Your job contains 1 sequence.
>035508
LNTTAVSSNRIHPPSSSNQFIIIANTSSIIRHHRRRDRISLNRNRNMHMEARKYVWEGAI
PLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLPPGVDTIWFEYKGLP
LKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSLKEAAYII
NGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDDYTVKLNSSSKSQQGT
GETDFAGQVKTGRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFINRPVEVRTEEGKCFT
LRDAIKTLLPEYFTDKPLFNDESPKLEDEEMNLSSEDAGSNKNTEVEEILYEHVTRNAEI
KLVRIQGIEPKLEIPFSWV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035508
(379 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2167195 - symbol:APG5 "AT5G17290" species:3702... 1052 2.5e-106 1
ZFIN|ZDB-GENE-040801-149 - symbol:atg5 "ATG5 autophagy re... 246 6.1e-30 3
UNIPROTKB|Q9H1Y0 - symbol:ATG5 "Autophagy protein 5" spec... 275 3.2e-28 2
MGI|MGI:1277186 - symbol:Atg5 "autophagy related 5" speci... 275 3.2e-28 2
UNIPROTKB|F6V678 - symbol:ATG5 "Uncharacterized protein" ... 274 4.1e-28 2
UNIPROTKB|Q3MQ24 - symbol:ATG5 "Autophagy protein 5" spec... 271 8.4e-28 2
RGD|1359580 - symbol:Atg5 "autophagy related 5" species:1... 271 1.1e-27 2
UNIPROTKB|F1RVE4 - symbol:ATG5 "Autophagy protein 5" spec... 270 1.1e-27 2
UNIPROTKB|I3LTI9 - symbol:ATG5 "Autophagy protein 5" spec... 269 1.4e-27 2
UNIPROTKB|Q3MQ04 - symbol:ATG5 "Autophagy protein 5" spec... 269 1.7e-27 2
UNIPROTKB|Q5ZHW2 - symbol:ATG5 "Uncharacterized protein" ... 264 4.5e-27 2
UNIPROTKB|F1LPF9 - symbol:Atg5 "Autophagy protein 5" spec... 244 7.1e-25 2
UNIPROTKB|E2QRW5 - symbol:ATG5 "Uncharacterized protein" ... 274 6.8e-24 1
DICTYBASE|DDB_G0289881 - symbol:atg5 "autophagy protein 5... 178 1.1e-22 3
UNIPROTKB|G8JKW2 - symbol:ATG5 "Autophagy protein 5" spec... 257 4.3e-22 1
FB|FBgn0029943 - symbol:Atg5 "Autophagy-specific gene 5" ... 206 2.2e-16 1
ASPGD|ASPL0000030052 - symbol:AN5174 species:162425 "Emer... 204 2.1e-14 1
POMBASE|SPBC4B4.10c - symbol:atg5 "autophagy associated p... 182 1.6e-12 1
UNIPROTKB|Q525E4 - symbol:ATG5 "Autophagy protein 5" spec... 163 1.4e-09 1
CGD|CAL0000453 - symbol:orf19.3677 species:5476 "Candida ... 100 4.6e-08 2
WB|WBGene00022152 - symbol:atg-5 species:6239 "Caenorhabd... 146 8.6e-08 1
SGD|S000006070 - symbol:ATG5 "Conserved protein involved ... 136 1.5e-06 1
>TAIR|locus:2167195 [details] [associations]
symbol:APG5 "AT5G17290" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006914 "autophagy"
evidence=IEA;ISS;IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0042594 "response to starvation" evidence=IMP] [GO:0050832
"defense response to fungus" evidence=IEP] InterPro:IPR007239
Pfam:PF04106 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0050832 GO:GO:0015031 GO:GO:0006914 GO:GO:0042594
GO:GO:0010150 EMBL:AB005238 EMBL:AK117572 EMBL:BT005100
IPI:IPI00539109 RefSeq:NP_197231.1 UniGene:At.31568
ProteinModelPortal:Q9FFI2 IntAct:Q9FFI2 PRIDE:Q9FFI2
EnsemblPlants:AT5G17290.1 GeneID:831594 KEGