA  169 (258)
T ss_dssp             CTHHHHCCCTTCHHHHHHHH
T ss_pred             chhhccCCCCCchHHHHHHH
Confidence            999887 7788899999885

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.96  E-value=9.4e-29  Score=196.86  Aligned_cols=150  Identities=25%  Similarity=0.255  Sum_probs=128.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC-cc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK-LD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~-id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+... ++..+...+.   +..++.+|++|+++++++++++.+++++ ||
T Consensus       215 ~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~---~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          215 VAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV---GGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH---TCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             EEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            58999999999999999999999999999986432 2222222222   2568999999999999999999999986 99


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||+...                   ..+.+.+.++|+++|++|+.|++++++++.|.|++++.|+||++||+.+.
T Consensus       291 ~lV~nAGv~~~-------------------~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~  351 (454)
T 3u0b_A          291 ILVNNAGITRD-------------------KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGI  351 (454)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHH
T ss_pred             EEEECCcccCC-------------------CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhC
Confidence            99999998543                   12456688999999999999999999999999998888999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+++..|+++|+
T Consensus       352 ~g~~g~~~YaasKa  365 (454)
T 3u0b_A          352 AGNRGQTNYATTKA  365 (454)
T ss_dssp             HCCTTCHHHHHHHH
T ss_pred             CCCCCCHHHHHHHH
Confidence            99999999999996

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.96  E-value=1.9e-28  Score=183.01  Aligned_cols=151  Identities=25%  Similarity=0.251  Sum_probs=130.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|+++|++|++++| +.+..++..++++..+ .++.++.+|++|+++++++++++.++++++|
T Consensus        23 ~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d  101 (274)
T 1ja9_A           23 VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG-AQGVAIQADISKPSEVVALFDKAVSHFGGLD  101 (274)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999999999 6666666666776644 4588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||....                   ....+.+.+++++.+++|+.++++++++++|.|+ ++ ++||++||..+.
T Consensus       102 ~vi~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~-~~iv~~sS~~~~  160 (274)
T 1ja9_A          102 FVMSNSGMEVW-------------------CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-RG-GRIILTSSIAAV  160 (274)
T ss_dssp             EEECCCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-EE-EEEEEECCGGGT
T ss_pred             EEEECCCCCCC-------------------cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hC-CEEEEEcChHhc
Confidence            99999997532                   1234567888999999999999999999999997 33 899999999998


Q ss_pred             -ccCCCCcceeeecc
Q 035504          160 -LKNTWQGAICYLTF  173 (174)
Q Consensus       160 -~~~~~~~~y~~~k~  173 (174)
                       .+.++...|+.+|+
T Consensus       161 ~~~~~~~~~Y~~sK~  175 (274)
T 1ja9_A          161 MTGIPNHALYAGSKA  175 (274)
T ss_dssp             CCSCCSCHHHHHHHH
T ss_pred             cCCCCCCchHHHHHH
Confidence             67788899999885

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.96  E-value=6e-29  Score=183.37  Aligned_cols=147  Identities=16%  Similarity=0.052  Sum_probs=124.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEE-e--eChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLT-A--RDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++|||||++|||++++++|+++|++|+++ +  |+.+..++..+++  .        ..|+.|+++++++++++.+++|+
T Consensus         3 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~--------~~~~~~~~~v~~~~~~~~~~~g~   72 (244)
T 1zmo_A            3 IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--P--------GTIALAEQKPERLVDATLQHGEA   72 (244)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--T--------TEEECCCCCGGGHHHHHGGGSSC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--C--------CCcccCHHHHHHHHHHHHHHcCC
Confidence            48999999999999999999999999999 6  8877666655554  1        12444888999999999999999


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|+||||||+....                ...++.+.+.+++++++++|+.++++++++++|.|++++.|+||++||..
T Consensus        73 iD~lv~~Ag~~~~~----------------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~  136 (244)
T 1zmo_A           73 IDTIVSNDYIPRPM----------------NRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSV  136 (244)
T ss_dssp             EEEEEECCCCCTTG----------------GGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGG
T ss_pred             CCEEEECCCcCCCC----------------CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChh
Confidence            99999999985320                00123456788899999999999999999999999888789999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.++...|+++|+
T Consensus       137 ~~~~~~~~~~Y~asK~  152 (244)
T 1zmo_A          137 GKKPLAYNPLYGPARA  152 (244)
T ss_dssp             GTSCCTTCTTHHHHHH
T ss_pred             hCCCCCCchHHHHHHH
Confidence            9999999999999985

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.95  E-value=6.3e-29  Score=200.92  Aligned_cols=153  Identities=18%  Similarity=0.147  Sum_probs=129.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEE-eeCh-------------hHHHHHHHHHhhcCCCceeEEEeecCChhhHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLT-ARDE-------------KRGLEAVEKLKHSGFDSVIFHQLDVADPATIH   65 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~-~r~~-------------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~   65 (174)
                      ++|||||++|||.++|++|+++|++ |+++ +|+.             +..++..+++.+.+ .++.++.+|++|.++++
T Consensus       253 ~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~v~~~~~Dvtd~~~v~  331 (525)
T 3qp9_A          253 TVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLG-ATATVVTCDLTDAEAAA  331 (525)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHT-CEEEEEECCTTSHHHHH
T ss_pred             EEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcC-CEEEEEECCCCCHHHHH
Confidence            5899999999999999999999997 7777 8873             44556667777665 45999999999999999


Q ss_pred             HHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC
Q 035504           66 SLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS  145 (174)
Q Consensus        66 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~  145 (174)
                      ++++++. ++++||+||||||+...                   ..+.+.+.++++++|++|+.|++++.+.+.+.|+++
T Consensus       332 ~~~~~i~-~~g~id~vVh~AGv~~~-------------------~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~  391 (525)
T 3qp9_A          332 RLLAGVS-DAHPLSAVLHLPPTVDS-------------------EPLAATDADALARVVTAKATAALHLDRLLREAAAAG  391 (525)
T ss_dssp             HHHHTSC-TTSCEEEEEECCCCCCC-------------------CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred             HHHHHHH-hcCCCcEEEECCcCCCC-------------------CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence            9999998 79999999999998543                   134566889999999999999999999999999887


Q ss_pred             C-CCeEEEEecCCCcccCCCCcceeeeccC
Q 035504          146 D-LPRIVNVSSNMGKLKNTWQGAICYLTFL  174 (174)
Q Consensus       146 ~-~g~iv~isS~~~~~~~~~~~~y~~~k~~  174 (174)
                      + .++||++||+++..+.+++..|+++|.|
T Consensus       392 ~~~~~iV~~SS~a~~~g~~g~~~YaaaKa~  421 (525)
T 3qp9_A          392 GRPPVLVLFSSVAAIWGGAGQGAYAAGTAF  421 (525)
T ss_dssp             -CCCEEEEEEEGGGTTCCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCHHHcCCCCCCHHHHHHHHH
Confidence            6 7999999999999999999999999964

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.95  E-value=1.7e-28  Score=181.77  Aligned_cols=144  Identities=24%  Similarity=0.273  Sum_probs=121.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCCh-hhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADP-ATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~g~   77 (174)
                      +++||||++|||++++++|+++|++ |++++|+.+.  +..+++.+.. +.++.++.+|++|+ ++++++++++.+++++
T Consensus         7 ~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   84 (254)
T 1sby_A            7 NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKT   84 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCC
Confidence            4899999999999999999999996 9999997632  2233343332 34688999999998 9999999999999999


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC---CCeEEEEe
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD---LPRIVNVS  154 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~is  154 (174)
                      +|+||||||...                           .+++++.+++|+.++++++++++|.|.+++   .|+||++|
T Consensus        85 id~lv~~Ag~~~---------------------------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~is  137 (254)
T 1sby_A           85 VDILINGAGILD---------------------------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC  137 (254)
T ss_dssp             CCEEEECCCCCC---------------------------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             CCEEEECCccCC---------------------------HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence            999999999731                           133566799999999999999999997764   58999999


Q ss_pred             cCCCcccCCCCcceeeecc
Q 035504          155 SNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~~~~~~~~~~y~~~k~  173 (174)
                      |..+..+.++...|+++|+
T Consensus       138 S~~~~~~~~~~~~Y~~sK~  156 (254)
T 1sby_A          138 SVTGFNAIHQVPVYSASKA  156 (254)
T ss_dssp             CGGGTSCCTTSHHHHHHHH
T ss_pred             chhhccCCCCchHHHHHHH
Confidence            9999999899999999985

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.95  E-value=4.3e-29  Score=205.31  Aligned_cols=150  Identities=25%  Similarity=0.288  Sum_probs=119.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee---------ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR---------DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      ++|||||++|||+++|++|+++|++|++++|         +.+..++..+++...++.    ..+|++|.++++++++++
T Consensus        21 ~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~D~~d~~~~~~~~~~~   96 (613)
T 3oml_A           21 VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE----AVADYNSVIDGAKVIETA   96 (613)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC----EEECCCCGGGHHHHHC--
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe----EEEEeCCHHHHHHHHHHH
Confidence            5899999999999999999999999999987         555566677777765543    248999999999999999


Q ss_pred             HhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEE
Q 035504           72 RSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIV  151 (174)
Q Consensus        72 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv  151 (174)
                      .+++|++|+||||||+....                   .+.+.+.++|++++++|+.|+++++++++|+|++++.|+||
T Consensus        97 ~~~~g~iDiLVnnAGi~~~~-------------------~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV  157 (613)
T 3oml_A           97 IKAFGRVDILVNNAGILRDR-------------------SLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRII  157 (613)
T ss_dssp             --------CEECCCCCCCCC-------------------CSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             HHHCCCCcEEEECCCCCCCC-------------------CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence            99999999999999985431                   24566888999999999999999999999999999889999


Q ss_pred             EEecCCCcccCCCCcceeeecc
Q 035504          152 NVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       152 ~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      ++||.++..+.++...|+++|+
T Consensus       158 ~isS~a~~~~~~~~~~Y~asKa  179 (613)
T 3oml_A          158 MTSSNSGIYGNFGQVNYTAAKM  179 (613)
T ss_dssp             EECCHHHHHCCTTCHHHHHHHH
T ss_pred             EECCHHHcCCCCCChHHHHHHH
Confidence            9999999999999999999985

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.95  E-value=5.6e-28  Score=180.54  Aligned_cols=152  Identities=20%  Similarity=0.243  Sum_probs=125.3

Q ss_pred             CEEEecC--CCchhHHHHHHHHHCCCeEEEEeeChhHH-HHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC-
Q 035504            1 YAVVTGA--NKGIGYETVRQLASNGIIVVLTARDEKRG-LEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG-   76 (174)
Q Consensus         1 ~~litGa--~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g-   76 (174)
                      ++|||||  ++|||++++++|+++|++|++++|+.+.. ++..++    .+.++.++.+|++|+++++++++++.+++| 
T Consensus         9 ~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            9 RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR----LPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT----SSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             EEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh----cCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4899999  99999999999999999999999986542 333222    234588899999999999999999999999 


Q ss_pred             --CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEe
Q 035504           77 --KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVS  154 (174)
Q Consensus        77 --~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~is  154 (174)
                        ++|+||||||+..+..              ....++.+.+.++|++.+++|+.++++++++++|+|+++  |+||++|
T Consensus        85 ~~~iD~lv~nAg~~~~~~--------------~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~is  148 (269)
T 2h7i_A           85 GNKLDGVVHSIGFMPQTG--------------MGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--GSIVGMD  148 (269)
T ss_dssp             TCCEEEEEECCCCCCGGG--------------STTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEE
T ss_pred             CCCceEEEECCccCcccc--------------ccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--CeEEEEc
Confidence              9999999999853210              001234566888999999999999999999999999753  8999999


Q ss_pred             cCCCcccCCCCcceeeecc
Q 035504          155 SNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~~~~~~~~~~y~~~k~  173 (174)
                      |..+ .+.+....|+++|+
T Consensus       149 s~~~-~~~~~~~~Y~asKa  166 (269)
T 2h7i_A          149 FDPS-RAMPAYNWMTVAKS  166 (269)
T ss_dssp             CCCS-SCCTTTHHHHHHHH
T ss_pred             Cccc-cccCchHHHHHHHH
Confidence            9876 67778889999885

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.95  E-value=9.2e-29  Score=193.21  Aligned_cols=171  Identities=14%  Similarity=0.016  Sum_probs=129.9

Q ss_pred             CEEEecCCCchhHHHHHHHHH-CCCeEEEEeeChhHHHH------------HHHHHhhcCCCceeEEEeecCChhhHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLAS-NGIIVVLTARDEKRGLE------------AVEKLKHSGFDSVIFHQLDVADPATIHSL   67 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~------------~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~   67 (174)
                      ++|||||++|||+++|++|++ +|++|++++|+.+..++            ..+++.+.+ .++..+.+|++|+++++++
T Consensus        63 vaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G-~~a~~i~~Dvtd~~~v~~~  141 (422)
T 3s8m_A           63 KVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG-LYSKSINGDAFSDAARAQV  141 (422)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTT-CCEEEEESCTTSHHHHHHH
T ss_pred             EEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcC-CcEEEEEecCCCHHHHHHH
Confidence            489999999999999999999 99999999987543221            224444444 4588999999999999999


Q ss_pred             HHHHHhhc-CCccEEEecccccCcc------------CCC-CCccccccCCCCcccccc--cccCHHHHHHhhHhhhhhH
Q 035504           68 ADFVRSQF-GKLDILVNNAAIFGVS------------VDG-DALSGFVKDGEPIKWNEI--VTPTYELAEKCLRTNYYGS  131 (174)
Q Consensus        68 ~~~~~~~~-g~id~li~~ag~~~~~------------~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~n~~~~  131 (174)
                      ++++.+++ |+||+||||||.....            .+. +.......+.+.+.|...  .+.+.++|++.+++|..+.
T Consensus       142 v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~  221 (422)
T 3s8m_A          142 IELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQD  221 (422)
T ss_dssp             HHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred             HHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhH
Confidence            99999999 9999999999973110            000 000111223344445443  4679999999999999999


Q ss_pred             H-HHHHhhhhh-ccCCCCCeEEEEecCCCcccCCCC--cceeeecc
Q 035504          132 K-RMCEVLIPL-LQLSDLPRIVNVSSNMGKLKNTWQ--GAICYLTF  173 (174)
Q Consensus       132 ~-~l~~~~~~~-m~~~~~g~iv~isS~~~~~~~~~~--~~y~~~k~  173 (174)
                      + ++++++++. |.+ +.|+||++||+.+..+.|..  +.|+++|+
T Consensus       222 ~~~~~~a~~~~~m~~-~gG~IVniSSi~g~~~~p~~~~~aY~ASKa  266 (422)
T 3s8m_A          222 WELWIDALEGAGVLA-DGARSVAFSYIGTEITWPIYWHGALGKAKV  266 (422)
T ss_dssp             HHHHHHHHHHTTCEE-EEEEEEEEEECCCGGGHHHHTSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhh-CCCEEEEEeCchhhccCCCccchHHHHHHH
Confidence            7 888887654 544 35999999999999887765  89999985

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.95  E-value=6.3e-29  Score=190.69  Aligned_cols=154  Identities=12%  Similarity=0.253  Sum_probs=124.1

Q ss_pred             CEEEecCCC--chhHHHHHHHHHCCCeEEEEeeChhH--HHHHHH-------HHhhcC--CCceeEEEeecCCh--h---
Q 035504            1 YAVVTGANK--GIGYETVRQLASNGIIVVLTARDEKR--GLEAVE-------KLKHSG--FDSVIFHQLDVADP--A---   62 (174)
Q Consensus         1 ~~litGa~~--giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~-------~l~~~~--~~~~~~~~~Dv~~~--~---   62 (174)
                      ++|||||++  |||+++|++|+++|++|+++++++..  .....+       ......  ...+.++.+|+++.  +   
T Consensus         4 ~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~   83 (329)
T 3lt0_A            4 ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDID   83 (329)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGCC
T ss_pred             EEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhhh
Confidence            589999986  99999999999999999988876521  111111       111111  12367888999888  7   


Q ss_pred             ---------------hHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhh
Q 035504           63 ---------------TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTN  127 (174)
Q Consensus        63 ---------------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n  127 (174)
                                     +++++++++.+++|++|+||||||+....                 ..++.+.+.++|+++|++|
T Consensus        84 ~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~-----------------~~~~~~~~~~~~~~~~~vN  146 (329)
T 3lt0_A           84 EETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEV-----------------QKDLLNTSRKGYLDALSKS  146 (329)
T ss_dssp             HHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTT-----------------TSCGGGCCHHHHHHHHHHH
T ss_pred             hhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccC-----------------CCCcccCCHHHHHHHHHHH
Confidence                           99999999999999999999999974211                 1234567889999999999


Q ss_pred             hhhHHHHHHhhhhhccCCCCCeEEEEecCCCcccCCCCc-ceeeecc
Q 035504          128 YYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQG-AICYLTF  173 (174)
Q Consensus       128 ~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~-~y~~~k~  173 (174)
                      +.|+++++++++|+|+++  |+||++||..+..+.|+.. .|+++|+
T Consensus       147 ~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKa  191 (329)
T 3lt0_A          147 SYSLISLCKYFVNIMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKA  191 (329)
T ss_dssp             THHHHHHHHHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhC--CeEEEEeCccccCCCCcchHHHHHHHH
Confidence            999999999999999876  8999999999999999986 9999985

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.95  E-value=5.4e-28  Score=187.46  Aligned_cols=171  Identities=12%  Similarity=-0.010  Sum_probs=127.7

Q ss_pred             CEEEecCCCchhHHHHHHHHH-CCCeEEEEeeChhHHH-----------H-HHHHHhhcCCCceeEEEeecCChhhHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLAS-NGIIVVLTARDEKRGL-----------E-AVEKLKHSGFDSVIFHQLDVADPATIHSL   67 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~-----------~-~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~   67 (174)
                      ++|||||++|||+++|+.|++ +|++|++++++.+...           + ..+++.+.+ .++..+.+|++|+++++++
T Consensus        49 vaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G-~~a~~i~~Dvtd~~~v~~~  127 (405)
T 3zu3_A           49 RVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKG-LYAKSINGDAFSDEIKQLT  127 (405)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTT-CCEEEEESCTTSHHHHHHH
T ss_pred             EEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcC-CceEEEECCCCCHHHHHHH
Confidence            489999999999999999999 9999999988654321           1 223444444 4588999999999999999


Q ss_pred             HHHHHhhcCCccEEEecccccCccCC--C-----------CCccccccCCCCcccc--cccccCHHHHHHhhHhhhhhHH
Q 035504           68 ADFVRSQFGKLDILVNNAAIFGVSVD--G-----------DALSGFVKDGEPIKWN--EIVTPTYELAEKCLRTNYYGSK  132 (174)
Q Consensus        68 ~~~~~~~~g~id~li~~ag~~~~~~~--~-----------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~n~~~~~  132 (174)
                      ++++.+++|++|+||||||......+  .           +.......+...+.+.  .+.+.+.++|++.+++|..+.+
T Consensus       128 v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~  207 (405)
T 3zu3_A          128 IDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDW  207 (405)
T ss_dssp             HHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHH
Confidence            99999999999999999997421100  0           0000000111111121  2356799999999999999998


Q ss_pred             -HHHHhhhh-hccCCCCCeEEEEecCCCcccCCCC--cceeeecc
Q 035504          133 -RMCEVLIP-LLQLSDLPRIVNVSSNMGKLKNTWQ--GAICYLTF  173 (174)
Q Consensus       133 -~l~~~~~~-~m~~~~~g~iv~isS~~~~~~~~~~--~~y~~~k~  173 (174)
                       ++++++.+ .|.+. .|+||++||+.+..+.|..  +.|+++|.
T Consensus       208 ~~~~~~~~~~~m~~~-gG~IVniSSi~~~~~~p~~~~~aY~AaKa  251 (405)
T 3zu3_A          208 QMWIDALLDAGVLAE-GAQTTAFTYLGEKITHDIYWNGSIGAAKK  251 (405)
T ss_dssp             HHHHHHHHHHTCEEE-EEEEEEEECCCCGGGTTTTTTSHHHHHHH
T ss_pred             HHHHHHHHHHhhhhC-CcEEEEEeCchhhCcCCCccchHHHHHHH
Confidence             78888765 45544 5999999999999988877  99999984

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=4.4e-28  Score=178.47  Aligned_cols=151  Identities=26%  Similarity=0.323  Sum_probs=127.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC--
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG--   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g--   76 (174)
                      ++|||||++|||++++++|+++|  ++|++++|+.+..++. +++   .+.++.++.+|++|+++++++++++.++++  
T Consensus         5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l-~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-KSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH-HTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH-Hhc---cCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            48999999999999999999999  9999999987665433 222   234689999999999999999999999998  


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC------C----
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS------D----  146 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~----  146 (174)
                      ++|++|||||...+.                  ..+.+.+.+++++.+++|+.++++++++++|.|+++      +    
T Consensus        81 ~id~li~~Ag~~~~~------------------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  142 (250)
T 1yo6_A           81 GLSLLINNAGVLLSY------------------GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSV  142 (250)
T ss_dssp             CCCEEEECCCCCCCB------------------CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCT
T ss_pred             CCcEEEECCcccCCC------------------cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccC
Confidence            999999999985411                  123455778899999999999999999999999776      4    


Q ss_pred             -CCeEEEEecCCCcccC-------CCCcceeeecc
Q 035504          147 -LPRIVNVSSNMGKLKN-------TWQGAICYLTF  173 (174)
Q Consensus       147 -~g~iv~isS~~~~~~~-------~~~~~y~~~k~  173 (174)
                       .++||++||..+..+.       ++...|+.+|.
T Consensus       143 ~~~~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~  177 (250)
T 1yo6_A          143 SRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA  177 (250)
T ss_dssp             TTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHH
T ss_pred             CCcEEEEeccCccccCCcccccccCCccHHHHHHH
Confidence             6999999999988776       56788988885

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.95  E-value=7.7e-28  Score=177.07  Aligned_cols=145  Identities=26%  Similarity=0.266  Sum_probs=123.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++.     +..++.+|++|+++++++++    .++++|+
T Consensus         9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~----~~~~id~   79 (244)
T 3d3w_A            9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERALG----SVGPVDL   79 (244)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHT----TCCCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-----CCCEEEEeCCCHHHHHHHHH----HcCCCCE
Confidence            48999999999999999999999999999998766555544431     35677999999999888775    6789999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      +|||||....                   .+..+.+.+++++.+++|+.++++++++++|.|++++ .|+||++||..+.
T Consensus        80 vi~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  140 (244)
T 3d3w_A           80 LVNNAAVALL-------------------QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ  140 (244)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             EEECCccCCC-------------------cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhc
Confidence            9999997432                   1234557788999999999999999999999998766 6999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       141 ~~~~~~~~Y~~sK~  154 (244)
T 3d3w_A          141 RAVTNHSVYCSTKG  154 (244)
T ss_dssp             SCCTTBHHHHHHHH
T ss_pred             cCCCCCchHHHHHH
Confidence            88888899999985

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.95  E-value=1.4e-28  Score=181.04  Aligned_cols=141  Identities=9%  Similarity=0.011  Sum_probs=122.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc--CCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF--GKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~--g~i   78 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+...           ....++.+|++|+++++++++++.+++  +++
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A            9 RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            4899999999999999999999999999999865321           135678899999999999999999999  799


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccc-cccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEI-VTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |+||||||.....                   ++ .+.+.+++++.+++|+.++++++++++|.|++  .|+||++||..
T Consensus        78 D~lv~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~  136 (241)
T 1dhr_A           78 DAILCVAGGWAGG-------------------NAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKA  136 (241)
T ss_dssp             EEEEECCCCCCCB-------------------CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGG
T ss_pred             CEEEEcccccCCC-------------------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHH
Confidence            9999999985421                   12 34567889999999999999999999999975  38999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.++...|+.+|+
T Consensus       137 ~~~~~~~~~~Y~asK~  152 (241)
T 1dhr_A          137 ALDGTPGMIGYGMAKG  152 (241)
T ss_dssp             GGSCCTTBHHHHHHHH
T ss_pred             HccCCCCchHHHHHHH
Confidence            9999899999999885

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.95  E-value=6e-28  Score=178.76  Aligned_cols=140  Identities=14%  Similarity=0.056  Sum_probs=122.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..             ....+.+|++|.++++++++++.++++++|+
T Consensus        24 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~   90 (251)
T 3orf_A           24 NILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN-------------ADHSFTIKDSGEEEIKSVIEKINSKSIKVDT   90 (251)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------SSEEEECSCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------cccceEEEeCCHHHHHHHHHHHHHHcCCCCE
Confidence            489999999999999999999999999999986531             1235788999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+.....                  ...+.+.+++++.+++|+.++++++++++|.|++  .|+||++||..+..
T Consensus        91 li~~Ag~~~~~~------------------~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~  150 (251)
T 3orf_A           91 FVCAAGGWSGGN------------------ASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALN  150 (251)
T ss_dssp             EEECCCCCCCBC------------------TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGS
T ss_pred             EEECCccCCCCC------------------cccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhcc
Confidence            999999854321                  1234567889999999999999999999999976  38999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       151 ~~~~~~~Y~~sKa  163 (251)
T 3orf_A          151 RTSGMIAYGATKA  163 (251)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCCchhHHHHH
Confidence            9999999999985

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.95  E-value=1.1e-27  Score=176.21  Aligned_cols=145  Identities=24%  Similarity=0.237  Sum_probs=122.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++     .++.++.+|++|+++++++++    .++++|+
T Consensus         9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~----~~~~id~   79 (244)
T 1cyd_A            9 RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----PGIEPVCVDLGDWDATEKALG----GIGPVDL   79 (244)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHT----TCCCCSE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCCcEEecCCCHHHHHHHHH----HcCCCCE
Confidence            4899999999999999999999999999999876655544432     236677999999999888776    6789999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      ||||||....                   .+..+.+.+++++.+++|+.++++++++++|.|++++ .|+||++||..+.
T Consensus        80 vi~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~  140 (244)
T 1cyd_A           80 LVNNAALVIM-------------------QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH  140 (244)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             EEECCcccCC-------------------CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhc
Confidence            9999997532                   1234567788999999999999999999999998766 6899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       141 ~~~~~~~~Y~~sK~  154 (244)
T 1cyd_A          141 VTFPNLITYSSTKG  154 (244)
T ss_dssp             SCCTTBHHHHHHHH
T ss_pred             CCCCCcchhHHHHH
Confidence            88888899999885

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=2.4e-28  Score=179.18  Aligned_cols=141  Identities=11%  Similarity=0.026  Sum_probs=122.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc--CCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF--GKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~--g~i   78 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+...           ....++.+|++|+++++++++++.+.+  +++
T Consensus         5 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            5 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            4899999999999999999999999999999865321           135677899999999999999999999  799


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccc-cccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEI-VTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |+||||||.....                   ++ .+.+.+++++.+++|+.++++++++++|.|++  .|+||++||..
T Consensus        74 d~lv~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~  132 (236)
T 1ooe_A           74 DGVFCVAGGWAGG-------------------SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAA  132 (236)
T ss_dssp             EEEEECCCCCCCB-------------------CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGG
T ss_pred             CEEEECCcccCCC-------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchh
Confidence            9999999975421                   12 34567889999999999999999999999975  38999999999


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.++...|+.+|+
T Consensus       133 ~~~~~~~~~~Y~~sK~  148 (236)
T 1ooe_A          133 AMGPTPSMIGYGMAKA  148 (236)
T ss_dssp             GGSCCTTBHHHHHHHH
T ss_pred             hccCCCCcHHHHHHHH
Confidence            9999899999999985

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.95  E-value=2.2e-27  Score=176.78  Aligned_cols=153  Identities=22%  Similarity=0.266  Sum_probs=127.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC---CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC-
Q 035504            1 YAVVTGANKGIGYETVRQLASNG---IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG-   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g-   76 (174)
                      ++|||||++|||++++++|+++|   ++|++++|+.+..+. .+++...+ .++.++.+|++|+++++++++++.+.++ 
T Consensus        23 ~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  100 (267)
T 1sny_A           23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNH-SNIHILEIDLRNFDAYDKLVADIEGVTKD  100 (267)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-HHHHHHHC-TTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             EEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-HHHhhccC-CceEEEEecCCChHHHHHHHHHHHHhcCC
Confidence            48999999999999999999999   999999998765443 34444443 3599999999999999999999999998 


Q ss_pred             -CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC------C---
Q 035504           77 -KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS------D---  146 (174)
Q Consensus        77 -~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~---  146 (174)
                       ++|+||||||.....                  ..+.+.+.+++++.+++|+.++++++++++|.|+++      +   
T Consensus       101 ~~id~li~~Ag~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~  162 (267)
T 1sny_A          101 QGLNVLFNNAGIAPKS------------------ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMG  162 (267)
T ss_dssp             GCCSEEEECCCCCCCC------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSS
T ss_pred             CCccEEEECCCcCCCc------------------cccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhccccccccccc
Confidence             899999999985411                  223456788999999999999999999999999765      3   


Q ss_pred             --CCeEEEEecCCCcccCC---CCcceeeecc
Q 035504          147 --LPRIVNVSSNMGKLKNT---WQGAICYLTF  173 (174)
Q Consensus       147 --~g~iv~isS~~~~~~~~---~~~~y~~~k~  173 (174)
                        .++||++||..+..+.+   +...|+.+|.
T Consensus       163 ~~~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~  194 (267)
T 1sny_A          163 VGRAAIINMSSILGSIQGNTDGGMYAYRTSKS  194 (267)
T ss_dssp             TTTCEEEEECCGGGCSTTCCSCCCHHHHHHHH
T ss_pred             CCCceEEEEecccccccCCCCCCchHHHHHHH
Confidence              58999999999887653   6678988885

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.95  E-value=7.8e-28  Score=177.37  Aligned_cols=139  Identities=22%  Similarity=0.172  Sum_probs=119.7

Q ss_pred             CEEEecCCCchhHHHHHHHHH-CCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLAS-NGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|++ .|++|++++|+.+.           ....+.++.+|++|+++++++++.+ + ++++|
T Consensus         6 ~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-----------~~~~~~~~~~Dv~~~~~v~~~~~~~-~-~~~id   72 (244)
T 4e4y_A            6 NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-----------SAENLKFIKADLTKQQDITNVLDII-K-NVSFD   72 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-----------CCTTEEEEECCTTCHHHHHHHHHHT-T-TCCEE
T ss_pred             eEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-----------ccccceEEecCcCCHHHHHHHHHHH-H-hCCCC
Confidence            489999999999999999999 78899999887541           1134789999999999999999554 3 78999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||+....                   +..+.+.++|++.+++|+.++++++++++|.|+++  |+||++||..+.
T Consensus        73 ~lv~nAg~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~  131 (244)
T 4e4y_A           73 GIFLNAGILIKG-------------------SIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCF  131 (244)
T ss_dssp             EEEECCCCCCCB-------------------CTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGT
T ss_pred             EEEECCccCCCC-------------------CcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHc
Confidence            999999985431                   24466889999999999999999999999999765  899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+.+|+
T Consensus       132 ~~~~~~~~Y~asKa  145 (244)
T 4e4y_A          132 IAKPNSFAYTLSKG  145 (244)
T ss_dssp             CCCTTBHHHHHHHH
T ss_pred             cCCCCCchhHHHHH
Confidence            99999999999985

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.94  E-value=1.9e-27  Score=179.53  Aligned_cols=140  Identities=32%  Similarity=0.395  Sum_probs=114.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|++|.++++++++++    +++|+
T Consensus        18 ~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~v~~~~~~~----~~iD~   89 (291)
T 3rd5_A           18 TVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----AGQVEVRELDLQDLSSVRRFADGV----SGADV   89 (291)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS----SSEEEEEECCTTCHHHHHHHHHTC----CCEEE
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----cCCeeEEEcCCCCHHHHHHHHHhc----CCCCE
Confidence            4899999999999999999999999999999987666655544    346999999999999999888765    78999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+..+.          .+           .+.+++++++++|+.|+++++++++|.|++    +||++||..+..
T Consensus        90 lv~nAg~~~~~----------~~-----------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~  144 (291)
T 3rd5_A           90 LINNAGIMAVP----------YA-----------LTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWP  144 (291)
T ss_dssp             EEECCCCCSCC----------CC-----------BCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTT
T ss_pred             EEECCcCCCCc----------cc-----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhcc
Confidence            99999985421          11           233445566999999999999999999974    899999998876


Q ss_pred             cC-------------CCCcceeeecc
Q 035504          161 KN-------------TWQGAICYLTF  173 (174)
Q Consensus       161 ~~-------------~~~~~y~~~k~  173 (174)
                      +.             ++...|+.+|+
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~Y~~sK~  170 (291)
T 3rd5_A          145 GRINLEDLNWRSRRYSPWLAYSQSKL  170 (291)
T ss_dssp             CCCCSSCTTCSSSCCCHHHHHHHHHH
T ss_pred             CCCCcccccccccCCCCcchHHHHHH
Confidence            52             34567888885

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.94  E-value=2e-27  Score=173.03  Aligned_cols=128  Identities=21%  Similarity=0.259  Sum_probs=113.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+                     +|++|+++++++++++    +++|+
T Consensus         8 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------~D~~~~~~v~~~~~~~----g~id~   62 (223)
T 3uce_A            8 VYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------LDISDEKSVYHYFETI----GAFDH   62 (223)
T ss_dssp             EEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------CCTTCHHHHHHHHHHH----CSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------cCCCCHHHHHHHHHHh----CCCCE
Confidence            4899999999999999999999999999998753                     8999999999888754    89999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||...+.                  .+..+.+.+++++.+++|+.++++++++++|.|++  .|+||++||..+..
T Consensus        63 lv~nAg~~~~~------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~  122 (223)
T 3uce_A           63 LIVTAGSYAPA------------------GKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRK  122 (223)
T ss_dssp             EEECCCCCCCC------------------SCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTS
T ss_pred             EEECCCCCCCC------------------CCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhcc
Confidence            99999985321                  23456688899999999999999999999999976  38999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       123 ~~~~~~~Y~asK~  135 (223)
T 3uce_A          123 VVANTYVKAAINA  135 (223)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCchHHHHHHH
Confidence            9999999999985

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.94  E-value=6e-27  Score=174.61  Aligned_cols=137  Identities=45%  Similarity=0.633  Sum_probs=117.8

Q ss_pred             CEEEecCCCchhHHHHHHHHH-CCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLAS-NGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||++++++|++ +|++|++++|+.+...+..+++...+ .++.++.+|++|.++++++++++.++++++|
T Consensus         6 ~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (276)
T 1wma_A            6 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   84 (276)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            489999999999999999999 99999999999877777777776654 4588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccC-HHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPT-YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      +||||||......                    .+.+ .+++++.+++|+.++++++++++|.|++  .|+||++||..+
T Consensus        85 ~li~~Ag~~~~~~--------------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~  142 (276)
T 1wma_A           85 VLVNNAGIAFKVA--------------------DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMS  142 (276)
T ss_dssp             EEEECCCCCCCTT--------------------CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHH
T ss_pred             EEEECCcccccCC--------------------CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhh
Confidence            9999999753210                    1112 4778899999999999999999999975  389999999877


Q ss_pred             cc
Q 035504          159 KL  160 (174)
Q Consensus       159 ~~  160 (174)
                      ..
T Consensus       143 ~~  144 (276)
T 1wma_A          143 VR  144 (276)
T ss_dssp             HH
T ss_pred             hc
Confidence            63

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.94  E-value=9.8e-28  Score=176.87  Aligned_cols=145  Identities=21%  Similarity=0.201  Sum_probs=107.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|++ |++|++++|+.+..++..+ +     .++.++.+|++++++ .+.+.+..+.++++|+
T Consensus         7 ~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~-----~~~~~~~~D~~~~~~-~~~~~~~~~~~~~id~   78 (245)
T 3e9n_A            7 IAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-I-----EGVEPIESDIVKEVL-EEGGVDKLKNLDHVDT   78 (245)
T ss_dssp             EEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-S-----TTEEEEECCHHHHHH-TSSSCGGGTTCSCCSE
T ss_pred             EEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-h-----cCCcceecccchHHH-HHHHHHHHHhcCCCCE
Confidence            489999999999999999988 9999999998765544332 1     348899999998876 4455556677899999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+....                   ...+.+.+++++.+++|+.++++++++++|.|++++ |+||++||..+..
T Consensus        79 lv~~Ag~~~~~-------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~  138 (245)
T 3e9n_A           79 LVHAAAVARDT-------------------TIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNG  138 (245)
T ss_dssp             EEECC-----------------------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC------
T ss_pred             EEECCCcCCCC-------------------chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCccccc
Confidence            99999985431                   234557888999999999999999999999998766 9999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       139 ~~~~~~~Y~asK~  151 (245)
T 3e9n_A          139 PHPGNTIYAASKH  151 (245)
T ss_dssp             ----CHHHHHHHH
T ss_pred             CCCCchHHHHHHH
Confidence            9999999999985

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.94  E-value=1.2e-26  Score=171.57  Aligned_cols=138  Identities=20%  Similarity=0.185  Sum_probs=115.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+.    .+++   +  ++.++ +|+  .++++++++++.    ++|+
T Consensus        21 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~----~~~~---~--~~~~~-~D~--~~~~~~~~~~~~----~iD~   84 (249)
T 1o5i_A           21 GVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL----LKRS---G--HRYVV-CDL--RKDLDLLFEKVK----EVDI   84 (249)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHT---C--SEEEE-CCT--TTCHHHHHHHSC----CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH----HHhh---C--CeEEE-eeH--HHHHHHHHHHhc----CCCE
Confidence            48999999999999999999999999999998632    2222   2  46677 999  567777776553    8999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   ..+.+.+.+++++.+++|+.++++++++++|.|++++.|+||++||..+..
T Consensus        85 lv~~Ag~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  145 (249)
T 1o5i_A           85 LVLNAGGPKA-------------------GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS  145 (249)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC
Confidence            9999997432                   123456788899999999999999999999999888789999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|+
T Consensus       146 ~~~~~~~Y~~sK~  158 (249)
T 1o5i_A          146 PIENLYTSNSARM  158 (249)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCCCCchHHHHHH
Confidence            8888899999885

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.94  E-value=9e-27  Score=186.81  Aligned_cols=150  Identities=23%  Similarity=0.251  Sum_probs=127.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChh---HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEK---RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||++|||.+++++|+++|+ +|++++|+..   ...+..+++...+ .++.++.||++|.++++++++++.+. +
T Consensus       241 ~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g-~~v~~~~~Dvtd~~~v~~~~~~i~~~-g  318 (496)
T 3mje_A          241 SVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLG-VRVTIAACDAADREALAALLAELPED-A  318 (496)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHTCCTT-S
T ss_pred             EEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHh-C
Confidence            589999999999999999999999 7899999643   3456666776655 46999999999999999999998777 7


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|+||||||+....                  ..+.+.+.++++++|++|+.|++++.+.+.+.    +.++||++||+
T Consensus       319 ~ld~vVh~AGv~~~~------------------~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~  376 (496)
T 3mje_A          319 PLTAVFHSAGVAHDD------------------APVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSG  376 (496)
T ss_dssp             CEEEEEECCCCCCSC------------------CCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEH
T ss_pred             CCeEEEECCcccCCC------------------CCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeCh
Confidence            999999999985211                  12456688899999999999999999988554    45899999999


Q ss_pred             CCcccCCCCcceeeeccC
Q 035504          157 MGKLKNTWQGAICYLTFL  174 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~~  174 (174)
                      ++..+.+++..|+++|.|
T Consensus       377 a~~~g~~g~~~YaAaKa~  394 (496)
T 3mje_A          377 AAVWGSGGQPGYAAANAY  394 (496)
T ss_dssp             HHHTTCTTCHHHHHHHHH
T ss_pred             HhcCCCCCcHHHHHHHHH
Confidence            999999999999999974

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.94  E-value=2.6e-26  Score=175.37  Aligned_cols=154  Identities=18%  Similarity=0.196  Sum_probs=100.8

Q ss_pred             CEEEecC--CCchhHHHHHHHHHCCCeEEEEeeCh-----------hHHH-----------HHHHHHhhcCCC--ceeEE
Q 035504            1 YAVVTGA--NKGIGYETVRQLASNGIIVVLTARDE-----------KRGL-----------EAVEKLKHSGFD--SVIFH   54 (174)
Q Consensus         1 ~~litGa--~~giG~~~a~~l~~~g~~v~~~~r~~-----------~~~~-----------~~~~~l~~~~~~--~~~~~   54 (174)
                      ++|||||  ++|||+++|++|+++|++|++++|++           +...           +..+++.+.+..  ...++
T Consensus        11 ~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (319)
T 2ptg_A           11 TAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIY   90 (319)
T ss_dssp             EEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEEE
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccccc
Confidence            4899999  89999999999999999999998752           1111           122233222210  12333


Q ss_pred             Ee------------ecCC--------hhhHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccc
Q 035504           55 QL------------DVAD--------PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT  114 (174)
Q Consensus        55 ~~------------Dv~~--------~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (174)
                      .+            |++|        +++++++++++.+++|++|+||||||+....                 ..++.+
T Consensus        91 ~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~-----------------~~~~~~  153 (319)
T 2ptg_A           91 PLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEV-----------------TKPLLQ  153 (319)
T ss_dssp             ECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSS-----------------SSCGGG
T ss_pred             cccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCC-----------------CCcccc
Confidence            33            3444        5689999999999999999999999974210                 123456


Q ss_pred             cCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcccCCCC-cceeeecc
Q 035504          115 PTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ-GAICYLTF  173 (174)
Q Consensus       115 ~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-~~y~~~k~  173 (174)
                      .+.++|++.|++|+.++++++++++|+|++.  |+||++||..+..+.|+. ..|+++|+
T Consensus       154 ~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKa  211 (319)
T 2ptg_A          154 TSRKGYLAAVSSSSYSFVSLLQHFLPLMKEG--GSALALSYIASEKVIPGYGGGMSSAKA  211 (319)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEEECC-----------------
T ss_pred             CCHHHHHHHHhHhhHHHHHHHHHHHHHHhcC--ceEEEEeccccccccCccchhhHHHHH
Confidence            6888999999999999999999999999763  899999999999888887 69999996

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.93  E-value=3.9e-26  Score=179.28  Aligned_cols=173  Identities=15%  Similarity=0.092  Sum_probs=127.0

Q ss_pred             CEEEecCCCchhHH--HHHHHHHCCCeEEEEeeChhHH-----------HHHHHHHhhcCCCceeEEEeecCChhhHHHH
Q 035504            1 YAVVTGANKGIGYE--TVRQLASNGIIVVLTARDEKRG-----------LEAVEKLKHSGFDSVIFHQLDVADPATIHSL   67 (174)
Q Consensus         1 ~~litGa~~giG~~--~a~~l~~~g~~v~~~~r~~~~~-----------~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~   67 (174)
                      ++|||||++|||++  +++.|+++|++|++++|+....           .+..+++....+.++..+.+|++|+++++++
T Consensus        62 ~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~  141 (418)
T 4eue_A           62 KVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKV  141 (418)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHH
Confidence            48999999999999  9999999999999999864321           1223333223335689999999999999999


Q ss_pred             HHHHHhhcCCccEEEecccccCccCC--CCCcc-----------ccccCCCCcccc--cccccCHHHHHHhhHhhhhhHH
Q 035504           68 ADFVRSQFGKLDILVNNAAIFGVSVD--GDALS-----------GFVKDGEPIKWN--EIVTPTYELAEKCLRTNYYGSK  132 (174)
Q Consensus        68 ~~~~~~~~g~id~li~~ag~~~~~~~--~~~~~-----------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~n~~~~~  132 (174)
                      ++++.+++|+||+||||||......+  ...+.           ....+...+.|.  .+.+.+.++|+..+++|..+.+
T Consensus       142 v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~  221 (418)
T 4eue_A          142 IKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGEDW  221 (418)
T ss_dssp             HHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHHHH
Confidence            99999999999999999998521100  00000           000111111221  1245789999999999999988


Q ss_pred             -HHHHhhhhhccCCCCCeEEEEecCCCcccCCCC--cceeeecc
Q 035504          133 -RMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ--GAICYLTF  173 (174)
Q Consensus       133 -~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--~~y~~~k~  173 (174)
                       .+++++++.+..++.|+||++||+.+..+.|..  +.|+++|+
T Consensus       222 ~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKa  265 (418)
T 4eue_A          222 QEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKK  265 (418)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHH
Confidence             778887765433445999999999999988877  99999984

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.93  E-value=6.2e-27  Score=197.08  Aligned_cols=147  Identities=26%  Similarity=0.335  Sum_probs=129.1

Q ss_pred             CEEEecCCCchhHHHHHHHH-HCCCe-EEEEeeC---hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLA-SNGII-VVLTARD---EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~-~~g~~-v~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      ++|||||++|||+++|++|+ ++|++ |++++|+   .+..++..+++.+.+ .++.++.||++|+++++++++++.+.+
T Consensus       532 ~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G-~~v~~~~~Dvsd~~~v~~~~~~~~~~~  610 (795)
T 3slk_A          532 TVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYG-AEVSLQACDVADRETLAKVLASIPDEH  610 (795)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             ceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcC-CcEEEEEeecCCHHHHHHHHHHHHHhC
Confidence            48999999999999999999 79995 9999998   344667777777665 459999999999999999999998877


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS  155 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS  155 (174)
                       +||++|||||+...                   ..+.+++.++|+++|++|+.|++++.+++.|.|      +||++||
T Consensus       611 -~id~lVnnAGv~~~-------------------~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS  664 (795)
T 3slk_A          611 -PLTAVVHAAGVLDD-------------------GVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSS  664 (795)
T ss_dssp             -CEEEEEECCCCCCC-------------------CCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEE
T ss_pred             -CCEEEEECCCcCCC-------------------CchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEcc
Confidence             99999999998543                   134567889999999999999999999998887      8999999


Q ss_pred             CCCcccCCCCcceeeeccC
Q 035504          156 NMGKLKNTWQGAICYLTFL  174 (174)
Q Consensus       156 ~~~~~~~~~~~~y~~~k~~  174 (174)
                      +++..+.+++..|+++|.|
T Consensus       665 ~ag~~g~~g~~~YaAaka~  683 (795)
T 3slk_A          665 VSGVLGSGGQGNYAAANSF  683 (795)
T ss_dssp             THHHHTCSSCHHHHHHHHH
T ss_pred             HHhcCCCCCCHHHHHHHHH
Confidence            9999999999999999965

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.93  E-value=4e-26  Score=174.08  Aligned_cols=154  Identities=19%  Similarity=0.146  Sum_probs=116.9

Q ss_pred             CEEEecC--CCchhHHHHHHHHHCCCeEEEEeeChhH------HH-HHHHHHhhc--CCC--ceeEEE------------
Q 035504            1 YAVVTGA--NKGIGYETVRQLASNGIIVVLTARDEKR------GL-EAVEKLKHS--GFD--SVIFHQ------------   55 (174)
Q Consensus         1 ~~litGa--~~giG~~~a~~l~~~g~~v~~~~r~~~~------~~-~~~~~l~~~--~~~--~~~~~~------------   55 (174)
                      ++|||||  ++|||+++|++|+++|++|++++|+...      .. +..+++.+.  +..  ...++.            
T Consensus        11 ~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   90 (315)
T 2o2s_A           11 TAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDVP   90 (315)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSSC
T ss_pred             EEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchhh
Confidence            4899999  8999999999999999999999876310      00 011111111  110  023333            


Q ss_pred             eecCC--------hhhHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhh
Q 035504           56 LDVAD--------PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTN  127 (174)
Q Consensus        56 ~Dv~~--------~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n  127 (174)
                      +|++|        +++++++++++.+++|++|+||||||+....                 ..++.+.+.++|++.|++|
T Consensus        91 ~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~-----------------~~~~~~~~~~~~~~~~~~N  153 (315)
T 2o2s_A           91 QDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEV-----------------TKPLLETSRKGYLAASSNS  153 (315)
T ss_dssp             HHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTT-----------------TSCGGGCCHHHHHHHHHHH
T ss_pred             hhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcC-----------------CCCcccCCHHHHHHHHhhh
Confidence            34443        7799999999999999999999999974310                 1234556788999999999


Q ss_pred             hhhHHHHHHhhhhhccCCCCCeEEEEecCCCcccCCCC-cceeeecc
Q 035504          128 YYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ-GAICYLTF  173 (174)
Q Consensus       128 ~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-~~y~~~k~  173 (174)
                      +.++++++++++|.|++.  |+||++||..+..+.++. ..|+++|+
T Consensus       154 ~~g~~~l~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKa  198 (315)
T 2o2s_A          154 AYSFVSLLQHFGPIMNEG--GSAVTLSYLAAERVVPGYGGGMSSAKA  198 (315)
T ss_dssp             THHHHHHHHHHSTTEEEE--EEEEEEEEGGGTSCCTTCCTTHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcC--CEEEEEecccccccCCCccHHHHHHHH
Confidence            999999999999999763  899999999999888887 58999985

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=2.3e-26  Score=168.68  Aligned_cols=144  Identities=19%  Similarity=0.133  Sum_probs=121.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+ .            .++.++.+|++|+++++++++++ ++++++|+
T Consensus         4 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~   69 (242)
T 1uay_A            4 SALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFA   69 (242)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEE
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceE
Confidence            4899999999999999999999999999999854 1            24688999999999999999999 88999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC---CC---eEEEEe
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD---LP---RIVNVS  154 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g---~iv~is  154 (174)
                      +|||||......        +.+.       ..+.+.+++++.+++|+.++++++++++|.|++++   .|   +||++|
T Consensus        70 li~~ag~~~~~~--------~~~~-------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~s  134 (242)
T 1uay_A           70 VVSAAGVGLAEK--------ILGK-------EGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTA  134 (242)
T ss_dssp             EEECCCCCCCCC--------SBCS-------SSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEEC
T ss_pred             EEEcccccCccc--------cccc-------ccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeC
Confidence            999999854321        1111       11235568899999999999999999999998765   33   999999


Q ss_pred             cCCCcccCCCCcceeeecc
Q 035504          155 SNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~~~~~~~~~~y~~~k~  173 (174)
                      |..+..+.++...|+.+|+
T Consensus       135 S~~~~~~~~~~~~Y~~sK~  153 (242)
T 1uay_A          135 SVAAFEGQIGQAAYAASKG  153 (242)
T ss_dssp             CTHHHHCCTTCHHHHHHHH
T ss_pred             ChhhccCCCCCchhhHHHH
Confidence            9999888888899999884

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.93  E-value=9.9e-26  Score=170.51  Aligned_cols=154  Identities=16%  Similarity=0.200  Sum_probs=116.3

Q ss_pred             CEEEecCC--CchhHHHHHHHHHCCCeEEEEeeChhHHH-------HHHHHHhhc--CC--CceeEEEe-----------
Q 035504            1 YAVVTGAN--KGIGYETVRQLASNGIIVVLTARDEKRGL-------EAVEKLKHS--GF--DSVIFHQL-----------   56 (174)
Q Consensus         1 ~~litGa~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~-------~~~~~l~~~--~~--~~~~~~~~-----------   56 (174)
                      ++|||||+  +|||+++|++|+++|++|++++|+.....       +..+++.+.  +.  .....+.+           
T Consensus        10 ~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~   89 (297)
T 1d7o_A           10 RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVP   89 (297)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSC
T ss_pred             EEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhhhh
Confidence            48999999  99999999999999999999997632110       001111111  10  00223333           


Q ss_pred             -ecCC--------hhhHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhh
Q 035504           57 -DVAD--------PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTN  127 (174)
Q Consensus        57 -Dv~~--------~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n  127 (174)
                       |++|        +++++++++++.+++|++|+||||||+....                 ..++.+.+.++|++.|++|
T Consensus        90 ~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~-----------------~~~~~~~~~~~~~~~~~vN  152 (297)
T 1d7o_A           90 EDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEV-----------------SKPLLETSRKGYLAAISAS  152 (297)
T ss_dssp             HHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTT-----------------TSCGGGCCHHHHHHHHHHH
T ss_pred             hhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccC-----------------CCCcccCCHHHHHHHHHHh
Confidence             3333        7799999999999999999999999974211                 1234556788999999999


Q ss_pred             hhhHHHHHHhhhhhccCCCCCeEEEEecCCCcccCCCC-cceeeecc
Q 035504          128 YYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ-GAICYLTF  173 (174)
Q Consensus       128 ~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-~~y~~~k~  173 (174)
                      +.++++++++++|.|++  .|+||++||..+..+.|+. ..|+++|+
T Consensus       153 ~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKa  197 (297)
T 1d7o_A          153 SYSFVSLLSHFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKA  197 (297)
T ss_dssp             THHHHHHHHHHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHH
T ss_pred             hhHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCcchHHHHHHH
Confidence            99999999999999975  3899999999999988887 69999985

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.92  E-value=3.7e-25  Score=195.76  Aligned_cols=153  Identities=23%  Similarity=0.285  Sum_probs=128.0

Q ss_pred             CEEEecCCCc-hhHHHHHHHHHCCCeEEEE-eeChhHHHHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhh-
Q 035504            1 YAVVTGANKG-IGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQ-   74 (174)
Q Consensus         1 ~~litGa~~g-iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-   74 (174)
                      ++|||||++| ||+++|++|+++|++|+++ .|+.+...+..+++.+.   .+.++.++.+|++|.++++++++++.++ 
T Consensus       677 vaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~  756 (1887)
T 2uv8_A          677 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTE  756 (1887)
T ss_dssp             EEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCT
T ss_pred             EEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4899999998 9999999999999999998 56666666666666332   1346899999999999999999999998 


Q ss_pred             ----cC-CccEEEecccccCccCCCCCccccccCCCCcccccccccC--HHHHHHhhHhhhhhHHHHHHhh--hhhccCC
Q 035504           75 ----FG-KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPT--YELAEKCLRTNYYGSKRMCEVL--IPLLQLS  145 (174)
Q Consensus        75 ----~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~m~~~  145 (174)
                          +| ++|+||||||+....                  ..+.+.+  .++|+++|++|+.+++.+++.+  +|.|+++
T Consensus       757 ~~~G~G~~LDiLVNNAGi~~~~------------------~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~  818 (1887)
T 2uv8_A          757 KNGGLGWDLDAIIPFAAIPEQG------------------IELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR  818 (1887)
T ss_dssp             TTTSCCCCCSEEEECCCCCCCS------------------BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSC
T ss_pred             cccccCCCCeEEEECCCcCCCC------------------CChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhC
Confidence                67 999999999985321                  0233445  7889999999999999999988  8999888


Q ss_pred             CCCeEEEEecCCCcccCCCCcceeeecc
Q 035504          146 DLPRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       146 ~~g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      +.|+||++||..+..+  +...|+++|+
T Consensus       819 ~~G~IVnISS~ag~~g--g~~aYaASKA  844 (1887)
T 2uv8_A          819 PAQVILPMSPNHGTFG--GDGMYSESKL  844 (1887)
T ss_dssp             CEEEEEEECSCTTCSS--CBTTHHHHHH
T ss_pred             CCCEEEEEcChHhccC--CCchHHHHHH
Confidence            7789999999999887  6789999985

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.92  E-value=9.6e-26  Score=194.88  Aligned_cols=153  Identities=23%  Similarity=0.279  Sum_probs=127.9

Q ss_pred             CEEEecCCCc-hhHHHHHHHHHCCCeEEEE-eeChhHHHHHHHHHhhcC---CCceeEEEeecCChhhHHHHHHHHHhh-
Q 035504            1 YAVVTGANKG-IGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSG---FDSVIFHQLDVADPATIHSLADFVRSQ-   74 (174)
Q Consensus         1 ~~litGa~~g-iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~-   74 (174)
                      ++|||||++| ||+++|++|+++|++|+++ +|+.+...+..+++.+..   +.++.++.+|++|+++++++++++.+. 
T Consensus       478 vALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~  557 (1688)
T 2pff_A          478 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTE  557 (1688)
T ss_dssp             CEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCT
T ss_pred             EEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhc
Confidence            5899999998 9999999999999999998 566555556666664332   346889999999999999999999998 


Q ss_pred             ----cC-CccEEEecccccCccCCCCCccccccCCCCcccccccccC--HHHHHHhhHhhhhhHHHHHHhh--hhhccCC
Q 035504           75 ----FG-KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPT--YELAEKCLRTNYYGSKRMCEVL--IPLLQLS  145 (174)
Q Consensus        75 ----~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~m~~~  145 (174)
                          +| ++|+||||||+....                  ..+.+.+  .++|+++|++|+.+++.+++.+  +|.|+++
T Consensus       558 ~~~GfG~~IDILVNNAGI~~~g------------------~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr  619 (1688)
T 2pff_A          558 KNGGLGWDLDAIIPFAAIPEQG------------------IELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR  619 (1688)
T ss_dssp             TSSSCCCCCCEEECCCCCCCCS------------------BCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS
T ss_pred             cccccCCCCeEEEECCCcCCCC------------------CChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC
Confidence                77 999999999985321                  0123444  7889999999999999999998  8999888


Q ss_pred             CCCeEEEEecCCCcccCCCCcceeeecc
Q 035504          146 DLPRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       146 ~~g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      +.|+||++||..+..+  +...|+++|+
T Consensus       620 ggGrIVnISSiAG~~G--g~saYaASKA  645 (1688)
T 2pff_A          620 PAQVILPMSPNHGTFG--GDGMYSESKL  645 (1688)
T ss_dssp             CEEECCCCCSCTTTSS--CBTTHHHHHH
T ss_pred             CCCEEEEEEChHhccC--CchHHHHHHH
Confidence            7789999999999886  6789999985

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.92  E-value=1.7e-25  Score=179.45  Aligned_cols=149  Identities=23%  Similarity=0.227  Sum_probs=126.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeChh---HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDEK---RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||++|||.+++++|+++|++ |++++|+..   ...+..+++...+ .++.++.+|++|.+++.++++++ +.++
T Consensus       228 ~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g-~~v~~~~~Dv~d~~~v~~~~~~i-~~~g  305 (486)
T 2fr1_A          228 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG-ARTTVAACDVTDRESVRELLGGI-GDDV  305 (486)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHTS-CTTS
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHHHHHHH-HhcC
Confidence            5899999999999999999999995 999999864   3455666676654 45899999999999999999988 6678


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|+||||||+....                   .+.+.+.++++++|++|+.|++++.+.+.    +.+.++||++||+
T Consensus       306 ~ld~VIh~AG~~~~~-------------------~l~~~~~~~~~~~~~~nv~g~~~L~~~~~----~~~~~~~V~~SS~  362 (486)
T 2fr1_A          306 PLSAVFHAAATLDDG-------------------TVDTLTGERIERASRAKVLGARNLHELTR----ELDLTAFVLFSSF  362 (486)
T ss_dssp             CEEEEEECCCCCCCC-------------------CGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSCCSEEEEEEEH
T ss_pred             CCcEEEECCccCCCC-------------------ccccCCHHHHHHHHHHHHHHHHHHHHHhC----cCCCCEEEEEcCh
Confidence            999999999985421                   23456788999999999999999999874    3456899999999


Q ss_pred             CCcccCCCCcceeeeccC
Q 035504          157 MGKLKNTWQGAICYLTFL  174 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~~  174 (174)
                      ++..+.+++..|+++|.|
T Consensus       363 a~~~g~~g~~~Yaaaka~  380 (486)
T 2fr1_A          363 ASAFGAPGLGGYAPGNAY  380 (486)
T ss_dssp             HHHTCCTTCTTTHHHHHH
T ss_pred             HhcCCCCCCHHHHHHHHH
Confidence            999999999999999864

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.92  E-value=8.8e-25  Score=193.11  Aligned_cols=153  Identities=23%  Similarity=0.252  Sum_probs=126.3

Q ss_pred             CEEEecCCCc-hhHHHHHHHHHCCCeEEEEe-eChhHHHHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhh-
Q 035504            1 YAVVTGANKG-IGYETVRQLASNGIIVVLTA-RDEKRGLEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQ-   74 (174)
Q Consensus         1 ~~litGa~~g-iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-   74 (174)
                      ++|||||++| ||.++|++|+++|++|++++ |+.+...+..+++...   .+.++.++.+|++|+++++++++++.+. 
T Consensus       654 vaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~  733 (1878)
T 2uv9_A          654 HALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTK  733 (1878)
T ss_dssp             EEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSS
T ss_pred             EEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence            4899999999 99999999999999999996 5555555555555322   1346899999999999999999999998 


Q ss_pred             --cC-CccEEEecccccCccCCCCCccccccCCCCcccccccccC--HHHHHHhhHhhhhhHHHHHHh--hhhhccCCCC
Q 035504           75 --FG-KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPT--YELAEKCLRTNYYGSKRMCEV--LIPLLQLSDL  147 (174)
Q Consensus        75 --~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~m~~~~~  147 (174)
                        +| +||+||||||+....                  ..+.+.+  .++|+++|++|+.+++.+++.  .+|.|++++.
T Consensus       734 ~~~G~~IDiLVnNAGi~~~~------------------~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~  795 (1878)
T 2uv9_A          734 NGLGWDLDYVVPFAAIPENG------------------REIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPA  795 (1878)
T ss_dssp             SSCCCCCSEEEECCCCCCTT------------------CCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCE
T ss_pred             cccCCCCcEEEeCcccccCC------------------CChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCC
Confidence              99 999999999985321                  0233445  788999999999999999977  7889988777


Q ss_pred             CeEEEEecCCCcccCCCCcceeeecc
Q 035504          148 PRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       148 g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      |+||++||..+..+  +...|+++|+
T Consensus       796 G~IVnISS~ag~~g--g~~aYaASKA  819 (1878)
T 2uv9_A          796 QVILPLSPNHGTFG--NDGLYSESKL  819 (1878)
T ss_dssp             EECCEECSCSSSSS--CCSSHHHHHH
T ss_pred             CEEEEEcchhhccC--CchHHHHHHH
Confidence            89999999999887  4789999985

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.91  E-value=9.7e-25  Score=156.21  Aligned_cols=129  Identities=15%  Similarity=0.115  Sum_probs=111.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+ +|++|++++|+.+                  .+.+|++|+++++++++++    +++|+
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------~~~~D~~~~~~~~~~~~~~----~~~d~   61 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------DVTVDITNIDSIKKMYEQV----GKVDA   61 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------SEECCTTCHHHHHHHHHHH----CCEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------ceeeecCCHHHHHHHHHHh----CCCCE
Confidence            38999999999999999999 9999999999853                  3689999999999888764    78999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   .+..+.+.+++++.+++|+.+++++++++.|.|++.  ++||++||..+..
T Consensus        62 vi~~ag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~  120 (202)
T 3d7l_A           62 IVSATGSATF-------------------SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMED  120 (202)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--EEEEEECCGGGTS
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--CEEEEEcchhhcC
Confidence            9999997432                   123455778899999999999999999999999653  8999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|.
T Consensus       121 ~~~~~~~Y~~sK~  133 (202)
T 3d7l_A          121 PIVQGASAAMANG  133 (202)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCccHHHHHHHH
Confidence            8888899998885

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.91  E-value=4.8e-24  Score=171.91  Aligned_cols=146  Identities=25%  Similarity=0.271  Sum_probs=121.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChh---HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEK---RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||++|||.+++++|+++|+ +|++++|+..   ...+..+++...+ .++.++.+|++|.+++++++++     +
T Consensus       261 ~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g-~~v~~~~~Dvtd~~~v~~~~~~-----~  334 (511)
T 2z5l_A          261 TVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHG-CEVVHAACDVAERDALAALVTA-----Y  334 (511)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTT-CEEEEEECCSSCHHHHHHHHHH-----S
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHHHHhc-----C
Confidence            589999999999999999999999 5999999864   3455666676544 4599999999999999998876     7


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|+||||||+....                   .+.+.+.+++++++++|+.|++++.+.+.+.   .+.++||++||+
T Consensus       335 ~ld~VVh~AGv~~~~-------------------~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~  392 (511)
T 2z5l_A          335 PPNAVFHTAGILDDA-------------------VIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSV  392 (511)
T ss_dssp             CCSEEEECCCCCCCB-------------------CGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEG
T ss_pred             CCcEEEECCcccCCc-------------------ccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCH
Confidence            899999999985431                   2345678889999999999999999887432   145899999999


Q ss_pred             CCcccCCCCcceeeeccC
Q 035504          157 MGKLKNTWQGAICYLTFL  174 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~~  174 (174)
                      .+..+.+++..|+++|.|
T Consensus       393 a~~~g~~g~~~YaaaKa~  410 (511)
T 2z5l_A          393 TGTWGNAGQGAYAAANAA  410 (511)
T ss_dssp             GGTTCCTTBHHHHHHHHH
T ss_pred             HhcCCCCCCHHHHHHHHH
Confidence            999999999999999864

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.91  E-value=5.4e-25  Score=157.93  Aligned_cols=138  Identities=19%  Similarity=0.173  Sum_probs=112.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++  +|++++|+.+...+..+++.     . .++.+|++|++++++++++    ++++|+
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~----~~~id~   69 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG-----A-RALPADLADELEAKALLEE----AGPLDL   69 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT-----C-EECCCCTTSHHHHHHHHHH----HCSEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc-----C-cEEEeeCCCHHHHHHHHHh----cCCCCE
Confidence            4899999999999999999998  99999998776665555442     1 7789999999999998876    789999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   ++.+.+.+++++.+++|+.+++++++++    ++++.++||++||..+..
T Consensus        70 vi~~ag~~~~~-------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~  126 (207)
T 2yut_A           70 LVHAVGKAGRA-------------------SVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYV  126 (207)
T ss_dssp             EEECCCCCCCB-------------------CSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHH
T ss_pred             EEECCCcCCCC-------------------ChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhcc
Confidence            99999975321                   1234456678888999999999999998    344568999999999988


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+.+|.
T Consensus       127 ~~~~~~~Y~~sK~  139 (207)
T 2yut_A          127 QVPGFAAYAAAKG  139 (207)
T ss_dssp             SSTTBHHHHHHHH
T ss_pred             CCCCcchHHHHHH
Confidence            8888899998885

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.91  E-value=9.9e-26  Score=166.95  Aligned_cols=116  Identities=20%  Similarity=0.255  Sum_probs=97.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+....             . +.+|++|.++++++++++   .+++|+
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~-~~~Dl~~~~~v~~~~~~~---~~~id~   65 (257)
T 1fjh_A            3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------D-LSTAEGRKQAIADVLAKC---SKGMDG   65 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------C-TTSHHHHHHHHHHHHTTC---TTCCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------------c-cccCCCCHHHHHHHHHHh---CCCCCE
Confidence            48999999999999999999999999999998653210             1 578999999988877632   389999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ||||||...+.                          +.+++.+++|+.++++++++++|.|++++.|+||++||..+.
T Consensus        66 lv~~Ag~~~~~--------------------------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  118 (257)
T 1fjh_A           66 LVLCAGLGPQT--------------------------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA  118 (257)
T ss_dssp             EEECCCCCTTC--------------------------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred             EEECCCCCCCc--------------------------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence            99999974310                          015677999999999999999999988888999999999987

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.90  E-value=3.5e-24  Score=196.20  Aligned_cols=151  Identities=21%  Similarity=0.183  Sum_probs=117.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeChhH---HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDEKR---GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||++|||+++|+.|+++|++ |++++|+...   ..+..+++.+.+ .++.++.+|++|+++++++++++. ++|
T Consensus      1886 ~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g-~~v~~~~~Dvsd~~~v~~~~~~~~-~~g 1963 (2512)
T 2vz8_A         1886 SYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQG-VQVLVSTSNASSLDGARSLITEAT-QLG 1963 (2512)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTT-CEEEEECCCSSSHHHHHHHHHHHH-HHS
T ss_pred             EEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCC-CEEEEEecCCCCHHHHHHHHHHHH-hcC
Confidence            4899999999999999999999997 8888887543   234455555544 468899999999999999999987 489


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      +||++|||||+....                   .+.+++.++|++++++|+.|++++.+.+.+.|.+.  |+||++||+
T Consensus      1964 ~id~lVnnAgv~~~~-------------------~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ 2022 (2512)
T 2vz8_A         1964 PVGGVFNLAMVLRDA-------------------VLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSV 2022 (2512)
T ss_dssp             CEEEEEECCCC-----------------------------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCH
T ss_pred             CCcEEEECCCcCCCC-------------------chhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecch
Confidence            999999999985321                   23455667777889999999999999999988654  899999999


Q ss_pred             CCcccCCCCcceeeeccC
Q 035504          157 MGKLKNTWQGAICYLTFL  174 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~~  174 (174)
                      ++..+.+++..|+++|++
T Consensus      2023 ag~~g~~g~~~Y~aaKaa 2040 (2512)
T 2vz8_A         2023 SCGRGNAGQANYGFANSA 2040 (2512)
T ss_dssp             HHHTTCTTCHHHHHHHHH
T ss_pred             hhcCCCCCcHHHHHHHHH
Confidence            999999999999999964

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.87  E-value=6e-23  Score=153.03  Aligned_cols=125  Identities=23%  Similarity=0.159  Sum_probs=101.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.....          ..++.++.+|++|.++++++++       ++|+
T Consensus         5 ~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   67 (267)
T 3rft_A            5 RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVA-------GCDG   67 (267)
T ss_dssp             EEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHc-------CCCE
Confidence            4899999999999999999999999999999864321          2458999999999999988876       7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc-
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK-  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~-  159 (174)
                      ||||||....                           +.+++.+++|+.+++++++++    ++++.++||++||..+. 
T Consensus        68 vi~~Ag~~~~---------------------------~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iv~~SS~~~~g  116 (267)
T 3rft_A           68 IVHLGGISVE---------------------------KPFEQILQGNIIGLYNLYEAA----RAHGQPRIVFASSNHTIG  116 (267)
T ss_dssp             EEECCSCCSC---------------------------CCHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGT
T ss_pred             EEECCCCcCc---------------------------CCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcchHHhC
Confidence            9999997311                           123456999999999999999    44566899999998776 


Q ss_pred             -----------ccCCCCcceeeecc
Q 035504          160 -----------LKNTWQGAICYLTF  173 (174)
Q Consensus       160 -----------~~~~~~~~y~~~k~  173 (174)
                                 .+.+....|+.+|+
T Consensus       117 ~~~~~~~~~e~~~~~~~~~Y~~sK~  141 (267)
T 3rft_A          117 YYPQTERLGPDVPARPDGLYGVSKC  141 (267)
T ss_dssp             TSBTTSCBCTTSCCCCCSHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCChHHHHHH
Confidence                       33345578888885

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.87  E-value=1.9e-23  Score=154.08  Aligned_cols=119  Identities=22%  Similarity=0.178  Sum_probs=98.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||++++++|+++|++|++++|+.+....              .+.+|++|.++++++++++   .+++|+
T Consensus         3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------~~~~D~~~~~~~~~~~~~~---~~~~d~   65 (255)
T 2dkn_A            3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------------DLSTPGGRETAVAAVLDRC---GGVLDG   65 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------CTTSHHHHHHHHHHHHHHH---TTCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------------cccCCcccHHHHHHHHHHc---CCCccE
Confidence            48999999999999999999999999999998643110              1578999999998888754   378999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                          +.+++.+++|+.++++++++++|.|++++.++||++||..+..
T Consensus        66 vi~~Ag~~~~~--------------------------~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  119 (255)
T 2dkn_A           66 LVCCAGVGVTA--------------------------ANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQ  119 (255)
T ss_dssp             EEECCCCCTTS--------------------------SCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGS
T ss_pred             EEECCCCCCcc--------------------------hhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccc
Confidence            99999974310                          1145669999999999999999999888779999999998876


Q ss_pred             cC
Q 035504          161 KN  162 (174)
Q Consensus       161 ~~  162 (174)
                      +.
T Consensus       120 ~~  121 (255)
T 2dkn_A          120 PG  121 (255)
T ss_dssp             TT
T ss_pred             cc
Confidence            54

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.85  E-value=3.7e-21  Score=176.95  Aligned_cols=160  Identities=21%  Similarity=0.183  Sum_probs=116.1

Q ss_pred             CEEEecCCCc-hhHHHHHHHHHCCCeEEEEeeChhH-----HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh-
Q 035504            1 YAVVTGANKG-IGYETVRQLASNGIIVVLTARDEKR-----GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS-   73 (174)
Q Consensus         1 ~~litGa~~g-iG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~-   73 (174)
                      ++|||||++| ||+++|+.|+++|++|++++|+.+.     +++..+++...+ .++..+.+|++|+++++++++++.+ 
T Consensus      2138 vaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G-~~~~~v~~Dvtd~~~v~~lv~~i~~~ 2216 (3089)
T 3zen_D         2138 VAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFD-ATLWVVPANMASYSDIDKLVEWVGTE 2216 (3089)
T ss_dssp             EEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTT-CEEEEEECCTTCHHHHHHHHHHHTSC
T ss_pred             EEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHHHHHHhh
Confidence            5899999999 9999999999999999999998655     444445554433 4588899999999999999999998 


Q ss_pred             ---hcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCC--
Q 035504           74 ---QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP--  148 (174)
Q Consensus        74 ---~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g--  148 (174)
                         ++|++|+||||||+.....+.   .....+.+.++|+.       .++..+++|+.+++.+++.+.|.|++++.+  
T Consensus      2217 ~~~~fG~IDILVNNAGi~d~~~~~---a~~~~~~~~e~~~~-------~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~ 2286 (3089)
T 3zen_D         2217 QTESLGPQSIHLKDAQTPTLLFPF---AAPRVAGDMSEVGS-------RAEMEMKVLLWAVQRLISGLSKIGAERDIASR 2286 (3089)
T ss_dssp             CEEEESSSEEEECCCCCCSEEEEC---CCCCCCCTTSCTTS-------HHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             hhhhcCCCCEEEECCCcccccCcc---cccccCCCHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCce
Confidence               899999999999972110000   00012223333332       234458999999999999999999876542  


Q ss_pred             --eEEEEecCCCcccCCCCcceeeecc
Q 035504          149 --RIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       149 --~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                        .|+..|+..+..  ++.+.|+++|+
T Consensus      2287 ~~ii~~~ss~~g~~--g~~~aYsASKa 2311 (3089)
T 3zen_D         2287 LHVVLPGSPNRGMF--GGDGAYGEAKS 2311 (3089)
T ss_dssp             EEEEEEECSSTTSC--SSCSSHHHHGG
T ss_pred             eEEEEECCcccccC--CCchHHHHHHH
Confidence              333444444433  35568999995

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.84  E-value=3.4e-21  Score=147.65  Aligned_cols=127  Identities=23%  Similarity=0.225  Sum_probs=99.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.....+..+++....+.++.++.+|++|.+++++++++     +++|+
T Consensus         7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   81 (341)
T 3enk_A            7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HPITA   81 (341)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SCCCE
T ss_pred             EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cCCcE
Confidence            4899999999999999999999999999999766555555555544344689999999999999988875     48999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +|||||......                       ..+...+.+++|+.++.++++++    ++.+.++||++||....
T Consensus        82 vih~A~~~~~~~-----------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~  133 (341)
T 3enk_A           82 AIHFAALKAVGE-----------------------SVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVY  133 (341)
T ss_dssp             EEECCCCCCHHH-----------------------HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGB
T ss_pred             EEECccccccCc-----------------------cccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEe
Confidence            999999753210                       11223456899999999988776    55566899999996543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.82  E-value=1.1e-20  Score=138.09  Aligned_cols=126  Identities=18%  Similarity=0.132  Sum_probs=98.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCce-eEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSV-IFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|+||++++++|+++|++|++++|+.+...+...       .++ .++.+|++  +       .+.+.++++|
T Consensus        23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------~~~~~~~~~Dl~--~-------~~~~~~~~~D   86 (236)
T 3e8x_A           23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------RGASDIVVANLE--E-------DFSHAFASID   86 (236)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------TTCSEEEECCTT--S-------CCGGGGTTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------CCCceEEEcccH--H-------HHHHHHcCCC
Confidence            48999999999999999999999999999999776544322       147 89999998  3       3344566899


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||....                           +++++.+++|+.++.++++++    ++.+.++||++||..+.
T Consensus        87 ~vi~~ag~~~~---------------------------~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~  135 (236)
T 3e8x_A           87 AVVFAAGSGPH---------------------------TGADKTILIDLWGAIKTIQEA----EKRGIKRFIMVSSVGTV  135 (236)
T ss_dssp             EEEECCCCCTT---------------------------SCHHHHHHTTTHHHHHHHHHH----HHHTCCEEEEECCTTCS
T ss_pred             EEEECCCCCCC---------------------------CCccccchhhHHHHHHHHHHH----HHcCCCEEEEEecCCCC
Confidence            99999997421                           123456999999999999998    44456899999997776


Q ss_pred             ccC---CCCcceeeecc
Q 035504          160 LKN---TWQGAICYLTF  173 (174)
Q Consensus       160 ~~~---~~~~~y~~~k~  173 (174)
                      .+.   +....|+.+|.
T Consensus       136 ~~~~~~~~~~~Y~~sK~  152 (236)
T 3e8x_A          136 DPDQGPMNMRHYLVAKR  152 (236)
T ss_dssp             CGGGSCGGGHHHHHHHH
T ss_pred             CCCCChhhhhhHHHHHH
Confidence            654   45677877774

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.81  E-value=1.6e-20  Score=135.79  Aligned_cols=122  Identities=15%  Similarity=0.264  Sum_probs=99.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC-hhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD-PATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||+|+||++++++|+++|++|++++|+.+...+.         .++.++.+|++| .+++.++++       ++|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~~-------~~d   65 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------NNVKAVHFDVDWTPEEMAKQLH-------GMD   65 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------TTEEEEECCTTSCHHHHHTTTT-------TCS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------CCceEEEecccCCHHHHHHHHc-------CCC
Confidence            489999999999999999999999999999987543221         358999999999 887776654       799


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||....                               ..+++|+.++.++++++    ++.+.++||++||..+.
T Consensus        66 ~vi~~ag~~~~-------------------------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~  110 (219)
T 3dqp_A           66 AIINVSGSGGK-------------------------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSL  110 (219)
T ss_dssp             EEEECCCCTTS-------------------------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTT
T ss_pred             EEEECCcCCCC-------------------------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECccccc
Confidence            99999997431                               12789999999999888    45566899999999887


Q ss_pred             ccCCC-------Ccceeeecc
Q 035504          160 LKNTW-------QGAICYLTF  173 (174)
Q Consensus       160 ~~~~~-------~~~y~~~k~  173 (174)
                      .+.+.       ...|+.+|.
T Consensus       111 ~~~~~~e~~~~~~~~Y~~sK~  131 (219)
T 3dqp_A          111 QPEKWIGAGFDALKDYYIAKH  131 (219)
T ss_dssp             CGGGCCSHHHHHTHHHHHHHH
T ss_pred             CCCcccccccccccHHHHHHH
Confidence            76665       677877764

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.80  E-value=2.9e-19  Score=139.61  Aligned_cols=127  Identities=21%  Similarity=0.183  Sum_probs=95.4

Q ss_pred             CEEEecCCCchhHHHHHHHH-HCCCeEEEEeeChhH---------HHHHHHHHhhcCC----Cc---eeEEEeecCChhh
Q 035504            1 YAVVTGANKGIGYETVRQLA-SNGIIVVLTARDEKR---------GLEAVEKLKHSGF----DS---VIFHQLDVADPAT   63 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~-~~g~~v~~~~r~~~~---------~~~~~~~l~~~~~----~~---~~~~~~Dv~~~~~   63 (174)
                      ++|||||+|+||.+++++|+ ++|++|++++|+...         .....+.+....+    .+   +.++.+|++|.++
T Consensus         4 ~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   83 (397)
T 1gy8_A            4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF   83 (397)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHH
Confidence            48999999999999999999 999999999987543         2233222333221    24   8899999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhcc
Q 035504           64 IHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQ  143 (174)
Q Consensus        64 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~  143 (174)
                      +++++++    ++++|+||||||.....                       .+.++++..+++|+.++.++++++    +
T Consensus        84 ~~~~~~~----~~~~d~vih~A~~~~~~-----------------------~~~~~~~~~~~~Nv~g~~~ll~a~----~  132 (397)
T 1gy8_A           84 LNGVFTR----HGPIDAVVHMCAFLAVG-----------------------ESVRDPLKYYDNNVVGILRLLQAM----L  132 (397)
T ss_dssp             HHHHHHH----SCCCCEEEECCCCCCHH-----------------------HHHHCHHHHHHHHHHHHHHHHHHH----H
T ss_pred             HHHHHHh----cCCCCEEEECCCccCcC-----------------------cchhhHHHHHHHHhHHHHHHHHHH----H
Confidence            8877763    55699999999974321                       022445677999999999999987    4


Q ss_pred             CCCCCeEEEEecCCC
Q 035504          144 LSDLPRIVNVSSNMG  158 (174)
Q Consensus       144 ~~~~g~iv~isS~~~  158 (174)
                      +.+.++||++||...
T Consensus       133 ~~~~~~iv~~SS~~v  147 (397)
T 1gy8_A          133 LHKCDKIIFSSSAAI  147 (397)
T ss_dssp             HTTCCEEEEEEEGGG
T ss_pred             HhCCCEEEEECCHHH
Confidence            445689999999643

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.80  E-value=8.8e-20  Score=139.71  Aligned_cols=141  Identities=18%  Similarity=0.151  Sum_probs=99.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|......+..+.+....+.++.++.+|++|++++++++++.     ++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCE
Confidence            48999999999999999999999999998764321112222232222235788999999999998887642     6999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||......                       ..++..+.+++|+.++.++++++    ++.+.++||++||....-
T Consensus        77 vih~A~~~~~~~-----------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g  129 (338)
T 1udb_A           77 VIHFAGLKAVGE-----------------------SVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYG  129 (338)
T ss_dssp             EEECCSCCCHHH-----------------------HHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGC
T ss_pred             EEECCccCcccc-----------------------chhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhC
Confidence            999998743210                       11223456899999999999876    444557999999975431


Q ss_pred             -----------c-CCCCcceeeecc
Q 035504          161 -----------K-NTWQGAICYLTF  173 (174)
Q Consensus       161 -----------~-~~~~~~y~~~k~  173 (174)
                                 + .|....|+.+|.
T Consensus       130 ~~~~~~~~e~~~~~~~~~~Y~~sK~  154 (338)
T 1udb_A          130 DNPKIPYVESFPTGTPQSPYGKSKL  154 (338)
T ss_dssp             SCCSSSBCTTSCCCCCSSHHHHHHH
T ss_pred             CCCCCCcCcccCCCCCCChHHHHHH
Confidence                       1 123567887774

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.79  E-value=2.6e-20  Score=136.42  Aligned_cols=127  Identities=14%  Similarity=0.006  Sum_probs=98.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||++|||++++++|+++|+  +|++++|+.+...+..    .   .++.++.+|++|+++++++++       ++
T Consensus        20 ~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~----~---~~~~~~~~D~~d~~~~~~~~~-------~~   85 (242)
T 2bka_A           20 SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----Y---KNVNQEVVDFEKLDDYASAFQ-------GH   85 (242)
T ss_dssp             EEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----G---GGCEEEECCGGGGGGGGGGGS-------SC
T ss_pred             eEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc----c---CCceEEecCcCCHHHHHHHhc-------CC
Confidence            489999999999999999999999  9999999865322111    0   247889999999998877664       79


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||....                          .+.++..+++|+.++..+++++    ++.+.++||++||..+
T Consensus        86 d~vi~~ag~~~~--------------------------~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           86 DVGFCCLGTTRG--------------------------KAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             SEEEECCCCCHH--------------------------HHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTC
T ss_pred             CEEEECCCcccc--------------------------cCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcC
Confidence            999999987321                          1234567999999999998876    4455689999999877


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..  +....|+.+|+
T Consensus       136 ~~--~~~~~Y~~sK~  148 (242)
T 2bka_A          136 DK--SSNFLYLQVKG  148 (242)
T ss_dssp             CT--TCSSHHHHHHH
T ss_pred             CC--CCcchHHHHHH
Confidence            64  33467887774

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.79  E-value=1.2e-19  Score=139.37  Aligned_cols=141  Identities=19%  Similarity=0.205  Sum_probs=102.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH------HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR------GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQ   74 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~------~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   74 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+...      ..+..+++....+.++.++.+|++|.+++++++++.   
T Consensus         4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~---   80 (348)
T 1ek6_A            4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY---   80 (348)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC---
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc---
Confidence            48999999999999999999999999999885322      122333333322245889999999999988887653   


Q ss_pred             cCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEe
Q 035504           75 FGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVS  154 (174)
Q Consensus        75 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~is  154 (174)
                        ++|+||||||.....                       .+.++..+.+++|+.++.++++++    ++.+.++||++|
T Consensus        81 --~~d~vih~A~~~~~~-----------------------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~S  131 (348)
T 1ek6_A           81 --SFMAVIHFAGLKAVG-----------------------ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSS  131 (348)
T ss_dssp             --CEEEEEECCSCCCHH-----------------------HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEE
T ss_pred             --CCCEEEECCCCcCcc-----------------------chhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEEC
Confidence              799999999874321                       022344567999999999999876    445568999999


Q ss_pred             cCCCccc------------CCCCcceeeecc
Q 035504          155 SNMGKLK------------NTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~~~~------------~~~~~~y~~~k~  173 (174)
                      |....-.            .|....|+.+|.
T Consensus       132 S~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~  162 (348)
T 1ek6_A          132 SATVYGNPQYLPLDEAHPTGGCTNPYGKSKF  162 (348)
T ss_dssp             EGGGGCSCSSSSBCTTSCCCCCSSHHHHHHH
T ss_pred             cHHHhCCCCCCCcCCCCCCCCCCCchHHHHH
Confidence            9754321            122567877774

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.79  E-value=5.8e-19  Score=135.34  Aligned_cols=125  Identities=16%  Similarity=0.095  Sum_probs=96.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+. ....+..+.+...  .++.++.+|++|.++++++++..     ++|
T Consensus         3 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (347)
T 1orr_A            3 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL--GNFEFVHGDIRNKNDVTRLITKY-----MPD   75 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC--CceEEEEcCCCCHHHHHHHHhcc-----CCC
Confidence            489999999999999999999999999999842 2223333444432  25889999999999999888753     699


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      +||||||....                       +.+.++++..+++|+.++.++++++.+.+.   .++||++||...
T Consensus        76 ~vih~A~~~~~-----------------------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v  128 (347)
T 1orr_A           76 SCFHLAGQVAM-----------------------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKV  128 (347)
T ss_dssp             EEEECCCCCCH-----------------------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGG
T ss_pred             EEEECCcccCh-----------------------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHH
Confidence            99999987321                       112234566799999999999999987753   269999999753

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.79  E-value=9.3e-20  Score=139.42  Aligned_cols=133  Identities=14%  Similarity=0.105  Sum_probs=101.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.....+..+++     .++.++.+|++|.++++++++++     ++|+
T Consensus        22 ~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-----~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~   91 (330)
T 2pzm_A           22 RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-----AGLSVIEGSVTDAGLLERAFDSF-----KPTH   91 (330)
T ss_dssp             EEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-----TTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-----CCceEEEeeCCCHHHHHHHHhhc-----CCCE
Confidence            4899999999999999999999999999999644322111111     35889999999999999888766     7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                        +.++++  +++|+.++.++++++.    +.+.++||++||....-
T Consensus        92 vih~A~~~~~~------------------------~~~~~~--~~~N~~~~~~l~~a~~----~~~~~~iV~~SS~~~~~  141 (330)
T 2pzm_A           92 VVHSAAAYKDP------------------------DDWAED--AATNVQGSINVAKAAS----KAGVKRLLNFQTALCYG  141 (330)
T ss_dssp             EEECCCCCSCT------------------------TCHHHH--HHHHTHHHHHHHHHHH----HHTCSEEEEEEEGGGGC
T ss_pred             EEECCccCCCc------------------------cccChh--HHHHHHHHHHHHHHHH----HcCCCEEEEecCHHHhC
Confidence            99999874210                        223344  8999999999999985    33458999999986643


Q ss_pred             cC-----C------CCcceeeecc
Q 035504          161 KN-----T------WQGAICYLTF  173 (174)
Q Consensus       161 ~~-----~------~~~~y~~~k~  173 (174)
                      +.     |      ....|+.+|.
T Consensus       142 ~~~~~~~~~~E~~~~~~~Y~~sK~  165 (330)
T 2pzm_A          142 RPATVPIPIDSPTAPFTSYGISKT  165 (330)
T ss_dssp             SCSSSSBCTTCCCCCCSHHHHHHH
T ss_pred             CCccCCCCcCCCCCCCChHHHHHH
Confidence            32     2      4567877774

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.79  E-value=3.3e-19  Score=137.39  Aligned_cols=133  Identities=17%  Similarity=0.261  Sum_probs=104.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||.+++++|+++ |+ +|++++|+.....+..+++..   .++.++.+|++|.+++.++++       ++
T Consensus        23 ~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~---~~v~~~~~Dl~d~~~l~~~~~-------~~   92 (344)
T 2gn4_A           23 TILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND---PRMRFFIGDVRDLERLNYALE-------GV   92 (344)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC---TTEEEEECCTTCHHHHHHHTT-------TC
T ss_pred             EEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC---CCEEEEECCCCCHHHHHHHHh-------cC
Confidence            4899999999999999999999 97 999999987765555555532   358999999999998887765       79


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||......                       ......+.+++|+.++.++++++.+.    +.++||++||..+
T Consensus        93 D~Vih~Aa~~~~~~-----------------------~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~  145 (344)
T 2gn4_A           93 DICIHAAALKHVPI-----------------------AEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKA  145 (344)
T ss_dssp             SEEEECCCCCCHHH-----------------------HHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGG
T ss_pred             CEEEECCCCCCCCc-----------------------hhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCcc
Confidence            99999999743210                       11123466999999999999999654    4589999999776


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+   ...|+.+|.
T Consensus       146 ~~p---~~~Y~~sK~  157 (344)
T 2gn4_A          146 ANP---INLYGATKL  157 (344)
T ss_dssp             SSC---CSHHHHHHH
T ss_pred             CCC---ccHHHHHHH
Confidence            543   467888774

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.79  E-value=4.8e-19  Score=137.15  Aligned_cols=144  Identities=18%  Similarity=0.096  Sum_probs=99.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH-HHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG-LEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.... .+..+.+...   .+.++.++.+|++|.+++.++++.+     
T Consensus         3 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   77 (372)
T 1db3_A            3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-----   77 (372)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-----
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc-----
Confidence            489999999999999999999999999999975431 1112222111   1235888999999999999988866     


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|+||||||.....                       .+.++++..+++|+.++.++++++.+.+.+ +.++||++||.
T Consensus        78 ~~d~vih~A~~~~~~-----------------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~  133 (372)
T 1db3_A           78 QPDEVYNLGAMSHVA-----------------------VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTS  133 (372)
T ss_dssp             CCSEEEECCCCCTTT-----------------------TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEG
T ss_pred             CCCEEEECCcccCcc-----------------------ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCh
Confidence            799999999974321                       011223456899999999999999776543 23899999997


Q ss_pred             CCcccC-----------CCCcceeeecc
Q 035504          157 MGKLKN-----------TWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~-----------~~~~~y~~~k~  173 (174)
                      ...-+.           .....|+.+|.
T Consensus       134 ~v~g~~~~~~~~E~~~~~~~~~Y~~sK~  161 (372)
T 1db3_A          134 ELYGLVQEIPQKETTPFYPRSPYAVAKL  161 (372)
T ss_dssp             GGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred             hhhCCCCCCCCCccCCCCCCChHHHHHH
Confidence            543211           22456777764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.79  E-value=2e-19  Score=136.79  Aligned_cols=131  Identities=18%  Similarity=0.107  Sum_probs=101.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+... ..    +      ++.++.+|++|.++++++++.     +++|+
T Consensus        14 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l------~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   77 (321)
T 2pk3_A           14 RALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P------NVEMISLDIMDSQRVKKVISD-----IKPDY   77 (321)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T------TEEEEECCTTCHHHHHHHHHH-----HCCSE
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c------eeeEEECCCCCHHHHHHHHHh-----cCCCE
Confidence            48999999999999999999999999999998653 11    1      488899999999999988875     37999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                       .+.++++..+++|+.++.++++++ +.+.  +.++||++||....-
T Consensus        78 vih~A~~~~~~-----------------------~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~~~iv~~SS~~v~g  131 (321)
T 2pk3_A           78 IFHLAAKSSVK-----------------------DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LDCRILTIGSSEEYG  131 (321)
T ss_dssp             EEECCSCCCHH-----------------------HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CCCEEEEEEEGGGTB
T ss_pred             EEEcCcccchh-----------------------hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CCCeEEEEccHHhcC
Confidence            99999974321                       011234567999999999999998 5552  358999999986432


Q ss_pred             cC-------------CCCcceeeecc
Q 035504          161 KN-------------TWQGAICYLTF  173 (174)
Q Consensus       161 ~~-------------~~~~~y~~~k~  173 (174)
                      +.             +....|+.+|.
T Consensus       132 ~~~~~~~~~~E~~~~~~~~~Y~~sK~  157 (321)
T 2pk3_A          132 MILPEESPVSEENQLRPMSPYGVSKA  157 (321)
T ss_dssp             SCCGGGCSBCTTSCCBCCSHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCccHHHHH
Confidence            21             34567877774

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.78  E-value=3.9e-19  Score=128.72  Aligned_cols=110  Identities=15%  Similarity=0.130  Sum_probs=88.3

Q ss_pred             CEEEecCCCchhHHHHHHHH-HCCCeEEEEeeChh-HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLA-SNGIIVVLTARDEK-RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~-~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||+++||++++++|+ ++|++|++++|+.+ ..++..    ... .++.++.+|++|+++++++++       ++
T Consensus         7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~~D~~d~~~~~~~~~-------~~   74 (221)
T 3r6d_A            7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDH-ERVTVIEGSFQNPGXLEQAVT-------NA   74 (221)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTS-TTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCC-CceEEEECCCCCHHHHHHHHc-------CC
Confidence            38999999999999999999 89999999999876 433322    122 458999999999999988776       78


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||+|..                                      |+.     ++.+++.|++.+.++||++||..+
T Consensus        75 d~vv~~ag~~--------------------------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           75 EVVFVGAMES--------------------------------------GSD-----MASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             SEEEESCCCC--------------------------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             CEEEEcCCCC--------------------------------------Chh-----HHHHHHHHHhcCCCeEEEEeecee
Confidence            9999999851                                      222     677788888888889999999988


Q ss_pred             cccCCCC
Q 035504          159 KLKNTWQ  165 (174)
Q Consensus       159 ~~~~~~~  165 (174)
                      ..+.|..
T Consensus       112 ~~~~~~~  118 (221)
T 3r6d_A          112 SGEFPVA  118 (221)
T ss_dssp             TSCSCHH
T ss_pred             cCCCCcc
Confidence            7765543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.78  E-value=2.3e-19  Score=137.40  Aligned_cols=140  Identities=17%  Similarity=0.063  Sum_probs=103.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHH-HHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL-EAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.+... +..+.+.  ...++.++.+|++|.+++.++++.+     ++|
T Consensus         5 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   77 (345)
T 2z1m_A            5 RALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG--IENDVKIIHMDLLEFSNIIRTIEKV-----QPD   77 (345)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT--CTTTEEECCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc--ccCceeEEECCCCCHHHHHHHHHhc-----CCC
Confidence            4899999999999999999999999999999765322 1222221  1235888999999999999988876     799


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||.....                       .+.++++..+++|+.++.++++++.+ +.  ..++||++||....
T Consensus        78 ~vih~A~~~~~~-----------------------~~~~~~~~~~~~Nv~g~~~l~~a~~~-~~--~~~~iv~~SS~~vy  131 (345)
T 2z1m_A           78 EVYNLAAQSFVG-----------------------VSFEQPILTAEVDAIGVLRILEALRT-VK--PDTKFYQASTSEMF  131 (345)
T ss_dssp             EEEECCCCCCHH-----------------------HHTTSHHHHHHHHTHHHHHHHHHHHH-HC--TTCEEEEEEEGGGG
T ss_pred             EEEECCCCcchh-----------------------hhhhCHHHHHHHHHHHHHHHHHHHHH-hC--CCceEEEEechhhc
Confidence            999999974210                       11233456699999999999999874 21  13799999998532


Q ss_pred             -----------ccCCCCcceeeecc
Q 035504          160 -----------LKNTWQGAICYLTF  173 (174)
Q Consensus       160 -----------~~~~~~~~y~~~k~  173 (174)
                                 .+.+....|+.+|.
T Consensus       132 g~~~~~~~~e~~~~~~~~~Y~~sK~  156 (345)
T 2z1m_A          132 GKVQEIPQTEKTPFYPRSPYAVAKL  156 (345)
T ss_dssp             CSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             CCCCCCCCCccCCCCCCChhHHHHH
Confidence                       22334567877774

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.78  E-value=5e-19  Score=136.54  Aligned_cols=124  Identities=19%  Similarity=0.090  Sum_probs=97.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.....+..+.+.  ...++.++.+|++|.+++.++++.+     ++|+
T Consensus        11 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   83 (357)
T 1rkx_A           11 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRDQNKLLESIREF-----QPEI   83 (357)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc--cCCceEEEEccccCHHHHHHHHHhc-----CCCE
Confidence            48999999999999999999999999999997654433333332  1235889999999999999988866     7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      ||||||....                       +.+.+++...+++|+.++.++++++.+.   .+.++||++||..
T Consensus        84 vih~A~~~~~-----------------------~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~  134 (357)
T 1rkx_A           84 VFHMAAQPLV-----------------------RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDK  134 (357)
T ss_dssp             EEECCSCCCH-----------------------HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGG
T ss_pred             EEECCCCccc-----------------------ccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHH
Confidence            9999986211                       1123445677999999999999998653   2257999999975

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.78  E-value=2.2e-19  Score=137.32  Aligned_cols=123  Identities=17%  Similarity=0.118  Sum_probs=96.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEE-EeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFH-QLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+........+.+....+.++.++ .+|++|.++++++++       ++|
T Consensus        13 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d   85 (342)
T 1y1p_A           13 LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------GAA   85 (342)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------TCS
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-------CCC
Confidence            489999999999999999999999999999987665555554444333458888 899999998876654       799


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||.....                          +++++.+++|+.++.++++++.+   +.+.++||++||....
T Consensus        86 ~vih~A~~~~~~--------------------------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~  136 (342)
T 1y1p_A           86 GVAHIASVVSFS--------------------------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSA  136 (342)
T ss_dssp             EEEECCCCCSCC--------------------------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGT
T ss_pred             EEEEeCCCCCCC--------------------------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHh
Confidence            999999874320                          01235699999999999999854   2345899999998665

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.78  E-value=5e-19  Score=137.40  Aligned_cols=144  Identities=16%  Similarity=0.058  Sum_probs=102.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-----HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-----GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+...     ..+..+.+......++.++.+|++|.+++.++++.+    
T Consensus        26 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----  101 (375)
T 1t2a_A           26 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV----  101 (375)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH----
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc----
Confidence            38999999999999999999999999999997542     111111110001235888999999999999988866    


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS  155 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS  155 (174)
                       ++|+||||||.....                       .+.++++..+++|+.++.++++++.+.+.+ +.++||++||
T Consensus       102 -~~d~vih~A~~~~~~-----------------------~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS  156 (375)
T 1t2a_A          102 -KPTEIYNLGAQSHVK-----------------------ISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQAST  156 (375)
T ss_dssp             -CCSEEEECCSCCCHH-----------------------HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEE
T ss_pred             -CCCEEEECCCccccc-----------------------ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecc
Confidence             699999999874321                       123445667999999999999999776542 2379999999


Q ss_pred             CCCcccC-----------CCCcceeeecc
Q 035504          156 NMGKLKN-----------TWQGAICYLTF  173 (174)
Q Consensus       156 ~~~~~~~-----------~~~~~y~~~k~  173 (174)
                      ....-..           .....|+.+|.
T Consensus       157 ~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~  185 (375)
T 1t2a_A          157 SELYGKVQEIPQKETTPFYPRSPYGAAKL  185 (375)
T ss_dssp             GGGTCSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             hhhhCCCCCCCCCccCCCCCCChhHHHHH
Confidence            7654321           13456777764

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.78  E-value=5.9e-19  Score=135.95  Aligned_cols=139  Identities=14%  Similarity=0.040  Sum_probs=101.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH----HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR----GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+...    ..+..+++......++.++.+|++|.+++.++++       
T Consensus        29 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------  101 (352)
T 1sb8_A           29 VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-------  101 (352)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-------
T ss_pred             eEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-------
Confidence            48999999999999999999999999999996532    2222222221111358899999999998887775       


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|+|||+||.....                       .+.++++..+++|+.++.++++++.+    .+.++||++||.
T Consensus       102 ~~d~vih~A~~~~~~-----------------------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~  154 (352)
T 1sb8_A          102 GVDYVLHQAALGSVP-----------------------RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASS  154 (352)
T ss_dssp             TCSEEEECCSCCCHH-----------------------HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEG
T ss_pred             CCCEEEECCcccCch-----------------------hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccH
Confidence            799999999874321                       12234566799999999999999853    455799999998


Q ss_pred             CCcccCC-----------CCcceeeecc
Q 035504          157 MGKLKNT-----------WQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~-----------~~~~y~~~k~  173 (174)
                      ...-+.+           ....|+.+|.
T Consensus       155 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~  182 (352)
T 1sb8_A          155 STYGDHPGLPKVEDTIGKPLSPYAVTKY  182 (352)
T ss_dssp             GGGTTCCCSSBCTTCCCCCCSHHHHHHH
T ss_pred             HhcCCCCCCCCCCCCCCCCCChhHHHHH
Confidence            6643322           2456777663

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.78  E-value=7.5e-19  Score=135.17  Aligned_cols=125  Identities=15%  Similarity=0.089  Sum_probs=96.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC----CceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF----DSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.....+....+.....    .++.++.+|++|.+++.++++       
T Consensus        27 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   99 (351)
T 3ruf_A           27 TWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-------   99 (351)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-------
T ss_pred             eEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-------
Confidence            489999999999999999999999999999975544444444443221    358999999999998887776       


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|+|||+||.....                       ...++....+++|+.++.++++++    ++.+.++||++||.
T Consensus       100 ~~d~Vih~A~~~~~~-----------------------~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~  152 (351)
T 3ruf_A          100 GVDHVLHQAALGSVP-----------------------RSIVDPITTNATNITGFLNILHAA----KNAQVQSFTYAASS  152 (351)
T ss_dssp             TCSEEEECCCCCCHH-----------------------HHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEG
T ss_pred             CCCEEEECCccCCcc-----------------------hhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEecH
Confidence            799999999874321                       122334567999999999999988    44455799999997


Q ss_pred             CCc
Q 035504          157 MGK  159 (174)
Q Consensus       157 ~~~  159 (174)
                      ...
T Consensus       153 ~vy  155 (351)
T 3ruf_A          153 STY  155 (351)
T ss_dssp             GGG
T ss_pred             Hhc
Confidence            554

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.77  E-value=1e-18  Score=126.42  Aligned_cols=113  Identities=15%  Similarity=0.049  Sum_probs=86.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||++++++|+++|++|++++|+.+...+.    .   ..++.++.+|++|.++         +.+.++|+
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~---~~~~~~~~~D~~d~~~---------~~~~~~d~   65 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR----L---GATVATLVKEPLVLTE---------ADLDSVDA   65 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----T---CTTSEEEECCGGGCCH---------HHHTTCSE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc----c---CCCceEEecccccccH---------hhcccCCE
Confidence            489999999999999999999999999999987654322    1   1358999999999887         23458999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                   .           ..++|+.++..+++++    ++.+ +++|++||..+..
T Consensus        66 vi~~ag~~~~~-------------------~-----------~~~~n~~~~~~l~~a~----~~~~-~~~v~~SS~~~~~  110 (224)
T 3h2s_A           66 VVDALSVPWGS-------------------G-----------RGYLHLDFATHLVSLL----RNSD-TLAVFILGSASLA  110 (224)
T ss_dssp             EEECCCCCTTS-------------------S-----------CTHHHHHHHHHHHHTC----TTCC-CEEEEECCGGGSB
T ss_pred             EEECCccCCCc-------------------c-----------hhhHHHHHHHHHHHHH----HHcC-CcEEEEecceeec
Confidence            99999974110                   0           1467887776665554    7777 9999999987766


Q ss_pred             cCCC
Q 035504          161 KNTW  164 (174)
Q Consensus       161 ~~~~  164 (174)
                      +.+.
T Consensus       111 ~~~~  114 (224)
T 3h2s_A          111 MPGA  114 (224)
T ss_dssp             CTTC
T ss_pred             cCCC
Confidence            5443

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.77  E-value=2.4e-18  Score=134.61  Aligned_cols=129  Identities=13%  Similarity=0.061  Sum_probs=95.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHH----------------HHHHHHhhcCCCceeEEEeecCChhhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL----------------EAVEKLKHSGFDSVIFHQLDVADPATI   64 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~----------------~~~~~l~~~~~~~~~~~~~Dv~~~~~i   64 (174)
                      ++|||||+|.||.+++++|+++|++|++++|......                +...++......++.++.+|++|.+++
T Consensus        13 ~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~~   92 (404)
T 1i24_A           13 RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFL   92 (404)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHH
T ss_pred             eEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHHH
Confidence            4899999999999999999999999999998643211                112222221224588999999999999


Q ss_pred             HHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccC
Q 035504           65 HSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQL  144 (174)
Q Consensus        65 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~  144 (174)
                      .++++..     ++|+||||||......                    ...+++.+...+++|+.++.++++++.+.   
T Consensus        93 ~~~~~~~-----~~D~Vih~A~~~~~~~--------------------~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---  144 (404)
T 1i24_A           93 AESFKSF-----EPDSVVHFGEQRSAPY--------------------SMIDRSRAVYTQHNNVIGTLNVLFAIKEF---  144 (404)
T ss_dssp             HHHHHHH-----CCSEEEECCSCCCHHH--------------------HTSCHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHhcc-----CCCEEEECCCCCCccc--------------------hhhCccchhhhHHHHHHHHHHHHHHHHHh---
Confidence            9888765     6999999999743210                    01134455667999999999999998543   


Q ss_pred             CCC-CeEEEEecCCC
Q 035504          145 SDL-PRIVNVSSNMG  158 (174)
Q Consensus       145 ~~~-g~iv~isS~~~  158 (174)
                       +. .+||++||...
T Consensus       145 -~~~~~~V~~SS~~v  158 (404)
T 1i24_A          145 -GEECHLVKLGTMGE  158 (404)
T ss_dssp             -CTTCEEEEECCGGG
T ss_pred             -CCCcEEEEeCcHHH
Confidence             33 49999999743

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.77  E-value=6e-19  Score=137.24  Aligned_cols=145  Identities=16%  Similarity=0.049  Sum_probs=104.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-----HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-----GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+...     ......++...+..++.++.+|++|.+++.++++.+    
T Consensus        30 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----  105 (381)
T 1n7h_A           30 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI----  105 (381)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH----
T ss_pred             eEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc----
Confidence            48999999999999999999999999999997542     111111111111115888999999999999988866    


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccC-CCCCeEEEEe
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQL-SDLPRIVNVS  154 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~iv~is  154 (174)
                       ++|+||||||.....                       .+.++++..+++|+.++.++++++.+.+.+ .+.++||++|
T Consensus       106 -~~d~Vih~A~~~~~~-----------------------~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~S  161 (381)
T 1n7h_A          106 -KPDEVYNLAAQSHVA-----------------------VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAG  161 (381)
T ss_dssp             -CCSEEEECCSCCCHH-----------------------HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred             -CCCEEEECCcccCcc-----------------------ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeC
Confidence             799999999874311                       123445677999999999999999887643 2347999999


Q ss_pred             cCCCcc----------cCCCCcceeeecc
Q 035504          155 SNMGKL----------KNTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~~~----------~~~~~~~y~~~k~  173 (174)
                      |....-          +.+....|+.+|.
T Consensus       162 S~~vyg~~~~~~~E~~~~~~~~~Y~~sK~  190 (381)
T 1n7h_A          162 SSEMFGSTPPPQSETTPFHPRSPYAASKC  190 (381)
T ss_dssp             EGGGGTTSCSSBCTTSCCCCCSHHHHHHH
T ss_pred             cHHHhCCCCCCCCCCCCCCCCCchHHHHH
Confidence            976432          1233466777763

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.77  E-value=2e-18  Score=126.71  Aligned_cols=140  Identities=18%  Similarity=0.142  Sum_probs=97.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHC--CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN--GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||+|+||.+++++|+++  |++|++++|+.+...+    +    ..++.++.+|++|.++++++++       ++
T Consensus         6 ~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~----~~~~~~~~~D~~d~~~~~~~~~-------~~   70 (253)
T 1xq6_A            6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I----GGEADVFIGDITDADSINPAFQ-------GI   70 (253)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T----TCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             EEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----c----CCCeeEEEecCCCHHHHHHHHc-------CC
Confidence            4899999999999999999999  8999999998654322    2    2357889999999999888775       68


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||......... .  ...+..+       +...+.+++.+++|+.++.++++++.    +.+.++||++||..+
T Consensus        71 d~vi~~a~~~~~~~~~~-~--~~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~  136 (253)
T 1xq6_A           71 DALVILTSAVPKMKPGF-D--PTKGGRP-------EFIFEDGQYPEQVDWIGQKNQIDAAK----VAGVKHIVVVGSMGG  136 (253)
T ss_dssp             SEEEECCCCCCEECTTC-C--TTSSCCC-------CEECCTTCSHHHHTTHHHHHHHHHHH----HHTCSEEEEEEETTT
T ss_pred             CEEEEeccccccccccc-c--ccccccc-------hhhccccccceeeeHHHHHHHHHHHH----HcCCCEEEEEcCccC
Confidence            99999999754211000 0  0000000       01112223448999999999998874    334579999999987


Q ss_pred             cccCCCCccee
Q 035504          159 KLKNTWQGAIC  169 (174)
Q Consensus       159 ~~~~~~~~~y~  169 (174)
                      ..+.+....|+
T Consensus       137 ~~~~~~~~~~~  147 (253)
T 1xq6_A          137 TNPDHPLNKLG  147 (253)
T ss_dssp             TCTTCGGGGGG
T ss_pred             CCCCCcccccc
Confidence            65444434443

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.76  E-value=5.4e-19  Score=136.39  Aligned_cols=126  Identities=20%  Similarity=0.167  Sum_probs=95.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChh--HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEK--RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++|||||+|+||.+++++|+++ |++|++++|+..  .... .+++..  ..++.++.+|++|.+++.+++++.     +
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES-LSDISE--SNRYNFEHADICDSAEITRIFEQY-----Q   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG-GTTTTT--CTTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhh-hhhhhc--CCCeEEEECCCCCHHHHHHHHhhc-----C
Confidence            3899999999999999999998 799999998642  1111 122211  235889999999999999888763     7


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-----CCeEEE
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-----LPRIVN  152 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-----~g~iv~  152 (174)
                      +|+||||||....                       +.+.++++..+++|+.++.++++++.+.|+..+     .++||+
T Consensus        74 ~d~vih~A~~~~~-----------------------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~  130 (361)
T 1kew_A           74 PDAVMHLAAESHV-----------------------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHH  130 (361)
T ss_dssp             CSEEEECCSCCCH-----------------------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEE
T ss_pred             CCEEEECCCCcCh-----------------------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEE
Confidence            9999999987421                       112234456799999999999999998875322     359999


Q ss_pred             EecCC
Q 035504          153 VSSNM  157 (174)
Q Consensus       153 isS~~  157 (174)
                      +||..
T Consensus       131 ~SS~~  135 (361)
T 1kew_A          131 ISTDE  135 (361)
T ss_dssp             EEEGG
T ss_pred             eCCHH
Confidence            99964

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.76  E-value=2.6e-18  Score=131.97  Aligned_cols=108  Identities=16%  Similarity=0.132  Sum_probs=89.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+...             .++.++.+|++|.+++.++++       ++|+
T Consensus        21 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~~-------~~d~   80 (347)
T 4id9_A           21 MILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAIM-------GVSA   80 (347)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHHT-------TCSE
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHHh-------CCCE
Confidence            58999999999999999999999999999998653             358889999999999887776       7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |||+|+.....                         ..+++..+++|+.++.++++++    ++.+.++||++||..
T Consensus        81 vih~A~~~~~~-------------------------~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~V~~SS~~  128 (347)
T 4id9_A           81 VLHLGAFMSWA-------------------------PADRDRMFAVNVEGTRRLLDAA----SAAGVRRFVFASSGE  128 (347)
T ss_dssp             EEECCCCCCSS-------------------------GGGHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGG
T ss_pred             EEECCcccCcc-------------------------hhhHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEECCHH
Confidence            99999874321                         1222566999999999999988    445567999999954

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.76  E-value=4.9e-18  Score=130.94  Aligned_cols=169  Identities=15%  Similarity=-0.013  Sum_probs=117.4

Q ss_pred             CEEEecCCCchhHHHHHHHH-HCCCeEEEEeeChhH------------HHHHHHHHhhcCCCceeEEEeecCChhhHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLA-SNGIIVVLTARDEKR------------GLEAVEKLKHSGFDSVIFHQLDVADPATIHSL   67 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~-~~g~~v~~~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~   67 (174)
                      ++||||||+|||++.+..|+ +.|+.++++++..+.            .....+++++.+. +...+.||++|.++++++
T Consensus        52 ~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~-~a~~i~~Dv~d~e~i~~v  130 (401)
T 4ggo_A           52 NVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGL-YSVTIDGDAFSDEIKAQV  130 (401)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTC-CEEEEESCTTSHHHHHHH
T ss_pred             EEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCC-CceeEeCCCCCHHHHHHH
Confidence            48999999999999999998 689999999875432            1223345555554 599999999999999999


Q ss_pred             HHHHHhhcCCccEEEecccccCccCCC--CCccc-----------cccCCCCccccc--ccccCHHHH---HHhhHhhhh
Q 035504           68 ADFVRSQFGKLDILVNNAAIFGVSVDG--DALSG-----------FVKDGEPIKWNE--IVTPTYELA---EKCLRTNYY  129 (174)
Q Consensus        68 ~~~~~~~~g~id~li~~ag~~~~~~~~--~~~~~-----------~~~~~~~~~~~~--~~~~~~~~~---~~~~~~n~~  129 (174)
                      +++++++||+||+||||++......+.  ..+..           ...+.+.+.+.+  +...+.+++   .+.|.....
T Consensus       131 i~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s~~  210 (401)
T 4ggo_A          131 IEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGEDW  210 (401)
T ss_dssp             HHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhhHH
Confidence            999999999999999999986432111  11111           111222222221  123344444   455666667


Q ss_pred             hHHHHHHhhhhhccCCCCCeEEEEecCCCcc--cCCCCcceeeec
Q 035504          130 GSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL--KNTWQGAICYLT  172 (174)
Q Consensus       130 ~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~~y~~~k  172 (174)
                      +.+...+...++|.+  +++++.+|++.+..  |..+.+.++.+|
T Consensus       211 s~w~~al~~a~lla~--G~siva~SYiGse~t~P~Y~~G~mG~AK  253 (401)
T 4ggo_A          211 ERWIKQLSKEGLLEE--GCITLAYSYIGPEATQALYRKGTIGKAK  253 (401)
T ss_dssp             HHHHHHHHHTTCEEE--EEEEEEEECCCCGGGHHHHTTSHHHHHH
T ss_pred             HHHHHHHHhhhcccC--CceEEEEeccCcceeecCCCccHHHHHH
Confidence            778888888888853  48999999988855  444556676666

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.76  E-value=6.8e-19  Score=127.71  Aligned_cols=125  Identities=10%  Similarity=0.038  Sum_probs=96.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.+...+.        ..++.++.+|++|.+++.++++       ++|+
T Consensus         6 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   70 (227)
T 3dhn_A            6 KIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--------NEHLKVKKADVSSLDEVCEVCK-------GADA   70 (227)
T ss_dssp             EEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--------CTTEEEECCCTTCHHHHHHHHT-------TCSE
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--------cCceEEEEecCCCHHHHHHHhc-------CCCE
Confidence            489999999999999999999999999999986643211        1358999999999999888776       6899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                             ...+++|+.++.++++++    ++.+.++||++||.....
T Consensus        71 vi~~a~~~~~~-----------------------------~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~  117 (227)
T 3dhn_A           71 VISAFNPGWNN-----------------------------PDIYDETIKVYLTIIDGV----KKAGVNRFLMVGGAGSLF  117 (227)
T ss_dssp             EEECCCC-----------------------------------CCSHHHHHHHHHHHHH----HHTTCSEEEEECCSTTSE
T ss_pred             EEEeCcCCCCC-----------------------------hhHHHHHHHHHHHHHHHH----HHhCCCEEEEeCChhhcc
Confidence            99999863210                             013889999999999887    445557999999988765


Q ss_pred             cCCC----------Ccceeeecc
Q 035504          161 KNTW----------QGAICYLTF  173 (174)
Q Consensus       161 ~~~~----------~~~y~~~k~  173 (174)
                      +.++          ...|+.+|.
T Consensus       118 ~~~~~~~~~~~~~p~~~Y~~sK~  140 (227)
T 3dhn_A          118 IAPGLRLMDSGEVPENILPGVKA  140 (227)
T ss_dssp             EETTEEGGGTTCSCGGGHHHHHH
T ss_pred             CCCCCccccCCcchHHHHHHHHH
Confidence            4432          456766663

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.76  E-value=7e-19  Score=134.73  Aligned_cols=118  Identities=17%  Similarity=0.142  Sum_probs=87.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.....+    +..   .++.++.+|++|.+++.++++       ++|+
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~---~~~~~~~~Dl~d~~~~~~~~~-------~~d~   80 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY---LEPECRVAEMLDHAGLERALR-------GLDG   80 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG---GCCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc---CCeEEEEecCCCHHHHHHHHc-------CCCE
Confidence            38999999999999999999999999999998654322    221   248889999999988877765       6999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      |||+||....                         ..++.++.+++|+.++.++++++.+.    +.++||++||.....
T Consensus        81 vih~a~~~~~-------------------------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~  131 (342)
T 2x4g_A           81 VIFSAGYYPS-------------------------RPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMP  131 (342)
T ss_dssp             EEEC-------------------------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSC
T ss_pred             EEECCccCcC-------------------------CCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhC
Confidence            9999986321                         11233455999999999999998653    457999999987654


Q ss_pred             c
Q 035504          161 K  161 (174)
Q Consensus       161 ~  161 (174)
                      +
T Consensus       132 ~  132 (342)
T 2x4g_A          132 R  132 (342)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.75  E-value=1.8e-18  Score=132.47  Aligned_cols=119  Identities=21%  Similarity=0.195  Sum_probs=91.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.....+.   +...  .++.++.+|++|.++++++++..     ++|+
T Consensus        23 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~~--~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~   92 (333)
T 2q1w_A           23 KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKDH--PNLTFVEGSIADHALVNQLIGDL-----QPDA   92 (333)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCCC--TTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhhc--CCceEEEEeCCCHHHHHHHHhcc-----CCcE
Confidence            489999999999999999999999999999975321111   1111  35888999999999998888752     6999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ||||||.....                        +.++.+  +++|+.++.++++++.+    .+.++||++||....
T Consensus        93 vih~A~~~~~~------------------------~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~  141 (333)
T 2q1w_A           93 VVHTAASYKDP------------------------DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCY  141 (333)
T ss_dssp             EEECCCCCSCT------------------------TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGG
T ss_pred             EEECceecCCC------------------------ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHh
Confidence            99999974310                        112333  89999999999999854    355799999996543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.75  E-value=6.3e-18  Score=121.86  Aligned_cols=110  Identities=15%  Similarity=0.155  Sum_probs=81.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||++++++|+++|++|++++|+.+...+.    .    .++.++.+|++|.++         +.+.++|+
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~----~~~~~~~~D~~d~~~---------~~~~~~d~   64 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT----H----KDINILQKDIFDLTL---------SDLSDQNV   64 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH----C----SSSEEEECCGGGCCH---------HHHTTCSE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc----c----CCCeEEeccccChhh---------hhhcCCCE
Confidence            489999999999999999999999999999987653332    1    358999999999887         23358999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||....                                ..++|+.++..+++++    ++.+.+++|++||..+..
T Consensus        65 vi~~ag~~~~--------------------------------~~~~~~~~~~~l~~a~----~~~~~~~~v~~SS~~~~~  108 (221)
T 3ew7_A           65 VVDAYGISPD--------------------------------EAEKHVTSLDHLISVL----NGTVSPRLLVVGGAASLQ  108 (221)
T ss_dssp             EEECCCSSTT--------------------------------TTTSHHHHHHHHHHHH----CSCCSSEEEEECCCC---
T ss_pred             EEECCcCCcc--------------------------------ccchHHHHHHHHHHHH----HhcCCceEEEEecceEEE
Confidence            9999987211                                0345666666665554    777778999999998766


Q ss_pred             cCC
Q 035504          161 KNT  163 (174)
Q Consensus       161 ~~~  163 (174)
                      +.+
T Consensus       109 ~~~  111 (221)
T 3ew7_A          109 IDE  111 (221)
T ss_dssp             ---
T ss_pred             cCC
Confidence            544

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.75  E-value=8.3e-19  Score=135.66  Aligned_cols=121  Identities=18%  Similarity=0.152  Sum_probs=88.8

Q ss_pred             CEEEecCCCchhHHHHHHHHH--CCCeEEEEeeChhHHHHH---H---HHHhhcCCCceeEEEeecCChhhHHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLAS--NGIIVVLTARDEKRGLEA---V---EKLKHSGFDSVIFHQLDVADPATIHSLADFVR   72 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~--~g~~v~~~~r~~~~~~~~---~---~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   72 (174)
                      ++|||||+|+||.+++++|++  +|++|++++|+.......   .   .......+.++.++.+|++|.++++++     
T Consensus        12 ~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-----   86 (362)
T 3sxp_A           12 TILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL-----   86 (362)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH-----
T ss_pred             EEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh-----
Confidence            489999999999999999999  999999999965411100   0   111122233578999999999988776     


Q ss_pred             hhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEE
Q 035504           73 SQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVN  152 (174)
Q Consensus        73 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~  152 (174)
                       ...++|+||||||....                         +.++++..+++|+.++.++++++    ++.+ ++||+
T Consensus        87 -~~~~~D~vih~A~~~~~-------------------------~~~~~~~~~~~Nv~gt~~ll~aa----~~~~-~~~V~  135 (362)
T 3sxp_A           87 -EKLHFDYLFHQAAVSDT-------------------------TMLNQELVMKTNYQAFLNLLEIA----RSKK-AKVIY  135 (362)
T ss_dssp             -TTSCCSEEEECCCCCGG-------------------------GCCCHHHHHHHHTHHHHHHHHHH----HHTT-CEEEE
T ss_pred             -hccCCCEEEECCccCCc-------------------------cccCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEE
Confidence             34589999999996321                         11223456999999999999998    3444 56999


Q ss_pred             EecCC
Q 035504          153 VSSNM  157 (174)
Q Consensus       153 isS~~  157 (174)
                      +||..
T Consensus       136 ~SS~~  140 (362)
T 3sxp_A          136 ASSAG  140 (362)
T ss_dssp             EEEGG
T ss_pred             eCcHH
Confidence            99943

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.75  E-value=4.6e-19  Score=134.32  Aligned_cols=117  Identities=20%  Similarity=0.180  Sum_probs=90.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|......+   .+    ..++.++.+|++|.+++++++++.     ++|.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~----~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~   69 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV----PKGVPFFRVDLRDKEGVERAFREF-----RPTH   69 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS----CTTCCEECCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc----ccCeEEEECCCCCHHHHHHHHHhc-----CCCE
Confidence            48999999999999999999999999999885322111   11    124778899999999998888753     7899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      +||+||....                       ..+.+++...+++|+.++.++++++.    +.+.++||++||.
T Consensus        70 vi~~a~~~~~-----------------------~~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~  118 (311)
T 2p5y_A           70 VSHQAAQASV-----------------------KVSVEDPVLDFEVNLLGGLNLLEACR----QYGVEKLVFASTG  118 (311)
T ss_dssp             EEECCSCCCH-----------------------HHHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEH
T ss_pred             EEECccccCc-----------------------hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCC
Confidence            9999986321                       01234456679999999999999884    3445799999997

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.75  E-value=2.4e-18  Score=131.71  Aligned_cols=125  Identities=18%  Similarity=0.135  Sum_probs=91.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC--CceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||.+++++|+++|++|+++.|+.+...+. ..+.....  .++.++.+|++|.++++++++       ++
T Consensus         7 ~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   78 (337)
T 2c29_D            7 TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKV-KHLLDLPKAETHLTLWKADLADEGSFDEAIK-------GC   78 (337)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHH-HHHHTSTTHHHHEEEEECCTTSTTTTHHHHT-------TC
T ss_pred             EEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHH-HHHHhcccCCCeEEEEEcCCCCHHHHHHHHc-------CC
Confidence            489999999999999999999999999999876532222 11111111  247889999999999888775       68


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+|||+|+.....                      ..  +..+..+++|+.++.++++++.+..   ..++||++||..+
T Consensus        79 d~Vih~A~~~~~~----------------------~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~  131 (337)
T 2c29_D           79 TGVFHVATPMDFE----------------------SK--DPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGT  131 (337)
T ss_dssp             SEEEECCCCCCSS----------------------CS--SHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGG
T ss_pred             CEEEEeccccCCC----------------------CC--ChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhh
Confidence            9999999853110                      00  1113458999999999999986543   2479999999876


Q ss_pred             cc
Q 035504          159 KL  160 (174)
Q Consensus       159 ~~  160 (174)
                      ..
T Consensus       132 ~~  133 (337)
T 2c29_D          132 VN  133 (337)
T ss_dssp             TS
T ss_pred             cc
Confidence            54

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.74  E-value=1.4e-18  Score=133.18  Aligned_cols=136  Identities=17%  Similarity=0.084  Sum_probs=101.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-------CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-------IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-------~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      ++|||||+|+||.+++++|+++|       ++|++++|+.+...+       ....++.++.+|++|.++++++++    
T Consensus        16 ~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~----   84 (342)
T 2hrz_A           16 HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------GFSGAVDARAADLSAPGEAEKLVE----   84 (342)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------TCCSEEEEEECCTTSTTHHHHHHH----
T ss_pred             EEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------ccCCceeEEEcCCCCHHHHHHHHh----
Confidence            48999999999999999999999       899999987542211       122358889999999999887775    


Q ss_pred             hcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC-CCCeEEE
Q 035504           74 QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS-DLPRIVN  152 (174)
Q Consensus        74 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~  152 (174)
                        +++|+||||||....                        .+.+++++.+++|+.++.++++++.+..++. +.++||+
T Consensus        85 --~~~d~vih~A~~~~~------------------------~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~  138 (342)
T 2hrz_A           85 --ARPDVIFHLAAIVSG------------------------EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVF  138 (342)
T ss_dssp             --TCCSEEEECCCCCHH------------------------HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_pred             --cCCCEEEECCccCcc------------------------cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEE
Confidence              479999999986321                        1234566779999999999999986643211 1479999


Q ss_pred             EecCCCcccC-C----------CCcceeeecc
Q 035504          153 VSSNMGKLKN-T----------WQGAICYLTF  173 (174)
Q Consensus       153 isS~~~~~~~-~----------~~~~y~~~k~  173 (174)
                      +||....-+. +          ....|+.+|.
T Consensus       139 ~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~  170 (342)
T 2hrz_A          139 TSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKA  170 (342)
T ss_dssp             EEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHH
T ss_pred             eCchHhhCCCCCCCcCCCCCCCCcchHHHHHH
Confidence            9998654322 1          4567877774

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.74  E-value=1.3e-18  Score=133.19  Aligned_cols=122  Identities=16%  Similarity=0.177  Sum_probs=88.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHH--HHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL--EAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||.+++++|+++|++|+++.|+.+...  .....+..  ..++.++.+|++|.++++++++       ++
T Consensus        11 ~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~-------~~   81 (338)
T 2rh8_A           11 TACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQE--LGDLKIFRADLTDELSFEAPIA-------GC   81 (338)
T ss_dssp             EEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGG--GSCEEEEECCTTTSSSSHHHHT-------TC
T ss_pred             EEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCC--CCcEEEEecCCCChHHHHHHHc-------CC
Confidence            3899999999999999999999999999888754321  11122321  1358889999999999887775       68


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+|||+|+.....              ..          +..++.+++|+.|+.++++++.+..   +.++||++||..+
T Consensus        82 D~Vih~A~~~~~~--------------~~----------~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~  134 (338)
T 2rh8_A           82 DFVFHVATPVHFA--------------SE----------DPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAA  134 (338)
T ss_dssp             SEEEEESSCCCC---------------------------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHH
T ss_pred             CEEEEeCCccCCC--------------CC----------CcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHH
Confidence            9999999853110              00          0012358999999999999986542   2579999999764

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.74  E-value=2.5e-18  Score=131.40  Aligned_cols=138  Identities=21%  Similarity=0.138  Sum_probs=99.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++|||||+|+||.+++++|+++|  ++|++++|+... ..+..+++..  ..++.++.+|++|.+++++++.       +
T Consensus         5 ~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~-------~   75 (336)
T 2hun_A            5 KLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLED--DPRYTFVKGDVADYELVKELVR-------K   75 (336)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTT--CTTEEEEECCTTCHHHHHHHHH-------T
T ss_pred             eEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhcc--CCceEEEEcCCCCHHHHHHHhh-------C
Confidence            38999999999999999999986  899999986421 0111112211  2358899999999999888773       7


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|+||||||....                       +.+.++++..+++|+.++.++++++.+.   ...++||++||..
T Consensus        76 ~d~vih~A~~~~~-----------------------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~  129 (336)
T 2hun_A           76 VDGVVHLAAESHV-----------------------DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDE  129 (336)
T ss_dssp             CSEEEECCCCCCH-----------------------HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGG
T ss_pred             CCEEEECCCCcCh-----------------------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHH
Confidence            9999999987421                       0122334566999999999999999766   1237999999975


Q ss_pred             C--cc---------cCCCCcceeeecc
Q 035504          158 G--KL---------KNTWQGAICYLTF  173 (174)
Q Consensus       158 ~--~~---------~~~~~~~y~~~k~  173 (174)
                      .  ..         +.+....|+.+|.
T Consensus       130 vyg~~~~~~~~E~~~~~~~~~Y~~sK~  156 (336)
T 2hun_A          130 VYGDILKGSFTENDRLMPSSPYSATKA  156 (336)
T ss_dssp             GGCCCSSSCBCTTBCCCCCSHHHHHHH
T ss_pred             HHCCCCCCCcCCCCCCCCCCccHHHHH
Confidence            2  21         2234567877774

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.74  E-value=2.4e-18  Score=131.45  Aligned_cols=124  Identities=16%  Similarity=0.079  Sum_probs=93.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHH-HHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL-EAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+..... ...+.+.  ...++.++.+|++|.+++.++++..     ++|
T Consensus        16 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   88 (335)
T 1rpn_A           16 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRAVIKA-----QPQ   88 (335)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc--ccCceEEEECCCCCHHHHHHHHHHc-----CCC
Confidence            4899999999999999999999999999999754311 1122221  1235889999999999999988866     789


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~  158 (174)
                      +|||+||.....                       .+.++....+++|+.++.++++++.+.    + .++||++||...
T Consensus        89 ~Vih~A~~~~~~-----------------------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v  141 (335)
T 1rpn_A           89 EVYNLAAQSFVG-----------------------ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEM  141 (335)
T ss_dssp             EEEECCSCCCHH-----------------------HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGG
T ss_pred             EEEECccccchh-----------------------hhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHH
Confidence            999999864321                       011223456999999999999998543    3 379999999654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.74  E-value=3.5e-18  Score=129.84  Aligned_cols=125  Identities=18%  Similarity=0.199  Sum_probs=87.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-ChhHHH--HHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGL--EAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~--~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++|||||+|+||.+++++|+++|++|+++.| +.+...  ....++... ..++.++.+|++|.++++++++       +
T Consensus         3 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-------~   74 (322)
T 2p4h_X            3 RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGA-SEKLHFFNADLSNPDSFAAAIE-------G   74 (322)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTH-HHHEEECCCCTTCGGGGHHHHT-------T
T ss_pred             EEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhcc-CCceEEEecCCCCHHHHHHHHc-------C
Confidence            4899999999999999999999999999888 542211  111111100 1247788999999999888776       6


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|+|||+|+....              ...          +..++.+++|+.+++++++++.+.+   +.++||++||..
T Consensus        75 ~d~vih~A~~~~~--------------~~~----------~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~  127 (322)
T 2p4h_X           75 CVGIFHTASPIDF--------------AVS----------EPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGS  127 (322)
T ss_dssp             CSEEEECCCCC--------------------------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGG
T ss_pred             CCEEEEcCCcccC--------------CCC----------ChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHH
Confidence            8999999964210              000          0012358999999999999986542   457999999987


Q ss_pred             Ccc
Q 035504          158 GKL  160 (174)
Q Consensus       158 ~~~  160 (174)
                      +..
T Consensus       128 ~~~  130 (322)
T 2p4h_X          128 AVS  130 (322)
T ss_dssp             GTS
T ss_pred             Hcc
Confidence            654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.73  E-value=3.2e-18  Score=122.06  Aligned_cols=124  Identities=16%  Similarity=0.109  Sum_probs=93.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+|+||++++++|+++|++|++++|+.+....       ....++.++.+|++|.+++.++++       ++|+
T Consensus         5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   70 (206)
T 1hdo_A            5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------EGPRPAHVVVGDVLQAADVDKTVA-------GQDA   70 (206)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------SSCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-------ccCCceEEEEecCCCHHHHHHHHc-------CCCE
Confidence            48999999999999999999999999999998654211       112358899999999998887765       6899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|....                .+   .           .++|+.++..+++++.    +.+.++||++||.....
T Consensus        71 vi~~a~~~~~----------------~~---~-----------~~~n~~~~~~~~~~~~----~~~~~~~v~~Ss~~~~~  116 (206)
T 1hdo_A           71 VIVLLGTRND----------------LS---P-----------TTVMSEGARNIVAAMK----AHGVDKVVACTSAFLLW  116 (206)
T ss_dssp             EEECCCCTTC----------------CS---C-----------CCHHHHHHHHHHHHHH----HHTCCEEEEECCGGGTS
T ss_pred             EEECccCCCC----------------CC---c-----------cchHHHHHHHHHHHHH----HhCCCeEEEEeeeeecc
Confidence            9999986321                00   1           3478888888888774    34557999999986544


Q ss_pred             cCC----CCcceeeec
Q 035504          161 KNT----WQGAICYLT  172 (174)
Q Consensus       161 ~~~----~~~~y~~~k  172 (174)
                      ..+    ....|+.+|
T Consensus       117 ~~~~~~~~~~~y~~~K  132 (206)
T 1hdo_A          117 DPTKVPPRLQAVTDDH  132 (206)
T ss_dssp             CTTCSCGGGHHHHHHH
T ss_pred             CcccccccchhHHHHH
Confidence            333    345676665

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.73  E-value=6.2e-19  Score=131.07  Aligned_cols=125  Identities=21%  Similarity=0.134  Sum_probs=96.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+....      +    ..++.++.+|++|.+++.++++       ++|+
T Consensus         4 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~----~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   66 (267)
T 3ay3_A            4 RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA------A----EAHEEIVACDLADAQAVHDLVK-------DCDG   66 (267)
T ss_dssp             EEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC------C----CTTEEECCCCTTCHHHHHHHHT-------TCSE
T ss_pred             eEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc------c----CCCccEEEccCCCHHHHHHHHc-------CCCE
Confidence            489999999999999999999999999999976421      0    0247889999999998887775       6999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||...                .           +.+++.+++|+.++.++++++.+    .+.++||++||.....
T Consensus        67 vi~~a~~~~----------------~-----------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~  115 (267)
T 3ay3_A           67 IIHLGGVSV----------------E-----------RPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIG  115 (267)
T ss_dssp             EEECCSCCS----------------C-----------CCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGST
T ss_pred             EEECCcCCC----------------C-----------CCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhC
Confidence            999998731                0           11245699999999999999853    4558999999986553


Q ss_pred             cCC------------CCcceeeecc
Q 035504          161 KNT------------WQGAICYLTF  173 (174)
Q Consensus       161 ~~~------------~~~~y~~~k~  173 (174)
                      +.+            ....|+.+|.
T Consensus       116 ~~~~~~~~~E~~~~~~~~~Y~~sK~  140 (267)
T 3ay3_A          116 YYPRTTRIDTEVPRRPDSLYGLSKC  140 (267)
T ss_dssp             TSBTTSCBCTTSCCCCCSHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCChHHHHHH
Confidence            322            2367777764

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.73  E-value=8.9e-18  Score=132.66  Aligned_cols=119  Identities=13%  Similarity=0.076  Sum_probs=88.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh---HHHHHHHHHhhc--------CCCceeEEEeecCChhhHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK---RGLEAVEKLKHS--------GFDSVIFHQLDVADPATIHSLAD   69 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~---~~~~~~~~l~~~--------~~~~~~~~~~Dv~~~~~i~~~~~   69 (174)
                      ++|||||+|+||.+++++|+++|++|+++.|+..   ......+.+...        ...++.++.+|++|.+++.    
T Consensus        71 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~----  146 (427)
T 4f6c_A           71 NTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV----  146 (427)
T ss_dssp             EEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC----
T ss_pred             EEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC----
Confidence            4899999999999999999999999999999866   222333333222        1246999999999988877    


Q ss_pred             HHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCe
Q 035504           70 FVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPR  149 (174)
Q Consensus        70 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~  149 (174)
                          .++++|+||||||.....                          +.+...+++|+.++.++++++.+     +.++
T Consensus       147 ----~~~~~d~Vih~A~~~~~~--------------------------~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~  191 (427)
T 4f6c_A          147 ----LPENMDTIIHAGARTDHF--------------------------GDDDEFEKVNVQGTVDVIRLAQQ-----HHAR  191 (427)
T ss_dssp             ----CSSCCSEEEECCCCC---------------------------------CHHHHHHHHHHHHHHHHHH-----TTCE
T ss_pred             ----CcCCCCEEEECCcccCCC--------------------------CCHHHHHHHHHHHHHHHHHHHHh-----cCCc
Confidence                567999999999874311                          22344599999999999999965     3479


Q ss_pred             EEEEecCCC
Q 035504          150 IVNVSSNMG  158 (174)
Q Consensus       150 iv~isS~~~  158 (174)
                      ||++||...
T Consensus       192 ~v~~SS~~~  200 (427)
T 4f6c_A          192 LIYVSTISV  200 (427)
T ss_dssp             EEEEEEGGG
T ss_pred             EEEECchHh
Confidence            999999876

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.73  E-value=3.7e-18  Score=129.45  Aligned_cols=125  Identities=15%  Similarity=0.105  Sum_probs=73.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.+.           .  +  ++.+|++|.+++.++++..     ++|+
T Consensus         4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~--~--~~~~Dl~d~~~~~~~~~~~-----~~d~   63 (315)
T 2ydy_A            4 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P--K--FEQVNLLDSNAVHHIIHDF-----QPHV   63 (315)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHH-----CCSE
T ss_pred             eEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C--C--eEEecCCCHHHHHHHHHhh-----CCCE
Confidence            48999999999999999999999999999986542           0  1  6789999999999888765     7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                       .+.+++++.+++|+.++.++++++.+    .+ ++||++||.....
T Consensus        64 vih~A~~~~~~-----------------------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~~  115 (315)
T 2ydy_A           64 IVHCAAERRPD-----------------------VVENQPDAASQLNVDASGNLAKEAAA----VG-AFLIYISSDYVFD  115 (315)
T ss_dssp             EEECC------------------------------------------CHHHHHHHHHHHH----HT-CEEEEEEEGGGSC
T ss_pred             EEECCcccChh-----------------------hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchHHHcC
Confidence            99999974321                       02233455699999999999999864    23 5999999987543


Q ss_pred             c----------CCCCcceeeecc
Q 035504          161 K----------NTWQGAICYLTF  173 (174)
Q Consensus       161 ~----------~~~~~~y~~~k~  173 (174)
                      +          ......|+.+|.
T Consensus       116 ~~~~~~~E~~~~~~~~~Y~~sK~  138 (315)
T 2ydy_A          116 GTNPPYREEDIPAPLNLYGKTKL  138 (315)
T ss_dssp             SSSCSBCTTSCCCCCSHHHHHHH
T ss_pred             CCCCCCCCCCCCCCcCHHHHHHH
Confidence            3          233466777663

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.72  E-value=1.4e-17  Score=126.93  Aligned_cols=119  Identities=18%  Similarity=0.233  Sum_probs=92.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.....   +.+   . .++.++.+|++|.+++++++++     .++|+
T Consensus         3 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~---~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   70 (330)
T 2c20_A            3 SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI---T-EGAKFYNGDLRDKAFLRDVFTQ-----ENIEA   70 (330)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS---C-TTSEEEECCTTCHHHHHHHHHH-----SCEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc---C-CCcEEEECCCCCHHHHHHHHhh-----cCCCE
Confidence            4899999999999999999999999999998654221   111   1 2588899999999998888765     37999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |||+||.....                       .+.++.+..+++|+.++.++++++    ++.+.++||++||...
T Consensus        71 vih~a~~~~~~-----------------------~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~  121 (330)
T 2c20_A           71 VMHFAADSLVG-----------------------VSMEKPLQYYNNNVYGALCLLEVM----DEFKVDKFIFSSTAAT  121 (330)
T ss_dssp             EEECCCCCCHH-----------------------HHHHSHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGG
T ss_pred             EEECCcccCcc-----------------------ccccCHHHHHHHHhHHHHHHHHHH----HHcCCCEEEEeCCcee
Confidence            99999874321                       023445667999999999999987    4445579999999654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.72  E-value=1.6e-17  Score=123.44  Aligned_cols=124  Identities=19%  Similarity=0.159  Sum_probs=96.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+|+||.+++++|+ +|++|++++|+.+.        .    .+   +.+|++|.++++++++..     ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~--------~----~~---~~~Dl~~~~~~~~~~~~~-----~~d~   60 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI--------Q----GG---YKLDLTDFPRLEDFIIKK-----RPDV   60 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC--------T----TC---EECCTTSHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC--------C----CC---ceeccCCHHHHHHHHHhc-----CCCE
Confidence            58999999999999999999 58999999998632        0    11   789999999999988865     7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                       .+.+++++.+++|+.++.++++++.+    .+ ++||++||.....
T Consensus        61 vi~~a~~~~~~-----------------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~  112 (273)
T 2ggs_A           61 IINAAAMTDVD-----------------------KCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFD  112 (273)
T ss_dssp             EEECCCCCCHH-----------------------HHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSC
T ss_pred             EEECCcccChh-----------------------hhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEc
Confidence            99999974311                       12345667799999999999999853    34 5999999987654


Q ss_pred             cCC----------CCcceeeecc
Q 035504          161 KNT----------WQGAICYLTF  173 (174)
Q Consensus       161 ~~~----------~~~~y~~~k~  173 (174)
                      +.+          ....|+.+|.
T Consensus       113 ~~~~~~~e~~~~~~~~~Y~~sK~  135 (273)
T 2ggs_A          113 GEKGNYKEEDIPNPINYYGLSKL  135 (273)
T ss_dssp             SSSCSBCTTSCCCCSSHHHHHHH
T ss_pred             CCCCCcCCCCCCCCCCHHHHHHH
Confidence            432          2467877774

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.71  E-value=3.3e-17  Score=119.78  Aligned_cols=109  Identities=20%  Similarity=0.111  Sum_probs=82.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+++||++++++|+++| ++|++++|+.+...+       ....++.++.+|++|.++++++++       ++|
T Consensus        25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   90 (236)
T 3qvo_A           25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-------PYPTNSQIIMGDVLNHAALKQAMQ-------GQD   90 (236)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-------SCCTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-------cccCCcEEEEecCCCHHHHHHHhc-------CCC
Confidence            48999999999999999999999 899999998764322       122358999999999999988876       789


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||+|...                                  +       ...++.+++.|++++.++||++||..+.
T Consensus        91 ~vv~~a~~~~----------------------------------~-------~~~~~~~~~~~~~~~~~~iV~iSS~~~~  129 (236)
T 3qvo_A           91 IVYANLTGED----------------------------------L-------DIQANSVIAAMKACDVKRLIFVLSLGIY  129 (236)
T ss_dssp             EEEEECCSTT----------------------------------H-------HHHHHHHHHHHHHTTCCEEEEECCCCC-
T ss_pred             EEEEcCCCCc----------------------------------h-------hHHHHHHHHHHHHcCCCEEEEEecceec
Confidence            9999997511                                  0       0235567777788888999999998876


Q ss_pred             ccCCC
Q 035504          160 LKNTW  164 (174)
Q Consensus       160 ~~~~~  164 (174)
                      .+.+.
T Consensus       130 ~~~~~  134 (236)
T 3qvo_A          130 DEVPG  134 (236)
T ss_dssp             -----
T ss_pred             CCCCc
Confidence            55443

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.71  E-value=1e-17  Score=128.64  Aligned_cols=124  Identities=18%  Similarity=0.144  Sum_probs=89.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++|||||+|+||.+++++|+++|  ++|+..+|.....  ....+.... ..++.++.+|++|.+++.++++..     +
T Consensus        26 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   98 (346)
T 4egb_A           26 NILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG--NLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-----D   98 (346)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC--CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----T
T ss_pred             eEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc--chhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-----C
Confidence            48999999999999999999999  6777777653211  111122211 135899999999999999998864     6


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|+|||+||......                       ..++....+++|+.++.++++++.    +.+.++||++||..
T Consensus        99 ~d~Vih~A~~~~~~~-----------------------~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~v~~SS~~  151 (346)
T 4egb_A           99 VQVIVNFAAESHVDR-----------------------SIENPIPFYDTNVIGTVTLLELVK----KYPHIKLVQVSTDE  151 (346)
T ss_dssp             CCEEEECCCCC--------------------------------CHHHHHHTHHHHHHHHHHH----HSTTSEEEEEEEGG
T ss_pred             CCEEEECCcccchhh-----------------------hhhCHHHHHHHHHHHHHHHHHHHH----hcCCCEEEEeCchH
Confidence            999999999753210                       123344569999999999999884    44567899999974


Q ss_pred             C
Q 035504          158 G  158 (174)
Q Consensus       158 ~  158 (174)
                      .
T Consensus       152 v  152 (346)
T 4egb_A          152 V  152 (346)
T ss_dssp             G
T ss_pred             H
Confidence            4

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.71  E-value=8.4e-18  Score=127.53  Aligned_cols=115  Identities=20%  Similarity=0.176  Sum_probs=91.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHC--CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN--GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||.+++++|+++  |++|++++|+.....            ++.++.+|++|.+++.+++++.     ++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------------~~~~~~~D~~d~~~~~~~~~~~-----~~   63 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------------GIKFITLDVSNRDEIDRAVEKY-----SI   63 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------------TCCEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------------CceEEEecCCCHHHHHHHHhhc-----CC
Confidence            5899999999999999999998  899999998754311            3678899999999998887653     79


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+|||+||.....                        ..++.+..+++|+.++.++++++.    +.+.++||++||...
T Consensus        64 d~vih~a~~~~~~------------------------~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~SS~~~  115 (317)
T 3ajr_A           64 DAIFHLAGILSAK------------------------GEKDPALAYKVNMNGTYNILEAAK----QHRVEKVVIPSTIGV  115 (317)
T ss_dssp             CEEEECCCCCHHH------------------------HHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGG
T ss_pred             cEEEECCcccCCc------------------------cccChHHHhhhhhHHHHHHHHHHH----HcCCCEEEEecCHHH
Confidence            9999999863210                        123345669999999999999884    345579999999865


Q ss_pred             cc
Q 035504          159 KL  160 (174)
Q Consensus       159 ~~  160 (174)
                      ..
T Consensus       116 ~~  117 (317)
T 3ajr_A          116 FG  117 (317)
T ss_dssp             CC
T ss_pred             hC
Confidence            43

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.71  E-value=6.7e-18  Score=131.44  Aligned_cols=118  Identities=19%  Similarity=0.141  Sum_probs=90.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+......    ..   ..++.++.+|++|.+++.++++       ++|+
T Consensus        31 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~---~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   96 (379)
T 2c5a_A           31 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT----ED---MFCDEFHLVDLRVMENCLKVTE-------GVDH   96 (379)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC----GG---GTCSEEEECCTTSHHHHHHHHT-------TCSE
T ss_pred             eEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh----hc---cCCceEEECCCCCHHHHHHHhC-------CCCE
Confidence            48999999999999999999999999999997543211    00   1258889999999998887775       7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |||+||......                +      ..++.+..+++|+.++.++++++.    +.+.++||++||...
T Consensus        97 Vih~A~~~~~~~----------------~------~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~~V~~SS~~v  148 (379)
T 2c5a_A           97 VFNLAADMGGMG----------------F------IQSNHSVIMYNNTMISFNMIEAAR----INGIKRFFYASSACI  148 (379)
T ss_dssp             EEECCCCCCCHH----------------H------HTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEEEEGGG
T ss_pred             EEECceecCccc----------------c------cccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEeehhe
Confidence            999998743210                0      012345669999999999999984    345579999999654

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.71  E-value=6.4e-18  Score=128.12  Aligned_cols=130  Identities=20%  Similarity=0.120  Sum_probs=92.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|..+++..++......        ...++.++.+|++| +++.++++       ++|+
T Consensus         3 ~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~--------~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~   66 (313)
T 3ehe_A            3 LIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF--------VNEAARLVKADLAA-DDIKDYLK-------GAEE   66 (313)
T ss_dssp             CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG--------SCTTEEEECCCTTT-SCCHHHHT-------TCSE
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh--------cCCCcEEEECcCCh-HHHHHHhc-------CCCE
Confidence            58999999999999999999999555554444322111        12358899999999 88887765       7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +||+|+.....                       .+.++++..+++|+.++.++++++    ++.+.++||++||....-
T Consensus        67 vih~a~~~~~~-----------------------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~vyg  119 (313)
T 3ehe_A           67 VWHIAANPDVR-----------------------IGAENPDEIYRNNVLATYRLLEAM----RKAGVSRIVFTSTSTVYG  119 (313)
T ss_dssp             EEECCCCCCCC------------------------CCCCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEECCGGGGC
T ss_pred             EEECCCCCChh-----------------------hhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCchHHhC
Confidence            99999853211                       122334566999999999999886    444568999999975431


Q ss_pred             -----------cCCCCcceeeecc
Q 035504          161 -----------KNTWQGAICYLTF  173 (174)
Q Consensus       161 -----------~~~~~~~y~~~k~  173 (174)
                                 +......|+.+|.
T Consensus       120 ~~~~~~~~E~~~~~~~~~Y~~sK~  143 (313)
T 3ehe_A          120 EAKVIPTPEDYPTHPISLYGASKL  143 (313)
T ss_dssp             SCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             cCCCCCCCCCCCCCCCCHHHHHHH
Confidence                       2233466777763

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.70  E-value=2.9e-18  Score=129.80  Aligned_cols=130  Identities=20%  Similarity=0.043  Sum_probs=94.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.....+..       ..++.++.+|++|.+ +.++++       . |+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~Dl~d~~-~~~~~~-------~-d~   65 (312)
T 3ko8_A            2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-------NPSAELHVRDLKDYS-WGAGIK-------G-DV   65 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-------CTTSEEECCCTTSTT-TTTTCC-------C-SE
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-------CCCceEEECccccHH-HHhhcC-------C-CE
Confidence            4899999999999999999999999999998754322111       235889999999987 654443       3 99


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      |||+||....                       +.+.+++...+++|+.++.++++++    ++.+.++||++||....-
T Consensus        66 vih~A~~~~~-----------------------~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~vyg  118 (312)
T 3ko8_A           66 VFHFAANPEV-----------------------RLSTTEPIVHFNENVVATFNVLEWA----RQTGVRTVVFASSSTVYG  118 (312)
T ss_dssp             EEECCSSCSS-----------------------SGGGSCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGC
T ss_pred             EEECCCCCCc-----------------------hhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeCcHHHhC
Confidence            9999986321                       1122334566999999999999988    344557999999976432


Q ss_pred             c-----------CCCCcceeeecc
Q 035504          161 K-----------NTWQGAICYLTF  173 (174)
Q Consensus       161 ~-----------~~~~~~y~~~k~  173 (174)
                      .           .+....|+.+|.
T Consensus       119 ~~~~~~~~e~~~~~p~~~Y~~sK~  142 (312)
T 3ko8_A          119 DADVIPTPEEEPYKPISVYGAAKA  142 (312)
T ss_dssp             SCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCChHHHHHH
Confidence            1           123466777764

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.70  E-value=1.5e-17  Score=127.31  Aligned_cols=137  Identities=20%  Similarity=0.115  Sum_probs=97.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHC---C---CeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh
Q 035504            1 YAVVTGANKGIGYETVRQLASN---G---IIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~---g---~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      ++|||||+|+||.+++++|+++   |   ++|++++|+... ..+..+++.  ...++.++.+|++|.+++++++     
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~-----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD--ADPRLRFVHGDIRDAGLLAREL-----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT--TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc--cCCCeEEEEcCCCCHHHHHHHh-----
Confidence            4899999999999999999997   8   999999986421 011111121  1235889999999998887766     


Q ss_pred             hcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEE
Q 035504           74 QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNV  153 (174)
Q Consensus        74 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~i  153 (174)
                        .++|+|||+||.....                       .+.++++..+++|+.++.++++++.+.    +.++||++
T Consensus        75 --~~~d~Vih~A~~~~~~-----------------------~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~  125 (337)
T 1r6d_A           75 --RGVDAIVHFAAESHVD-----------------------RSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHV  125 (337)
T ss_dssp             --TTCCEEEECCSCCCHH-----------------------HHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEE
T ss_pred             --cCCCEEEECCCccCch-----------------------hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEe
Confidence              4899999999874311                       112233456999999999999999654    34799999


Q ss_pred             ecCCCcc-----------cCCCCcceeeecc
Q 035504          154 SSNMGKL-----------KNTWQGAICYLTF  173 (174)
Q Consensus       154 sS~~~~~-----------~~~~~~~y~~~k~  173 (174)
                      ||....-           +.+....|+.+|.
T Consensus       126 SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~  156 (337)
T 1r6d_A          126 STNQVYGSIDSGSWTESSPLEPNSPYAASKA  156 (337)
T ss_dssp             EEGGGGCCCSSSCBCTTSCCCCCSHHHHHHH
T ss_pred             cchHHhCCCCCCCCCCCCCCCCCCchHHHHH
Confidence            9964321           1223467777764

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.70  E-value=2e-17  Score=127.00  Aligned_cols=119  Identities=24%  Similarity=0.213  Sum_probs=89.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHC--CCeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASN--GIIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~--g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++|||||+|+||.+++++|+++  |++|++++|+... ..+.   +......++.++.+|++|.+++.++++       +
T Consensus         6 ~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   75 (348)
T 1oc2_A            6 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKAN---LEAILGDRVELVVGDIADAELVDKLAA-------K   75 (348)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG---TGGGCSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             EEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhH---HhhhccCCeEEEECCCCCHHHHHHHhh-------c
Confidence            4899999999999999999998  8999999986421 1111   111112458899999999998887776       5


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      +|+||||||.....                       .+.++++..+++|+.++.++++++.+.    + ++||++||..
T Consensus        76 ~d~vih~A~~~~~~-----------------------~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~  127 (348)
T 1oc2_A           76 ADAIVHYAAESHND-----------------------NSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDE  127 (348)
T ss_dssp             CSEEEECCSCCCHH-----------------------HHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGG
T ss_pred             CCEEEECCcccCcc-----------------------chhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccc
Confidence            69999999874310                       112334566999999999999999654    3 4999999975

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.70  E-value=1.4e-17  Score=125.07  Aligned_cols=118  Identities=22%  Similarity=0.248  Sum_probs=92.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+                      .+|++|.+++.+++++.     ++|+
T Consensus        14 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~Dl~d~~~~~~~~~~~-----~~d~   66 (292)
T 1vl0_A           14 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------DLDITNVLAVNKFFNEK-----KPNV   66 (292)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------TCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------cCCCCCHHHHHHHHHhc-----CCCE
Confidence            48999999999999999999999999999886                      37999999998888765     7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||....                       +.+.+++++.+++|+.++.++++++.+    .+ .+||++||....-
T Consensus        67 vih~A~~~~~-----------------------~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~-~~iv~~SS~~v~~  118 (292)
T 1vl0_A           67 VINCAAHTAV-----------------------DKCEEQYDLAYKINAIGPKNLAAAAYS----VG-AEIVQISTDYVFD  118 (292)
T ss_dssp             EEECCCCCCH-----------------------HHHHHCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSC
T ss_pred             EEECCccCCH-----------------------HHHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEechHHeEC
Confidence            9999987321                       112344567799999999999999854    34 3999999975433


Q ss_pred             cCC-----------CCcceeeecc
Q 035504          161 KNT-----------WQGAICYLTF  173 (174)
Q Consensus       161 ~~~-----------~~~~y~~~k~  173 (174)
                      +.+           ....|+.+|.
T Consensus       119 ~~~~~~~~E~~~~~~~~~Y~~sK~  142 (292)
T 1vl0_A          119 GEAKEPITEFDEVNPQSAYGKTKL  142 (292)
T ss_dssp             SCCSSCBCTTSCCCCCSHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCccHHHHHHH
Confidence            221           2456777664

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.70  E-value=1.6e-17  Score=125.72  Aligned_cols=117  Identities=16%  Similarity=0.090  Sum_probs=91.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHC--CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN--GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||.+++++|+++  |++|++++|+.... +.    .    .++.++.+|++|.+++++++++.     ++
T Consensus         4 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~----~----~~~~~~~~D~~d~~~~~~~~~~~-----~~   69 (312)
T 2yy7_A            4 KILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT-DV----V----NSGPFEVVNALDFNQIEHLVEVH-----KI   69 (312)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC-HH----H----HSSCEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             eEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc-cc----c----CCCceEEecCCCHHHHHHHHhhc-----CC
Confidence            5899999999999999999999  89999999975542 11    1    13678899999999998887754     79


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++||+||.....                        ..++.+..+++|+.++.++++++.    +.+.++||++||...
T Consensus        70 d~vih~a~~~~~~------------------------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~  121 (312)
T 2yy7_A           70 TDIYLMAALLSAT------------------------AEKNPAFAWDLNMNSLFHVLNLAK----AKKIKKIFWPSSIAV  121 (312)
T ss_dssp             CEEEECCCCCHHH------------------------HHHCHHHHHHHHHHHHHHHHHHHH----TTSCSEEECCEEGGG
T ss_pred             CEEEECCccCCCc------------------------hhhChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHHH
Confidence            9999999863211                        113345669999999999999884    445579999999765


Q ss_pred             c
Q 035504          159 K  159 (174)
Q Consensus       159 ~  159 (174)
                      .
T Consensus       122 ~  122 (312)
T 2yy7_A          122 F  122 (312)
T ss_dssp             C
T ss_pred             h
Confidence            4

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.70  E-value=2.1e-17  Score=137.88  Aligned_cols=126  Identities=21%  Similarity=0.274  Sum_probs=93.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.....+..+.+......++.++.+|++|.+++++++++.     ++|+
T Consensus        13 ~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-----~~D~   87 (699)
T 1z45_A           13 IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KIDS   87 (699)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-----CCCE
Confidence            48999999999999999999999999999986543222223332222235888999999999998887653     7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      ||||||......                       ..+...+.+++|+.++.++++++    ++.+.++||++||...
T Consensus        88 Vih~A~~~~~~~-----------------------~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~~iV~~SS~~v  138 (699)
T 1z45_A           88 VIHFAGLKAVGE-----------------------STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATV  138 (699)
T ss_dssp             EEECCSCCCHHH-----------------------HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGG
T ss_pred             EEECCcccCcCc-----------------------cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECcHHH
Confidence            999998743210                       01112346899999999998876    4445689999999754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.68  E-value=2.9e-17  Score=127.76  Aligned_cols=118  Identities=19%  Similarity=0.188  Sum_probs=90.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|+||.+++++|+++| ++|++++|+.....+   .+.  ...++.++.+|++|.++++++++       ++|
T Consensus        34 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~--~~~~v~~~~~Dl~d~~~l~~~~~-------~~d  101 (377)
T 2q1s_A           34 NVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP--DHPAVRFSETSITDDALLASLQD-------EYD  101 (377)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC--CCTTEEEECSCTTCHHHHHHCCS-------CCS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc--CCCceEEEECCCCCHHHHHHHhh-------CCC
Confidence            38999999999999999999999 999999997543211   111  12358899999999988776554       899


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC-CCCeEEEEecCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS-DLPRIVNVSSNM  157 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~g~iv~isS~~  157 (174)
                      +|||+||.....                       .+.++.+..+++|+.++.++++++    ++. +.++||++||..
T Consensus       102 ~Vih~A~~~~~~-----------------------~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~  153 (377)
T 2q1s_A          102 YVFHLATYHGNQ-----------------------SSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGC  153 (377)
T ss_dssp             EEEECCCCSCHH-----------------------HHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC-
T ss_pred             EEEECCCccCch-----------------------hhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHH
Confidence            999999874321                       122344567999999999999988    444 557999999975

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.68  E-value=1.8e-17  Score=128.41  Aligned_cols=116  Identities=12%  Similarity=0.113  Sum_probs=90.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecC-ChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA-DPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||.+++++|+++ |++|++++|+.+...+.    ..  ..++.++.+|++ |.+.+.++++       ++
T Consensus        26 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~~--~~~v~~~~~Dl~~d~~~~~~~~~-------~~   92 (372)
T 3slg_A           26 KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDL----VK--HERMHFFEGDITINKEWVEYHVK-------KC   92 (372)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGG----GG--STTEEEEECCTTTCHHHHHHHHH-------HC
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhh----cc--CCCeEEEeCccCCCHHHHHHHhc-------cC
Confidence            4899999999999999999998 99999999986543222    11  135999999999 9998888876       68


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |+|||+||...+..                       ..++..+.+++|+.++.++++++.    +.+ .++|++||..
T Consensus        93 d~Vih~A~~~~~~~-----------------------~~~~~~~~~~~nv~~~~~ll~a~~----~~~-~~~v~~SS~~  143 (372)
T 3slg_A           93 DVILPLVAIATPAT-----------------------YVKQPLRVFELDFEANLPIVRSAV----KYG-KHLVFPSTSE  143 (372)
T ss_dssp             SEEEECBCCCCHHH-----------------------HHHCHHHHHHHHTTTTHHHHHHHH----HHT-CEEEEECCGG
T ss_pred             CEEEEcCccccHHH-----------------------HhhCHHHHHHHHHHHHHHHHHHHH----HhC-CcEEEeCcHH
Confidence            99999999754210                       122334668999999999998884    445 7999999953

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.67  E-value=9.8e-17  Score=122.81  Aligned_cols=117  Identities=15%  Similarity=0.040  Sum_probs=88.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCCh-hhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP-ATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||.+++++|+++ |++|++++|+.....+.    ..  ..++.++.+|++|. +.++++++       ++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~~--~~~~~~~~~D~~~~~~~~~~~~~-------~~   68 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----LN--HPHFHFVEGDISIHSEWIEYHVK-------KC   68 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG----TT--CTTEEEEECCTTTCSHHHHHHHH-------HC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh----hc--CCCeEEEeccccCcHHHHHhhcc-------CC
Confidence            4899999999999999999998 89999999986543221    11  13588999999984 55666665       58


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+|||+||...+..                       ..++....+++|+.++.++++++.    +.+ ++||++||...
T Consensus        69 d~vih~A~~~~~~~-----------------------~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~SS~~v  120 (345)
T 2bll_A           69 DVVLPLVAIATPIE-----------------------YTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEV  120 (345)
T ss_dssp             SEEEECBCCCCHHH-----------------------HHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGG
T ss_pred             CEEEEcccccCccc-----------------------hhcCHHHHHHHHHHHHHHHHHHHH----HhC-CeEEEEecHHH
Confidence            99999998743210                       112345568999999999998884    344 79999999654

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.67  E-value=4.9e-16  Score=124.49  Aligned_cols=118  Identities=20%  Similarity=0.259  Sum_probs=87.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHC---CCeEEEEeeChhHHHHHHHHHhh---------------cCCCceeEEEeecC---
Q 035504            1 YAVVTGANKGIGYETVRQLASN---GIIVVLTARDEKRGLEAVEKLKH---------------SGFDSVIFHQLDVA---   59 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~---g~~v~~~~r~~~~~~~~~~~l~~---------------~~~~~~~~~~~Dv~---   59 (174)
                      ++|||||+|+||.+++++|+++   |++|+++.|+.... +..+.+.+               ....++.++.+|++   
T Consensus        75 ~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~  153 (478)
T 4dqv_A           75 TVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE-DARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPD  153 (478)
T ss_dssp             EEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH-HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGG
T ss_pred             EEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH-HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcc
Confidence            4899999999999999999999   89999999976532 22222211               12246999999998   


Q ss_pred             ---ChhhHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHH
Q 035504           60 ---DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCE  136 (174)
Q Consensus        60 ---~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  136 (174)
                         |.++++++++       ++|+||||||....                ..+.           +.+++|+.++.++++
T Consensus       154 ~gld~~~~~~~~~-------~~D~Vih~Aa~~~~----------------~~~~-----------~~~~~Nv~gt~~ll~  199 (478)
T 4dqv_A          154 LGLDQPMWRRLAE-------TVDLIVDSAAMVNA----------------FPYH-----------ELFGPNVAGTAELIR  199 (478)
T ss_dssp             GGCCHHHHHHHHH-------HCCEEEECCSSCSB----------------SSCC-----------EEHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHc-------CCCEEEECccccCC----------------cCHH-----------HHHHHHHHHHHHHHH
Confidence               4455665554       68999999997532                1122           238999999999999


Q ss_pred             hhhhhccCCCCCeEEEEecCC
Q 035504          137 VLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus       137 ~~~~~m~~~~~g~iv~isS~~  157 (174)
                      ++    .+.+.++||++||..
T Consensus       200 aa----~~~~~~~~V~iSS~~  216 (478)
T 4dqv_A          200 IA----LTTKLKPFTYVSTAD  216 (478)
T ss_dssp             HH----TSSSCCCEEEEEEGG
T ss_pred             HH----HhCCCCeEEEEeehh
Confidence            88    445557999999964

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.67  E-value=9e-18  Score=120.66  Aligned_cols=122  Identities=11%  Similarity=-0.078  Sum_probs=93.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||+|+||.+++++|+++|+  +|++++|+...          . ..++.++.+|++|.+++.+++         +
T Consensus         7 ~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~-~~~~~~~~~D~~~~~~~~~~~---------~   66 (215)
T 2a35_A            7 RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E-HPRLDNPVGPLAELLPQLDGS---------I   66 (215)
T ss_dssp             EEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C-CTTEECCBSCHHHHGGGCCSC---------C
T ss_pred             eEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c-CCCceEEeccccCHHHHHHhh---------h
Confidence            489999999999999999999998  99999998653          0 135888899999888766543         8


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||+|.....                         .+++++.+++|+.++..+++++.    +.+.++||++||...
T Consensus        67 d~vi~~a~~~~~~-------------------------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~  117 (215)
T 2a35_A           67 DTAFCCLGTTIKE-------------------------AGSEEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGA  117 (215)
T ss_dssp             SEEEECCCCCHHH-------------------------HSSHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTC
T ss_pred             cEEEECeeecccc-------------------------CCCHHHHHHhhHHHHHHHHHHHH----HcCCCEEEEECCccc
Confidence            9999999873210                         12244568999999999999884    345579999999877


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+  ....|+.+|.
T Consensus       118 ~~~--~~~~y~~sK~  130 (215)
T 2a35_A          118 DAK--SSIFYNRVKG  130 (215)
T ss_dssp             CTT--CSSHHHHHHH
T ss_pred             CCC--CccHHHHHHH
Confidence            542  3457777764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.64  E-value=1.3e-16  Score=123.03  Aligned_cols=119  Identities=16%  Similarity=0.152  Sum_probs=88.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|+||.+++++|+++| ++|+++.|+.....  .+.+   .  ++. +.+|++|.+.++++++.  ..++++|
T Consensus        48 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~---~--~~~-~~~d~~~~~~~~~~~~~--~~~~~~d  117 (357)
T 2x6t_A           48 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL---V--DLN-IADYMDKEDFLIQIMAG--EEFGDVE  117 (357)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT---T--TSC-CSEEEEHHHHHHHHHTT--CCCSSCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc---c--Cce-EeeecCcHHHHHHHHhh--cccCCCC
Confidence            48999999999999999999999 89999998754311  1111   1  133 67899998888777653  2356899


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +|||+||....                         +.++++..+++|+.++.++++++.+    .+. +||++||....
T Consensus       118 ~Vih~A~~~~~-------------------------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~  167 (357)
T 2x6t_A          118 AIFHEGACSST-------------------------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATY  167 (357)
T ss_dssp             EEEECCSCCCT-------------------------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGG
T ss_pred             EEEECCcccCC-------------------------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHh
Confidence            99999987432                         0112345689999999999999854    344 99999998653

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.64  E-value=7.2e-16  Score=116.76  Aligned_cols=109  Identities=16%  Similarity=0.156  Sum_probs=85.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+... .+    +.     ++.++.+|++ .+++.++++       ++|+
T Consensus         4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~----~~-----~~~~~~~Dl~-~~~~~~~~~-------~~d~   65 (311)
T 3m2p_A            4 KIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA----IN-----DYEYRVSDYT-LEDLINQLN-------DVDA   65 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------CCEEEECCCC-HHHHHHHTT-------TCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc----CC-----ceEEEEcccc-HHHHHHhhc-------CCCE
Confidence            48999999999999999999999999999998332 22    11     5889999999 888777665       8999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |||+||.....                .+           ...+++|+.++.++++++    ++.+.++||++||...
T Consensus        66 Vih~a~~~~~~----------------~~-----------~~~~~~n~~~~~~ll~a~----~~~~~~r~v~~SS~~v  112 (311)
T 3m2p_A           66 VVHLAATRGSQ----------------GK-----------ISEFHDNEILTQNLYDAC----YENNISNIVYASTISA  112 (311)
T ss_dssp             EEECCCCCCSS----------------SC-----------GGGTHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGG
T ss_pred             EEEccccCCCC----------------Ch-----------HHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHH
Confidence            99999874321                11           233899999999999988    4455678999999543

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.63  E-value=2.1e-16  Score=118.86  Aligned_cols=107  Identities=18%  Similarity=0.143  Sum_probs=84.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+ +|++|++++|+..                  ++.+|++|.+++.++++..     ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------~~~~D~~d~~~~~~~~~~~-----~~d~   57 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------EFCGDFSNPKGVAETVRKL-----RPDV   57 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------SSCCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------cccccCCCHHHHHHHHHhc-----CCCE
Confidence            48999999999999999999 8999999998751                  2478999999998888755     6999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||+||......                       ..++.+..+++|+.++.++++++    ++.+ .++|++||....
T Consensus        58 vih~a~~~~~~~-----------------------~~~~~~~~~~~n~~~~~~l~~a~----~~~~-~~~v~~SS~~vy  108 (299)
T 1n2s_A           58 IVNAAAHTAVDK-----------------------AESEPELAQLLNATSVEAIAKAA----NETG-AWVVHYSTDYVF  108 (299)
T ss_dssp             EEECCCCCCHHH-----------------------HTTCHHHHHHHHTHHHHHHHHHH----TTTT-CEEEEEEEGGGS
T ss_pred             EEECcccCCHhh-----------------------hhcCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEecccEE
Confidence            999998743210                       11223456899999999999998    4444 489999997543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.63  E-value=1.2e-16  Score=119.68  Aligned_cols=104  Identities=15%  Similarity=0.214  Sum_probs=84.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|.                      ++|++|.+++.+++++.     ++|+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~-----~~d~   59 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDITNISQVQQVVQEI-----RPHI   59 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCCCCHHHHHHHHHhc-----CCCE
Confidence            48999999999999999999999999999982                      37999999999988876     7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      |||+||......                       ..++....+++|+.++.++++++.+    .+ .++|++||....
T Consensus        60 vi~~a~~~~~~~-----------------------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~vy  110 (287)
T 3sc6_A           60 IIHCAAYTKVDQ-----------------------AEKERDLAYVINAIGARNVAVASQL----VG-AKLVYISTDYVF  110 (287)
T ss_dssp             EEECCCCCCHHH-----------------------HTTCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGS
T ss_pred             EEECCcccChHH-----------------------HhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchhhhc
Confidence            999999754210                       1123456699999999999999843    33 489999997543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.62  E-value=1.2e-15  Score=114.06  Aligned_cols=118  Identities=10%  Similarity=0.095  Sum_probs=90.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHC--CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN--GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||.+++++|+++  |++|++++|+.+...+..    .   .++.++.+|++|.+++.++++       ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~---~~~~~~~~D~~d~~~l~~~~~-------~~   67 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D---QGVEVRHGDYNQPESLQKAFA-------GV   67 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H---TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h---cCCeEEEeccCCHHHHHHHHh-------cC
Confidence            5899999999999999999999  999999999865443321    1   247889999999988887765       68


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++||+||.. .                   .             -++|+.++.++++++    ++.+.++||++||...
T Consensus        68 d~vi~~a~~~-~-------------------~-------------~~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~  110 (287)
T 2jl1_A           68 SKLLFISGPH-Y-------------------D-------------NTLLIVQHANVVKAA----RDAGVKHIAYTGYAFA  110 (287)
T ss_dssp             SEEEECCCCC-S-------------------C-------------HHHHHHHHHHHHHHH----HHTTCSEEEEEEETTG
T ss_pred             CEEEEcCCCC-c-------------------C-------------chHHHHHHHHHHHHH----HHcCCCEEEEECCCCC
Confidence            9999999851 0                   0             057888988888887    4455679999999876


Q ss_pred             cccCCCCcceeeec
Q 035504          159 KLKNTWQGAICYLT  172 (174)
Q Consensus       159 ~~~~~~~~~y~~~k  172 (174)
                      . +  ....|+.+|
T Consensus       111 ~-~--~~~~y~~~K  121 (287)
T 2jl1_A          111 E-E--SIIPLAHVH  121 (287)
T ss_dssp             G-G--CCSTHHHHH
T ss_pred             C-C--CCCchHHHH
Confidence            4 2  224666665

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.62  E-value=4.2e-16  Score=116.76  Aligned_cols=108  Identities=23%  Similarity=0.183  Sum_probs=84.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||| +|+||.+++++|+++|++|++++|+.+..           ..++.++.+|++|.+++.++++      +++|+
T Consensus         5 ~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~------~~~d~   66 (286)
T 3gpi_A            5 KILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------PAGVQTLIADVTRPDTLASIVH------LRPEI   66 (286)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------CTTCCEEECCTTCGGGCTTGGG------GCCSE
T ss_pred             cEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCCceEEccCCChHHHHHhhc------CCCCE
Confidence            589999 59999999999999999999999986531           1358899999999998877664      35999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |||+||....                            +....+++|+.++.++++++    ++.+.++||++||...
T Consensus        67 vih~a~~~~~----------------------------~~~~~~~~n~~~~~~ll~a~----~~~~~~~~v~~SS~~v  112 (286)
T 3gpi_A           67 LVYCVAASEY----------------------------SDEHYRLSYVEGLRNTLSAL----EGAPLQHVFFVSSTGV  112 (286)
T ss_dssp             EEECHHHHHH----------------------------C-----CCSHHHHHHHHHHT----TTSCCCEEEEEEEGGG
T ss_pred             EEEeCCCCCC----------------------------CHHHHHHHHHHHHHHHHHHH----hhCCCCEEEEEcccEE
Confidence            9999986321                            11234789999999999888    4556689999999754

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.62  E-value=1.1e-15  Score=114.28  Aligned_cols=116  Identities=13%  Similarity=0.108  Sum_probs=84.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHC--CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN--GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++||||+|+||.+++++|+++  |++|++++|+.+...+..    .   .++.++.+|++|.+++.++++       ++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~---~~~~~~~~D~~d~~~~~~~~~-------~~   66 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A---QGITVRQADYGDEAALTSALQ-------GV   66 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H---TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c---CCCeEEEcCCCCHHHHHHHHh-------CC
Confidence            5899999999999999999998  999999999865433321    1   247889999999988877665       68


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++||+||..                                   ...|+.++.++++++    ++.+.++||++||...
T Consensus        67 d~vi~~a~~~-----------------------------------~~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~  107 (286)
T 2zcu_A           67 EKLLLISSSE-----------------------------------VGQRAPQHRNVINAA----KAAGVKFIAYTSLLHA  107 (286)
T ss_dssp             SEEEECC-------------------------------------------CHHHHHHHHH----HHHTCCEEEEEEETTT
T ss_pred             CEEEEeCCCC-----------------------------------chHHHHHHHHHHHHH----HHcCCCEEEEECCCCC
Confidence            9999999851                                   012556666666666    4445679999999876


Q ss_pred             cccCCCCcceeeec
Q 035504          159 KLKNTWQGAICYLT  172 (174)
Q Consensus       159 ~~~~~~~~~y~~~k  172 (174)
                      . +  ....|+.+|
T Consensus       108 ~-~--~~~~y~~sK  118 (286)
T 2zcu_A          108 D-T--SPLGLADEH  118 (286)
T ss_dssp             T-T--CCSTTHHHH
T ss_pred             C-C--CcchhHHHH
Confidence            5 2  234676665

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.61  E-value=7.2e-16  Score=117.04  Aligned_cols=107  Identities=15%  Similarity=0.194  Sum_probs=84.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|+++.|+.                     .+|++|.+++.+++++.     ++|+
T Consensus         5 ~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~-----~~d~   58 (321)
T 1e6u_A            5 RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASE-----RIDQ   58 (321)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------cCCccCHHHHHHHHHhc-----CCCE
Confidence            489999999999999999999999998887752                     26999999998888765     7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      |||+||.....                      ....++....+++|+.++.++++++.    +.+.+++|++||....
T Consensus        59 vih~a~~~~~~----------------------~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~vy  111 (321)
T 1e6u_A           59 VYLAAAKVGGI----------------------VANNTYPADFIYQNMMIESNIIHAAH----QNDVNKLLFLGSSCIY  111 (321)
T ss_dssp             EEECCCCCCCH----------------------HHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGGS
T ss_pred             EEEcCeecCCc----------------------chhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEccHHHc
Confidence            99999874210                      00122345668999999999999884    3445799999997543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.60  E-value=3.9e-15  Score=111.54  Aligned_cols=109  Identities=15%  Similarity=0.084  Sum_probs=83.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|+||.+++++|.++ |++|+++.|+.+...+    +.   ..++.++.+|++|.+++.++++       ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~----~~---~~~v~~~~~D~~d~~~l~~~~~-------~~d   67 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD----DW---RGKVSVRQLDYFNQESMVEAFK-------GMD   67 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG----GG---BTTBEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH----hh---hCCCEEEEcCCCCHHHHHHHHh-------CCC
Confidence            5899999999999999999998 9999999998764322    11   1358999999999998887765       799


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++||++|....                                 ...|+.+...+++++    ++.+.++||++||....
T Consensus        68 ~vi~~a~~~~~---------------------------------~~~~~~~~~~l~~aa----~~~gv~~iv~~Ss~~~~  110 (289)
T 3e48_A           68 TVVFIPSIIHP---------------------------------SFKRIPEVENLVYAA----KQSGVAHIIFIGYYADQ  110 (289)
T ss_dssp             EEEECCCCCCS---------------------------------HHHHHHHHHHHHHHH----HHTTCCEEEEEEESCCS
T ss_pred             EEEEeCCCCcc---------------------------------chhhHHHHHHHHHHH----HHcCCCEEEEEcccCCC
Confidence            99999986321                                 234666665655555    66667899999997644


Q ss_pred             c
Q 035504          160 L  160 (174)
Q Consensus       160 ~  160 (174)
                      .
T Consensus       111 ~  111 (289)
T 3e48_A          111 H  111 (289)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.60  E-value=5.9e-16  Score=116.83  Aligned_cols=118  Identities=15%  Similarity=0.155  Sum_probs=85.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|+||.+++++|+++| ++|+++.|+.....  ...+.     ++. +.+|++|.+.++++++..  .++++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~-----~~~-~~~d~~~~~~~~~~~~~~--~~~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV-----DLN-IADYMDKEDFLIQIMAGE--EFGDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH-----TSC-CSEEEEHHHHHHHHHTTC--CCSSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC-----cce-eccccccHHHHHHHHhcc--ccCCCc
Confidence            58999999999999999999999 89999998754321  11121     122 678999888777665411  123699


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      +|||+||.....                         .++.+..+++|+.++.++++++.+    .+. ++|++||...
T Consensus        71 ~vi~~a~~~~~~-------------------------~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v  119 (310)
T 1eq2_A           71 AIFHEGACSSTT-------------------------EWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAAT  119 (310)
T ss_dssp             EEEECCSCCCTT-------------------------CCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGG
T ss_pred             EEEECcccccCc-------------------------ccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHH
Confidence            999999874320                         012245589999999999999843    345 9999999754

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.59  E-value=1.8e-15  Score=122.02  Aligned_cols=119  Identities=13%  Similarity=0.080  Sum_probs=88.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH---HHHHHHHHhh--------cCCCceeEEEeecCChhhHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR---GLEAVEKLKH--------SGFDSVIFHQLDVADPATIHSLAD   69 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~---~~~~~~~l~~--------~~~~~~~~~~~Dv~~~~~i~~~~~   69 (174)
                      ++|||||+|+||.+++++|.++|++|+++.|+...   ..+..+.+..        ....++.++.+|++|.+++.    
T Consensus       152 ~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~----  227 (508)
T 4f6l_B          152 NTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV----  227 (508)
T ss_dssp             EEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC----
T ss_pred             eEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC----
Confidence            48999999999999999999999999999998653   2222222221        12346999999999988776    


Q ss_pred             HHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCe
Q 035504           70 FVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPR  149 (174)
Q Consensus        70 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~  149 (174)
                          ...++|+|||||+.....                          ......+++|+.++.++++++.+     ...+
T Consensus       228 ----~~~~~D~Vih~Aa~~~~~--------------------------~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~  272 (508)
T 4f6l_B          228 ----LPENMDTIIHAGARTDHF--------------------------GDDDEFEKVNVQGTVDVIRLAQQ-----HHAR  272 (508)
T ss_dssp             ----CSSCCSEEEECCCC----------------------------------CCHHHHHHHHHHHHHHHHT-----TTCE
T ss_pred             ----CccCCCEEEECCceecCC--------------------------CCHHHHhhhHHHHHHHHHHHHHh-----CCCc
Confidence                456899999999874311                          11233489999999999999853     3479


Q ss_pred             EEEEecCCC
Q 035504          150 IVNVSSNMG  158 (174)
Q Consensus       150 iv~isS~~~  158 (174)
                      +||+||...
T Consensus       273 ~v~iSS~~v  281 (508)
T 4f6l_B          273 LIYVSTISV  281 (508)
T ss_dssp             EEEEEESCT
T ss_pred             EEEeCChhh
Confidence            999999876

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.58  E-value=9.8e-16  Score=117.50  Aligned_cols=116  Identities=19%  Similarity=0.163  Sum_probs=83.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+.....+..+.+.  ...++.++.+|+.+..            +.++|+
T Consensus        29 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~~d~   94 (343)
T 2b69_A           29 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPL------------YIEVDQ   94 (343)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCC------------CCCCSE
T ss_pred             EEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc--cCCceEEEeCccCChh------------hcCCCE
Confidence            48999999999999999999999999999986432111111111  1235889999998753            457999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |||+||......                       ..++....+++|+.++.++++++.+    .+ .++|++||...
T Consensus        95 vih~A~~~~~~~-----------------------~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v  144 (343)
T 2b69_A           95 IYHLASPASPPN-----------------------YMYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEV  144 (343)
T ss_dssp             EEECCSCCSHHH-----------------------HTTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGG
T ss_pred             EEECccccCchh-----------------------hhhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHH
Confidence            999998743210                       0012235689999999999998853    33 49999999653

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.58  E-value=2e-15  Score=125.28  Aligned_cols=117  Identities=15%  Similarity=0.067  Sum_probs=88.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhh-HHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT-IHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~-i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|+||.+++++|+++ |++|++++|+.....+    +.  ...++.++.+|++|.++ ++++++       ++
T Consensus       317 ~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~----~~--~~~~v~~v~~Dl~d~~~~~~~~~~-------~~  383 (660)
T 1z7e_A          317 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FL--NHPHFHFVEGDISIHSEWIEYHVK-------KC  383 (660)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG----GT--TCTTEEEEECCTTTCHHHHHHHHH-------HC
T ss_pred             eEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh----hc--cCCceEEEECCCCCcHHHHHHhhc-------CC
Confidence            4799999999999999999998 8999999997654221    11  12358899999999765 555554       68


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||...+..                       ..++..+.+++|+.++.++++++.+    .+ +++|++||...
T Consensus       384 D~Vih~Aa~~~~~~-----------------------~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~v  435 (660)
T 1z7e_A          384 DVVLPLVAIATPIE-----------------------YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEV  435 (660)
T ss_dssp             SEEEECCCCCCTHH-----------------------HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGG
T ss_pred             CEEEECceecCccc-----------------------cccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHH
Confidence            99999998743210                       1123456799999999999988843    44 79999999754

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.57  E-value=3.8e-15  Score=112.20  Aligned_cols=124  Identities=15%  Similarity=0.093  Sum_probs=85.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||+|+||.+++++|+++| ++|+++.|+.+...  .+.+..   .++.++.+|++|.+++.++++       ++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~--~~~l~~---~~~~~~~~D~~d~~~l~~~~~-------~~d   74 (299)
T 2wm3_A            7 LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA--AKELRL---QGAEVVQGDQDDQVIMELALN-------GAY   74 (299)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH--HHHHHH---TTCEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             EEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH--HHHHHH---CCCEEEEecCCCHHHHHHHHh-------cCC
Confidence            48999999999999999999998 99999999865432  122322   247889999999999887775       699


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      .+|||+|.....                               ..+.|+.+...+++++    ++.+.++||++|+ .+.
T Consensus        75 ~vi~~a~~~~~~-------------------------------~~~~~~~~~~~~~~aa----~~~gv~~iv~~S~-~~~  118 (299)
T 2wm3_A           75 ATFIVTNYWESC-------------------------------SQEQEVKQGKLLADLA----RRLGLHYVVYSGL-ENI  118 (299)
T ss_dssp             EEEECCCHHHHT-------------------------------CHHHHHHHHHHHHHHH----HHHTCSEEEECCC-CCH
T ss_pred             EEEEeCCCCccc-------------------------------cchHHHHHHHHHHHHH----HHcCCCEEEEEcC-ccc
Confidence            999999853110                               0345555555555554    5556689999555 443


Q ss_pred             ccCC---CCcceeeec
Q 035504          160 LKNT---WQGAICYLT  172 (174)
Q Consensus       160 ~~~~---~~~~y~~~k  172 (174)
                      .+.+   ....|..+|
T Consensus       119 ~~~~~~~~~~~y~~sK  134 (299)
T 2wm3_A          119 KKLTAGRLAAAHFDGK  134 (299)
T ss_dssp             HHHTTTSCCCHHHHHH
T ss_pred             cccCCCcccCchhhHH
Confidence            3221   234565555

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.57  E-value=1.5e-14  Score=111.76  Aligned_cols=123  Identities=15%  Similarity=0.080  Sum_probs=88.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEee-cCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLD-VADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-v~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++||||+|+||.+++++|+++|++|+++.|+.+...  .+.+...  .++.++.+| ++|.+++.++++       ++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~--~~v~~v~~D~l~d~~~l~~~~~-------~~d   75 (352)
T 1xgk_A            7 TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI--PNVTLFQGPLLNNVPLMDTLFE-------GAH   75 (352)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS--TTEEEEESCCTTCHHHHHHHHT-------TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhc--CCcEEEECCccCCHHHHHHHHh-------cCC
Confidence            4899999999999999999999999999999765431  1233321  248889999 999999887765       689


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCC-
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNM-  157 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~-  157 (174)
                      ++|||++...                                  .+.|..+ .++++++    ++.+ .++||++||.. 
T Consensus        76 ~Vi~~a~~~~----------------------------------~~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~~  116 (352)
T 1xgk_A           76 LAFINTTSQA----------------------------------GDEIAIG-KDLADAA----KRAGTIQHYIYSSMPDH  116 (352)
T ss_dssp             EEEECCCSTT----------------------------------SCHHHHH-HHHHHHH----HHHSCCSEEEEEECCCG
T ss_pred             EEEEcCCCCC----------------------------------cHHHHHH-HHHHHHH----HHcCCccEEEEeCCccc
Confidence            9999986410                                  1234444 5555544    5555 57999999987 


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.+....|..+|.
T Consensus       117 ~~~~~~~~~~y~~sK~  132 (352)
T 1xgk_A          117 SLYGPWPAVPMWAPKF  132 (352)
T ss_dssp             GGTSSCCCCTTTHHHH
T ss_pred             cccCCCCCccHHHHHH
Confidence            4444445567777663

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.52  E-value=2e-15  Score=113.93  Aligned_cols=109  Identities=17%  Similarity=0.104  Sum_probs=79.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|+      +...            ....+..+.+|++|.+++.++++..     ++|+
T Consensus         8 ~vlVtGatG~iG~~l~~~L~~~g~------~~~~------------~~~~~~~~~~D~~d~~~~~~~~~~~-----~~d~   64 (319)
T 4b8w_A            8 RILVTGGSGLVGKAIQKVVADGAG------LPGE------------DWVFVSSKDADLTDTAQTRALFEKV-----QPTH   64 (319)
T ss_dssp             EEEEETCSSHHHHHHHHHHHTTTC------CTTC------------EEEECCTTTCCTTSHHHHHHHHHHS-----CCSE
T ss_pred             eEEEECCCcHHHHHHHHHHHhcCC------cccc------------cccccCceecccCCHHHHHHHHhhc-----CCCE
Confidence            489999999999999999999997      1100            0012444578999999998888753     6999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |||+|+......                      .+.++....+++|+.++.++++++    ++.+.+++|++||...
T Consensus        65 Vih~A~~~~~~~----------------------~~~~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~v~~SS~~v  116 (319)
T 4b8w_A           65 VIHLAAMVGGLF----------------------RNIKYNLDFWRKNVHMNDNVLHSA----FEVGARKVVSCLSTCI  116 (319)
T ss_dssp             EEECCCCCCCHH----------------------HHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEECCGGG
T ss_pred             EEECceeccccc----------------------ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEEcchhh
Confidence            999998743110                      011223455899999999999988    4445579999999753

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.50  E-value=3.9e-14  Score=108.78  Aligned_cols=79  Identities=15%  Similarity=0.134  Sum_probs=63.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH---HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR---GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++|||||+|+||.+++++|+++|++|+++.|+...   ..+..+.+..   .++.++.+|++|.+++.+++++.     +
T Consensus        12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~---~~v~~~~~Dl~d~~~l~~~~~~~-----~   83 (346)
T 3i6i_A           12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALED---KGAIIVYGLINEQEAMEKILKEH-----E   83 (346)
T ss_dssp             CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHH---TTCEEEECCTTCHHHHHHHHHHT-----T
T ss_pred             eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHh---CCcEEEEeecCCHHHHHHHHhhC-----C
Confidence            58999999999999999999999999999997521   1222233332   35899999999999998888754     7


Q ss_pred             ccEEEecccc
Q 035504           78 LDILVNNAAI   87 (174)
Q Consensus        78 id~li~~ag~   87 (174)
                      +|+|||++|.
T Consensus        84 ~d~Vi~~a~~   93 (346)
T 3i6i_A           84 IDIVVSTVGG   93 (346)
T ss_dssp             CCEEEECCCG
T ss_pred             CCEEEECCch
Confidence            9999999975

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.50  E-value=5.4e-14  Score=106.30  Aligned_cols=78  Identities=15%  Similarity=0.133  Sum_probs=61.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh----HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK----RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +++||||+|+||.+++++|+++|++|+++.|+..    ...+..+++..   .++.++.+|++|.+++.++++       
T Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~l~~~~~-------   75 (313)
T 1qyd_A            6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ---LGAKLIEASLDDHQRLVDALK-------   75 (313)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT---TTCEEECCCSSCHHHHHHHHT-------
T ss_pred             EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHh---CCeEEEeCCCCCHHHHHHHHh-------
Confidence            4899999999999999999999999999999742    11122223322   348899999999998887775       


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      ++|+|||++|..
T Consensus        76 ~~d~vi~~a~~~   87 (313)
T 1qyd_A           76 QVDVVISALAGG   87 (313)
T ss_dssp             TCSEEEECCCCS
T ss_pred             CCCEEEECCccc
Confidence            699999999863

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.47  E-value=5.4e-14  Score=108.36  Aligned_cols=115  Identities=15%  Similarity=0.108  Sum_probs=86.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-----CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-----IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      ++|||||+|+||.+++++|+++|     ++|++++|+.....     +   ...++.++.+|++|.+++.++++.    .
T Consensus         3 ~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~---~~~~~~~~~~Dl~d~~~~~~~~~~----~   70 (364)
T 2v6g_A            3 VALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H---EDNPINYVQCDISDPDDSQAKLSP----L   70 (364)
T ss_dssp             EEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C---CSSCCEEEECCTTSHHHHHHHHTT----C
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c---ccCceEEEEeecCCHHHHHHHHhc----C
Confidence            48999999999999999999999     99999999765321     1   123588999999999888776652    2


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEE----
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIV----  151 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv----  151 (174)
                      +++|++||+||....                            +....+++|+.++.++++++.+...  +..++|    
T Consensus        71 ~~~d~vih~a~~~~~----------------------------~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g  120 (364)
T 2v6g_A           71 TDVTHVFYVTWANRS----------------------------TEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTG  120 (364)
T ss_dssp             TTCCEEEECCCCCCS----------------------------SHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECC
T ss_pred             CCCCEEEECCCCCcc----------------------------hHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccC
Confidence            249999999986310                            1234589999999999999854421  345776    


Q ss_pred             ---EEecCC
Q 035504          152 ---NVSSNM  157 (174)
Q Consensus       152 ---~isS~~  157 (174)
                         ++||..
T Consensus       121 ~~i~~Ss~~  129 (364)
T 2v6g_A          121 RKHYMGPFE  129 (364)
T ss_dssp             THHHHCCGG
T ss_pred             ceEEEechh
Confidence               677764

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.45  E-value=2.1e-13  Score=102.83  Aligned_cols=77  Identities=16%  Similarity=0.224  Sum_probs=61.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-----HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-----GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      +++||||+|+||.+++++|+++|++|+++.|+...     ..+..+++..   .++.++.+|++|.+++.++++      
T Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~---~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            6 RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA---SGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT---TTCEEECCCTTCHHHHHHHHH------
T ss_pred             EEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh---CCCEEEEeccCCHHHHHHHHc------
Confidence            48999999999999999999999999999997421     1122223322   348899999999999888776      


Q ss_pred             CCccEEEecccc
Q 035504           76 GKLDILVNNAAI   87 (174)
Q Consensus        76 g~id~li~~ag~   87 (174)
                       ++|++||++|.
T Consensus        77 -~~d~vi~~a~~   87 (308)
T 1qyc_A           77 -NVDVVISTVGS   87 (308)
T ss_dssp             -TCSEEEECCCG
T ss_pred             -CCCEEEECCcc
Confidence             69999999975

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.45  E-value=2.9e-13  Score=102.73  Aligned_cols=77  Identities=17%  Similarity=0.195  Sum_probs=62.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-----hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE-----KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      +++||||+|+||.+++++|+++|++|+++.|+.     ....+..+++..   .++.++.+|++|.+++.++++      
T Consensus         6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~---~~v~~v~~D~~d~~~l~~a~~------   76 (321)
T 3c1o_A            6 KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS---MGVTIIEGEMEEHEKMVSVLK------   76 (321)
T ss_dssp             CEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH---TTCEEEECCTTCHHHHHHHHT------
T ss_pred             EEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc---CCcEEEEecCCCHHHHHHHHc------
Confidence            589999999999999999999999999999985     122222333332   248899999999998888776      


Q ss_pred             CCccEEEecccc
Q 035504           76 GKLDILVNNAAI   87 (174)
Q Consensus        76 g~id~li~~ag~   87 (174)
                       ++|+|||++|.
T Consensus        77 -~~d~vi~~a~~   87 (321)
T 3c1o_A           77 -QVDIVISALPF   87 (321)
T ss_dssp             -TCSEEEECCCG
T ss_pred             -CCCEEEECCCc
Confidence             69999999986

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.44  E-value=6.4e-15  Score=111.58  Aligned_cols=114  Identities=15%  Similarity=0.109  Sum_probs=75.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhh-cCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKH-SGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+..........+.. ....++.++.+|++                 ++|
T Consensus         9 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----------------~~d   71 (321)
T 3vps_A            9 RILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----------------DVR   71 (321)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----------------TEE
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----------------cCC
Confidence            489999999999999999999999999999975410000001111 01123445555554                 799


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +|||+||.......               +.        .....++ |+.++.++++++.    +.+.++||++||....
T Consensus        72 ~vi~~a~~~~~~~~---------------~~--------~~~~~~~-n~~~~~~ll~a~~----~~~v~~~v~~SS~~v~  123 (321)
T 3vps_A           72 LVYHLASHKSVPRS---------------FK--------QPLDYLD-NVDSGRHLLALCT----SVGVPKVVVGSTCEVY  123 (321)
T ss_dssp             EEEECCCCCCHHHH---------------TT--------STTTTHH-HHHHHHHHHHHHH----HHTCCEEEEEEEGGGG
T ss_pred             EEEECCccCChHHH---------------Hh--------CHHHHHH-HHHHHHHHHHHHH----HcCCCeEEEecCHHHh
Confidence            99999997542110               00        0112367 9999999998884    3445799999997643

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.44  E-value=3.1e-13  Score=101.88  Aligned_cols=76  Identities=18%  Similarity=0.233  Sum_probs=61.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-------hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE-------KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      +++||||+|+||.+++++|+++|++|+++.|+.       +... ..+++..   .++.++.+|++|.+++.++++    
T Consensus         4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~l~~---~~v~~v~~D~~d~~~l~~~~~----   75 (307)
T 2gas_A            4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEE-LIDNYQS---LGVILLEGDINDHETLVKAIK----   75 (307)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHH-HHHHHHH---TTCEEEECCTTCHHHHHHHHT----
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHH-HHHHHHh---CCCEEEEeCCCCHHHHHHHHh----
Confidence            589999999999999999999999999999985       3222 2233332   248889999999998887776    


Q ss_pred             hcCCccEEEecccc
Q 035504           74 QFGKLDILVNNAAI   87 (174)
Q Consensus        74 ~~g~id~li~~ag~   87 (174)
                         ++|+|||++|.
T Consensus        76 ---~~d~vi~~a~~   86 (307)
T 2gas_A           76 ---QVDIVICAAGR   86 (307)
T ss_dssp             ---TCSEEEECSSS
T ss_pred             ---CCCEEEECCcc
Confidence               69999999986

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.44  E-value=1.9e-13  Score=103.70  Aligned_cols=77  Identities=14%  Similarity=0.214  Sum_probs=62.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+|+||.+++++|+++|++|+++.|+.....+..+++..   .++.++.+|++|.+++.++++       ++|+
T Consensus        13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~---~~v~~v~~Dl~d~~~l~~a~~-------~~d~   82 (318)
T 2r6j_A           13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS---LGAIIVKGELDEHEKLVELMK-------KVDV   82 (318)
T ss_dssp             CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH---TTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc---CCCEEEEecCCCHHHHHHHHc-------CCCE
Confidence            489999999999999999999999999999986422233333333   248889999999998888776       6999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      |||+++.
T Consensus        83 vi~~a~~   89 (318)
T 2r6j_A           83 VISALAF   89 (318)
T ss_dssp             EEECCCG
T ss_pred             EEECCch
Confidence            9999975

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.43  E-value=1.5e-13  Score=103.37  Aligned_cols=79  Identities=23%  Similarity=0.232  Sum_probs=66.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|+|+++++.|+++|++|++++|+.+..++..+++....  ++.++.+|++|+++++++++       .+|+
T Consensus       121 ~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~--~~~~~~~D~~~~~~~~~~~~-------~~Dv  191 (287)
T 1lu9_A          121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETADDASRAEAVK-------GAHF  191 (287)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--TCCCEEEECCSHHHHHHHTT-------TCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEecCCCHHHHHHHHH-------hCCE
Confidence            47999999999999999999999999999999887777777775432  36678899999988877665       5899


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      +|||+|..
T Consensus       192 lVn~ag~g  199 (287)
T 1lu9_A          192 VFTAGAIG  199 (287)
T ss_dssp             EEECCCTT
T ss_pred             EEECCCcc
Confidence            99999863

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.41  E-value=3.4e-13  Score=104.42  Aligned_cols=105  Identities=17%  Similarity=0.076  Sum_probs=80.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|+||.+++++|+++|+ +|+..+|+                          +|.++++++++       ++|
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------~d~~~l~~~~~-------~~d   48 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------TKEEELESALL-------KAD   48 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------CCHHHHHHHHH-------HCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------CCHHHHHHHhc-------cCC
Confidence            489999999999999999999998 77666553                          67777877776       589


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCC-eEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP-RIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~iv~isS~~~  158 (174)
                      ++||+||...+.                .+.           ..+++|+.++.++++++    ++.+.. ++|++||...
T Consensus        49 ~Vih~a~~~~~~----------------~~~-----------~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~   97 (369)
T 3st7_A           49 FIVHLAGVNRPE----------------HDK-----------EFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQA   97 (369)
T ss_dssp             EEEECCCSBCTT----------------CST-----------TCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGG
T ss_pred             EEEECCcCCCCC----------------CHH-----------HHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhh
Confidence            999999875321                111           22789999999999888    455444 8999999876


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..    ...|+.+|.
T Consensus        98 ~~----~~~Y~~sK~  108 (369)
T 3st7_A           98 TQ----DNPYGESKL  108 (369)
T ss_dssp             GS----CSHHHHHHH
T ss_pred             cC----CCCchHHHH
Confidence            53    456766663

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.36  E-value=2.1e-12  Score=104.28  Aligned_cols=109  Identities=18%  Similarity=0.139  Sum_probs=78.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||+|+||.+++++|+++|++|++++|+....               ..+..|+.+..         .+.+.++|+
T Consensus       149 ~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------------~~v~~d~~~~~---------~~~l~~~D~  204 (516)
T 3oh8_A          149 TVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------------GKRFWDPLNPA---------SDLLDGADV  204 (516)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------------TCEECCTTSCC---------TTTTTTCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------------cceeecccchh---------HHhcCCCCE
Confidence            489999999999999999999999999999986531               12566775431         223458999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |||+||.....                      ..+.+.....+++|+.++.++++++.   ++.+.++||++||...
T Consensus       205 Vih~A~~~~~~----------------------~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~v  257 (516)
T 3oh8_A          205 LVHLAGEPIFG----------------------RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGF  257 (516)
T ss_dssp             EEECCCC---------------------------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGG
T ss_pred             EEECCCCcccc----------------------ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceE
Confidence            99999874321                      11223344568999999999999743   3445579999999653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.33  E-value=3.7e-12  Score=95.08  Aligned_cols=68  Identities=15%  Similarity=0.038  Sum_probs=56.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||||| |+||.+++++|+++|++|++++|+.........       .++.++.+|++|.+            +.++|+
T Consensus         7 ~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~------------~~~~d~   66 (286)
T 3ius_A            7 TLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS------------LDGVTH   66 (286)
T ss_dssp             EEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC------------CTTCCE
T ss_pred             cEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc------------cCCCCE
Confidence            4899998 999999999999999999999998765433321       24899999999843            458999


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      |||+|+..
T Consensus        67 vi~~a~~~   74 (286)
T 3ius_A           67 LLISTAPD   74 (286)
T ss_dssp             EEECCCCB
T ss_pred             EEECCCcc
Confidence            99999864

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.11  E-value=5.8e-11  Score=85.78  Aligned_cols=75  Identities=17%  Similarity=0.203  Sum_probs=57.2

Q ss_pred             CEEEecC----------------CCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhH
Q 035504            1 YAVVTGA----------------NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATI   64 (174)
Q Consensus         1 ~~litGa----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i   64 (174)
                      ++|||||                |+|||.++|++|+++|++|++++++.. .       ..  +..+  -.+|+++   .
T Consensus        10 ~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l-------~~--~~g~--~~~dv~~---~   74 (226)
T 1u7z_A           10 NIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-L-------PT--PPFV--KRVDVMT---A   74 (226)
T ss_dssp             EEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-C-------CC--CTTE--EEEECCS---H
T ss_pred             EEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-c-------cc--CCCC--eEEccCc---H
Confidence            4899999                689999999999999999999987642 1       00  1112  2456655   5


Q ss_pred             HHHHHHHHhhcCCccEEEecccccCc
Q 035504           65 HSLADFVRSQFGKLDILVNNAAIFGV   90 (174)
Q Consensus        65 ~~~~~~~~~~~g~id~li~~ag~~~~   90 (174)
                      +++++.+.+.++++|++|||||+...
T Consensus        75 ~~~~~~v~~~~~~~Dili~~Aav~d~  100 (226)
T 1u7z_A           75 LEMEAAVNASVQQQNIFIGCAAVADY  100 (226)
T ss_dssp             HHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             HHHHHHHHHhcCCCCEEEECCcccCC
Confidence            55667778889999999999998653

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=99.05  E-value=1.3e-09  Score=85.51  Aligned_cols=82  Identities=22%  Similarity=0.317  Sum_probs=71.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC---CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNG---IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +++|+|| |+||.++++.|+++|   .+|++.+|+.+.+++..+++...++.++..+.+|++|.+++++++++.     +
T Consensus         3 kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----~   76 (405)
T 4ina_A            3 KVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----K   76 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----C
Confidence            3789999 899999999999998   489999999888888888887654446889999999999999999876     6


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      +|+||||+|..
T Consensus        77 ~DvVin~ag~~   87 (405)
T 4ina_A           77 PQIVLNIALPY   87 (405)
T ss_dssp             CSEEEECSCGG
T ss_pred             CCEEEECCCcc
Confidence            99999999864

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.05  E-value=2e-10  Score=83.17  Aligned_cols=77  Identities=16%  Similarity=0.173  Sum_probs=59.4

Q ss_pred             CEEEecC----------------CCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhH
Q 035504            1 YAVVTGA----------------NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATI   64 (174)
Q Consensus         1 ~~litGa----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i   64 (174)
                      ++|||||                ||++|.++|++++++|++|+++++.... .       ...+..     +|+.+.+++
T Consensus         5 ~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~-------~~~~~~-----~~~~~v~s~   71 (232)
T 2gk4_A            5 KILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-K-------PEPHPN-----LSIREITNT   71 (232)
T ss_dssp             EEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-C-------CCCCTT-----EEEEECCSH
T ss_pred             EEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-c-------ccCCCC-----eEEEEHhHH
Confidence            4899999                7789999999999999999999987431 0       000112     344455578


Q ss_pred             HHHHHHHHhhcCCccEEEecccccCc
Q 035504           65 HSLADFVRSQFGKLDILVNNAAIFGV   90 (174)
Q Consensus        65 ~~~~~~~~~~~g~id~li~~ag~~~~   90 (174)
                      +++++.+.+.++++|++|+|||+...
T Consensus        72 ~em~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           72 KDLLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             HHHHHHHHHhcCCCCEEEEcCccccc
Confidence            88888888899999999999998654

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=99.04  E-value=2.3e-10  Score=78.52  Aligned_cols=79  Identities=16%  Similarity=0.246  Sum_probs=63.4

Q ss_pred             CCchhHHHHHHHHHCCCeEEEEeeChhHHH---HHHHHHhhcCCCceeEEEeecCCh--hhHHHHHHHHHhhcCCccEEE
Q 035504            8 NKGIGYETVRQLASNGIIVVLTARDEKRGL---EAVEKLKHSGFDSVIFHQLDVADP--ATIHSLADFVRSQFGKLDILV   82 (174)
Q Consensus         8 ~~giG~~~a~~l~~~g~~v~~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~Dv~~~--~~i~~~~~~~~~~~g~id~li   82 (174)
                      ++-++.+.++.|++.|++|++..|+..+..   +..+.+.+.+ .+...+.+|++++  ++++++++.+.+++|+ |+||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G-~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAG-MDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTT-CEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcC-CeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            356889999999999999999988654322   2234444444 3577889999999  9999999999999999 9999


Q ss_pred             eccccc
Q 035504           83 NNAAIF   88 (174)
Q Consensus        83 ~~ag~~   88 (174)
                      ||||..
T Consensus       103 nnAgg~  108 (157)
T 3gxh_A          103 HCLANY  108 (157)
T ss_dssp             ECSBSH
T ss_pred             ECCCCC
Confidence            999974

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.04  E-value=9e-10  Score=82.68  Aligned_cols=110  Identities=16%  Similarity=0.105  Sum_probs=71.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .+|||||+|.||..++++|.++|++|+++.|++..             .++   ..|     .+      ..+.+.++|.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-------------~~~---~~~-----~~------~~~~l~~~d~   54 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-------------GRI---TWD-----EL------AASGLPSCDA   54 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-------------TEE---EHH-----HH------HHHCCCSCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-------------Cee---ecc-----hh------hHhhccCCCE
Confidence            48999999999999999999999999999987532             111   111     11      1224568999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      +||.||..-...                   ....+....+..++.|+.++..+.+.+...  ..+..++|+.||...
T Consensus        55 vihla~~~i~~~-------------------~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~v  111 (298)
T 4b4o_A           55 AVNLAGENILNP-------------------LRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAY  111 (298)
T ss_dssp             EEECCCCCSSCT-------------------TSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGG
T ss_pred             EEEeccCcccch-------------------hhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeee
Confidence            999998532110                   011234445567889999998888766321  122345677776543

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.99  E-value=2.2e-09  Score=69.36  Aligned_cols=72  Identities=21%  Similarity=0.184  Sum_probs=58.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|+|+ |++|..+++.|.++| ++|++++|+.+......    .   .++..+..|+++.+++.++++       ++|
T Consensus         7 ~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~---~~~~~~~~d~~~~~~~~~~~~-------~~d   71 (118)
T 3ic5_A            7 NICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R---MGVATKQVDAKDEAGLAKALG-------GFD   71 (118)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T---TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h---CCCcEEEecCCCHHHHHHHHc-------CCC
Confidence            3789999 999999999999999 89999999876544432    1   247788999999887776654       799


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|++++.
T Consensus        72 ~vi~~~~~   79 (118)
T 3ic5_A           72 AVISAAPF   79 (118)
T ss_dssp             EEEECSCG
T ss_pred             EEEECCCc
Confidence            99999964

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.98  E-value=8.6e-10  Score=84.23  Aligned_cols=119  Identities=15%  Similarity=0.080  Sum_probs=79.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-------eEEEEeeChh--HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-------IVVLTARDEK--RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-------~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      +++||||+|.||..++..|+++|+       +|+++++...  .......++....   +.+. .|+.+.+++.++++  
T Consensus         6 kVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~---~~~~-~di~~~~~~~~a~~--   79 (327)
T 1y7t_A            6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA---FPLL-AGLEATDDPKVAFK--   79 (327)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT---CTTE-EEEEEESCHHHHTT--
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccc---cccc-CCeEeccChHHHhC--
Confidence            379999999999999999999986       7999988642  2222223343211   1222 57776666655443  


Q ss_pred             HhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEE
Q 035504           72 RSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIV  151 (174)
Q Consensus        72 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv  151 (174)
                           +.|++||.||......              +        +   ....+++|+.++..+++++..+=  ....+++
T Consensus        80 -----~~D~Vih~Ag~~~~~~--------------~--------~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vv  127 (327)
T 1y7t_A           80 -----DADYALLVGAAPRKAG--------------M--------E---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVL  127 (327)
T ss_dssp             -----TCSEEEECCCCCCCTT--------------C--------C---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEE
T ss_pred             -----CCCEEEECCCcCCCCC--------------C--------C---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEE
Confidence                 7899999999743110              0        1   12358999999999999885431  1335888


Q ss_pred             EEecCC
Q 035504          152 NVSSNM  157 (174)
Q Consensus       152 ~isS~~  157 (174)
                      ++|+..
T Consensus       128 v~snp~  133 (327)
T 1y7t_A          128 VVGNPA  133 (327)
T ss_dssp             ECSSSH
T ss_pred             EeCCch
Confidence            888754

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.84  E-value=1.3e-08  Score=72.00  Aligned_cols=76  Identities=16%  Similarity=0.167  Sum_probs=52.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+||++|||.++++.+.+.|++|++++++++..+.. +   +.+..    ...|.++.+..+.+.+...  .+++|+
T Consensus        41 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~---~~g~~----~~~d~~~~~~~~~~~~~~~--~~~~D~  110 (198)
T 1pqw_A           41 RVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-S---RLGVE----YVGDSRSVDFADEILELTD--GYGVDV  110 (198)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-H---TTCCS----EEEETTCSTHHHHHHHHTT--TCCEEE
T ss_pred             EEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---HcCCC----EEeeCCcHHHHHHHHHHhC--CCCCeE
Confidence            489999999999999999999999999999886543322 2   22222    2357777654443333221  236999


Q ss_pred             EEeccc
Q 035504           81 LVNNAA   86 (174)
Q Consensus        81 li~~ag   86 (174)
                      +|+|+|
T Consensus       111 vi~~~g  116 (198)
T 1pqw_A          111 VLNSLA  116 (198)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999996

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.77  E-value=3.4e-08  Score=75.82  Aligned_cols=77  Identities=17%  Similarity=0.183  Sum_probs=58.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+|+++|||.++++.+...|++|++++++.+.. +.++++   +.+    ...|+++.+++.+.+.++.+.  ++|+
T Consensus       172 ~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-~~~~~~---g~~----~~~d~~~~~~~~~~~~~~~~~--~~D~  241 (347)
T 2hcy_A          172 WVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELFRSI---GGE----VFIDFTKEKDIVGAVLKATDG--GAHG  241 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-HHHHHT---TCC----EEEETTTCSCHHHHHHHHHTS--CEEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-HHHHHc---CCc----eEEecCccHhHHHHHHHHhCC--CCCE
Confidence            489999999999999999999999999999886654 333333   222    234888777787777766544  7999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+|+|.
T Consensus       242 vi~~~g~  248 (347)
T 2hcy_A          242 VINVSVS  248 (347)
T ss_dssp             EEECSSC
T ss_pred             EEECCCc
Confidence            9999974

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.77  E-value=2.4e-08  Score=76.23  Aligned_cols=77  Identities=16%  Similarity=0.174  Sum_probs=58.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+||++|||.++++.+.+.|++|++++++.+..+.. +++   +..    ..+|.++.+++.+.+.++..  +++|+
T Consensus       148 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~----~~~d~~~~~~~~~~~~~~~~--~~~d~  217 (333)
T 1v3u_A          148 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFD----AAFNYKTVNSLEEALKKASP--DGYDC  217 (333)
T ss_dssp             EEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS----EEEETTSCSCHHHHHHHHCT--TCEEE
T ss_pred             EEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCc----EEEecCCHHHHHHHHHHHhC--CCCeE
Confidence            489999999999999999999999999999986654433 333   222    23588875667666665543  58999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+|+|.
T Consensus       218 vi~~~g~  224 (333)
T 1v3u_A          218 YFDNVGG  224 (333)
T ss_dssp             EEESSCH
T ss_pred             EEECCCh
Confidence            9999985

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.73  E-value=3.7e-08  Score=76.39  Aligned_cols=72  Identities=17%  Similarity=0.148  Sum_probs=55.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+ |+||+.+++.+...|++|++++++.+..+...+.+    +..   +.+|.++.+++++++.       +.|+
T Consensus       168 ~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~----g~~---~~~~~~~~~~l~~~~~-------~~Dv  232 (369)
T 2eez_A          168 SVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF----GGR---VITLTATEANIKKSVQ-------HADL  232 (369)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----TTS---EEEEECCHHHHHHHHH-------HCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc----Cce---EEEecCCHHHHHHHHh-------CCCE
Confidence            4799999 99999999999999999999999876554433322    222   4567788777776654       6899


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+++|.
T Consensus       233 Vi~~~g~  239 (369)
T 2eez_A          233 LIGAVLV  239 (369)
T ss_dssp             EEECCC-
T ss_pred             EEECCCC
Confidence            9999986

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.67  E-value=3.8e-08  Score=78.21  Aligned_cols=75  Identities=19%  Similarity=0.180  Sum_probs=58.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+| +|++|+++++.|++.|++|++++|+.+.+++..+    ..+ .+..+.+|++|.+++.++++       ++|+
T Consensus         5 ~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~----~~~-~~~~~~~Dv~d~~~l~~~l~-------~~Dv   71 (450)
T 1ff9_A            5 SVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA----GVQ-HSTPISLDVNDDAALDAEVA-------KHDL   71 (450)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT----TCT-TEEEEECCTTCHHHHHHHHT-------TSSE
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH----hcC-CceEEEeecCCHHHHHHHHc-------CCcE
Confidence            378998 7999999999999999999999998765443322    221 36778899999888877664       7999


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      ||||++..
T Consensus        72 VIn~a~~~   79 (450)
T 1ff9_A           72 VISLIPYT   79 (450)
T ss_dssp             EEECCC--
T ss_pred             EEECCccc
Confidence            99999863

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.65  E-value=1.4e-08  Score=76.12  Aligned_cols=76  Identities=14%  Similarity=0.209  Sum_probs=56.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|++ |+|+++++.|++.| +|++++|+.+++++..+++...+.... .+.+|+++.          .+.++++|+
T Consensus       130 ~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~----------~~~~~~~Di  196 (287)
T 1nvt_A          130 NIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL----------DVDLDGVDI  196 (287)
T ss_dssp             EEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT----------TCCCTTCCE
T ss_pred             EEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH----------HHhhCCCCE
Confidence            47999997 99999999999999 999999998877777776654321111 123455542          345678999


Q ss_pred             EEecccccC
Q 035504           81 LVNNAAIFG   89 (174)
Q Consensus        81 li~~ag~~~   89 (174)
                      +|||+|...
T Consensus       197 lVn~ag~~~  205 (287)
T 1nvt_A          197 IINATPIGM  205 (287)
T ss_dssp             EEECSCTTC
T ss_pred             EEECCCCCC
Confidence            999999754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.64  E-value=1.2e-10  Score=92.66  Aligned_cols=39  Identities=31%  Similarity=0.369  Sum_probs=33.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV   40 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   40 (174)
                      +++|+|++ +||+++|+.|.+.|++|+++++++....+..
T Consensus       267 tVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          267 VAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             EEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            47999997 9999999999999999999999876544443

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.50  E-value=1.7e-07  Score=71.82  Aligned_cols=78  Identities=18%  Similarity=0.179  Sum_probs=56.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+||++|||..+++.+...|++|++++++.++.+...+++   +.+    ...|.++.+++.+.+.++..  +++|+
T Consensus       158 ~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~----~~~d~~~~~~~~~~~~~~~~--~~~d~  228 (345)
T 2j3h_A          158 TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFD----DAFNYKEESDLTAALKRCFP--NGIDI  228 (345)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCS----EEEETTSCSCSHHHHHHHCT--TCEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCc----eEEecCCHHHHHHHHHHHhC--CCCcE
Confidence            4899999999999999999999999999999866543332222   222    23477776566666655432  57999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+|+|.
T Consensus       229 vi~~~g~  235 (345)
T 2j3h_A          229 YFENVGG  235 (345)
T ss_dssp             EEESSCH
T ss_pred             EEECCCH
Confidence            9999985

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.48  E-value=1.3e-06  Score=66.16  Aligned_cols=78  Identities=18%  Similarity=0.196  Sum_probs=59.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC---hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD---EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +++|+|+ ||+|++++..|++.|+ +|++++|+   .+++++.++++....+  ..+...++.+.+++.+.+.       
T Consensus       156 ~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~--~~~~~~~~~~~~~l~~~l~-------  225 (315)
T 3tnl_A          156 KMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD--CKAQLFDIEDHEQLRKEIA-------  225 (315)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS--CEEEEEETTCHHHHHHHHH-------
T ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC--CceEEeccchHHHHHhhhc-------
Confidence            4799998 7999999999999998 89999999   7778888888876543  3334456666555554444       


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      ..|++||+....
T Consensus       226 ~aDiIINaTp~G  237 (315)
T 3tnl_A          226 ESVIFTNATGVG  237 (315)
T ss_dssp             TCSEEEECSSTT
T ss_pred             CCCEEEECccCC
Confidence            789999988653

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.47  E-value=4.4e-07  Score=72.41  Aligned_cols=74  Identities=16%  Similarity=0.208  Sum_probs=59.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|+|+ ||+|+++++.|++. |++|++++|+.+.+++..+.    .  ++..+.+|+.|.+++.++++       ++|
T Consensus        25 ~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~--~~~~~~~D~~d~~~l~~~l~-------~~D   90 (467)
T 2axq_A           25 NVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----S--GSKAISLDVTDDSALDKVLA-------DND   90 (467)
T ss_dssp             EEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----G--TCEEEECCTTCHHHHHHHHH-------TSS
T ss_pred             EEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----c--CCcEEEEecCCHHHHHHHHc-------CCC
Confidence            3789997 99999999999998 78999999997665554332    1  25667899999888777665       799


Q ss_pred             EEEeccccc
Q 035504           80 ILVNNAAIF   88 (174)
Q Consensus        80 ~li~~ag~~   88 (174)
                      +|||+++..
T Consensus        91 vVIn~tp~~   99 (467)
T 2axq_A           91 VVISLIPYT   99 (467)
T ss_dssp             EEEECSCGG
T ss_pred             EEEECCchh
Confidence            999999864

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.46  E-value=3.9e-07  Score=70.14  Aligned_cols=77  Identities=18%  Similarity=0.164  Sum_probs=53.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||+||++|||.++++.+...|+ +|++++++.++.+...+++   +.+    ..+|..+. ++.+.+.+...  +++|
T Consensus       163 ~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~----~~~d~~~~-~~~~~~~~~~~--~~~d  232 (357)
T 2zb4_A          163 TMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFD----AAINYKKD-NVAEQLRESCP--AGVD  232 (357)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCS----EEEETTTS-CHHHHHHHHCT--TCEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc----eEEecCch-HHHHHHHHhcC--CCCC
Confidence            489999999999999999999999 9999999865544333223   222    23577664 34333333322  2799


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|+|+|.
T Consensus       233 ~vi~~~G~  240 (357)
T 2zb4_A          233 VYFDNVGG  240 (357)
T ss_dssp             EEEESCCH
T ss_pred             EEEECCCH
Confidence            99999984

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.46  E-value=1.8e-07  Score=75.67  Aligned_cols=68  Identities=25%  Similarity=0.321  Sum_probs=49.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhh--cCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQ--FGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~--~g~i   78 (174)
                      +++|||| +|+|+++++.|++.|++|++++|+.+.+++..+++.    .++.    ++.|   +        +.  .+.+
T Consensus       366 ~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~----~~~~----~~~d---l--------~~~~~~~~  425 (523)
T 2o7s_A          366 TVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG----GKAL----SLTD---L--------DNYHPEDG  425 (523)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT----C-CE----ETTT---T--------TTC--CCS
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----Ccee----eHHH---h--------hhccccCc
Confidence            4799999 599999999999999999999999877777666552    1121    2222   1        12  2358


Q ss_pred             cEEEeccccc
Q 035504           79 DILVNNAAIF   88 (174)
Q Consensus        79 d~li~~ag~~   88 (174)
                      |++|||+|+.
T Consensus       426 DilVN~agvg  435 (523)
T 2o7s_A          426 MVLANTTSMG  435 (523)
T ss_dssp             EEEEECSSTT
T ss_pred             eEEEECCCCC
Confidence            9999999974

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.43  E-value=9e-07  Score=67.44  Aligned_cols=77  Identities=19%  Similarity=0.286  Sum_probs=54.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+||++|||.++++.+...|++|++++++.++.+.. +++   +.+    ...|.++.+..+++.+.. . ..++|+
T Consensus       148 ~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~~---g~~----~~~d~~~~~~~~~i~~~~-~-~~~~d~  217 (333)
T 1wly_A          148 YVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA-RKL---GCH----HTINYSTQDFAEVVREIT-G-GKGVDV  217 (333)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCS----EEEETTTSCHHHHHHHHH-T-TCCEEE
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCC----EEEECCCHHHHHHHHHHh-C-CCCCeE
Confidence            489999999999999999999999999999986554333 333   222    234776655444433322 1 236999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+|+|.
T Consensus       218 vi~~~g~  224 (333)
T 1wly_A          218 VYDSIGK  224 (333)
T ss_dssp             EEECSCT
T ss_pred             EEECCcH
Confidence            9999985

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.43  E-value=1.7e-06  Score=57.69  Aligned_cols=72  Identities=17%  Similarity=0.186  Sum_probs=55.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+ |.+|..+++.|.++|++|++++++++..++..+    .   ...++..|.++++.++++      ...+.|.
T Consensus         8 ~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~---~~~~~~gd~~~~~~l~~~------~~~~~d~   73 (141)
T 3llv_A            8 EYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E---GFDAVIADPTDESFYRSL------DLEGVSA   73 (141)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T---TCEEEECCTTCHHHHHHS------CCTTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C---CCcEEECCCCCHHHHHhC------CcccCCE
Confidence            4789998 679999999999999999999998765444322    2   367788999998876543      2347899


Q ss_pred             EEeccc
Q 035504           81 LVNNAA   86 (174)
Q Consensus        81 li~~ag   86 (174)
                      +|.+.+
T Consensus        74 vi~~~~   79 (141)
T 3llv_A           74 VLITGS   79 (141)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            998875

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.42  E-value=6e-07  Score=66.68  Aligned_cols=72  Identities=21%  Similarity=0.263  Sum_probs=54.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+ ||+|+++++.|++.|++|++++|+.+++++..+++...+  .+     ++.+.+++       . . +++|+
T Consensus       121 ~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~--~~-----~~~~~~~~-------~-~-~~~Di  183 (271)
T 1nyt_A          121 RILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG--SI-----QALSMDEL-------E-G-HEFDL  183 (271)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS--SE-----EECCSGGG-------T-T-CCCSE
T ss_pred             EEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC--Ce-----eEecHHHh-------c-c-CCCCE
Confidence            4799998 799999999999999999999999887777777665422  12     22333322       1 1 68999


Q ss_pred             EEecccccC
Q 035504           81 LVNNAAIFG   89 (174)
Q Consensus        81 li~~ag~~~   89 (174)
                      +|||++...
T Consensus       184 vVn~t~~~~  192 (271)
T 1nyt_A          184 IINATSSGI  192 (271)
T ss_dssp             EEECCSCGG
T ss_pred             EEECCCCCC
Confidence            999999754

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.41  E-value=6.8e-07  Score=67.91  Aligned_cols=76  Identities=13%  Similarity=0.166  Sum_probs=53.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+||++|||.++++.+...|++|++++++++..+.. +++   +.+    ...|.++++..+++.+.+.  ..++|+
T Consensus       143 ~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~-~~~---g~~----~~~~~~~~~~~~~~~~~~~--~~~~D~  212 (327)
T 1qor_A          143 QFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA-LKA---GAW----QVINYREEDLVERLKEITG--GKKVRV  212 (327)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHH---TCS----EEEETTTSCHHHHHHHHTT--TCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCC----EEEECCCccHHHHHHHHhC--CCCceE
Confidence            489999999999999999999999999999986554333 333   222    2347776554444333221  236999


Q ss_pred             EEeccc
Q 035504           81 LVNNAA   86 (174)
Q Consensus        81 li~~ag   86 (174)
                      +|+|+|
T Consensus       213 vi~~~g  218 (327)
T 1qor_A          213 VYDSVG  218 (327)
T ss_dssp             EEECSC
T ss_pred             EEECCc
Confidence            999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.40  E-value=9.6e-07  Score=67.94  Aligned_cols=77  Identities=17%  Similarity=0.240  Sum_probs=54.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+||++|||.++++.+...|++|+++++++++.+.. +++   +.+    ...|..+.+..+++.+ ... .+++|+
T Consensus       165 ~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~----~~~~~~~~~~~~~~~~-~~~-~~~~d~  234 (354)
T 2j8z_A          165 YVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAA----AGFNYKKEDFSEATLK-FTK-GAGVNL  234 (354)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCS----EEEETTTSCHHHHHHH-HTT-TSCEEE
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCc----EEEecCChHHHHHHHH-Hhc-CCCceE
Confidence            489999999999999999999999999999986654333 333   222    2357666544333322 211 136999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+|+|.
T Consensus       235 vi~~~G~  241 (354)
T 2j8z_A          235 ILDCIGG  241 (354)
T ss_dssp             EEESSCG
T ss_pred             EEECCCc
Confidence            9999986

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.39  E-value=6.6e-07  Score=68.23  Aligned_cols=77  Identities=22%  Similarity=0.222  Sum_probs=54.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+|+++|||.+.++.+...|++|+++++++++.+...+++   +.+    ...|..+++ +.+.+.+..  .+++|+
T Consensus       152 ~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~----~~~~~~~~~-~~~~~~~~~--~~~~d~  221 (336)
T 4b7c_A          152 TVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFD----GAIDYKNED-LAAGLKREC--PKGIDV  221 (336)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCS----EEEETTTSC-HHHHHHHHC--TTCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCC----EEEECCCHH-HHHHHHHhc--CCCceE
Confidence            4899999999999999999999999999999876544432333   222    234666644 333333332  247999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+|+|.
T Consensus       222 vi~~~g~  228 (336)
T 4b7c_A          222 FFDNVGG  228 (336)
T ss_dssp             EEESSCH
T ss_pred             EEECCCc
Confidence            9999984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.37  E-value=1.5e-06  Score=66.87  Aligned_cols=77  Identities=21%  Similarity=0.286  Sum_probs=53.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+||++|||.++++.+...|++|+++++++++.+ .++++   +.+    ...|..+++..+++.+.. . ..++|+
T Consensus       173 ~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~---ga~----~~~d~~~~~~~~~~~~~~-~-~~~~D~  242 (351)
T 1yb5_A          173 SVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVLQN---GAH----EVFNHREVNYIDKIKKYV-G-EKGIDI  242 (351)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHT---TCS----EEEETTSTTHHHHHHHHH-C-TTCEEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHc---CCC----EEEeCCCchHHHHHHHHc-C-CCCcEE
Confidence            4899999999999999999999999999999866543 33333   222    235766654333332221 1 237999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+|+|.
T Consensus       243 vi~~~G~  249 (351)
T 1yb5_A          243 IIEMLAN  249 (351)
T ss_dssp             EEESCHH
T ss_pred             EEECCCh
Confidence            9999985

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.37  E-value=1.9e-06  Score=65.81  Aligned_cols=119  Identities=15%  Similarity=0.076  Sum_probs=77.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-------eEEEEeeC----hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-------IVVLTARD----EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLAD   69 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-------~v~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~   69 (174)
                      +++||||+|.+|..++..|+.+|.       +|++++++    .+.......++..... ..   ..|+....+..++++
T Consensus         7 KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~-~~---~~~i~~~~~~~~al~   82 (329)
T 1b8p_A            7 RVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF-PL---LAGMTAHADPMTAFK   82 (329)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC-TT---EEEEEEESSHHHHTT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc-cc---cCcEEEecCcHHHhC
Confidence            378999999999999999999885       79998887    4434444445544211 11   135544445544443


Q ss_pred             HHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCe
Q 035504           70 FVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPR  149 (174)
Q Consensus        70 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~  149 (174)
                             +.|++|+.||....+.                      .+.   ...+..|+.....+++.+..+-  ...++
T Consensus        83 -------~aD~Vi~~ag~~~~~g----------------------~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~  128 (329)
T 1b8p_A           83 -------DADVALLVGARPRGPG----------------------MER---KDLLEANAQIFTVQGKAIDAVA--SRNIK  128 (329)
T ss_dssp             -------TCSEEEECCCCCCCTT----------------------CCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCE
T ss_pred             -------CCCEEEEeCCCCCCCC----------------------CCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeE
Confidence                   7899999999733110                      011   1247899988888888875331  13478


Q ss_pred             EEEEecCC
Q 035504          150 IVNVSSNM  157 (174)
Q Consensus       150 iv~isS~~  157 (174)
                      |+++|.-.
T Consensus       129 ii~~SNPv  136 (329)
T 1b8p_A          129 VLVVGNPA  136 (329)
T ss_dssp             EEECSSSH
T ss_pred             EEEccCch
Confidence            99998743

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.33  E-value=3.9e-06  Score=66.49  Aligned_cols=82  Identities=23%  Similarity=0.357  Sum_probs=54.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEe--ecC---------ChhhHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQL--DVA---------DPATIHSLAD   69 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~--Dv~---------~~~~i~~~~~   69 (174)
                      ++||+||+++||...+..+...|++|+++.++.++.+ .++++   +.+ ..+-..  |+.         +.++++.+.+
T Consensus       223 ~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~-~~~~l---Ga~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (447)
T 4a0s_A          223 IVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEA-AVRAL---GCD-LVINRAELGITDDIADDPRRVVETGRKLAK  297 (447)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHT---TCC-CEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhc---CCC-EEEecccccccccccccccccchhhhHHHH
Confidence            4899999999999999999899999999988765433 23333   322 111111  221         1234445556


Q ss_pred             HHHhhcC-CccEEEecccc
Q 035504           70 FVRSQFG-KLDILVNNAAI   87 (174)
Q Consensus        70 ~~~~~~g-~id~li~~ag~   87 (174)
                      ++.+..+ ++|++|+++|.
T Consensus       298 ~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          298 LVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHSSCCSEEEECSCH
T ss_pred             HHHHHhCCCceEEEECCCc
Confidence            6665544 79999999975

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.32  E-value=5.8e-06  Score=62.99  Aligned_cols=103  Identities=14%  Similarity=0.143  Sum_probs=65.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++|+||+|.+|..++..|+.+|  .+|++++++++  .....++...... ..+ .. +.+..+..+++.       +.
T Consensus        10 KI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~-~~v-~~-~~~t~d~~~al~-------ga   77 (326)
T 1smk_A           10 KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTG-AVV-RG-FLGQQQLEAALT-------GM   77 (326)
T ss_dssp             EEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSS-CEE-EE-EESHHHHHHHHT-------TC
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhccccc-ceE-EE-EeCCCCHHHHcC-------CC
Confidence            37899999999999999999998  78999887754  2233344332111 111 11 223334444433       79


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhh
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIP  140 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  140 (174)
                      |++|+++|....+.           .   ...           ..+..|+.+...+++.+..
T Consensus        78 DvVi~~ag~~~~~g-----------~---~r~-----------dl~~~N~~~~~~i~~~i~~  114 (326)
T 1smk_A           78 DLIIVPAGVPRKPG-----------M---TRD-----------DLFKINAGIVKTLCEGIAK  114 (326)
T ss_dssp             SEEEECCCCCCCSS-----------C---CCS-----------HHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEcCCcCCCCC-----------C---CHH-----------HHHHHHHHHHHHHHHHHHh
Confidence            99999999633111           0   011           2278899888888887754

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.31  E-value=9.9e-07  Score=58.60  Aligned_cols=73  Identities=14%  Similarity=0.122  Sum_probs=53.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+ |++|..+++.|.+.|++|++++++.+..+.    +...   ....+..|.++.+.+.++      ...+.|+
T Consensus         8 ~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~----~~~~---~~~~~~~d~~~~~~l~~~------~~~~~d~   73 (144)
T 2hmt_A            8 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA----YASY---ATHAVIANATEENELLSL------GIRNFEY   73 (144)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT----TTTT---CSEEEECCTTCHHHHHTT------TGGGCSE
T ss_pred             cEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHh---CCEEEEeCCCCHHHHHhc------CCCCCCE
Confidence            4799998 999999999999999999999988654322    2222   245677888876554332      2347999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|++++.
T Consensus        74 vi~~~~~   80 (144)
T 2hmt_A           74 VIVAIGA   80 (144)
T ss_dssp             EEECCCS
T ss_pred             EEECCCC
Confidence            9999864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.24  E-value=2.4e-06  Score=65.45  Aligned_cols=78  Identities=14%  Similarity=0.170  Sum_probs=53.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||+|+++|||..++..+... |++|+++++++++.+. ++++   +.+    ...|..+.+..++ +.++... +++|
T Consensus       173 ~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~-~~~~---g~~----~~~~~~~~~~~~~-~~~~~~~-~~~d  242 (347)
T 1jvb_A          173 TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA-AKRA---GAD----YVINASMQDPLAE-IRRITES-KGVD  242 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH-HHHH---TCS----EEEETTTSCHHHH-HHHHTTT-SCEE
T ss_pred             EEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-HHHh---CCC----EEecCCCccHHHH-HHHHhcC-CCce
Confidence            4899999999999999999998 9999999988665433 3333   222    2246666443332 3322221 5899


Q ss_pred             EEEeccccc
Q 035504           80 ILVNNAAIF   88 (174)
Q Consensus        80 ~li~~ag~~   88 (174)
                      ++|+|+|..
T Consensus       243 ~vi~~~g~~  251 (347)
T 1jvb_A          243 AVIDLNNSE  251 (347)
T ss_dssp             EEEESCCCH
T ss_pred             EEEECCCCH
Confidence            999999853

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.19  E-value=1.2e-05  Score=60.69  Aligned_cols=112  Identities=18%  Similarity=0.034  Sum_probs=69.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEee--ChhHHHHHHHHHhhc--CCCceeEEEeecCChhhHHHHHHHHHhh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTAR--DEKRGLEAVEKLKHS--GFDSVIFHQLDVADPATIHSLADFVRSQ   74 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r--~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   74 (174)
                      +++||||+|.+|..++..|+..|.  +++++++  +.+.++....++...  ...++.+.. +  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            478999999999999999999875  6888888  654443333344322  112233332 2  2332           


Q ss_pred             cCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEe
Q 035504           75 FGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVS  154 (174)
Q Consensus        75 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~is  154 (174)
                      +.+.|++|+.+|....+.                      .+.+   ..+..|+.....+++.+.    +.....+++++
T Consensus        68 ~~~aDvVi~~ag~~~~~g----------------------~~r~---dl~~~N~~i~~~i~~~i~----~~~p~~~viv~  118 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQPG----------------------QTRI---DLAGDNAPIMEDIQSSLD----EHNDDYISLTT  118 (303)
T ss_dssp             GTTCSEEEECCCCCCCTT----------------------CCHH---HHHHHHHHHHHHHHHHHH----TTCSCCEEEEC
T ss_pred             hCCCCEEEEcCCCCCCCC----------------------CCHH---HHHHHHHHHHHHHHHHHH----HHCCCcEEEEe
Confidence            237999999999732110                      0111   237899988888888874    33333444444


Q ss_pred             c
Q 035504          155 S  155 (174)
Q Consensus       155 S  155 (174)
                      |
T Consensus       119 S  119 (303)
T 1o6z_A          119 S  119 (303)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.19  E-value=4.1e-06  Score=62.57  Aligned_cols=76  Identities=18%  Similarity=0.228  Sum_probs=56.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|+|+ ||+|++++..|++.|+ +|++++|+.+++++.++++...++. +.+...+   .+++.+.+.       ..|
T Consensus       129 ~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~-~~i~~~~---~~~l~~~l~-------~~D  196 (283)
T 3jyo_A          129 SVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGR-EAVVGVD---ARGIEDVIA-------AAD  196 (283)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTS-CCEEEEC---STTHHHHHH-------HSS
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCC-ceEEEcC---HHHHHHHHh-------cCC
Confidence            3799998 7999999999999998 6999999998888888888765432 2222233   334544443       579


Q ss_pred             EEEeccccc
Q 035504           80 ILVNNAAIF   88 (174)
Q Consensus        80 ~li~~ag~~   88 (174)
                      ++||+....
T Consensus       197 iVInaTp~G  205 (283)
T 3jyo_A          197 GVVNATPMG  205 (283)
T ss_dssp             EEEECSSTT
T ss_pred             EEEECCCCC
Confidence            999998653

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.18  E-value=1e-05  Score=62.17  Aligned_cols=76  Identities=18%  Similarity=0.247  Sum_probs=54.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+||+++||.+.+..+...|++|+++++++++.+ .++++   +.+    ...|..+++ ..+.+.++.  .+++|+
T Consensus       170 ~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~l---Ga~----~~~~~~~~~-~~~~~~~~~--~~g~Dv  238 (353)
T 4dup_A          170 SVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCE-ACERL---GAK----RGINYRSED-FAAVIKAET--GQGVDI  238 (353)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHH---TCS----EEEETTTSC-HHHHHHHHH--SSCEEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhc---CCC----EEEeCCchH-HHHHHHHHh--CCCceE
Confidence            4899999999999999999999999999999876543 33333   322    124655544 333333333  457999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+|+|.
T Consensus       239 vid~~g~  245 (353)
T 4dup_A          239 ILDMIGA  245 (353)
T ss_dssp             EEESCCG
T ss_pred             EEECCCH
Confidence            9999985

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.18  E-value=1.1e-05  Score=62.31  Aligned_cols=76  Identities=14%  Similarity=0.158  Sum_probs=51.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+||++++|...+..+...|++|+.+++++++.+. ++++   +.+ .   ..|..+. ++.+.+.+..  .+++|+
T Consensus       166 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~-~~~~---Ga~-~---~~~~~~~-~~~~~~~~~~--~~g~D~  234 (362)
T 2c0c_A          166 KVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF-LKSL---GCD-R---PINYKTE-PVGTVLKQEY--PEGVDV  234 (362)
T ss_dssp             EEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHT---TCS-E---EEETTTS-CHHHHHHHHC--TTCEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HHHc---CCc-E---EEecCCh-hHHHHHHHhc--CCCCCE
Confidence            48999999999999999999999999999988654332 3332   322 1   2355443 3444443331  247999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+|+|.
T Consensus       235 vid~~g~  241 (362)
T 2c0c_A          235 VYESVGG  241 (362)
T ss_dssp             EEECSCT
T ss_pred             EEECCCH
Confidence            9999974

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.16  E-value=3.4e-05  Score=59.07  Aligned_cols=77  Identities=14%  Similarity=0.165  Sum_probs=52.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+||++++|...+..+...|++|+.++++.++.+. ++++   +.+    ...|..++ ++.+.+.++... .++|+
T Consensus       167 ~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~~~~---Ga~----~~~~~~~~-~~~~~v~~~~~~-~g~D~  236 (349)
T 3pi7_A          167 AFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIAL-LKDI---GAA----HVLNEKAP-DFEATLREVMKA-EQPRI  236 (349)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHH-HHHH---TCS----EEEETTST-THHHHHHHHHHH-HCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHc---CCC----EEEECCcH-HHHHHHHHHhcC-CCCcE
Confidence            47899999999999999888899999999988765433 3333   322    12355443 333333333221 26999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+++|.
T Consensus       237 vid~~g~  243 (349)
T 3pi7_A          237 FLDAVTG  243 (349)
T ss_dssp             EEESSCH
T ss_pred             EEECCCC
Confidence            9999975

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.14  E-value=2.3e-06  Score=64.88  Aligned_cols=115  Identities=13%  Similarity=0.063  Sum_probs=68.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEee--ChhHHHHHHHHHhh---cCCCceeEEEeecCChhhHHHHHHHHHh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTAR--DEKRGLEAVEKLKH---SGFDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r--~~~~~~~~~~~l~~---~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      +++||||+|.+|..++..|+..|.  +++++++  +.+.++....++..   ..+.++.+...+  |  ++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chHH-------
Confidence            479999999999999999998874  5888887  54433332333322   111122222211  1  1222       


Q ss_pred             hcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEE
Q 035504           74 QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNV  153 (174)
Q Consensus        74 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~i  153 (174)
                      .+.+.|++||.||....+.                      .+.   ...++.|+.....+++++..+    ..+.|+++
T Consensus        71 al~gaD~Vi~~Ag~~~~~g----------------------~~r---~dl~~~N~~i~~~i~~~i~~~----~~~~vlv~  121 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKEG----------------------MSR---MDLAKTNAKIVGKYAKKIAEI----CDTKIFVI  121 (313)
T ss_dssp             GGTTCSEEEECCSCCCCTT----------------------CCH---HHHHHHHHHHHHHHHHHHHHH----CCCEEEEC
T ss_pred             HhCCCCEEEECCCCCCCCC----------------------CcH---HHHHHHHHHHHHHHHHHHHHh----CCeEEEEe
Confidence            2338999999999732110                      011   123889999998988888543    23455555


Q ss_pred             ec
Q 035504          154 SS  155 (174)
Q Consensus       154 sS  155 (174)
                      |.
T Consensus       122 SN  123 (313)
T 1hye_A          122 TN  123 (313)
T ss_dssp             SS
T ss_pred             cC
Confidence            44

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.14  E-value=9.6e-06  Score=62.57  Aligned_cols=71  Identities=17%  Similarity=0.230  Sum_probs=49.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh---hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE---KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +++|+|+ +++|...+..+...|++|++++++.   ++. +.++++   +   ...+  | .+  ++.+.+.+ . . ++
T Consensus       183 ~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~---g---a~~v--~-~~--~~~~~~~~-~-~-~~  246 (366)
T 2cdc_A          183 KVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEET---K---TNYY--N-SS--NGYDKLKD-S-V-GK  246 (366)
T ss_dssp             EEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHH---T---CEEE--E-CT--TCSHHHHH-H-H-CC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHh---C---Ccee--c-hH--HHHHHHHH-h-C-CC
Confidence            4899999 9999999999888999999999886   443 333333   2   2333  5 54  33222333 2 2 68


Q ss_pred             ccEEEecccc
Q 035504           78 LDILVNNAAI   87 (174)
Q Consensus        78 id~li~~ag~   87 (174)
                      +|++|+++|.
T Consensus       247 ~d~vid~~g~  256 (366)
T 2cdc_A          247 FDVIIDATGA  256 (366)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.12  E-value=2.3e-05  Score=59.27  Aligned_cols=78  Identities=22%  Similarity=0.227  Sum_probs=56.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC---hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD---EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +++|+|+ ||.|++++..|++.|+ +|.+++|+   .+++++.++++....+.  .....+..+.+...+.+.       
T Consensus       150 ~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~--~v~~~~~~~l~~~~~~l~-------  219 (312)
T 3t4e_A          150 TMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDC--VVTVTDLADQHAFTEALA-------  219 (312)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSC--EEEEEETTCHHHHHHHHH-------
T ss_pred             EEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCc--ceEEechHhhhhhHhhcc-------
Confidence            3789997 8999999999999998 79999999   77788888888765432  233345444322233222       


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      ..|++||+....
T Consensus       220 ~~DiIINaTp~G  231 (312)
T 3t4e_A          220 SADILTNGTKVG  231 (312)
T ss_dssp             HCSEEEECSSTT
T ss_pred             CceEEEECCcCC
Confidence            579999988764

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.07  E-value=1.5e-05  Score=60.97  Aligned_cols=76  Identities=20%  Similarity=0.207  Sum_probs=52.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+|+++++|..+++.+...|++|+.+++++++.+.. +++   +.+ .   ..|.++++ +.+.+.++.. ..++|+
T Consensus       169 ~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~~---ga~-~---~~d~~~~~-~~~~~~~~~~-~~~~d~  238 (343)
T 2eih_A          169 DVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA-KAL---GAD-E---TVNYTHPD-WPKEVRRLTG-GKGADK  238 (343)
T ss_dssp             EEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCS-E---EEETTSTT-HHHHHHHHTT-TTCEEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCC-E---EEcCCccc-HHHHHHHHhC-CCCceE
Confidence            489999999999999999999999999999986654333 333   222 1   25776653 3333333221 237999


Q ss_pred             EEeccc
Q 035504           81 LVNNAA   86 (174)
Q Consensus        81 li~~ag   86 (174)
                      +|+|+|
T Consensus       239 vi~~~g  244 (343)
T 2eih_A          239 VVDHTG  244 (343)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999998

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.05  E-value=1.4e-05  Score=60.89  Aligned_cols=77  Identities=12%  Similarity=0.162  Sum_probs=52.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+||++++|...+..+...|++|+.+++++++.+ .++++   +.+    ...|..+++..+. +.+... ..++|+
T Consensus       151 ~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~---ga~----~~~~~~~~~~~~~-~~~~~~-~~g~D~  220 (334)
T 3qwb_A          151 YVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAKEY---GAE----YLINASKEDILRQ-VLKFTN-GKGVDA  220 (334)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHT---TCS----EEEETTTSCHHHH-HHHHTT-TSCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHc---CCc----EEEeCCCchHHHH-HHHHhC-CCCceE
Confidence            4899999999999999999999999999999866543 33333   222    1245555433332 222211 236999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+|+|.
T Consensus       221 vid~~g~  227 (334)
T 3qwb_A          221 SFDSVGK  227 (334)
T ss_dssp             EEECCGG
T ss_pred             EEECCCh
Confidence            9999985

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.04  E-value=3.6e-05  Score=51.91  Aligned_cols=75  Identities=15%  Similarity=0.113  Sum_probs=54.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      .++|.|+ |.+|..+++.|.+.|++|++++++. +..++..+.+    ..++.++..|.++++.++++      ...+.|
T Consensus         5 ~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~----~~~~~~i~gd~~~~~~l~~a------~i~~ad   73 (153)
T 1id1_A            5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----GDNADVIPGDSNDSSVLKKA------GIDRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----CTTCEEEESCTTSHHHHHHH------TTTTCS
T ss_pred             cEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh----cCCCeEEEcCCCCHHHHHHc------ChhhCC
Confidence            3788986 9999999999999999999999974 3333332222    12377888999888766543      123778


Q ss_pred             EEEeccc
Q 035504           80 ILVNNAA   86 (174)
Q Consensus        80 ~li~~ag   86 (174)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (153)
T 1id1_A           74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEecC
Confidence            8888775

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.04  E-value=2.6e-05  Score=61.92  Aligned_cols=83  Identities=16%  Similarity=0.279  Sum_probs=56.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEE-Eee--------cCChhhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFH-QLD--------VADPATIHSLADFV   71 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~D--------v~~~~~i~~~~~~~   71 (174)
                      +++|+||++++|...+..+...|++++++.+++++.+ .++++   +.+.+.-. ..|        ..+.++++.+.+++
T Consensus       231 ~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~-~~~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i  306 (456)
T 3krt_A          231 NVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAE-ICRAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI  306 (456)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHH---TCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHH-HHHhh---CCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence            4899999999999999988889999999888765433 33444   32211100 011        23455666667777


Q ss_pred             HhhcC--CccEEEecccc
Q 035504           72 RSQFG--KLDILVNNAAI   87 (174)
Q Consensus        72 ~~~~g--~id~li~~ag~   87 (174)
                      .+..+  ++|++|.++|.
T Consensus       307 ~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          307 RELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHTSCCEEEEEECSCH
T ss_pred             HHHhCCCCCcEEEEcCCc
Confidence            76543  79999999975

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.03  E-value=2.9e-05  Score=51.15  Aligned_cols=72  Identities=17%  Similarity=0.261  Sum_probs=52.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|+|+ |.+|..+++.|.+.|++|++++++++..++..+    ..  .+.++..|.++.+.+.+      ....+.|.+
T Consensus         7 i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~----~~--~~~~~~~d~~~~~~l~~------~~~~~~d~v   73 (140)
T 1lss_A            7 IIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----EI--DALVINGDCTKIKTLED------AGIEDADMY   73 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HC--SSEEEESCTTSHHHHHH------TTTTTCSEE
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----hc--CcEEEEcCCCCHHHHHH------cCcccCCEE
Confidence            688887 999999999999999999999998665433322    21  25567778877665432      123478999


Q ss_pred             Eeccc
Q 035504           82 VNNAA   86 (174)
Q Consensus        82 i~~ag   86 (174)
                      |.+.+
T Consensus        74 i~~~~   78 (140)
T 1lss_A           74 IAVTG   78 (140)
T ss_dssp             EECCS
T ss_pred             EEeeC
Confidence            99974

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.00  E-value=1.4e-05  Score=62.01  Aligned_cols=72  Identities=14%  Similarity=0.222  Sum_probs=51.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+ |+||..+++.+...|++|++++++.+..+...+.+    +..+   ..+..+.+++.+++.       +.|+
T Consensus       170 ~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~----g~~~---~~~~~~~~~l~~~l~-------~aDv  234 (377)
T 2vhw_A          170 DVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF----CGRI---HTRYSSAYELEGAVK-------RADL  234 (377)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----TTSS---EEEECCHHHHHHHHH-------HCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc----CCee---EeccCCHHHHHHHHc-------CCCE
Confidence            4789998 99999999999999999999999876554433323    1222   234445555555443       6899


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|++++.
T Consensus       235 Vi~~~~~  241 (377)
T 2vhw_A          235 VIGAVLV  241 (377)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999875

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.99  E-value=2e-05  Score=58.42  Aligned_cols=72  Identities=18%  Similarity=0.228  Sum_probs=52.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+ ||+|++++..|++.|++|++++|+.+++++..+++...+  .+.  ..|+   +++.       +  +..|+
T Consensus       121 ~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~--~~~--~~~~---~~~~-------~--~~~Di  183 (272)
T 1p77_A          121 HVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG--NIQ--AVSM---DSIP-------L--QTYDL  183 (272)
T ss_dssp             EEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS--CEE--EEEG---GGCC-------C--SCCSE
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC--CeE--EeeH---HHhc-------c--CCCCE
Confidence            3789998 799999999999999999999999888778777765422  222  2333   1111       1  47999


Q ss_pred             EEecccccC
Q 035504           81 LVNNAAIFG   89 (174)
Q Consensus        81 li~~ag~~~   89 (174)
                      +||+++...
T Consensus       184 vIn~t~~~~  192 (272)
T 1p77_A          184 VINATSAGL  192 (272)
T ss_dssp             EEECCCC--
T ss_pred             EEECCCCCC
Confidence            999998743

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.97  E-value=1.7e-05  Score=59.93  Aligned_cols=90  Identities=12%  Similarity=0.126  Sum_probs=61.2

Q ss_pred             EEEecCCC-----------------c-hhHHHHHHHHHCCCeEEEEeeChhH--------HHHHHHHHhh--cCCCceeE
Q 035504            2 AVVTGANK-----------------G-IGYETVRQLASNGIIVVLTARDEKR--------GLEAVEKLKH--SGFDSVIF   53 (174)
Q Consensus         2 ~litGa~~-----------------g-iG~~~a~~l~~~g~~v~~~~r~~~~--------~~~~~~~l~~--~~~~~~~~   53 (174)
                      +|||+|+.                 | .|.++|+.++++|++|+++++...-        .....+.+..  ..+.....
T Consensus        40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~~~~~~  119 (313)
T 1p9o_A           40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALSGLLS  119 (313)
T ss_dssp             EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-CCSEEE
T ss_pred             EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccccccccce
Confidence            77887765                 6 9999999999999999999885321        0000111111  11223556


Q ss_pred             EEeecCChhhHHHHHHHH------------------------------HhhcCCccEEEecccccCcc
Q 035504           54 HQLDVADPATIHSLADFV------------------------------RSQFGKLDILVNNAAIFGVS   91 (174)
Q Consensus        54 ~~~Dv~~~~~i~~~~~~~------------------------------~~~~g~id~li~~ag~~~~~   91 (174)
                      +..|+...+++.+++.+.                              .+.++..|++|.+|++....
T Consensus       120 i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~  187 (313)
T 1p9o_A          120 LEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFY  187 (313)
T ss_dssp             EEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEE
T ss_pred             eeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhcc
Confidence            778888888887777544                              34568899999999997644

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.92  E-value=3.1e-05  Score=59.79  Aligned_cols=70  Identities=11%  Similarity=0.182  Sum_probs=55.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|| |++|+.+++.|.+ .++|.+.+++.+.+++..        ..+..+.+|+.|.+++.++++       +.|+|
T Consensus        19 ilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~--------~~~~~~~~d~~d~~~l~~~~~-------~~DvV   81 (365)
T 3abi_A           19 VLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK--------EFATPLKVDASNFDKLVEVMK-------EFELV   81 (365)
T ss_dssp             EEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT--------TTSEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             EEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh--------ccCCcEEEecCCHHHHHHHHh-------CCCEE
Confidence            788898 9999999998865 579999999876544431        236678899999998888776       78999


Q ss_pred             Eeccccc
Q 035504           82 VNNAAIF   88 (174)
Q Consensus        82 i~~ag~~   88 (174)
                      |++++..
T Consensus        82 i~~~p~~   88 (365)
T 3abi_A           82 IGALPGF   88 (365)
T ss_dssp             EECCCGG
T ss_pred             EEecCCc
Confidence            9998764

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.91  E-value=2.8e-05  Score=58.93  Aligned_cols=77  Identities=12%  Similarity=0.153  Sum_probs=52.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+||++++|...+..+...|++|+.+++++++.+ .++++   +.+    ...|..+.+..+++.+ .. ...++|+
T Consensus       143 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~---Ga~----~~~~~~~~~~~~~~~~-~~-~~~g~Dv  212 (325)
T 3jyn_A          143 IILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA-HAKAL---GAW----ETIDYSHEDVAKRVLE-LT-DGKKCPV  212 (325)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHHH---TCS----EEEETTTSCHHHHHHH-HT-TTCCEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHc---CCC----EEEeCCCccHHHHHHH-Hh-CCCCceE
Confidence            4899999999999999999889999999998866543 33333   222    1245555443333222 21 1137999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+|+|.
T Consensus       213 vid~~g~  219 (325)
T 3jyn_A          213 VYDGVGQ  219 (325)
T ss_dssp             EEESSCG
T ss_pred             EEECCCh
Confidence            9999985

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.90  E-value=4.4e-05  Score=58.34  Aligned_cols=76  Identities=20%  Similarity=0.207  Sum_probs=50.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+||+++||...+..+...|++|+.++++.++. +.++++   +.+.    ..|..  +++.+.+.++.. ..++|+
T Consensus       162 ~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~---ga~~----v~~~~--~~~~~~v~~~~~-~~g~Dv  230 (342)
T 4eye_A          162 TVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT-EFVKSV---GADI----VLPLE--EGWAKAVREATG-GAGVDM  230 (342)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHH---TCSE----EEESS--TTHHHHHHHHTT-TSCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhc---CCcE----EecCc--hhHHHHHHHHhC-CCCceE
Confidence            489999999999999999999999999999987654 333333   3221    12433  334333332211 126999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+|+|.
T Consensus       231 vid~~g~  237 (342)
T 4eye_A          231 VVDPIGG  237 (342)
T ss_dssp             EEESCC-
T ss_pred             EEECCch
Confidence            9999985

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.89  E-value=3.8e-05  Score=58.56  Aligned_cols=77  Identities=13%  Similarity=0.083  Sum_probs=51.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+|+++++|...+..+...|++|++++++.++.+. ++++   +.+    ...|..+.+ +.+.+.+.. ...++|+
T Consensus       147 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~l---ga~----~~~~~~~~~-~~~~~~~~~-~~~g~Dv  216 (340)
T 3gms_A          147 VLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE-LLRL---GAA----YVIDTSTAP-LYETVMELT-NGIGADA  216 (340)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHH-HHHH---TCS----EEEETTTSC-HHHHHHHHT-TTSCEEE
T ss_pred             EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHhC---CCc----EEEeCCccc-HHHHHHHHh-CCCCCcE
Confidence            48999999999999999888899999999988765433 3333   322    123555543 333222221 1237999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+|+|.
T Consensus       217 vid~~g~  223 (340)
T 3gms_A          217 AIDSIGG  223 (340)
T ss_dssp             EEESSCH
T ss_pred             EEECCCC
Confidence            9999985

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.88  E-value=7.3e-05  Score=57.65  Aligned_cols=73  Identities=18%  Similarity=0.185  Sum_probs=51.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+ |++|+++++.+...|++|++++|+.++.+...+...    ..+   ..+..+.+++.+.+.       +.|+
T Consensus       169 ~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~----~~~---~~~~~~~~~~~~~~~-------~~Dv  233 (361)
T 1pjc_A          169 KVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG----SRV---ELLYSNSAEIETAVA-------EADL  233 (361)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGS---EEEECCHHHHHHHHH-------TCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC----cee---EeeeCCHHHHHHHHc-------CCCE
Confidence            4799999 999999999999999999999999776555443322    112   122234444443332       7899


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      +|++++..
T Consensus       234 VI~~~~~~  241 (361)
T 1pjc_A          234 LIGAVLVP  241 (361)
T ss_dssp             EEECCCCT
T ss_pred             EEECCCcC
Confidence            99999863

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.87  E-value=2.2e-05  Score=58.97  Aligned_cols=73  Identities=16%  Similarity=0.145  Sum_probs=52.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ ||+|++++..|++.|+ +|++++|+.+++++.++++....+        ++.+.++       +.+.....|
T Consensus       143 ~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~--------~~~~~~~-------~~~~~~~aD  206 (297)
T 2egg_A          143 RILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS--------AYFSLAE-------AETRLAEYD  206 (297)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC--------CEECHHH-------HHHTGGGCS
T ss_pred             EEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC--------ceeeHHH-------HHhhhccCC
Confidence            3789998 7999999999999998 899999998777776665532110        1112222       333445799


Q ss_pred             EEEecccccC
Q 035504           80 ILVNNAAIFG   89 (174)
Q Consensus        80 ~li~~ag~~~   89 (174)
                      ++|++.+...
T Consensus       207 ivIn~t~~~~  216 (297)
T 2egg_A          207 IIINTTSVGM  216 (297)
T ss_dssp             EEEECSCTTC
T ss_pred             EEEECCCCCC
Confidence            9999998743

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.83  E-value=0.00014  Score=48.35  Aligned_cols=72  Identities=15%  Similarity=0.087  Sum_probs=54.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .++|.|+ |.+|..+++.|.+.|++|++++++++..++..    ..   .+.++..|.++++.++++      ...+.|.
T Consensus         9 ~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~~---g~~~i~gd~~~~~~l~~a------~i~~ad~   74 (140)
T 3fwz_A            9 HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----ER---GVRAVLGNAANEEIMQLA------HLECAKW   74 (140)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HT---TCEEEESCTTSHHHHHHT------TGGGCSE
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----Hc---CCCEEECCCCCHHHHHhc------CcccCCE
Confidence            3788887 88999999999999999999999976544432    22   367788999998765542      2236788


Q ss_pred             EEeccc
Q 035504           81 LVNNAA   86 (174)
Q Consensus        81 li~~ag   86 (174)
                      +|.+.+
T Consensus        75 vi~~~~   80 (140)
T 3fwz_A           75 LILTIP   80 (140)
T ss_dssp             EEECCS
T ss_pred             EEEECC
Confidence            888774

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.78  E-value=8.9e-05  Score=52.92  Aligned_cols=73  Identities=19%  Similarity=0.221  Sum_probs=53.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .++|.|+ |.+|..+++.|.++|++|++++++++..++..+..      +..++..|.++++.++++      .....|.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~------~~~~i~gd~~~~~~l~~a------~i~~ad~   68 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL------KATIIHGDGSHKEILRDA------EVSKNDV   68 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS------SSEEEESCTTSHHHHHHH------TCCTTCE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc------CCeEEEcCCCCHHHHHhc------CcccCCE
Confidence            4789997 88999999999999999999999877655443321      256778888887665532      2236777


Q ss_pred             EEeccc
Q 035504           81 LVNNAA   86 (174)
Q Consensus        81 li~~ag   86 (174)
                      +|.+.+
T Consensus        69 vi~~~~   74 (218)
T 3l4b_C           69 VVILTP   74 (218)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            777665

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.76  E-value=4.1e-05  Score=51.13  Aligned_cols=70  Identities=14%  Similarity=0.110  Sum_probs=50.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.|+ |++|..+++.|.+.|++|.+.+|+.+..++..+++.      ....     ..+++.+++.       ..|+
T Consensus        23 ~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~------~~~~-----~~~~~~~~~~-------~~Di   83 (144)
T 3oj0_A           23 KILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE------YEYV-----LINDIDSLIK-------NNDV   83 (144)
T ss_dssp             EEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT------CEEE-----ECSCHHHHHH-------TCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC------CceE-----eecCHHHHhc-------CCCE
Confidence            3788996 999999999999999998899999877666655542      1111     2233444443       6899


Q ss_pred             EEecccccC
Q 035504           81 LVNNAAIFG   89 (174)
Q Consensus        81 li~~ag~~~   89 (174)
                      +|++.+...
T Consensus        84 vi~at~~~~   92 (144)
T 3oj0_A           84 IITATSSKT   92 (144)
T ss_dssp             EEECSCCSS
T ss_pred             EEEeCCCCC
Confidence            999987643

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.76  E-value=0.00014  Score=55.45  Aligned_cols=74  Identities=18%  Similarity=0.197  Sum_probs=51.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+|+ +++|...+..+...|++|+.+++++++.+. ++++   +.+    ...|..++ ++.+.+.++.   +++|+
T Consensus       167 ~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~l---Ga~----~~~d~~~~-~~~~~~~~~~---~~~d~  233 (339)
T 1rjw_A          167 WVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL-AKEL---GAD----LVVNPLKE-DAAKFMKEKV---GGVHA  233 (339)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHT---TCS----EEECTTTS-CHHHHHHHHH---SSEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHC---CCC----EEecCCCc-cHHHHHHHHh---CCCCE
Confidence            4799999 889999999999999999999988665433 2333   222    12466654 3443333332   68999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+++|.
T Consensus       234 vid~~g~  240 (339)
T 1rjw_A          234 AVVTAVS  240 (339)
T ss_dssp             EEESSCC
T ss_pred             EEECCCC
Confidence            9999985

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.74  E-value=0.00016  Score=52.88  Aligned_cols=47  Identities=23%  Similarity=0.297  Sum_probs=37.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeCh-------------------hHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDE-------------------KRGLEAVEKLKHSGF   48 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~   48 (174)
                      +++|.|+ ||+|.++++.|++.|. ++.+++++.                   .+++..++.+.+..+
T Consensus        33 ~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np   99 (249)
T 1jw9_B           33 RVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP   99 (249)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT
T ss_pred             eEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC
Confidence            3788886 7999999999999997 799999876                   556666666665443

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.74  E-value=0.0002  Score=54.63  Aligned_cols=74  Identities=19%  Similarity=0.197  Sum_probs=50.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+||++++|...+..+...|++|+.+ ++.++. +.++++   +   ...  .| . .+++.+.+.+... ..++|+
T Consensus       153 ~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~-~~~~~l---G---a~~--i~-~-~~~~~~~~~~~~~-~~g~D~  219 (343)
T 3gaz_A          153 TVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDL-EYVRDL---G---ATP--ID-A-SREPEDYAAEHTA-GQGFDL  219 (343)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH-HHHHHH---T---SEE--EE-T-TSCHHHHHHHHHT-TSCEEE
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH-HHHHHc---C---CCE--ec-c-CCCHHHHHHHHhc-CCCceE
Confidence            48999999999999999999999999988 665543 333333   3   222  45 3 3344444443322 236999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+++|.
T Consensus       220 vid~~g~  226 (343)
T 3gaz_A          220 VYDTLGG  226 (343)
T ss_dssp             EEESSCT
T ss_pred             EEECCCc
Confidence            9999984

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.72  E-value=0.00021  Score=54.55  Aligned_cols=75  Identities=16%  Similarity=0.182  Sum_probs=50.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+||++++|...+..+...|++|+.++++.++. +.++++   +.+.    ..|..+  ++.+.+.++  ..+++|+
T Consensus       153 ~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~l---Ga~~----vi~~~~--~~~~~~~~~--~~~g~Dv  220 (346)
T 3fbg_A          153 TLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI-EWTKKM---GADI----VLNHKE--SLLNQFKTQ--GIELVDY  220 (346)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHH-HHHHHH---TCSE----EECTTS--CHHHHHHHH--TCCCEEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhc---CCcE----EEECCc--cHHHHHHHh--CCCCccE
Confidence            479999999999999999889999999999886543 333333   3221    123322  333333333  2347999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+++|.
T Consensus       221 v~d~~g~  227 (346)
T 3fbg_A          221 VFCTFNT  227 (346)
T ss_dssp             EEESSCH
T ss_pred             EEECCCc
Confidence            9999884

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.71  E-value=0.00026  Score=54.06  Aligned_cols=117  Identities=16%  Similarity=0.148  Sum_probs=70.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--e-----EEEEeeCh--hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--I-----VVLTARDE--KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~-----v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      +++||||+|.||..++..|+..|.  +     +++++.++  +.++-.+.+|+.......    .++....+..+     
T Consensus         5 kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~----~~~~~~~~~~~-----   75 (333)
T 5mdh_A            5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL----KDVIATDKEEI-----   75 (333)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE----EEEEEESCHHH-----
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc----CCEEEcCCcHH-----
Confidence            378999999999999999998774  5     89998864  234444555554211112    12222222222     


Q ss_pred             HhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCC-eE
Q 035504           72 RSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP-RI  150 (174)
Q Consensus        72 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~i  150 (174)
                        .+.+.|++|+.||....+           .+   .+..           .++.|+.....+.+.+..+   ...+ ++
T Consensus        76 --~~~daDvVvitAg~prkp-----------G~---tR~d-----------ll~~N~~i~~~i~~~i~~~---~~~~~~v  125 (333)
T 5mdh_A           76 --AFKDLDVAILVGSMPRRD-----------GM---ERKD-----------LLKANVKIFKCQGAALDKY---AKKSVKV  125 (333)
T ss_dssp             --HTTTCSEEEECCSCCCCT-----------TC---CTTT-----------THHHHHHHHHHHHHHHHHH---SCTTCEE
T ss_pred             --HhCCCCEEEEeCCCCCCC-----------CC---CHHH-----------HHHHHHHHHHHHHHHHHHh---CCCCeEE
Confidence              233889999999863211           11   1122           2788887777777666432   2235 47


Q ss_pred             EEEecC
Q 035504          151 VNVSSN  156 (174)
Q Consensus       151 v~isS~  156 (174)
                      +.+|.-
T Consensus       126 ivvsNP  131 (333)
T 5mdh_A          126 IVVGNP  131 (333)
T ss_dssp             EECSSS
T ss_pred             EEcCCc
Confidence            776653

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.69  E-value=0.0013  Score=50.45  Aligned_cols=78  Identities=18%  Similarity=0.234  Sum_probs=52.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc--CC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF--GK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~--g~   77 (174)
                      ++||.|+ +++|...+..+...|++ |+.+++++++. +.++++ .   ..+..+..|-.+.+++.+   ++.+..  .+
T Consensus       182 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~l-~---~~~~~~~~~~~~~~~~~~---~v~~~t~g~g  252 (363)
T 3m6i_A          182 PVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRL-KFAKEI-C---PEVVTHKVERLSAEESAK---KIVESFGGIE  252 (363)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHH-HHHHHH-C---TTCEEEECCSCCHHHHHH---HHHHHTSSCC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh-c---hhcccccccccchHHHHH---HHHHHhCCCC
Confidence            5899998 99999999888888997 88888886543 344444 2   234444455444444444   344333  37


Q ss_pred             ccEEEecccc
Q 035504           78 LDILVNNAAI   87 (174)
Q Consensus        78 id~li~~ag~   87 (174)
                      +|++|.++|.
T Consensus       253 ~Dvvid~~g~  262 (363)
T 3m6i_A          253 PAVALECTGV  262 (363)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999975

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.65  E-value=0.00083  Score=50.77  Aligned_cols=117  Identities=16%  Similarity=0.059  Sum_probs=70.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcCCC-ceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++.|+||+|.+|..++..|+..|  .+|+++++++  .+....++...... ++....    ...+.++++.       +
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~-------~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCLK-------G   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHT-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHhC-------C
Confidence            37899999999999999999888  6899999986  23334445432111 111110    0123433333       8


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      .|++|+.+|....+.           .+   ..           ..+..|+.....+++.+..+   .+.+.|+++|--.
T Consensus        69 aDvVvi~ag~~~~~g-----------~~---r~-----------dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv  120 (314)
T 1mld_A           69 CDVVVIPAGVPRKPG-----------MT---RD-----------DLFNTNATIVATLTAACAQH---CPDAMICIISNPV  120 (314)
T ss_dssp             CSEEEECCSCCCCTT-----------CC---GG-----------GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCH
T ss_pred             CCEEEECCCcCCCCC-----------Cc---HH-----------HHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCc
Confidence            899999999743211           00   11           12677777666666666443   2346777765543


Q ss_pred             C
Q 035504          158 G  158 (174)
Q Consensus       158 ~  158 (174)
                      .
T Consensus       121 ~  121 (314)
T 1mld_A          121 N  121 (314)
T ss_dssp             H
T ss_pred             c
Confidence            3

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.65  E-value=0.00011  Score=52.12  Aligned_cols=41  Identities=20%  Similarity=0.283  Sum_probs=34.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVE   41 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   41 (174)
                      +++|+||+|.+|.++++.|++.|++|.+.+|+.+..++..+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   42 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAA   42 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            36899999999999999999999999999998766555443

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.65  E-value=5.3e-05  Score=51.19  Aligned_cols=73  Identities=21%  Similarity=0.135  Sum_probs=50.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|+ |.+|..+++.|.+.|++|++++++++..+.    +...  .....+..|.++.+.+.++      ...+.|.+
T Consensus        22 v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~----~~~~--~g~~~~~~d~~~~~~l~~~------~~~~ad~V   88 (155)
T 2g1u_A           22 IVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR----LNSE--FSGFTVVGDAAEFETLKEC------GMEKADMV   88 (155)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG----SCTT--CCSEEEESCTTSHHHHHTT------TGGGCSEE
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH----HHhc--CCCcEEEecCCCHHHHHHc------CcccCCEE
Confidence            688886 999999999999999999999998765322    2211  1245666777765443221      13468999


Q ss_pred             Eecccc
Q 035504           82 VNNAAI   87 (174)
Q Consensus        82 i~~ag~   87 (174)
                      |.+.+.
T Consensus        89 i~~~~~   94 (155)
T 2g1u_A           89 FAFTND   94 (155)
T ss_dssp             EECSSC
T ss_pred             EEEeCC
Confidence            988853

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.64  E-value=0.0001  Score=51.09  Aligned_cols=73  Identities=15%  Similarity=0.195  Sum_probs=51.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      .++|.|+ |.+|..+++.|.+. |++|++++++++..++.    .+.   .+..+..|.++.+.+.++     ....+.|
T Consensus        41 ~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~~---g~~~~~gd~~~~~~l~~~-----~~~~~ad  107 (183)
T 3c85_A           41 QVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQH----RSE---GRNVISGDATDPDFWERI-----LDTGHVK  107 (183)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HHT---TCCEEECCTTCHHHHHTB-----CSCCCCC
T ss_pred             cEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HHC---CCCEEEcCCCCHHHHHhc-----cCCCCCC
Confidence            3688885 99999999999999 99999999987654432    222   255667788876644322     0134688


Q ss_pred             EEEeccc
Q 035504           80 ILVNNAA   86 (174)
Q Consensus        80 ~li~~ag   86 (174)
                      .+|.+.+
T Consensus       108 ~vi~~~~  114 (183)
T 3c85_A          108 LVLLAMP  114 (183)
T ss_dssp             EEEECCS
T ss_pred             EEEEeCC
Confidence            8888775

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.63  E-value=0.00024  Score=54.32  Aligned_cols=76  Identities=16%  Similarity=0.230  Sum_probs=49.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||+|+ +++|...+..+...|+ +|+.+++++++. +.++++   +.+    ...|..++ ++.+.+.++.. ..++|
T Consensus       170 ~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~~~---Ga~----~~~~~~~~-~~~~~v~~~~~-g~g~D  238 (348)
T 2d8a_A          170 SVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRR-ELAKKV---GAD----YVINPFEE-DVVKEVMDITD-GNGVD  238 (348)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH-HHHHHH---TCS----EEECTTTS-CHHHHHHHHTT-TSCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh---CCC----EEECCCCc-CHHHHHHHHcC-CCCCC
Confidence            5899999 9999999998888999 899999886543 333333   222    12354443 33333332211 12699


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|+++|.
T Consensus       239 ~vid~~g~  246 (348)
T 2d8a_A          239 VFLEFSGA  246 (348)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999974

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.62  E-value=0.00017  Score=53.97  Aligned_cols=71  Identities=20%  Similarity=0.208  Sum_probs=48.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+++++|...+..+...|++|+.+++++++.+.. +++   +.+    ...|..+.+++   .+++    +++|+
T Consensus       128 ~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---ga~----~~~~~~~~~~~---~~~~----~~~d~  192 (302)
T 1iz0_A          128 KVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LAL---GAE----EAATYAEVPER---AKAW----GGLDL  192 (302)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHT---TCS----EEEEGGGHHHH---HHHT----TSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCC----EEEECCcchhH---HHHh----cCceE
Confidence            489999999999999999989999999999986654332 333   222    12354431222   1222    57999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+ +|.
T Consensus       193 vid-~g~  198 (302)
T 1iz0_A          193 VLE-VRG  198 (302)
T ss_dssp             EEE-CSC
T ss_pred             EEE-CCH
Confidence            999 875

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.62  E-value=0.00023  Score=53.00  Aligned_cols=70  Identities=16%  Similarity=0.241  Sum_probs=52.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|+|+ ||+|++++..|++.|+ +|.+++|+.+++++.++++...+  .+...  ++.+   +.          ...|
T Consensus       128 ~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~~~~~--~~~~---l~----------~~aD  189 (281)
T 3o8q_A          128 TILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--EVKAQ--AFEQ---LK----------QSYD  189 (281)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--CEEEE--EGGG---CC----------SCEE
T ss_pred             EEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--CeeEe--eHHH---hc----------CCCC
Confidence            3789998 6999999999999996 89999999888888888876543  23332  2211   11          3789


Q ss_pred             EEEeccccc
Q 035504           80 ILVNNAAIF   88 (174)
Q Consensus        80 ~li~~ag~~   88 (174)
                      ++||+....
T Consensus       190 iIInaTp~g  198 (281)
T 3o8q_A          190 VIINSTSAS  198 (281)
T ss_dssp             EEEECSCCC
T ss_pred             EEEEcCcCC
Confidence            999988653

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.57  E-value=0.00013  Score=56.15  Aligned_cols=72  Identities=21%  Similarity=0.303  Sum_probs=49.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+|+ +++|...+..+...|++|+++++++++.+...+++   +.+    ...|..+.+.+       .+..+++|+
T Consensus       190 ~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~----~v~~~~~~~~~-------~~~~~~~D~  254 (366)
T 1yqd_A          190 HIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---GAD----SFLVSRDQEQM-------QAAAGTLDG  254 (366)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---CCS----EEEETTCHHHH-------HHTTTCEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---CCc----eEEeccCHHHH-------HHhhCCCCE
Confidence            4799996 99999999998889999999998876544333232   222    12455554332       222358999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+++|.
T Consensus       255 vid~~g~  261 (366)
T 1yqd_A          255 IIDTVSA  261 (366)
T ss_dssp             EEECCSS
T ss_pred             EEECCCc
Confidence            9999985

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.53  E-value=0.00026  Score=54.69  Aligned_cols=74  Identities=20%  Similarity=0.320  Sum_probs=49.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+||++++|...+..+...|++|+.++ +.++ .+.++++   +.+ .   ..|..+.+ +.   +++.+ .+++|+
T Consensus       186 ~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~-~~~~~~l---Ga~-~---v~~~~~~~-~~---~~~~~-~~g~D~  251 (375)
T 2vn8_A          186 RVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDA-SELVRKL---GAD-D---VIDYKSGS-VE---EQLKS-LKPFDF  251 (375)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGG-HHHHHHT---TCS-E---EEETTSSC-HH---HHHHT-SCCBSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHH-HHHHHHc---CCC-E---EEECCchH-HH---HHHhh-cCCCCE
Confidence            489999999999999998888999998887 4333 2333333   322 1   23555433 22   22222 357999


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      +|+++|..
T Consensus       252 vid~~g~~  259 (375)
T 2vn8_A          252 ILDNVGGS  259 (375)
T ss_dssp             EEESSCTT
T ss_pred             EEECCCCh
Confidence            99999864

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.52  E-value=0.00035  Score=53.61  Aligned_cols=83  Identities=14%  Similarity=0.083  Sum_probs=49.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC--hhhHHHHHHHHHh-hcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD--PATIHSLADFVRS-QFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~-~~g~   77 (174)
                      ++||+||++++|...+..+...|++++.+.++.++..+..+.+++.+.+.+    .|..+  .+++.+.+.++.. ..++
T Consensus       170 ~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v----i~~~~~~~~~~~~~i~~~t~~~~~g  245 (364)
T 1gu7_A          170 WFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV----ITEDQNNSREFGPTIKEWIKQSGGE  245 (364)
T ss_dssp             EEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE----EEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             EEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEE----EecCccchHHHHHHHHHHhhccCCC
Confidence            489999999999999887777899998888765432222222233332311    23222  0233333333321 1247


Q ss_pred             ccEEEecccc
Q 035504           78 LDILVNNAAI   87 (174)
Q Consensus        78 id~li~~ag~   87 (174)
                      +|++|.++|.
T Consensus       246 ~Dvvid~~G~  255 (364)
T 1gu7_A          246 AKLALNCVGG  255 (364)
T ss_dssp             EEEEEESSCH
T ss_pred             ceEEEECCCc
Confidence            9999999985

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.52  E-value=0.00063  Score=50.90  Aligned_cols=84  Identities=18%  Similarity=0.269  Sum_probs=54.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeCh------------------hHHHHHHHHHhhcCCC-ceeEEEeecCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDE------------------KRGLEAVEKLKHSGFD-SVIFHQLDVAD   60 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~------------------~~~~~~~~~l~~~~~~-~~~~~~~Dv~~   60 (174)
                      +++|.|+ ||+|.++++.|++.|. ++.+++.+.                  .+++..++.+++..+. ++..+..++++
T Consensus        38 ~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~  116 (292)
T 3h8v_A           38 AVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITT  116 (292)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTTS
T ss_pred             eEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCCc
Confidence            3678877 8999999999999995 788888754                  3455555666665544 45566666766


Q ss_pred             hhhHHHHHHHHHhh----cCCccEEEecc
Q 035504           61 PATIHSLADFVRSQ----FGKLDILVNNA   85 (174)
Q Consensus        61 ~~~i~~~~~~~~~~----~g~id~li~~a   85 (174)
                      .+.++.+++.+...    ..+.|+||.+.
T Consensus       117 ~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          117 VENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             HHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             HHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            55565555433221    13567666553

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.52  E-value=0.00038  Score=51.59  Aligned_cols=70  Identities=20%  Similarity=0.297  Sum_probs=51.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|+|+ ||+|++++..|++.|+ +|.+++|+.+++++.++++.. +  .+...  ++   +++.       +  ...|
T Consensus       122 ~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~--~~~~~--~~---~~l~-------~--~~~D  183 (272)
T 3pwz_A          122 RVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-S--RLRIS--RY---EALE-------G--QSFD  183 (272)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-T--TEEEE--CS---GGGT-------T--CCCS
T ss_pred             EEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-C--CeeEe--eH---HHhc-------c--cCCC
Confidence            3789998 6999999999999996 899999998888888777754 1  23332  22   2211       0  3789


Q ss_pred             EEEeccccc
Q 035504           80 ILVNNAAIF   88 (174)
Q Consensus        80 ~li~~ag~~   88 (174)
                      ++||+....
T Consensus       184 ivInaTp~g  192 (272)
T 3pwz_A          184 IVVNATSAS  192 (272)
T ss_dssp             EEEECSSGG
T ss_pred             EEEECCCCC
Confidence            999987653

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.46  E-value=0.00055  Score=52.63  Aligned_cols=75  Identities=17%  Similarity=0.155  Sum_probs=51.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+| ++++|...+..+...|++|+.+++++++.+. ++++   +.+    ...| .+.+++.+.+.++.. ..++|+
T Consensus       192 ~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~~~l---Ga~----~vi~-~~~~~~~~~v~~~~~-g~g~D~  260 (363)
T 3uog_A          192 RVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFAL---GAD----HGIN-RLEEDWVERVYALTG-DRGADH  260 (363)
T ss_dssp             EEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHH---TCS----EEEE-TTTSCHHHHHHHHHT-TCCEEE
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH-HHHc---CCC----EEEc-CCcccHHHHHHHHhC-CCCceE
Confidence            479999 7999999999888899999999988664333 3443   322    1235 454555554444432 126999


Q ss_pred             EEeccc
Q 035504           81 LVNNAA   86 (174)
Q Consensus        81 li~~ag   86 (174)
                      +|.++|
T Consensus       261 vid~~g  266 (363)
T 3uog_A          261 ILEIAG  266 (363)
T ss_dssp             EEEETT
T ss_pred             EEECCC
Confidence            999998

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.45  E-value=0.00023  Score=53.87  Aligned_cols=75  Identities=21%  Similarity=0.164  Sum_probs=47.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+|+++++|...+..+...|++|+.+++++++.+. ++++   +.+.    ..|..+.+  .+.+.++  ..+++|+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~-~~~l---Ga~~----~i~~~~~~--~~~~~~~--~~~~~d~  219 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY-LRVL---GAKE----VLAREDVM--AERIRPL--DKQRWAA  219 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH-HHHT---TCSE----EEECC-----------C--CSCCEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHc---CCcE----EEecCCcH--HHHHHHh--cCCcccE
Confidence            48999999999999999888899999999988654333 3333   3221    13444332  1222222  1247999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|+++|.
T Consensus       220 vid~~g~  226 (328)
T 1xa0_A          220 AVDPVGG  226 (328)
T ss_dssp             EEECSTT
T ss_pred             EEECCcH
Confidence            9999985

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.33  E-value=0.0033  Score=47.85  Aligned_cols=113  Identities=12%  Similarity=0.071  Sum_probs=70.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhc--CCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHS--GFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|+|+ |.+|..++..|+.+|.  ++++++.+.+.++..+.+|...  ..........  .|.++           +..
T Consensus        22 V~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~~-----------~~~   87 (331)
T 4aj2_A           22 ITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYSV-----------TAN   87 (331)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGGG-----------GTT
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHHH-----------hCC
Confidence            678997 8999999999999986  7999999877666666666532  1111122222  23332           237


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      .|++|.++|....+           .++   ...           .++.|+.-..-+.+.+..+   .+.+.++.+|.-
T Consensus        88 aDiVvi~aG~~~kp-----------G~t---R~d-----------L~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNP  138 (331)
T 4aj2_A           88 SKLVIITAGARQQE-----------GES---RLN-----------LVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNP  138 (331)
T ss_dssp             EEEEEECCSCCCCT-----------TCC---GGG-----------GHHHHHHHHHHHHHHHHHH---CTTCEEEECSSS
T ss_pred             CCEEEEccCCCCCC-----------Ccc---HHH-----------HHHHHHHHHHHHHHHHHHH---CCCeEEEEecCh
Confidence            89999999974321           111   112           2777776655666555433   334677777653

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.31  E-value=0.00092  Score=52.28  Aligned_cols=68  Identities=21%  Similarity=0.302  Sum_probs=48.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ |++|..+++.|...|+ +|++++|+.+++.+.++++.      ...  .   +.+++.+.+.       +.|
T Consensus       169 ~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g------~~~--~---~~~~l~~~l~-------~aD  229 (404)
T 1gpj_A          169 TVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG------GEA--V---RFDELVDHLA-------RSD  229 (404)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT------CEE--C---CGGGHHHHHH-------TCS
T ss_pred             EEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC------Cce--e---cHHhHHHHhc-------CCC
Confidence            4789998 9999999999999998 89999999776656555542      111  1   2233443332       689


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|++.+.
T Consensus       230 vVi~at~~  237 (404)
T 1gpj_A          230 VVVSATAA  237 (404)
T ss_dssp             EEEECCSS
T ss_pred             EEEEccCC
Confidence            99988764

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.27  E-value=0.0018  Score=49.50  Aligned_cols=78  Identities=27%  Similarity=0.270  Sum_probs=49.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC-hhhHHHHHHHHHh-hcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD-PATIHSLADFVRS-QFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~-~~g~i   78 (174)
                      ++||+|+ +++|...+..+...|++|+.+++++++. +.++++   +.+    ...|..+ .+..+++.+...+ ..+++
T Consensus       171 ~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~l---Ga~----~~~~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          171 TVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKNC---GAD----VTLVVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHT---TCS----EEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHH-HHHHHh---CCC----EEEcCcccccHHHHHHHHhccccCCCC
Confidence            4799997 8999999998888999988888876543 333333   322    1235554 3333333322210 02479


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|+++|.
T Consensus       242 D~vid~~g~  250 (352)
T 1e3j_A          242 NVTIDCSGN  250 (352)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999985

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.25  E-value=0.0011  Score=51.17  Aligned_cols=76  Identities=14%  Similarity=0.187  Sum_probs=51.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC-hhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD-PATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~g~i   78 (174)
                      ++||+|+ +++|...+..+...|+ +|+.+++++++.+ .++++   +.+    ...|..+ .+++.+.+.++..  +++
T Consensus       195 ~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~-~~~~l---Ga~----~vi~~~~~~~~~~~~~~~~~~--~g~  263 (374)
T 1cdo_A          195 TCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFE-KAKVF---GAT----DFVNPNDHSEPISQVLSKMTN--GGV  263 (374)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHT---TCC----EEECGGGCSSCHHHHHHHHHT--SCB
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHH-HHHHh---CCc----eEEeccccchhHHHHHHHHhC--CCC
Confidence            4799995 8999999998888999 7999988866543 33333   222    1235543 2345555555443  479


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|+++|.
T Consensus       264 D~vid~~g~  272 (374)
T 1cdo_A          264 DFSLECVGN  272 (374)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.24  E-value=0.0014  Score=50.10  Aligned_cols=73  Identities=16%  Similarity=0.132  Sum_probs=49.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcC-C-CceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSG-F-DSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~-~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++.|+|++|.+|..++..++..|  .+|++++.+.+.++....+|+... + .++.+       ..+..+.++       
T Consensus        10 KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-------t~d~~~al~-------   75 (343)
T 3fi9_A           10 KLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-------TSDIKEALT-------   75 (343)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-------ESCHHHHHT-------
T ss_pred             EEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-------cCCHHHHhC-------
Confidence            37899999999999999999998  479999998776665555554321 1 11221       112222232       


Q ss_pred             CccEEEecccc
Q 035504           77 KLDILVNNAAI   87 (174)
Q Consensus        77 ~id~li~~ag~   87 (174)
                      +.|++|.++|.
T Consensus        76 dADvVvitaG~   86 (343)
T 3fi9_A           76 DAKYIVSSGGA   86 (343)
T ss_dssp             TEEEEEECCC-
T ss_pred             CCCEEEEccCC
Confidence            78999999997

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.19  E-value=0.0037  Score=47.49  Aligned_cols=72  Identities=11%  Similarity=0.082  Sum_probs=50.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCC--CceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|+|+ |.+|..++..|+..|.  ++++++++++.++-...++....+  ..+.....   +.+           .+.+
T Consensus        12 V~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~~-----------a~~~   76 (326)
T 3vku_A           12 VILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EYS-----------DAKD   76 (326)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CGG-----------GGTT
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cHH-----------HhcC
Confidence            688996 9999999999999886  899999987766655555543211  12332221   222           2337


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      .|++|..+|..
T Consensus        77 aDiVvi~ag~~   87 (326)
T 3vku_A           77 ADLVVITAGAP   87 (326)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999973

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.19  E-value=0.0011  Score=51.06  Aligned_cols=76  Identities=13%  Similarity=0.204  Sum_probs=50.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC-hhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD-PATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~g~i   78 (174)
                      ++||+|+ +++|...+..+...|+ +|+.+++++++.+ .++++   +.+    ...|..+ .+++.+.+.++..  +++
T Consensus       194 ~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~-~~~~l---Ga~----~vi~~~~~~~~~~~~~~~~~~--~g~  262 (374)
T 2jhf_A          194 TCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFA-KAKEV---GAT----ECVNPQDYKKPIQEVLTEMSN--GGV  262 (374)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHT---TCS----EEECGGGCSSCHHHHHHHHTT--SCB
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHh---CCc----eEecccccchhHHHHHHHHhC--CCC
Confidence            4799995 8999999998888999 7999988866543 33333   222    1235443 2345554544432  479


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.++|.
T Consensus       263 D~vid~~g~  271 (374)
T 2jhf_A          263 DFSFEVIGR  271 (374)
T ss_dssp             SEEEECSCC
T ss_pred             cEEEECCCC
Confidence            999999985

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.19  E-value=0.00064  Score=52.52  Aligned_cols=76  Identities=14%  Similarity=0.191  Sum_probs=51.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC-hhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD-PATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~g~i   78 (174)
                      ++||.|+ +++|...+..+...|+ +|+.+++++++.+ .++++   +.+.    ..|..+ .+++.+.+.++..  +++
T Consensus       196 ~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~-~a~~l---Ga~~----vi~~~~~~~~~~~~i~~~~~--gg~  264 (378)
T 3uko_A          196 NVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYE-TAKKF---GVNE----FVNPKDHDKPIQEVIVDLTD--GGV  264 (378)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHH-HHHTT---TCCE----EECGGGCSSCHHHHHHHHTT--SCB
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHc---CCcE----EEccccCchhHHHHHHHhcC--CCC
Confidence            5899998 9999999888888899 7999988866533 33333   3221    234442 3455555544432  379


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.++|.
T Consensus       265 D~vid~~g~  273 (378)
T 3uko_A          265 DYSFECIGN  273 (378)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999985

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.18  E-value=0.0015  Score=49.56  Aligned_cols=74  Identities=19%  Similarity=0.295  Sum_probs=49.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+|+ +++|...+..+...|++|+.+++++++.+ .++++   +.+ .   ..|..+++ ..+.+.   +..+++|.
T Consensus       169 ~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~l---Ga~-~---~i~~~~~~-~~~~~~---~~~g~~d~  235 (340)
T 3s2e_A          169 WVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLN-LARRL---GAE-V---AVNARDTD-PAAWLQ---KEIGGAHG  235 (340)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHT---TCS-E---EEETTTSC-HHHHHH---HHHSSEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHc---CCC-E---EEeCCCcC-HHHHHH---HhCCCCCE
Confidence            4789987 89999999888889999999998866533 33333   322 1   23554433 333232   23468999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|.++|.
T Consensus       236 vid~~g~  242 (340)
T 3s2e_A          236 VLVTAVS  242 (340)
T ss_dssp             EEESSCC
T ss_pred             EEEeCCC
Confidence            9999873

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.17  E-value=0.00086  Score=51.07  Aligned_cols=74  Identities=14%  Similarity=0.180  Sum_probs=49.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||+|+ +++|...+..+...|+ +|+.+++++++.+ .++++    .+    ...|..+ +++.+.+.++.  ..++|
T Consensus       167 ~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~-~~~~l----a~----~v~~~~~-~~~~~~~~~~~--~~g~D  233 (343)
T 2dq4_A          167 SVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA-FARPY----AD----RLVNPLE-EDLLEVVRRVT--GSGVE  233 (343)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG-GGTTT----CS----EEECTTT-SCHHHHHHHHH--SSCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHh----HH----hccCcCc-cCHHHHHHHhc--CCCCC
Confidence            5899999 9999999998888999 8999998865422 22222    11    1234444 34444444443  34799


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.++|.
T Consensus       234 ~vid~~g~  241 (343)
T 2dq4_A          234 VLLEFSGN  241 (343)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999985

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.16  E-value=0.0012  Score=50.60  Aligned_cols=76  Identities=17%  Similarity=0.168  Sum_probs=49.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||+|+ +++|...+..+... |++|+.+++++++.+ .++++   +.+.    ..|..++  +.+.+.++.. ..++|
T Consensus       189 ~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~-~~~~l---Ga~~----vi~~~~~--~~~~v~~~~~-g~g~D  256 (359)
T 1h2b_A          189 YVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLK-LAERL---GADH----VVDARRD--PVKQVMELTR-GRGVN  256 (359)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHH-HHHHT---TCSE----EEETTSC--HHHHHHHHTT-TCCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHh---CCCE----EEeccch--HHHHHHHHhC-CCCCc
Confidence            4899999 89999998877778 999999998865433 33333   3221    2355443  4333333321 12799


Q ss_pred             EEEeccccc
Q 035504           80 ILVNNAAIF   88 (174)
Q Consensus        80 ~li~~ag~~   88 (174)
                      ++|.++|..
T Consensus       257 vvid~~G~~  265 (359)
T 1h2b_A          257 VAMDFVGSQ  265 (359)
T ss_dssp             EEEESSCCH
T ss_pred             EEEECCCCc
Confidence            999999853

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.15  E-value=0.0016  Score=50.27  Aligned_cols=76  Identities=13%  Similarity=0.186  Sum_probs=50.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC-hhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD-PATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~g~i   78 (174)
                      ++||+|+ +++|...+..+...|+ +|+.+++++++.+ .++++   +.+    ...|..+ .+++.+.+.++..  +++
T Consensus       198 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l---Ga~----~vi~~~~~~~~~~~~v~~~~~--~g~  266 (376)
T 1e3i_A          198 TCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKAL---GAT----DCLNPRELDKPVQDVITELTA--GGV  266 (376)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHT---TCS----EEECGGGCSSCHHHHHHHHHT--SCB
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHh---CCc----EEEccccccchHHHHHHHHhC--CCc
Confidence            4799996 8999999988888899 7999988866533 33333   222    1234443 2345554544433  479


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.++|.
T Consensus       267 Dvvid~~G~  275 (376)
T 1e3i_A          267 DYSLDCAGT  275 (376)
T ss_dssp             SEEEESSCC
T ss_pred             cEEEECCCC
Confidence            999999985

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.13  E-value=0.002  Score=49.54  Aligned_cols=75  Identities=16%  Similarity=0.240  Sum_probs=47.2

Q ss_pred             CEEEecCCCchhHHHHHHHHH-CCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLAS-NGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||+||++++|...+..+.. .|++|+.+++++++.+ .++++   +.+.    ..|..+  ++.+.+.++  ..+++|
T Consensus       174 ~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~-~~~~l---Gad~----vi~~~~--~~~~~v~~~--~~~g~D  241 (363)
T 4dvj_A          174 AILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQE-WVKSL---GAHH----VIDHSK--PLAAEVAAL--GLGAPA  241 (363)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHH-HHHHT---TCSE----EECTTS--CHHHHHHTT--CSCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-HHHHc---CCCE----EEeCCC--CHHHHHHHh--cCCCce
Confidence            489999999999988876655 5899999998865433 33333   3221    123322  333323222  234799


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.++|.
T Consensus       242 vvid~~g~  249 (363)
T 4dvj_A          242 FVFSTTHT  249 (363)
T ss_dssp             EEEECSCH
T ss_pred             EEEECCCc
Confidence            99999874

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.13  E-value=0.0013  Score=48.61  Aligned_cols=41  Identities=22%  Similarity=0.215  Sum_probs=35.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL   43 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   43 (174)
                      +++|.|+ ||.|++++..|.+.|.+|.+++|+.+++++.+ ++
T Consensus       120 ~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          120 NALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            3788987 99999999999999999999999988777766 54

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.13  E-value=0.0011  Score=50.95  Aligned_cols=76  Identities=13%  Similarity=0.180  Sum_probs=50.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC-hhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD-PATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~g~i   78 (174)
                      ++||+|+ +++|...+..+...|+ +|+.+++++++.+ .++++   +.+.    ..|..+ .+++.+.+.++..  +++
T Consensus       193 ~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~-~~~~l---Ga~~----vi~~~~~~~~~~~~v~~~~~--~g~  261 (373)
T 2fzw_A          193 VCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEF---GATE----CINPQDFSKPIQEVLIEMTD--GGV  261 (373)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHH---TCSE----EECGGGCSSCHHHHHHHHTT--SCB
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHc---CCce----EeccccccccHHHHHHHHhC--CCC
Confidence            4799996 8999999988777898 7999988766533 33344   2221    234443 2345554444432  479


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.++|.
T Consensus       262 D~vid~~g~  270 (373)
T 2fzw_A          262 DYSFECIGN  270 (373)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCc
Confidence            999999985

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.12  E-value=0.00072  Score=51.03  Aligned_cols=71  Identities=13%  Similarity=0.226  Sum_probs=47.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+||++++|...+..+...|++|+.+.+. ++ .+.++++   +.+.    ..|..+.+.+.+       ...++|+
T Consensus       155 ~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~-~~~~~~l---Ga~~----~i~~~~~~~~~~-------~~~g~D~  218 (321)
T 3tqh_A          155 VVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RN-HAFLKAL---GAEQ----CINYHEEDFLLA-------ISTPVDA  218 (321)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HH-HHHHHHH---TCSE----EEETTTSCHHHH-------CCSCEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-ch-HHHHHHc---CCCE----EEeCCCcchhhh-------hccCCCE
Confidence            47999999999999999888899999888743 33 3344443   3221    235444432222       2257999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|.++|.
T Consensus       219 v~d~~g~  225 (321)
T 3tqh_A          219 VIDLVGG  225 (321)
T ss_dssp             EEESSCH
T ss_pred             EEECCCc
Confidence            9999884

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.12  E-value=0.0061  Score=46.29  Aligned_cols=71  Identities=20%  Similarity=0.191  Sum_probs=49.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|+|+ |.+|.+++..|+..|.  +|++++++.+.++..+.+|+..   .+..+.....   +.+           .+.
T Consensus         8 I~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~---~~~-----------a~~   72 (326)
T 3pqe_A            8 VALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYG---TYE-----------DCK   72 (326)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEE---CGG-----------GGT
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeC---cHH-----------HhC
Confidence            678996 9999999999999886  8999999877666655555542   1122333322   222           223


Q ss_pred             CccEEEecccc
Q 035504           77 KLDILVNNAAI   87 (174)
Q Consensus        77 ~id~li~~ag~   87 (174)
                      ..|++|.++|.
T Consensus        73 ~aDvVvi~ag~   83 (326)
T 3pqe_A           73 DADIVCICAGA   83 (326)
T ss_dssp             TCSEEEECCSC
T ss_pred             CCCEEEEeccc
Confidence            78999999987

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.08  E-value=0.0036  Score=47.91  Aligned_cols=76  Identities=22%  Similarity=0.254  Sum_probs=48.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecC--ChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA--DPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~--~~~~i~~~~~~~~~~~g~   77 (174)
                      ++||+|+ +++|...+..+...|+ +|+.+++++++. +.++++   +.+    ...|..  +.++..+.+.+...  ++
T Consensus       174 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~l---Ga~----~vi~~~~~~~~~~~~~i~~~~~--~g  242 (356)
T 1pl8_A          174 KVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRL-SKAKEI---GAD----LVLQISKESPQEIARKVEGQLG--CK  242 (356)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHT---TCS----EEEECSSCCHHHHHHHHHHHHT--SC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh---CCC----EEEcCcccccchHHHHHHHHhC--CC
Confidence            4789996 8999999988878899 899998886543 333333   322    123443  22333333322222  57


Q ss_pred             ccEEEecccc
Q 035504           78 LDILVNNAAI   87 (174)
Q Consensus        78 id~li~~ag~   87 (174)
                      +|++|.++|.
T Consensus       243 ~D~vid~~g~  252 (356)
T 1pl8_A          243 PEVTIECTGA  252 (356)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.07  E-value=0.0028  Score=47.46  Aligned_cols=73  Identities=18%  Similarity=0.044  Sum_probs=48.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhh---cCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKH---SGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|.|+ |.+|.+++..|++.|.  +|++.+++++.++....++..   ..+....+...  +|++.+           .
T Consensus         3 I~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a~-----------~   68 (294)
T 1oju_A            3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL-----------K   68 (294)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGGG-----------T
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHHh-----------C
Confidence            678999 9999999999999987  899999988765433333322   12222222222  233332           2


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      +.|++|..+|..
T Consensus        69 ~aDiVViaag~~   80 (294)
T 1oju_A           69 GSEIIVVTAGLA   80 (294)
T ss_dssp             TCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            789999999873

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.06  E-value=0.0027  Score=46.41  Aligned_cols=31  Identities=29%  Similarity=0.505  Sum_probs=25.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|.++++.|++.|. ++.+++++
T Consensus        30 ~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           30 QVLIIGL-GGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3788887 7899999999999997 67887553

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.05  E-value=0.0031  Score=48.74  Aligned_cols=77  Identities=17%  Similarity=0.105  Sum_probs=49.7

Q ss_pred             CEEEec-CCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTG-ANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litG-a~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||.| |++++|...+..+...|++|+.+++++++.+ .++++   +.+.    ..|..++ ++.+.+.++... .++|
T Consensus       173 ~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~-~~~~l---Ga~~----~~~~~~~-~~~~~v~~~t~~-~g~d  242 (379)
T 3iup_A          173 SALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQAD-LLKAQ---GAVH----VCNAASP-TFMQDLTEALVS-TGAT  242 (379)
T ss_dssp             SCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHH-HHHHT---TCSC----EEETTST-THHHHHHHHHHH-HCCC
T ss_pred             EEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHhC---CCcE----EEeCCCh-HHHHHHHHHhcC-CCce
Confidence            468886 8999999999888888999999998865433 33333   3221    2344443 333333333221 2699


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.++|.
T Consensus       243 ~v~d~~g~  250 (379)
T 3iup_A          243 IAFDATGG  250 (379)
T ss_dssp             EEEESCEE
T ss_pred             EEEECCCc
Confidence            99999985

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.04  E-value=0.00052  Score=50.34  Aligned_cols=66  Identities=20%  Similarity=0.221  Sum_probs=45.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ ||.|++++..|.+.|+ +|.+++|+.+++++..++        +...  +   .+++.+.+.       ..|
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~--------~~~~--~---~~~~~~~~~-------~aD  168 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFP--------VKIF--S---LDQLDEVVK-------KAK  168 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSS--------CEEE--E---GGGHHHHHH-------TCS
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH--------cccC--C---HHHHHhhhc-------CCC
Confidence            4788887 8999999999999998 899999997654443221        1111  1   233443333       689


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++||+...
T Consensus       169 iVInatp~  176 (253)
T 3u62_A          169 SLFNTTSV  176 (253)
T ss_dssp             EEEECSST
T ss_pred             EEEECCCC
Confidence            99998754

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.03  E-value=0.0007  Score=51.93  Aligned_cols=72  Identities=22%  Similarity=0.318  Sum_probs=47.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+|+ +++|...+..+...|++|+.+++++++.+...+++   +.+.+    .|..+.+.+       .+..+++|+
T Consensus       183 ~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~v----i~~~~~~~~-------~~~~~g~D~  247 (357)
T 2cf5_A          183 RGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL---GADDY----VIGSDQAKM-------SELADSLDY  247 (357)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS---CCSCE----EETTCHHHH-------HHSTTTEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc---CCcee----eccccHHHH-------HHhcCCCCE
Confidence            4789995 99999999888788999999998866433332222   32211    244443222       222357999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|.++|.
T Consensus       248 vid~~g~  254 (357)
T 2cf5_A          248 VIDTVPV  254 (357)
T ss_dssp             EEECCCS
T ss_pred             EEECCCC
Confidence            9999985

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.01  E-value=0.0021  Score=49.49  Aligned_cols=75  Identities=16%  Similarity=0.235  Sum_probs=48.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||.||++++|...+..+...|++|+.+. ++++ .+.++++   +.+    ...|..+.+ +.+.+.++.  .+++|+
T Consensus       167 ~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~-~~~~~~l---Ga~----~vi~~~~~~-~~~~v~~~t--~g~~d~  234 (371)
T 3gqv_A          167 YVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHN-FDLAKSR---GAE----EVFDYRAPN-LAQTIRTYT--KNNLRY  234 (371)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGG-HHHHHHT---TCS----EEEETTSTT-HHHHHHHHT--TTCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHH-HHHHHHc---CCc----EEEECCCch-HHHHHHHHc--cCCccE
Confidence            489999999999999998888999988886 4443 3344443   322    123544433 333333221  245999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|.++|.
T Consensus       235 v~d~~g~  241 (371)
T 3gqv_A          235 ALDCITN  241 (371)
T ss_dssp             EEESSCS
T ss_pred             EEECCCc
Confidence            9999885

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.01  E-value=0.00027  Score=52.53  Aligned_cols=37  Identities=19%  Similarity=0.184  Sum_probs=32.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLE   38 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~   38 (174)
                      +++|+|+ ||+|++++..|.+.|+ +|.+++|+.+++++
T Consensus       119 ~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~  156 (277)
T 3don_A          119 YILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN  156 (277)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence            4789997 7999999999999998 89999999765443

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.99  E-value=0.0017  Score=50.06  Aligned_cols=71  Identities=20%  Similarity=0.276  Sum_probs=48.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||.|+ +++|...+..+...|++|+.+++++++.+. ++++   +.+.    ..|..+.+.++    ++   .+++|+
T Consensus       197 ~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~-a~~l---Ga~~----vi~~~~~~~~~----~~---~~g~Dv  260 (369)
T 1uuf_A          197 KVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL---GADE----VVNSRNADEMA----AH---LKSFDF  260 (369)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH---TCSE----EEETTCHHHHH----TT---TTCEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHc---CCcE----EeccccHHHHH----Hh---hcCCCE
Confidence            4789998 889999998888899999999988665433 3333   2221    23554443222    22   157999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|.++|.
T Consensus       261 vid~~g~  267 (369)
T 1uuf_A          261 ILNTVAA  267 (369)
T ss_dssp             EEECCSS
T ss_pred             EEECCCC
Confidence            9999985

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.99  E-value=0.0011  Score=51.11  Aligned_cols=77  Identities=19%  Similarity=0.248  Sum_probs=48.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHH-hhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVR-SQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~~g~i   78 (174)
                      ++||.|+ +++|...+..+...|+ +|+.+++++++ .+.++++   +.+    ...|..+.+ +.+.+.+.. ...+++
T Consensus       185 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~-~~~a~~l---Ga~----~vi~~~~~~-~~~~i~~~~~~~~gg~  254 (370)
T 4ej6_A          185 TVAILGG-GVIGLLTVQLARLAGATTVILSTRQATK-RRLAEEV---GAT----ATVDPSAGD-VVEAIAGPVGLVPGGV  254 (370)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHH-HHHHHHH---TCS----EEECTTSSC-HHHHHHSTTSSSTTCE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHH-HHHHHHc---CCC----EEECCCCcC-HHHHHHhhhhccCCCC
Confidence            4789998 8999999988888999 78888887654 3344444   222    123444433 332222211 122479


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.++|.
T Consensus       255 Dvvid~~G~  263 (370)
T 4ej6_A          255 DVVIECAGV  263 (370)
T ss_dssp             EEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999884

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.99  E-value=0.0043  Score=47.92  Aligned_cols=75  Identities=20%  Similarity=0.205  Sum_probs=48.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecC--ChhhHHHHHHHHHhhc-C
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA--DPATIHSLADFVRSQF-G   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~--~~~~i~~~~~~~~~~~-g   76 (174)
                      ++||+| ++++|...+..+...| ++|+.+++++++.+ .++++   +.+  .  ..|..  +.+++.+   ++.+.. +
T Consensus       198 ~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~~~~l---Ga~--~--vi~~~~~~~~~~~~---~v~~~~~g  265 (380)
T 1vj0_A          198 TVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLK-LAEEI---GAD--L--TLNRRETSVEERRK---AIMDITHG  265 (380)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHH-HHHHT---TCS--E--EEETTTSCHHHHHH---HHHHHTTT
T ss_pred             EEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHH-HHHHc---CCc--E--EEeccccCcchHHH---HHHHHhCC
Confidence            489999 8999999999888899 59999998865433 33333   322  1  12433  1333333   333332 2


Q ss_pred             -CccEEEecccc
Q 035504           77 -KLDILVNNAAI   87 (174)
Q Consensus        77 -~id~li~~ag~   87 (174)
                       ++|++|.++|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence             69999999985

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.98  E-value=0.00084  Score=51.50  Aligned_cols=72  Identities=17%  Similarity=0.179  Sum_probs=48.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+|+ +++|...+..+...|++|+.+++++++.+ .++++   +.+.    ..|..+..+..   +++.   +++|+
T Consensus       182 ~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~-~~~~l---Ga~~----v~~~~~~~~~~---~~~~---~~~D~  246 (360)
T 1piw_A          182 KVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE-DAMKM---GADH----YIATLEEGDWG---EKYF---DTFDL  246 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHH---TCSE----EEEGGGTSCHH---HHSC---SCEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHc---CCCE----EEcCcCchHHH---HHhh---cCCCE
Confidence            4899999 99999999888888999999998766543 33333   2221    23444431221   2221   58999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|.++|.
T Consensus       247 vid~~g~  253 (360)
T 1piw_A          247 IVVCASS  253 (360)
T ss_dssp             EEECCSC
T ss_pred             EEECCCC
Confidence            9999986

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.97  E-value=0.0018  Score=49.88  Aligned_cols=76  Identities=18%  Similarity=0.214  Sum_probs=49.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC-hhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD-PATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~g~i   78 (174)
                      ++||.|+ +++|...+..+...|+ +|+.+++++++.+ .++++   +.+    ...|..+ .+++.+.+.++..  +++
T Consensus       194 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l---Ga~----~vi~~~~~~~~~~~~i~~~t~--gg~  262 (373)
T 1p0f_A          194 TCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFP-KAIEL---GAT----ECLNPKDYDKPIYEVICEKTN--GGV  262 (373)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHT---TCS----EEECGGGCSSCHHHHHHHHTT--SCB
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHH-HHHHc---CCc----EEEecccccchHHHHHHHHhC--CCC
Confidence            4799996 8999999887777898 7989988766533 33333   222    1234443 1345444444322  479


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.++|.
T Consensus       263 Dvvid~~g~  271 (373)
T 1p0f_A          263 DYAVECAGR  271 (373)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999985

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.96  E-value=0.00065  Score=52.09  Aligned_cols=33  Identities=21%  Similarity=0.399  Sum_probs=27.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++||.||++++|...+..+...|++++.+.++.
T Consensus       170 ~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~  202 (357)
T 1zsy_A          170 SVIQNASNSGVGQAVIQIAAALGLRTINVVRDR  202 (357)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             EEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence            489999999999998887777899988777653

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.96  E-value=0.0021  Score=49.19  Aligned_cols=72  Identities=17%  Similarity=0.286  Sum_probs=47.9

Q ss_pred             CEEEecCCCchhHHH-HHHH-HHCCCe-EEEEeeChh---HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhh
Q 035504            1 YAVVTGANKGIGYET-VRQL-ASNGII-VVLTARDEK---RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQ   74 (174)
Q Consensus         1 ~~litGa~~giG~~~-a~~l-~~~g~~-v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   74 (174)
                      ++||+|+ +++|... +..+ ...|++ |+.++++++   +. +.++++   +   ...+  |..++ ++.+ +.++   
T Consensus       175 ~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~-~~~~~l---G---a~~v--~~~~~-~~~~-i~~~---  239 (357)
T 2b5w_A          175 SAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI-DIIEEL---D---ATYV--DSRQT-PVED-VPDV---  239 (357)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH-HHHHHT---T---CEEE--ETTTS-CGGG-HHHH---
T ss_pred             EEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH-HHHHHc---C---Cccc--CCCcc-CHHH-HHHh---
Confidence            4899999 9999999 7766 567997 999998765   43 333333   2   2333  55543 3333 4444   


Q ss_pred             cCCccEEEecccc
Q 035504           75 FGKLDILVNNAAI   87 (174)
Q Consensus        75 ~g~id~li~~ag~   87 (174)
                      .+++|++|.++|.
T Consensus       240 ~gg~Dvvid~~g~  252 (357)
T 2b5w_A          240 YEQMDFIYEATGF  252 (357)
T ss_dssp             SCCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999985

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.93  E-value=0.0012  Score=47.54  Aligned_cols=69  Identities=14%  Similarity=0.192  Sum_probs=47.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|+ +.+|..+++.|.+.|+ |++++++++...+.    .    .++.++..|.+|.+.++++      ...+.|.+
T Consensus        12 viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~----~----~~~~~i~gd~~~~~~l~~a------~i~~ad~v   75 (234)
T 2aef_A           12 VVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL----R----SGANFVHGDPTRVSDLEKA------NVRGARAV   75 (234)
T ss_dssp             EEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH----H----TTCEEEESCTTCHHHHHHT------TCTTCSEE
T ss_pred             EEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH----h----cCCeEEEcCCCCHHHHHhc------CcchhcEE
Confidence            688887 8999999999999999 99998886654332    2    1266777888777655432      12255666


Q ss_pred             Eeccc
Q 035504           82 VNNAA   86 (174)
Q Consensus        82 i~~ag   86 (174)
                      |.+.+
T Consensus        76 i~~~~   80 (234)
T 2aef_A           76 IVDLE   80 (234)
T ss_dssp             EECCS
T ss_pred             EEcCC
Confidence            66543

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.90  E-value=0.018  Score=44.05  Aligned_cols=77  Identities=21%  Similarity=0.207  Sum_probs=46.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-------eEEEEeeChh--HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-------IVVLTARDEK--RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-------~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      ++.|+||+|+||..++..|++...       ++.+.+..+.  .++-..-+|+........  ...+++  +..+     
T Consensus        26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~--~~~~~~--~~~~-----   96 (345)
T 4h7p_A           26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLD--KVVVTA--DPRV-----   96 (345)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEE--EEEEES--CHHH-----
T ss_pred             EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCC--cEEEcC--ChHH-----
Confidence            378999999999999999998642       6888887643  223333344432111111  111111  1122     


Q ss_pred             HhhcCCccEEEeccccc
Q 035504           72 RSQFGKLDILVNNAAIF   88 (174)
Q Consensus        72 ~~~~g~id~li~~ag~~   88 (174)
                        .+.+.|++|..||..
T Consensus        97 --a~~~advVvi~aG~p  111 (345)
T 4h7p_A           97 --AFDGVAIAIMCGAFP  111 (345)
T ss_dssp             --HTTTCSEEEECCCCC
T ss_pred             --HhCCCCEEEECCCCC
Confidence              244899999999974

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.89  E-value=0.024  Score=42.82  Aligned_cols=112  Identities=21%  Similarity=0.055  Sum_probs=65.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeC--hhHHHHHHHHHhhcC---CCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARD--EKRGLEAVEKLKHSG---FDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~--~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      +.|.|+ |.+|..++..|+..|. +|++.+++  .+.++-...++....   .....+...  +|.+           .+
T Consensus        11 v~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~~-----------a~   76 (315)
T 3tl2_A           11 VSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDYA-----------DT   76 (315)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG-----------GG
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCHH-----------Hh
Confidence            678897 9999999999999999 99999998  433333333332210   011122211  1222           23


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS  155 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS  155 (174)
                      ...|++|.++|....+.           +   ..           ...++.|+.-..-+.+.+..+   .+.+.++.+|.
T Consensus        77 ~~aDvVIiaag~p~kpg-----------~---~R-----------~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsN  128 (315)
T 3tl2_A           77 ADSDVVVITAGIARKPG-----------M---SR-----------DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTN  128 (315)
T ss_dssp             TTCSEEEECCSCCCCTT-----------C---CH-----------HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCS
T ss_pred             CCCCEEEEeCCCCCCCC-----------C---CH-----------HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCC
Confidence            47999999999733210           0   01           123667766555555555433   34467777764

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.88  E-value=0.016  Score=43.92  Aligned_cols=73  Identities=18%  Similarity=0.074  Sum_probs=48.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|.|+ |.+|.+++..|+..|. +|++.+++++.++....++...   .+....+...  +|.+.           +..
T Consensus        10 I~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~~a-----------~~~   75 (324)
T 3gvi_A           10 IALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDYAA-----------IEG   75 (324)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSGGG-----------GTT
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCHHH-----------HCC
Confidence            678998 9999999999999998 9999999876655444444321   1111222211  12222           237


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      .|++|..+|..
T Consensus        76 aDiVIiaag~p   86 (324)
T 3gvi_A           76 ADVVIVTAGVP   86 (324)
T ss_dssp             CSEEEECCSCC
T ss_pred             CCEEEEccCcC
Confidence            89999999873

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.87  E-value=0.0083  Score=45.59  Aligned_cols=72  Identities=15%  Similarity=0.135  Sum_probs=49.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhc--CCCceeEE-EeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHS--GFDSVIFH-QLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~-~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|+|+ |.+|..++..|+..|.  +|++.+.+++.++..+.++...  ........ ..|.   ++           +.
T Consensus        24 V~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~---~~-----------~~   88 (330)
T 3ldh_A           24 ITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY---SV-----------SA   88 (330)
T ss_dssp             EEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS---CS-----------CS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH---HH-----------hC
Confidence            678998 9999999999999986  8999999877665555555432  11111222 2233   22           23


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      ..|++|.++|..
T Consensus        89 daDiVIitaG~p  100 (330)
T 3ldh_A           89 GSKLVVITAGAR  100 (330)
T ss_dssp             SCSEEEECCSCC
T ss_pred             CCCEEEEeCCCC
Confidence            789999999974

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.86  E-value=0.0034  Score=49.24  Aligned_cols=38  Identities=24%  Similarity=0.254  Sum_probs=32.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA   39 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   39 (174)
                      .++|.|. |-+|..+++.|.++|.+|++++++++..++.
T Consensus         6 ~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~   43 (413)
T 3l9w_A            6 RVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETL   43 (413)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence            3788887 7799999999999999999999997765443

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.85  E-value=0.0067  Score=46.28  Aligned_cols=56  Identities=18%  Similarity=0.131  Sum_probs=38.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeCh-------------------hHHHHHHHHHhhcCCC-ceeEEEee
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDE-------------------KRGLEAVEKLKHSGFD-SVIFHQLD   57 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~~D   57 (174)
                      +++|.|+ ||+|.++++.|++.|. ++.+++++.                   .+++..++.+++..+. ++..+..+
T Consensus        36 ~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~  112 (340)
T 3rui_A           36 KVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLS  112 (340)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEecc
Confidence            3678887 8999999999999996 688887642                   3455556667666554 34444433

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.82  E-value=0.0078  Score=46.69  Aligned_cols=76  Identities=16%  Similarity=0.175  Sum_probs=49.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||.|+ +++|...+..+...|+ +|+.+++++++. +.++++   +   ..  ..|.++.+.+.+.+.++.. ..++|
T Consensus       188 ~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~-~~a~~l---G---a~--~i~~~~~~~~~~~v~~~t~-g~g~D  256 (398)
T 1kol_A          188 TVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKAQ---G---FE--IADLSLDTPLHEQIAALLG-EPEVD  256 (398)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHT---T---CE--EEETTSSSCHHHHHHHHHS-SSCEE
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHH-HHHHHc---C---Cc--EEccCCcchHHHHHHHHhC-CCCCC
Confidence            4789995 9999999887777898 688888876543 333333   2   22  2455554444433333321 12699


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.++|.
T Consensus       257 vvid~~G~  264 (398)
T 1kol_A          257 CAVDAVGF  264 (398)
T ss_dssp             EEEECCCT
T ss_pred             EEEECCCC
Confidence            99999985

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.78  E-value=0.022  Score=42.14  Aligned_cols=39  Identities=21%  Similarity=0.110  Sum_probs=32.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVE   41 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   41 (174)
                      +.|.|+ |.+|..+|..|++.|++|++.+++++..++..+
T Consensus         7 V~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            7 VTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKK   45 (283)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            567776 889999999999999999999999876655443

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.76  E-value=0.0021  Score=48.97  Aligned_cols=67  Identities=22%  Similarity=0.354  Sum_probs=45.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||.|+ +++|...+..+...|++|+.+++++++.+ .++++   +.+.+.      ++.+.+.+          ++|+
T Consensus       179 ~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~l---Ga~~v~------~~~~~~~~----------~~D~  237 (348)
T 3two_A          179 KVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ-DALSM---GVKHFY------TDPKQCKE----------ELDF  237 (348)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH-HHHHT---TCSEEE------SSGGGCCS----------CEEE
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHhc---CCCeec------CCHHHHhc----------CCCE
Confidence            4789997 89999999888889999999998876543 33333   322221      33333221          6888


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      +|.++|..
T Consensus       238 vid~~g~~  245 (348)
T 3two_A          238 IISTIPTH  245 (348)
T ss_dssp             EEECCCSC
T ss_pred             EEECCCcH
Confidence            88888753

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.75  E-value=0.016  Score=43.70  Aligned_cols=73  Identities=15%  Similarity=0.112  Sum_probs=48.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|+|+ |.+|..++..|++.|.  +|++.+++++.++-...+++..   .+....+...|  +.++           +.
T Consensus         3 v~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~a-----------~~   68 (314)
T 3nep_X            3 VTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYGP-----------TE   68 (314)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSGG-----------GT
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHHH-----------hC
Confidence            678997 9999999999999886  8999999876655444444321   11123332222  3332           33


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      ..|++|.++|..
T Consensus        69 ~aDvVii~ag~~   80 (314)
T 3nep_X           69 DSDVCIITAGLP   80 (314)
T ss_dssp             TCSEEEECCCC-
T ss_pred             CCCEEEECCCCC
Confidence            789999999874

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.73  E-value=0.0022  Score=48.83  Aligned_cols=74  Identities=23%  Similarity=0.272  Sum_probs=47.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHC--CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN--GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++||+|+ +++|...+..+...  |++|+.+++++++. +.++++   +.+.+    .|..+.   ...+.++.+ ..++
T Consensus       173 ~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~-~~~~~l---Ga~~v----i~~~~~---~~~~~~~~~-g~g~  239 (344)
T 2h6e_A          173 VVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHR-DFALEL---GADYV----SEMKDA---ESLINKLTD-GLGA  239 (344)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHH-HHHHHH---TCSEE----ECHHHH---HHHHHHHHT-TCCE
T ss_pred             EEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HHHHHh---CCCEE----eccccc---hHHHHHhhc-CCCc
Confidence            4899999 89999999888788  99999999886543 333333   32211    233220   122333332 2279


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.++|.
T Consensus       240 D~vid~~g~  248 (344)
T 2h6e_A          240 SIAIDLVGT  248 (344)
T ss_dssp             EEEEESSCC
T ss_pred             cEEEECCCC
Confidence            999999985

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.72  E-value=0.005  Score=47.97  Aligned_cols=76  Identities=20%  Similarity=0.238  Sum_probs=48.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||.|+ +++|...+..+...|+ +|+.+++++++. +.++++   +.+.    ..|..+. ++.+.+.++.. ..++|
T Consensus       216 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~~l---Ga~~----vi~~~~~-~~~~~i~~~t~-g~g~D  284 (404)
T 3ip1_A          216 NVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRR-NLAKEL---GADH----VIDPTKE-NFVEAVLDYTN-GLGAK  284 (404)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHHHH---TCSE----EECTTTS-CHHHHHHHHTT-TCCCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHc---CCCE----EEcCCCC-CHHHHHHHHhC-CCCCC
Confidence            4799998 8999999988888999 899988876543 344444   2221    2344333 33333332211 12699


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.++|.
T Consensus       285 ~vid~~g~  292 (404)
T 3ip1_A          285 LFLEATGV  292 (404)
T ss_dssp             EEEECSSC
T ss_pred             EEEECCCC
Confidence            99999986

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.70  E-value=0.017  Score=43.63  Aligned_cols=72  Identities=15%  Similarity=0.149  Sum_probs=46.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCC--CceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++.|+|+ |.+|..++..|+..|.  +|++.+.+.+.++....++....+  .++.+. .  .+.++           +.
T Consensus         9 KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~~a-----------~~   73 (318)
T 1y6j_A            9 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDYSD-----------VK   73 (318)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCHHH-----------hC
Confidence            4789998 9999999999999987  899999987655544555543211  112221 1  12222           34


Q ss_pred             CccEEEecccc
Q 035504           77 KLDILVNNAAI   87 (174)
Q Consensus        77 ~id~li~~ag~   87 (174)
                      ..|++|..+|.
T Consensus        74 ~aDvVii~~g~   84 (318)
T 1y6j_A           74 DCDVIVVTAGA   84 (318)
T ss_dssp             TCSEEEECCCC
T ss_pred             CCCEEEEcCCC
Confidence            89999999987

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.69  E-value=0.024  Score=42.48  Aligned_cols=72  Identities=19%  Similarity=0.254  Sum_probs=47.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCC--CceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++.|.|+ |.+|..++..|+..|.  +|++.+++++.++....++....+  ....+..   .+.++           +.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~a-----------~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHSE-----------LA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHHH-----------hC
Confidence            3678998 9999999999999998  899999987655444444432211  1122221   23222           23


Q ss_pred             CccEEEecccc
Q 035504           77 KLDILVNNAAI   87 (174)
Q Consensus        77 ~id~li~~ag~   87 (174)
                      +.|++|.++|.
T Consensus        67 ~aDvVIi~~~~   77 (304)
T 2v6b_A           67 DAQVVILTAGA   77 (304)
T ss_dssp             TCSEEEECC--
T ss_pred             CCCEEEEcCCC
Confidence            78999999986

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.65  E-value=0.031  Score=42.32  Aligned_cols=73  Identities=15%  Similarity=0.049  Sum_probs=48.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcC---CCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSG---FDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|+|+ |.+|.+++..|+..|. +|++.+++++.++....++....   +....+...  .|.+.           +.+
T Consensus         8 I~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~a-----------~~~   73 (321)
T 3p7m_A            8 ITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYKD-----------LEN   73 (321)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG-----------GTT
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHHH-----------HCC
Confidence            678885 9999999999999987 99999998766554445554321   111222211  23332           237


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      .|++|..+|..
T Consensus        74 aDvVIi~ag~p   84 (321)
T 3p7m_A           74 SDVVIVTAGVP   84 (321)
T ss_dssp             CSEEEECCSCC
T ss_pred             CCEEEEcCCcC
Confidence            89999999873

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.64  E-value=0.0099  Score=48.68  Aligned_cols=56  Identities=18%  Similarity=0.131  Sum_probs=39.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeCh-------------------hHHHHHHHHHhhcCCC-ceeEEEee
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDE-------------------KRGLEAVEKLKHSGFD-SVIFHQLD   57 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~~D   57 (174)
                      +++|.|+ ||+|.++++.|++.|. ++.+++.+.                   .+++..++.+++..+. ++..+..+
T Consensus       328 rVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~~  404 (615)
T 4gsl_A          328 KVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLS  404 (615)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEeecc
Confidence            3788887 8999999999999996 688887753                   3455566667666554 34444433

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.55  E-value=0.033  Score=41.98  Aligned_cols=114  Identities=14%  Similarity=0.061  Sum_probs=66.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-C--CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEe-ecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASN-G--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQL-DVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++.|+||+|.+|..++..|..+ +  .++++++.++ ...-...+++... ....+... .-.++++           +.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~-~~~~v~~~~~~~~~~~-----------~~   68 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP-TAVKIKGFSGEDATPA-----------LE   68 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSC-SSEEEEEECSSCCHHH-----------HT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCC-CCceEEEecCCCcHHH-----------hC
Confidence            3789999999999999999875 4  4799999876 3333444554332 11222211 0012222           23


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS  155 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS  155 (174)
                      +.|++|..+|....+.           +   ..           ...++.|..-...+.+.+..+   .+.+.++.+|.
T Consensus        69 ~aDivii~ag~~rkpG-----------~---~R-----------~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtN  119 (312)
T 3hhp_A           69 GADVVLISAGVARKPG-----------M---DR-----------SDLFNVNAGIVKNLVQQVAKT---CPKACIGIITN  119 (312)
T ss_dssp             TCSEEEECCSCSCCTT-----------C---CH-----------HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred             CCCEEEEeCCCCCCCC-----------C---CH-----------HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecC
Confidence            8999999999732110           1   11           123677766655555555433   23466776664

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.54  E-value=0.0086  Score=46.76  Aligned_cols=37  Identities=22%  Similarity=0.151  Sum_probs=31.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE   38 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   38 (174)
                      +++|.|+ |.+|...++.+...|++|++++++....+.
T Consensus       174 ~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~  210 (401)
T 1x13_A          174 KVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQ  210 (401)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence            4789997 899999999999999999999998765444

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.54  E-value=0.056  Score=40.37  Aligned_cols=74  Identities=18%  Similarity=0.042  Sum_probs=49.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|.|+ |+||..++..|..++.  ++++++.+++.++-.+.+|...   -+........  .|.+++           .
T Consensus         3 V~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~~~-----------~   68 (294)
T 2x0j_A            3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL-----------K   68 (294)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGGGG-----------T
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHHHh-----------C
Confidence            678895 9999999999998873  7999999876555555555431   1122233322  233332           3


Q ss_pred             CccEEEecccccC
Q 035504           77 KLDILVNNAAIFG   89 (174)
Q Consensus        77 ~id~li~~ag~~~   89 (174)
                      +-|++|..||...
T Consensus        69 ~aDvVvitAG~pr   81 (294)
T 2x0j_A           69 GSEIIVVTAGLAR   81 (294)
T ss_dssp             TCSEEEECCCCCC
T ss_pred             CCCEEEEecCCCC
Confidence            7899999999743

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.50  E-value=0.0075  Score=49.30  Aligned_cols=55  Identities=18%  Similarity=0.154  Sum_probs=38.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeC-------------------hhHHHHHHHHHhhcCCC-ceeEEEee
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARD-------------------EKRGLEAVEKLKHSGFD-SVIFHQLD   57 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~-~~~~~~~D   57 (174)
                      ++|.|+ ||+|.++++.|++.|. ++.+++.+                   ..+++..++.+++..+. ++..+..+
T Consensus       330 VLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~  405 (598)
T 3vh1_A          330 VLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLS  405 (598)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEecc
Confidence            688887 8999999999999996 68888553                   13455666777765544 34444433

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.50  E-value=0.0049  Score=49.04  Aligned_cols=71  Identities=18%  Similarity=0.255  Sum_probs=50.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|+ |-+|..+|+.|.++|++|++++++++..++..+.+      .+..+..|-++++-++++=      ....|.+
T Consensus         6 iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~Ag------i~~ad~~   72 (461)
T 4g65_A            6 IIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEAG------AQDADML   72 (461)
T ss_dssp             EEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHHT------TTTCSEE
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhcC------CCcCCEE
Confidence            577777 78999999999999999999999987665554443      2566777777766554431      1245666


Q ss_pred             Eecc
Q 035504           82 VNNA   85 (174)
Q Consensus        82 i~~a   85 (174)
                      |...
T Consensus        73 ia~t   76 (461)
T 4g65_A           73 VAVT   76 (461)
T ss_dssp             EECC
T ss_pred             EEEc
Confidence            6543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.49  E-value=0.0067  Score=46.58  Aligned_cols=31  Identities=35%  Similarity=0.554  Sum_probs=26.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|.++++.|++.|. ++.+++++
T Consensus       120 ~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D  151 (353)
T 3h5n_A          120 KVVILGC-GGIGNHVSVILATSGIGEIILIDND  151 (353)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEECCC
Confidence            3788887 8999999999999996 68888875

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.49  E-value=0.048  Score=41.17  Aligned_cols=72  Identities=17%  Similarity=0.162  Sum_probs=49.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcC--CCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSG--FDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|+|+ |.+|..++..|+..+.  ++++.+.+.+.++....++....  ...+.+.. |  +.++           +.+
T Consensus         8 I~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~a-----------~~~   72 (318)
T 1ez4_A            8 VVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYSD-----------CKD   72 (318)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGGG-----------GTT
T ss_pred             EEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHHH-----------hCC
Confidence            789998 9999999999998875  79999998776665555554321  12233332 2  3332           348


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      .|++|..+|..
T Consensus        73 aDvVii~ag~~   83 (318)
T 1ez4_A           73 ADLVVITAGAP   83 (318)
T ss_dssp             CSEEEECCCC-
T ss_pred             CCEEEECCCCC
Confidence            89999999873

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.47  E-value=0.0077  Score=46.79  Aligned_cols=76  Identities=16%  Similarity=0.200  Sum_probs=48.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||.|+ +++|...+..+...|+ +|+.+++++++.+ .++++   +   ..  ..|..+.+.+.+.+.++.. ..++|
T Consensus       188 ~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l---G---a~--~i~~~~~~~~~~~~~~~~~-g~g~D  256 (398)
T 2dph_A          188 HVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLK-LLSDA---G---FE--TIDLRNSAPLRDQIDQILG-KPEVD  256 (398)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHH-HHHTT---T---CE--EEETTSSSCHHHHHHHHHS-SSCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHH-HHHHc---C---Cc--EEcCCCcchHHHHHHHHhC-CCCCC
Confidence            4799996 9999998887777899 8999998866432 23322   2   22  2465554331332332221 12699


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.++|.
T Consensus       257 vvid~~g~  264 (398)
T 2dph_A          257 CGVDAVGF  264 (398)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCCC
Confidence            99999985

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.42  E-value=0.0082  Score=46.12  Aligned_cols=75  Identities=16%  Similarity=0.170  Sum_probs=47.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||+|+ +++|...+..+...|+ +|+.+++++++. +.++++   +.+ .   ..|..+. ++.+.+.++.  .+++|
T Consensus       193 ~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~-~~a~~l---Ga~-~---vi~~~~~-~~~~~~~~~~--~gg~D  260 (371)
T 1f8f_A          193 SFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRL-ELAKQL---GAT-H---VINSKTQ-DPVAAIKEIT--DGGVN  260 (371)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHHHH---TCS-E---EEETTTS-CHHHHHHHHT--TSCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHc---CCC-E---EecCCcc-CHHHHHHHhc--CCCCc
Confidence            4789995 8999999887777898 688888876543 333443   222 1   2344333 3333333222  23799


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.++|.
T Consensus       261 ~vid~~g~  268 (371)
T 1f8f_A          261 FALESTGS  268 (371)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999985

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.41  E-value=0.0098  Score=45.34  Aligned_cols=74  Identities=14%  Similarity=0.127  Sum_probs=47.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc-C-C
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF-G-K   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-g-~   77 (174)
                      ++||.|+ +++|...+..+...|+ +|+.+++++++. +.++++   +.+    ...|..+.+ +.+   ++.+.. + +
T Consensus       169 ~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~~l---Ga~----~vi~~~~~~-~~~---~v~~~t~g~g  235 (352)
T 3fpc_A          169 TVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCC-DIALEY---GAT----DIINYKNGD-IVE---QILKATDGKG  235 (352)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHH-HHHHHH---TCC----EEECGGGSC-HHH---HHHHHTTTCC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHh---CCc----eEEcCCCcC-HHH---HHHHHcCCCC
Confidence            5899985 8999998887777899 799998876543 344444   222    123433332 322   333322 2 6


Q ss_pred             ccEEEecccc
Q 035504           78 LDILVNNAAI   87 (174)
Q Consensus        78 id~li~~ag~   87 (174)
                      +|++|.++|.
T Consensus       236 ~D~v~d~~g~  245 (352)
T 3fpc_A          236 VDKVVIAGGD  245 (352)
T ss_dssp             EEEEEECSSC
T ss_pred             CCEEEECCCC
Confidence            9999999886

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.38  E-value=0.029  Score=40.76  Aligned_cols=77  Identities=14%  Similarity=0.196  Sum_probs=55.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      .+.|.|++|.+|+.+++.+.+. +++++.+....+...+..    ....+    +..|++.++.+.+.+..+.++  +++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~----~~~~D----vvIDfT~p~a~~~~~~~a~~~--g~~   71 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT----DGNTE----VVIDFTHPDVVMGNLEFLIDN--GIH   71 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH----HTTCC----EEEECSCTTTHHHHHHHHHHT--TCE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh----ccCCc----EEEEccChHHHHHHHHHHHHc--CCC
Confidence            3789999999999999999876 899886654433333222    11222    678999999988888766654  678


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      +|+-..|.
T Consensus        72 ~VigTTG~   79 (245)
T 1p9l_A           72 AVVGTTGF   79 (245)
T ss_dssp             EEECCCCC
T ss_pred             EEEcCCCC
Confidence            88888774

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.34  E-value=0.056  Score=40.94  Aligned_cols=72  Identities=11%  Similarity=0.088  Sum_probs=50.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcC--CCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSG--FDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|+|+ |.+|..++..|+..+.  ++++.+.+.+.++....++....  ..++.+.. |  +.++           +.+
T Consensus        12 I~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a-----------~~~   76 (326)
T 2zqz_A           12 VILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD-----------AKD   76 (326)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------GGG
T ss_pred             EEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH-----------hCC
Confidence            789998 9999999999998875  79999998776665555554321  12233332 2  3333           237


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      .|++|..+|..
T Consensus        77 aDvVii~ag~~   87 (326)
T 2zqz_A           77 ADLVVITAGAP   87 (326)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEEcCCCC
Confidence            89999999873

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.31  E-value=0.022  Score=42.45  Aligned_cols=83  Identities=10%  Similarity=0.028  Sum_probs=56.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHH-------HhhcCCCceeEEEeecCChhhHHHHHHHHHhh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK-------LKHSGFDSVIFHQLDVADPATIHSLADFVRSQ   74 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   74 (174)
                      +.|.|. |.+|..+++.|++.|++|++.+|+++..++..+.       +.+.. . ..++-.-+.+...++.+++++.+.
T Consensus        18 I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~-~-aDvvi~~vp~~~~~~~v~~~l~~~   94 (296)
T 3qha_A           18 LGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVA-A-ADLIHITVLDDAQVREVVGELAGH   94 (296)
T ss_dssp             EEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHT-T-SSEEEECCSSHHHHHHHHHHHHTT
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHH-h-CCEEEEECCChHHHHHHHHHHHHh
Confidence            567775 8999999999999999999999987765544321       11111 1 334444555667788888888776


Q ss_pred             cCCccEEEecccc
Q 035504           75 FGKLDILVNNAAI   87 (174)
Q Consensus        75 ~g~id~li~~ag~   87 (174)
                      ..+=.++|++...
T Consensus        95 l~~g~ivv~~st~  107 (296)
T 3qha_A           95 AKPGTVIAIHSTI  107 (296)
T ss_dssp             CCTTCEEEECSCC
T ss_pred             cCCCCEEEEeCCC
Confidence            6555677777654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.29  E-value=0.027  Score=43.59  Aligned_cols=79  Identities=15%  Similarity=0.172  Sum_probs=51.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeec-----------CChhhHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDV-----------ADPATIHSLAD   69 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----------~~~~~i~~~~~   69 (174)
                      +++|.|+ |.+|...++.+...|++|++.+++....++..+ +   +   ..++..|+           ..++....-..
T Consensus       186 kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l---G---a~~~~l~~~~~~~~gya~~~~~~~~~~~~~  257 (381)
T 3p2y_A          186 SALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V---G---AQWLDLGIDAAGEGGYARELSEAERAQQQQ  257 (381)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T---T---CEECCCC-------------CHHHHHHHHH
T ss_pred             EEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---C---CeEEeccccccccccchhhhhHHHHhhhHH
Confidence            4788988 799999999999999999999999775544432 3   1   22222211           01111223334


Q ss_pred             HHHhhcCCccEEEecccc
Q 035504           70 FVRSQFGKLDILVNNAAI   87 (174)
Q Consensus        70 ~~~~~~g~id~li~~ag~   87 (174)
                      .+.+.....|++|.++.+
T Consensus       258 ~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          258 ALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHTTCSEEEECCCC
T ss_pred             HHHHHHhcCCEEEECCCC
Confidence            555566789999988754

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.28  E-value=0.026  Score=44.08  Aligned_cols=37  Identities=19%  Similarity=0.151  Sum_probs=31.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE   38 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   38 (174)
                      +++|.|+ |.+|...++.+...|++|++.+++....+.
T Consensus       192 kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~  228 (405)
T 4dio_A          192 KIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQ  228 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHH
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence            4788988 799999999999999999999998765443

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.27  E-value=0.0035  Score=46.63  Aligned_cols=40  Identities=20%  Similarity=0.239  Sum_probs=33.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVE   41 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~   41 (174)
                      +++|.|+ ||.|++++..|.+.|+ +|.+++|+.+++++.++
T Consensus       124 ~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          124 ICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             EEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             EEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            3789997 6999999999999998 89999999876555543

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.25  E-value=0.083  Score=39.70  Aligned_cols=73  Identities=22%  Similarity=0.167  Sum_probs=50.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhcC--CCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSG--FDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++.|+|+ |.+|..++..|+..+  .++++.+.+.+.++..+.++....  ..++.+.. +  +.++           +.
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~~   66 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------LE   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------hC
Confidence            3789998 999999999999987  579999998766665555554321  11233332 2  3333           23


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      +.|++|..+|..
T Consensus        67 ~aD~Vii~ag~~   78 (310)
T 2xxj_A           67 GARAVVLAAGVA   78 (310)
T ss_dssp             TEEEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            789999999873

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.24  E-value=0.005  Score=46.47  Aligned_cols=36  Identities=31%  Similarity=0.402  Sum_probs=31.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG   36 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~   36 (174)
                      ++||+||++++|...+..+...|++|+.+++++++.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~  188 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA  188 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            589999999999999998888899999999886543

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.23  E-value=0.091  Score=39.42  Aligned_cols=73  Identities=19%  Similarity=0.071  Sum_probs=47.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|+|+ |.+|..++..|+..|. +|++.+++++.++....++...   ......+...  +|.++           +..
T Consensus         5 I~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~~~   70 (309)
T 1ur5_A            5 ISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD-----------TAN   70 (309)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG-----------GTT
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCHHH-----------HCC
Confidence            789998 9999999999999996 8999998876555444444331   1111222211  23222           227


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      .|++|.++|..
T Consensus        71 aD~Vi~a~g~p   81 (309)
T 1ur5_A           71 SDVIVVTSGAP   81 (309)
T ss_dssp             CSEEEECCCC-
T ss_pred             CCEEEEcCCCC
Confidence            89999999873

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.18  E-value=0.036  Score=41.77  Aligned_cols=72  Identities=22%  Similarity=0.214  Sum_probs=48.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcC--CCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSG--FDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|.|+ |.+|.+++..|++.|.  +|++.+++++.++....++....  .....+..   +|.+.           ...
T Consensus         3 I~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~~-----------~~~   67 (319)
T 1a5z_A            3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYAD-----------LKG   67 (319)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGGG-----------GTT
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHHH-----------hCC
Confidence            678998 9999999999999998  99999998766555444332210  01111111   23332           237


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      .|++|.+++..
T Consensus        68 aDvViiav~~~   78 (319)
T 1a5z_A           68 SDVVIVAAGVP   78 (319)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEEccCCC
Confidence            89999999763

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.18  E-value=0.003  Score=46.75  Aligned_cols=37  Identities=24%  Similarity=0.381  Sum_probs=31.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA   39 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   39 (174)
                      ++|.|+ |++|.++++.|.+.|++|.+.+|+.++.++.
T Consensus       132 v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l  168 (275)
T 2hk9_A          132 ILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKL  168 (275)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHH
T ss_pred             EEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence            678886 7999999999999999999999987655444

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.15  E-value=0.1  Score=39.32  Aligned_cols=72  Identities=21%  Similarity=0.218  Sum_probs=48.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhh---cCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKH---SGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|+|+ |.+|..++..|+.+|.  +|++.+.+++.++....++..   ..+..+.+..   .+.++           +.
T Consensus         9 I~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~---~~~~a-----------~~   73 (317)
T 3d0o_A            9 VVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA---GEYSD-----------CH   73 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE---CCGGG-----------GT
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe---CCHHH-----------hC
Confidence            689998 9999999999998884  799999887655543343332   1112233332   23333           23


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      +.|++|..+|..
T Consensus        74 ~aDvVvi~ag~~   85 (317)
T 3d0o_A           74 DADLVVICAGAA   85 (317)
T ss_dssp             TCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            799999999873

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.13  E-value=0.024  Score=41.88  Aligned_cols=83  Identities=12%  Similarity=0.060  Sum_probs=50.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc--CC----CceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS--GF----DSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--~~----~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      +.|.|++|.+|.++++.|.+.|++|++.+|+.+..++..+ ..-.  ..    ....++-.-+ ....+..+++++....
T Consensus        14 I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-~g~~~~~~~~~~~~aDvVi~av-~~~~~~~v~~~l~~~l   91 (286)
T 3c24_A           14 VAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-MGIPLTDGDGWIDEADVVVLAL-PDNIIEKVAEDIVPRV   91 (286)
T ss_dssp             EEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-TTCCCCCSSGGGGTCSEEEECS-CHHHHHHHHHHHGGGS
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-cCCCcCCHHHHhcCCCEEEEcC-CchHHHHHHHHHHHhC
Confidence            6789999999999999999999999999998765544332 1100  00    0111222222 2234677777776554


Q ss_pred             CCccEEEeccc
Q 035504           76 GKLDILVNNAA   86 (174)
Q Consensus        76 g~id~li~~ag   86 (174)
                      .+=.++|+++.
T Consensus        92 ~~~~ivv~~s~  102 (286)
T 3c24_A           92 RPGTIVLILDA  102 (286)
T ss_dssp             CTTCEEEESCS
T ss_pred             CCCCEEEECCC
Confidence            43336665544

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.08  E-value=0.16  Score=38.55  Aligned_cols=72  Identities=18%  Similarity=0.022  Sum_probs=47.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhh----cC-CCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKH----SG-FDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~----~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      +.|.|| |.+|.+++..|++.|+ +|++.+++++.++.....+..    .. ..++...    +|   .++.++      
T Consensus        12 I~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d---~~ea~~------   77 (331)
T 1pzg_A           12 VAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YS---YEAALT------   77 (331)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CS---HHHHHT------
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CC---HHHHhC------
Confidence            678998 9999999999999998 999999987655543333321    11 1112211    22   222232      


Q ss_pred             CCccEEEeccccc
Q 035504           76 GKLDILVNNAAIF   88 (174)
Q Consensus        76 g~id~li~~ag~~   88 (174)
                       ..|++|..+|..
T Consensus        78 -~aDiVi~a~g~p   89 (331)
T 1pzg_A           78 -GADCVIVTAGLT   89 (331)
T ss_dssp             -TCSEEEECCSCS
T ss_pred             -CCCEEEEccCCC
Confidence             789999999863

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.06  E-value=0.099  Score=39.24  Aligned_cols=74  Identities=20%  Similarity=0.155  Sum_probs=49.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++.|+|+ |.+|..++..++..|. +|++.+++.+.++....++...   ......+...  +|.++           +.
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~~   66 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYED-----------MR   66 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGGG-----------GT
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHHH-----------hC
Confidence            4789998 9999999999998887 6999999876665444444331   1112223221  23222           23


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      ..|++|..+|..
T Consensus        67 ~aD~Vi~~ag~~   78 (308)
T 2d4a_B           67 GSDIVLVTAGIG   78 (308)
T ss_dssp             TCSEEEECCSCC
T ss_pred             CCCEEEEeCCCC
Confidence            789999999873

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.06  E-value=0.01  Score=44.65  Aligned_cols=41  Identities=32%  Similarity=0.383  Sum_probs=33.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL   43 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   43 (174)
                      +||+||++++|...+..+...|++|+.+++++++. +.++++
T Consensus       150 VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~-~~~~~l  190 (324)
T 3nx4_A          150 VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTH-GYLKSL  190 (324)
T ss_dssp             EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH-HHHHHH
T ss_pred             EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhc
Confidence            79999999999999998888999999999886654 333444

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.06  E-value=0.12  Score=38.66  Aligned_cols=38  Identities=26%  Similarity=0.177  Sum_probs=31.8

Q ss_pred             EEEecCCCchhHHHHHHHHHC--CCeEEEEeeChhHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASN--GIIVVLTARDEKRGLEAV   40 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~   40 (174)
                      +.|.|+ |.+|..++..|++.  |.+|++.+++++.++...
T Consensus         3 I~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~   42 (310)
T 1guz_A            3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKA   42 (310)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHH
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHH
Confidence            678998 99999999999985  789999999876555443

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.05  E-value=0.073  Score=39.30  Aligned_cols=83  Identities=16%  Similarity=0.102  Sum_probs=55.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC---eEEEEeeChhHHHHHHHHHhh---------cCCCceeEEEeecCChhhHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI---IVVLTARDEKRGLEAVEKLKH---------SGFDSVIFHQLDVADPATIHSLA   68 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~l~~---------~~~~~~~~~~~Dv~~~~~i~~~~   68 (174)
                      ++.|.|+ |.+|.++++.|.+.|+   +|++.+|+++..++..+++.-         ....++.++.+   ..+.+..++
T Consensus         5 ~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~vl   80 (280)
T 3tri_A            5 NITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKMVC   80 (280)
T ss_dssp             CEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHHHH
T ss_pred             EEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHHHH
Confidence            3667777 8999999999999998   899999998776655543210         01112333333   456788888


Q ss_pred             HHHHhh-cCCccEEEecccc
Q 035504           69 DFVRSQ-FGKLDILVNNAAI   87 (174)
Q Consensus        69 ~~~~~~-~g~id~li~~ag~   87 (174)
                      +++... ..+=.++|++++.
T Consensus        81 ~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           81 EELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHhhccCCCeEEEEecCC
Confidence            888766 5433377876543

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.03  E-value=0.038  Score=43.56  Aligned_cols=30  Identities=30%  Similarity=0.498  Sum_probs=25.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEee
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTAR   31 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r   31 (174)
                      .++|.|+ ||+|.++++.|++.|. ++.+++.
T Consensus        42 ~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~   72 (434)
T 1tt5_B           42 KVLVIGA-GGLGCELLKNLALSGFRQIHVIDM   72 (434)
T ss_dssp             CEEEECS-STHHHHHHHHHHHTTCCCEEEEEC
T ss_pred             EEEEECc-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4788887 8999999999999996 6888854

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.02  E-value=0.0077  Score=45.64  Aligned_cols=69  Identities=16%  Similarity=0.210  Sum_probs=48.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|+ +.+|..+++.|.++|. |++++++++..+  .++      .+..++..|.+|++.++++      ...+.|.+
T Consensus       118 viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~~------~~~~~i~gd~~~~~~L~~a------~i~~a~~v  181 (336)
T 1lnq_A          118 VVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK--VLR------SGANFVHGDPTRVSDLEKA------NVRGARAV  181 (336)
T ss_dssp             EEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH--HHH------TTCEEEESCTTSHHHHHHT------CSTTEEEE
T ss_pred             EEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh--HHh------CCcEEEEeCCCCHHHHHhc------ChhhccEE
Confidence            678886 8999999999999999 999988876544  221      2367788888887766543      11245666


Q ss_pred             Eeccc
Q 035504           82 VNNAA   86 (174)
Q Consensus        82 i~~ag   86 (174)
                      |...+
T Consensus       182 i~~~~  186 (336)
T 1lnq_A          182 IVDLE  186 (336)
T ss_dssp             EECCS
T ss_pred             EEcCC
Confidence            65543

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=95.96  E-value=0.015  Score=44.99  Aligned_cols=37  Identities=16%  Similarity=0.175  Sum_probs=31.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE   38 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   38 (174)
                      +++|.|+ |++|+..++.+...|++|++++++....+.
T Consensus       174 ~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~  210 (384)
T 1l7d_A          174 RVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQ  210 (384)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4789996 899999999999999999999988665443

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.94  E-value=0.056  Score=40.25  Aligned_cols=34  Identities=21%  Similarity=0.288  Sum_probs=30.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK   34 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~   34 (174)
                      ++.|.||.|.+|.++++.|.+.|++|.+++|+.+
T Consensus        23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           23 KIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            4788998899999999999999999999988754

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.94  E-value=0.039  Score=41.85  Aligned_cols=75  Identities=16%  Similarity=0.160  Sum_probs=45.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ +++|...+..+... |++|+.+++++++. +.++++   +.+.+    .|..+  +..+.+.++.. ..++|
T Consensus       174 ~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~-~~~~~l---Ga~~~----i~~~~--~~~~~v~~~t~-g~g~d  241 (345)
T 3jv7_A          174 TAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRL-ALAREV---GADAA----VKSGA--GAADAIRELTG-GQGAT  241 (345)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHH-HHHHHT---TCSEE----EECST--THHHHHHHHHG-GGCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHc---CCCEE----EcCCC--cHHHHHHHHhC-CCCCe
Confidence            4789998 99999988766666 78999999886543 333333   32211    23222  33332322221 12799


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.++|.
T Consensus       242 ~v~d~~G~  249 (345)
T 3jv7_A          242 AVFDFVGA  249 (345)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999985

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.89  E-value=0.23  Score=37.56  Aligned_cols=70  Identities=17%  Similarity=0.148  Sum_probs=47.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhh----cC-CCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKH----SG-FDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~----~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      +.|.|| |.+|..++..|+..|. +|++.+++++.++.....+..    .. ..++...    +|.+.           +
T Consensus        17 I~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d~~a-----------l   80 (328)
T 2hjr_A           17 ISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE----NNYEY-----------L   80 (328)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE----SCGGG-----------G
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC----CCHHH-----------H
Confidence            678998 9999999999999998 999999987665543322221    11 1122221    22222           2


Q ss_pred             CCccEEEecccc
Q 035504           76 GKLDILVNNAAI   87 (174)
Q Consensus        76 g~id~li~~ag~   87 (174)
                      ...|++|.++|.
T Consensus        81 ~~aD~VI~avg~   92 (328)
T 2hjr_A           81 QNSDVVIITAGV   92 (328)
T ss_dssp             TTCSEEEECCSC
T ss_pred             CCCCEEEEcCCC
Confidence            378999999986

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.85  E-value=0.037  Score=40.91  Aligned_cols=84  Identities=18%  Similarity=0.128  Sum_probs=53.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHH-------HhhcCCCceeEEEeecCChhhHHHHH---HHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK-------LKHSGFDSVIFHQLDVADPATIHSLA---DFV   71 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~Dv~~~~~i~~~~---~~~   71 (174)
                      +.|.|+ |.+|..+++.|++.|++|++.+|+++..++..+.       +.+.- ....++-.-+.+...++.++   +++
T Consensus         4 i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~-~~aDvvi~~vp~~~~~~~v~~~~~~l   81 (287)
T 3pef_A            4 FGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVV-ESCPVTFAMLADPAAAEEVCFGKHGV   81 (287)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHH-HHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHH-hcCCEEEEEcCCHHHHHHHHcCcchH
Confidence            567775 8999999999999999999999987765554321       00000 01233444455556677776   666


Q ss_pred             HhhcCCccEEEecccc
Q 035504           72 RSQFGKLDILVNNAAI   87 (174)
Q Consensus        72 ~~~~g~id~li~~ag~   87 (174)
                      .+...+=.++|++.+.
T Consensus        82 ~~~l~~~~~vi~~st~   97 (287)
T 3pef_A           82 LEGIGEGRGYVDMSTV   97 (287)
T ss_dssp             HHHCCTTCEEEECSCC
T ss_pred             hhcCCCCCEEEeCCCC
Confidence            6555444567776543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.84  E-value=0.039  Score=41.13  Aligned_cols=35  Identities=26%  Similarity=0.243  Sum_probs=30.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG   36 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~   36 (174)
                      +++|.|+ |+||+++++.|...|++|++.+|+.+..
T Consensus       159 ~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~  193 (300)
T 2rir_A          159 QVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHL  193 (300)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             EEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            4788886 8999999999999999999999987543

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.80  E-value=0.015  Score=43.60  Aligned_cols=65  Identities=14%  Similarity=0.184  Sum_probs=41.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||.|+ +++|...+..+...|++|+.++ ++++. +.++++   +.+  .++  |  |.+.+          .+++|+
T Consensus       145 ~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~-~~~~~l---Ga~--~v~--~--d~~~v----------~~g~Dv  202 (315)
T 3goh_A          145 EVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQ-ALAAKR---GVR--HLY--R--EPSQV----------TQKYFA  202 (315)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCH-HHHHHH---TEE--EEE--S--SGGGC----------CSCEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhH-HHHHHc---CCC--EEE--c--CHHHh----------CCCccE
Confidence            4899999 9999999888878899999998 65443 334444   211  112  2  22221          457999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|.++|.
T Consensus       203 v~d~~g~  209 (315)
T 3goh_A          203 IFDAVNS  209 (315)
T ss_dssp             EECC---
T ss_pred             EEECCCc
Confidence            9998885

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.78  E-value=0.09  Score=38.20  Aligned_cols=74  Identities=20%  Similarity=0.172  Sum_probs=49.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhh-----------------cCCCceeEEEeecCChhhH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKH-----------------SGFDSVIFHQLDVADPATI   64 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~~Dv~~~~~i   64 (174)
                      +|..|++.|.   .+..|+++|++|+.++.++...+...+....                 ....++.++.+|+.+... 
T Consensus        72 vLD~GCG~G~---~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~-  147 (252)
T 2gb4_A           72 VFFPLCGKAI---EMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR-  147 (252)
T ss_dssp             EEETTCTTCT---HHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG-
T ss_pred             EEEeCCCCcH---HHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc-
Confidence            6777887664   3456888899999999997655444333321                 112468999999877542 


Q ss_pred             HHHHHHHHhhcCCccEEEecccc
Q 035504           65 HSLADFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus        65 ~~~~~~~~~~~g~id~li~~ag~   87 (174)
                              ...+.+|+++.+...
T Consensus       148 --------~~~~~FD~V~~~~~l  162 (252)
T 2gb4_A          148 --------ANIGKFDRIWDRGAL  162 (252)
T ss_dssp             --------GCCCCEEEEEESSST
T ss_pred             --------ccCCCEEEEEEhhhh
Confidence                    112589999977644

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.78  E-value=0.02  Score=42.25  Aligned_cols=42  Identities=21%  Similarity=0.321  Sum_probs=35.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKL   43 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l   43 (174)
                      +++|.|+ ||.|++++..|.+.|+ +|.++.|+.+++++.++++
T Consensus       121 ~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          121 KVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             CEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            3788886 8999999999999997 7999999988777776665

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.77  E-value=0.08  Score=38.48  Aligned_cols=86  Identities=15%  Similarity=0.152  Sum_probs=53.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeChhHHHHHHHHHhh-------cCCCceeEEEeecCChhhHHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDEKRGLEAVEKLKH-------SGFDSVIFHQLDVADPATIHSLADFVR   72 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~~Dv~~~~~i~~~~~~~~   72 (174)
                      ++.|.|+ |.+|..+++.|.+.|++ |.+.+|+.+..++..+.+.-       .......++-.-+ ....+.++++++.
T Consensus        12 ~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av-~~~~~~~v~~~l~   89 (266)
T 3d1l_A           12 PIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSL-KDSAFAELLQGIV   89 (266)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECC-CHHHHHHHHHHHH
T ss_pred             eEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEec-CHHHHHHHHHHHH
Confidence            3678887 89999999999999998 78888887766555443210       0001122222222 2335677777776


Q ss_pred             hhcCCccEEEeccccc
Q 035504           73 SQFGKLDILVNNAAIF   88 (174)
Q Consensus        73 ~~~g~id~li~~ag~~   88 (174)
                      ....+=.++|++++..
T Consensus        90 ~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           90 EGKREEALMVHTAGSI  105 (266)
T ss_dssp             TTCCTTCEEEECCTTS
T ss_pred             hhcCCCcEEEECCCCC
Confidence            6554334777777643

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.76  E-value=0.036  Score=45.78  Aligned_cols=30  Identities=37%  Similarity=0.568  Sum_probs=26.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      ++|.|+ ||+|.++++.|++.|. ++.+++.+
T Consensus        20 VlVVGa-GGLGsevak~La~aGVG~ItlvD~D   50 (640)
T 1y8q_B           20 VLVVGA-GGIGCELLKNLVLTGFSHIDLIDLD   50 (640)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence            688887 9999999999999996 68888764

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=95.76  E-value=0.25  Score=37.03  Aligned_cols=36  Identities=22%  Similarity=0.157  Sum_probs=31.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLE   38 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~   38 (174)
                      +.|.|+ |.+|..++..|++.|. +|++.+++++..+.
T Consensus         7 I~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~   43 (317)
T 2ewd_A            7 IAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQG   43 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHH
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHH
Confidence            678898 9999999999999998 99999998765554

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=95.75  E-value=0.17  Score=39.04  Aligned_cols=77  Identities=18%  Similarity=0.116  Sum_probs=45.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--e---EEEEeeChhH----HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--I---VVLTARDEKR----GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~---v~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      ++.|+||+|.||.+++..|+..+.  +   +++...+.+.    ++-.+.+|+.....-..  ...+.+  .-       
T Consensus        34 KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~--~v~i~~--~~-------  102 (375)
T 7mdh_A           34 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLR--EVSIGI--DP-------  102 (375)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEE--EEEEES--CH-------
T ss_pred             EEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcC--CcEEec--CC-------
Confidence            378999999999999999998763  2   7766554332    33334445432211111  122222  11       


Q ss_pred             HhhcCCccEEEeccccc
Q 035504           72 RSQFGKLDILVNNAAIF   88 (174)
Q Consensus        72 ~~~~g~id~li~~ag~~   88 (174)
                      .+.+...|++|..+|..
T Consensus       103 y~~~~daDvVVitag~p  119 (375)
T 7mdh_A          103 YEVFEDVDWALLIGAKP  119 (375)
T ss_dssp             HHHTTTCSEEEECCCCC
T ss_pred             HHHhCCCCEEEEcCCCC
Confidence            22344899999999873

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.66  E-value=0.024  Score=41.47  Aligned_cols=65  Identities=25%  Similarity=0.271  Sum_probs=46.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.|+ |++|+++++.|.+.|++|.+.+|+.++.++..+++.      ..     ..+.++   +        ...|+
T Consensus       118 ~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~------~~-----~~~~~~---~--------~~~Di  174 (263)
T 2d5c_A          118 PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG------LR-----AVPLEK---A--------REARL  174 (263)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT------CE-----ECCGGG---G--------GGCSE
T ss_pred             eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cc-----hhhHhh---c--------cCCCE
Confidence            4788997 779999999999999999999998776666555442      11     112221   1        26899


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      +|++....
T Consensus       175 vi~~tp~~  182 (263)
T 2d5c_A          175 LVNATRVG  182 (263)
T ss_dssp             EEECSSTT
T ss_pred             EEEccCCC
Confidence            99998764

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.66  E-value=0.063  Score=40.60  Aligned_cols=76  Identities=12%  Similarity=0.237  Sum_probs=45.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeE-EEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIV-VLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v-~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ +++|...+..+...|+++ +.+++++++ .+.++++   +.+ .   ..|..+. +..+...++. .....|
T Consensus       163 ~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k-~~~a~~l---Ga~-~---~i~~~~~-~~~~~~~~~~-~~~g~d  231 (346)
T 4a2c_A          163 NVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEK-LALAKSF---GAM-Q---TFNSSEM-SAPQMQSVLR-ELRFNQ  231 (346)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHH-HHHHHHT---TCS-E---EEETTTS-CHHHHHHHHG-GGCSSE
T ss_pred             EEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHH-HHHHHHc---CCe-E---EEeCCCC-CHHHHHHhhc-ccCCcc
Confidence            4788887 899999998888889875 566666543 3344444   222 1   2343332 3333333332 334678


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      .++.++|.
T Consensus       232 ~v~d~~G~  239 (346)
T 4a2c_A          232 LILETAGV  239 (346)
T ss_dssp             EEEECSCS
T ss_pred             cccccccc
Confidence            88888773

>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}

Probab=95.60  E-value=0.21  Score=31.29  Aligned_cols=73  Identities=23%  Similarity=0.329  Sum_probs=53.4

Q ss_pred             CCchhHHHHHHHHHCCCeEEEEeeChhH--HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEecc
Q 035504            8 NKGIGYETVRQLASNGIIVVLTARDEKR--GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNA   85 (174)
Q Consensus         8 ~~giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~a   85 (174)
                      .--|=..+++..-++|.+|++.+.+.++  -.+-++++..++-   .+.  -+.|.++...-+.+++++++.+|+++...
T Consensus        11 dpeilkeivreikrqgvrvvllysdqdekrrrerleefekqgv---dvr--tvedkedfrenireiwerypqldvvvivt   85 (162)
T 2l82_A           11 DPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGV---DVR--TVEDKEDFRENIREIWERYPQLDVVVIVT   85 (162)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEECCSCHHHHHHHHHHHHTTTC---EEE--ECCSHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred             CHHHHHHHHHHHHhCCeEEEEEecCchHHHHHHHHHHHHHcCC---cee--eeccHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence            3456778999999999999999876543  3344556665552   222  34588889999999999999999887655

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.54  E-value=0.063  Score=39.89  Aligned_cols=35  Identities=26%  Similarity=0.313  Sum_probs=30.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG   36 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~   36 (174)
                      +++|.|+ |+||+++++.+...|++|++.+|+.+..
T Consensus       157 ~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~  191 (293)
T 3d4o_A          157 NVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLL  191 (293)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             EEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            4788885 8999999999999999999999987543

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.50  E-value=0.21  Score=37.56  Aligned_cols=72  Identities=25%  Similarity=0.291  Sum_probs=48.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCC---CceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGF---DSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|+|+ |.+|..++..|+..|.  +|++.+++++.++....++.....   ....+..   .+.++           +.
T Consensus         9 I~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~---~~~~a-----------l~   73 (316)
T 1ldn_A            9 VVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH---GDYDD-----------CR   73 (316)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE---CCGGG-----------TT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc---CcHHH-----------hC
Confidence            689998 9999999999998774  799999987644433444443211   1233332   22222           23


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      +.|++|.++|..
T Consensus        74 ~aDvViia~~~~   85 (316)
T 1ldn_A           74 DADLVVICAGAN   85 (316)
T ss_dssp             TCSEEEECCSCC
T ss_pred             CCCEEEEcCCCC
Confidence            789999999874

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.48  E-value=0.16  Score=35.30  Aligned_cols=74  Identities=15%  Similarity=0.065  Sum_probs=47.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc------------CCCceeEEEeecCChhhHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS------------GFDSVIFHQLDVADPATIHSLAD   69 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dv~~~~~i~~~~~   69 (174)
                      +|-.|++.|.-   +..|+++|++|+.++.++...+...+.....            ...++.++.+|+.+...-.    
T Consensus        26 vLD~GCG~G~~---~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~----   98 (203)
T 1pjz_A           26 VLVPLCGKSQD---MSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD----   98 (203)
T ss_dssp             EEETTTCCSHH---HHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH----
T ss_pred             EEEeCCCCcHh---HHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc----
Confidence            56777766632   3456667999999999976555444433210            1246899999998765211    


Q ss_pred             HHHhhcCCccEEEecccc
Q 035504           70 FVRSQFGKLDILVNNAAI   87 (174)
Q Consensus        70 ~~~~~~g~id~li~~ag~   87 (174)
                           .+.+|.++.+...
T Consensus        99 -----~~~fD~v~~~~~l  111 (203)
T 1pjz_A           99 -----IGHCAAFYDRAAM  111 (203)
T ss_dssp             -----HHSEEEEEEESCG
T ss_pred             -----CCCEEEEEECcch
Confidence                 1378999876543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.48  E-value=0.055  Score=40.71  Aligned_cols=84  Identities=13%  Similarity=0.148  Sum_probs=52.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHH-------HhhcCCCceeEEEeecCChhhHHHHHH--HHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK-------LKHSGFDSVIFHQLDVADPATIHSLAD--FVR   72 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~Dv~~~~~i~~~~~--~~~   72 (174)
                      +.|.|+ |.+|..+++.|++.|++|++.+|+++..++..+.       +.+.- ....++-.-+.+...++.++.  ++.
T Consensus        34 I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~-~~aDvVi~~vp~~~~~~~v~~~~~~~  111 (320)
T 4dll_A           34 ITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAA-RDADIVVSMLENGAVVQDVLFAQGVA  111 (320)
T ss_dssp             EEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHH-TTCSEEEECCSSHHHHHHHHTTTCHH
T ss_pred             EEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHH-hcCCEEEEECCCHHHHHHHHcchhHH
Confidence            556665 8999999999999999999999997765544321       00000 112334444455566666665  555


Q ss_pred             hhcCCccEEEecccc
Q 035504           73 SQFGKLDILVNNAAI   87 (174)
Q Consensus        73 ~~~g~id~li~~ag~   87 (174)
                      +...+=.++|++...
T Consensus       112 ~~l~~~~~vi~~st~  126 (320)
T 4dll_A          112 AAMKPGSLFLDMASI  126 (320)
T ss_dssp             HHCCTTCEEEECSCC
T ss_pred             hhCCCCCEEEecCCC
Confidence            555444566666543

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.42  E-value=0.19  Score=37.26  Aligned_cols=36  Identities=25%  Similarity=0.243  Sum_probs=31.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE   38 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   38 (174)
                      +.|.|+ |.+|..+|..|++.|++|++.+++++..++
T Consensus        18 I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~   53 (302)
T 1f0y_A           18 VTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAK   53 (302)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence            667887 899999999999999999999998776554

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.40  E-value=0.03  Score=39.64  Aligned_cols=36  Identities=22%  Similarity=0.321  Sum_probs=30.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL   37 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   37 (174)
                      ++.|.| .|.+|.++++.|.+.|++|++.+|+.+..+
T Consensus        30 ~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~   65 (215)
T 2vns_A           30 KVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTA   65 (215)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHH
T ss_pred             EEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            367888 699999999999999999999999866543

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.36  E-value=0.19  Score=37.16  Aligned_cols=38  Identities=18%  Similarity=0.066  Sum_probs=32.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV   40 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   40 (174)
                      +.|.|+ |.+|..++..|++.|++|.+.+|+++..+...
T Consensus         6 i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~   43 (316)
T 2ew2_A            6 IAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIR   43 (316)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence            678886 99999999999999999999999876555443

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.36  E-value=0.15  Score=37.26  Aligned_cols=37  Identities=22%  Similarity=0.178  Sum_probs=31.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA   39 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   39 (174)
                      +.|.| .|.+|.++++.|.+.|++|++.+|+++..+..
T Consensus         3 i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~   39 (279)
T 2f1k_A            3 IGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKA   39 (279)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            67888 59999999999999999999999987655443

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=95.32  E-value=0.053  Score=51.52  Aligned_cols=78  Identities=14%  Similarity=0.187  Sum_probs=48.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc--CCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF--GKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~--g~i   78 (174)
                      ++||.||+||+|.+.+......|++|+.+.++.++.+...+.+...+.+.+    .|..+.+-    .+++.+..  .++
T Consensus      1670 ~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v----~~~~~~~~----~~~i~~~t~g~Gv 1741 (2512)
T 2vz8_A         1670 SVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCF----ANSRDTSF----EQHVLRHTAGKGV 1741 (2512)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTE----EESSSSHH----HHHHHHTTTSCCE
T ss_pred             EEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEE----ecCCCHHH----HHHHHHhcCCCCc
Confidence            489999999999999988878899999998876554333332211222211    23333322    23333322  369


Q ss_pred             cEEEeccc
Q 035504           79 DILVNNAA   86 (174)
Q Consensus        79 d~li~~ag   86 (174)
                      |+++++.|
T Consensus      1742 DvVld~~g 1749 (2512)
T 2vz8_A         1742 DLVLNSLA 1749 (2512)
T ss_dssp             EEEEECCC
T ss_pred             eEEEECCC
Confidence            99999876

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.32  E-value=0.054  Score=39.98  Aligned_cols=84  Identities=15%  Similarity=0.066  Sum_probs=49.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC------CceeEEEeecCChhhHHHHH---HHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF------DSVIFHQLDVADPATIHSLA---DFVR   72 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dv~~~~~i~~~~---~~~~   72 (174)
                      +.|.| .|.+|..+++.|++.|++|++.+|+++..++..+.=.....      ....++-.-+.+...++.++   +++.
T Consensus         4 I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~   82 (287)
T 3pdu_A            4 YGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGVL   82 (287)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGG
T ss_pred             EEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhh
Confidence            56776 58999999999999999999999997765554332000000      01223333444445566555   4444


Q ss_pred             hhcCCccEEEeccc
Q 035504           73 SQFGKLDILVNNAA   86 (174)
Q Consensus        73 ~~~g~id~li~~ag   86 (174)
                      +...+=.++|++..
T Consensus        83 ~~l~~g~~vv~~st   96 (287)
T 3pdu_A           83 EGIGGGRGYIDMST   96 (287)
T ss_dssp             GTCCTTCEEEECSC
T ss_pred             hcccCCCEEEECCC
Confidence            44433345665554

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.31  E-value=0.053  Score=40.60  Aligned_cols=84  Identities=19%  Similarity=0.122  Sum_probs=49.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc-CC------CceeEEEeecCChhhHHHHH---HHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS-GF------DSVIFHQLDVADPATIHSLA---DFV   71 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~------~~~~~~~~Dv~~~~~i~~~~---~~~   71 (174)
                      +.|.|+ |.+|..+++.|++.|++|++.+|+++..++..+. ... ..      ....++-.-+.+...++.++   +++
T Consensus        24 I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~-g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l  101 (310)
T 3doj_A           24 VGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH-GASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGV  101 (310)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-TCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred             EEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhh
Confidence            566765 8999999999999999999999987765554321 000 00      01223333444555566555   444


Q ss_pred             HhhcCCccEEEecccc
Q 035504           72 RSQFGKLDILVNNAAI   87 (174)
Q Consensus        72 ~~~~g~id~li~~ag~   87 (174)
                      .....+=.++|++...
T Consensus       102 ~~~l~~g~~vv~~st~  117 (310)
T 3doj_A          102 LEQICEGKGYIDMSTV  117 (310)
T ss_dssp             GGGCCTTCEEEECSCC
T ss_pred             hhccCCCCEEEECCCC
Confidence            4444333466665543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	174
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	3e-30
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	4e-27
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-26
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	8e-26
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-25
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-25
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	5e-25
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	5e-25
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-24
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	4e-24
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-23
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-23
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-23
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-23
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	3e-23
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	5e-23
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	7e-23
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	7e-23
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	1e-22
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-22
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-22
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	3e-22
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-22
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-22
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	7e-22
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-21
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-20
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-20
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-20
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	3e-20
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	7e-20
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	9e-20
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-19
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-19
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-19
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-19
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	5e-19
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	5e-19
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	7e-19
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	8e-19
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-19
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-18
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	4e-18
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	4e-18
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	5e-18
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-17
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	5e-16
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-16
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-15
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	4e-15
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-14
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-14
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-13
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-13
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	7e-13
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-12
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-11
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	4e-11
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	6e-11
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-10
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-10
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	4e-10
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	6e-10
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-07
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	2e-07
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-06
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	8e-05
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-04
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	4e-04
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	4e-04
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	4e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	0.001
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	0.001
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.002

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (272), Expect = 3e-30
 Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 22/172 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLDVAD 60
           A+VTGA+ GIG    R L   G+ VV  AR      E   + K +G+  ++I ++ D+++
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 72

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              I S+   +RSQ   +DI +NNA +                    + + +++ +    
Sbjct: 73  EEDILSMFSAIRSQHSGVDICINNAGLA-------------------RPDTLLSGSTSGW 113

Query: 121 EKCLRTNYYGSKRMCEVLIPLL--QLSDLPRIVNVSSNMGKLKNTWQGAICY 170
           +     N              +  +  D   I+N++S  G           Y
Sbjct: 114 KDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFY 165

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (251), Expect = 4e-27
 Identities = 65/173 (37%), Positives = 88/173 (50%), Gaps = 23/173 (13%)

Query: 2   AVVTGANKGIGYETVRQLAS-NGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD 60
           A+VTG NKGIG   VR L       VVLTARD  RG  AV++L+  G  S  FHQLD+ D
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDD 64

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
             +I +L DF+R ++G LD+LVNNA I                          TP +  A
Sbjct: 65  LQSIRALRDFLRKEYGGLDVLVNNAGIAF-------------------KVADPTPFHIQA 105

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICYLTF 173
           E  ++TN++G++ +C  L+PL++     R+VNVSS M               F
Sbjct: 106 EVTMKTNFFGTRDVCTELLPLIKPQG--RVVNVSSIMSVRALKSCSPELQQKF 156

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 98.6 bits (245), Expect = 2e-26
 Identities = 29/87 (33%), Positives = 49/87 (56%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTG ++G+G+   + LA  G  VV+ +R+ +   EA +KL        +  + DV++ 
Sbjct: 8  ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY 67

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIF 88
            +  L + V+ +FGKLD +VN A I 
Sbjct: 68 EEVKKLLEAVKEKFGKLDTVVNAAGIN 94

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 96.8 bits (241), Expect = 8e-26
 Identities = 36/168 (21%), Positives = 55/168 (32%), Gaps = 26/168 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG  +GIG    +  A  G +V L     + G E  E +         F Q+D+ D 
Sbjct: 8   VLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIG------GAFFQVDLEDE 60

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                  +      G++D+LVNNAAI                         +T       
Sbjct: 61  RERVRFVEEAAYALGRVDVLVNNAAIAA-------------------PGSALTVRLPEWR 101

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
           + L  N      +  +    ++      IVNV+S  G        A  
Sbjct: 102 RVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYN 149

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 96.9 bits (241), Expect = 1e-25
 Identities = 38/170 (22%), Positives = 56/170 (32%), Gaps = 17/170 (10%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS--VIFHQLDVA 59
           A++TG++ GIG  T    A  G  V +T R  +R  E  +++  +G     V     DV 
Sbjct: 8   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 67

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
             A    +      +FGKLDILVNNA                K G               
Sbjct: 68  TDAGQDEILSTTLGKFGKLDILVNNAGAAIP-------DSQSKTGTAQSIESY------- 113

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
            +  L  N      + +  +P L  +    +   S   G           
Sbjct: 114 -DATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYS 162

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.8 bits (238), Expect = 2e-25
 Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 20/168 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TGA  GIG  T  + A     +VL   ++    E   K K  G   V    +D ++ 
Sbjct: 10  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK-VHTFVVDCSNR 68

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I+S A  V+++ G + ILVNNA +                      +++        E
Sbjct: 69  EDIYSSAKKVKAEIGDVSILVNNAGVVY-------------------TSDLFATQDPQIE 109

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
           K    N        +  +P +  ++   IV V+S  G +   +  A C
Sbjct: 110 KTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYC 157

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 94.9 bits (236), Expect = 5e-25
 Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 22/168 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AV+TG   GIG     + A  G  + +         EA   +++ G   V+  + DV+ P
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLG-RRVLTVKCDVSQP 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +    V S FG+ DILVNNA I+                           T+E  +
Sbjct: 65  GDVEAFGKQVISTFGRCDILVNNAGIY-------------------PLIPFDELTFEQWK 105

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
           K    N      M +  +P ++ +   RI+N++S    LK        
Sbjct: 106 KTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYI 153

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 95.1 bits (236), Expect = 5e-25
 Identities = 43/169 (25%), Positives = 64/169 (37%), Gaps = 21/169 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG  KGIG+  V + A  G ++   AR+E    E + K +  GF  V     D +  
Sbjct: 11  VLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ-VTGSVCDASLR 69

Query: 62  ATIHSLADFVRSQF-GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
                L   V S F GKLDIL+NN                            +  T E  
Sbjct: 70  PEREKLMQTVSSMFGGKLDILINNLGAIR-------------------SKPTLDYTAEDF 110

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
              + TN   +  + ++  PLL+ S    I+ +SS  G +  +      
Sbjct: 111 SFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYS 159

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 93.9 bits (233), Expect = 2e-24
 Identities = 38/169 (22%), Positives = 63/169 (37%), Gaps = 23/169 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TG  +G+G E  RQ  + G  VVL    ++ G     +L     D+  +  LDV   
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG----DAARYQHLDVTIE 63

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                +  + R +FG +D LVNN             +G          +       E   
Sbjct: 64  EDWQRVVAYAREEFGSVDGLVNN-------------AGISTGMFLETESV------ERFR 104

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
           K +  N  G     + +IP ++ +    IVN+SS  G +      +   
Sbjct: 105 KVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGA 153

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 92.8 bits (230), Expect = 4e-24
 Identities = 40/170 (23%), Positives = 57/170 (33%), Gaps = 17/170 (10%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS--VIFHQLDVA 59
            ++TG++ GIG  T    A  G  V +T R  +R  E  + +  SG     V     DV 
Sbjct: 8   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 67

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
                  + +    QFGK+D+LVNNA         DA      D     +          
Sbjct: 68  TEDGQDQIINSTLKQFGKIDVLVNNAGAAI----PDAFGTTGTDQGIDIY---------- 113

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
             K L+ N      M + + P L  S    +   S   G           
Sbjct: 114 -HKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYA 162

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 91.2 bits (226), Expect = 1e-23
 Identities = 40/170 (23%), Positives = 59/170 (34%), Gaps = 22/170 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TG   GIG     +    G  V++T R    G +A + +       + F Q D +D 
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD--QIQFFQHDSSDE 66

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                L D     FG +  LVNNA I                        +   T     
Sbjct: 67  DGWTKLFDATEKAFGPVSTLVNNAGIA-------------------VNKSVEETTTAEWR 107

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLP-RIVNVSSNMGKLKNTWQGAICY 170
           K L  N  G      + I  ++   L   I+N+SS  G + +   GA   
Sbjct: 108 KLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNA 157

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 90.9 bits (225), Expect = 2e-23
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TGA  GIG E     A+ G  VV++  +       V++++  G       + D+   
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-GQAFACRCDITSE 72

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVS 91
             + +LADF  S+ GK+DILVNNA   G  
Sbjct: 73  QELSALADFAISKLGKVDILVNNAGGGGPK 102

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 90.9 bits (225), Expect = 2e-23
 Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 19/156 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG N+GIG    R +A+ G  V +  R     +E  EK+          +Q DV++ 
Sbjct: 12  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT 71

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +      + +  G +  L+ NA +                            T+E   
Sbjct: 72  DIVTKTIQQIDADLGPISGLIANAGVS-------------------VVKPATELTHEDFA 112

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM 157
                N +G    C  +  L         + V+S+M
Sbjct: 113 FVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSM 148

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 90.9 bits (225), Expect = 2e-23
 Identities = 30/164 (18%), Positives = 55/164 (33%), Gaps = 19/164 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A++TG   GIG  T +     G  VV+    +  G +    +       + F   DV   
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--VISFVHCDVTKD 66

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +L D   ++ GKLDI+  N  +                        I+    E  +
Sbjct: 67  EDVRNLVDTTIAKHGKLDIMFGNVGVL-----------------STTPYSILEAGNEDFK 109

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQ 165
           + +  N YG+  + +    ++  +    IV  +S          
Sbjct: 110 RVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV 153

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 90.9 bits (225), Expect = 3e-23
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 19/170 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVA 59
            ++TG++ GIG       A  G  V +T R+E R  E  +++  +G   + +     DV 
Sbjct: 7   VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 66

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           + +    + +   ++FGK+DILVNNA                                EL
Sbjct: 67  EASGQDDIINTTLAKFGKIDILVNNAGAN-----------------LADGTANTDQPVEL 109

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
            +K  + N+     M +     L  +    +   S   G   ++      
Sbjct: 110 YQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYA 159

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 89.7 bits (222), Expect = 5e-23
 Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 24/169 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG   G+G E V+ L   G  V  +  +E  G +   +L     +  +F + DV+  
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----ERSMFVRHDVSSE 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A    +   V+ + G L++LVNNA I                       ++ T   E   
Sbjct: 65  ADWTLVMAAVQRRLGTLNVLVNNAGIL-------------------LPGDMETGRLEDFS 105

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
           + L+ N       C+  I  ++ +    I+N++S    L          
Sbjct: 106 RLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSA 153

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 89.3 bits (221), Expect = 7e-23
 Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VT      G  +  +L+  G  V       K+  + +E           + QL     
Sbjct: 3  AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQ-KDELEAFA------ETYPQLKPMSE 55

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFG 89
               L + V S +G++D+LV+N     
Sbjct: 56 QEPAELIEAVTSAYGQVDVLVSNDIFAP 83

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.2 bits (221), Expect = 7e-23
 Identities = 38/169 (22%), Positives = 66/169 (39%), Gaps = 24/169 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            VVTG  +GIG   VR   ++G  VV+  +DE  G    ++L        +F   DV   
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-----GAVFILCDVTQE 63

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             + +L      +FG+LD +VNNA                ++     +            
Sbjct: 64  DDVKTLVSETIRRFGRLDCVVNNAGHHP-------PPQRPEETSAQGF-----------R 105

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
           + L  N  G+  + ++ +P L+ S    ++N+SS +G +          
Sbjct: 106 QLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVA 153

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 88.6 bits (219), Expect = 1e-22
 Identities = 37/169 (21%), Positives = 61/169 (36%), Gaps = 23/169 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+V+G  +G+G   VR + + G  VV     ++ G     +L     D+  +  LDV  P
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQP 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A   +  D   + FG L +LVNNA I  +    D                         +
Sbjct: 65  AQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDY-------------------ALTEWQ 105

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
           + L  N  G       ++  ++ +    I+N+SS  G            
Sbjct: 106 RILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTA 154

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.5 bits (219), Expect = 1e-22
 Identities = 43/172 (25%), Positives = 62/172 (36%), Gaps = 31/172 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL-KHSGFDSVIFHQLDVAD 60
           A+VTGA +GIG      L   G  V L   + + G++    L +       +F Q DVAD
Sbjct: 6   ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 65

Query: 61  PATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
              +      V   FG+LDILVNNA +                     W           
Sbjct: 66  QQQLRDTFRKVVDHFGRLDILVNNAGVN----------------NEKNW----------- 98

Query: 121 EKCLRTNYYGSKRMCEVLIPLL---QLSDLPRIVNVSSNMGKLKNTWQGAIC 169
           EK L+ N         + +  +      +   I+N+SS  G +    Q   C
Sbjct: 99  EKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC 150

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 89.3 bits (221), Expect = 2e-22
 Identities = 32/173 (18%), Positives = 54/173 (31%), Gaps = 24/173 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEK-----RGLEAVEKLKHSGFDSVIFHQL 56
            +VTGA  G+G       A  G +VV+           +G  A +K+             
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 57  DVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPT 116
           +         L       FG++D++VNNA I                            +
Sbjct: 70  NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILR-------------------DRSFSRIS 110

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
            E  +   R +  GS ++       ++  +  RI+  +S  G   N  Q    
Sbjct: 111 DEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYS 163

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 87.6 bits (216), Expect = 3e-22
 Identities = 39/175 (22%), Positives = 62/175 (35%), Gaps = 26/175 (14%)

Query: 2   AVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            VVTGAN+GIG   V+QL  +     ++ TARD     E   +LK      V    L V 
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDV----EKATELKSIKDSRVHVLPLTVT 61

Query: 60  DPATIHSLADFVRSQFGK--LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTY 117
              ++ +    V    G   L +L+NNA +                     +     P  
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLL------------------SYGTNTEPNR 103

Query: 118 ELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICYLT 172
            +  + L  N      + + L+PLL+ +      +  S       T    +  +T
Sbjct: 104 AVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT 158

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 87.5 bits (216), Expect = 4e-22
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS-VIFHQLDVAD 60
           ++TG   G+G  T  +LA+ G  + L     +    +   +  +  D+ V+    DV+D
Sbjct: 7  VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 66

Query: 61 PATIHSLADFVRSQFGKLDILVNNAAIF 88
           A + +       +FG++D   NNA I 
Sbjct: 67 EAQVEAYVTATTERFGRIDGFFNNAGIE 94

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 87.0 bits (215), Expect = 6e-22
 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 21/169 (12%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG ++GIGY  V +LAS G  V   +R++K   + + + +  GF  V     D++  
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK-VEASVCDLSSR 69

Query: 62  ATIHSLADFVRSQF-GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
           +    L + V + F GKL+ILVNNA I                     + E    T E  
Sbjct: 70  SERQELMNTVANHFHGKLNILVNNAGIVI-------------------YKEAKDYTVEDY 110

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
              +  N+  +  +  +  P L+ S+   +V +SS  G L   ++    
Sbjct: 111 SLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYG 159

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 87.0 bits (215), Expect = 7e-22
 Identities = 32/169 (18%), Positives = 56/169 (33%), Gaps = 19/169 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++TG   G+G   V +  + G  V +  +      E + +L+    D+V+    DV   
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSA----ERLAELETDHGDNVLGIVGDVRSL 63

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                 A    ++FGK+D L+ NA I+  S                  +          +
Sbjct: 64  EDQKQAASRCVARFGKIDTLIPNAGIWDYS--------------TALVDLPEESLDAAFD 109

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
           +    N  G     +  +P L  S    ++   SN G   N        
Sbjct: 110 EVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTA 157

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 84.7 bits (209), Expect = 4e-21
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 6/85 (7%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           ++TGA  GIG  T+   A  G  +V    +E    EA E +            +DVADP
Sbjct: 8  VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG------AHPVVMDVADP 61

Query: 62 ATIHSLADFVRSQFGKLDILVNNAA 86
          A++        +  G+LD +V+ A 
Sbjct: 62 ASVERGFAEALAHLGRLDGVVHYAG 86

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 83.3 bits (205), Expect = 2e-20
 Identities = 22/88 (25%), Positives = 42/88 (47%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           V+TG++ G+G     + A+    VV+  R ++    +V +         I  + DV   
Sbjct: 10 VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFG 89
          + + +L      +FGKLD+++NNA +  
Sbjct: 70 SDVINLVQSAIKEFGKLDVMINNAGLEN 97

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 82.9 bits (204), Expect = 2e-20
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA +GIG     +L  +G  V +   ++        ++  +G    +  ++DV+D 
Sbjct: 4  ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-GHAVAVKVDVSDR 62

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIF 88
            + +  +  R   G  D++VNNA + 
Sbjct: 63 DQVFAAVEQARKTLGGFDVIVNNAGVA 89

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 82.8 bits (204), Expect = 2e-20
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTGA  GIG E  R+L   G+ V + AR E+     +++L+ +G +       DV   
Sbjct: 5  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-ADGRTCDVRSV 63

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIF 88
            I +L   V  ++G +D+LVNNA   
Sbjct: 64 PEIEALVAAVVERYGPVDVLVNNAGRP 90

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 82.4 bits (203), Expect = 3e-20
 Identities = 29/172 (16%), Positives = 47/172 (27%), Gaps = 31/172 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +   A  GIG +T R+L    +   +     +      E    +   ++ FH  DV  P
Sbjct: 8   VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVP 67

Query: 62  -ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
            A    L   +  Q   +DIL+N A I                                 
Sbjct: 68  VAESKKLLKKIFDQLKTVDILINGAGIL---------------------------DDHQI 100

Query: 121 EKCLRTNYYGSKRMCEVLIPLLQLSDLP---RIVNVSSNMGKLKNTWQGAIC 169
           E+ +  N+ G       ++             I N+ S  G           
Sbjct: 101 ERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYS 152

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 81.7 bits (201), Expect = 7e-20
 Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 19/142 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+ TGA +GIG     +L   G  VV+      +  E V           +  Q D++ P
Sbjct: 9   ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP 68

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           + + +L D   S FG LD +++N+ +                     W + +  T EL +
Sbjct: 69  SEVVALFDKAVSHFGGLDFVMSNSGME-------------------VWCDELEVTQELFD 109

Query: 122 KCLRTNYYGSKRMCEVLIPLLQ 143
           K    N  G   + +  +   +
Sbjct: 110 KVFNLNTRGQFFVAQQGLKHCR 131

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.6 bits (201), Expect = 9e-20
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS----VIFHQLD 57
           A+VTG   GIG   V++L   G  VV+ +R  +R   A ++L+ +   +    VI  Q +
Sbjct: 15  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 74

Query: 58  VADPATIHSLADFVRSQFGKLDILVNNAAI 87
           + +   +++L       FGK++ LVNN   
Sbjct: 75  IRNEEEVNNLVKSTLDTFGKINFLVNNGGG 104

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 81.1 bits (199), Expect = 1e-19
 Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 13/146 (8%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA-VEKLKHSGFDSVIFHQLDVAD 60
           AV+TG  + IG+    +L   G  VV+  R  +   +  V +L  +   S +  + D++ 
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 63

Query: 61  PAT----IHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPT 116
            ++       + D     FG+ D+LVNNA+ +            +  G+         P 
Sbjct: 64  SSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYY--------PTPLLPGDDTNGAADAKPI 115

Query: 117 YELAEKCLRTNYYGSKRMCEVLIPLL 142
                +   +N      +        
Sbjct: 116 DAQVAELFGSNAVAPLFLIRAFARRQ 141

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 79.8 bits (196), Expect = 3e-19
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +VTGA  GIG   +   A  G  +V   R+E+   EAV  L+       I    DV+DP
Sbjct: 8  ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----AEAIAVVADVSDP 63

Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
            + ++      +FG+L  + + A
Sbjct: 64 KAVEAVFAEALEEFGRLHGVAHFA 87

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 79.8 bits (196), Expect = 3e-19
 Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 2/85 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A+VTG +KGIGY  V +LA  G  V   +R+EK   E +E  +  G + V     D+   
Sbjct: 9  ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN-VEGSVCDLLSR 67

Query: 62 ATIHSLADFVRSQF-GKLDILVNNA 85
               L   V   F GKL+ILVNNA
Sbjct: 68 TERDKLMQTVAHVFDGKLNILVNNA 92

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 79.5 bits (195), Expect = 3e-19
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 1/84 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQLDVAD 60
          AVVTG+  GIG      LA+ G  +VL    +   +E V   L       V++   D++ 
Sbjct: 7  AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK 66

Query: 61 PATIHSLADFVRSQFGKLDILVNN 84
             +  L D    Q G++DILVNN
Sbjct: 67 GEAVRGLVDNAVRQMGRIDILVNN 90

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 79.8 bits (196), Expect = 5e-19
 Identities = 22/84 (26%), Positives = 36/84 (42%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A +TG   G+G      L+S G   V+ +R         E++     + V   Q DV DP
Sbjct: 28  AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP 87

Query: 62  ATIHSLADFVRSQFGKLDILVNNA 85
             + +    +    G  +I++NNA
Sbjct: 88  DMVQNTVSELIKVAGHPNIVINNA 111

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 79.4 bits (195), Expect = 5e-19
 Identities = 23/87 (26%), Positives = 37/87 (42%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA +GIG E   +L   G  V++   +     E V              + +V   
Sbjct: 21  ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVV 80

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIF 88
             I  + +     FGKLDI+ +N+ + 
Sbjct: 81  EDIVRMFEEAVKIFGKLDIVCSNSGVV 107

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 78.6 bits (193), Expect = 7e-19
 Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 27/175 (15%)

Query: 2   AVVTGANKGIGYETVRQLASNG-------IIVVLTARDEKRGLEAVEKLKHSGFDSVIFH 54
            ++TGA KGIG     + A           ++VL++R      +   + +  G       
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTI 62

Query: 55  QLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVT 114
             D++D A +  L   +  ++G +D LVNNA +                    ++  +  
Sbjct: 63  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVG-------------------RFGALSD 103

Query: 115 PTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
            T E  +  + TN  G+  + + L  L++      I  ++S             C
Sbjct: 104 LTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC 158

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 78.5 bits (193), Expect = 8e-19
 Identities = 36/169 (21%), Positives = 62/169 (36%), Gaps = 29/169 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA KGIG +TV+ L ++G  VV   R     +   ++        +    +D+ D 
Sbjct: 8   ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVCVDLGDW 62

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                         G +D+LVNNAA+                         +  T E  +
Sbjct: 63  DATEKALG----GIGPVDLLVNNAALVI-------------------MQPFLEVTKEAFD 99

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLP-RIVNVSSNMGKLKNTWQGAIC 169
           +    N     ++ +++   +    +P  IVNVSS +  +         
Sbjct: 100 RSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYS 148

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 78.2 bits (192), Expect = 8e-19
 Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 19/166 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            VVTGA++GIG      L   G  V++      +  E V K   +     I    DV+  
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A + ++       +G +D+                    V +    +   ++       +
Sbjct: 64  ADVEAMMKTAIDAWGTIDV-------------------VVNNAGITRDTLLIRMKKSQWD 104

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           + +  N  G     +    ++      RI+N++S +G + N  Q  
Sbjct: 105 EVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQAN 150

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 77.4 bits (190), Expect = 2e-18
 Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 20/168 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA +GIG E  + LA +   V+  +R +K     V+++K  G++    +  DV+  
Sbjct: 13  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE-SSGYAGDVSKK 71

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I  + + + ++   +DI                    V +    + N  +    +  E
Sbjct: 72  EEISEVINKILTEHKNVDI-------------------LVNNAGITRDNLFLRMKNDEWE 112

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
             LRTN      + + +   +  +   RI+N+SS +G   N  Q    
Sbjct: 113 DVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYS 160

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 76.8 bits (188), Expect = 4e-18
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 1/88 (1%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +VTGA   IG  T  +LA  G  + L   + +   +A   ++  G +    +  DV   
Sbjct: 8  CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE-ARSYVCDVTSE 66

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFG 89
            +    D V   FGK+D L NNA   G
Sbjct: 67 EAVIGTVDSVVRDFGKIDFLFNNAGYQG 94

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 76.8 bits (188), Expect = 4e-18
 Identities = 39/178 (21%), Positives = 65/178 (36%), Gaps = 26/178 (14%)

Query: 2   AVVTGANKGIGYETVRQLA---SNGIIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLD 57
            V+TGA++G G     QLA   S G +++++AR E    +  E+L     D  V+    D
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68

Query: 58  VADPATI----HSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIV 113
           +   A +     ++ +  R +  +  +L+NNAA       GD   GF+   +  + N   
Sbjct: 69  LGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATL-----GDVSKGFLNVNDLAEVNNY- 122

Query: 114 TPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIV--NVSSNMGKLKNTWQGAIC 169
                        N      +    +   Q S        N+SS          G  C
Sbjct: 123 ----------WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYC 170

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 5e-18
 Identities = 39/169 (23%), Positives = 61/169 (36%), Gaps = 29/169 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTGA KGIG  TV+ L + G  VV  +R +      V +        +    +D+ D 
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDW 64

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                         G +D+LVNNAA+                         +  T E  +
Sbjct: 65  EATERALG----SVGPVDLLVNNAAVA-------------------LLQPFLEVTKEAFD 101

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLP-RIVNVSSNMGKLKNTWQGAIC 169
           +    N     ++ +++   L    +P  IVNVSS   +   T     C
Sbjct: 102 RSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYC 150

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 75.6 bits (185), Expect = 1e-17
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++TG+ +GIG          G  V +   + +       ++      +     LDV D 
Sbjct: 8  ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG----PAACAIALDVTDQ 63

Query: 62 ATIHSLADFVRSQFGKLDILVNN 84
          A+I      +  ++G +DILVNN
Sbjct: 64 ASIDRCVAELLDRWGSIDILVNN 86

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (174), Expect = 5e-16
 Identities = 39/168 (23%), Positives = 60/168 (35%), Gaps = 20/168 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTGA+KGIG E    LA  G  VV+TAR ++   + V      G  S  +    + D 
Sbjct: 17  VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 76

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                         G LD+L+ N             S  +   +     +          
Sbjct: 77  TFAEQFVAQAGKLMGGLDMLILNHITNT--------SLNLFHDDIHHVRKS--------- 119

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
             +  N+     +    +P+L+ S+   IV VSS  GK+      A  
Sbjct: 120 --MEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYS 164

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 70.6 bits (172), Expect = 8e-16
 Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 23/168 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTGA++GIG      LA+ G  V+ TA  E       + L  +G        L+V DP
Sbjct: 7   ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK----GLMLNVTDP 62

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
           A+I S+ + +R++FG++DILVNNA I                    + N ++    E   
Sbjct: 63  ASIESVLEKIRAEFGEVDILVNNAGIT-------------------RDNLLMRMKDEEWN 103

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
             + TN     R+ + ++  +      RI+ + S +G + N  Q    
Sbjct: 104 DIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYA 151

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 69.5 bits (169), Expect = 2e-15
 Identities = 29/171 (16%), Positives = 53/171 (30%), Gaps = 21/171 (12%)

Query: 2   AVVTGA--NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
           A+V G    + +G+    +L   G  V L+ + E+   EA +  +  G   +      V 
Sbjct: 11  ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRAD--VT 68

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
               + +L   V+  FG LD LV+  A                          +    + 
Sbjct: 69  QDEELDALFAGVKEAFGGLDYLVHAIAFAPR---------------EAMEGRYIDTRRQD 113

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAICY 170
               L  + Y    +     PLL+      IV ++    +        +  
Sbjct: 114 WLLALEVSAYSLVAVARRAEPLLREG--GGIVTLTYYASEKVVPKYNVMAI 162

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 68.6 bits (167), Expect = 4e-15
 Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 31/168 (18%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +VTG N+GIG    ++LA++G  V +T R                   +   ++DV D 
Sbjct: 10  VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP------------KGLFGVEVDVTDS 57

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +      V    G +++LV+NA +            F+      K+ +++      A 
Sbjct: 58  DAVDRAFTAVEEHQGPVEVLVSNAGLSAD--------AFLMRMTEEKFEKVINANLTGAF 109

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
           +  +      +R               R++ + S  G      Q    
Sbjct: 110 RVAQRASRSMQRNKF-----------GRMIFIGSVSGLWGIGNQANYA 146

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 66.2 bits (161), Expect = 3e-14
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 16/84 (19%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +V  A++GIG      L+  G  V + AR+E       E LK SG      H+  V D 
Sbjct: 7  VLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRSG------HRYVVCD- 52

Query: 62 ATIHSLADFVRSQFGKLDILVNNA 85
            +    D +  +  ++DILV NA
Sbjct: 53 --LRKDLDLLFEKVKEVDILVLNA 74

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 66.6 bits (161), Expect = 3e-14
 Identities = 26/105 (24%), Positives = 36/105 (34%), Gaps = 18/105 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV-EKLKHSGFDSVIFHQ----- 55
           A+VTGA K +G      L + G  V L          A+   L     +S I  Q     
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 56  ------------LDVADPATIHSLADFVRSQFGKLDILVNNAAIF 88
                         V        L     + +G+ D+LVNNA+ F
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF 109

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 64.9 bits (157), Expect = 1e-13
 Identities = 20/168 (11%), Positives = 46/168 (27%), Gaps = 20/168 (11%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            V++G   GIG  T + L + G  +V     +   +                   D++  
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------------DLSTA 45

Query: 62  ATI-HSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELA 120
                ++AD +      +D LV  A +   +     +      G     +  +    +  
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH 105

Query: 121 EK-CLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGA 167
           +   +  +   S  +     PL    +        + +          
Sbjct: 106 QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNL 153

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (153), Expect = 3e-13
 Identities = 32/167 (19%), Positives = 58/167 (34%), Gaps = 29/167 (17%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            ++T A +GIG       A  G  V+ T  +E + L+ +EK     +  +    LDV   
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESK-LQELEK-----YPGIQTRVLDVTKK 62

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             I   A+ V     +LD+L N A                     +    ++    +  +
Sbjct: 63  KQIDQFANEVE----RLDVLFNVAGF-------------------VHHGTVLDCEEKDWD 99

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAI 168
             +  N      M +  +P +       I+N+SS    +K      +
Sbjct: 100 FSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCV 146

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 7e-13
 Identities = 33/174 (18%), Positives = 57/174 (32%), Gaps = 28/174 (16%)

Query: 2   AVVTGANKGIGYETVRQLASNG---IIVVLTARD---EKRGLEAVEKLKHSGFDSVIFHQ 55
            ++TG + GIG     +LAS+      V  T RD   + R  EA   L      S+   Q
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPP-GSLETLQ 63

Query: 56  LDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTP 115
           LDV D  ++ +  + V      + +                               +   
Sbjct: 64  LDVRDSKSVAAARERVTEGRVDVLVCNAG---------------------LGLLGPLEAL 102

Query: 116 TYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
             +     L  N  G+ RM +  +P ++     R++   S  G +   +    C
Sbjct: 103 GEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC 156

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 61.4 bits (148), Expect = 1e-12
 Identities = 15/170 (8%), Positives = 39/170 (22%), Gaps = 33/170 (19%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            +V G    +G   +     NG  V+          ++            I    +    
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS-----------NILVDGNKNWT 53

Query: 62  ATIHSLADFVRS--QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
               S+ +   S  Q  ++D +   A  +                     +       + 
Sbjct: 54  EQEQSILEQTASSLQGSQVDGVFCVAGGWA------------------GGSASSKDFVKN 95

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
           A+  ++ + + S    ++      L     +    +              
Sbjct: 96  ADLMIKQSVWSSAIAAKLATT--HLKPGGLLQLTGAAAAMGPTPSMIGYG 143

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.5 bits (138), Expect = 3e-11
 Identities = 12/86 (13%), Positives = 24/86 (27%), Gaps = 13/86 (15%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           +V G    +G   V+   +    V      E     A            +  ++  +  
Sbjct: 5  VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASA-----------SVIVKMTDSFT 53

Query: 62 ATIHSLADFVRSQFG--KLDILVNNA 85
               +   V    G  K+D ++  A
Sbjct: 54 EQADQVTAEVGKLLGDQKVDAILCVA 79

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 57.6 bits (138), Expect = 4e-11
 Identities = 27/170 (15%), Positives = 55/170 (32%), Gaps = 20/170 (11%)

Query: 2   AVVTGA--NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
            +VTG      I Y   + +   G  +  T +++K      E     G  S I  Q DVA
Sbjct: 8   ILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG--SDIVLQCDVA 65

Query: 60  DPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYEL 119
           + A+I ++   +   + K D  V++                    + +  + +   T E 
Sbjct: 66  EDASIDTMFAELGKVWPKFDGFVHSIGFAPG--------------DQLDGDYVNAVTREG 111

Query: 120 AEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTWQGAIC 169
            +     + Y    M +       L+    ++ +S    +        + 
Sbjct: 112 FKIAHDISSYSFVAMAKACRS--MLNPGSALLTLSYLGAERAIPNYNVMG 159

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 57.0 bits (136), Expect = 6e-11
 Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 3/86 (3%)

Query: 2  AVVTGANKGIGYETVRQL---ASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDV 58
           ++TG N+G+G   V+ L         +  T R+ ++  E  +  K+     ++   L  
Sbjct: 5  ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN 64

Query: 59 ADPATIHSLADFVRSQFGKLDILVNN 84
           D            ++   L++L NN
Sbjct: 65 FDAYDKLVADIEGVTKDQGLNVLFNN 90

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 56.6 bits (135), Expect = 1e-10
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 4/89 (4%)

Query: 2  AVVTGA--NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
           ++ G   NK I Y   +   + G  +  T  +E    + V  +          ++LDV+
Sbjct: 8  GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS-PYVYELDVS 65

Query: 60 DPATIHSLADFVRSQFGKLDILVNNAAIF 88
                SL + V+   G LD +V++ A  
Sbjct: 66 KEEHFKSLYNSVKKDLGSLDFIVHSVAFA 94

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (134), Expect = 1e-10
 Identities = 25/174 (14%), Positives = 49/174 (28%), Gaps = 23/174 (13%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AV+TG   G+G  T  +L   G   VL       G    +KL ++   +      +    
Sbjct: 8   AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQ 67

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +             ++                         +     +  T T E  +
Sbjct: 68  TALALAKGKFGRVDVAVNCAGIA-----------------VASKTYNLKKGQTHTLEDFQ 110

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLP------RIVNVSSNMGKLKNTWQGAIC 169
           + L  N  G+  +  ++   +  ++         I+N +S         Q A  
Sbjct: 111 RVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYS 164

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 54.8 bits (130), Expect = 4e-10
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 2/90 (2%)

Query: 2  AVVTGA--NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
           +V+G   +  I +   R     G  +VLT  D  R ++ +     +    +     +  
Sbjct: 9  ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEE 68

Query: 60 DPATIHSLADFVRSQFGKLDILVNNAAIFG 89
            A++            KLD +V++     
Sbjct: 69 HLASLAGRVTEAIGAGNKLDGVVHSIGFMP 98

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 54.0 bits (129), Expect = 6e-10
 Identities = 24/175 (13%), Positives = 46/175 (26%), Gaps = 35/175 (20%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           A+VTG   G+G      L + G  VV+     +                +I+ + DV   
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------------DLIYVEGDVTRE 50

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
             +       + +     ++          + G                       E   
Sbjct: 51  EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGK----------------EGPHGLESFR 94

Query: 122 KCLRTNYYGSKRMCEVLIPLLQLSDLP------RIVNVSSNMGKLKNTWQGAICY 170
           + L  N  G+  +  +    ++ +          IVN +S         Q A   
Sbjct: 95  RVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAA 149

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 49.8 bits (117), Expect = 3e-08
 Identities = 10/88 (11%), Positives = 28/88 (31%), Gaps = 2/88 (2%)

Query: 2  AVVTGA--NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA 59
          A + G   + G G+   + LA+ G  +++        +      +     S +     + 
Sbjct: 11 AFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLM 70

Query: 60 DPATIHSLADFVRSQFGKLDILVNNAAI 87
          +   ++ L     +     + +  N   
Sbjct: 71 EIKKVYPLDAVFDNPEDVPEDVKANKRY 98

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 47.4 bits (111), Expect = 1e-07
 Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 2/83 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          A++ G    +G     +LA+ G  +V+ +R E++      + +    D      +   D 
Sbjct: 4  ALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGD-ASITGMKNEDA 61

Query: 62 ATIHSLADFVRSQFGKLDILVNN 84
          A    +A         +D   + 
Sbjct: 62 AEACDIAVLTIPWEHAIDTARDL 84

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 47.2 bits (110), Expect = 2e-07
 Identities = 12/118 (10%), Positives = 36/118 (30%), Gaps = 33/118 (27%)

Query: 2   AVVTGA--NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLK--------------- 44
             + G     G G+   ++L+   + ++         +                      
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64

Query: 45  ----------------HSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAA 86
                               ++    + ++    TI  +A+ +  ++GK+++LV++ A
Sbjct: 65  NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLA 122

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 44.6 bits (104), Expect = 1e-06
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 2  AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLK 44
           +VTG   G+G +  R LA  G   ++L +R       A E + 
Sbjct: 12 VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVA 55

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 43.4 bits (101), Expect = 4e-06
 Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 4  VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
          VTG +  IG  T  QL  NG  V++           +  ++  G     F + D+ + A 
Sbjct: 5  VTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEAL 64

Query: 64 IHSLADFVRSQFGKLDILVNNAAIFGV 90
          +  +          +D +++ A +  V
Sbjct: 65 MTEI-----LHDHAIDTVIHFAGLKAV 86

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.8 bits (94), Expect = 3e-05
 Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 5/87 (5%)

Query: 4  VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
          VTG    IG  TV +L  NG   V+         ++V +L+      + F+++D+ D   
Sbjct: 6  VTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKG 65

Query: 64 IHSLADFVRSQFGKLDILVNNAAIFGV 90
          +  +      +  K+D +++ A +  V
Sbjct: 66 LEKV-----FKEYKIDSVIHFAGLKAV 87

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.4 bits (90), Expect = 8e-05
 Identities = 11/64 (17%), Positives = 18/64 (28%), Gaps = 2/64 (3%)

Query: 2  AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
            VTG     G      L + G  V   +          E  + +  D +     D+ D 
Sbjct: 11 VFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVA--DGMQSEIGDIRDQ 68

Query: 62 ATIH 65
            + 
Sbjct: 69 NKLL 72

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 38.1 bits (87), Expect = 2e-04
 Identities = 10/66 (15%), Positives = 19/66 (28%), Gaps = 4/66 (6%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPA 62
           V GA    G   +R  A+ G  V           + +   +     +V   Q  + +  
Sbjct: 7  AVVGATGRQGASLIRVAAAVGHHVRAQVHSL----KGLIAEELQAIPNVTLFQGPLLNNV 62

Query: 63 TIHSLA 68
           +    
Sbjct: 63 PLMDTL 68

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 9/89 (10%)

Query: 4  VTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
          +TG    IG   VR +  N    +V +        LE++  +  S  +   F   D+ D 
Sbjct: 5  ITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISES--NRYNFEHADICDS 62

Query: 62 ATIHSLADFVRSQFGKLDILVNNAAIFGV 90
          A I  + +       + D +++ AA   V
Sbjct: 63 AEITRIFEQY-----QPDAVMHLAAESHV 86

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 38.0 bits (87), Expect = 3e-04
 Identities = 17/64 (26%), Positives = 24/64 (37%)

Query: 4  VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT 63
          VTG    IG   V  + +N   V +T  D+         L+    D V     D+AD   
Sbjct: 7  VTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAEL 66

Query: 64 IHSL 67
          +  L
Sbjct: 67 VDKL 70

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 37.9 bits (86), Expect = 4e-04
 Identities = 14/63 (22%), Positives = 20/63 (31%), Gaps = 1/63 (1%)

Query: 4  VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSV-IFHQLDVADPA 62
          VTGAN  +    V QL  +G  V  TAR   +     ++               D+    
Sbjct: 16 VTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQG 75

Query: 63 TIH 65
             
Sbjct: 76 AYD 78

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 37.2 bits (85), Expect = 4e-04
 Identities = 22/160 (13%), Positives = 35/160 (21%), Gaps = 33/160 (20%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP 61
           AVV      +G  +   LA  G  VVL  R   +   A + +       V     + AD 
Sbjct: 26  AVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK--VNVTAAETADD 83

Query: 62  ATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAE 121
                              +    AI    +   A                        +
Sbjct: 84  -------ASRAEAVKGAHFVFTAGAIGLELLPQAAW-----------------------Q 113

Query: 122 KCLRTNY-YGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL 160
                           + I  +  +D  +        G L
Sbjct: 114 NESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGAL 153

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 37.5 bits (86), Expect = 4e-04
 Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 33/158 (20%)

Query: 2   AVVTGANKGIGYETVRQLASNGIIVV----LTARDEKRGLEAVEKLKHSGFDSVIFHQLD 57
           A++TG     G      L   G  V       +      ++ + +  H+       H  D
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 63

Query: 58  VADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTY 117
           ++D + +         +  + D + N  A+  V+V                       ++
Sbjct: 64  LSDTSNLTR-----ILREVQPDEVYNLGAMSHVAV-----------------------SF 95

Query: 118 ELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS 155
           E  E     +  G+ R+ E +   L L    R    S+
Sbjct: 96  ESPEYTADVDAMGTLRLLEAIR-FLGLEKKTRFYQAST 132

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (82), Expect = 0.001
 Identities = 10/33 (30%), Positives = 13/33 (39%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKR 35
           + GA    G  T+ Q    G  V +  RD  R
Sbjct: 7  AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR 39

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 36.3 bits (82), Expect = 0.001
 Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 1/57 (1%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRG-LEAVEKLKHSGFDSVIFHQLDV 58
          ++ G    IG   V    S G    +  R E    ++ V+ L +         +  +
Sbjct: 7  LIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (80), Expect = 0.002
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 4  VTGANKGIGYETVRQLASNGIIVVL------TARDEKRGLEAVEKLKHSGFDSVIFHQLD 57
          VTG    IG  TV +L   G + V+        R      E++ +++     SV F ++D
Sbjct: 7  VTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMD 66

Query: 58 VADPATIH 65
          + D   + 
Sbjct: 67 ILDQGALQ 74

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 35.1 bits (79), Expect = 0.002
 Identities = 9/58 (15%), Positives = 16/58 (27%), Gaps = 2/58 (3%)

Query: 3  VVTGANKGIGYETVRQLASNGIIVVLTARDEKRG--LEAVEKLKHSGFDSVIFHQLDV 58
          ++ GA   IG    +     G    L  R+       E  + L+             +
Sbjct: 7  LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 64

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	174
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.98
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.98
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.98
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.98
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.97
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.97
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.97
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.97
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.97
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.97
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.96
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.96
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.95
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.95
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.95
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.95
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.95
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.94
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.93
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.93
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.93
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.89
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.89
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.89
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.87
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.87
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.76
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.69
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.66
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.66
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.65
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.64
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.59
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.58
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.55
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.54
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.53
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.49
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.48
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.48
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.46
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.44
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.38
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.38
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.37
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.37
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.35
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.35
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.33
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.3
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.25
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.22
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.19
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.1
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.04
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.02
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.0
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.76
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.56
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.37
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.2
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.07
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.01
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.0
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.9
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.86
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.86
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.83
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.79
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.77
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.74
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.72
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.58
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.52
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.52
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.52
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.48
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.47
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.44
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.43
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.43
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.4
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.37
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.3
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.28
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.28
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.27
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.27
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.24
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.23
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.22
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.22
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.21
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.17
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.16
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.06
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.03
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.02
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.0
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.99
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.98
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.97
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.97
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.94
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.94
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.89
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.89
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.87
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.75
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.75
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.67
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.65
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.61
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.59
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.55
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.52
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.52
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.51
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.39
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.33
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.33
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.25
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.21
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.17
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.96
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.86
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	95.83
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.74
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.66
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.65
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.63
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.42
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	95.2
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	95.2
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	95.17
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.11
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.07
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	95.03
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.94
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.86
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.76
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.7
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.51
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.47
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	94.43
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	94.33
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.18
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	94.14
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.1
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.05
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.01
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	93.63
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	93.6
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.46
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.27
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.24
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.22
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.09
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	92.74
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	92.73
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	92.73
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.63
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.55
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	92.49
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.43
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.31
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.25
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.25
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.1
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.97
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.88
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	91.39
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.15
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.03
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	91.02
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.93
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.89
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.73
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	90.63
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	90.61
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	90.53
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	90.49
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.44
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.41
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	90.34
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.04
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.03
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	89.9
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	89.88
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	89.78
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	89.76
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	89.57
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	89.56
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	89.51
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	89.42
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	89.4
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.23
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	88.95
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	88.81
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.74
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	88.74
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	88.67
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.59
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	88.57
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	88.5
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	88.36
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	88.32
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	87.94
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.72
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	87.61
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	87.48
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	87.16
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	87.13
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	86.55
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	86.47
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	86.41
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	86.02
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	85.8
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	85.71
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	85.59
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	85.19
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	85.14
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	85.06
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	84.97
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	84.96
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	84.8
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	84.76
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	84.66
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	84.58
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	84.51
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	84.31
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	84.28
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	84.13
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	83.84
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	83.79
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	83.64
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	83.56
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	83.37
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	83.09
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	83.0
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	82.87
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	82.85
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	82.79
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	82.64
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	82.62
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	82.6
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	82.24
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	82.15
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	82.02
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	82.01
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	81.74
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	81.69
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	81.65
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	81.54
d1wbha1	213	KDPG aldolase {Escherichia coli [TaxId: 562]}	81.47
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	81.36
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	81.26
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	81.23
d1mxsa_	216	KDPG aldolase {Pseudomonas putida [TaxId: 303]}	81.11
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	81.04
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	80.71
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	80.48
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	80.35
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	80.16

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=6.6e-38  Score=229.13  Aligned_cols=153  Identities=22%  Similarity=0.271  Sum_probs=140.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-------EEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-------VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-------v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      ++|||||++|||+++|++|+++|++       |++++|+.+.+++..+++++.++ ++.++.+|++|+++++++++++.+
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA-LTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999997       89999999888889888887664 588999999999999999999999


Q ss_pred             hcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEE
Q 035504           74 QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNV  153 (174)
Q Consensus        74 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~i  153 (174)
                      ++|++|+||||||....                   .++.+.+.++|+++|++|+.|+++++|+++|+|++++.|+||++
T Consensus        82 ~~g~iDilvnnAg~~~~-------------------~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~i  142 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRF-------------------GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFI  142 (240)
T ss_dssp             HTSCCSEEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             HcCCcceeecccccccC-------------------CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEE
Confidence            99999999999998543                   23566788999999999999999999999999999988999999


Q ss_pred             ecCCCcccCCCCcceeeecc
Q 035504          154 SSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       154 sS~~~~~~~~~~~~y~~~k~  173 (174)
                      ||.++..+.|+...|+++|+
T Consensus       143 sS~~~~~~~~~~~~Y~asK~  162 (240)
T d2bd0a1         143 TSVAATKAFRHSSIYCMSKF  162 (240)
T ss_dssp             CCGGGTSCCTTCHHHHHHHH
T ss_pred             echhhcCCCCCChHHHHHHH
Confidence            99999999999999999985

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.1e-37  Score=228.66  Aligned_cols=155  Identities=21%  Similarity=0.211  Sum_probs=140.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +.++..+++|++|+++++++++++.+++|+||
T Consensus         6 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iD   85 (258)
T d1iy8a_           6 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRID   85 (258)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999999988888888876654 34689999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+..+.                  .++.+++.++|++.|++|+.++++++|+++|.|++++.|+||++||..+.
T Consensus        86 iLVnnAG~~~~~------------------~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  147 (258)
T d1iy8a_          86 GFFNNAGIEGKQ------------------NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGI  147 (258)
T ss_dssp             EEEECCCCCCCC------------------BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             EEEECCcccccC------------------CchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhc
Confidence            999999985432                  23456788999999999999999999999999999989999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+++|+
T Consensus       148 ~~~~~~~~Y~asKa  161 (258)
T d1iy8a_         148 RGIGNQSGYAAAKH  161 (258)
T ss_dssp             SBCSSBHHHHHHHH
T ss_pred             cCCCCchHHHHHHH
Confidence            99999999999985

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.8e-37  Score=225.90  Aligned_cols=154  Identities=27%  Similarity=0.356  Sum_probs=139.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.+..+.++..+++|++|+++++++++++.+++|+||+
T Consensus         7 ~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   86 (251)
T d1vl8a_           7 VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT   86 (251)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999999988888888887766667999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc-
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK-  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~-  159 (174)
                      ||||||+...                   .++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||+++|..+. 
T Consensus        87 LVnnAG~~~~-------------------~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~  147 (251)
T d1vl8a_          87 VVNAAGINRR-------------------HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE  147 (251)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC
T ss_pred             EEECCCCCCC-------------------CChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc
Confidence            9999998532                   23566788999999999999999999999999999999999999998764 


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       148 ~~~~~~~~Y~asKa  161 (251)
T d1vl8a_         148 VTMPNISAYAASKG  161 (251)
T ss_dssp             CCSSSCHHHHHHHH
T ss_pred             ccCccccchHHHHH
Confidence            47788899999985

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.5e-37  Score=229.81  Aligned_cols=154  Identities=25%  Similarity=0.286  Sum_probs=139.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-hHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+. +.+++..+++.+.++.++.++++|++|+++++++++++.+++|+||
T Consensus         6 ~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   85 (260)
T d1x1ta1           6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRID   85 (260)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCc
Confidence            589999999999999999999999999999974 4566777777776666799999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+..+                   .++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||++||..+.
T Consensus        86 iLVnnAG~~~~-------------------~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~  146 (260)
T d1x1ta1          86 ILVNNAGIQHT-------------------ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL  146 (260)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             EEEeecccccC-------------------CchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce
Confidence            99999998543                   23556788999999999999999999999999999988999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+++|+
T Consensus       147 ~~~~~~~~Y~asKa  160 (260)
T d1x1ta1         147 VASANKSAYVAAKH  160 (260)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             eccCCcchhhhhhh
Confidence            99999999999985

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-37  Score=226.58  Aligned_cols=153  Identities=26%  Similarity=0.311  Sum_probs=140.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.++ ++..+.||++|+++++++++++.+++|++|+
T Consensus         9 v~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~-~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idi   87 (244)
T d1yb1a_           9 IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEIGDVSI   87 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHcCCCce
Confidence            589999999999999999999999999999999999999999987664 5999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   ...+.+.+.++++|++|++|++++++.++|.|++++.|+||++||..+..
T Consensus        88 linnag~~~~~-------------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~  148 (244)
T d1yb1a_          88 LVNNAGVVYTS-------------------DLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV  148 (244)
T ss_dssp             EEECCCCCCCC-------------------CCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC
T ss_pred             eEeeccccccc-------------------cccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC
Confidence            99999986432                   34566788999999999999999999999999999999999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+.+.|+++|+
T Consensus       149 ~~~~~~~Y~asKa  161 (244)
T d1yb1a_         149 SVPFLLAYCSSKF  161 (244)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHH
Confidence            9999999999985

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.3e-37  Score=226.81  Aligned_cols=153  Identities=27%  Similarity=0.267  Sum_probs=140.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++++.++ ++..+.+|++|+++++++++++.+++|++|+
T Consensus        12 valITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   90 (251)
T d2c07a1          12 VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEHKNVDI   90 (251)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHhcCCcee
Confidence            589999999999999999999999999999999989999999977654 5899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                   .+.+.+.++|+++|++|+.++++++|+++|.|++++.|+||++||+.+..
T Consensus        91 lvnnag~~~~~-------------------~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~  151 (251)
T d2c07a1          91 LVNNAGITRDN-------------------LFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT  151 (251)
T ss_dssp             EEECCCCCCCC-------------------CTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH
T ss_pred             eeecccccccc-------------------ccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC
Confidence            99999985432                   24566788999999999999999999999999999999999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+..+|+++|+
T Consensus       152 ~~~~~~~Y~asKa  164 (251)
T d2c07a1         152 GNVGQANYSSSKA  164 (251)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCHHHHHHHH
Confidence            9999999999985

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=9.2e-37  Score=225.20  Aligned_cols=153  Identities=29%  Similarity=0.345  Sum_probs=139.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++++.+. ++.++++|++|+++++++++++.++||+||+
T Consensus         4 ValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~-~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (257)
T d2rhca1           4 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERYGPVDV   82 (257)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            579999999999999999999999999999999989999999987664 5999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhh--ccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPL--LQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--m~~~~~g~iv~isS~~~  158 (174)
                      ||||||+..+                   .++.+.+.++|++.|++|+.++++++|+++|+  |++++.|+||++||..+
T Consensus        83 lVnnAG~~~~-------------------~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~  143 (257)
T d2rhca1          83 LVNNAGRPGG-------------------GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGG  143 (257)
T ss_dssp             EEECCCCCCC-------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGG
T ss_pred             EEecccccCC-------------------CChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccc
Confidence            9999998543                   23456788999999999999999999999997  45666799999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|+...|+++|+
T Consensus       144 ~~~~~~~~~Y~asKa  158 (257)
T d2rhca1         144 KQGVVHAAPYSASKH  158 (257)
T ss_dssp             TSCCTTCHHHHHHHH
T ss_pred             ccccccchhHHHHHH
Confidence            999999999999985

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=5.9e-37  Score=226.54  Aligned_cols=154  Identities=23%  Similarity=0.229  Sum_probs=141.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++++.+. ++..+.+|++|+++++++++++.+++|++|+
T Consensus         7 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   85 (260)
T d1zema1           7 VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSVVRDFGKIDF   85 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHhCCCCe
Confidence            589999999999999999999999999999999888888888887664 5899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||...+.                  .++.+.+.++|++.|++|+.++++++|+++|.|++++.|+||++||..+..
T Consensus        86 lVnnaG~~~~~------------------~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~  147 (260)
T d1zema1          86 LFNNAGYQGAF------------------APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK  147 (260)
T ss_dssp             EEECCCCCCCC------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS
T ss_pred             ehhhhcccccc------------------CccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc
Confidence            99999975321                  235677889999999999999999999999999998899999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       148 ~~~~~~~Y~asKa  160 (260)
T d1zema1         148 GPPNMAAYGTSKG  160 (260)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CCcchHHHHHHHH
Confidence            9999999999985

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5e-37  Score=224.95  Aligned_cols=153  Identities=22%  Similarity=0.279  Sum_probs=137.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEee-ChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTAR-DEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++.++ +.+.+++..+++++.+ .++.++++|++|+++++++++++.+++|++|
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-GQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT-CEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC-CcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999998765 5555667777777665 4688999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||....                   .++.+.+.++|++.|++|++++++++|+++|+|++++.|+||++||+.+.
T Consensus        82 iLVnnAg~~~~-------------------~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~  142 (244)
T d1edoa_          82 VVVNNAGITRD-------------------TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL  142 (244)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred             ccccccccccc-------------------cchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhc
Confidence            99999998543                   23566788999999999999999999999999999889999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+++|+
T Consensus       143 ~~~~~~~~Y~asKa  156 (244)
T d1edoa_         143 IGNIGQANYAAAKA  156 (244)
T ss_dssp             HCCTTCHHHHHHHH
T ss_pred             CCCCCCHHHHHHHH
Confidence            99999999999985

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=2.2e-36  Score=222.35  Aligned_cols=152  Identities=27%  Similarity=0.275  Sum_probs=137.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..  +.++.++.+|++|+++++++++++.+++|+||+
T Consensus         8 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   85 (251)
T d1zk4a1           8 VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST   85 (251)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC--CCcEEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence            589999999999999999999999999999998888888777754  236899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCC-eEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP-RIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~iv~isS~~~~  159 (174)
                      ||||||...+                   .++.+.+.++|++.|++|+.++++++|+++|.|++++.| +||++||+.+.
T Consensus        86 LVnnAg~~~~-------------------~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~  146 (251)
T d1zk4a1          86 LVNNAGIAVN-------------------KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF  146 (251)
T ss_dssp             EEECCCCCCC-------------------CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT
T ss_pred             EEeccccccc-------------------cchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecccee
Confidence            9999998543                   234667889999999999999999999999999988865 89999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+++|+
T Consensus       147 ~~~~~~~~Y~asKa  160 (251)
T d1zk4a1         147 VGDPSLGAYNASKG  160 (251)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             ccCCCchhHHHHHH
Confidence            99999999999985

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1.9e-36  Score=223.29  Aligned_cols=153  Identities=22%  Similarity=0.331  Sum_probs=138.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.++++.+++++.++ ++.++++|++|+++++++++++.++||+||+
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            479999999999999999999999999999999989999999987764 5899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC-CCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD-LPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~-~g~iv~isS~~~~  159 (174)
                      ||||||+...                   .++.+++.++|+++|++|+.|+++++|+++|+|.+++ .|+|+++||..+.
T Consensus        82 lVnnAG~~~~-------------------~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~  142 (255)
T d1gega_          82 IVNNAGVAPS-------------------TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH  142 (255)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             EEeccccccc-------------------CcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhc
Confidence            9999998542                   2356678899999999999999999999999876654 5789999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+++|+
T Consensus       143 ~~~~~~~~Y~asKa  156 (255)
T d1gega_         143 VGNPELAVYSSSKF  156 (255)
T ss_dssp             SCCTTBHHHHHHHH
T ss_pred             ccCcccccchhCHH
Confidence            99999999999985

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.4e-36  Score=223.79  Aligned_cols=152  Identities=24%  Similarity=0.298  Sum_probs=140.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++++.++ ++.++++|++|+++++++++++.+++|++|+
T Consensus        13 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~-~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDi   91 (255)
T d1fmca_          13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             EEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            589999999999999999999999999999999989999999988764 5889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||...+.                    ..+.+.++|++.|++|+.++++++|.++|+|++++.|+||++||..+..
T Consensus        92 lvnnAG~~~~~--------------------~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~  151 (255)
T d1fmca_          92 LVNNAGGGGPK--------------------PFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN  151 (255)
T ss_dssp             EEECCCCCCCC--------------------CTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC
T ss_pred             eeeCCcCCCCC--------------------cccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc
Confidence            99999985421                    1356788999999999999999999999999999989999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+..+|+++|+
T Consensus       152 ~~~~~~~Y~asKa  164 (255)
T d1fmca_         152 KNINMTSYASSKA  164 (255)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             cccccccchhHHH
Confidence            9999999999985

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-36  Score=223.17  Aligned_cols=150  Identities=30%  Similarity=0.360  Sum_probs=137.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+++.+++..+++..    +...+.+|++|+++++++++++.+++|++|+
T Consensus         6 ~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_           6 IALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA----NGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----CCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            589999999999999999999999999999998888887777743    4788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   .++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||++||..+..
T Consensus        82 lVnnAg~~~~-------------------~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~  142 (243)
T d1q7ba_          82 LVNNAGITRD-------------------NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM  142 (243)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             ehhhhhhccc-------------------cccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC
Confidence            9999998543                   235667889999999999999999999999999998889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+..+|+++|+
T Consensus       143 ~~~~~~~Y~asKa  155 (243)
T d1q7ba_         143 GNGGQANYAAAKA  155 (243)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCHHHHHHHH
Confidence            9999999999985

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.3e-36  Score=221.23  Aligned_cols=150  Identities=25%  Similarity=0.339  Sum_probs=137.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+++.+++..+++.    .+..++++|++|+++++++++++.+++|++|+
T Consensus         8 ~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           8 VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----CcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            58999999999999999999999999999999888777777764    35888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   .++.+.+.++|+++|++|+.++++++|.++|.|++++.|+||++||..+..
T Consensus        84 linnAG~~~~-------------------~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~  144 (244)
T d1nffa_          84 LVNNAGILNI-------------------GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA  144 (244)
T ss_dssp             EEECCCCCCC-------------------BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEECCcccCC-------------------CchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccc
Confidence            9999998543                   234567889999999999999999999999999999889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       145 ~~~~~~~Y~asKa  157 (244)
T d1nffa_         145 GTVACHGYTATKF  157 (244)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             ccccccchhhHHH
Confidence            9999999999985

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.6e-36  Score=223.31  Aligned_cols=150  Identities=27%  Similarity=0.344  Sum_probs=136.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+++++..+++.    .++.++++|++|+++++++++++.+++|++|+
T Consensus         7 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_           7 TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG----DAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG----GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----CceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            58999999999999999999999999999999887777666653    45899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+..+                   .++.+.+.++|+++|++|+.++++++|+++|+|++++.|+||++||..+..
T Consensus        83 lVnnAg~~~~-------------------~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~  143 (254)
T d1hdca_          83 LVNNAGISTG-------------------MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM  143 (254)
T ss_dssp             EEECCCCCCC-------------------SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEecCccccc-------------------cccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc
Confidence            9999998543                   234667889999999999999999999999999999899999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       144 ~~~~~~~Y~asKa  156 (254)
T d1hdca_         144 GLALTSSYGASKW  156 (254)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             cccchhhHHHHHH
Confidence            9999999999985

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=4.1e-36  Score=221.87  Aligned_cols=153  Identities=28%  Similarity=0.324  Sum_probs=140.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC-Ccc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG-KLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g-~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+++++..+++++.+ .++.++.+|++|+++++++++++.++++ ++|
T Consensus        10 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id   88 (259)
T d2ae2a_          10 TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVANHFHGKLN   88 (259)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence            58999999999999999999999999999999999999999988766 4588999999999999999999999987 799


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||....                   .++.+.+.++|++.|++|+.++++++|.++|+|++++.|+||++||..+.
T Consensus        89 ilvnnAG~~~~-------------------~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  149 (259)
T d2ae2a_          89 ILVNNAGIVIY-------------------KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA  149 (259)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT
T ss_pred             EEEECCceecc-------------------CccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccc
Confidence            99999998543                   23456788999999999999999999999999999999999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+++|+
T Consensus       150 ~~~~~~~~Y~asKa  163 (259)
T d2ae2a_         150 LAVPYEAVYGATKG  163 (259)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             cccccccchHHHHH
Confidence            99999999999985

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=2.5e-36  Score=221.62  Aligned_cols=151  Identities=26%  Similarity=0.339  Sum_probs=133.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|++.+  +..+.+++.+ .++..+++|++|+++++++++++.+++|+||+
T Consensus         7 valVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g-~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           7 LAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLG-RRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcC-CcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999997643  2233344444 56999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+...                   .++.+.+.++|+++|++|+.++++++|+++|.|++++.|+||++||..+..
T Consensus        84 lVnnAG~~~~-------------------~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~  144 (247)
T d2ew8a1          84 LVNNAGIYPL-------------------IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL  144 (247)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS
T ss_pred             EEECCCCCCC-------------------CChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc
Confidence            9999998532                   235667889999999999999999999999999999999999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       145 ~~~~~~~Y~asKa  157 (247)
T d2ew8a1         145 KIEAYTHYISTKA  157 (247)
T ss_dssp             CCSSCHHHHHHHH
T ss_pred             cCcccccchhhhc
Confidence            9999999999985

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.6e-36  Score=221.10  Aligned_cols=153  Identities=28%  Similarity=0.292  Sum_probs=128.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc-CCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF-GKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.++ ++..+.+|++|+++++++++++.+++ |++|
T Consensus        10 ~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id   88 (259)
T d1xq1a_          10 TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSMFGGKLD   88 (259)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHHHHHHHHhCCCcc
Confidence            589999999999999999999999999999999999999999887664 59999999999999999999999998 6899


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||...+.                   ++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||++||..+.
T Consensus        89 ilvnnAG~~~~~-------------------~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~  149 (259)
T d1xq1a_          89 ILINNLGAIRSK-------------------PTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV  149 (259)
T ss_dssp             EEEEECCC-------------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----
T ss_pred             cccccccccCCC-------------------chhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccc
Confidence            999999986532                   3456788999999999999999999999999999989999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++...|+++|+
T Consensus       150 ~~~~~~~~Y~asKa  163 (259)
T d1xq1a_         150 VSASVGSIYSATKG  163 (259)
T ss_dssp             -----CCHHHHHHH
T ss_pred             cccccccccccccc
Confidence            99999999999985

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.2e-35  Score=217.94  Aligned_cols=147  Identities=24%  Similarity=0.262  Sum_probs=131.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+. .+..+++      +..++++|++|+++++++++++.+++|+||+
T Consensus         7 ~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~-~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   79 (248)
T d2d1ya1           7 GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI------GGAFFQVDLEDERERVRFVEEAAYALGRVDV   79 (248)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH------TCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHc------CCeEEEEeCCCHHHHHHHHHHHHHhcCCCCe
Confidence            58999999999999999999999999999998653 3444443      2467899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+..+                   .++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||++||..+..
T Consensus        80 LVnnAG~~~~-------------------~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~  140 (248)
T d2d1ya1          80 LVNNAAIAAP-------------------GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF  140 (248)
T ss_dssp             EEECCCCCCC-------------------BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS
T ss_pred             EEEeCcCCCC-------------------CChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc
Confidence            9999998543                   234567889999999999999999999999999999999999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       141 ~~~~~~~Y~asKa  153 (248)
T d2d1ya1         141 AEQENAAYNASKG  153 (248)
T ss_dssp             BCTTBHHHHHHHH
T ss_pred             cccccchhHHHHH
Confidence            9999999999985

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.4e-35  Score=219.09  Aligned_cols=153  Identities=22%  Similarity=0.233  Sum_probs=136.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh-HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK-RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+ .+++..+++++.+. ++..+++|++|+++++++++++.+++|+||
T Consensus         9 ~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iD   87 (261)
T d1geea_           9 VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIKEFGKLD   87 (261)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999854 46667777776654 588999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCC-eEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLP-RIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g-~iv~isS~~~  158 (174)
                      ++|||||+..+                   .++.+.+.++|++.|++|+.++++++|+++|+|++++.| +||++||..+
T Consensus        88 iLVnnAG~~~~-------------------~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~  148 (261)
T d1geea_          88 VMINNAGLENP-------------------VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE  148 (261)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGG
T ss_pred             EeeccceecCC-------------------cchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchh
Confidence            99999998543                   234567889999999999999999999999999887754 5999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|+...|+++|+
T Consensus       149 ~~~~~~~~~Y~asKa  163 (261)
T d1geea_         149 KIPWPLFVHYAASKG  163 (261)
T ss_dssp             TSCCTTCHHHHHHHH
T ss_pred             cccCccccccccCCc
Confidence            999999999999985

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.7e-35  Score=217.83  Aligned_cols=149  Identities=25%  Similarity=0.298  Sum_probs=134.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.    .+..++++|++|+++++++++++.+++|++|+
T Consensus         8 ~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           8 VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----ERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC----TTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----CCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            58999999999999999999999999999999887777777662    45888999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+..+.                   ++.+.+.++|++.|++|+.++++++|+++|+|++++ |+||++||+.+..
T Consensus        84 lVnnAG~~~~~-------------------~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~  143 (253)
T d1hxha_          84 LVNNAGILLPG-------------------DMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWL  143 (253)
T ss_dssp             EEECCCCCCCB-------------------CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTS
T ss_pred             EEecccccCCC-------------------CcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-Cceecccchhhhc
Confidence            99999985432                   345678899999999999999999999999998665 9999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+..+|+++|+
T Consensus       144 ~~~~~~~Y~asKa  156 (253)
T d1hxha_         144 PIEQYAGYSASKA  156 (253)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             CccccccccchhH
Confidence            9999999999985

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-35  Score=217.86  Aligned_cols=149  Identities=26%  Similarity=0.361  Sum_probs=132.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+++.+++..+++     .+..++.+|++|+++++++++++.+++|+||+
T Consensus         8 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~-----~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           8 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----PGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----CCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5899999999999999999999999999999987766665554     24788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....                  ..+.+++.++|++.|++|+.++++++|+++|+|++++ |+||++||..+..
T Consensus        83 lVnnAG~~~~~------------------~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~  143 (250)
T d1ydea1          83 VVNNAGHHPPP------------------QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAI  143 (250)
T ss_dssp             EEECCCCCCCC------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHH
T ss_pred             EEecccccccc------------------cccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccc
Confidence            99999974321                  1235678899999999999999999999999998765 9999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       144 ~~~~~~~Y~asKa  156 (250)
T d1ydea1         144 GQAQAVPYVATKG  156 (250)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             cccCcchhHHHHh
Confidence            9999999999985

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=5.1e-35  Score=215.64  Aligned_cols=150  Identities=25%  Similarity=0.341  Sum_probs=134.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++    +.++..+.+|++|+++++++++++.+++|+||+
T Consensus         7 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_           7 TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI----GPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            5899999999999999999999999999999988877777766    245889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccC-CCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQL-SDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~iv~isS~~~~  159 (174)
                      +|||||+..+                   .++.+.+.++|++.|++|+.|+++++|+++|.|.+ ++.|+||++||..+.
T Consensus        83 lVnnAg~~~~-------------------~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  143 (256)
T d1k2wa_          83 LVNNAALFDL-------------------APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGR  143 (256)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             EEeecccccc-------------------cccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhc
Confidence            9999998543                   23456788999999999999999999999997544 457999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+++|+
T Consensus       144 ~~~~~~~~Y~asKa  157 (256)
T d1k2wa_         144 RGEALVGVYCATKA  157 (256)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             cccccccchhhhhh
Confidence            99999999999985

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=7.1e-35  Score=216.22  Aligned_cols=154  Identities=19%  Similarity=0.264  Sum_probs=136.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+  ++.++.+|++|+++++++++++.+++|++|+
T Consensus         8 valITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   85 (268)
T d2bgka1           8 VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--VISFVHCDVTKDEDVRNLVDTTIAKHGKLDI   85 (268)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT--TEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC--ceEEEEccCCCHHHHHHHHHHHHHHcCCcce
Confidence            58999999999999999999999999999999988888888886533  4788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||.....+                 ....+.+.++|+++|++|+.++++++|+++|+|++++.|+||++||..+..
T Consensus        86 lVnnAG~~~~~~-----------------~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~  148 (268)
T d2bgka1          86 MFGNVGVLSTTP-----------------YSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT  148 (268)
T ss_dssp             EEECCCCCCSSC-----------------SSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC
T ss_pred             eccccccccCCC-----------------cccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccc
Confidence            999999854321                 124566889999999999999999999999999999999999999999988


Q ss_pred             cCCCC-cceeeecc
Q 035504          161 KNTWQ-GAICYLTF  173 (174)
Q Consensus       161 ~~~~~-~~y~~~k~  173 (174)
                      +.++. ..|+++|+
T Consensus       149 ~~~~~~~~Y~asKa  162 (268)
T d2bgka1         149 AGEGVSHVYTATKH  162 (268)
T ss_dssp             CCTTSCHHHHHHHH
T ss_pred             cccccccccchhHH
Confidence            76654 47898885

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.4e-34  Score=215.28  Aligned_cols=156  Identities=22%  Similarity=0.238  Sum_probs=139.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC--CceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.  .++..+.+|++|+++++++++++.+++|+|
T Consensus         6 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   85 (274)
T d1xhla_           6 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKI   85 (274)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Confidence            589999999999999999999999999999999888899999887653  368999999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||......                 ....+.+.++|++.|++|+.++++++|+++|.|++++.|+|+++||..+
T Consensus        86 DilVnnAG~~~~~~-----------------~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~  148 (274)
T d1xhla_          86 DILVNNAGANLADG-----------------TANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAG  148 (274)
T ss_dssp             CEEEECCCCCCCCS-----------------CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGS
T ss_pred             eEEEeecccccccc-----------------cccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhc
Confidence            99999999754321                 1234457788999999999999999999999999998899999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.++...|+++|+
T Consensus       149 ~~~~~~~~~Y~asKa  163 (274)
T d1xhla_         149 PQAHSGYPYYACAKA  163 (274)
T ss_dssp             SSCCTTSHHHHHHHH
T ss_pred             cccCCCCceehhhhh
Confidence            999999999999985

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.2e-34  Score=214.65  Aligned_cols=157  Identities=26%  Similarity=0.258  Sum_probs=130.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCC--ceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD--SVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+..  ++.++.+|++|+++++++++++.+++|+|
T Consensus         7 valVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   86 (264)
T d1spxa_           7 VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKL   86 (264)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999999998889999998876433  58999999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC-
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM-  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~-  157 (174)
                      |++|||||...+..               ......+.+.++|++.|++|+.++++++|+++|+|++++ |++|+++|.. 
T Consensus        87 DilvnnAG~~~~~~---------------~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~  150 (264)
T d1spxa_          87 DILVNNAGAAIPDS---------------QSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIAS  150 (264)
T ss_dssp             CEEEECCC----------------------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTS
T ss_pred             CEeecccccccCCc---------------cccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeecc
Confidence            99999999864321               112344568899999999999999999999999998776 6666666665 


Q ss_pred             CcccCCCCcceeeecc
Q 035504          158 GKLKNTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~~~~~~~y~~~k~  173 (174)
                      +..+.|+...|+++|+
T Consensus       151 ~~~~~~~~~~Y~asKa  166 (264)
T d1spxa_         151 GLHATPDFPYYSIAKA  166 (264)
T ss_dssp             SSSCCTTSHHHHHHHH
T ss_pred             ccccCCCchhhhhhhh
Confidence            5778999999999985

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-34  Score=211.21  Aligned_cols=154  Identities=23%  Similarity=0.252  Sum_probs=136.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..+++++++++.+. .++.+++||++|+++++++++++.+++|+||
T Consensus        12 v~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD   91 (257)
T d1xg5a_          12 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVD   91 (257)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            589999999999999999999999999999999889999999988754 4689999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC--CCeEEEEecCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD--LPRIVNVSSNM  157 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~iv~isS~~  157 (174)
                      ++|||||...+                   .++.+.+.++|++.+++|+.+++++++.++|.|++++  .|+||++||.+
T Consensus        92 ~lVnnAg~~~~-------------------~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~  152 (257)
T d1xg5a_          92 ICINNAGLARP-------------------DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMS  152 (257)
T ss_dssp             EEEECCCCCCC-------------------CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGG
T ss_pred             EEEecccccCC-------------------CccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechH
Confidence            99999998543                   2356678899999999999999999999999987754  69999999999


Q ss_pred             Cccc--CCCCcceeeecc
Q 035504          158 GKLK--NTWQGAICYLTF  173 (174)
Q Consensus       158 ~~~~--~~~~~~y~~~k~  173 (174)
                      +...  .+....|+++|+
T Consensus       153 ~~~~~p~~~~~~Y~~sKa  170 (257)
T d1xg5a_         153 GHRVLPLSVTHFYSATKY  170 (257)
T ss_dssp             GTSCCSCGGGHHHHHHHH
T ss_pred             hcCCCCCcccHHHHHHHH
Confidence            8754  445566998885

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.4e-34  Score=213.74  Aligned_cols=158  Identities=23%  Similarity=0.183  Sum_probs=135.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC--CceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.  .++..+++|++|+++++++++++.+++|+|
T Consensus         7 ~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   86 (272)
T d1xkqa_           7 TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKI   86 (272)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            589999999999999999999999999999999988899888877643  358999999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||...+.+.               .....+.+.++|++.+++|+.++++++|+++|.|++++.+.|+++||.++
T Consensus        87 DilvnnAG~~~~~~~---------------~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~  151 (272)
T d1xkqa_          87 DVLVNNAGAAIPDAF---------------GTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAG  151 (272)
T ss_dssp             CEEEECCCCCCCCTT---------------CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGS
T ss_pred             eEEEeCCcccCcccc---------------cccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcc
Confidence            999999998654221               11234567888999999999999999999999998876444444444677


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|+...|+++|+
T Consensus       152 ~~~~~~~~~Y~asKa  166 (272)
T d1xkqa_         152 PQAQPDFLYYAIAKA  166 (272)
T ss_dssp             SSCCCSSHHHHHHHH
T ss_pred             ccCCCCcchhhhHHH
Confidence            889999999999985

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.9e-34  Score=209.23  Aligned_cols=147  Identities=27%  Similarity=0.197  Sum_probs=129.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++      +..++.+|++|+++++++++++.+++|+||+
T Consensus         7 ~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_           7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------GAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------TCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------CCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            5899999999999999999999999999999987776666544      3678899999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+..+                   .++.+.+.++|++.|++|+.++++++|+++|.|++++.++|+++|| .+..
T Consensus        81 lVnnAG~~~~-------------------~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~  140 (242)
T d1ulsa_          81 VVHYAGITRD-------------------NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYL  140 (242)
T ss_dssp             EEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGG
T ss_pred             EEECCccccc-------------------CchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-cccc
Confidence            9999998543                   2345678899999999999999999999999999998777777776 5677


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+..+|+++|+
T Consensus       141 ~~~~~~~Y~asKa  153 (242)
T d1ulsa_         141 GNLGQANYAASMA  153 (242)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCCcchHHHHH
Confidence            8899999999985

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.4e-34  Score=210.87  Aligned_cols=142  Identities=24%  Similarity=0.278  Sum_probs=122.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.            ..++..+++|++|+++++++++++.+++|++|+
T Consensus         9 ~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   76 (237)
T d1uzma1           9 SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   76 (237)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC------------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch------------hcCceEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            58999999999999999999999999999998643            134788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||+..+                   .++.+.+.++|+++|++|+.++++++|.++|.|++++.|+||++||..+..
T Consensus        77 LVnnAG~~~~-------------------~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~  137 (237)
T d1uzma1          77 LVSNAGLSAD-------------------AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW  137 (237)
T ss_dssp             EEEECSCCC------------------------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--
T ss_pred             EEeeeccccc-------------------ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc
Confidence            9999998543                   234566889999999999999999999999999999999999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++..+|+++|+
T Consensus       138 ~~~~~~~Y~asKa  150 (237)
T d1uzma1         138 GIGNQANYAASKA  150 (237)
T ss_dssp             ---CCHHHHHHHH
T ss_pred             CCcccHHHHHHHH
Confidence            9999999999985

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=8.7e-34  Score=209.14  Aligned_cols=153  Identities=29%  Similarity=0.292  Sum_probs=140.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc-CCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF-GKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+++++++..+++++.+. .+.++.+|++++++++++++++.+++ +.+|
T Consensus         8 ~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id   86 (258)
T d1ae1a_           8 TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFDGKLN   86 (258)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence            589999999999999999999999999999999888888888877664 48889999999999999999999999 5899


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||....                   ..+.+.+.++|++++++|+.++++++|+++|.|++++.|+||++||..+.
T Consensus        87 ilinnag~~~~-------------------~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~  147 (258)
T d1ae1a_          87 ILVNNAGVVIH-------------------KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGF  147 (258)
T ss_dssp             EEEECCCCCCC-------------------CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGT
T ss_pred             EEecccccccc-------------------CccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccc
Confidence            99999998543                   23456788999999999999999999999999999999999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|....|+.+|+
T Consensus       148 ~~~~~~~~Y~~sK~  161 (258)
T d1ae1a_         148 SALPSVSLYSASKG  161 (258)
T ss_dssp             SCCTTCHHHHHHHH
T ss_pred             cccccchhHHHHHH
Confidence            99999999999884

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-34  Score=215.82  Aligned_cols=151  Identities=43%  Similarity=0.584  Sum_probs=133.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++ |++|++++|+.+.+++..+++++.++ ++.++.+|++|.++++++++++.+++|+||
T Consensus         5 VAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           5 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             EEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            4799999999999999999986 89999999999999999999988765 489999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||||||+..+..                   ..+.+.++|++.|++|+.|++++++.++|+|+++  |+||++||+.+.
T Consensus        84 iLVnNAGi~~~~~-------------------~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--g~ivnisS~~~~  142 (275)
T d1wmaa1          84 VLVNNAGIAFKVA-------------------DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSV  142 (275)
T ss_dssp             EEEECCCCCCCTT-------------------CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHH
T ss_pred             EEEEcCCcCCCCC-------------------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCccccccccee
Confidence            9999999865421                   2344667899999999999999999999999754  899999999998


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.+....|+.+|+
T Consensus       143 ~~~~~~~~y~~~k~  156 (275)
T d1wmaa1         143 RALKSCSPELQQKF  156 (275)
T ss_dssp             HHHHTSCHHHHHHH
T ss_pred             ccccccchhhhhhh
Confidence            88888777776653

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=2.4e-34  Score=211.59  Aligned_cols=148  Identities=16%  Similarity=0.081  Sum_probs=129.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      |+|||||++|||+++|++|+++|++|++++|+.+..++... +...      +..+|++|+++++++++++.++||+||+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~-~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET------YPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH------CTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-hhCc------EEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999998776555433 3222      2368999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ||||||.....                  .++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||++||..+..
T Consensus        75 LVnNAg~~~~~------------------~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~  136 (252)
T d1zmta1          75 LVSNDIFAPEF------------------QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG  136 (252)
T ss_dssp             EEEECCCCCCC------------------CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS
T ss_pred             EEECCcCCCCC------------------CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccc
Confidence            99999975321                  235567889999999999999999999999999999999999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.++...|+++|+
T Consensus       137 ~~~~~~~Y~asKa  149 (252)
T d1zmta1         137 PWKELSTYTSARA  149 (252)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             ccccccccccccc
Confidence            9999999999985

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-33  Score=208.38  Aligned_cols=157  Identities=23%  Similarity=0.177  Sum_probs=138.3

Q ss_pred             CEEEecCCCchhHHHHHHHHH---CCCeEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhh--
Q 035504            1 YAVVTGANKGIGYETVRQLAS---NGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQ--   74 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~---~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~--   74 (174)
                      ++|||||++|||+++|++|++   +|++|++++|+.+.++++.+++...++ .++.++++|++|+++++++++++.+.  
T Consensus         8 valITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~   87 (259)
T d1oaaa_           8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPR   87 (259)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhh
Confidence            589999999999999999986   799999999999999999999987654 36899999999999999999998773  


Q ss_pred             --cCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC--CCeE
Q 035504           75 --FGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD--LPRI  150 (174)
Q Consensus        75 --~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~--~g~i  150 (174)
                        ++.+|++|||||...+.+                ...+.+.+.++|+++|++|+.++++++|+++|+|++++  .|+|
T Consensus        88 ~~~~~~~~lvnnag~~~~~~----------------~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~I  151 (259)
T d1oaaa_          88 PEGLQRLLLINNAATLGDVS----------------KGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTV  151 (259)
T ss_dssp             CTTCCEEEEEECCCCCCCCS----------------SCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEE
T ss_pred             hccCceEEEEecccccccCC----------------CCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccc
Confidence              468999999999865322                23355678899999999999999999999999999876  5799


Q ss_pred             EEEecCCCcccCCCCcceeeecc
Q 035504          151 VNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       151 v~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      |++||..+..+.|+...|+++|+
T Consensus       152 v~isS~~~~~~~~~~~~Y~asKa  174 (259)
T d1oaaa_         152 VNISSLCALQPYKGWGLYCAGKA  174 (259)
T ss_dssp             EEECCGGGTSCCTTCHHHHHHHH
T ss_pred             cccccccccCCCccchHHHHHHH
Confidence            99999999999999999999985

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-34  Score=209.45  Aligned_cols=146  Identities=29%  Similarity=0.309  Sum_probs=131.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+.. +.++.++++|++|+++++++++++.+++|+||
T Consensus         5 valITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (254)
T d2gdza1           5 VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLD   84 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcC
Confidence            58999999999999999999999999999999998888888887653 44799999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC---CCeEEEEecC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD---LPRIVNVSSN  156 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~isS~  156 (174)
                      +||||||....                           ++|++++++|+.+++++++.++|+|++++   .|+||++||.
T Consensus        85 ilVnnAg~~~~---------------------------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~  137 (254)
T d2gdza1          85 ILVNNAGVNNE---------------------------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  137 (254)
T ss_dssp             EEEECCCCCCS---------------------------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             eeccccccccc---------------------------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence            99999998432                           12456799999999999999999998765   4789999999


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      .+..+.|+...|+++|+
T Consensus       138 ~~~~~~~~~~~Y~asKa  154 (254)
T d2gdza1         138 AGLMPVAQQPVYCASKH  154 (254)
T ss_dssp             GGTSCCTTCHHHHHHHH
T ss_pred             hhccCCCCccchHHHHH
Confidence            99999999999999985

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.5e-33  Score=209.88  Aligned_cols=154  Identities=21%  Similarity=0.202  Sum_probs=133.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.    .++..+.+|++++++++++++++.+++|++|+
T Consensus         7 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_           7 AVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG----DNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----CCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            58999999999999999999999999999999877766665543    45899999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||+..+...              ......+.+.++|++.|++|+.++++++|+++|.|++++ |+||+++|..+..
T Consensus        83 lvnnAG~~~~~~~--------------~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~  147 (276)
T d1bdba_          83 LIPNAGIWDYSTA--------------LVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFY  147 (276)
T ss_dssp             EECCCCCCCTTCC--------------GGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTS
T ss_pred             ccccccccCCCCc--------------cccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhcc
Confidence            9999998654321              122334455677999999999999999999999998776 8999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       148 ~~~~~~~Y~asKa  160 (276)
T d1bdba_         148 PNGGGPLYTAAKH  160 (276)
T ss_dssp             TTSSCHHHHHHHH
T ss_pred             CCCCCchHHHHHH
Confidence            9999999999985

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.7e-34  Score=214.81  Aligned_cols=150  Identities=21%  Similarity=0.218  Sum_probs=131.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC---------hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD---------EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~---------~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      ++|||||++|||+++|++|+++|++|++++++         .+.+++..+++...    .....+|++|.++++++++++
T Consensus         9 valITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           9 VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR----GGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT----TCEEEEECCCGGGHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc----ccccccccchHHHHHHHHHHH
Confidence            58999999999999999999999999999764         33445555666543    445689999999999999999


Q ss_pred             HhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEE
Q 035504           72 RSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIV  151 (174)
Q Consensus        72 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv  151 (174)
                      .+++|+||+||||||+..+                   .++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||
T Consensus        85 ~~~~G~iDiLVnNAGi~~~-------------------~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV  145 (302)
T d1gz6a_          85 LDTFGRIDVVVNNAGILRD-------------------RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRII  145 (302)
T ss_dssp             HHHTSCCCEEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             HHHcCCCCEEEECCccCCC-------------------CChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEE
Confidence            9999999999999998543                   235677889999999999999999999999999999899999


Q ss_pred             EEecCCCcccCCCCcceeeecc
Q 035504          152 NVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       152 ~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      ++||..+..+.+++..|+++|+
T Consensus       146 ~isS~~~~~~~~~~~~Y~asKa  167 (302)
T d1gz6a_         146 MTASASGIYGNFGQANYSAAKL  167 (302)
T ss_dssp             EECCHHHHHCCTTCHHHHHHHH
T ss_pred             EeCChhhcCCCCCcHHHHHHHH
Confidence            9999999999999999999985

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-33  Score=209.18  Aligned_cols=153  Identities=24%  Similarity=0.226  Sum_probs=135.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc----CCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS----GFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.    .+.++..+.+|++|+++++++++++.+++|
T Consensus        14 valITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   93 (297)
T d1yxma1          14 VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFG   93 (297)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999999999999998888888888753    234689999999999999999999999999


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|+||||||....                   .++.+.+.++|++.|++|+.++++++|+++|.|++++.|+||++|| 
T Consensus        94 ~iDiLVnnAg~~~~-------------------~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-  153 (297)
T d1yxma1          94 KINFLVNNGGGQFL-------------------SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-  153 (297)
T ss_dssp             CCCEEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-
T ss_pred             CeEEEEeecccccc-------------------CchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-
Confidence            99999999997543                   2356678899999999999999999999999999999899998865 


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      ++..+.|+...|+++|+
T Consensus       154 ~~~~~~~~~~~Y~asKa  170 (297)
T d1yxma1         154 PTKAGFPLAVHSGAARA  170 (297)
T ss_dssp             CCTTCCTTCHHHHHHHH
T ss_pred             cccccccccccchhHHH
Confidence            55567888999998885

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=8.6e-33  Score=204.10  Aligned_cols=154  Identities=22%  Similarity=0.196  Sum_probs=132.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+...+..+++.+..+.++..+++|++|+++++++++++.+++|++|+
T Consensus        11 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   90 (260)
T d1h5qa_          11 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   90 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcE
Confidence            58999999999999999999999999999999888888888887665567999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhcc-CCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQ-LSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~-~~~~g~iv~isS~~~~  159 (174)
                      +|||||...+                   .++.+.+.++|++.+++|+.++++++|.++|+|. +...|+|++++|....
T Consensus        91 lVnnAg~~~~-------------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~  151 (260)
T d1h5qa_          91 LIANAGVSVV-------------------KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQ  151 (260)
T ss_dssp             EEECCCCCCC-------------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             eccccccccc-------------------CCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccc
Confidence            9999998543                   2355678899999999999999999999999985 4456778888776654


Q ss_pred             c-------cCCCCcceeeecc
Q 035504          160 L-------KNTWQGAICYLTF  173 (174)
Q Consensus       160 ~-------~~~~~~~y~~~k~  173 (174)
                      .       +.++...|+++|+
T Consensus       152 ~~~~~~~~~~~~~~~Y~asKa  172 (260)
T d1h5qa_         152 IINQSSLNGSLTQVFYNSSKA  172 (260)
T ss_dssp             SCCEEETTEECSCHHHHHHHH
T ss_pred             cccccccccCccccchhhhhh
Confidence            4       3356788998885

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.5e-32  Score=200.93  Aligned_cols=145  Identities=26%  Similarity=0.260  Sum_probs=126.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.     .+..+.+|++|++++++++    +++|+||+
T Consensus         9 ~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~----~~~g~iDi   79 (244)
T d1pr9a_           9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERAL----GSVGPVDL   79 (244)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHH----TTCCCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-----CCeEEEEeCCCHHHHHHHH----HHhCCceE
Confidence            58999999999999999999999999999999887777666553     3788899999999987655    57899999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhh-ccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPL-LQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-m~~~~~g~iv~isS~~~~  159 (174)
                      ||||||...+                   .++.+.+.++|++.|++|+.++++++|.++|. |++++.|+||++||..+.
T Consensus        80 lVnnAg~~~~-------------------~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~  140 (244)
T d1pr9a_          80 LVNNAAVALL-------------------QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ  140 (244)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             EEeccccccc-------------------cchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccc
Confidence            9999998543                   23566788999999999999999999999996 455667999999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+++|+
T Consensus       141 ~~~~~~~~Y~asKa  154 (244)
T d1pr9a_         141 RAVTNHSVYCSTKG  154 (244)
T ss_dssp             SCCTTBHHHHHHHH
T ss_pred             ccccchhhhhhhHH
Confidence            99999999999985

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=4e-33  Score=208.31  Aligned_cols=151  Identities=25%  Similarity=0.314  Sum_probs=126.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEE---eeChhHH---HHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLT---ARDEKRG---LEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQ   74 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~---~r~~~~~---~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   74 (174)
                      ++|||||++|||+++|++|+++|++++.+   .|+.+..   .+..+++...+ .++..+.+|++|+++++++++++.  
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~--   80 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPP-GSLETLQLDVRDSKSVAAARERVT--   80 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCT-TSEEEEECCTTCHHHHHHHHHTCT--
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccC-CceEEEeccccchHhhhhhhhhcc--
Confidence            47999999999999999999999985544   4443333   33344444443 469999999999999999998874  


Q ss_pred             cCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEe
Q 035504           75 FGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVS  154 (174)
Q Consensus        75 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~is  154 (174)
                      .|.+|++|||+|.....                   ...+.+.++|+++|++|+.|+++++|+++|+|++++.|+||++|
T Consensus        81 ~g~idilvnnag~~~~~-------------------~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~is  141 (285)
T d1jtva_          81 EGRVDVLVCNAGLGLLG-------------------PLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTG  141 (285)
T ss_dssp             TSCCSEEEECCCCCCCS-------------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             ccchhhhhhcccccccc-------------------cccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEe
Confidence            38999999999985432                   24556888999999999999999999999999999889999999


Q ss_pred             cCCCcccCCCCcceeeecc
Q 035504          155 SNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~~~~~~~~~~y~~~k~  173 (174)
                      |++|..+.|+...|+++|+
T Consensus       142 S~~g~~~~~~~~~Y~asKa  160 (285)
T d1jtva_         142 SVGGLMGLPFNDVYCASKF  160 (285)
T ss_dssp             EGGGTSCCTTCHHHHHHHH
T ss_pred             chhhcCCCCCchHHHHHHH
Confidence            9999999999999999996

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=2.3e-32  Score=199.77  Aligned_cols=145  Identities=24%  Similarity=0.234  Sum_probs=125.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.     ++..+.+|++|++++++++    +++|+||+
T Consensus         7 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~----~~~g~iDi   77 (242)
T d1cyda_           7 RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVCVDLGDWDATEKAL----GGIGPVDL   77 (242)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHH----TTCCCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-----CCeEEEEeCCCHHHHHHHH----HHcCCCeE
Confidence            58999999999999999999999999999999877766665542     4788999999999887654    57899999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhcc-CCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQ-LSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~-~~~~g~iv~isS~~~~  159 (174)
                      ||||||+..+                   .++.+.+.++|++.|++|+.++++++|.++|.|. ++..|+||++||..+.
T Consensus        78 lVnnAg~~~~-------------------~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~  138 (242)
T d1cyda_          78 LVNNAALVIM-------------------QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH  138 (242)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             EEECCccccc-------------------hhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcc
Confidence            9999998543                   2456778899999999999999999999999754 4556899999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.|+...|+++|+
T Consensus       139 ~~~~~~~~Y~asKa  152 (242)
T d1cyda_         139 VTFPNLITYSSTKG  152 (242)
T ss_dssp             SCCTTBHHHHHHHH
T ss_pred             ccCCccccccchHH
Confidence            99999999999985

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.98  E-value=1.6e-32  Score=201.94  Aligned_cols=146  Identities=19%  Similarity=0.181  Sum_probs=124.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecC-ChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA-DPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..+...+.....+..++.++.+|++ +.++++++++++.+++|+||
T Consensus         7 ~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iD   86 (254)
T d1sbya1           7 NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVD   86 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999999999998665444433333444457999999998 67789999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC---CCeEEEEecC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD---LPRIVNVSSN  156 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~---~g~iv~isS~  156 (174)
                      +||||||...                           .++|++++++|+.|++++++.++|.|.+++   .|+||++||.
T Consensus        87 ilvnnAG~~~---------------------------~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~  139 (254)
T d1sbya1          87 ILINGAGILD---------------------------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSV  139 (254)
T ss_dssp             EEEECCCCCC---------------------------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             EEEeCCCCCC---------------------------HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEech
Confidence            9999999632                           234567799999999999999999997763   5899999999


Q ss_pred             CCcccCCCCcceeeecc
Q 035504          157 MGKLKNTWQGAICYLTF  173 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~  173 (174)
                      .+..+.+++..|+++|+
T Consensus       140 ~~~~~~~~~~~Y~asKa  156 (254)
T d1sbya1         140 TGFNAIHQVPVYSASKA  156 (254)
T ss_dssp             GGTSCCTTSHHHHHHHH
T ss_pred             hhccCCCCCHHHHHHHH
Confidence            99999999999999985

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.5e-32  Score=200.27  Aligned_cols=153  Identities=26%  Similarity=0.276  Sum_probs=139.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+.....+.+|+++.+.+....+++.+.+|.+|+
T Consensus        16 ~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~   95 (269)
T d1xu9a_          16 KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDM   95 (269)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccc
Confidence            58999999999999999999999999999999999999988888777777999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      ++||||.....                   .+.+.+.+++++++++|+.+++++++.++|.|++. .|+||++||.++..
T Consensus        96 li~nag~~~~~-------------------~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~  155 (269)
T d1xu9a_          96 LILNHITNTSL-------------------NLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKV  155 (269)
T ss_dssp             EEECCCCCCCC-------------------CCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTS
T ss_pred             ccccccccccc-------------------ccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcC
Confidence            99999985432                   23456788999999999999999999999999755 49999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       156 ~~p~~~~Y~asKa  168 (269)
T d1xu9a_         156 AYPMVAAYSASKF  168 (269)
T ss_dssp             CCTTCHHHHHHHH
T ss_pred             CCCCchHHHHHHH
Confidence            9999999999996

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.97  E-value=2e-31  Score=195.47  Aligned_cols=153  Identities=22%  Similarity=0.252  Sum_probs=126.6

Q ss_pred             CEEEecCCCchhHHHHHHHH---HCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh--hc
Q 035504            1 YAVVTGANKGIGYETVRQLA---SNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS--QF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~---~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~--~~   75 (174)
                      ++|||||++|||+++|++|+   ++|++|++++|+.+.++++. ++.+.+ .++.++.+|++|+++++++++++.+  ++
T Consensus         4 tilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~-~~~~~~-~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           4 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNH-SNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHC-TTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             EEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHhcC-CcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            58999999999999999996   47999999999987766654 444444 3599999999999999999999854  68


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC----------
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS----------  145 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~----------  145 (174)
                      +++|+||||||+..+..                  ...+.+.+++++.+++|+.|++++++.++|+|+++          
T Consensus        82 ~~iDiLvnNAg~~~~~~------------------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~  143 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSA------------------RITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMG  143 (248)
T ss_dssp             GCCSEEEECCCCCCCCC------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSS
T ss_pred             CCcceEEeeccccccCc------------------ccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccc
Confidence            99999999999854321                  23456788899999999999999999999999764          


Q ss_pred             -CCCeEEEEecCCCccc---CCCCcceeeecc
Q 035504          146 -DLPRIVNVSSNMGKLK---NTWQGAICYLTF  173 (174)
Q Consensus       146 -~~g~iv~isS~~~~~~---~~~~~~y~~~k~  173 (174)
                       ..|++|+++|+.|.+.   .++..+|+++|+
T Consensus       144 ~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKa  175 (248)
T d1snya_         144 VGRAAIINMSSILGSIQGNTDGGMYAYRTSKS  175 (248)
T ss_dssp             TTTCEEEEECCGGGCSTTCCSCCCHHHHHHHH
T ss_pred             ccccccccccccccccCCCCCCChHHHHHHHH
Confidence             3689999999998764   344567998885

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.97  E-value=2.5e-31  Score=196.10  Aligned_cols=151  Identities=25%  Similarity=0.245  Sum_probs=129.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh-HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK-RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++++.+ ..++..+++++.++ ++..+.+|++|+++++++++++.+++|+||
T Consensus         8 ~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   86 (259)
T d1ja9a_           8 VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHFGGLD   86 (259)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCC-CceEecCCCCCHHHHHHHHHHHHHHcCCCc
Confidence            5899999999999999999999999998876544 45666777776664 589999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||||....                   .++.+.+.++|++.|++|+.++++++|.++|+|+++  |++++++|..+.
T Consensus        87 ilinnag~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~  145 (259)
T d1ja9a_          87 FVMSNSGMEVW-------------------CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAV  145 (259)
T ss_dssp             EEECCCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGT
T ss_pred             EEEeccccccc-------------------cccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--Cccccccccccc
Confidence            99999998543                   234567889999999999999999999999999765  677777777665


Q ss_pred             c-cCCCCcceeeecc
Q 035504          160 L-KNTWQGAICYLTF  173 (174)
Q Consensus       160 ~-~~~~~~~y~~~k~  173 (174)
                      . +.|++..|+++|+
T Consensus       146 ~~~~~~~~~Y~asK~  160 (259)
T d1ja9a_         146 MTGIPNHALYAGSKA  160 (259)
T ss_dssp             CCSCCSCHHHHHHHH
T ss_pred             ccCCCCchhHHHHHH
Confidence            5 7889999999985

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=6.1e-31  Score=193.68  Aligned_cols=154  Identities=19%  Similarity=0.195  Sum_probs=130.5

Q ss_pred             CEEEecCCC--chhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANK--GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++  |||+++|++|+++|++|++++|+++ ..+..+++....+ +..++++|++|+++++++++++.+++|+|
T Consensus        10 ~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~-~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (256)
T d1ulua_          10 KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKEAFGGL   87 (256)
T ss_dssp             EEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             EEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHH-HHHHHHHhhhccC-cccccccccCCHHHHHHHHHHHHHhcCCc
Confidence            589999976  9999999999999999999998854 3444444544443 47789999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||......               ......+.+.++|+..+++|+.+++.++|.++|.|++.  |+||++||..+
T Consensus        88 DilVnnag~~~~~~---------------~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--G~Iv~isS~~~  150 (256)
T d1ulua_          88 DYLVHAIAFAPREA---------------MEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--GGIVTLTYYAS  150 (256)
T ss_dssp             EEEEECCCCCCHHH---------------HSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEEECGGG
T ss_pred             eEEEeccccccccc---------------cccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC--CEEEEEeehHh
Confidence            99999999854321               11234567888999999999999999999999999754  89999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|+...|+++|+
T Consensus       151 ~~~~~~~~~Y~asKa  165 (256)
T d1ulua_         151 EKVVPKYNVMAIAKA  165 (256)
T ss_dssp             TSBCTTCHHHHHHHH
T ss_pred             cCCCCCchHHHHHHH
Confidence            999999999999985

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.97  E-value=1.8e-30  Score=189.54  Aligned_cols=147  Identities=25%  Similarity=0.216  Sum_probs=121.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++    +.++.++++|++++++++++++++.+++|++|+
T Consensus         7 ~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           7 TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----EAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----CSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            5899999999999999999999999999999987665554443    246889999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   .++.+.+.++|++.+++|+.+++.++|+++|+|+++  ++|+++||. +..
T Consensus        83 LinnAg~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss~-a~~  140 (241)
T d2a4ka1          83 VAHFAGVAHS-------------------ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGSV-AGL  140 (241)
T ss_dssp             EEEGGGGTTT-------------------TC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECCC-TTC
T ss_pred             eccccccccc-------------------cchhhhhccccccccccccccccccccccccccccc--cceeecccc-ccc
Confidence            9999998543                   234567888999999999999999999999999755  466555554 445


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.|+...|+++|+
T Consensus       141 ~~~~~~~Y~~sK~  153 (241)
T d2a4ka1         141 GAFGLAHYAAGKL  153 (241)
T ss_dssp             CHHHHHHHHHCSS
T ss_pred             cccCccccchhhH
Confidence            5578899999986

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.97  E-value=9.1e-30  Score=188.90  Aligned_cols=151  Identities=22%  Similarity=0.260  Sum_probs=130.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh-HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK-RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++++.+ .+++..+++.+.++ ++.++++|++|+++++++++++.+++|++|
T Consensus        20 ~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   98 (272)
T d1g0oa_          20 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKIFGKLD   98 (272)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCC-ceeeEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999988754 45666677777664 599999999999999999999999999999


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|||+|....                   .++.+.+.++|++.+++|+.+++.++|+++|+|+++  |++++++|..+.
T Consensus        99 ilV~nag~~~~-------------------~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~  157 (272)
T d1g0oa_          99 IVCSNSGVVSF-------------------GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQ  157 (272)
T ss_dssp             EEEECCCCCCC-------------------CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGT
T ss_pred             ccccccccchh-------------------hhhhhhhhhHHHHHhhhccceeeeeccccccccccc--cccccccccccc
Confidence            99999997543                   234567888899999999999999999999999765  788999988765


Q ss_pred             c-cCCCCcceeeecc
Q 035504          160 L-KNTWQGAICYLTF  173 (174)
Q Consensus       160 ~-~~~~~~~y~~~k~  173 (174)
                      . +.++...|+++|+
T Consensus       158 ~~~~~~~~~Y~asKa  172 (272)
T d1g0oa_         158 AKAVPKHAVYSGSKG  172 (272)
T ss_dssp             CSSCSSCHHHHHHHH
T ss_pred             cccccchhhHHHHHH
Confidence            5 5677788998884

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=4.2e-30  Score=186.85  Aligned_cols=138  Identities=20%  Similarity=0.149  Sum_probs=117.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++       .   ...++.+|+++.      ++++.+++|++|+
T Consensus         6 ~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~---~~~~~~~Dv~~~------~~~~~~~~g~iD~   69 (234)
T d1o5ia_           6 GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------S---GHRYVVCDLRKD------LDLLFEKVKEVDI   69 (234)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------T---CSEEEECCTTTC------HHHHHHHSCCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------c---CCcEEEcchHHH------HHHHHHHhCCCcE
Confidence            58999999999999999999999999999998654322       1   245678999864      3456678899999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||||....                   .++.+.+.++|++.|++|+.++++++|+++|.|++++.|+||+++|..+..
T Consensus        70 lVnnAG~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~  130 (234)
T d1o5ia_          70 LVLNAGGPKA-------------------GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS  130 (234)
T ss_dssp             EEECCCCCCC-------------------BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             EEecccccCC-------------------cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc
Confidence            9999997432                   234567889999999999999999999999999998889999999999999


Q ss_pred             cCCCCcceeeecc
Q 035504          161 KNTWQGAICYLTF  173 (174)
Q Consensus       161 ~~~~~~~y~~~k~  173 (174)
                      +.+....|+++|+
T Consensus       131 ~~~~~~~Y~asKa  143 (234)
T d1o5ia_         131 PIENLYTSNSARM  143 (234)
T ss_dssp             CCTTBHHHHHHHH
T ss_pred             cccccccchhHHH
Confidence            9999999998884

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=1.3e-29  Score=185.96  Aligned_cols=151  Identities=26%  Similarity=0.328  Sum_probs=123.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC-
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK-   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~-   77 (174)
                      ++|||||++|||+++|++|+++|+  +|++++|+.+.+++    +.+..+.++.++.+|++|+++++++++++.+.++. 
T Consensus         5 tilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~----l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE----LKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH----HHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHH----HHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            589999999999999999999996  68888998776554    34444557999999999999999999999998764 


Q ss_pred             -ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCC----------
Q 035504           78 -LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSD----------  146 (174)
Q Consensus        78 -id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~----------  146 (174)
                       ||+||||||+..+.                  ....+.+.+++++.|++|+.|++++++.++|+|++++          
T Consensus        81 ~idilinnAG~~~~~------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~  142 (250)
T d1yo6a1          81 GLSLLINNAGVLLSY------------------GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSV  142 (250)
T ss_dssp             CCCEEEECCCCCCCB------------------CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCT
T ss_pred             CeEEEEEcCcccCCC------------------CccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccc
Confidence             99999999986432                  1234567889999999999999999999999997642          


Q ss_pred             -CCeEEEEecCCCcccCCC-------Ccceeeecc
Q 035504          147 -LPRIVNVSSNMGKLKNTW-------QGAICYLTF  173 (174)
Q Consensus       147 -~g~iv~isS~~~~~~~~~-------~~~y~~~k~  173 (174)
                       .+++++++|..+....+.       ..+|+.||+
T Consensus       143 ~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKa  177 (250)
T d1yo6a1         143 SRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA  177 (250)
T ss_dssp             TTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHH
T ss_pred             eeccccccccccccccCCcccccchhHHHHHHHHH
Confidence             478999998876654332       235888875

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.95  E-value=2.1e-28  Score=182.19  Aligned_cols=165  Identities=18%  Similarity=0.108  Sum_probs=127.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh-hHHHHHHHHHhhcCCCceeEE-----------------EeecCChh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE-KRGLEAVEKLKHSGFDSVIFH-----------------QLDVADPA   62 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~-----------------~~Dv~~~~   62 (174)
                      ++|||||++|||+++|++|+++|++|++++++. +..++..+++.+.++.....+                 .+|+++++
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            589999999999999999999999999988754 456667777877665555554                 45599999


Q ss_pred             hHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCccccccc---ccCHHHHHHhhHhhhhhHHHHHHhhh
Q 035504           63 TIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIV---TPTYELAEKCLRTNYYGSKRMCEVLI  139 (174)
Q Consensus        63 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~  139 (174)
                      +++++++++.+++|+||+||||||...+.+        +.+.+.++|....   +.....+...|.+|+.++++++|...
T Consensus        84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  155 (284)
T d1e7wa_          84 RCAELVAACYTHWGRCDVLVNNASSFYPTP--------LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  155 (284)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCC--------CCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCEEEecCCccCCCc--------hhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeecccc
Confidence            999999999999999999999999865433        4445555554332   23345567789999999999999876


Q ss_pred             hh------ccCCCCCeEEEEecCCCcccCCCCcceeeecc
Q 035504          140 PL------LQLSDLPRIVNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       140 ~~------m~~~~~g~iv~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      +.      |.+...++|++++|..+..+.+++..|+++|+
T Consensus       156 ~~~~~~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKa  195 (284)
T d1e7wa_         156 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKG  195 (284)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHH
T ss_pred             chhhhhHHHhcCCCCcccccccccccCCccceeeeccccc
Confidence            64      45556789999999999999999999999985

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3e-28  Score=178.32  Aligned_cols=156  Identities=23%  Similarity=0.275  Sum_probs=135.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.    .+.....+|+.+.++++....++...++.+|.
T Consensus         7 valITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1           7 VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC----CCcccccccccccccccccccccccccccccc
Confidence            58999999999999999999999999999999888777777663    35788999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC------CCCeEEEEe
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS------DLPRIVNVS  154 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~------~~g~iv~is  154 (174)
                      +++|+++.....             .....+..+.+.++|++++++|+.++++++|+++|+|..+      +.|+||++|
T Consensus        83 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~is  149 (248)
T d2o23a1          83 AVNCAGIAVASK-------------TYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTA  149 (248)
T ss_dssp             EEECCCCCCCCC-------------SEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEEC
T ss_pred             cccccccccCCC-------------cccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEec
Confidence            999998855332             1223445667889999999999999999999999987554      568999999


Q ss_pred             cCCCcccCCCCcceeeecc
Q 035504          155 SNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~~~~~~~~~~y~~~k~  173 (174)
                      |+.+..+.|+...|+++|+
T Consensus       150 S~~~~~~~~~~~~Y~asKa  168 (248)
T d2o23a1         150 SVAAFEGQVGQAAYSASKG  168 (248)
T ss_dssp             CTHHHHCCTTCHHHHHHHH
T ss_pred             chhhccCCCCchHHHHHHH
Confidence            9999999999999999985

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.95  E-value=1.3e-28  Score=181.27  Aligned_cols=149  Identities=23%  Similarity=0.244  Sum_probs=126.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChh---HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEK---RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      |+|||||++|||+++|++|+++|+ +|++++|+..   ...+..+++.+.+ .++.++.+|++|+++++++++++.+. +
T Consensus        11 t~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g-~~v~~~~~Dv~d~~~~~~~~~~i~~~-~   88 (259)
T d2fr1a1          11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG-ARTTVAACDVTDRESVRELLGGIGDD-V   88 (259)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHTSCTT-S
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcc-ccccccccccchHHHHHHhhcccccc-c
Confidence            689999999999999999999999 5889998743   3556667776655 46999999999999999999988664 5


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ++|.+|||+|.....                   .+.+.+.++++..+++|+.+++++.+.+    ...+.++||++||+
T Consensus        89 ~i~~vv~~ag~~~~~-------------------~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~  145 (259)
T d2fr1a1          89 PLSAVFHAAATLDDG-------------------TVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSF  145 (259)
T ss_dssp             CEEEEEECCCCCCCC-------------------CGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEH
T ss_pred             ccccccccccccccc-------------------ccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecch
Confidence            899999999985432                   3456678889999999999999998865    55566899999999


Q ss_pred             CCcccCCCCcceeeeccC
Q 035504          157 MGKLKNTWQGAICYLTFL  174 (174)
Q Consensus       157 ~~~~~~~~~~~y~~~k~~  174 (174)
                      .+..+.+++..|+++|+|
T Consensus       146 a~~~g~~~~~~YaAaka~  163 (259)
T d2fr1a1         146 ASAFGAPGLGGYAPGNAY  163 (259)
T ss_dssp             HHHTCCTTCTTTHHHHHH
T ss_pred             hhccCCcccHHHHHHHHh
Confidence            999999999999999974

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.95  E-value=4.1e-28  Score=181.69  Aligned_cols=154  Identities=16%  Similarity=0.110  Sum_probs=135.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+..++..+++.+..+.++.++.+|++|++++++++..+.++++++|+
T Consensus        27 ~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDi  106 (294)
T d1w6ua_          27 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNI  106 (294)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccch
Confidence            58999999999999999999999999999999988888888888776677999999999999999999999999999999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhcc-CCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQ-LSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~-~~~~g~iv~isS~~~~  159 (174)
                      +|||||....                   ....+.+.+++.+.+.+|..+.+.+.+...+.+. ....+.+++++|..+.
T Consensus       107 lvnnAg~~~~-------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~  167 (294)
T d1w6ua_         107 VINNAAGNFI-------------------SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE  167 (294)
T ss_dssp             EEECCCCCCC-------------------SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH
T ss_pred             hhhhhhhccc-------------------cccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhh
Confidence            9999998543                   2345567888899999999999999888776654 4556778999999999


Q ss_pred             ccCCCCcceeeecc
Q 035504          160 LKNTWQGAICYLTF  173 (174)
Q Consensus       160 ~~~~~~~~y~~~k~  173 (174)
                      .+.++..+|+.+|+
T Consensus       168 ~~~~~~~~YsasKa  181 (294)
T d1w6ua_         168 TGSGFVVPSASAKA  181 (294)
T ss_dssp             HCCTTCHHHHHHHH
T ss_pred             hcccccchHHHHHH
Confidence            99999999999885

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.6e-28  Score=179.50  Aligned_cols=144  Identities=19%  Similarity=0.200  Sum_probs=119.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|+.|+++|++|++++|+++.+++    +.+..  .+....+|+.+++.++    +..+.++++|+
T Consensus         8 ~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~----~~~~~--~~~~~~~d~~~~~~~~----~~~~~~~~id~   77 (245)
T d2ag5a1           8 VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE----LEKYP--GIQTRVLDVTKKKQID----QFANEVERLDV   77 (245)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG----GGGST--TEEEEECCTTCHHHHH----HHHHHCSCCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHhcc--CCceeeeecccccccc----cccccccccee
Confidence            58999999999999999999999999999999765433    33322  3777888887766554    45567789999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|||+|...+.                   ++.+.+.++|++.+++|+.++++++|.++|.|.+++.|+||++||..+..
T Consensus        78 lVn~ag~~~~~-------------------~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~  138 (245)
T d2ag5a1          78 LFNVAGFVHHG-------------------TVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV  138 (245)
T ss_dssp             EEECCCCCCCB-------------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT
T ss_pred             EEecccccCCC-------------------ChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc
Confidence            99999985432                   24566889999999999999999999999999999999999999998864


Q ss_pred             -cCCCCcceeeecc
Q 035504          161 -KNTWQGAICYLTF  173 (174)
Q Consensus       161 -~~~~~~~y~~~k~  173 (174)
                       +.+....|+.+|+
T Consensus       139 ~~~~~~~~Y~~sKa  152 (245)
T d2ag5a1         139 KGVVNRCVYSTTKA  152 (245)
T ss_dssp             BCCTTBHHHHHHHH
T ss_pred             CCccchhHHHHHHH
Confidence             6788899999885

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.94  E-value=1.4e-27  Score=173.52  Aligned_cols=142  Identities=12%  Similarity=0.019  Sum_probs=116.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh--hcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS--QFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~--~~g~i   78 (174)
                      ++|||||++|||+++|++|+++|++|++++|+..+.           ........+|+.+.++.....+.+.+  ++++|
T Consensus         4 kVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           4 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-----------ccccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            479999999999999999999999999999986421           12244556777777777777766666  46899


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |+||||||......                  ...+...++|+.++++|+.++++++|.++|+|++.  |+||++||..+
T Consensus        73 D~linnAG~~~~~~------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~Iv~isS~~~  132 (235)
T d1ooea_          73 DGVFCVAGGWAGGS------------------ASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAA  132 (235)
T ss_dssp             EEEEECCCCCCCBC------------------TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGG
T ss_pred             eEEEECCccccccc------------------ccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--eEEEEeccHHh
Confidence            99999999754321                  12233567889999999999999999999999753  89999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|+...|+++|+
T Consensus       133 ~~~~~~~~~Y~asKa  147 (235)
T d1ooea_         133 MGPTPSMIGYGMAKA  147 (235)
T ss_dssp             GSCCTTBHHHHHHHH
T ss_pred             cCCcccccchHHHHH
Confidence            999999999999985

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.93  E-value=3.3e-26  Score=173.76  Aligned_cols=154  Identities=11%  Similarity=0.216  Sum_probs=120.2

Q ss_pred             CEEEec--CCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC-----------CceeEE-------------
Q 035504            1 YAVVTG--ANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-----------DSVIFH-------------   54 (174)
Q Consensus         1 ~~litG--a~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-----------~~~~~~-------------   54 (174)
                      ++||||  +++|||+++|+.|+++|++|++++++............+...           ......             
T Consensus         4 VAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (329)
T d1uh5a_           4 ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDID   83 (329)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCC
T ss_pred             EEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccc
Confidence            589999  558999999999999999999999876543333322211110           001222             


Q ss_pred             -------EeecCChhhHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhh
Q 035504           55 -------QLDVADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTN  127 (174)
Q Consensus        55 -------~~Dv~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n  127 (174)
                             .+|++++++++++++++.++||+||++|||+|...+.                 ..++.+.+.++|++.|++|
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~-----------------~~~~~~~~~~~~~~~~~vn  146 (329)
T d1uh5a_          84 EETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEV-----------------QKDLLNTSRKGYLDALSKS  146 (329)
T ss_dssp             HHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTT-----------------TSCGGGCCHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeecccccccccc-----------------CCChhhhhhhhhhhhcccc
Confidence                   3477789999999999999999999999999974321                 1245677889999999999


Q ss_pred             hhhHHHHHHhhhhhccCCCCCeEEEEecCCCcccCCC-Ccceeeecc
Q 035504          128 YYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKLKNTW-QGAICYLTF  173 (174)
Q Consensus       128 ~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-~~~y~~~k~  173 (174)
                      +++.+.++|+++|+|++  .|+||++||..+..+.|+ .+.|+.+|+
T Consensus       147 ~~~~~~~~k~~~~~m~~--~GsIv~iss~~~~~~~p~y~~~y~asKa  191 (329)
T d1uh5a_         147 SYSLISLCKYFVNIMKP--QSSIISLTYHASQKVVPGYGGGMSSAKA  191 (329)
T ss_dssp             THHHHHHHHHHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHH
T ss_pred             hhHHHHHHHHHHhhccc--ccccccceeehhcccccccchhhhhhhc
Confidence            99999999999999965  389999999999988776 567888874

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=1.2e-26  Score=168.64  Aligned_cols=142  Identities=9%  Similarity=0.016  Sum_probs=117.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC--Cc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG--KL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g--~i   78 (174)
                      ++|||||++|||+++|++|+++|++|++++++..+.           ........+|..+.++.+.+..++.+.++  ++
T Consensus         4 ~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           4 RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-----------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-----------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            589999999999999999999999999998865421           12355667888888888888888877654  79


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||||......                  ...+.+.++|+++|++|+.+++++++.++|+|++  .|+||++||.++
T Consensus        73 D~lInnAG~~~~~~------------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~  132 (236)
T d1dhra_          73 DAILCVAGGWAGGN------------------AKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAA  132 (236)
T ss_dssp             EEEEECCCCCCCBC------------------TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGG
T ss_pred             eEEEECCccccccc------------------chhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHH
Confidence            99999999643221                  1234467889999999999999999999999975  389999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|+...|+++|+
T Consensus       133 ~~~~~~~~~Y~asKa  147 (236)
T d1dhra_         133 LDGTPGMIGYGMAKG  147 (236)
T ss_dssp             GSCCTTBHHHHHHHH
T ss_pred             cCCccCCcccHHHHH
Confidence            999999999999985

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.93  E-value=2.9e-25  Score=163.49  Aligned_cols=165  Identities=19%  Similarity=0.185  Sum_probs=126.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCC----hhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVAD----PATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~----~~~i~~~~~~~~~~~   75 (174)
                      |+|||||++|||+++|++|+++|++|++++|+.+. .+++.+++....+.+.....+|+.+    ++.++++++++.+++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999998554 5667788888777778877776654    455667778888899


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC-----CCCeE
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS-----DLPRI  150 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-----~~g~i  150 (174)
                      |++|++|||||+..+..        +.+.....+....+.....+...+..|+.+++...+...+.|...     ..+.+
T Consensus        83 g~iDilvnnAG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTP--------LLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSV  154 (266)
T ss_dssp             SCCCEEEECCCCCCCCC--------SCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEE
T ss_pred             CCCCEEEECCccCCCCc--------ccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccc
Confidence            99999999999866433        233344445555566677788889999999999999888877553     34678


Q ss_pred             EEEecCCCcccCCCCcceeeecc
Q 035504          151 VNVSSNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       151 v~isS~~~~~~~~~~~~y~~~k~  173 (174)
                      ++++|..+..+.|++..|+++|+
T Consensus       155 ~~~~~~~~~~~~~~~~~Y~asKa  177 (266)
T d1mxha_         155 VNLCDAMTDLPLPGFCVYTMAKH  177 (266)
T ss_dssp             EEECCGGGGSCCTTCHHHHHHHH
T ss_pred             hhhhhccccccCcchhhhhhhHH
Confidence            89999999999999999999885

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=2.5e-23  Score=152.59  Aligned_cols=155  Identities=17%  Similarity=0.123  Sum_probs=127.7

Q ss_pred             CEEEecCCC--chhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANK--GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++  |||.++|+.|+++|++|++++|+++ ..+..+++....+ +......|+++..++...+.++.+.++++
T Consensus         7 ~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (258)
T d1qsga_           7 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGKVWPKF   84 (258)
T ss_dssp             EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT-THHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             EEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHhhcC-CcceeecccchHHHHHHHHHHhhhccccc
Confidence            589999998  8999999999999999999999854 3444455544443 37788999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||++......              ...........+.+...+.+|+.+.+.+++.+.|.|++.  ++|+++||..+
T Consensus        85 d~~v~~a~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Ii~iss~~~  148 (258)
T d1qsga_          85 DGFVHSIGFAPGDQ--------------LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--SALLTLSYLGA  148 (258)
T ss_dssp             EEEEECCCCCCGGG--------------GSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGG
T ss_pred             ceEEEeeccccccc--------------ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEecchhh
Confidence            99999998854321              011222345667788999999999999999999999643  68999999999


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.|....|+.+|+
T Consensus       149 ~~~~~~~~~Y~~sKa  163 (258)
T d1qsga_         149 ERAIPNYNVMGLAKA  163 (258)
T ss_dssp             TSBCTTTTHHHHHHH
T ss_pred             ccCCCCcHHHHHHHH
Confidence            999999999999985

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.89  E-value=3.1e-23  Score=154.86  Aligned_cols=154  Identities=15%  Similarity=0.200  Sum_probs=113.1

Q ss_pred             CEEEecCCC--chhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhc------C--CC--ce-eEEEee----------
Q 035504            1 YAVVTGANK--GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHS------G--FD--SV-IFHQLD----------   57 (174)
Q Consensus         1 ~~litGa~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~------~--~~--~~-~~~~~D----------   57 (174)
                      ++|||||++  |||+++|++|+++|++|++++|+..............      .  ..  .. ....+|          
T Consensus        10 ~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (297)
T d1d7oa_          10 RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVP   89 (297)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSC
T ss_pred             EEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccch
Confidence            589999875  9999999999999999999999765322222211110      0  00  01 222232          


Q ss_pred             ----------cCChhhHHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhh
Q 035504           58 ----------VADPATIHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTN  127 (174)
Q Consensus        58 ----------v~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n  127 (174)
                                .++..+++++++++.++||+||++|||||.....                 ..++.+.+.++|++.|++|
T Consensus        90 ~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~-----------------~~~~~~~~~~~~~~~~~vn  152 (297)
T d1d7oa_          90 EDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEV-----------------SKPLLETSRKGYLAAISAS  152 (297)
T ss_dssp             HHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTT-----------------TSCGGGCCHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhccHHHHHHHHHHHHHHhCCCccccccccccccc-----------------ccchhhhhcccccccccch
Confidence                      4667788999999999999999999999974321                 1245677889999999999


Q ss_pred             hhhHHHHHHhhhhhccCCCCCeEEEEecCCCc-ccCCCCcceeeecc
Q 035504          128 YYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK-LKNTWQGAICYLTF  173 (174)
Q Consensus       128 ~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~-~~~~~~~~y~~~k~  173 (174)
                      +.++++++++++|.|.++  |+++.+++..+. ...+....|+.+|.
T Consensus       153 ~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKa  197 (297)
T d1d7oa_         153 SYSFVSLLSHFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKA  197 (297)
T ss_dssp             THHHHHHHHHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHH
T ss_pred             hhhhhhhhhHHHHHhhcC--Ccceeeeehhhcccccccccceecccc
Confidence            999999999999999766  566666666554 34577788888874

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=2.7e-23  Score=150.78  Aligned_cols=144  Identities=18%  Similarity=0.100  Sum_probs=117.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|||||++|||+++|++|+++|++|++++|+.+.             .+....++|++++.....+..+..+... .+.
T Consensus         3 ~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~   68 (241)
T d1uaya_           3 SALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------------EDLIYVEGDVTREEDVRRAVARAQEEAP-LFA   68 (241)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------------SSSEEEECCTTCHHHHHHHHHHHHHHSC-EEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------------ccceEeeccccchhhhHHHHHhhhcccc-ccc
Confidence            58999999999999999999999999999998542             3477889999999999999888877665 455


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhh------ccCCCCCeEEEEe
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPL------LQLSDLPRIVNVS  154 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------m~~~~~g~iv~is  154 (174)
                      ++++++......               ..........+.+++.+++|+.+++.+++.+.+.      |.+++.|+||++|
T Consensus        69 ~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~is  133 (241)
T d1uaya_          69 VVSAAGVGLAEK---------------ILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTA  133 (241)
T ss_dssp             EEECCCCCCCCC---------------SBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEEC
T ss_pred             hhhhhhcccccc---------------ccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeec
Confidence            666666533211               1122344567888999999999999999999887      5666679999999


Q ss_pred             cCCCcccCCCCcceeeecc
Q 035504          155 SNMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       155 S~~~~~~~~~~~~y~~~k~  173 (174)
                      |..+..+.|+...|+++|+
T Consensus       134 S~~~~~~~~~~~~Y~asKa  152 (241)
T d1uaya_         134 SVAAFEGQIGQAAYAASKG  152 (241)
T ss_dssp             CTHHHHCCTTCHHHHHHHH
T ss_pred             chhhccCCCCchhhHHHHH
Confidence            9999999999999999985

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.87  E-value=5.8e-22  Score=145.90  Aligned_cols=153  Identities=18%  Similarity=0.201  Sum_probs=122.0

Q ss_pred             CEEEecC--CCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc---
Q 035504            1 YAVVTGA--NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF---   75 (174)
Q Consensus         1 ~~litGa--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~---   75 (174)
                      ++|||||  ++|||+++|++|+++|++|++++|+.++..   +++.+..+.+...+.+|++++++++.+++.+.+.+   
T Consensus         8 ~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~---~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~   84 (268)
T d2h7ma1           8 RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI---QRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   84 (268)
T ss_dssp             EEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHH---HHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHH---HHHHHHcCCceeeEeeecccccccccccchhhhccccC
Confidence            5899994  579999999999999999999999876433   33334444568889999999999999999887764   


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS  155 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS  155 (174)
                      +.+|++|||+|.....              .....++.+.+.+++.+.+.+|+.+.+...+...+.+..   +.+++++|
T Consensus        85 ~~ld~~i~~ag~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s  147 (268)
T d2h7ma1          85 NKLDGVVHSIGFMPQT--------------GMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMD  147 (268)
T ss_dssp             CCEEEEEECCCCCCGG--------------GSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEE
T ss_pred             CCcceeeecccccCcc--------------ccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---cccccccc
Confidence            6799999999975422              112344567788999999999999999999998877642   45667777


Q ss_pred             CCCcccCCCCcceeeecc
Q 035504          156 NMGKLKNTWQGAICYLTF  173 (174)
Q Consensus       156 ~~~~~~~~~~~~y~~~k~  173 (174)
                      .....+.|+...|+++|+
T Consensus       148 ~~~~~~~p~~~~y~~sK~  165 (268)
T d2h7ma1         148 FDPSRAMPAYNWMTVAKS  165 (268)
T ss_dssp             CCCSSCCTTTHHHHHHHH
T ss_pred             ccccccCcccchhhcccc
Confidence            777788899999998884

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.87  E-value=4.9e-22  Score=146.83  Aligned_cols=154  Identities=16%  Similarity=0.192  Sum_probs=116.8

Q ss_pred             CEEEecCCC--chhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANK--GIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||++  |||+++|++|+++|++|++++|++ +..+..+++.+.++. ..+..+|++++++++++++++.+.+|++
T Consensus         7 ~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~g~i   84 (274)
T d2pd4a1           7 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNS-PYVYELDVSKEEHFKSLYNSVKKDLGSL   84 (274)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHHTTC-CCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             EEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhhCCc-eeEeeecccchhhHHHHHHHHHHHcCCC
Confidence            589999764  999999999999999999999984 455666677666544 7789999999999999999999999999


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |++|||+|......               ......+...+.+...+.++..+...+.+...+.++  ..+.|+++|+...
T Consensus        85 d~lV~nag~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~~~~  147 (274)
T d2pd4a1          85 DFIVHSVAFAPKEA---------------LEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN--NGASVLTLSYLGS  147 (274)
T ss_dssp             EEEEECCCCCCGGG---------------GSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGG
T ss_pred             CeEEeecccccccc---------------cccccccccchhhhhhhccccccccccccccccccc--cCcceeeeccccc
Confidence            99999999854321               112223344566666677777777777777766543  2245666666666


Q ss_pred             cccCCCCcceeeecc
Q 035504          159 KLKNTWQGAICYLTF  173 (174)
Q Consensus       159 ~~~~~~~~~y~~~k~  173 (174)
                      ..+.+....|+.+|+
T Consensus       148 ~~~~~~~~~y~asK~  162 (274)
T d2pd4a1         148 TKYMAHYNVMGLAKA  162 (274)
T ss_dssp             TSBCTTCHHHHHHHH
T ss_pred             ccccccchhhhHHHH
Confidence            667778888888874

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.76  E-value=2.6e-20  Score=130.77  Aligned_cols=110  Identities=17%  Similarity=0.045  Sum_probs=89.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||++|||++++++|+++|++|++++|+.++.++..+++....  ++....+|++|.+++++++       +++|+
T Consensus        25 ~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~-------~~iDi   95 (191)
T d1luaa1          25 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETADDASRAEAV-------KGAHF   95 (191)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--TCCCEEEECCSHHHHHHHT-------TTCSE
T ss_pred             EEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc--chhhhhhhcccHHHHHHHh-------cCcCe
Confidence            58999999999999999999999999999999988888888877654  3567889999998887654       58999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLL  142 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m  142 (174)
                      ||||||...                       ...+.+.|+..+++|+.+.+++...+.+.+
T Consensus        96 lin~Ag~g~-----------------------~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~  134 (191)
T d1luaa1          96 VFTAGAIGL-----------------------ELLPQAAWQNESSIEIVADYNAQPPLGIGG  134 (191)
T ss_dssp             EEECCCTTC-----------------------CCBCHHHHHTCTTCCEEEECCCSSSCSBTT
T ss_pred             eeecCcccc-----------------------ccCCHHHHHhhhcceeehhHhhHHHHHHHh
Confidence            999998631                       123567777889999988887665554443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=5.5e-17  Score=122.61  Aligned_cols=127  Identities=18%  Similarity=0.193  Sum_probs=93.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .+|||||+|.||..++++|+++|++|++++|..................++.++++|++|.+.+.+++++.     ++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCE
Confidence            38999999999999999999999999999763221111122222222246999999999999999888765     6999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      |||+|+..+..                       .+.++....+++|+.|+.++++++    ++.+..++|++||..-.
T Consensus        77 ViHlAa~~~~~-----------------------~~~~~~~~~~~~Nv~gt~nlL~~~----~~~~v~~~i~~Ss~~vy  128 (338)
T d1udca_          77 VIHFAGLKAVG-----------------------ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVY  128 (338)
T ss_dssp             EEECCSCCCHH-----------------------HHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGG
T ss_pred             EEECCCccchh-----------------------hHHhCHHHHHHhHHHHHHHHHHHH----HHhCCCEEEecCcceEE
Confidence            99999864321                       122334466999999999999988    44455789999987644

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.66  E-value=9e-17  Score=121.77  Aligned_cols=127  Identities=21%  Similarity=0.266  Sum_probs=92.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +||||||+|.||..++++|+++|++|+++++......+...........++.++.+|++|.++++.++...     ++|+
T Consensus         3 ~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d~   77 (347)
T d1z45a2           3 IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KIDS   77 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCCE
Confidence            48999999999999999999999999998763222112222222222346899999999999999888754     7999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||+|+...+..                       ..+.-.....+|+.++.++.+++    ++.+..++|++||....
T Consensus        78 VihlAa~~~~~~-----------------------~~~~~~~~~~~N~~~t~~ll~~~----~~~~i~~~i~~SS~~vy  129 (347)
T d1z45a2          78 VIHFAGLKAVGE-----------------------STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVY  129 (347)
T ss_dssp             EEECCSCCCHHH-----------------------HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGG
T ss_pred             EEEccccccccc-----------------------cccCcccccccchhhhHHHHHHH----HhcccceEEeecceeee
Confidence            999998753210                       11222345889999999999998    44455689999996543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.66  E-value=9.7e-17  Score=116.83  Aligned_cols=111  Identities=22%  Similarity=0.299  Sum_probs=85.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc-CCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF-GKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-g~id   79 (174)
                      ++|||||++|||+++|++|+++|++|++++|+..+                  ..+|+.+++..+....++..+. +.+|
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            58999999999999999999999999999987542                  2578899888888776666554 5799


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEec
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSS  155 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS  155 (174)
                      .++||||+....                          +.+.....+|..+...+.+...+.+.+...+.+.++++
T Consensus        65 ~lv~~Ag~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (257)
T d1fjha_          65 GLVLCAGLGPQT--------------------------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISS  114 (257)
T ss_dssp             EEEECCCCCTTC--------------------------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred             EEEEcCCCCCcH--------------------------HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeee
Confidence            999999874321                          11344478899999888888888776665555555444

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=5.6e-16  Score=117.93  Aligned_cols=128  Identities=23%  Similarity=0.216  Sum_probs=89.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHH-HHHHHHh---hcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL-EAVEKLK---HSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~l~---~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||+|.||..++++|+++|++|++++|...... +..+.+.   .....++.++++|++|.+++++++.+.     
T Consensus         3 ~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   77 (357)
T d1db3a_           3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-----   77 (357)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-----
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc-----
Confidence            3789999999999999999999999999998543211 1111111   112236999999999999999999877     


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      .+|++||+|+..+...                       +.++....+++|+.|+.++++++... ...+..++|++||.
T Consensus        78 ~~d~v~h~aa~~~~~~-----------------------~~~~~~~~~~~Nv~gt~nllea~~~~-~~~~~~r~i~~SS~  133 (357)
T d1db3a_          78 QPDEVYNLGAMSHVAV-----------------------SFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTS  133 (357)
T ss_dssp             CCSEEEECCCCCTTTT-----------------------TTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEG
T ss_pred             CCCEEEEeecccccch-----------------------hhhCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEEEch
Confidence            7899999999865321                       11222345899999999999888433 11233589999985


Q ss_pred             C
Q 035504          157 M  157 (174)
Q Consensus       157 ~  157 (174)
                      .
T Consensus       134 ~  134 (357)
T d1db3a_         134 E  134 (357)
T ss_dssp             G
T ss_pred             h
Confidence            4

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.64  E-value=1.1e-15  Score=114.49  Aligned_cols=127  Identities=14%  Similarity=0.075  Sum_probs=93.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC-hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD-EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      .||||||+|.||..++++|+++|++|+++++- .....+....+...  .++.++.+|++|.+++.++++..     ++|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~--~~~~~i~~Di~~~~~l~~~~~~~-----~~d   74 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL--GNFEFVHGDIRNKNDVTRLITKY-----MPD   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhcc--CCcEEEEcccCCHHHHHHHHHhc-----CCc
Confidence            48999999999999999999999999998752 22223333333332  35899999999999999988866     789


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++||+|+.....                       ...++....+++|+.|+.++++++    .+.+..++++.||....
T Consensus        75 ~Vih~aa~~~~~-----------------------~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~i~~sS~~~~  127 (338)
T d1orra_          75 SCFHLAGQVAMT-----------------------TSIDNPCMDFEINVGGTLNLLEAV----RQYNSNCNIIYSSTNKV  127 (338)
T ss_dssp             EEEECCCCCCHH-----------------------HHHHCHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEEEEGGG
T ss_pred             eEEeeccccccc-----------------------ccccChHHHHHHHHHHHHHHHHhh----hcccccccccccccccc
Confidence            999999874321                       012233466899999999999887    44455666777776554


Q ss_pred             cc
Q 035504          160 LK  161 (174)
Q Consensus       160 ~~  161 (174)
                      .+
T Consensus       128 ~~  129 (338)
T d1orra_         128 YG  129 (338)
T ss_dssp             GT
T ss_pred             cc
Confidence            44

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=4.9e-15  Score=104.41  Aligned_cols=112  Identities=16%  Similarity=0.124  Sum_probs=84.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++||||+|+||.+++++|+++|++|.++.|+.++..       .....++.++.+|++|.+++.+++.       +.|+
T Consensus         5 kIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~-------~~~~~~~~~~~gD~~d~~~l~~al~-------~~d~   70 (205)
T d1hdoa_           5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-------SEGPRPAHVVVGDVLQAADVDKTVA-------GQDA   70 (205)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC-------SSSCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcc-------cccccccccccccccchhhHHHHhc-------CCCE
Confidence            4899999999999999999999999999999876522       2222458999999999999887766       7899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCcc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGKL  160 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (174)
                      +|+++|......                   .           .+++..+..++++++    ++++..++|++||.....
T Consensus        71 vi~~~g~~~~~~-------------------~-----------~~~~~~~~~~l~~aa----~~~~v~r~i~~ss~~~~~  116 (205)
T d1hdoa_          71 VIVLLGTRNDLS-------------------P-----------TTVMSEGARNIVAAM----KAHGVDKVVACTSAFLLW  116 (205)
T ss_dssp             EEECCCCTTCCS-------------------C-----------CCHHHHHHHHHHHHH----HHHTCCEEEEECCGGGTS
T ss_pred             EEEEeccCCchh-------------------h-----------hhhhHHHHHHHHHHH----HhcCCCeEEEEeeeeccC
Confidence            999998633211                   0           234555666665554    666778999999876543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.58  E-value=1.2e-14  Score=111.55  Aligned_cols=127  Identities=13%  Similarity=0.040  Sum_probs=91.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeCh----------------hHHHHHHHHHhhcCCCceeEEEeecCChhhH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDE----------------KRGLEAVEKLKHSGFDSVIFHQLDVADPATI   64 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~----------------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i   64 (174)
                      +||||||+|.||.+++++|+++|++|++++.-.                ....+.........+.++.++.+|++|.+.+
T Consensus         3 kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l   82 (393)
T d1i24a_           3 RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFL   82 (393)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHH
Confidence            489999999999999999999999999986211                1122233333333345699999999999999


Q ss_pred             HHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccC
Q 035504           65 HSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQL  144 (174)
Q Consensus        65 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~  144 (174)
                      +++++..     ++|+|||.|+......                    .....+.....+++|+.|+.+++.++    ++
T Consensus        83 ~~~~~~~-----~~d~ViHlAa~~~~~~--------------------s~~~~~~~~~~~~~Nv~gt~nll~~~----~~  133 (393)
T d1i24a_          83 AESFKSF-----EPDSVVHFGEQRSAPY--------------------SMIDRSRAVYTQHNNVIGTLNVLFAI----KE  133 (393)
T ss_dssp             HHHHHHH-----CCSEEEECCSCCCHHH--------------------HTSCHHHHHHHHHHHHHHHHHHHHHH----HH
T ss_pred             HHHHHhh-----cchheecccccccccc--------------------ccccccccccccccccccccHHHHHH----HH
Confidence            9999876     7999999998754321                    11123444566899999999999887    33


Q ss_pred             CCCC-eEEEEecC
Q 035504          145 SDLP-RIVNVSSN  156 (174)
Q Consensus       145 ~~~g-~iv~isS~  156 (174)
                      .+.. ++++.||.
T Consensus       134 ~~~~~~~i~~ss~  146 (393)
T d1i24a_         134 FGEECHLVKLGTM  146 (393)
T ss_dssp             HCTTCEEEEECCG
T ss_pred             hccccceeecccc
Confidence            3333 45555554

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1e-14  Score=110.11  Aligned_cols=127  Identities=20%  Similarity=0.232  Sum_probs=93.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC------hhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD------EKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQ   74 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~------~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   74 (174)
                      +||||||+|.||.+++++|+++|++|+.+++.      .....+..+.+......++.++++|++|.+.+++++...   
T Consensus         4 KILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   80 (346)
T d1ek6a_           4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY---   80 (346)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC---
T ss_pred             eEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc---
Confidence            48999999999999999999999999998641      111122233333333356999999999999998887654   


Q ss_pred             cCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEe
Q 035504           75 FGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVS  154 (174)
Q Consensus        75 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~is  154 (174)
                        .++.++|+|+..+..                       .+.++..+.+++|+.++.++.+++    ++.+..+++++|
T Consensus        81 --~~~~i~h~Aa~~~~~-----------------------~~~~~p~~~~~~Nv~gt~~l~~~~----~~~~v~~~i~~s  131 (346)
T d1ek6a_          81 --SFMAVIHFAGLKAVG-----------------------ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSS  131 (346)
T ss_dssp             --CEEEEEECCSCCCHH-----------------------HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEE
T ss_pred             --ccccccccccccCcH-----------------------hhHhCHHHHHHhhhcccccccchh----hhcCcccccccc
Confidence              788999999875421                       122233456899999999999887    555667899998


Q ss_pred             cCCCc
Q 035504          155 SNMGK  159 (174)
Q Consensus       155 S~~~~  159 (174)
                      |....
T Consensus       132 s~~~~  136 (346)
T d1ek6a_         132 SATVY  136 (346)
T ss_dssp             EGGGG
T ss_pred             cceee
Confidence            87543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.54  E-value=2.7e-15  Score=114.32  Aligned_cols=127  Identities=20%  Similarity=0.181  Sum_probs=89.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEE-EeeChhHHHHHHHHHhhc-CCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHS-GFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      .||||||+|.||..++++|+++|+++++ +++.... .. ...+... ...++.++.+|++|.+.++.+++..     .+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~-~~-~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA-GN-LESLSDISESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTT-CC-GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc-cc-HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CC
Confidence            4899999999999999999999998554 4432111 00 1112211 1236999999999999999888766     79


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCC-----CCCeEEEE
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLS-----DLPRIVNV  153 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-----~~g~iv~i  153 (174)
                      |+|||+|+..+...                       +.++....+++|+.|+.++.+.+...-...     +..++|++
T Consensus        75 d~VihlAa~~~~~~-----------------------~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~  131 (361)
T d1kewa_          75 DAVMHLAAESHVDR-----------------------SITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHI  131 (361)
T ss_dssp             SEEEECCSCCCHHH-----------------------HHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEE
T ss_pred             CEEEECccccchhh-----------------------HHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEe
Confidence            99999998643210                       112234568999999999999886643221     23689999


Q ss_pred             ecCC
Q 035504          154 SSNM  157 (174)
Q Consensus       154 sS~~  157 (174)
                      ||..
T Consensus       132 SS~~  135 (361)
T d1kewa_         132 STDE  135 (361)
T ss_dssp             EEGG
T ss_pred             ccce
Confidence            9965

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=4.7e-14  Score=106.27  Aligned_cols=127  Identities=17%  Similarity=0.105  Sum_probs=89.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-----HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-----GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +|||||+|.||..++++|+++|++|+.++|....     ..............++.++.+|++|.+.+.+++.+.     
T Consensus         4 ~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   78 (347)
T d1t2aa_           4 ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-----   78 (347)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc-----
Confidence            3999999999999999999999999999985421     111111122222246899999999999999999877     


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      .++.++|.++..+..                       ...+.....+++|+.|+.++..++...-. .+..++|++||.
T Consensus        79 ~~~~v~~~~a~~~~~-----------------------~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~  134 (347)
T d1t2aa_          79 KPTEIYNLGAQSHVK-----------------------ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTS  134 (347)
T ss_dssp             CCSEEEECCSCCCHH-----------------------HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEG
T ss_pred             ccceeeeeeeccccc-----------------------hhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecch
Confidence            788999999864321                       11222334579999999999988754422 223589999985


Q ss_pred             C
Q 035504          157 M  157 (174)
Q Consensus       157 ~  157 (174)
                      .
T Consensus       135 ~  135 (347)
T d1t2aa_         135 E  135 (347)
T ss_dssp             G
T ss_pred             h
Confidence            4

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.49  E-value=5.7e-14  Score=106.08  Aligned_cols=109  Identities=18%  Similarity=0.046  Sum_probs=84.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +||||||+|.||..+++.|+++|++|+.++|+........+....  ..++.++.+|++|.+.+.+++...     .+|+
T Consensus        10 kILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~--~~~i~~~~~Dl~d~~~l~~~~~~~-----~~~~   82 (356)
T d1rkxa_          10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV--ADGMQSEIGDIRDQNKLLESIREF-----QPEI   82 (356)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT--TTTSEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc--ccCCeEEEeeccChHhhhhhhhhc-----hhhh
Confidence            489999999999999999999999999999976544333333221  235999999999999999888766     7899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhh
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLI  139 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  139 (174)
                      ++|.|+.....                       .+.+.....+++|+.++.++++++.
T Consensus        83 v~~~aa~~~~~-----------------------~~~~~~~~~~~~Nv~g~~n~l~~~~  118 (356)
T d1rkxa_          83 VFHMAAQPLVR-----------------------LSYSEPVETYSTNVMGTVYLLEAIR  118 (356)
T ss_dssp             EEECCSCCCHH-----------------------HHHHCHHHHHHHHTHHHHHHHHHHH
T ss_pred             hhhhhcccccc-----------------------ccccCCccccccccccchhhhhhhh
Confidence            99999864321                       1223345568999999999998884

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.48  E-value=6.5e-14  Score=105.48  Aligned_cols=124  Identities=17%  Similarity=0.099  Sum_probs=88.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHH---HHHH-hhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEA---VEKL-KHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~---~~~l-~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++|||||+|.||..++++|.++|++|+.++|........   ...+ ......++.++..|..|.........       
T Consensus        18 ~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------   90 (341)
T d1sb8a_          18 VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-------   90 (341)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-------
T ss_pred             EEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc-------
Confidence            489999999999999999999999999998732211111   1111 11122358899999998887665443       


Q ss_pred             CccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           77 KLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        77 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      ..+.++|.++.....                       .+.++....+++|+.|+.++.+++    .+.+..++|++||.
T Consensus        91 ~~~~v~~~~a~~~~~-----------------------~~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~~~i~~SS~  143 (341)
T d1sb8a_          91 GVDYVLHQAALGSVP-----------------------RSINDPITSNATNIDGFLNMLIAA----RDAKVQSFTYAASS  143 (341)
T ss_dssp             TCSEEEECCSCCCHH-----------------------HHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEG
T ss_pred             ccccccccccccccc-----------------------ccccCccchhheeehhHHHHHHHH----HhcCCceEEEcccc
Confidence            778899888753321                       123444566999999999999988    44555699999997


Q ss_pred             CC
Q 035504          157 MG  158 (174)
Q Consensus       157 ~~  158 (174)
                      .-
T Consensus       144 ~v  145 (341)
T d1sb8a_         144 ST  145 (341)
T ss_dssp             GG
T ss_pred             ee
Confidence            64

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.48  E-value=1.9e-13  Score=103.06  Aligned_cols=123  Identities=17%  Similarity=0.108  Sum_probs=90.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCC-ceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +||||||+|.||..++++|+++|++|+.+.|+........+........ ....+..|++|.+++.+++.       .+|
T Consensus        13 ~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~~   85 (342)
T d1y1pa1          13 LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------GAA   85 (342)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------cch
Confidence            4899999999999999999999999999999876555444433333323 34557789999998877664       789


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      .++|+++.....                       .+   ....+++|+.|+.++++.+...   ....++|++||..+.
T Consensus        86 ~v~~~a~~~~~~-----------------------~~---~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~  136 (342)
T d1y1pa1          86 GVAHIASVVSFS-----------------------NK---YDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSA  136 (342)
T ss_dssp             EEEECCCCCSCC-----------------------SC---HHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGT
T ss_pred             hhhhhccccccc-----------------------cc---ccccccchhhhHHHHHHhhhcc---cccccccccccceee
Confidence            999999863211                       01   1234788999999999887422   235799999997654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.46  E-value=1.2e-13  Score=103.67  Aligned_cols=128  Identities=19%  Similarity=0.132  Sum_probs=87.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh-----HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK-----RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF   75 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   75 (174)
                      ++|||||+|.||..++++|+++|++|+.++|..+     ................+.+..+|+++.+++...++..    
T Consensus         3 ~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~----   78 (339)
T d1n7ha_           3 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI----   78 (339)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH----
T ss_pred             EEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh----
Confidence            4899999999999999999999999999998532     1111111111222235889999999999999888765    


Q ss_pred             CCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccC-CCCCeEEEEe
Q 035504           76 GKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQL-SDLPRIVNVS  154 (174)
Q Consensus        76 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~g~iv~is  154 (174)
                       ++|++||+|+.....                       .+.+.....++.|+.+...+..++...... ....++++.|
T Consensus        79 -~~D~Vih~Aa~~~~~-----------------------~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~s  134 (339)
T d1n7ha_          79 -KPDEVYNLAAQSHVA-----------------------VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAG  134 (339)
T ss_dssp             -CCSEEEECCSCCCHH-----------------------HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred             -ccchhhhcccccccc-----------------------ccccCccccccccccccchhhhhhhhcccccccceeeeecc
Confidence             899999999874421                       112333456899999999988887543222 2234555555


Q ss_pred             cC
Q 035504          155 SN  156 (174)
Q Consensus       155 S~  156 (174)
                      |.
T Consensus       135 s~  136 (339)
T d1n7ha_         135 SS  136 (339)
T ss_dssp             EG
T ss_pred             cc
Confidence            54

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.44  E-value=1.7e-13  Score=102.02  Aligned_cols=121  Identities=17%  Similarity=0.089  Sum_probs=86.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|.||..++++|+++|++|+.++|.... ..+..+.+...  .++.++.+|++|.+++.+.+...     ..+
T Consensus         2 ~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~-----~~~   74 (321)
T d1rpna_           2 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIE--GDIQYEDGDMADACSVQRAVIKA-----QPQ   74 (321)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCG--GGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhccc--CCcEEEEccccChHHhhhhhccc-----ccc
Confidence            48999999999999999999999999999986432 11223333222  25899999999999999888876     678


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCC-CeEEEEec
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDL-PRIVNVSS  155 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~-g~iv~isS  155 (174)
                      +++++++......                       ..+.....++.|+.|+.+++.++.    +.+. .++++.||
T Consensus        75 ~~~~~a~~~~~~~-----------------------~~~~~~~~~~~n~~g~~~~l~~~~----~~~~~~~~i~~Ss  124 (321)
T d1rpna_          75 EVYNLAAQSFVGA-----------------------SWNQPVTTGVVDGLGVTHLLEAIR----QFSPETRFYQAST  124 (321)
T ss_dssp             EEEECCSCCCHHH-----------------------HTTSHHHHHHHHTHHHHHHHHHHH----HHCTTSEEEEEEE
T ss_pred             ccccccccccccc-----------------------cccchHHHHhhhhhchHHHHHHHH----HhCCCcccccccc
Confidence            8888887643211                       111223558999999999988873    3332 35555555

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.38  E-value=1.9e-12  Score=91.89  Aligned_cols=132  Identities=18%  Similarity=0.107  Sum_probs=87.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe--EEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII--VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~--v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      +||||||+|+||.+++++|+++|++  |+...|+++....    +    ..++.++.+|+++.+++.++++       ++
T Consensus         5 tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~----~----~~~~~~~~~d~~~~~~~~~~~~-------~~   69 (252)
T d2q46a1           5 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I----GGEADVFIGDITDADSINPAFQ-------GI   69 (252)
T ss_dssp             EEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T----TCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh----c----cCCcEEEEeeeccccccccccc-------cc
Confidence            5899999999999999999999976  5555666543221    1    1358899999999998887765       78


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |.+||+++...........   ....       ..............+|+.++..+.......    ..+...+.|+...
T Consensus        70 d~vi~~a~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~  135 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDP---TKGG-------RPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGG  135 (252)
T ss_dssp             SEEEECCCCCCEECTTCCT---TSCC-------CCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTT
T ss_pred             eeeEEEEeeccccccccch---hhhh-------hcccccccchhhhccccccceeeccccccc----ccccccccccccc
Confidence            9999999876543211100   0000       001111112234688999988888776433    3477888888766


Q ss_pred             ccc
Q 035504          159 KLK  161 (174)
Q Consensus       159 ~~~  161 (174)
                      ..+
T Consensus       136 ~~~  138 (252)
T d2q46a1         136 TNP  138 (252)
T ss_dssp             TCT
T ss_pred             CCC
Confidence            554

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.2e-13  Score=99.01  Aligned_cols=126  Identities=15%  Similarity=0.059  Sum_probs=90.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|.||.+++++|+++|.  +|++++|++.....       ....++....+|+.+.+++..       .+.++
T Consensus        16 ~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-------~~~~~i~~~~~D~~~~~~~~~-------~~~~~   81 (232)
T d2bkaa1          16 SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------EAYKNVNQEVVDFEKLDDYAS-------AFQGH   81 (232)
T ss_dssp             EEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-------GGGGGCEEEECCGGGGGGGGG-------GGSSC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-------cccceeeeeeecccccccccc-------ccccc
Confidence            489999999999999999999995  89999997543111       011246777788877766544       34489


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |.+||++|....                          ........++|+.++..+++.+    ++.+..++|++|+...
T Consensus        82 d~vi~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~fi~~Ss~~~  131 (232)
T d2bkaa1          82 DVGFCCLGTTRG--------------------------KAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGA  131 (232)
T ss_dssp             SEEEECCCCCHH--------------------------HHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTC
T ss_pred             cccccccccccc--------------------------ccchhhhhhhcccccceeeecc----cccCccccccCCcccc
Confidence            999999986321                          1222344788999999999887    5566678999999876


Q ss_pred             cccCCCCcceeeec
Q 035504          159 KLKNTWQGAICYLT  172 (174)
Q Consensus       159 ~~~~~~~~~y~~~k  172 (174)
                      ...  ....|..+|
T Consensus       132 ~~~--~~~~Y~~~K  143 (232)
T d2bkaa1         132 DKS--SNFLYLQVK  143 (232)
T ss_dssp             CTT--CSSHHHHHH
T ss_pred             ccC--ccchhHHHH
Confidence            543  234566555

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=1e-12  Score=98.71  Aligned_cols=118  Identities=14%  Similarity=0.027  Sum_probs=84.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++|||||+|.||..++++|+++| ++|+.+++......+..    .  ..++.++.+|+++.+++.+...      .++|
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~----~--~~~~~~i~~Di~~~~~~~~~~~------~~~d   69 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----N--HPHFHFVEGDISIHSEWIEYHV------KKCD   69 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----T--CTTEEEEECCTTTCSHHHHHHH------HHCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc----c--CCCeEEEECccCChHHHHHHHH------hCCC
Confidence            48999999999999999999999 58988887644322211    1  2369999999998877655322      1589


Q ss_pred             EEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           80 ILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        80 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      ++||+|+......                       ..+.....+++|+.|+.++++++    .+.+ -++++.||...
T Consensus        70 ~Vih~a~~~~~~~-----------------------~~~~~~~~~~~nv~gt~~ll~~~----~~~~-~~~~~~ss~~~  120 (342)
T d2blla1          70 VVLPLVAIATPIE-----------------------YTRNPLRVFELDFEENLRIIRYC----VKYR-KRIIFPSTSEV  120 (342)
T ss_dssp             EEEECBCCCCHHH-----------------------HHHSHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEECCGGG
T ss_pred             ccccccccccccc-----------------------cccCCcccccccccccccccccc----cccc-ccccccccccc
Confidence            9999998754311                       12223456899999999999998    4444 46677766543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.37  E-value=2.8e-13  Score=102.69  Aligned_cols=119  Identities=19%  Similarity=0.133  Sum_probs=86.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .||||||+|.||..++++|.++|++|+.+++......      ... .....+...|+.+.+++.++++       ++|.
T Consensus        17 KILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~   82 (363)
T d2c5aa1          17 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TED-MFCDEFHLVDLRVMENCLKVTE-------GVDH   82 (363)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGG-GTCSEEEECCTTSHHHHHHHHT-------TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhh-cccCcEEEeechhHHHHHHHhh-------cCCe
Confidence            3899999999999999999999999999987543210      000 0235677789888877766554       7899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      +||+|+......                      .+.+.....+.+|+.++.+++.++    ++.+..++|++||....
T Consensus        83 Vih~a~~~~~~~----------------------~~~~~~~~~~~~n~~gt~~ll~~~----~~~~vk~~i~~SS~~~~  135 (363)
T d2c5aa1          83 VFNLAADMGGMG----------------------FIQSNHSVIMYNNTMISFNMIEAA----RINGIKRFFYASSACIY  135 (363)
T ss_dssp             EEECCCCCCCHH----------------------HHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEEEEGGGS
T ss_pred             Eeeccccccccc----------------------ccccccccccccccchhhHHHHhH----HhhCccccccccccccc
Confidence            999998754321                      011223345889999999999888    45555789999997654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.35  E-value=1.6e-12  Score=96.48  Aligned_cols=107  Identities=15%  Similarity=0.205  Sum_probs=81.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .||||||+|.||.+++++|+++|+.++++.+..                     .+|+.|.+.+.++++.-     .+|.
T Consensus         4 kIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------~~~~~~~~~~~~~~~~~-----~~d~   57 (315)
T d1e6ua_           4 RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASE-----RIDQ   57 (315)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------hccccCHHHHHHHHhhc-----CCCE
Confidence            489999999999999999999999987765432                     25889999888877644     6899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCCc
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMGK  159 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~~  159 (174)
                      ++|+|+.....                      ..........+++|+.++.++++++    .+.+..++||+||.+..
T Consensus        58 v~~~a~~~~~~----------------------~~~~~~~~~~~~~Nv~gt~~ll~~a----~~~~v~~~i~~SS~~vy  110 (315)
T d1e6ua_          58 VYLAAAKVGGI----------------------VANNTYPADFIYQNMMIESNIIHAA----HQNDVNKLLFLGSSCIY  110 (315)
T ss_dssp             EEECCCCCCCH----------------------HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGS
T ss_pred             EEEcchhcccc----------------------ccchhhHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECCceEc
Confidence            99999764321                      0112223345789999999999888    44555689999997754

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.35  E-value=4.8e-12  Score=96.53  Aligned_cols=128  Identities=21%  Similarity=0.182  Sum_probs=90.1

Q ss_pred             CEEEecCCCchhHHHHHHHHH-CCCeEEEEeeC---------hhHHHHHHHHHhhc-------CCCceeEEEeecCChhh
Q 035504            1 YAVVTGANKGIGYETVRQLAS-NGIIVVLTARD---------EKRGLEAVEKLKHS-------GFDSVIFHQLDVADPAT   63 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~-~g~~v~~~~r~---------~~~~~~~~~~l~~~-------~~~~~~~~~~Dv~~~~~   63 (174)
                      .||||||+|.||..++++|++ .|++|+++++-         .+...+....+...       ...+..++.+|++|.+.
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~   83 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF   83 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHH
Confidence            389999999999999999986 68999998741         11122222223221       22357889999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhcc
Q 035504           64 IHSLADFVRSQFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQ  143 (174)
Q Consensus        64 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~  143 (174)
                      ++++++.    ..++|++||+|+......                       ..+.....+++|+.++..+++++    +
T Consensus        84 l~~~~~~----~~~~d~ViH~Aa~~~~~~-----------------------~~~~~~~~~~~N~~~t~~~l~~~----~  132 (383)
T d1gy8a_          84 LNGVFTR----HGPIDAVVHMCAFLAVGE-----------------------SVRDPLKYYDNNVVGILRLLQAM----L  132 (383)
T ss_dssp             HHHHHHH----SCCCCEEEECCCCCCHHH-----------------------HHHCHHHHHHHHHHHHHHHHHHH----H
T ss_pred             hhhhhhc----cceeehhhcccccccccc-----------------------cccccccccccccccccccchhh----h
Confidence            8877763    457999999998744221                       12223456889999999999888    4


Q ss_pred             CCCCCeEEEEecCCCc
Q 035504          144 LSDLPRIVNVSSNMGK  159 (174)
Q Consensus       144 ~~~~g~iv~isS~~~~  159 (174)
                      +.+..++++++|....
T Consensus       133 ~~~~~~~~~~~s~~~~  148 (383)
T d1gy8a_         133 LHKCDKIIFSSSAAIF  148 (383)
T ss_dssp             HTTCCEEEEEEEGGGT
T ss_pred             ccCCcccccccccccc
Confidence            5555678877776543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4.7e-14  Score=105.27  Aligned_cols=115  Identities=19%  Similarity=0.179  Sum_probs=74.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .+|||||+|.||..++++|+++|++|+.+++......+......  ...++.....|+.+.            .+.++|+
T Consensus         3 KIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~------------~~~~~d~   68 (312)
T d2b69a1           3 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEP------------LYIEVDQ   68 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSC------------CCCCCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhc--CCCceEEEehHHHHH------------HHcCCCE
Confidence            48999999999999999999999999999863221111111111  111243444443222            2236999


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |||+|+..+...                       ..++..+.+++|+.++.++++++    ++.+ -++|++||..
T Consensus        69 VihlAa~~~~~~-----------------------~~~~~~~~~~~Nv~g~~~ll~~~----~~~~-~k~I~~SS~~  117 (312)
T d2b69a1          69 IYHLASPASPPN-----------------------YMYNPIKTLKTNTIGTLNMLGLA----KRVG-ARLLLASTSE  117 (312)
T ss_dssp             EEECCSCCSHHH-----------------------HTTCHHHHHHHHHHHHHHHHHHH----HHHT-CEEEEEEEGG
T ss_pred             EEECcccCCchh-----------------------HHhCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEEChh
Confidence            999998744210                       01122345899999999999887    4444 4899999953

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.30  E-value=7.8e-13  Score=99.68  Aligned_cols=122  Identities=25%  Similarity=0.178  Sum_probs=83.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .||||||+|.||..++++|+++|++|.+++++...-......+......++.++.+|+.|.+.+..++.       ..+.
T Consensus         4 kILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~~~   76 (346)
T d1oc2a_           4 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KADA   76 (346)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hhhh
Confidence            389999999999999999999998766555431100000111122233469999999999998887765       6788


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      ++|.|+......                       ...+..+.+++|+.|+.+++.++.    +.+ .++|++||..
T Consensus        77 v~~~a~~~~~~~-----------------------~~~~~~~~~~~N~~g~~nll~~~~----~~~-~k~i~~ss~~  125 (346)
T d1oc2a_          77 IVHYAAESHNDN-----------------------SLNDPSPFIHTNFIGTYTLLEAAR----KYD-IRFHHVSTDE  125 (346)
T ss_dssp             EEECCSCCCHHH-----------------------HHHCCHHHHHHHTHHHHHHHHHHH----HHT-CEEEEEEEGG
T ss_pred             hhhhhhcccccc-----------------------hhhCcccceeeehHhHHhhhhhhc----ccc-ccccccccce
Confidence            999998744211                       111223558999999999998773    233 4778887764

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.25  E-value=4.7e-12  Score=94.43  Aligned_cols=123  Identities=21%  Similarity=0.151  Sum_probs=83.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeE------EEEeeChh-HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIV------VLTARDEK-RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v------~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      .||||||+|.||..++++|+++|+.|      +..+.... .-......+.  ...++.++..|.++........     
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~-----   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD--ADPRLRFVHGDIRDAGLLAREL-----   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT--TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhh--cCCCeEEEEeccccchhhhccc-----
Confidence            48999999999999999999999754      33333211 0001111111  1235999999999988766443     


Q ss_pred             hcCCccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEE
Q 035504           74 QFGKLDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNV  153 (174)
Q Consensus        74 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~i  153 (174)
                        ..+|.++|+|+......                       ........+++|+.++.++++++    .+.+..++|++
T Consensus        75 --~~~d~vi~~a~~~~~~~-----------------------~~~~~~~~~~~N~~gt~~ll~~~----~~~~~~~~I~~  125 (322)
T d1r6da_          75 --RGVDAIVHFAAESHVDR-----------------------SIAGASVFTETNVQGTQTLLQCA----VDAGVGRVVHV  125 (322)
T ss_dssp             --TTCCEEEECCSCCCHHH-----------------------HHHCCHHHHHHHTHHHHHHHHHH----HHTTCCEEEEE
T ss_pred             --cccceEEeecccccccc-----------------------cccchHHHhhhhHHHHHHHHHHH----HHcCCceEEEe
Confidence              37899999997743221                       11222345899999999999988    44555789999


Q ss_pred             ecCCCc
Q 035504          154 SSNMGK  159 (174)
Q Consensus       154 sS~~~~  159 (174)
                      ||....
T Consensus       126 Ss~~~y  131 (322)
T d1r6da_         126 STNQVY  131 (322)
T ss_dssp             EEGGGG
T ss_pred             ecceee
Confidence            997544

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.22  E-value=1.1e-11  Score=90.79  Aligned_cols=106  Identities=19%  Similarity=0.213  Sum_probs=77.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .+|||||+|.||.++++.|.++|..| .++++...                  +..|++|.+.+++++++.     ++|+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~-----~~D~   57 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE------------------FCGDFSNPKGVAETVRKL-----RPDV   57 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS------------------SCCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc------------------ccCcCCCHHHHHHHHHHc-----CCCE
Confidence            38999999999999999999988644 44443221                  247999999999988876     7899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |||+||...+..                       +.+.-...+++|+.++..+..++    ++.+ .+++++||...
T Consensus        58 Vih~Aa~~~~~~-----------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~~~ss~~~  107 (298)
T d1n2sa_          58 IVNAAAHTAVDK-----------------------AESEPELAQLLNATSVEAIAKAA----NETG-AWVVHYSTDYV  107 (298)
T ss_dssp             EEECCCCCCHHH-----------------------HTTCHHHHHHHHTHHHHHHHHHH----TTTT-CEEEEEEEGGG
T ss_pred             EEEecccccccc-----------------------cccCccccccccccccccchhhh----hccc-ccccccccccc
Confidence            999999754321                       01111345899999999999887    4443 67777777643

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.19  E-value=6.4e-11  Score=86.98  Aligned_cols=80  Identities=16%  Similarity=0.134  Sum_probs=60.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH-HHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG-LEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +||||||+|.||..++++|+++|++|+++.|+.... ....+.+......++.++.+|+.|.+.+.+.+.       +.+
T Consensus         5 KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~~   77 (312)
T d1qyda_           5 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QVD   77 (312)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Ccc
Confidence            589999999999999999999999999999864321 111222222222358899999999988877665       788


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      .++++++.
T Consensus        78 ~~~~~~~~   85 (312)
T d1qyda_          78 VVISALAG   85 (312)
T ss_dssp             EEEECCCC
T ss_pred             hhhhhhhh
Confidence            99998865

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.10  E-value=2.2e-10  Score=83.16  Aligned_cols=101  Identities=24%  Similarity=0.352  Sum_probs=74.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .+|||||+|.||..++++|.++|++|+.++|+.                      .|+.|.+++++++++.     ++|+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------~D~~d~~~~~~~l~~~-----~~d~   55 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------LDITNVLAVNKFFNEK-----KPNV   55 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------CCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------ccCCCHHHHHHHHHHc-----CCCE
Confidence            379999999999999999999999999988752                      4889999999888766     7899


Q ss_pred             EEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecC
Q 035504           81 LVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSN  156 (174)
Q Consensus        81 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~  156 (174)
                      +||+++.....                       .........+..|+.....+.......    . ..+++.||.
T Consensus        56 vih~a~~~~~~-----------------------~~~~~~~~~~~~n~~~~~~~~~~~~~~----~-~~~~~~ss~  103 (281)
T d1vl0a_          56 VINCAAHTAVD-----------------------KCEEQYDLAYKINAIGPKNLAAAAYSV----G-AEIVQISTD  103 (281)
T ss_dssp             EEECCCCCCHH-----------------------HHHHCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEG
T ss_pred             EEeeccccccc-----------------------cccccchhhcccccccccccccccccc----c-ccccccccc
Confidence            99999874321                       011222345778887777776665322    2 455565554

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.04  E-value=9.9e-11  Score=82.11  Aligned_cols=121  Identities=12%  Similarity=-0.047  Sum_probs=78.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|.||++++++|+++|+  +|+...|+...              ...-+..+..|..++.      ....+.+
T Consensus         4 kIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~--------------~~~~~~~~~~d~~~~~------~~~~~~~   63 (212)
T d2a35a1           4 RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------------EHPRLDNPVGPLAELL------PQLDGSI   63 (212)
T ss_dssp             EEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------------CCTTEECCBSCHHHHG------GGCCSCC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh--------------hcccccccccchhhhh------hccccch
Confidence            489999999999999999999997  56666665321              0111233444433221      1234578


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      |.+|+++|......                         ..-+...++|+.++..+++.+    ++.+..+++++||..+
T Consensus        64 d~vi~~~g~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~  114 (212)
T d2a35a1          64 DTAFCCLGTTIKEA-------------------------GSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGA  114 (212)
T ss_dssp             SEEEECCCCCHHHH-------------------------SSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTC
T ss_pred             heeeeeeeeecccc-------------------------ccccccccchhhhhhhccccc----cccccccccccccccc
Confidence            99999998642110                         001234789999999999887    6666688999999766


Q ss_pred             cccCCCCcceeeec
Q 035504          159 KLKNTWQGAICYLT  172 (174)
Q Consensus       159 ~~~~~~~~~y~~~k  172 (174)
                      ...  ....|..+|
T Consensus       115 ~~~--~~~~y~~~K  126 (212)
T d2a35a1         115 DAK--SSIFYNRVK  126 (212)
T ss_dssp             CTT--CSSHHHHHH
T ss_pred             ccc--cccchhHHH
Confidence            432  224454444

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.02  E-value=1.4e-09  Score=79.12  Aligned_cols=80  Identities=15%  Similarity=0.182  Sum_probs=61.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH--HHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG--LEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++|||||+|.||.+++++|+++|++|+++.|+....  .+....+.......+.++..|+.+.+...+.+.       ..
T Consensus         5 KILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~   77 (307)
T d1qyca_           5 RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------NV   77 (307)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------TC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------hc
Confidence            589999999999999999999999999999864321  122222333233458889999999988877766       78


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      +.+|++++.
T Consensus        78 ~~vi~~~~~   86 (307)
T d1qyca_          78 DVVISTVGS   86 (307)
T ss_dssp             SEEEECCCG
T ss_pred             eeeeecccc
Confidence            899998865

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.00  E-value=1.7e-09  Score=81.09  Aligned_cols=74  Identities=22%  Similarity=0.209  Sum_probs=55.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhH-HHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATI-HSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i-~~~~~~~~~~~g~id   79 (174)
                      +|+||||+|.||.+++++|+++|++|+++.|+..+...  ..+...  .++.++..|+.|..++ +.+       +...|
T Consensus         5 tIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~~--~~v~~~~gD~~d~~~~~~~a-------~~~~~   73 (350)
T d1xgka_           5 TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAI--PNVTLFQGPLLNNVPLMDTL-------FEGAH   73 (350)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTS--TTEEEEESCCTTCHHHHHHH-------HTTCS
T ss_pred             EEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhccc--CCCEEEEeeCCCcHHHHHHH-------hcCCc
Confidence            68999999999999999999999999999997654221  222222  2488999999986653 333       34778


Q ss_pred             EEEecc
Q 035504           80 ILVNNA   85 (174)
Q Consensus        80 ~li~~a   85 (174)
                      .++.+.
T Consensus        74 ~~~~~~   79 (350)
T d1xgka_          74 LAFINT   79 (350)
T ss_dssp             EEEECC
T ss_pred             eEEeec
Confidence            877765

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.76  E-value=1e-11  Score=85.78  Aligned_cols=48  Identities=17%  Similarity=0.228  Sum_probs=42.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF   48 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~   48 (174)
                      ++.|+||+|+||.++|+.|+++|++|++.+|+++++++..+++.+...
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~   49 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAG   49 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC
Confidence            367888889999999999999999999999999888888888876543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.56  E-value=5.1e-08  Score=70.88  Aligned_cols=116  Identities=19%  Similarity=0.231  Sum_probs=66.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh--hcCCc
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS--QFGKL   78 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~--~~g~i   78 (174)
                      ||||||+|.||..++++|+++|+ +|+++++-.... +..+ +..       ...+|..+   ..........  .+..+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~~-~~~-------~~~~~~~~---~~~~~~~~~~~~~~~~~   69 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFVN-LVD-------LNIADYMD---KEDFLIQIMAGEEFGDV   69 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGHH-HHT-------SCCSEEEE---HHHHHHHHHTTCCCSSC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhhc-ccc-------cchhhhcc---chHHHHHHhhhhcccch
Confidence            79999999999999999999996 577775422211 1111 110       01223222   2333333332  45678


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNMG  158 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~~  158 (174)
                      +.++|.|+.......                         ..+...+.|+.+...+..++.    ..+. ++++.||...
T Consensus        70 ~~i~~~aa~~~~~~~-------------------------~~~~~~~~~~~~~~~~l~~~~----~~~i-~~v~~ss~~~  119 (307)
T d1eq2a_          70 EAIFHEGACSSTTEW-------------------------DGKYMMDNNYQYSKELLHYCL----EREI-PFLYASSAAT  119 (307)
T ss_dssp             CEEEECCSCCCTTCC-------------------------CHHHHHHHTHHHHHHHHHHHH----HHTC-CEEEEEEGGG
T ss_pred             hhhhhhccccccccc-------------------------ccccccccccccccccccccc----cccc-cccccccccc
Confidence            899999975432110                         012236777888888877763    3332 3555555444


Q ss_pred             c
Q 035504          159 K  159 (174)
Q Consensus       159 ~  159 (174)
                      .
T Consensus       120 ~  120 (307)
T d1eq2a_         120 Y  120 (307)
T ss_dssp             G
T ss_pred             c
Confidence            3

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.37  E-value=2.4e-06  Score=58.33  Aligned_cols=84  Identities=15%  Similarity=0.062  Sum_probs=56.4

Q ss_pred             EEE-ecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHh-hcCCcc
Q 035504            2 AVV-TGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRS-QFGKLD   79 (174)
Q Consensus         2 ~li-tGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~-~~g~id   79 (174)
                      ++| +||++++|.+.+...-..|++|+.+.++.+..++..+.+++.+.+.+  +..|-.+..+....+.++.+ ..+++|
T Consensus        32 vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~v--i~~~~~~~~~~~~~v~~~~~~~g~~vd  109 (189)
T d1gu7a2          32 WFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV--ITEDQNNSREFGPTIKEWIKQSGGEAK  109 (189)
T ss_dssp             EEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE--EEHHHHHCGGGHHHHHHHHHHHTCCEE
T ss_pred             EEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEE--EeccccchhHHHHHHHHHHhhccCCce
Confidence            455 79999999999887777899999998877666666666666665532  22221222334444444443 445899


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      +++++.|.
T Consensus       110 vv~D~vg~  117 (189)
T d1gu7a2         110 LALNCVGG  117 (189)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCc
Confidence            99999874

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.20  E-value=2.7e-05  Score=51.80  Aligned_cols=79  Identities=27%  Similarity=0.328  Sum_probs=53.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC-Ccc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG-KLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g-~id   79 (174)
                      +++|.| +|++|...+..+...|++|+++++++++. +.++++   +.+ . .+..| ...++.....+++.+..| ++|
T Consensus        29 ~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~-~~a~~~---ga~-~-~~~~~-~~~~~~~~~~~~~~~~~g~g~D  100 (170)
T d1e3ja2          29 TVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKNC---GAD-V-TLVVD-PAKEEESSIIERIRSAIGDLPN  100 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHT---TCS-E-EEECC-TTTSCHHHHHHHHHHHSSSCCS
T ss_pred             EEEEEc-ccccchhhHhhHhhhcccccccchHHHHH-HHHHHc---CCc-E-EEecc-ccccccchhhhhhhcccccCCc
Confidence            478887 58999999998888999999999987653 333333   222 1 12222 233445556666766654 799


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.++|.
T Consensus       101 ~vid~~g~  108 (170)
T d1e3ja2         101 VTIDCSGN  108 (170)
T ss_dssp             EEEECSCC
T ss_pred             eeeecCCC
Confidence            99999975

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.07  E-value=1.2e-05  Score=54.24  Aligned_cols=77  Identities=18%  Similarity=0.179  Sum_probs=53.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+||++|+|.+.+......|++|+.+.+++++. +.   +.+.+.+ .   ..|..+++..+++.+..  ...++|+
T Consensus        32 ~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~-~~---~~~~Ga~-~---vi~~~~~~~~~~~~~~~--~~~Gvd~  101 (182)
T d1v3va2          32 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-AY---LKQIGFD-A---AFNYKTVNSLEEALKKA--SPDGYDC  101 (182)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HH---HHHTTCS-E---EEETTSCSCHHHHHHHH--CTTCEEE
T ss_pred             EEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH-HH---HHhhhhh-h---hcccccccHHHHHHHHh--hcCCCce
Confidence            489999999999999998889999999999886542 22   2333322 1   23545555555444432  2347999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      ++++.|.
T Consensus       102 v~D~vG~  108 (182)
T d1v3va2         102 YFDNVGG  108 (182)
T ss_dssp             EEESSCH
T ss_pred             eEEecCc
Confidence            9999974

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.01  E-value=2.8e-05  Score=52.54  Aligned_cols=77  Identities=22%  Similarity=0.210  Sum_probs=57.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHH---HHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEA---VEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++|.|+ ||.|++++..|.+.|. +++++.|+.+..++.   .+.+.....  ......|+.+.+++.....       .
T Consensus        21 vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------~   90 (182)
T d1vi2a1          21 MVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD--CVVTVTDLADQQAFAEALA-------S   90 (182)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS--CEEEEEETTCHHHHHHHHH-------T
T ss_pred             EEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcC--cceEeeecccccchhhhhc-------c
Confidence            678887 7999999999999998 588999986655443   344444432  4566788888887766554       7


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      .|++||+....
T Consensus        91 ~diiIN~Tp~G  101 (182)
T d1vi2a1          91 ADILTNGTKVG  101 (182)
T ss_dssp             CSEEEECSSTT
T ss_pred             cceeccccCCc
Confidence            89999998664

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2.5e-05  Score=52.31  Aligned_cols=77  Identities=21%  Similarity=0.307  Sum_probs=51.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+||++++|...+......|++|+.+.+++++ .+.+++   .+.+.    ..|.++++-.+++.+..  .-.++|+
T Consensus        31 ~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~-~~~~~~---~Ga~~----vi~~~~~~~~~~i~~~t--~~~g~d~  100 (174)
T d1yb5a2          31 SVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG-QKIVLQ---NGAHE----VFNHREVNYIDKIKKYV--GEKGIDI  100 (174)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHH---TTCSE----EEETTSTTHHHHHHHHH--CTTCEEE
T ss_pred             EEEEEeccccccccccccccccCcccccccccccc-cccccc---cCccc----ccccccccHHHHhhhhh--ccCCceE
Confidence            48999999999999999888899999999887543 233333   34332    23666654333332222  1236999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      ++.+.|-
T Consensus       101 v~d~~g~  107 (174)
T d1yb5a2         101 IIEMLAN  107 (174)
T ss_dssp             EEESCHH
T ss_pred             EeecccH
Confidence            9999874

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.90  E-value=2e-05  Score=50.38  Aligned_cols=72  Identities=18%  Similarity=0.322  Sum_probs=54.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.|+ |.+|+.+++.|.++|++|++++++++..++..+++      +..++..|.+|++.++++      .....|.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~------~~~vi~Gd~~~~~~l~~~------~i~~a~~   68 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI------DALVINGDCTKIKTLEDA------GIEDADM   68 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------SSEEEESCTTSHHHHHHT------TTTTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh------hhhhccCcccchhhhhhc------Chhhhhh
Confidence            3788887 99999999999999999999999987665544332      367788999998876543      1235677


Q ss_pred             EEecc
Q 035504           81 LVNNA   85 (174)
Q Consensus        81 li~~a   85 (174)
                      ++...
T Consensus        69 vv~~t   73 (132)
T d1lssa_          69 YIAVT   73 (132)
T ss_dssp             EEECC
T ss_pred             hcccC
Confidence            76654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.86  E-value=3.9e-05  Score=51.03  Aligned_cols=71  Identities=20%  Similarity=0.245  Sum_probs=48.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|| |.+|..+|+.|.++|++|++++|+.+.+.+..+.+     ........+..+.......+.       ..|.+
T Consensus         5 IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~-----~~~~~~~~~~~~~~~~~~~i~-------~~~~~   71 (182)
T d1e5qa1           5 VLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV-----QHSTPISLDVNDDAALDAEVA-------KHDLV   71 (182)
T ss_dssp             EEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC-----TTEEEEECCTTCHHHHHHHHT-------TSSEE
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc-----cccccccccccchhhhHhhhh-------cccee
Confidence            678877 99999999999999999999999988766655433     224444455555444444433       45666


Q ss_pred             Eecc
Q 035504           82 VNNA   85 (174)
Q Consensus        82 i~~a   85 (174)
                      +...
T Consensus        72 i~~~   75 (182)
T d1e5qa1          72 ISLI   75 (182)
T ss_dssp             EECS
T ss_pred             Eeec
Confidence            6544

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=0.00013  Score=48.47  Aligned_cols=77  Identities=23%  Similarity=0.291  Sum_probs=51.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC-Cc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG-KL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g-~i   78 (174)
                      +++|.|+ |++|...+..+...|+ +|+++++++.+. +.++++   +.+  .++   ..+.++.....+.+....| ++
T Consensus        29 ~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl-~~a~~~---Ga~--~~~---~~~~~~~~~~~~~~~~~~g~g~   98 (171)
T d1pl8a2          29 KVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRL-SKAKEI---GAD--LVL---QISKESPQEIARKVEGQLGCKP   98 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHT---TCS--EEE---ECSSCCHHHHHHHHHHHHTSCC
T ss_pred             EEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHH-HHHHHh---CCc--ccc---cccccccccccccccccCCCCc
Confidence            4688876 9999999998888998 699999886643 334444   222  111   1233445555555555554 79


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.++|.
T Consensus        99 Dvvid~~G~  107 (171)
T d1pl8a2          99 EVTIECTGA  107 (171)
T ss_dssp             SEEEECSCC
T ss_pred             eEEEeccCC
Confidence            999999985

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.83  E-value=5e-05  Score=50.21  Aligned_cols=70  Identities=20%  Similarity=0.272  Sum_probs=52.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      .++|.|+ |++|..+++.|..+|+ ++.++.|+.+.+++.++++.      ..     ..+.+++.+.+.       ..|
T Consensus        26 ~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~------~~-----~~~~~~~~~~l~-------~~D   86 (159)
T d1gpja2          26 TVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG------GE-----AVRFDELVDHLA-------RSD   86 (159)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT------CE-----ECCGGGHHHHHH-------TCS
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh------cc-----cccchhHHHHhc-------cCC
Confidence            3789998 9999999999999998 58899999888777776652      11     123445555544       789


Q ss_pred             EEEecccccC
Q 035504           80 ILVNNAAIFG   89 (174)
Q Consensus        80 ~li~~ag~~~   89 (174)
                      ++|++.+...
T Consensus        87 ivi~atss~~   96 (159)
T d1gpja2          87 VVVSATAAPH   96 (159)
T ss_dssp             EEEECCSSSS
T ss_pred             EEEEecCCCC
Confidence            9999987643

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=2.9e-05  Score=52.68  Aligned_cols=77  Identities=19%  Similarity=0.205  Sum_probs=50.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEE-EeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      ++||+||+||+|...+...-..|+++++ +..++++..+..+++   +.+    ...|..+ ++..+.+.++..  .++|
T Consensus        33 tVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad----~vi~~~~-~~~~~~~~~~~~--~GvD  102 (187)
T d1vj1a2          33 TMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFD----AAVNYKT-GNVAEQLREACP--GGVD  102 (187)
T ss_dssp             EEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCS----EEEETTS-SCHHHHHHHHCT--TCEE
T ss_pred             EEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cce----EEeeccc-hhHHHHHHHHhc--cCce
Confidence            4899999999999999887778987554 455554444444333   222    2335444 345555555532  4699


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      +++.+.|-
T Consensus       103 vv~D~vGg  110 (187)
T d1vj1a2         103 VYFDNVGG  110 (187)
T ss_dssp             EEEESSCH
T ss_pred             EEEecCCc
Confidence            99999974

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.77  E-value=6.2e-05  Score=50.51  Aligned_cols=75  Identities=19%  Similarity=0.189  Sum_probs=50.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc--CCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF--GKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~--g~i   78 (174)
                      ++||+||++++|...+..+...|++++.+.+++++. +.   +++.+.+.    ..|..+++ +.+   ++++..  .++
T Consensus        28 ~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~-~~---l~~~Ga~~----vi~~~~~~-~~~---~v~~~t~~~g~   95 (183)
T d1pqwa_          28 RVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-EM---LSRLGVEY----VGDSRSVD-FAD---EILELTDGYGV   95 (183)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HH---HHTTCCSE----EEETTCST-HHH---HHHHHTTTCCE
T ss_pred             EEEEECCCCCcccccchhhccccccceeeecccccc-cc---cccccccc----cccCCccC-HHH---HHHHHhCCCCE
Confidence            489999999999999998888899999998876542 22   33444331    23444443 333   333332  369


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |+++.+.|.
T Consensus        96 d~v~d~~g~  104 (183)
T d1pqwa_          96 DVVLNSLAG  104 (183)
T ss_dssp             EEEEECCCT
T ss_pred             EEEEecccc
Confidence            999999973

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.74  E-value=5e-05  Score=50.85  Aligned_cols=77  Identities=10%  Similarity=0.110  Sum_probs=52.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+||++++|...+......|++|+.+.+++++. +.++++   +.+    ...|.++++ +.+-+.++. .-.++|+
T Consensus        31 ~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~-~~~~~l---Ga~----~vi~~~~~d-~~~~v~~~t-~g~g~d~  100 (179)
T d1qora2          31 QFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA-QSALKA---GAW----QVINYREED-LVERLKEIT-GGKKVRV  100 (179)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHHH---TCS----EEEETTTSC-HHHHHHHHT-TTCCEEE
T ss_pred             EEEEEccccccchHHHHHHHHhCCeEeecccchHHH-HHHHhc---CCe----EEEECCCCC-HHHHHHHHh-CCCCeEE
Confidence            479999999999999998888899999999997654 333333   323    124665644 333333321 2236899


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      ++.+.|.
T Consensus       101 v~d~~g~  107 (179)
T d1qora2         101 VYDSVGR  107 (179)
T ss_dssp             EEECSCG
T ss_pred             EEeCccH
Confidence            9999874

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.72  E-value=5.2e-05  Score=50.98  Aligned_cols=75  Identities=20%  Similarity=0.220  Sum_probs=47.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++||+||++|+|...+...-..|++|+.+.+++++. +.++++   +.+ ...   |-.+  ...+.+..+  .-+++|+
T Consensus        34 ~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~-~~~~~l---Ga~-~vi---~~~~--~~~~~~~~~--~~~gvD~  101 (176)
T d1xa0a2          34 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH-DYLRVL---GAK-EVL---ARED--VMAERIRPL--DKQRWAA  101 (176)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH-HHHHHT---TCS-EEE---ECC-----------C--CSCCEEE
T ss_pred             EEEEEeccchHHHHHHHHHHHcCCceEEecCchHHH-HHHHhc---ccc-eee---ecch--hHHHHHHHh--hccCcCE
Confidence            589999999999999998888999999999886643 333333   323 211   2221  112222111  2348999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|.+.|-
T Consensus       102 vid~vgg  108 (176)
T d1xa0a2         102 AVDPVGG  108 (176)
T ss_dssp             EEECSTT
T ss_pred             EEEcCCc
Confidence            9999985

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.58  E-value=0.00077  Score=43.55  Aligned_cols=77  Identities=16%  Similarity=0.124  Sum_probs=49.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC--CeEEEEeeChh--HHHHHHHHHhh---cCCCceeEEEeecCChhhHHHHHHHHHh
Q 035504            1 YAVVTGANKGIGYETVRQLASNG--IIVVLTARDEK--RGLEAVEKLKH---SGFDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~--~~~~~~~~l~~---~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      ++.|.||+|.+|..+|..|+.+|  .+++++++++.  .++-...++..   ..+.+......--.|.+++         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l---------   72 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRII---------   72 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHh---------
Confidence            36899999999999999999998  48999998753  22333334432   2222233322211233332         


Q ss_pred             hcCCccEEEeccccc
Q 035504           74 QFGKLDILVNNAAIF   88 (174)
Q Consensus        74 ~~g~id~li~~ag~~   88 (174)
                        ..-|++|.+||..
T Consensus        73 --~~aDvVVitAG~~   85 (145)
T d1hyea1          73 --DESDVVIITSGVP   85 (145)
T ss_dssp             --TTCSEEEECCSCC
T ss_pred             --ccceEEEEecccc
Confidence              2789999999973

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.52  E-value=9.2e-05  Score=42.70  Aligned_cols=42  Identities=36%  Similarity=0.406  Sum_probs=33.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL   43 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   43 (174)
                      ++||+||++|+|...+..+-..|++|+.+.++++.. +.++++
T Consensus        34 ~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~-~~~~~l   75 (77)
T d1o8ca2          34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH-EYLKSL   75 (77)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH-HHHHHH
T ss_pred             cEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH-HHHHHC
Confidence            379999999999999998888899999998886543 444433

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.52  E-value=0.0002  Score=47.60  Aligned_cols=71  Identities=18%  Similarity=0.283  Sum_probs=47.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|+||++++|...+..+-..|++|+.+.+++++.+ .++++   +.+.+    .|..+   ..   .++. ...++|+
T Consensus        30 ~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~-~~~~l---Ga~~~----i~~~~---~~---~~~~-~~~g~D~   94 (171)
T d1iz0a2          30 KVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL---GAEEA----ATYAE---VP---ERAK-AWGGLDL   94 (171)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH-HHHHT---TCSEE----EEGGG---HH---HHHH-HTTSEEE
T ss_pred             EEEEEeccccchhhhhhhhcccccccccccccccccc-ccccc---cccee----eehhh---hh---hhhh-ccccccc
Confidence            4899999999999999988889999999988765433 33333   32322    23322   11   2222 3457999


Q ss_pred             EEeccc
Q 035504           81 LVNNAA   86 (174)
Q Consensus        81 li~~ag   86 (174)
                      ++.+.|
T Consensus        95 v~d~~G  100 (171)
T d1iz0a2          95 VLEVRG  100 (171)
T ss_dssp             EEECSC
T ss_pred             cccccc
Confidence            999876

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.52  E-value=0.001  Score=42.96  Aligned_cols=72  Identities=15%  Similarity=0.089  Sum_probs=49.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhc--CCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHS--GFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|.|+ |.+|..+|..|+.+|  .+|++++++++.++-...++...  ..........|   .+++           ..
T Consensus         8 I~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~~~-----------~~   72 (146)
T d1ez4a1           8 VVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YSDC-----------KD   72 (146)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GGGG-----------TT
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---HHHh-----------cc
Confidence            678896 889999999999987  58999999877665555555431  11123333333   3322           26


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      .|++|.++|..
T Consensus        73 adivvitag~~   83 (146)
T d1ez4a1          73 ADLVVITAGAP   83 (146)
T ss_dssp             CSEEEECCCC-
T ss_pred             ccEEEEecccc
Confidence            89999999874

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.48  E-value=0.0014  Score=42.15  Aligned_cols=117  Identities=15%  Similarity=0.110  Sum_probs=69.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++.|.||+|.+|..+|..|..+|.  ++++++.++..  -...++...  ........-+ ...+..+.++       .-
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~--~~a~Dl~~~--~~~~~~~~~~-~~~~~~~~~~-------~a   69 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP--GVAADLSHI--ETRATVKGYL-GPEQLPDCLK-------GC   69 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH--HHHHHHTTS--SSSCEEEEEE-SGGGHHHHHT-------TC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccc--hhhHHHhhh--hhhcCCCeEE-cCCChHHHhC-------CC
Confidence            378999999999999999998874  69999886532  223344321  1111122222 2334433333       78


Q ss_pred             cEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           79 DILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        79 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      |++|..+|....+.              +....           .++.|+.-..-+++.+.++   .+.+.|+.+|...
T Consensus        70 DivVitag~~~~~g--------------~sR~~-----------ll~~N~~i~~~i~~~i~~~---~p~~iiivvtNPv  120 (144)
T d1mlda1          70 DVVVIPAGVPRKPG--------------MTRDD-----------LFNTNATIVATLTAACAQH---CPDAMICIISNPV  120 (144)
T ss_dssp             SEEEECCSCCCCTT--------------CCGGG-----------GHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCH
T ss_pred             CEEEECCCcCCCCC--------------CCcch-----------HHHHHHHHHHHHHHHHHhc---CCCeEEEEecCch
Confidence            99999999733211              11222           2778876666666555433   3346777776543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.47  E-value=0.00053  Score=44.77  Aligned_cols=76  Identities=21%  Similarity=0.175  Sum_probs=43.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC----e---EEEE--eeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGI----I---VVLT--ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVR   72 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~----~---v~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   72 (174)
                      +.|+||+|.+|..++..|++.+.    .   +.+.  .+..+..+....++..........+...-.+++          
T Consensus         7 V~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------   76 (154)
T d1y7ta1           7 VAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV----------   76 (154)
T ss_dssp             EEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH----------
T ss_pred             EEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh----------
Confidence            78999999999999999998652    1   2222  223333333333333322222333333222222          


Q ss_pred             hhcCCccEEEeccccc
Q 035504           73 SQFGKLDILVNNAAIF   88 (174)
Q Consensus        73 ~~~g~id~li~~ag~~   88 (174)
                       .+...|++|..+|..
T Consensus        77 -~~~~advViitaG~~   91 (154)
T d1y7ta1          77 -AFKDADYALLVGAAP   91 (154)
T ss_dssp             -HTTTCSEEEECCCCC
T ss_pred             -hcccccEEEeecCcC
Confidence             223899999999974

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.00033  Score=46.52  Aligned_cols=70  Identities=21%  Similarity=0.266  Sum_probs=51.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|+ ||.+++++..|.+.|.++.++.|+.+++++..+.+...+  .+...  +..+.            .....|++
T Consensus        21 vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~--~~~~~--~~~~~------------~~~~~dli   83 (170)
T d1nyta1          21 ILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG--SIQAL--SMDEL------------EGHEFDLI   83 (170)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS--SEEEC--CSGGG------------TTCCCSEE
T ss_pred             EEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc--ccccc--ccccc------------ccccccee
Confidence            678886 899999999999999999999999988888877776543  12222  21111            12368999


Q ss_pred             Eeccccc
Q 035504           82 VNNAAIF   88 (174)
Q Consensus        82 i~~ag~~   88 (174)
                      ||+....
T Consensus        84 IN~Tp~G   90 (170)
T d1nyta1          84 INATSSG   90 (170)
T ss_dssp             EECCSCG
T ss_pred             ecccccC
Confidence            9998654

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.43  E-value=0.00051  Score=45.92  Aligned_cols=77  Identities=19%  Similarity=0.236  Sum_probs=50.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhc--CC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQF--GK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~--g~   77 (174)
                      +++|.|+ |++|...+..+-..|+ +|+++++++++. +.++++   +.+ .   ..|..+ ++..+..+++.+..  .+
T Consensus        31 ~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~-~~a~~l---Ga~-~---vi~~~~-~~~~~~~~~i~~~~~~~g  100 (182)
T d1vj0a2          31 TVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAEEI---GAD-L---TLNRRE-TSVEERRKAIMDITHGRG  100 (182)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHHHT---TCS-E---EEETTT-SCHHHHHHHHHHHTTTSC
T ss_pred             EEEEECC-Cccchhheecccccccccccccccccccc-cccccc---cce-E---EEeccc-cchHHHHHHHHHhhCCCC
Confidence            4789987 8999999998888998 799999987654 344444   222 1   224433 23334444444433  25


Q ss_pred             ccEEEecccc
Q 035504           78 LDILVNNAAI   87 (174)
Q Consensus        78 id~li~~ag~   87 (174)
                      +|++|.++|.
T Consensus       101 ~Dvvid~vG~  110 (182)
T d1vj0a2         101 ADFILEATGD  110 (182)
T ss_dssp             EEEEEECSSC
T ss_pred             ceEEeecCCc
Confidence            9999999975

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.43  E-value=0.001  Score=43.05  Aligned_cols=73  Identities=25%  Similarity=0.248  Sum_probs=50.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|.|+ |.+|..+|..|+.+|.  ++++++++++.++-.+.++...   ......+...|   .+++           .
T Consensus         9 I~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~~~l-----------~   73 (148)
T d1ldna1           9 VVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---YDDC-----------R   73 (148)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---GGGT-----------T
T ss_pred             EEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---HHHh-----------c
Confidence            678897 9999999999999874  7999999877666555555432   22223333333   3332           2


Q ss_pred             CccEEEecccccC
Q 035504           77 KLDILVNNAAIFG   89 (174)
Q Consensus        77 ~id~li~~ag~~~   89 (174)
                      .-|++|.++|...
T Consensus        74 daDvvvitag~~~   86 (148)
T d1ldna1          74 DADLVVICAGANQ   86 (148)
T ss_dssp             TCSEEEECCSCCC
T ss_pred             cceeEEEeccccc
Confidence            6899999998743

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=0.0026  Score=40.91  Aligned_cols=117  Identities=15%  Similarity=0.091  Sum_probs=65.9

Q ss_pred             CEEEecCCCchhHHHHHHHHH-C--CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            1 YAVVTGANKGIGYETVRQLAS-N--GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~-~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      ++.|+|++|.+|.++|..|.. .  +.++++.+..+ ..+..+.++.... .......  +....+.+ .+.       .
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~-~~~~~~~--~~~~~~~~-~~~-------~   69 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP-TAVKIKG--FSGEDATP-ALE-------G   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSC-SSCEEEE--ECSSCCHH-HHT-------T
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCc-cccCCcE--EEcCCCcc-ccC-------C
Confidence            368999999999999998864 3  36899998764 3444444554322 1111111  22222222 122       6


Q ss_pred             ccEEEecccccCccCCCCCccccccCCCCcccccccccCHHHHHHhhHhhhhhHHHHHHhhhhhccCCCCCeEEEEecCC
Q 035504           78 LDILVNNAAIFGVSVDGDALSGFVKDGEPIKWNEIVTPTYELAEKCLRTNYYGSKRMCEVLIPLLQLSDLPRIVNVSSNM  157 (174)
Q Consensus        78 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~g~iv~isS~~  157 (174)
                      -|++|..+|....+.              ++...           .++.|..-...+.+.+.++   .+.+.++.+|.-.
T Consensus        70 aDvvvitaG~~~k~g--------------~~R~d-----------l~~~N~~i~~~v~~~i~~~---~p~aivivvtNPv  121 (145)
T d2cmda1          70 ADVVLISAGVRRKPG--------------MDRSD-----------LFNVNAGIVKNLVQQVAKT---CPKACIGIITNPV  121 (145)
T ss_dssp             CSEEEECCSCCCCTT--------------CCGGG-----------GHHHHHHHHHHHHHHHHHH---CTTSEEEECSSSH
T ss_pred             CCEEEECCCccCCCC--------------cchhh-----------HHHHHHHHHHHHHHHHHhh---CCCcEEEEccCCc
Confidence            799999999743211              11222           2777765555555555322   3456777777643

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.37  E-value=0.00029  Score=44.70  Aligned_cols=71  Identities=14%  Similarity=0.124  Sum_probs=50.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|+ |-+|..+++.|.++|++|++++.+++..++.    ...+   ...+..|.++++.++++      .....|.+
T Consensus         3 ~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~----~~~~---~~~~~gd~~~~~~l~~a------~i~~a~~v   68 (134)
T d2hmva1           3 FAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYA---THAVIANATEENELLSL------GIRNFEYV   68 (134)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT----TTTC---SEEEECCTTCTTHHHHH------TGGGCSEE
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH----HHhC---Ccceeeecccchhhhcc------CCccccEE
Confidence            567777 7899999999999999999999987654443    3222   45667898888776543      11256777


Q ss_pred             Eeccc
Q 035504           82 VNNAA   86 (174)
Q Consensus        82 i~~ag   86 (174)
                      |...+
T Consensus        69 i~~~~   73 (134)
T d2hmva1          69 IVAIG   73 (134)
T ss_dssp             EECCC
T ss_pred             EEEcC
Confidence            66653

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.30  E-value=0.00077  Score=44.75  Aligned_cols=70  Identities=19%  Similarity=0.255  Sum_probs=51.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|+ ||.+++++..|.+.+.+|.++.|+.+++++..+.+....  .+.....|-.              .....|++
T Consensus        21 vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~--~~~~~~~~~~--------------~~~~~dii   83 (171)
T d1p77a1          21 VLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG--NIQAVSMDSI--------------PLQTYDLV   83 (171)
T ss_dssp             EEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS--CEEEEEGGGC--------------CCSCCSEE
T ss_pred             EEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc--ccchhhhccc--------------ccccccee
Confidence            566665 888999999999988899999999988888888776543  2444433311              12378999


Q ss_pred             Eeccccc
Q 035504           82 VNNAAIF   88 (174)
Q Consensus        82 i~~ag~~   88 (174)
                      ||+....
T Consensus        84 IN~tp~g   90 (171)
T d1p77a1          84 INATSAG   90 (171)
T ss_dssp             EECCCC-
T ss_pred             eeccccc
Confidence            9998764

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.28  E-value=0.0038  Score=41.45  Aligned_cols=76  Identities=17%  Similarity=0.042  Sum_probs=44.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCC---C----eEEEEeeChh--HHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNG---I----IVVLTARDEK--RGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVR   72 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g---~----~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   72 (174)
                      +.|+||+|.||..++..|++..   .    .+.+.+....  .++...-+++............  ++  +..+      
T Consensus        27 V~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~--~~--~~~~------   96 (175)
T d7mdha1          27 IAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI--GI--DPYE------   96 (175)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE--ES--CHHH------
T ss_pred             EEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc--cc--cchh------
Confidence            7899999999999999999853   2    3555555432  2333333444332222222221  11  1222      


Q ss_pred             hhcCCccEEEeccccc
Q 035504           73 SQFGKLDILVNNAAIF   88 (174)
Q Consensus        73 ~~~g~id~li~~ag~~   88 (174)
                       .+...|++|..+|..
T Consensus        97 -~~~~aDvVvi~ag~~  111 (175)
T d7mdha1          97 -VFEDVDWALLIGAKP  111 (175)
T ss_dssp             -HTTTCSEEEECCCCC
T ss_pred             -hccCCceEEEeeccC
Confidence             334899999999874

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.28  E-value=0.00052  Score=45.31  Aligned_cols=77  Identities=16%  Similarity=0.218  Sum_probs=50.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+++++|...+..+...|+ +|+++++++++ .+.++++   +.+    ...|.++++..++..+..  .-+++|
T Consensus        30 ~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~-~~~~~~~---Ga~----~~i~~~~~~~~~~~~~~~--~~~~~d   99 (170)
T d1jvba2          30 TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEA-VEAAKRA---GAD----YVINASMQDPLAEIRRIT--ESKGVD   99 (170)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHH-HHHHHHH---TCS----EEEETTTSCHHHHHHHHT--TTSCEE
T ss_pred             EEEEEeccccceeeeeecccccccccccccccchhh-HHHHHHc---CCc----eeeccCCcCHHHHHHHHh--hcccch
Confidence            479999999999999998888885 78888877654 3333333   322    123444544444433222  123699


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.++|.
T Consensus       100 ~vid~~g~  107 (170)
T d1jvba2         100 AVIDLNNS  107 (170)
T ss_dssp             EEEESCCC
T ss_pred             hhhccccc
Confidence            99999985

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=0.00079  Score=43.65  Aligned_cols=74  Identities=15%  Similarity=0.180  Sum_probs=53.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|. +-+|..+++.|.++|.+++++..+++...+..+++..   .++.++..|.+|++.++++-      ....+.+
T Consensus         6 iII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~---~~~~vi~Gd~~d~~~L~~a~------i~~a~~v   75 (153)
T d1id1a_           6 FIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---DNADVIPGDSNDSSVLKKAG------IDRCRAI   75 (153)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---TTCEEEESCTTSHHHHHHHT------TTTCSEE
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc---CCcEEEEccCcchHHHHHhc------cccCCEE
Confidence            677777 7999999999999999999999887655555444433   24788899998887654321      2256677


Q ss_pred             Eecc
Q 035504           82 VNNA   85 (174)
Q Consensus        82 i~~a   85 (174)
                      |...
T Consensus        76 i~~~   79 (153)
T d1id1a_          76 LALS   79 (153)
T ss_dssp             EECS
T ss_pred             EEcc
Confidence            7665

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.27  E-value=0.0018  Score=43.75  Aligned_cols=76  Identities=16%  Similarity=0.182  Sum_probs=48.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ +++|...+..+...|+ +|+++++++.+. +.++++   +   ...  ......+++.+.+.++. .-.++|
T Consensus        28 tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl-~~a~~~---G---a~~--~~~~~~~~~~~~i~~~t-~g~g~D   96 (195)
T d1kola2          28 TVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKAQ---G---FEI--ADLSLDTPLHEQIAALL-GEPEVD   96 (195)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHT---T---CEE--EETTSSSCHHHHHHHHH-SSSCEE
T ss_pred             EEEEECc-CHHHHHHHHHHHhhcccceeeecccchhh-Hhhhhc---c---ccE--EEeCCCcCHHHHHHHHh-CCCCcE
Confidence            4789986 8999888887777787 688888876543 333333   2   111  22333345555444442 233699


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.+.|.
T Consensus        97 ~vid~vG~  104 (195)
T d1kola2          97 CAVDAVGF  104 (195)
T ss_dssp             EEEECCCT
T ss_pred             EEEECccc
Confidence            99999985

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.24  E-value=0.0004  Score=46.29  Aligned_cols=76  Identities=13%  Similarity=0.051  Sum_probs=48.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ |++|...+..+...|+ +|+.+++++++ .+.++++.   .+  .  ..|..+++ ..+.+.++.+ ..++|
T Consensus        30 ~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r-~~~a~~lG---a~--~--~i~~~~~~-~~~~v~~~t~-g~G~D   98 (174)
T d1jqba2          30 SVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPIC-VEAAKFYG---AT--D--ILNYKNGH-IEDQVMKLTN-GKGVD   98 (174)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHH-HHHHHHHT---CS--E--EECGGGSC-HHHHHHHHTT-TSCEE
T ss_pred             EEEEEcC-Ccchhhhhhhhhcccccccccccchhhh-HHHHHhhC---cc--c--cccccchh-HHHHHHHHhh-ccCcc
Confidence            5789986 8999998888888897 68889888654 34444442   12  1  23544433 3333333322 12599


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.++|.
T Consensus        99 ~vid~~g~  106 (174)
T d1jqba2          99 RVIMAGGG  106 (174)
T ss_dssp             EEEECSSC
T ss_pred             eEEEccCC
Confidence            99999986

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.23  E-value=0.00054  Score=45.51  Aligned_cols=75  Identities=16%  Similarity=0.199  Sum_probs=47.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEE-EeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVL-TARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ +++|...+..+...|+++++ +++++.+ .+.++++   +.+  .  ..|..+ +++.+.+.++.  -+++|
T Consensus        31 ~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k-~~~a~~~---Ga~--~--~i~~~~-~~~~~~i~~~t--~gg~D   98 (174)
T d1f8fa2          31 SFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESR-LELAKQL---GAT--H--VINSKT-QDPVAAIKEIT--DGGVN   98 (174)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHH-HHHHHHH---TCS--E--EEETTT-SCHHHHHHHHT--TSCEE
T ss_pred             EEEEeCC-CHHHhhhhhcccccccceeeeeccHHHH-HHHHHHc---CCe--E--EEeCCC-cCHHHHHHHHc--CCCCc
Confidence            3788887 89999999888888987554 4555433 3444444   222  1  235444 34444444332  24799


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.+.|.
T Consensus        99 ~vid~~G~  106 (174)
T d1f8fa2          99 FALESTGS  106 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCc
Confidence            99999986

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=0.0021  Score=42.12  Aligned_cols=73  Identities=15%  Similarity=0.138  Sum_probs=49.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|.|+ |.+|..+|..|+.+|.  ++++++++.+.+.-.+.+|...   .+........|   .+++           .
T Consensus        22 I~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~~~~-----------~   86 (159)
T d2ldxa1          22 ITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---YNVS-----------A   86 (159)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---GGGG-----------T
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---hhhh-----------c
Confidence            678896 9999999999999874  7999999877666566666532   22222222223   3322           2


Q ss_pred             CccEEEecccccC
Q 035504           77 KLDILVNNAAIFG   89 (174)
Q Consensus        77 ~id~li~~ag~~~   89 (174)
                      .-|++|..||...
T Consensus        87 ~adivvitag~~~   99 (159)
T d2ldxa1          87 NSKLVIITAGARM   99 (159)
T ss_dssp             TEEEEEECCSCCC
T ss_pred             cccEEEEeccccc
Confidence            6899999998743

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.22  E-value=0.0017  Score=41.95  Aligned_cols=73  Identities=12%  Similarity=0.081  Sum_probs=49.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhc---CCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHS---GFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|.|+ |.+|..+|..|+.+|  .++++++.+++.++....++...   .........   .|.+++.           
T Consensus         4 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~~~l~-----------   68 (146)
T d1hyha1           4 IGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWAALA-----------   68 (146)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGGGGT-----------
T ss_pred             EEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec---cCHHHhc-----------
Confidence            678895 899999999999987  47999999877665555555432   222233332   3444432           


Q ss_pred             CccEEEecccccC
Q 035504           77 KLDILVNNAAIFG   89 (174)
Q Consensus        77 ~id~li~~ag~~~   89 (174)
                      .-|++|.+||...
T Consensus        69 ~adiVVitaG~~~   81 (146)
T d1hyha1          69 DADVVISTLGNIK   81 (146)
T ss_dssp             TCSEEEECCSCGG
T ss_pred             cccEEEEeccccc
Confidence            6899999999743

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.21  E-value=0.0034  Score=41.08  Aligned_cols=72  Identities=17%  Similarity=0.154  Sum_probs=50.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhh---cCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKH---SGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|.|+ |.+|..+|..|+.+|.  ++++++++++.+.-.+.++..   ..+.......   .|.+++           .
T Consensus        23 V~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~---~d~~~~-----------~   87 (160)
T d1i0za1          23 ITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD---KDYSVT-----------A   87 (160)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC---SSGGGG-----------T
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec---cchhhc-----------c
Confidence            678896 8999999999999985  799999987766655555543   2222222222   233332           2


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      .-|++|..||..
T Consensus        88 ~adiVVitAg~~   99 (160)
T d1i0za1          88 NSKIVVVTAGVR   99 (160)
T ss_dssp             TCSEEEECCSCC
T ss_pred             cccEEEEecCCc
Confidence            789999999974

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.17  E-value=0.0011  Score=43.84  Aligned_cols=76  Identities=11%  Similarity=0.118  Sum_probs=48.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeChhHHHHHHHHHhhcCCCceeEEEeecC-ChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA-DPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++|.|+ +|+|...+..+...|++ |+.+++++++ .+.++++..   +  .  ..|.. +.+.+.+.+.+.  ..+++
T Consensus        31 tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k-~~~ak~lGa---~--~--~i~~~~~~~~~~~~~~~~--~~~g~   99 (176)
T d2fzwa2          31 VCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDK-FARAKEFGA---T--E--CINPQDFSKPIQEVLIEM--TDGGV   99 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGG-HHHHHHHTC---S--E--EECGGGCSSCHHHHHHHH--TTSCB
T ss_pred             EEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHH-HHHHHHhCC---c--E--EEeCCchhhHHHHHHHHH--cCCCC
Confidence            4789988 59999999988888975 5556655443 455555532   2  1  12332 234455555444  23479


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2fzwa2         100 DYSFECIGN  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             cEeeecCCC
Confidence            999999985

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.16  E-value=0.0085  Score=38.28  Aligned_cols=74  Identities=20%  Similarity=0.131  Sum_probs=48.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeC--hhHHHHHHHHHhh--cCCCceeEEEeecCChhhHHHHHHHHHhh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARD--EKRGLEAVEKLKH--SGFDSVIFHQLDVADPATIHSLADFVRSQ   74 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~--~~~~~~~~~~l~~--~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   74 (174)
                      ++.|.||+|.+|..+|..+..++.  ++++.+..  .+.++-...++..  ....+......|   .+++          
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~~----------   68 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YEDT----------   68 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGGG----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHHh----------
Confidence            367999999999999999999974  69998853  2333333334432  112334443333   3332          


Q ss_pred             cCCccEEEeccccc
Q 035504           75 FGKLDILVNNAAIF   88 (174)
Q Consensus        75 ~g~id~li~~ag~~   88 (174)
                       ..-|++|..||..
T Consensus        69 -~~aDiVvitaG~~   81 (142)
T d1o6za1          69 -AGSDVVVITAGIP   81 (142)
T ss_dssp             -TTCSEEEECCCCC
T ss_pred             -hhcCEEEEecccc
Confidence             2789999999963

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.06  E-value=0.00034  Score=46.37  Aligned_cols=36  Identities=31%  Similarity=0.402  Sum_probs=31.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG   36 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~   36 (174)
                      ++||+||++|+|...+...-..|++|+.+.+++++.
T Consensus        26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~   61 (167)
T d1tt7a2          26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA   61 (167)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHH
Confidence            589999999999999987777899999999986653

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.03  E-value=0.00047  Score=46.12  Aligned_cols=42  Identities=36%  Similarity=0.406  Sum_probs=34.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL   43 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   43 (174)
                      ++||+||+||+|...+...-..|++|+.+.++++.. +.++++
T Consensus        34 ~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~-~~~~~l   75 (177)
T d1o89a2          34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH-EYLKSL   75 (177)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH-HHHHHH
T ss_pred             cEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH-HHHHhh
Confidence            479999999999999998888999999999987653 333444

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.02  E-value=0.0008  Score=44.32  Aligned_cols=71  Identities=23%  Similarity=0.349  Sum_probs=48.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.|+ |++|...+..+-..|+++++++++.++. +.++++   +.+.    ..|..+.+..       .....++|.
T Consensus        33 ~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~-~~a~~l---Gad~----~i~~~~~~~~-------~~~~~~~D~   96 (168)
T d1uufa2          33 KVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKAL---GADE----VVNSRNADEM-------AAHLKSFDF   96 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHH---TCSE----EEETTCHHHH-------HTTTTCEEE
T ss_pred             EEEEecc-chHHHHHHHHhhcccccchhhccchhHH-HHHhcc---CCcE----EEECchhhHH-------HHhcCCCce
Confidence            4788886 8999999988878899999888876643 444444   3221    2344444322       223357999


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      +|.+.|.
T Consensus        97 vid~~g~  103 (168)
T d1uufa2          97 ILNTVAA  103 (168)
T ss_dssp             EEECCSS
T ss_pred             eeeeeec
Confidence            9999985

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.00  E-value=0.0024  Score=42.15  Aligned_cols=76  Identities=13%  Similarity=0.175  Sum_probs=49.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC-hhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD-PATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~g~i   78 (174)
                      +++|.|+ +|+|...+..+...|+ +|+.+++++++. +.++++   +..   . ..|..+ ++.+.+.....  ..+++
T Consensus        31 tVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~-~~a~~~---Ga~---~-~i~~~~~~~~~~~~~~~~--~~~G~   99 (176)
T d2jhfa2          31 TCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKF-AKAKEV---GAT---E-CVNPQDYKKPIQEVLTEM--SNGGV   99 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHT---TCS---E-EECGGGCSSCHHHHHHHH--TTSCB
T ss_pred             EEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHH-HHHHHh---CCe---e-EEecCCchhHHHHHHHHH--hcCCC
Confidence            4799999 7899999999999985 788888886653 344433   211   1 122222 23455544444  33579


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2jhfa2         100 DFSFEVIGR  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEecCCc
Confidence            999999986

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.99  E-value=0.0015  Score=43.46  Aligned_cols=77  Identities=13%  Similarity=0.036  Sum_probs=50.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ +|+|...+..+...|+ +|+.+++++++. +.++++..   + .   ..|..+.+...+.+.+.. ..+++|
T Consensus        32 tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl-~~Ak~~GA---~-~---~in~~~~~~~~~~~~~~~-~g~G~d  101 (176)
T d1d1ta2          32 TCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF-EKAMAVGA---T-E---CISPKDSTKPISEVLSEM-TGNNVG  101 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHHTC---S-E---EECGGGCSSCHHHHHHHH-HTSCCC
T ss_pred             EEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHH-HHHHhcCC---c-E---EECccccchHHHHHHHHh-ccccce
Confidence            4788886 8999999999999995 799999987653 45555532   2 1   223334333222222222 234799


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      .+|.+.|.
T Consensus       102 ~vi~~~g~  109 (176)
T d1d1ta2         102 YTFEVIGH  109 (176)
T ss_dssp             EEEECSCC
T ss_pred             EEEEeCCc
Confidence            99999986

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.98  E-value=0.0029  Score=40.73  Aligned_cols=78  Identities=13%  Similarity=0.141  Sum_probs=48.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++.|.||.|-+|..+++.|.+.|++|.+.+++.....+...+    . .......   .....+...+.++.....+=.+
T Consensus        11 kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~----~-~~~v~~~---~~~~~~~~v~~~~~~~~~~~~i   82 (152)
T d2pv7a2          11 KIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA----N-ADVVIVS---VPINLTLETIERLKPYLTENML   82 (152)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT----T-CSEEEEC---SCGGGHHHHHHHHGGGCCTTSE
T ss_pred             eEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh----h-ccccccc---cchhhheeeeecccccccCCce
Confidence            478999999999999999999999999999976543332211    1 1122222   2334555555555554433234


Q ss_pred             EEeccc
Q 035504           81 LVNNAA   86 (174)
Q Consensus        81 li~~ag   86 (174)
                      ++..+.
T Consensus        83 iiD~~S   88 (152)
T d2pv7a2          83 LADLTS   88 (152)
T ss_dssp             EEECCS
T ss_pred             EEEecc
Confidence            444443

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.97  E-value=0.005  Score=40.09  Aligned_cols=82  Identities=18%  Similarity=0.160  Sum_probs=54.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHH---------hhcCCCceeEEEeecCChhhHHHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL---------KHSGFDSVIFHQLDVADPATIHSLADFVR   72 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l---------~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   72 (174)
                      +.|.|+ |-+|..+|+.|.+.|++|++.+|+++..++..+.-         +.....++.++.+   ..+.++++++++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            567766 99999999999999999999999876555433211         0011112333322   3457888888887


Q ss_pred             hhcCCccEEEecccc
Q 035504           73 SQFGKLDILVNNAAI   87 (174)
Q Consensus        73 ~~~g~id~li~~ag~   87 (174)
                      +...+=.++++.++.
T Consensus        79 ~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          79 PHLSPTAIVTDVASV   93 (165)
T ss_dssp             GGSCTTCEEEECCSC
T ss_pred             hhcccccceeecccc
Confidence            776666677766654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.97  E-value=0.0065  Score=40.11  Aligned_cols=84  Identities=11%  Similarity=0.099  Sum_probs=59.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHh---------------hcCCCceeEEEeecCChhhHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLK---------------HSGFDSVIFHQLDVADPATIHS   66 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~---------------~~~~~~~~~~~~Dv~~~~~i~~   66 (174)
                      +-|.|. |-+|.++|++|++.|++|++.+|+++..++..++-.               ..- .....+...+.+.+.+..
T Consensus         5 Ig~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~-~~~~~ii~~~~~~~~v~~   82 (176)
T d2pgda2           5 IALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKL-KKPRRIILLVKAGQAVDN   82 (176)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHB-CSSCEEEECSCTTHHHHH
T ss_pred             EEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhh-cccceEEEecCchHHHHH
Confidence            445665 889999999999999999999999877666543211               110 123445556677788888


Q ss_pred             HHHHHHhhcCCccEEEecccc
Q 035504           67 LADFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus        67 ~~~~~~~~~g~id~li~~ag~   87 (174)
                      ..+.+.....+=+++|.....
T Consensus        83 v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          83 FIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHhccccCcEEEecCcc
Confidence            888887776665677777644

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.94  E-value=0.0091  Score=38.58  Aligned_cols=78  Identities=18%  Similarity=0.176  Sum_probs=43.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-------eEEEEeeChhH--HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-------IVVLTARDEKR--GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-------~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      .+.|+||+|.+|..++..|++.+.       .+++.+.+...  ++....++.............  .+  +..+     
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~--~~~~-----   75 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--TD--KEEI-----   75 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--ES--CHHH-----
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--Cc--cccc-----
Confidence            378999999999999999987542       35555554332  222222333222122222222  11  1111     


Q ss_pred             HhhcCCccEEEecccccC
Q 035504           72 RSQFGKLDILVNNAAIFG   89 (174)
Q Consensus        72 ~~~~g~id~li~~ag~~~   89 (174)
                        .+...|++|..+|...
T Consensus        76 --~~~~~dvVVitag~~~   91 (154)
T d5mdha1          76 --AFKDLDVAILVGSMPR   91 (154)
T ss_dssp             --HTTTCSEEEECCSCCC
T ss_pred             --ccCCceEEEEecccCC
Confidence              2237899999998744

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.94  E-value=0.0073  Score=38.49  Aligned_cols=73  Identities=22%  Similarity=0.143  Sum_probs=48.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhh---cCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKH---SGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|.|+ |.+|..++..|+..|  .++++.+.+++..+-...++..   ....+..+...  .|.+++           .
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~~-----------~   68 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYADT-----------A   68 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGGG-----------T
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHHh-----------c
Confidence            678896 899999999999997  4799999887654443333322   11122333322  233332           2


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      ..|++|.++|..
T Consensus        69 dadvvvitag~~   80 (142)
T d1guza1          69 NSDIVIITAGLP   80 (142)
T ss_dssp             TCSEEEECCSCC
T ss_pred             CCeEEEEEEecC
Confidence            789999999873

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.89  E-value=0.0036  Score=41.47  Aligned_cols=76  Identities=12%  Similarity=0.143  Sum_probs=49.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecC-ChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVA-DPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-~~~~i~~~~~~~~~~~g~i   78 (174)
                      +++|.|+ ++||...+..+-..|+ +|+++++++++ .+.++++..   +  .+  .|.. .++.........  ..+++
T Consensus        31 ~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r-~~~a~~~Ga---~--~~--i~~~~~~~~~~~~~~~~--~~~G~   99 (174)
T d1e3ia2          31 TCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEK-FPKAKALGA---T--DC--LNPRELDKPVQDVITEL--TAGGV   99 (174)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG-HHHHHHTTC---S--EE--ECGGGCSSCHHHHHHHH--HTSCB
T ss_pred             EEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHH-HHHHHHhCC---C--cc--cCCccchhhhhhhHhhh--hcCCC
Confidence            4788975 9999999999999998 47777777654 455555421   2  11  2322 223444444443  33589


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.++|.
T Consensus       100 d~vie~~G~  108 (174)
T d1e3ia2         100 DYSLDCAGT  108 (174)
T ss_dssp             SEEEESSCC
T ss_pred             cEEEEeccc
Confidence            999999986

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.89  E-value=0.0063  Score=38.95  Aligned_cols=72  Identities=25%  Similarity=0.230  Sum_probs=48.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhh---cCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKH---SGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|.|+ |.+|..+|..++.+|.  ++++++.+++.++-...+++.   ..+. ......  .+.+++.           
T Consensus         4 i~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~-~~i~~~--~~~~~~~-----------   68 (143)
T d1llda1           4 LAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPT-VSIDGS--DDPEICR-----------   68 (143)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTT-CEEEEE--SCGGGGT-----------
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCC-ceeecC--CCHHHhh-----------
Confidence            678897 9999999999999984  799999987765554444543   2222 233222  2333322           


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      .-|++|..+|..
T Consensus        69 daDvVVitaG~~   80 (143)
T d1llda1          69 DADMVVITAGPR   80 (143)
T ss_dssp             TCSEEEECCCCC
T ss_pred             CCcEEEEecccc
Confidence            679999999974

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.87  E-value=0.0064  Score=38.87  Aligned_cols=73  Identities=15%  Similarity=0.137  Sum_probs=46.2

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhcCC--CceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHSGF--DSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      ++.|.|+ |.+|..++..++.++.  ++++++++++.++-...++.....  .......   .++++           ..
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~---~~~~~-----------~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GDYSD-----------VK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG-----------GT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEee---CcHHH-----------hC
Confidence            4678897 9999999999999874  799999987665555555553211  1122221   13332           23


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      .-|++|..||..
T Consensus        68 ~adivvitag~~   79 (142)
T d1y6ja1          68 DCDVIVVTAGAN   79 (142)
T ss_dssp             TCSEEEECCCC-
T ss_pred             CCceEEEecccc
Confidence            689999999874

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.75  E-value=0.012  Score=37.54  Aligned_cols=73  Identities=19%  Similarity=0.059  Sum_probs=47.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhh---cCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKH---SGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|.|+ |.+|.++|..|+.++. ++++++.+++.++....++..   ..+....+..+  .|.+++.           .
T Consensus         4 I~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~~-----------~   69 (142)
T d1uxja1           4 ISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADTA-----------N   69 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGGT-----------T
T ss_pred             EEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHhc-----------C
Confidence            568886 9999999999998874 899999877655544444432   11122333322  2333322           6


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      -|++|.+||..
T Consensus        70 advvvitag~~   80 (142)
T d1uxja1          70 SDVIVVTSGAP   80 (142)
T ss_dssp             CSEEEECCSCC
T ss_pred             CCEEEEeeecc
Confidence            79999999974

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.75  E-value=0.0019  Score=42.69  Aligned_cols=39  Identities=26%  Similarity=0.085  Sum_probs=32.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV   40 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   40 (174)
                      ++.|.|+ |.+|.++|..|+++|++|.+.+|+++..++..
T Consensus         3 ~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~   41 (184)
T d1bg6a2           3 TYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ   41 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            3678887 99999999999999999999999876655443

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.67  E-value=0.028  Score=36.07  Aligned_cols=74  Identities=14%  Similarity=0.120  Sum_probs=49.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhh---cCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKH---SGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|.|+ |.+|..++..|.+++. ++++++++++.++..+.++..   ..+.+..+...+  +++++           ..
T Consensus         6 I~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~~-----------~~   71 (150)
T d1t2da1           6 IVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDDL-----------AG   71 (150)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGGG-----------TT
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccccc-----------CC
Confidence            678896 8999999998888874 799999887665555554432   112233343332  33332           27


Q ss_pred             ccEEEecccccC
Q 035504           78 LDILVNNAAIFG   89 (174)
Q Consensus        78 id~li~~ag~~~   89 (174)
                      -|++|.++|...
T Consensus        72 advvvitag~~~   83 (150)
T d1t2da1          72 ADVVIVTAGFTK   83 (150)
T ss_dssp             CSEEEECCSCSS
T ss_pred             CcEEEEeccccc
Confidence            899999999744

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.65  E-value=0.02  Score=37.52  Aligned_cols=73  Identities=19%  Similarity=0.221  Sum_probs=53.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|+ +-.|+.-++...+.|++|.+.+.+.+..++....+..    .+   ..-.++++.+++.+.       ..|++
T Consensus        35 V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~----~~---~~~~~~~~~l~~~~~-------~aDiv   99 (168)
T d1pjca1          35 VVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----RV---ELLYSNSAEIETAVA-------EADLL   99 (168)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----GS---EEEECCHHHHHHHHH-------TCSEE
T ss_pred             EEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc----cc---eeehhhhhhHHHhhc-------cCcEE
Confidence            677777 7789999999999999999999998776655444432    22   233456666665555       67999


Q ss_pred             EecccccC
Q 035504           82 VNNAAIFG   89 (174)
Q Consensus        82 i~~ag~~~   89 (174)
                      |.++-+.+
T Consensus       100 I~aalipG  107 (168)
T d1pjca1         100 IGAVLVPG  107 (168)
T ss_dssp             EECCCCTT
T ss_pred             EEeeecCC
Confidence            99997644

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.61  E-value=0.0082  Score=39.01  Aligned_cols=74  Identities=18%  Similarity=0.299  Sum_probs=45.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.|+ +++|...+..+-..|++|+.+++++.+. +.++++   +.+.    ..|.++++..+++.    +..++.+.
T Consensus        30 ~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~-~~a~~~---Ga~~----~i~~~~~~~~~~~~----~~~~g~~~   96 (166)
T d1llua2          30 WVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKL-ELARKL---GASL----TVNARQEDPVEAIQ----RDIGGAHG   96 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHT---TCSE----EEETTTSCHHHHHH----HHHSSEEE
T ss_pred             EEEEeec-cccHHHHHHHHHHcCCccceecchhhHH-Hhhhcc---Cccc----cccccchhHHHHHH----HhhcCCcc
Confidence            4788776 9999999888888899999999886653 333333   3221    23555555444332    23344555


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      .|.+++.
T Consensus        97 ~i~~~~~  103 (166)
T d1llua2          97 VLVTAVS  103 (166)
T ss_dssp             EEECCSC
T ss_pred             ccccccc
Confidence            5555543

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.59  E-value=0.0095  Score=37.90  Aligned_cols=73  Identities=22%  Similarity=0.154  Sum_probs=48.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhhc--CCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKHS--GFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|.|+ |.+|..++..++.++  .++++.+.+++.++-...++...  ...+......   |.+++           ..
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~~~-----------~~   67 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYADL-----------KG   67 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGGGG-----------TT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC---cHHHh-----------cC
Confidence            568897 889999999999887  47999999877665554444331  1112333332   33333           26


Q ss_pred             ccEEEecccccC
Q 035504           78 LDILVNNAAIFG   89 (174)
Q Consensus        78 id~li~~ag~~~   89 (174)
                      -|++|.++|...
T Consensus        68 adivvitag~~~   79 (140)
T d1a5za1          68 SDVVIVAAGVPQ   79 (140)
T ss_dssp             CSEEEECCCCCC
T ss_pred             CCEEEEeccccc
Confidence            899999999743

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.55  E-value=0.018  Score=37.19  Aligned_cols=75  Identities=16%  Similarity=-0.023  Sum_probs=47.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHHhh---cCCCceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKLKH---SGFDSVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.|.|+ |.+|..+|..|...+ .++++++.+++.++-.+.++..   ...........  ++.   +..++       .
T Consensus        10 I~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~---~~~~~-------~   76 (154)
T d1pzga1          10 VAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSY---EAALT-------G   76 (154)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSH---HHHHT-------T
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cch---hhhhc-------C
Confidence            678897 999999999888888 4899999887655555444432   12121222211  121   22222       7


Q ss_pred             ccEEEecccccC
Q 035504           78 LDILVNNAAIFG   89 (174)
Q Consensus        78 id~li~~ag~~~   89 (174)
                      -|++|..+|...
T Consensus        77 adiVvitag~~~   88 (154)
T d1pzga1          77 ADCVIVTAGLTK   88 (154)
T ss_dssp             CSEEEECCSCSS
T ss_pred             CCeEEEeccccc
Confidence            899999999754

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.52  E-value=0.011  Score=38.99  Aligned_cols=73  Identities=15%  Similarity=0.189  Sum_probs=49.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCc-eeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDS-VIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      ++|.|+ ||.+++++..|.+.| +|.+..|+.+++++..+.+......+ ...+  ++.+.+.          .....|+
T Consensus        21 vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~--~~~~~~~----------~~~~~dl   86 (177)
T d1nvta1          21 IVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEV--KFSGLDV----------DLDGVDI   86 (177)
T ss_dssp             EEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHE--EEECTTC----------CCTTCCE
T ss_pred             EEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhh--hhhhhhh----------ccchhhh
Confidence            677876 789999999998776 99999999988888888776543221 1111  1111111          2236899


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      +||+....
T Consensus        87 iIn~tp~g   94 (177)
T d1nvta1          87 IINATPIG   94 (177)
T ss_dssp             EEECSCTT
T ss_pred             hccCCccc
Confidence            99988664

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.52  E-value=0.0052  Score=39.96  Aligned_cols=85  Identities=11%  Similarity=0.117  Sum_probs=53.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC------CceeEEEeecCChhhHHHHH---HHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF------DSVIFHQLDVADPATIHSLA---DFVR   72 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dv~~~~~i~~~~---~~~~   72 (174)
                      +-|.|. |-+|..+|+.|+++|++|++.+|+++..++..+.-.....      .+..++-.-|.+.++++.++   +.+.
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            345555 8999999999999999999999997765554331100000      12344555667777777766   3344


Q ss_pred             hhcCCccEEEecccc
Q 035504           73 SQFGKLDILVNNAAI   87 (174)
Q Consensus        73 ~~~g~id~li~~ag~   87 (174)
                      ....+=+++|.+...
T Consensus        82 ~~~~~g~iiid~sT~   96 (161)
T d1vpda2          82 EGAKPGTVLIDMSSI   96 (161)
T ss_dssp             HHCCTTCEEEECSCC
T ss_pred             hccCCCCEEEECCCC
Confidence            444444566666543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.51  E-value=0.041  Score=34.88  Aligned_cols=73  Identities=18%  Similarity=0.052  Sum_probs=48.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCC--CeEEEEeeChhHHHHHHHHHhh---cCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNG--IIVVLTARDEKRGLEAVEKLKH---SGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|.|+ |.+|..+|..++.+|  .++++++.+++.++-...+++.   ..+........  .|.+++.           
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~~~-----------   68 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLLK-----------   68 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGGGT-----------
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHHhc-----------
Confidence            578896 999999999999887  3699999987765554444532   12222333322  1333332           


Q ss_pred             CccEEEeccccc
Q 035504           77 KLDILVNNAAIF   88 (174)
Q Consensus        77 ~id~li~~ag~~   88 (174)
                      .-|++|..+|..
T Consensus        69 ~adiVvitag~~   80 (142)
T d1ojua1          69 GSEIIVVTAGLA   80 (142)
T ss_dssp             TCSEEEECCCCC
T ss_pred             cccEEEEecccc
Confidence            689999999864

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.39  E-value=0.0041  Score=41.13  Aligned_cols=76  Identities=18%  Similarity=0.182  Sum_probs=48.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhh-HHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT-IHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~-i~~~~~~~~~~~g~i   78 (174)
                      +++|.|+ +|+|...+..+...|+ +|+.+++++++. +.++++   +.+  .  ..|..+.+. +.+.....  .-+++
T Consensus        30 ~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl-~~a~~l---Ga~--~--~i~~~~~d~~~~~~~~~~--~~~G~   98 (174)
T d1p0fa2          30 TCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF-PKAIEL---GAT--E--CLNPKDYDKPIYEVICEK--TNGGV   98 (174)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHT---TCS--E--EECGGGCSSCHHHHHHHH--TTSCB
T ss_pred             EEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHH-HHHHHc---CCc--E--EEcCCCchhHHHHHHHHh--cCCCC
Confidence            4789986 8999999999998997 688888876653 334444   222  1  134433332 33333322  23479


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|-++|.
T Consensus        99 d~vid~~g~  107 (174)
T d1p0fa2          99 DYAVECAGR  107 (174)
T ss_dssp             SEEEECSCC
T ss_pred             cEEEEcCCC
Confidence            999999986

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.004  Score=41.91  Aligned_cols=39  Identities=23%  Similarity=0.229  Sum_probs=32.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVE   41 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   41 (174)
                      +.|.|+ |-+|..+|..+++.|++|++.+++++.+++..+
T Consensus         7 vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~   45 (192)
T d1f0ya2           7 VTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   45 (192)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHh
Confidence            678888 789999999999999999999999876554433

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.33  E-value=0.012  Score=38.56  Aligned_cols=75  Identities=19%  Similarity=0.327  Sum_probs=45.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +++|.|+ +++|...+..+...|+ +|+.+++++++ .+.++++   +.+  .+  .|. +++.++...+..  ...++|
T Consensus        35 ~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k-~~~~~~~---ga~--~~--i~~-~~~~~~~~~~~~--~~~g~d  102 (172)
T d1h2ba2          35 YVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEK-LKLAERL---GAD--HV--VDA-RRDPVKQVMELT--RGRGVN  102 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHH-HHHHHHT---TCS--EE--EET-TSCHHHHHHHHT--TTCCEE
T ss_pred             EEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHH-HHHHhhc---ccc--ee--ecC-cccHHHHHHHhh--CCCCce
Confidence            3678875 9999998888877786 56666766543 2333332   322  11  233 334444433321  223699


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      ++|.++|.
T Consensus       103 ~vid~~g~  110 (172)
T d1h2ba2         103 VAMDFVGS  110 (172)
T ss_dssp             EEEESSCC
T ss_pred             EEEEecCc
Confidence            99999986

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.25  E-value=0.0078  Score=39.46  Aligned_cols=76  Identities=16%  Similarity=0.209  Sum_probs=46.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhh-HHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPAT-IHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~-i~~~~~~~~~~~g~i   78 (174)
                      +++|.|+ +|+|...+..+...|+ +|+.+++++++ .+.++++   +.+  .  ..|..++++ .++.....  ..+++
T Consensus        31 ~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~r-l~~a~~~---GAd--~--~in~~~~~~~~~~~~~~~--~~~G~   99 (175)
T d1cdoa2          31 TCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDK-FEKAKVF---GAT--D--FVNPNDHSEPISQVLSKM--TNGGV   99 (175)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG-HHHHHHT---TCC--E--EECGGGCSSCHHHHHHHH--HTSCB
T ss_pred             EEEEEec-CCccchHHHHHHHHhhchheeecchHHH-HHHHHHc---CCc--E--EEcCCCcchhHHHHHHhh--ccCCc
Confidence            4788886 7788888888888876 57778877654 3444444   222  1  224434333 33333322  22479


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      |++|.+.|.
T Consensus       100 d~vid~~G~  108 (175)
T d1cdoa2         100 DFSLECVGN  108 (175)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeeecCC
Confidence            999999986

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.21  E-value=0.0055  Score=40.22  Aligned_cols=42  Identities=21%  Similarity=0.321  Sum_probs=35.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKL   43 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l   43 (174)
                      .++|.|+ ||.+++++..|.+.|+ ++.++.|+.+..+++.+.+
T Consensus        19 ~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          19 KVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             CEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            3788877 9999999999999997 6999999988777666554

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.17  E-value=0.0026  Score=44.01  Aligned_cols=70  Identities=17%  Similarity=0.156  Sum_probs=46.5

Q ss_pred             CCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEeccc
Q 035504            7 ANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAA   86 (174)
Q Consensus         7 a~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~ag   86 (174)
                      .||-.|.++|+.+.++|++|.++.-....          ..+..+..+  .+.+.   +++...+.+.+...|++|++|+
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------~~p~~~~~~--~~~t~---~~m~~~~~~~~~~~D~~i~aAA   94 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSL----------PTPPFVKRV--DVMTA---LEMEAAVNASVQQQNIFIGCAA   94 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCC----------CCCTTEEEE--ECCSH---HHHHHHHHHHGGGCSEEEECCB
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhccccc----------Ccccccccc--eehhh---HHHHHHHHhhhccceeEeeeec
Confidence            35789999999999999999988654321          112224333  33343   4444445555567899999999


Q ss_pred             ccCcc
Q 035504           87 IFGVS   91 (174)
Q Consensus        87 ~~~~~   91 (174)
                      +....
T Consensus        95 vsDf~   99 (223)
T d1u7za_          95 VADYR   99 (223)
T ss_dssp             CCSEE
T ss_pred             hhhhh
Confidence            97654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.96  E-value=0.007  Score=40.42  Aligned_cols=39  Identities=26%  Similarity=0.215  Sum_probs=32.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAV   40 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   40 (174)
                      ++.|.|+ |-+|..+|..+++.|++|++.+++++..++..
T Consensus         6 ~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           6 QAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGL   44 (186)
T ss_dssp             SEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhh
Confidence            3678888 88999999999999999999999977655443

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.86  E-value=0.049  Score=35.56  Aligned_cols=82  Identities=22%  Similarity=0.201  Sum_probs=51.6

Q ss_pred             EEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC-----------------CceeEEEeecCChhhHH
Q 035504            3 VVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-----------------DSVIFHQLDVADPATIH   65 (174)
Q Consensus         3 litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-----------------~~~~~~~~Dv~~~~~i~   65 (174)
                      -|.| .|-+|.++|++|++.|++|.+.+|++++.++..++-.....                 .....+..-+.+...+.
T Consensus         5 GvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (178)
T d1pgja2           5 GVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATD   83 (178)
T ss_dssp             EEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHH
T ss_pred             EEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhh
Confidence            3444 48899999999999999999999998877666554321110                 01122333344555566


Q ss_pred             HHHHHHHhhcCCccEEEecc
Q 035504           66 SLADFVRSQFGKLDILVNNA   85 (174)
Q Consensus        66 ~~~~~~~~~~g~id~li~~a   85 (174)
                      ..+..+.....+=+++++..
T Consensus        84 ~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          84 STIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHHHHCCTTCEEEECC
T ss_pred             hhhhhhhhhccccceecccC
Confidence            66666666555545666555

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.83  E-value=0.0052  Score=40.21  Aligned_cols=73  Identities=18%  Similarity=0.257  Sum_probs=46.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +++|.|+ |++|...+..+-..|++|+++++++++.+ .++++   +.+ . +  .|..++++..      .+..+++|.
T Consensus        30 ~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~-~a~~l---Ga~-~-~--i~~~~~~~~~------~~~~~~~d~   94 (168)
T d1piwa2          30 KVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE-DAMKM---GAD-H-Y--IATLEEGDWG------EKYFDTFDL   94 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHH---TCS-E-E--EEGGGTSCHH------HHSCSCEEE
T ss_pred             EEEEECC-CCcchhHHHHhhhccccccccccchhHHH-Hhhcc---CCc-E-E--eeccchHHHH------Hhhhcccce
Confidence            4788887 89999988777778999999999876543 34444   322 1 1  2333322221      223457899


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      ++.+.|..
T Consensus        95 vi~~~~~~  102 (168)
T d1piwa2          95 IVVCASSL  102 (168)
T ss_dssp             EEECCSCS
T ss_pred             EEEEecCC
Confidence            99988753

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.74  E-value=0.036  Score=35.69  Aligned_cols=35  Identities=20%  Similarity=0.335  Sum_probs=28.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG   36 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~   36 (174)
                      +++|.|+ |++|...+..+...|++|+++++++++.
T Consensus        30 ~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~   64 (168)
T d1rjwa2          30 WVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL   64 (168)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             EEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHh
Confidence            3678765 9999999888888999999999887654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.66  E-value=0.0049  Score=39.91  Aligned_cols=33  Identities=21%  Similarity=0.114  Sum_probs=29.9

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK   34 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~   34 (174)
                      +++|.|+ |.+|..++..|++.|++|.++.|+..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            3788888 99999999999999999999999764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.65  E-value=0.04  Score=35.54  Aligned_cols=85  Identities=8%  Similarity=0.003  Sum_probs=50.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC------CCceeEEEeecCChhhHHHHHHH---HH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG------FDSVIFHQLDVADPATIHSLADF---VR   72 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dv~~~~~i~~~~~~---~~   72 (174)
                      +-+.| .|-+|.++|++|+++|++|.+.+|+.+..++..+.-....      ......+..-+.+.+.++.++..   +.
T Consensus         4 Ig~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~~   82 (162)
T d3cuma2           4 IAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLL   82 (162)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCHH
T ss_pred             EEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccccc
Confidence            34454 4889999999999999999999998766544332110000      01234555556666666666543   33


Q ss_pred             hhcCCccEEEecccc
Q 035504           73 SQFGKLDILVNNAAI   87 (174)
Q Consensus        73 ~~~g~id~li~~ag~   87 (174)
                      ....+=+++|.+...
T Consensus        83 ~~l~~g~iiid~st~   97 (162)
T d3cuma2          83 AHIAPGTLVLECSTI   97 (162)
T ss_dssp             HHSCTTCEEEECSCC
T ss_pred             ccCCCCCEEEECCCC
Confidence            333333466655543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.022  Score=42.96  Aligned_cols=31  Identities=32%  Similarity=0.532  Sum_probs=26.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      .+||.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        39 kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          39 KVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             CEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            4789998 8899999999999997 68888664

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.42  E-value=0.042  Score=35.11  Aligned_cols=41  Identities=15%  Similarity=0.241  Sum_probs=32.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKL   43 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   43 (174)
                      +.+.|+ |-+|.++++.|.+.|+++++..|+.+..++..+++
T Consensus         3 Ig~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            345554 89999999999999999999999977766655544

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=95.20  E-value=0.11  Score=35.17  Aligned_cols=76  Identities=14%  Similarity=0.069  Sum_probs=57.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      .+|..|+++|--.++..+++  |.+|+.+.++++-.....+.+.+.+..++.+...|..+-.          ...++.|.
T Consensus        81 ~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~~pfD~  148 (215)
T d1jg1a_          81 NILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPKAPYDV  148 (215)
T ss_dssp             CEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCCEEE
T ss_pred             eEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------cccCccee
Confidence            47889998888888877776  4679999998766666666677777678999999986422          13358999


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      ++.+++..
T Consensus       149 Iiv~~a~~  156 (215)
T d1jg1a_         149 IIVTAGAP  156 (215)
T ss_dssp             EEECSBBS
T ss_pred             EEeecccc
Confidence            99888763

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.20  E-value=0.046  Score=33.01  Aligned_cols=33  Identities=15%  Similarity=0.181  Sum_probs=28.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK   34 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~   34 (174)
                      +++|.|+ |.+|..-++.|++.|++|++++....
T Consensus        14 ~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1          14 DCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            3788888 66999999999999999999887544

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.17  E-value=0.065  Score=38.15  Aligned_cols=25  Identities=16%  Similarity=0.183  Sum_probs=22.2

Q ss_pred             CCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            8 NKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         8 ~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      ||..|.++|+.+.++|++|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            5678999999999999999998754

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.11  E-value=0.024  Score=37.39  Aligned_cols=32  Identities=22%  Similarity=0.229  Sum_probs=27.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEK   34 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~   34 (174)
                      +.|.|+ |.+|.++|..|++.|++|.+.+|..+
T Consensus         3 I~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           3 VSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            567776 89999999999999999999998644

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.07  E-value=0.096  Score=36.03  Aligned_cols=31  Identities=29%  Similarity=0.467  Sum_probs=26.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      +++|.|+ ||+|..++..|++.|. ++.+++.+
T Consensus        32 ~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          32 RVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            4788885 8999999999999997 68888654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.03  E-value=0.26  Score=32.68  Aligned_cols=35  Identities=14%  Similarity=0.025  Sum_probs=28.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL   37 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   37 (174)
                      +.|.| .|-+|..+|..|++.|++|++.+.+.+..+
T Consensus         3 I~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~   37 (202)
T d1mv8a2           3 ISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKID   37 (202)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             EEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHH
Confidence            45665 499999999999999999999998865433

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.94  E-value=0.088  Score=34.77  Aligned_cols=81  Identities=21%  Similarity=0.180  Sum_probs=48.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCCh---------------hhHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADP---------------ATIHS   66 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~---------------~~i~~   66 (174)
                      ++|.|| +-.|..-++...+.|++|.+.+.+....++..    +.++.   ++..+..+.               +..+.
T Consensus        32 VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~----~l~~~---~i~~~~~~~~~~~~~~gyA~~~s~~~~~~  103 (183)
T d1l7da1          32 VLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE----SLGGK---FITVDDEAMKTAETAGGYAKEMGEEFRKK  103 (183)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH----HTTCE---ECCC-----------------------CC
T ss_pred             EEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH----Hhhcc---eEEEeccccccccccccchhhcCHHHHHH
Confidence            677777 78899999999999999999999876544433    22222   111111111               11111


Q ss_pred             HHHHHHhhcCCccEEEecccccCc
Q 035504           67 LADFVRSQFGKLDILVNNAAIFGV   90 (174)
Q Consensus        67 ~~~~~~~~~g~id~li~~ag~~~~   90 (174)
                      .-+.+.+.....|++|..+-+.+.
T Consensus       104 ~~~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1         104 QAEAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             HHHHHHHHHTTCSEEEECCCCTTS
T ss_pred             HHHHHHHHHHhhhhheeeeecCCc
Confidence            223344445689999999977543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.86  E-value=0.29  Score=35.02  Aligned_cols=69  Identities=19%  Similarity=0.173  Sum_probs=46.0

Q ss_pred             CCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEeccc
Q 035504            8 NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAA   86 (174)
Q Consensus         8 ~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~ag   86 (174)
                      +||++.+    +++.+.+|+.++.++...+...+.++..+-+++.++..|..+      +.++..+....+|.+|.+.-
T Consensus       156 tG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~~~~fD~Vi~DpP  224 (318)
T d1wxxa2         156 AGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKEGERFDLVVLDPP  224 (318)
T ss_dssp             TTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHTTCCEEEEEECCC
T ss_pred             CcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhhhcCCCEEEEcCC
Confidence            4555444    344567899999998776666666666665668888887543      33344445568999999874

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.76  E-value=0.019  Score=38.32  Aligned_cols=36  Identities=22%  Similarity=0.119  Sum_probs=30.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLE   38 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   38 (174)
                      +.|.|+ |..|.++|..|++.|++|.+.+|+++..++
T Consensus        10 I~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~   45 (189)
T d1n1ea2          10 AVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRL   45 (189)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHH
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHH
Confidence            567777 779999999999999999999998765444

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.70  E-value=0.028  Score=35.89  Aligned_cols=41  Identities=12%  Similarity=0.207  Sum_probs=33.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCC-CeEEEEeeChhHHHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNG-IIVVLTARDEKRGLEAVEKL   43 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l   43 (174)
                      +.+.|+ |-+|.++++.|.+.| +++++.+|+++..++..+++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            456776 999999999999887 89999999987766665543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.51  E-value=0.033  Score=34.48  Aligned_cols=68  Identities=19%  Similarity=0.198  Sum_probs=45.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      ++|.|. +.+|..+++.|  +|.+++++..+++..+..    ..   .++.++..|.++++.++++      .....+.+
T Consensus         3 ivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~----~~---~~~~~i~Gd~~~~~~L~~a------~i~~A~~v   66 (129)
T d2fy8a1           3 VVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKV----LR---SGANFVHGDPTRVSDLEKA------NVRGARAV   66 (129)
T ss_dssp             EEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHH----HH---TTCEEEESCTTSHHHHHHT------TCTTCSEE
T ss_pred             EEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHH----Hh---cCccccccccCCHHHHHHh------hhhcCcEE
Confidence            567765 78999999998  466788888776654333    22   2378888999988766531      23356677


Q ss_pred             Eecc
Q 035504           82 VNNA   85 (174)
Q Consensus        82 i~~a   85 (174)
                      |.+.
T Consensus        67 i~~~   70 (129)
T d2fy8a1          67 IVNL   70 (129)
T ss_dssp             EECC
T ss_pred             EEec
Confidence            7655

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.47  E-value=0.2  Score=31.33  Aligned_cols=76  Identities=16%  Similarity=0.241  Sum_probs=52.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHC-CCeEEEE-eeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCc
Q 035504            1 YAVVTGANKGIGYETVRQLASN-GIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKL   78 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~-g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   78 (174)
                      ++.|.|++|-+|+++++.+.+. +++++.. ++.. ...    .+.....+    +..|+|.++.+.+.++.+.+.  ++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~----~~~~~~~D----vvIDFS~p~~~~~~~~~~~~~--~~   69 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLS----LLTDGNTE----VVIDFTHPDVVMGNLEFLIDN--GI   69 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTH----HHHTTTCS----EEEECCCTTTHHHHHHHHHHT--TC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chh----hhccccCC----EEEEcccHHHHHHHHHHHHhc--CC
Confidence            4789999999999999988775 5676543 3322 111    12222222    578999999999999887755  45


Q ss_pred             cEEEecccc
Q 035504           79 DILVNNAAI   87 (174)
Q Consensus        79 d~li~~ag~   87 (174)
                      -.|+-..|.
T Consensus        70 ~~ViGTTG~   78 (135)
T d1yl7a1          70 HAVVGTTGF   78 (135)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEecccc
Confidence            678777765

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.43  E-value=0.16  Score=34.17  Aligned_cols=76  Identities=17%  Similarity=0.213  Sum_probs=53.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      +|-.|+++|.-.++..++.....+|+.+..+++..+...+.+...+..++.+...|..+..          ...+++|.+
T Consensus        79 VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~fD~I  148 (213)
T d1dl5a1          79 VLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSPYDVI  148 (213)
T ss_dssp             EEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCCEEEE
T ss_pred             EEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccchhhh
Confidence            6778888776666555555556689999999877766677777666667777777754321          123479999


Q ss_pred             Eecccc
Q 035504           82 VNNAAI   87 (174)
Q Consensus        82 i~~ag~   87 (174)
                      +.+++.
T Consensus       149 ~~~~~~  154 (213)
T d1dl5a1         149 FVTVGV  154 (213)
T ss_dssp             EECSBB
T ss_pred             hhhccH
Confidence            988865

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.33  E-value=0.2  Score=31.75  Aligned_cols=84  Identities=12%  Similarity=0.103  Sum_probs=52.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC-----CceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-----DSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +-+.|. |-+|..+|++|++.|+.+ ..+|+.++..+..++......     .....+-..+.+.+.+......+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            456666 889999999999988765 577776666555554322100     1123334445566677777777766665


Q ss_pred             CccEEEecccc
Q 035504           77 KLDILVNNAAI   87 (174)
Q Consensus        77 ~id~li~~ag~   87 (174)
                      +-..+|.++..
T Consensus        81 ~~~~iid~sT~   91 (156)
T d2cvza2          81 EGTYWVDATSG   91 (156)
T ss_dssp             TTEEEEECSCC
T ss_pred             ccccccccccC
Confidence            55666666543

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.18  E-value=0.32  Score=31.37  Aligned_cols=58  Identities=14%  Similarity=0.005  Sum_probs=38.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC------------CCceeEEEeecCChh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG------------FDSVIFHQLDVADPA   62 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dv~~~~   62 (174)
                      ||..|++.|   ..+..|+++|++|+.++.++...+...+..+...            +....++..|..+..
T Consensus        24 vLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~   93 (201)
T d1pjza_          24 VLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   93 (201)
T ss_dssp             EEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             EEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence            678888766   3666889999999999999776555444443221            123566777776644

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=94.14  E-value=0.027  Score=32.90  Aligned_cols=33  Identities=15%  Similarity=0.171  Sum_probs=28.4

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK   34 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~   34 (174)
                      +++|.|. +..|.++|+.|.++|++|.+.+.+..
T Consensus         7 ~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           7 NVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             EEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            4788888 66799999999999999999988644

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.10  E-value=0.05  Score=34.55  Aligned_cols=31  Identities=19%  Similarity=0.375  Sum_probs=27.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      ++||.|| |.+|..-++.|++.|++|.+++..
T Consensus        15 rvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          15 RILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3789998 669999999999999999999764

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.05  E-value=0.062  Score=36.80  Aligned_cols=70  Identities=13%  Similarity=0.068  Sum_probs=48.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      +|=.|++.|.   ++..|+++|.+|+.++.+++-.+...+.+...+. ++.++..|+.+.+.           .+.+|.+
T Consensus        41 vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~-~v~~~~~d~~~~~~-----------~~~fD~i  105 (246)
T d1y8ca_          41 YLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNI-----------NRKFDLI  105 (246)
T ss_dssp             EEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCC-----------SCCEEEE
T ss_pred             EEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCc-cceeeccchhhhcc-----------ccccccc
Confidence            4556777665   6778888999999999887655544444554443 58888888876431           2478988


Q ss_pred             Eeccc
Q 035504           82 VNNAA   86 (174)
Q Consensus        82 i~~ag   86 (174)
                      ++.-+
T Consensus       106 ~~~~~  110 (246)
T d1y8ca_         106 TCCLD  110 (246)
T ss_dssp             EECTT
T ss_pred             ceeee
Confidence            86543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.01  E-value=0.16  Score=31.37  Aligned_cols=72  Identities=17%  Similarity=0.315  Sum_probs=52.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEE-eeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLT-ARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +.|.|++|-+|+++++.+.++|++++.. +++..+      .+.  ..+    +..|+|.++...+.++.+.+.  ++-.
T Consensus         3 i~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~~--~~D----VvIDFS~p~~~~~~l~~~~~~--~~p~   68 (128)
T d1vm6a3           3 YGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------ELD--SPD----VVIDFSSPEALPKTVDLCKKY--RAGL   68 (128)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------ECS--CCS----EEEECSCGGGHHHHHHHHHHH--TCEE
T ss_pred             EEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hhc--cCC----EEEEecCHHHHHHHHHHHHhc--CCCE
Confidence            6899999999999999999999997654 332211      010  112    467999999999999888766  4557


Q ss_pred             EEecccc
Q 035504           81 LVNNAAI   87 (174)
Q Consensus        81 li~~ag~   87 (174)
                      ++-..|.
T Consensus        69 ViGTTG~   75 (128)
T d1vm6a3          69 VLGTTAL   75 (128)
T ss_dssp             EECCCSC
T ss_pred             EEEcCCC
Confidence            7777775

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.63  E-value=0.096  Score=31.62  Aligned_cols=65  Identities=15%  Similarity=0.273  Sum_probs=48.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH-HHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKR-GLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +.|.|| |-+|+-++....+.|+++++.+.+++. +.+.          .-.++..|..|.+.+.++..+.     .+|+
T Consensus        14 igIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v----------a~~~i~~~~~d~~~l~~~~~~~-----~~Dv   77 (111)
T d1kjqa2          14 VMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV----------AHRSHVINMLDGDALRRVVELE-----KPHY   77 (111)
T ss_dssp             EEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG----------SSEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc----------CCeEEECCCCCHHHHHHHHHhh-----CCce
Confidence            667774 789999999999999999999987542 1111          1356778999999888877654     6777


Q ss_pred             EE
Q 035504           81 LV   82 (174)
Q Consensus        81 li   82 (174)
                      +.
T Consensus        78 iT   79 (111)
T d1kjqa2          78 IV   79 (111)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.60  E-value=0.49  Score=30.09  Aligned_cols=81  Identities=11%  Similarity=0.102  Sum_probs=51.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC--eEEEEeeChhHHHHHHHHHhhc------------CCCceeEEEeecCChhhHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGI--IVVLTARDEKRGLEAVEKLKHS------------GFDSVIFHQLDVADPATIHSL   67 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dv~~~~~i~~~   67 (174)
                      ++|.|+ |-||..+|+.|.+.|+  +|+..+++.+..+...+ ....            ....+.++.   +-.+.+.++
T Consensus         4 I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~-~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~v   78 (171)
T d2g5ca2           4 VLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD-LGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFREI   78 (171)
T ss_dssp             EEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH-TTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHHH
T ss_pred             EEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH-hhcchhhhhhhhhhhcccccccccc---CCchhhhhh
Confidence            678876 9999999999999996  67888888655443322 2110            001122221   134567778


Q ss_pred             HHHHHhhcCCccEEEecccc
Q 035504           68 ADFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus        68 ~~~~~~~~g~id~li~~ag~   87 (174)
                      +.++.+....=.+++...+.
T Consensus        79 l~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          79 AKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhccccccccccccccc
Confidence            88888777665667666654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.46  E-value=0.036  Score=38.41  Aligned_cols=31  Identities=29%  Similarity=0.210  Sum_probs=27.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |-.|.++|.+|+++|.+|+++.+..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            678876 8999999999999999999998853

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.27  E-value=0.15  Score=31.11  Aligned_cols=31  Identities=19%  Similarity=0.157  Sum_probs=27.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |-||.++|..|.+.|.+|.++.+++
T Consensus        26 ~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          26 LTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             EEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            567766 8999999999999999999998864

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.24  E-value=0.068  Score=32.35  Aligned_cols=32  Identities=28%  Similarity=0.248  Sum_probs=27.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEK   34 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~   34 (174)
                      ++|.|| |-+|.++|..|.+.|.+|.++.|.+.
T Consensus        25 v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          25 LVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             EEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            567776 99999999999999999999988753

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.22  E-value=0.14  Score=31.01  Aligned_cols=31  Identities=23%  Similarity=0.236  Sum_probs=27.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |-+|.++|..|.+.|.+|.++.|..
T Consensus        25 v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          25 IGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             EEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            566666 8999999999999999999999864

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.09  E-value=0.058  Score=33.00  Aligned_cols=31  Identities=35%  Similarity=0.438  Sum_probs=26.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |.+|.++|..|.+.|.+|.++.+.+
T Consensus        35 vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          35 AIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             EEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             EEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            456655 9999999999999999999998864

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.74  E-value=0.38  Score=31.77  Aligned_cols=72  Identities=19%  Similarity=0.038  Sum_probs=46.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      +|=.|++.|.   ++..|++.|++|+.++.+....+...+.+...+ ..+..+..|..+...          ..+.+|++
T Consensus        41 ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~-~~~~~~~~d~~~l~~----------~~~~fD~I  106 (226)
T d1ve3a1          41 VLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSF----------EDKTFDYV  106 (226)
T ss_dssp             EEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCS----------CTTCEEEE
T ss_pred             EEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccc-ccccccccccccccc----------cCcCceEE
Confidence            5667887765   556788899999999998765555545454444 346667777655321          11367877


Q ss_pred             Eecccc
Q 035504           82 VNNAAI   87 (174)
Q Consensus        82 i~~ag~   87 (174)
                      +....+
T Consensus       107 ~~~~~l  112 (226)
T d1ve3a1         107 IFIDSI  112 (226)
T ss_dssp             EEESCG
T ss_pred             EEecch
Confidence            776544

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=92.73  E-value=0.11  Score=34.94  Aligned_cols=36  Identities=19%  Similarity=0.241  Sum_probs=29.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHH
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL   37 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   37 (174)
                      +++|.| .|.+|..+|+.|.+.|++|++.+.+.....
T Consensus        29 ~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~   64 (201)
T d1c1da1          29 TVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVA   64 (201)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHH
Confidence            366776 588999999999999999999988765443

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=92.73  E-value=0.32  Score=32.44  Aligned_cols=56  Identities=18%  Similarity=0.052  Sum_probs=37.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD   60 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~   60 (174)
                      +|=.|++.|.   ++..|+++|++|+.++.+++..+...+.+...+..++.+...|..+
T Consensus        19 VLDiGcG~G~---~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~   74 (231)
T d1vl5a_          19 VLDVATGGGH---VANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ   74 (231)
T ss_dssp             EEEETCTTCH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C
T ss_pred             EEEecccCcH---HHHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccc
Confidence            4556776663   3456788899999999987655555445555555567777777655

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.63  E-value=0.086  Score=32.25  Aligned_cols=32  Identities=22%  Similarity=0.366  Sum_probs=27.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEK   34 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~   34 (174)
                      ++|.|| |.+|.++|..|.++|.+|.++.+.+.
T Consensus        33 vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          33 LLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             EEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            456665 99999999999999999999988753

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.55  E-value=0.096  Score=32.05  Aligned_cols=31  Identities=29%  Similarity=0.329  Sum_probs=26.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |.+|.++|..|.+.|.+|.++.+.+
T Consensus        33 vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          33 VVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            456655 8999999999999999999998864

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=92.49  E-value=0.29  Score=28.49  Aligned_cols=64  Identities=17%  Similarity=0.181  Sum_probs=40.0

Q ss_pred             EecCCCchh-HHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEE
Q 035504            4 VTGANKGIG-YETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILV   82 (174)
Q Consensus         4 itGa~~giG-~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li   82 (174)
                      +.|- +|+| .++|+.|.++|++|...++......   +.+.+.+   +.+...+  +++.+           .+.|.+|
T Consensus        13 fiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~G---i~v~~g~--~~~~i-----------~~~d~vV   72 (96)
T d1p3da1          13 FIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQAG---AKIYIGH--AEEHI-----------EGASVVV   72 (96)
T ss_dssp             EETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHTT---CEEEESC--CGGGG-----------TTCSEEE
T ss_pred             EEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHCC---CeEEECC--ccccC-----------CCCCEEE
Confidence            4443 5666 5679999999999999998754322   3333333   4433322  22222           2679999


Q ss_pred             ecccc
Q 035504           83 NNAAI   87 (174)
Q Consensus        83 ~~ag~   87 (174)
                      ...++
T Consensus        73 ~S~AI   77 (96)
T d1p3da1          73 VSSAI   77 (96)
T ss_dssp             ECTTS
T ss_pred             ECCCc
Confidence            99887

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.43  E-value=0.088  Score=32.31  Aligned_cols=31  Identities=29%  Similarity=0.328  Sum_probs=27.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |-||.++|..|.+.|.+|.++.|++
T Consensus        25 vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          25 SVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             EEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            567776 7899999999999999999999864

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.31  E-value=0.051  Score=37.37  Aligned_cols=39  Identities=21%  Similarity=0.255  Sum_probs=30.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVE   41 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   41 (174)
                      ++|.| .|.+|..+|+.|.+.|++|+.++.+.........
T Consensus        42 v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~   80 (230)
T d1leha1          42 VSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVA   80 (230)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHH
Confidence            44554 5899999999999999999999888665555444

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.25  E-value=0.09  Score=35.59  Aligned_cols=30  Identities=40%  Similarity=0.479  Sum_probs=27.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      |+|.|| |-.|.+.|.+|+++|++|.++.|.
T Consensus         9 VvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           9 VVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            678887 889999999999999999999875

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.25  E-value=0.1  Score=31.72  Aligned_cols=31  Identities=29%  Similarity=0.168  Sum_probs=27.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |-||.++|..|.+.|.+|.++.+..
T Consensus        25 i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          25 LGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            567776 9999999999999999999998764

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.10  E-value=0.1  Score=31.49  Aligned_cols=31  Identities=26%  Similarity=0.146  Sum_probs=27.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |-+|.++|..|.+.|.+|.++.|.+
T Consensus        24 vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          24 VAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             EEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            566665 9999999999999999999998864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.97  E-value=0.11  Score=31.68  Aligned_cols=30  Identities=30%  Similarity=0.375  Sum_probs=26.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      ++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        23 vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          23 TLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            567776 999999999999999999999765

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.88  E-value=0.078  Score=36.79  Aligned_cols=30  Identities=30%  Similarity=0.414  Sum_probs=26.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      ++|.|| |-.|...|.+|+++|.+|+++.+.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            577776 788999999999999999999774

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.39  E-value=0.65  Score=30.28  Aligned_cols=72  Identities=17%  Similarity=0.186  Sum_probs=44.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      +|=.|++  .|. .+..|+++|++|+.++.++...+...+.....+..++.+...|+.+..-           -+.+|.+
T Consensus        34 vLDiGcG--~G~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----------~~~fD~I   99 (198)
T d2i6ga1          34 TLDLGCG--NGR-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----------DGEYDFI   99 (198)
T ss_dssp             EEEETCT--TSH-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----------CCCEEEE
T ss_pred             EEEECCC--CCH-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----------cccccEE
Confidence            4445664  444 5567889999999999987655555444555444456777777654331           1256776


Q ss_pred             Eecccc
Q 035504           82 VNNAAI   87 (174)
Q Consensus        82 i~~ag~   87 (174)
                      +.+.-.
T Consensus       100 ~~~~~~  105 (198)
T d2i6ga1         100 LSTVVM  105 (198)
T ss_dssp             EEESCG
T ss_pred             EEeeee
Confidence            655533

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.15  E-value=0.14  Score=33.31  Aligned_cols=32  Identities=19%  Similarity=0.190  Sum_probs=27.5

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCe-EEEEeeCh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGII-VVLTARDE   33 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~-v~~~~r~~   33 (174)
                      +++|.|| |-.|...|..|.++|++ |.++.++.
T Consensus         6 kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           6 KIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             EEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            4788887 89999999999999985 88888753

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.03  E-value=0.11  Score=31.22  Aligned_cols=31  Identities=29%  Similarity=0.237  Sum_probs=26.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |-+|.++|..|.+.|.+|.++.+.+
T Consensus        24 vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          24 LVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            455555 9999999999999999999998864

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.02  E-value=0.33  Score=32.08  Aligned_cols=77  Identities=18%  Similarity=0.138  Sum_probs=53.0

Q ss_pred             ecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEec
Q 035504            5 TGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNN   84 (174)
Q Consensus         5 tGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~   84 (174)
                      |.|+||...++.+.+ . +.+|+.++++++..+...+.++.. +.++.++..+.++...   .+...  ..+.+|.++..
T Consensus        31 t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~-~~r~~~~~~~f~~~~~---~~~~~--~~~~vdgIl~D  102 (192)
T d1m6ya2          31 TVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF-SDRVSLFKVSYREADF---LLKTL--GIEKVDGILMD  102 (192)
T ss_dssp             TCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG-TTTEEEEECCGGGHHH---HHHHT--TCSCEEEEEEE
T ss_pred             cCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc-cccccchhHHHhhHHH---HHHHc--CCCCcceeeec
Confidence            567777877887766 3 468999999987655555555543 4569999988866433   22221  23589999999


Q ss_pred             ccccC
Q 035504           85 AAIFG   89 (174)
Q Consensus        85 ag~~~   89 (174)
                      -|+.+
T Consensus       103 lGvSs  107 (192)
T d1m6ya2         103 LGVST  107 (192)
T ss_dssp             CSCCH
T ss_pred             cchhH
Confidence            88754

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.93  E-value=0.15  Score=32.20  Aligned_cols=28  Identities=14%  Similarity=0.089  Sum_probs=25.2

Q ss_pred             cCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            6 GANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         6 Ga~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      .+++.||.++|..|+++|++|.++.+..
T Consensus        47 ~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          47 ADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4569999999999999999999998864

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.89  E-value=0.12  Score=36.33  Aligned_cols=30  Identities=20%  Similarity=0.337  Sum_probs=26.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      |+|.|| |-+|.++|.+|+++|. +|+++.++
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            788887 7999999999999996 69999775

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.73  E-value=0.11  Score=31.82  Aligned_cols=31  Identities=29%  Similarity=0.199  Sum_probs=27.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |-||.++|..|.+.|.+|.++.|++
T Consensus        28 ~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          28 LVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             EEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             EEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            456665 9999999999999999999998864

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.63  E-value=1.1  Score=28.38  Aligned_cols=74  Identities=14%  Similarity=0.029  Sum_probs=39.3

Q ss_pred             EEEecCCCchhHHHHHH-HHH-C----CCeEEEEeeChhHHHHHHHHHhhc-CCCceeEEEeecCChhhHHHHHHHHHhh
Q 035504            2 AVVTGANKGIGYETVRQ-LAS-N----GIIVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDVADPATIHSLADFVRSQ   74 (174)
Q Consensus         2 ~litGa~~giG~~~a~~-l~~-~----g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   74 (174)
                      +.|.||++ +|...+.. +++ .    +.++++.+.+++.+... .++... ....... ..  +.  +..+.+      
T Consensus         3 IaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~-~d~~~~~~~~~~~~-~~--t~--~~~~~l------   69 (162)
T d1up7a1           3 IAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIV-VDFVKRLVKDRFKV-LI--SD--TFEGAV------   69 (162)
T ss_dssp             EEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHH-HHHHHHHHTTSSEE-EE--CS--SHHHHH------
T ss_pred             EEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHH-HHHHHhhhccCceE-EE--ec--Cccccc------
Confidence            67888854 66555533 222 1    35899999987765533 333221 1111221 11  11  112222      


Q ss_pred             cCCccEEEecccccC
Q 035504           75 FGKLDILVNNAAIFG   89 (174)
Q Consensus        75 ~g~id~li~~ag~~~   89 (174)
                       .+-|++|..+|...
T Consensus        70 -~~aDvVVita~~~~   83 (162)
T d1up7a1          70 -VDAKYVIFQFRPGG   83 (162)
T ss_dssp             -TTCSEEEECCCTTH
T ss_pred             -CCCCEEEEecccCC
Confidence             27899999998743

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=90.61  E-value=0.11  Score=34.35  Aligned_cols=29  Identities=17%  Similarity=0.208  Sum_probs=25.6

Q ss_pred             EEEecCCCchhHH-----HHHHHHHCCCeEEEEe
Q 035504            2 AVVTGANKGIGYE-----TVRQLASNGIIVVLTA   30 (174)
Q Consensus         2 ~litGa~~giG~~-----~a~~l~~~g~~v~~~~   30 (174)
                      ++|||-+.|+|+.     +|+.|+++|++|.+++
T Consensus         4 ~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             EEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            6899998899986     7889999999999985

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.53  E-value=0.28  Score=33.03  Aligned_cols=38  Identities=18%  Similarity=0.050  Sum_probs=29.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEK   42 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   42 (174)
                      ||..|++.|   ..+..|+++|++|+.++-++...+...++
T Consensus        49 vLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~   86 (229)
T d2bzga1          49 VFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTE   86 (229)
T ss_dssp             EEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             EEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence            688888776   35777899999999999997765554444

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=90.49  E-value=0.39  Score=31.01  Aligned_cols=76  Identities=13%  Similarity=0.079  Sum_probs=41.0

Q ss_pred             EEEecCCCchhHHHHHHHHHC-----CCeEEEEeeChhHHHHHHHHHhh---cCCCceeEEEeecCChhhHHHHHHHHHh
Q 035504            2 AVVTGANKGIGYETVRQLASN-----GIIVVLTARDEKRGLEAVEKLKH---SGFDSVIFHQLDVADPATIHSLADFVRS   73 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~-----g~~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   73 (174)
                      +.|.||++.....+...++++     +.++++.+.+++.++...+.+..   ..+........  +|   ..+.++    
T Consensus         6 I~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~eal~----   76 (167)
T d1u8xx1           6 IVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAFT----   76 (167)
T ss_dssp             EEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHHS----
T ss_pred             EEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhhccC----
Confidence            677888554333344444442     24799999998776644333322   21122322222  12   222222    


Q ss_pred             hcCCccEEEecccccC
Q 035504           74 QFGKLDILVNNAAIFG   89 (174)
Q Consensus        74 ~~g~id~li~~ag~~~   89 (174)
                         +-|++|+.+|...
T Consensus        77 ---~AD~Vvitag~~~   89 (167)
T d1u8xx1          77 ---DVDFVMAHIRVGK   89 (167)
T ss_dssp             ---SCSEEEECCCTTH
T ss_pred             ---CCCEEEECCCcCC
Confidence               7899999999844

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.44  E-value=0.14  Score=32.34  Aligned_cols=34  Identities=18%  Similarity=0.196  Sum_probs=27.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRG   36 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~   36 (174)
                      +-|.|. |-+|.++++.|.++|++|+..+++....
T Consensus         3 IgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~   36 (152)
T d1i36a2           3 VGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPS   36 (152)
T ss_dssp             EEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHH
T ss_pred             EEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHH
Confidence            445554 9999999999999999998888765543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.41  E-value=0.14  Score=34.03  Aligned_cols=31  Identities=16%  Similarity=0.161  Sum_probs=26.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|+ |--|...|.+|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            577775 7778899999999999999998853

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=90.34  E-value=0.19  Score=30.29  Aligned_cols=31  Identities=26%  Similarity=0.258  Sum_probs=26.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |-+|.++|..|.+.|.+|.++.+.+
T Consensus        25 vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          25 VVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             EEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            455554 9999999999999999999998864

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=90.04  E-value=0.22  Score=32.27  Aligned_cols=33  Identities=33%  Similarity=0.332  Sum_probs=25.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEK   34 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~   34 (174)
                      ++|.|-|.-+|+.++..|.++|++|..+.....
T Consensus        40 v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~   72 (166)
T d1b0aa1          40 AVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK   72 (166)
T ss_dssp             EEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred             EEEEeccccccHHHHHHHHHhhccccccccccc
Confidence            678888888888888888888888877765443

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.03  E-value=0.14  Score=34.90  Aligned_cols=31  Identities=23%  Similarity=0.227  Sum_probs=27.0

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      .|+|.|| |--|...|..|+++|.+|+++.++
T Consensus         6 kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           6 RIAVVGG-SISGLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3788887 778899999999999999999875

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=89.90  E-value=1.4  Score=30.69  Aligned_cols=74  Identities=18%  Similarity=0.320  Sum_probs=45.4

Q ss_pred             EEecCCCc-hhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCC-ceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            3 VVTGANKG-IGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD-SVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         3 litGa~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +-.|+++| |+.+++ +  ...++|+.++.++....-..+..+..+.. ++.+...|+.+.         ..+.++++|+
T Consensus       115 ld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~fDl  182 (271)
T d1nv8a_         115 ADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFASIEM  182 (271)
T ss_dssp             EEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTTCCE
T ss_pred             EEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCcccE
Confidence            33455555 444443 2  34678999999977655444444443332 466777777543         2234578999


Q ss_pred             EEeccccc
Q 035504           81 LVNNAAIF   88 (174)
Q Consensus        81 li~~ag~~   88 (174)
                      +|.|.-+-
T Consensus       183 IVsNPPYI  190 (271)
T d1nv8a_         183 ILSNPPYV  190 (271)
T ss_dssp             EEECCCCB
T ss_pred             EEEccccc
Confidence            99998654

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.88  E-value=0.62  Score=31.39  Aligned_cols=68  Identities=24%  Similarity=0.133  Sum_probs=43.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      +|=.|++.|   .++..|+++|++|+.++.++.-.+...+.+...+. ++.+...|+.+.+-           -+.+|.+
T Consensus        45 iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~-~i~~~~~d~~~l~~-----------~~~fD~I  109 (251)
T d1wzna1          45 VLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAF-----------KNEFDAV  109 (251)
T ss_dssp             EEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCC-----------CSCEEEE
T ss_pred             EEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccc-cchheehhhhhccc-----------ccccchH
Confidence            455677665   34567888999999999986544444444444332 58888888765431           1357777


Q ss_pred             Eec
Q 035504           82 VNN   84 (174)
Q Consensus        82 i~~   84 (174)
                      +..
T Consensus       110 ~~~  112 (251)
T d1wzna1         110 TMF  112 (251)
T ss_dssp             EEC
T ss_pred             hhh
Confidence            664

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.78  E-value=0.72  Score=32.50  Aligned_cols=56  Identities=16%  Similarity=0.170  Sum_probs=34.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhc-CCCceeEEEeecCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDVAD   60 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~   60 (174)
                      +||-.|++.|+   ++..+++.|+ +|+.+..++. +....+...+. ...++.++..|+.+
T Consensus        38 ~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~-~~~a~~~~~~~~~~~~i~~~~~~~~~   95 (311)
T d2fyta1          38 VVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRLNKLEDTITLIKGKIEE   95 (311)
T ss_dssp             EEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred             EEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH-HHHHHHHHHHhCCCccceEEEeeHHH
Confidence            36778888775   5666778887 6888887754 33433333332 22356666666554

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.76  E-value=1.6  Score=28.08  Aligned_cols=69  Identities=20%  Similarity=0.251  Sum_probs=44.7

Q ss_pred             ecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcCCccEEEe
Q 035504            5 TGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFGKLDILVN   83 (174)
Q Consensus         5 tGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~   83 (174)
                      .|++.|   .++..+++.+.+|+.++.+++..+...+.+++.+- .++.++..|..+          .......+|.++.
T Consensus        40 iGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~~~D~v~~  106 (186)
T d1l3ia_          40 VGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIPDIDIAVV  106 (186)
T ss_dssp             ESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSCCEEEEEE
T ss_pred             EECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccCCcCEEEE
Confidence            455444   33445666778999999998776666666666554 468888887421          2223457888887


Q ss_pred             ccc
Q 035504           84 NAA   86 (174)
Q Consensus        84 ~ag   86 (174)
                      +.+
T Consensus       107 ~~~  109 (186)
T d1l3ia_         107 GGS  109 (186)
T ss_dssp             SCC
T ss_pred             eCc
Confidence            654

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=89.57  E-value=0.62  Score=32.57  Aligned_cols=67  Identities=12%  Similarity=0.076  Sum_probs=45.4

Q ss_pred             CCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEecccc
Q 035504            8 NKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus         8 ~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~ag~   87 (174)
                      ||-||.++++.+  ...+|+.++.++...+-..+..+..+..++.+++.|+.+.-           ...++|++|.|.-+
T Consensus       119 SG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~-----------~~~~fDlIvsNPPY  185 (274)
T d2b3ta1         119 TGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL-----------AGQQFAMIVSNPPY  185 (274)
T ss_dssp             TSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG-----------TTCCEEEEEECCCC
T ss_pred             hhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc-----------CCCceeEEEecchh
Confidence            466666666643  24689999998776554444455555456999999986542           12479999999754

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.56  E-value=1.2  Score=27.64  Aligned_cols=84  Identities=11%  Similarity=0.080  Sum_probs=50.0

Q ss_pred             EEEecCC---CchhHHHHHHHHHCCCeEEEEeeChhHHHH--HHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGAN---KGIGYETVRQLASNGIIVVLTARDEKRGLE--AVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~---~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|.|+|   +..|..+.+.|.+.|++|+.+..+.....-  ....+.+.. ..+..+.. ....+.+..+++++.+.  
T Consensus        22 IAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp-~~iD~v~i-~vp~~~~~~~~~e~~~~--   97 (139)
T d2d59a1          22 IALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIP-DKIEVVDL-FVKPKLTMEYVEQAIKK--   97 (139)
T ss_dssp             EEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCS-SCCSEEEE-CSCHHHHHHHHHHHHHH--
T ss_pred             EEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccC-ccceEEEE-EeCHHHHHHHHHHHHHh--
Confidence            6899998   679999999999999999999765432110  111111111 11222111 13456677777777655  


Q ss_pred             CccEEEecccccC
Q 035504           77 KLDILVNNAAIFG   89 (174)
Q Consensus        77 ~id~li~~ag~~~   89 (174)
                      ++..++...|...
T Consensus        98 g~k~v~~~~G~~~  110 (139)
T d2d59a1          98 GAKVVWFQYNTYN  110 (139)
T ss_dssp             TCSEEEECTTCCC
T ss_pred             CCCEEEEeccccC
Confidence            3556666666543

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.51  E-value=1.4  Score=29.55  Aligned_cols=76  Identities=14%  Similarity=0.029  Sum_probs=52.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC-----CCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG-----FDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +|-.|+++|.-.++..++.....+|+.+.++++-.+...+.++...     ..++.+...|..+..          ...+
T Consensus        80 VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------~~~~  149 (224)
T d1i1na_          80 ALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------AEEA  149 (224)
T ss_dssp             EEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------GGGC
T ss_pred             EEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------chhh
Confidence            7888998888888777788777899999998776555555554332     234677777764321          1234


Q ss_pred             CccEEEecccc
Q 035504           77 KLDILVNNAAI   87 (174)
Q Consensus        77 ~id~li~~ag~   87 (174)
                      ++|.++.+++.
T Consensus       150 ~fD~I~~~~~~  160 (224)
T d1i1na_         150 PYDAIHVGAAA  160 (224)
T ss_dssp             CEEEEEECSBB
T ss_pred             hhhhhhhhcch
Confidence            79999988875

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=89.42  E-value=0.32  Score=31.83  Aligned_cols=31  Identities=29%  Similarity=0.227  Sum_probs=27.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      +.|.|. |.||..+++.+..-|++|+..++..
T Consensus        45 vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          45 VAVLGL-GEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             EEEESC-STHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             EEEecc-ccccccceeeeeccccccccccccc
Confidence            567776 6699999999999999999998864

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.40  E-value=1.3  Score=29.13  Aligned_cols=56  Identities=18%  Similarity=0.116  Sum_probs=37.9

Q ss_pred             HHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEecccc
Q 035504           18 QLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus        18 ~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~ag~   87 (174)
                      .++.+|+ +|+.++.++.......+.++..+ .+..++..|+.+.             .+++|.+|.|.-.
T Consensus        63 ~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~-~~~~~~~~d~~~~-------------~~~fD~Vi~nPP~  119 (201)
T d1wy7a1          63 GALLLGAKEVICVEVDKEAVDVLIENLGEFK-GKFKVFIGDVSEF-------------NSRVDIVIMNPPF  119 (201)
T ss_dssp             HHHHTTCSEEEEEESCHHHHHHHHHHTGGGT-TSEEEEESCGGGC-------------CCCCSEEEECCCC
T ss_pred             HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcC-CCceEEECchhhh-------------CCcCcEEEEcCcc
Confidence            3456775 79999999766555555555544 3577888887543             2479999988843

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.23  E-value=0.26  Score=30.41  Aligned_cols=31  Identities=26%  Similarity=0.265  Sum_probs=27.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |-+|.++|..|.+.|.+|.++.+.+
T Consensus        38 v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          38 LVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             EEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            567765 9999999999999999999998864

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.95  E-value=0.33  Score=37.32  Aligned_cols=31  Identities=19%  Similarity=0.302  Sum_probs=25.6

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      .|+|.|+ +|+|.++++.|+..|. ++.+++.+
T Consensus        27 ~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          27 HVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             EEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            3788887 8999999999999996 68887553

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.81  E-value=1.9  Score=27.82  Aligned_cols=69  Identities=10%  Similarity=0.133  Sum_probs=43.5

Q ss_pred             CCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcCCccEEEec
Q 035504            7 ANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNN   84 (174)
Q Consensus         7 a~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~   84 (174)
                      |+|++|.+    .+.+|+ +|+++..+.....-..+.++..+. .++.++..|+      .+.+.+..+...++|+++..
T Consensus        51 GsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~------~~~l~~~~~~~~~fDlIflD  120 (182)
T d2fhpa1          51 GSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDA------NRALEQFYEEKLQFDLVLLD  120 (182)
T ss_dssp             TTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH------HHHHHHHHHTTCCEEEEEEC
T ss_pred             ccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccc------hhhhhhhcccCCCcceEEec
Confidence            45666665    455887 499999887655544444443332 2577787775      33445555555679998866


Q ss_pred             c
Q 035504           85 A   85 (174)
Q Consensus        85 a   85 (174)
                      .
T Consensus       121 P  121 (182)
T d2fhpa1         121 P  121 (182)
T ss_dssp             C
T ss_pred             h
Confidence            5

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.74  E-value=0.16  Score=35.20  Aligned_cols=31  Identities=26%  Similarity=0.263  Sum_probs=28.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      |+|.|| |-.|+.+|..|.++|.+|.++.+++
T Consensus         5 V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           5 VAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            789988 5899999999999999999998875

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=88.74  E-value=0.25  Score=32.34  Aligned_cols=31  Identities=26%  Similarity=0.223  Sum_probs=27.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |--|.+.|..|+++|++|.+..+.+
T Consensus        46 V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          46 LAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             EEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            677876 8889999999999999999998864

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=88.67  E-value=2.3  Score=29.10  Aligned_cols=73  Identities=15%  Similarity=0.155  Sum_probs=44.5

Q ss_pred             EEEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            2 AVVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +|=.|++.|.   ++..|+++ |++|+.++-++...+...+.....+. .++.+..+|..+..-          ..+.+|
T Consensus        71 vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~----------~~~sfD  137 (282)
T d2o57a1          71 GLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC----------EDNSYD  137 (282)
T ss_dssp             EEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS----------CTTCEE
T ss_pred             EEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccc----------cccccc
Confidence            3445665442   44455554 88999999887654444444444433 368899999866431          124789


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      +++.....
T Consensus       138 ~V~~~~~l  145 (282)
T d2o57a1         138 FIWSQDAF  145 (282)
T ss_dssp             EEEEESCG
T ss_pred             hhhccchh
Confidence            88876544

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=88.57  E-value=0.22  Score=35.16  Aligned_cols=30  Identities=20%  Similarity=0.279  Sum_probs=22.8

Q ss_pred             EEEecCCCchhH-----HHHHHHHHCCCeEEEEeeC
Q 035504            2 AVVTGANKGIGY-----ETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         2 ~litGa~~giG~-----~~a~~l~~~g~~v~~~~r~   32 (174)
                      ++|++|+.| |.     +++++|.++|++|.+++..
T Consensus         3 ili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           3 LMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             EEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             EEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            567766555 55     6899999999999887654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=88.50  E-value=0.23  Score=30.38  Aligned_cols=31  Identities=16%  Similarity=0.152  Sum_probs=26.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |-||.++|..|.+.|.+|.++.+.+
T Consensus        29 vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          29 LLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             EEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            567766 9999999999999999999997753

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.36  E-value=0.27  Score=31.93  Aligned_cols=34  Identities=26%  Similarity=0.206  Sum_probs=28.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKR   35 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~   35 (174)
                      ++|.|-|.=+|+.++..|.++|++|..+......
T Consensus        42 vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~   75 (170)
T d1a4ia1          42 AVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH   75 (170)
T ss_dssp             EEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS
T ss_pred             EEEEecCCccchHHHHHHHhccCceEEEeccccc
Confidence            6888999999999999999999998888765443

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=88.32  E-value=1.9  Score=29.53  Aligned_cols=69  Identities=20%  Similarity=0.188  Sum_probs=42.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      +|=.|+++|+   ++..+++.|++|+.++.++...+...+..+..+. +..++..|+.+           ....+++|.+
T Consensus       124 VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~-~~~~~~~d~~~-----------~~~~~~fD~V  188 (254)
T d2nxca1         124 VLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGV-RPRFLEGSLEA-----------ALPFGPFDLL  188 (254)
T ss_dssp             EEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTC-CCEEEESCHHH-----------HGGGCCEEEE
T ss_pred             EEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCC-ceeEEeccccc-----------cccccccchh
Confidence            3446777765   3345677899999999998766555544444443 35666665421           1123578988


Q ss_pred             Eecc
Q 035504           82 VNNA   85 (174)
Q Consensus        82 i~~a   85 (174)
                      +.|-
T Consensus       189 ~ani  192 (254)
T d2nxca1         189 VANL  192 (254)
T ss_dssp             EEEC
T ss_pred             hhcc
Confidence            8764

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=87.94  E-value=2  Score=26.97  Aligned_cols=46  Identities=20%  Similarity=0.169  Sum_probs=30.9

Q ss_pred             EEEecCCCchhHHHHHHHHHC--CCeEEEEeeChhHHHHHHHHHhhcCC
Q 035504            2 AVVTGANKGIGYETVRQLASN--GIIVVLTARDEKRGLEAVEKLKHSGF   48 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~   48 (174)
                      +.|-|++|.||.....-+.++  .++|+....+.. .+.+.+++.+..+
T Consensus         4 I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N-~~~L~~q~~~f~p   51 (151)
T d1q0qa2           4 LTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN-VTRMVEQCLEFSP   51 (151)
T ss_dssp             EEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC-HHHHHHHHHHHCC
T ss_pred             EEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc-HHHHHHHHHHHhh
Confidence            689999999999998888776  467776655422 2344444444443

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.72  E-value=0.28  Score=33.11  Aligned_cols=31  Identities=23%  Similarity=0.293  Sum_probs=26.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |--|...|..|+++|++|+++.++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            678887 6788899999999999999998753

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.61  E-value=0.56  Score=30.13  Aligned_cols=35  Identities=31%  Similarity=0.402  Sum_probs=28.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGL   37 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   37 (174)
                      ++|.| -+-||+.+|+.+...|++|+++..++-.+.
T Consensus        27 v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al   61 (163)
T d1li4a1          27 AVVAG-YGDVGKGCAQALRGFGARVIITEIDPINAL   61 (163)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             EEEec-cccccHHHHHHHHhCCCeeEeeecccchhH
Confidence            45555 478999999999999999999999875433

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=87.48  E-value=0.31  Score=31.91  Aligned_cols=29  Identities=31%  Similarity=0.326  Sum_probs=24.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCC-CeEEEEe
Q 035504            2 AVVTGANKGIGYETVRQLASNG-IIVVLTA   30 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g-~~v~~~~   30 (174)
                      +.|.||+|-.|.++++.|.++. .++..+.
T Consensus         8 VaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           8 IAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             EEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             EEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            6899999999999999999985 4665554

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.16  E-value=0.3  Score=34.18  Aligned_cols=30  Identities=27%  Similarity=0.551  Sum_probs=26.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      ++|.|+ +..|...|.+|+++|++|+++.+.
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            577776 888999999999999999999764

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=87.13  E-value=0.63  Score=29.93  Aligned_cols=76  Identities=14%  Similarity=-0.009  Sum_probs=40.8

Q ss_pred             EEEecC-CCchhHHHHHHHHHCC----CeEEEEeeChhHH-HHHHHHHh----hcCCCceeEEEeecCChhhHHHHHHHH
Q 035504            2 AVVTGA-NKGIGYETVRQLASNG----IIVVLTARDEKRG-LEAVEKLK----HSGFDSVIFHQLDVADPATIHSLADFV   71 (174)
Q Consensus         2 ~litGa-~~giG~~~a~~l~~~g----~~v~~~~r~~~~~-~~~~~~l~----~~~~~~~~~~~~Dv~~~~~i~~~~~~~   71 (174)
                      +.|.|| |.|.+..++..+....    .++++.+.+++.. .+....+.    ...+  ........+|..   +.+   
T Consensus         4 I~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~--~~~~~~~~td~~---~al---   75 (169)
T d1s6ya1           4 IATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAG--VPIEIHLTLDRR---RAL---   75 (169)
T ss_dssp             EEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTT--CCCEEEEESCHH---HHH---
T ss_pred             EEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcC--CCceeeecCCch---hhc---
Confidence            578887 4566677766655532    3799999876532 12222111    1111  222222333432   222   


Q ss_pred             HhhcCCccEEEecccccC
Q 035504           72 RSQFGKLDILVNNAAIFG   89 (174)
Q Consensus        72 ~~~~g~id~li~~ag~~~   89 (174)
                          .+-|++|+.+|...
T Consensus        76 ----~gaDvVv~ta~~~~   89 (169)
T d1s6ya1          76 ----DGADFVTTQFRVGG   89 (169)
T ss_dssp             ----TTCSEEEECCCTTH
T ss_pred             ----CCCCEEEEccccCC
Confidence                27899999999854

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=86.55  E-value=0.31  Score=33.20  Aligned_cols=31  Identities=26%  Similarity=0.271  Sum_probs=26.8

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      .|+|.|| |--|...|.+|+++|++|.++-++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            4788888 678899999999999999999765

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=86.47  E-value=4  Score=28.78  Aligned_cols=61  Identities=11%  Similarity=0.182  Sum_probs=40.2

Q ss_pred             HHHCCC-eEEEEeeChhHHHHHHHHHhhc--CCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEecc
Q 035504           19 LASNGI-IVVLTARDEKRGLEAVEKLKHS--GFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNA   85 (174)
Q Consensus        19 l~~~g~-~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~a   85 (174)
                      +++.|+ +|+.++.+........+.++..  ...++.++..|+      ...+++..++..++|++|...
T Consensus       162 aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~------~~~l~~~~~~~~~fD~Ii~DP  225 (317)
T d2b78a2         162 AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDV------FDYFKYARRHHLTYDIIIIDP  225 (317)
T ss_dssp             HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCH------HHHHHHHHHTTCCEEEEEECC
T ss_pred             HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccH------HHHHHHHHhhcCCCCEEEEcC
Confidence            445777 5889998876655555444433  334688888885      344445555666899999886

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=86.41  E-value=0.55  Score=33.17  Aligned_cols=28  Identities=14%  Similarity=-0.005  Sum_probs=20.4

Q ss_pred             EEecCCCchhHHHHHHHHHCCCeEEEEe
Q 035504            3 VVTGANKGIGYETVRQLASNGIIVVLTA   30 (174)
Q Consensus         3 litGa~~giG~~~a~~l~~~g~~v~~~~   30 (174)
                      ++++.++..|.++|......|.+.+++-
T Consensus        72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~   99 (318)
T d1v71a1          72 VLTFSSGNHAQAIALSAKILGIPAKIIM   99 (318)
T ss_dssp             EEECCSSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             eeeeccchhhHHHHHhhcccccceeecc
Confidence            5677778888888887777777654443

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=86.02  E-value=0.69  Score=26.45  Aligned_cols=60  Identities=20%  Similarity=0.212  Sum_probs=39.7

Q ss_pred             CchhH-HHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEecccc
Q 035504            9 KGIGY-ETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus         9 ~giG~-~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~ag~   87 (174)
                      +|+|- ++|+.|.++|+.|...++.....   .+.|++.+   +.+...  -+.+.+           ...|.+|...++
T Consensus        10 gG~GMs~LA~~L~~~G~~VsGSD~~~~~~---t~~L~~~G---i~i~~g--h~~~~i-----------~~~d~vV~SsAI   70 (89)
T d1j6ua1          10 GGIGMSAVALHEFSNGNDVYGSNIEETER---TAYLRKLG---IPIFVP--HSADNW-----------YDPDLVIKTPAV   70 (89)
T ss_dssp             TSHHHHHHHHHHHHTTCEEEEECSSCCHH---HHHHHHTT---CCEESS--CCTTSC-----------CCCSEEEECTTC
T ss_pred             CHHHHHHHHHHHHhCCCeEEEEeCCCChh---HHHHHHCC---CeEEee--eccccc-----------CCCCEEEEecCc
Confidence            66776 68999999999999999875433   33455544   333322  122222           368999999987

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=85.80  E-value=0.33  Score=33.11  Aligned_cols=31  Identities=23%  Similarity=0.278  Sum_probs=26.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      +|+|.|| |-=|...|.+|+++|++|.++.++
T Consensus         3 kV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           3 RVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            3678877 677889999999999999999764

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=85.71  E-value=2.1  Score=28.73  Aligned_cols=71  Identities=20%  Similarity=-0.042  Sum_probs=44.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEE
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDIL   81 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~l   81 (174)
                      +|-.|+++|.-.+   .|++.+.+|+.+..+++..+.. ++..... .++.+...|...-.          ...+++|.+
T Consensus        74 VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A-~~~~~~~-~nv~~~~~d~~~g~----------~~~~pfD~I  138 (224)
T d1vbfa_          74 VLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYA-SKLLSYY-NNIKLILGDGTLGY----------EEEKPYDRV  138 (224)
T ss_dssp             EEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHH-HHHHTTC-SSEEEEESCGGGCC----------GGGCCEEEE
T ss_pred             EEEecCCCCHHHH---HHHHHhcccccccccHHHHHHH-HHHHhcc-cccccccCchhhcc----------hhhhhHHHH
Confidence            6777887775443   4555567899998886544433 3332223 46888888865311          123579999


Q ss_pred             Eecccc
Q 035504           82 VNNAAI   87 (174)
Q Consensus        82 i~~ag~   87 (174)
                      |.+++.
T Consensus       139 iv~~a~  144 (224)
T d1vbfa_         139 VVWATA  144 (224)
T ss_dssp             EESSBB
T ss_pred             Hhhcch
Confidence            988875

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=85.59  E-value=1.6  Score=29.06  Aligned_cols=56  Identities=16%  Similarity=0.087  Sum_probs=36.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVAD   60 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~   60 (174)
                      +|=.|++.|.   ++..|++++.+|+.++.++.-.+...+.++..+..++.++..|..+
T Consensus        20 ILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~   75 (234)
T d1xxla_          20 VLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES   75 (234)
T ss_dssp             EEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB
T ss_pred             EEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccc
Confidence            4446776663   3456677789999999987655554445555444567788877654

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.19  E-value=0.34  Score=34.08  Aligned_cols=31  Identities=13%  Similarity=0.194  Sum_probs=26.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |--|..+|++|++.|.+|.++.++.
T Consensus         4 v~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           4 YIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            578877 7789999999999999999997753

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=85.14  E-value=2.4  Score=27.54  Aligned_cols=30  Identities=17%  Similarity=0.213  Sum_probs=26.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      ++|.|| |..|...|..+++.|.+|.++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            577777 888999999999999999999875

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=85.06  E-value=0.36  Score=33.53  Aligned_cols=31  Identities=29%  Similarity=0.333  Sum_probs=26.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      |+|.|| |--|...|.+|+++|++|.++.+++
T Consensus        33 V~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          33 VVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             EEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            788887 6679999999999999999997653

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=84.97  E-value=1.4  Score=28.98  Aligned_cols=64  Identities=23%  Similarity=0.197  Sum_probs=40.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccE
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDI   80 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~   80 (174)
                      +|=.|++.|+   ++..++..|+ +|+.++.++...+...+.+     .++.+..+|+.+.+             +++|+
T Consensus        52 VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~-----~~~~~~~~D~~~l~-------------~~fD~  110 (197)
T d1ne2a_          52 VIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC-----GGVNFMVADVSEIS-------------GKYDT  110 (197)
T ss_dssp             EEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC-----TTSEEEECCGGGCC-------------CCEEE
T ss_pred             EEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc-----ccccEEEEehhhcC-------------CcceE
Confidence            3445666552   3344666775 5999998865433222221     34788889985432             58999


Q ss_pred             EEeccc
Q 035504           81 LVNNAA   86 (174)
Q Consensus        81 li~~ag   86 (174)
                      +|.|.-
T Consensus       111 Vi~NPP  116 (197)
T d1ne2a_         111 WIMNPP  116 (197)
T ss_dssp             EEECCC
T ss_pred             EEeCcc
Confidence            998863

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=84.96  E-value=4.8  Score=28.34  Aligned_cols=63  Identities=14%  Similarity=0.024  Sum_probs=41.6

Q ss_pred             HHHHCCCeEEEEeeChhHHHHHHHHHhhc--CCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEeccc
Q 035504           18 QLASNGIIVVLTARDEKRGLEAVEKLKHS--GFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAA   86 (174)
Q Consensus        18 ~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~ag   86 (174)
                      .+++.|++|+.++.+....+...+.+...  ...++.++..|+      .+.+++..+.-.++|++|.+.-
T Consensus       149 ~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~------~~~l~~~~~~~~~fD~IilDPP  213 (309)
T d2igta1         149 VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA------MKFIQREERRGSTYDIILTDPP  213 (309)
T ss_dssp             HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH------HHHHHHHHHHTCCBSEEEECCC
T ss_pred             HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCH------HHhHHHHhhcCCCCCEEEECCC
Confidence            34568999999998877655554444333  333578888775      3445555555668999998863

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=84.80  E-value=2  Score=27.69  Aligned_cols=66  Identities=12%  Similarity=0.095  Sum_probs=41.3

Q ss_pred             CCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEecc
Q 035504            7 ANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNA   85 (174)
Q Consensus         7 a~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~a   85 (174)
                      |+|.+|.+    .+.+|+ +|+++..+....+-..+.+......+..++..|+.+         .+......+|+++...
T Consensus        53 GsG~~gie----alsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~~---------~l~~~~~~fDlIf~DP  119 (183)
T d2fpoa1          53 GSGALGLE----ALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMS---------FLAQKGTPHNIVFVDP  119 (183)
T ss_dssp             TTCHHHHH----HHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHH---------HHSSCCCCEEEEEECC
T ss_pred             cccceeee----EEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeecccc---------cccccccccCEEEEcC
Confidence            44555544    555787 599999987765555555555555567777776421         2223345789888875

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=84.76  E-value=0.43  Score=33.98  Aligned_cols=29  Identities=28%  Similarity=0.428  Sum_probs=24.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEee
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTAR   31 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r   31 (174)
                      ++|.|++ -=|..+|++|++.|.+|+++-+
T Consensus         7 viIVGsG-~aG~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           7 VVIVGSG-PIGCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEECcC-HHHHHHHHHHhhCCCeEEEEec
Confidence            5777764 4489999999999999999965

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.66  E-value=0.4  Score=31.94  Aligned_cols=33  Identities=24%  Similarity=0.174  Sum_probs=27.4

Q ss_pred             CEEEecCCCchhHH-----HHHHHHHCCCeEEEEeeCh
Q 035504            1 YAVVTGANKGIGYE-----TVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         1 ~~litGa~~giG~~-----~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++.|+++-||.|..     +|..|+++|.+|.+++.+.
T Consensus         3 vIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           3 TITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            47889999999876     6778889999999998753

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=84.58  E-value=0.62  Score=30.82  Aligned_cols=33  Identities=18%  Similarity=0.112  Sum_probs=27.3

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCCeEEEEeeChh
Q 035504            1 YAVVTGANKGIGYETVRQLASNGIIVVLTARDEK   34 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~   34 (174)
                      ++.|.|. |.||+.+|+.|..-|++|+..++...
T Consensus        45 ~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          45 VVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             eEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            3566765 89999999999999999999887543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=84.51  E-value=0.47  Score=32.23  Aligned_cols=32  Identities=28%  Similarity=0.324  Sum_probs=27.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEK   34 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~   34 (174)
                      ++|.|| |.-|...|..|+++|.+|+++.+++.
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            678887 77788999999999999999988754

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.31  E-value=0.82  Score=28.54  Aligned_cols=32  Identities=25%  Similarity=0.227  Sum_probs=25.1

Q ss_pred             CEEEecCCCchhHHHHHHHHHCC---CeEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNG---IIVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g---~~v~~~~r~   32 (174)
                      .+.|.||+|-.|.++++.|.+++   .++..++.+
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~   38 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA   38 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence            36899999999999999998765   356665443

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.28  E-value=3.2  Score=25.69  Aligned_cols=65  Identities=12%  Similarity=0.269  Sum_probs=39.4

Q ss_pred             CCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcCCccEEEecc
Q 035504            8 NKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNA   85 (174)
Q Consensus         8 ~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~a   85 (174)
                      +|.+|.    +.+.+|+ +|+.+..++...+...+.++..+. .++.+++.|..+      .+   ....++.|+++.+.
T Consensus        25 tG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l---~~~~~~fDiIf~DP   91 (152)
T d2esra1          25 SGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AI---DCLTGRFDLVFLDP   91 (152)
T ss_dssp             TCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HH---HHBCSCEEEEEECC
T ss_pred             cCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cc---cccccccceeEech
Confidence            444554    3456776 699999887665544444444333 358888887432      22   22345789888765

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.13  E-value=2.6  Score=32.01  Aligned_cols=71  Identities=10%  Similarity=0.076  Sum_probs=49.6

Q ss_pred             EEecCCCchhHHHHHHHHHC-CCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhh
Q 035504            3 VVTGANKGIGYETVRQLASN-GIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQ   74 (174)
Q Consensus         3 litGa~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   74 (174)
                      ++++.||..|.|.+..+... +.+|++......-..-..+++....+.++..+.+| .+.++.+.+++++...
T Consensus       155 il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~~Nv~~i~v~-G~fDDcq~~vk~~f~d  226 (511)
T d1kl7a_         155 VVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVT-GTFDNCQDIVKAIFGD  226 (511)
T ss_dssp             EEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred             EEEecCCCccHHHHHHhcCCCCceeEEeccCCCCchHHHHHHhhcCCceEEEEEec-cChHHHHHHHHHHHhh
Confidence            44455688999999998854 67888887753211112234445455679999998 6889999999988753

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=83.84  E-value=0.6  Score=31.32  Aligned_cols=30  Identities=33%  Similarity=0.429  Sum_probs=26.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      ++|.|| |--|...|..|+++|++|.++.++
T Consensus        52 VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~   81 (233)
T d1djqa3          52 VLIVGA-GPSGSEAARVLMESGYTVHLTDTA   81 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEEcc-cHHHHHHHHHHHHhccceeeEeec
Confidence            678887 777999999999999999999775

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=83.79  E-value=0.61  Score=30.89  Aligned_cols=31  Identities=19%  Similarity=0.191  Sum_probs=26.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      +.|.|. |.||+.+++.|..-|++|+..++..
T Consensus        48 vgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          48 VGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             eeeeec-ccccccccccccccceeeeccCCcc
Confidence            556665 8899999999999999999998753

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.64  E-value=0.57  Score=31.13  Aligned_cols=32  Identities=19%  Similarity=0.230  Sum_probs=27.0

Q ss_pred             CEEEecCCCchhHH-----HHHHHHHCCCeEEEEeeC
Q 035504            1 YAVVTGANKGIGYE-----TVRQLASNGIIVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~-----~a~~l~~~g~~v~~~~r~   32 (174)
                      ++.|+|+-||.|+.     +|..|+++|.+|.+++-+
T Consensus         4 vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            36789999999876     778888999999999865

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=83.56  E-value=0.5  Score=33.32  Aligned_cols=30  Identities=23%  Similarity=0.452  Sum_probs=25.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      ++|.|+ +.-|...|..|+++|++|+++.+.
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            577776 778999999999999999999764

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=83.37  E-value=3.8  Score=27.45  Aligned_cols=74  Identities=15%  Similarity=0.078  Sum_probs=44.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +|=.|++.|  . .+..+++.|. +|+.++.++...+...+....... .++.+...|.....-         ...+.+|
T Consensus        28 VLDlGCG~G--~-~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~~~~fD   95 (252)
T d1ri5a_          28 VLDLGCGKG--G-DLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DLGKEFD   95 (252)
T ss_dssp             EEEETCTTT--T-THHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CCSSCEE
T ss_pred             EEEecccCc--H-HHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------cccccce
Confidence            344566554  2 2345566664 799999997766555555544332 258888999754321         0123689


Q ss_pred             EEEecccc
Q 035504           80 ILVNNAAI   87 (174)
Q Consensus        80 ~li~~ag~   87 (174)
                      +++.+-++
T Consensus        96 ~V~~~~~l  103 (252)
T d1ri5a_          96 VISSQFSF  103 (252)
T ss_dssp             EEEEESCG
T ss_pred             EEEEccee
Confidence            88776655

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.09  E-value=0.65  Score=32.40  Aligned_cols=30  Identities=27%  Similarity=0.361  Sum_probs=25.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      |+|.|| |--|...|.+|+++|++|.++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            678887 566899999999999999999764

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=83.00  E-value=0.49  Score=32.47  Aligned_cols=33  Identities=24%  Similarity=0.375  Sum_probs=26.6

Q ss_pred             CEEEecCCCchhHH-----HHHHHHHCCCeEEEEeeChh
Q 035504            1 YAVVTGANKGIGYE-----TVRQLASNGIIVVLTARDEK   34 (174)
Q Consensus         1 ~~litGa~~giG~~-----~a~~l~~~g~~v~~~~r~~~   34 (174)
                      ++.|+| =||+|+.     +|..|++.|++|.+++.+.+
T Consensus         3 ~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           3 QVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             EEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            356787 7888876     67789999999999998753

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=82.87  E-value=0.68  Score=30.59  Aligned_cols=31  Identities=23%  Similarity=0.374  Sum_probs=25.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARD   32 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~   32 (174)
                      .|+|.|| |--|+..|.+|.++|. +|.++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~   33 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEAT   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECC
Confidence            3788887 7778899999999996 69998765

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=82.85  E-value=0.78  Score=29.53  Aligned_cols=75  Identities=21%  Similarity=0.231  Sum_probs=42.8

Q ss_pred             EEEecCCCchhH--HHHHHHHHC----CCeEEEEeeChhHHHHHHHHHh---hcCCCceeEEEeecCChhhHHHHHHHHH
Q 035504            2 AVVTGANKGIGY--ETVRQLASN----GIIVVLTARDEKRGLEAVEKLK---HSGFDSVIFHQLDVADPATIHSLADFVR   72 (174)
Q Consensus         2 ~litGa~~giG~--~~a~~l~~~----g~~v~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   72 (174)
                      +.|.|| |.+|.  ++...+++.    +.++++.+.+++.++.....++   ...+....+...     .+.+++++   
T Consensus         5 I~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~-----td~~eaL~---   75 (171)
T d1obba1           5 IGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT-----MNLDDVII---   75 (171)
T ss_dssp             EEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE-----SCHHHHHT---
T ss_pred             EEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe-----CChhhccc---
Confidence            568887 55554  455555543    4589999999776554333222   222222333322     12333333   


Q ss_pred             hhcCCccEEEecccccC
Q 035504           73 SQFGKLDILVNNAAIFG   89 (174)
Q Consensus        73 ~~~g~id~li~~ag~~~   89 (174)
                          ..|++|+.++...
T Consensus        76 ----dad~Vv~~~~~g~   88 (171)
T d1obba1          76 ----DADFVINTAMVGG   88 (171)
T ss_dssp             ----TCSEEEECCCTTH
T ss_pred             ----CCCeEeeeccccc
Confidence                7899999988743

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.64  E-value=0.71  Score=30.12  Aligned_cols=32  Identities=25%  Similarity=0.180  Sum_probs=26.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEK   34 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~   34 (174)
                      +.|.| .|.||+++++.+..-|++|+..++...
T Consensus        47 vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~   78 (184)
T d1ygya1          47 VGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVS   78 (184)
T ss_dssp             EEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeecc-ccchhHHHHHHhhhccceEEeecCCCC
Confidence            34555 599999999999999999999987643

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=82.62  E-value=0.23  Score=31.20  Aligned_cols=80  Identities=15%  Similarity=0.052  Sum_probs=43.6

Q ss_pred             EecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCC------ceeEEEeecCChhhHHHHHHHHHhhcCC
Q 035504            4 VTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSGFD------SVIFHQLDVADPATIHSLADFVRSQFGK   77 (174)
Q Consensus         4 itGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~------~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   77 (174)
                      +.| .|-+|.++++.|.+.+..+.+.+|+.+.+++..++......+      ...++-.-+.| +.+..+++++.   .+
T Consensus         4 fIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~d-~~i~~v~~~l~---~~   78 (153)
T d2i76a2           4 FVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPD-RYIKTVANHLN---LG   78 (153)
T ss_dssp             EES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCT-TTHHHHHTTTC---CS
T ss_pred             EEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEeccc-hhhhHHHhhhc---cc
Confidence            344 477999999988654443457889888777776665432211      11222222333 45666655542   12


Q ss_pred             ccEEEeccccc
Q 035504           78 LDILVNNAAIF   88 (174)
Q Consensus        78 id~li~~ag~~   88 (174)
                      =.++||+++..
T Consensus        79 ~~ivi~~s~~~   89 (153)
T d2i76a2          79 DAVLVHCSGFL   89 (153)
T ss_dssp             SCCEEECCSSS
T ss_pred             ceeeeecccch
Confidence            24778888754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=82.60  E-value=0.72  Score=32.63  Aligned_cols=31  Identities=29%  Similarity=0.304  Sum_probs=26.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |--|...|.+|++.|++|.++.++.
T Consensus         5 I~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           5 ILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            677876 6778889999999999999997764

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=82.24  E-value=3.2  Score=26.67  Aligned_cols=71  Identities=14%  Similarity=0.072  Sum_probs=43.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeChhHHHHHHHHHhhcC--CCceeEEEeecCChhhHHHHHHHHHhhcCCcc
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDEKRGLEAVEKLKHSG--FDSVIFHQLDVADPATIHSLADFVRSQFGKLD   79 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id   79 (174)
                      +|=.|++.|   .++..+++.+.+|.+++.++.......+.++..+  ..++.+...|+.+.-.           -+.+|
T Consensus        56 VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~~-----------~~~fD  121 (194)
T d1dusa_          56 ILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK-----------DRKYN  121 (194)
T ss_dssp             EEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT-----------TSCEE
T ss_pred             EEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhhc-----------cCCce
Confidence            344555544   3345566778899999988765554444444332  2357888888754211           13789


Q ss_pred             EEEeccc
Q 035504           80 ILVNNAA   86 (174)
Q Consensus        80 ~li~~ag   86 (174)
                      .++.|.-
T Consensus       122 ~Ii~~~p  128 (194)
T d1dusa_         122 KIITNPP  128 (194)
T ss_dssp             EEEECCC
T ss_pred             EEEEccc
Confidence            9998763

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=82.15  E-value=3.3  Score=27.65  Aligned_cols=77  Identities=10%  Similarity=0.015  Sum_probs=50.0

Q ss_pred             CEEEecCCCchhHHHHHHHHH-CC----CeEEEEeeChhHHHHHHHHHh-----hcCCCceeEEEeecCChhhHHHHHHH
Q 035504            1 YAVVTGANKGIGYETVRQLAS-NG----IIVVLTARDEKRGLEAVEKLK-----HSGFDSVIFHQLDVADPATIHSLADF   70 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~-~g----~~v~~~~r~~~~~~~~~~~l~-----~~~~~~~~~~~~Dv~~~~~i~~~~~~   70 (174)
                      .+|..|+++|--.++..+++. .|    .+|+.+.++++-.+...+.+.     ..+..++.+...|..+..        
T Consensus        83 ~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~--------  154 (223)
T d1r18a_          83 RILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY--------  154 (223)
T ss_dssp             EEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC--------
T ss_pred             eEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc--------
Confidence            378899988887777776664 44    479999888654433332221     112235888888875422        


Q ss_pred             HHhhcCCccEEEecccc
Q 035504           71 VRSQFGKLDILVNNAAI   87 (174)
Q Consensus        71 ~~~~~g~id~li~~ag~   87 (174)
                        ...+++|.++.+++.
T Consensus       155 --~~~~~fD~Iiv~~a~  169 (223)
T d1r18a_         155 --PPNAPYNAIHVGAAA  169 (223)
T ss_dssp             --GGGCSEEEEEECSCB
T ss_pred             --ccccceeeEEEEeec
Confidence              134589999988876

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=82.02  E-value=0.76  Score=28.97  Aligned_cols=23  Identities=22%  Similarity=0.475  Sum_probs=21.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC
Q 035504            2 AVVTGANKGIGYETVRQLASNGI   24 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~   24 (174)
                      +.|.||+|-.|.++.+.|.++.+
T Consensus         4 VaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           4 VAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEECCCcHHHHHHHHHHHcCCC
Confidence            68999999999999999999864

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.01  E-value=0.88  Score=29.40  Aligned_cols=31  Identities=19%  Similarity=0.245  Sum_probs=27.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      ++|.|-|.=+|+.++..|+++|+.|..+..+
T Consensus        32 vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          32 CIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             EEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             EEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            7899999999999999999999999877654

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=81.74  E-value=1.2  Score=31.63  Aligned_cols=24  Identities=21%  Similarity=-0.085  Sum_probs=18.2

Q ss_pred             HHHHHHHHhhcCCccEEEeccccc
Q 035504           65 HSLADFVRSQFGKLDILVNNAAIF   88 (174)
Q Consensus        65 ~~~~~~~~~~~g~id~li~~ag~~   88 (174)
                      ..+..++.++.+.+|.+|...|..
T Consensus       163 ~t~~~Ei~~q~~~~D~vv~~~G~G  186 (331)
T d1tdja1         163 GTLALELLQQDAHLDRVFVPVGGG  186 (331)
T ss_dssp             HHHHHHHHHHCTTCCEEEEECSSS
T ss_pred             hhHHHHHHHhcCCCCEEEEeCChh
Confidence            335567777888999999988754

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=81.69  E-value=6.7  Score=27.55  Aligned_cols=63  Identities=21%  Similarity=0.150  Sum_probs=40.5

Q ss_pred             HHHCCC-eEEEEeeChhHHHHHHHHHhhcCC-CceeEEEeecCChhhHHHHHHHHHhhcCCccEEEecccc
Q 035504           19 LASNGI-IVVLTARDEKRGLEAVEKLKHSGF-DSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNAAI   87 (174)
Q Consensus        19 l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~ag~   87 (174)
                      +++.|+ +|+.++.++...+...+.+...+- .++.++..|+.      ...........++|.+|.+.-.
T Consensus       163 ~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~~~~fD~Vi~DpP~  227 (324)
T d2as0a2         163 AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKKGEKFDIVVLDPPA  227 (324)
T ss_dssp             HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHTTCCEEEEEECCCC
T ss_pred             hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhccCCCCchhcCCcc
Confidence            345676 699999997765555555554443 35777777653      3334444455689999988743

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.65  E-value=0.69  Score=32.54  Aligned_cols=31  Identities=23%  Similarity=0.179  Sum_probs=26.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      ++|.|| |--|.+.|++|.++|.+++++.+.+
T Consensus        10 V~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1          10 VLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            678888 6778999999999999999997753

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=81.54  E-value=4.6  Score=25.54  Aligned_cols=62  Identities=16%  Similarity=0.175  Sum_probs=35.2

Q ss_pred             HHHHHCCCeEEEEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcCCccEEEecc
Q 035504           17 RQLASNGIIVVLTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFGKLDILVNNA   85 (174)
Q Consensus        17 ~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~id~li~~a   85 (174)
                      -+++.+|++++.++.++...+...+.++..+.. ..+...|      .+...........++|+++.+.
T Consensus        57 i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~-~~v~~~~------~d~~~~~~~~~~~~fD~If~DP  118 (171)
T d1ws6a1          57 LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLG-ARVVALP------VEVFLPEAKAQGERFTVAFMAP  118 (171)
T ss_dssp             HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCC-CEEECSC------HHHHHHHHHHTTCCEEEEEECC
T ss_pred             hhhhhccchhhhcccCHHHHhhhhHHHHhhccc-cceeeee------hhcccccccccCCccceeEEcc
Confidence            356668999999988877655444445444322 2222222      2222333344456799998775

>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: KDPG aldolase
species: Escherichia coli [TaxId: 562]

Probab=81.47  E-value=5.5  Score=26.42  Aligned_cols=65  Identities=15%  Similarity=0.263  Sum_probs=49.3

Q ss_pred             EEecCCCchhHHHHHHHHHCCCeEE-EEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHH
Q 035504            3 VVTGANKGIGYETVRQLASNGIIVV-LTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLAD   69 (174)
Q Consensus         3 litGa~~giG~~~a~~l~~~g~~v~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~   69 (174)
                      +|++-+---...+++.|.+.|.+++ ++-|+ +.+.+..+.+.+..++ +.+=..-+.+.++++++++
T Consensus        20 vlr~~~~~~a~~~~~al~~~Gi~~iEitl~t-p~a~~~I~~l~~~~p~-~~vGaGTV~~~~~~~~a~~   85 (213)
T d1wbha1          20 VIVVKKLEHAVPMAKALVAGGVRVLNVTLRT-ECAVDAIRAIAKEVPE-AIVGAGTVLNPQQLAEVTE   85 (213)
T ss_dssp             EECCSSGGGHHHHHHHHHHTTCCEEEEESCS-TTHHHHHHHHHHHCTT-SEEEEESCCSHHHHHHHHH
T ss_pred             EEECCCHHHHHHHHHHHHHCCCCEEEEeCCC-hhHHHHHHHHHHHCCC-CeeeccccccHHHHHHHHH
Confidence            5666677778899999999999866 55555 4567777888877765 6666778889999887764

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.36  E-value=3  Score=29.21  Aligned_cols=56  Identities=20%  Similarity=0.081  Sum_probs=32.7

Q ss_pred             CEEEecCCCchhHHHHHHHHHCCC-eEEEEeeChhHHHHHHHHHhhc-CCCceeEEEeecCC
Q 035504            1 YAVVTGANKGIGYETVRQLASNGI-IVVLTARDEKRGLEAVEKLKHS-GFDSVIFHQLDVAD   60 (174)
Q Consensus         1 ~~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~   60 (174)
                      +||-.|++.|+   ++..+++.|+ +|+.+..++. .....+..... ..+++.++..|+.+
T Consensus        36 ~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~   93 (316)
T d1oria_          36 VVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEE   93 (316)
T ss_dssp             EEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred             EEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHH
Confidence            36777887775   4566777886 5888887643 33333333322 22346666666544

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=81.26  E-value=0.72  Score=30.39  Aligned_cols=31  Identities=13%  Similarity=0.093  Sum_probs=26.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~~   33 (174)
                      +.|.|. |.||+.+|+.+..-|++|+..++..
T Consensus        52 vgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          52 LGIIGL-GRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             EEEecc-ccccccceeeeeccccceeeccCcc
Confidence            556665 8999999999999999999988754

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=81.23  E-value=0.68  Score=29.40  Aligned_cols=28  Identities=21%  Similarity=0.191  Sum_probs=22.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEe
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTA   30 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~   30 (174)
                      ++|.|| |.+|.++|..|.+.|.++.++.
T Consensus         6 VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           6 VVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             EEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            566665 9999999999999998754443

>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: KDPG aldolase
species: Pseudomonas putida [TaxId: 303]

Probab=81.11  E-value=5.7  Score=26.40  Aligned_cols=66  Identities=23%  Similarity=0.267  Sum_probs=50.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEE-EEeeChhHHHHHHHHHhhcCCCceeEEEeecCChhhHHHHHH
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVV-LTARDEKRGLEAVEKLKHSGFDSVIFHQLDVADPATIHSLAD   69 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~   69 (174)
                      .+|.+.+.--...+++.|.+.|.+++ ++-|++ ...+..+.+.+.+++ +.+=..-+.+.++++++++
T Consensus        21 pvl~~~~~~~a~~~~~al~~~Gi~~iEitl~~p-~a~~~i~~l~~~~p~-~~vGaGTV~~~~~~~~a~~   87 (216)
T d1mxsa_          21 PVITIAREEDILPLADALAAGGIRTLEVTLRSQ-HGLKAIQVLREQRPE-LCVGAGTVLDRSMFAAVEA   87 (216)
T ss_dssp             EEECCSCGGGHHHHHHHHHHTTCCEEEEESSST-HHHHHHHHHHHHCTT-SEEEEECCCSHHHHHHHHH
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCCEEEEeCCCh-hHHHHHHHHHHhCCC-cceeeeeeecHHHHHHHHh
Confidence            35677777788899999999999866 666664 466777888887765 7766778889998887765

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.04  E-value=0.6  Score=32.90  Aligned_cols=30  Identities=23%  Similarity=0.406  Sum_probs=25.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEeeC
Q 035504            2 AVVTGANKGIGYETVRQLASNGIIVVLTARD   32 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~~v~~~~r~   32 (174)
                      +||.|+ +.-|...|.+++++|.+|+++.+.
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            577766 788999999999999999999764

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=80.71  E-value=0.76  Score=31.52  Aligned_cols=33  Identities=27%  Similarity=0.331  Sum_probs=27.7

Q ss_pred             EEEecCCCchhHH-----HHHHHHHCCCeEEEEeeChh
Q 035504            2 AVVTGANKGIGYE-----TVRQLASNGIIVVLTARDEK   34 (174)
Q Consensus         2 ~litGa~~giG~~-----~a~~l~~~g~~v~~~~r~~~   34 (174)
                      ++|+.|=||+|+.     +|..|+++|.+|++++.+++
T Consensus        22 iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          22 LIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            5677679999987     57899999999999998854

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.48  E-value=1  Score=30.35  Aligned_cols=31  Identities=26%  Similarity=0.279  Sum_probs=25.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEeeCh
Q 035504            2 AVVTGANKGIGYETVRQLASNGI-IVVLTARDE   33 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~g~-~v~~~~r~~   33 (174)
                      |+|.|| |--|..+|..|.+.|. +|.++.++.
T Consensus         4 V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           4 ILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            688887 6679999999999995 888887753

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=80.35  E-value=1  Score=27.00  Aligned_cols=81  Identities=15%  Similarity=0.069  Sum_probs=46.1

Q ss_pred             EEEecCC---CchhHHHHHHHHHCCCeEEEEeeChhHHHH--HHHHHhhcCCCceeEEEeecCChhhHHHHHHHHHhhcC
Q 035504            2 AVVTGAN---KGIGYETVRQLASNGIIVVLTARDEKRGLE--AVEKLKHSGFDSVIFHQLDVADPATIHSLADFVRSQFG   76 (174)
Q Consensus         2 ~litGa~---~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   76 (174)
                      +.|.|+|   +-.|..+.+.|.+.|++|+.+..+.+....  ....+.+.. ..+.... =....+.+.++++++.+.  
T Consensus         4 IAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp-~~~D~vv-i~vp~~~~~~~l~~~~~~--   79 (116)
T d1y81a1           4 IALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELP-KDVDVIV-FVVPPKVGLQVAKEAVEA--   79 (116)
T ss_dssp             EEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSC-TTCCEEE-ECSCHHHHHHHHHHHHHT--
T ss_pred             EEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhcc-ccceEEE-EEeCHHHHHHHHHHHHhc--
Confidence            6789998   568999999999999999988765332110  011111111 1122111 113455667777766554  


Q ss_pred             CccEEEeccc
Q 035504           77 KLDILVNNAA   86 (174)
Q Consensus        77 ~id~li~~ag   86 (174)
                      ++..++...|
T Consensus        80 g~k~v~~~~g   89 (116)
T d1y81a1          80 GFKKLWFQPG   89 (116)
T ss_dssp             TCCEEEECTT
T ss_pred             CCceEEeccc
Confidence            3445555444

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.16  E-value=1.1  Score=28.92  Aligned_cols=28  Identities=18%  Similarity=0.255  Sum_probs=23.8

Q ss_pred             EEEecCCCchhHHHHHHHHHC-CCeEEEE
Q 035504            2 AVVTGANKGIGYETVRQLASN-GIIVVLT   29 (174)
Q Consensus         2 ~litGa~~giG~~~a~~l~~~-g~~v~~~   29 (174)
                      +.|.||+|-.|.++.+.|..+ ..++..+
T Consensus         4 VaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           4 TLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             EEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             EEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            689999999999999999998 4566533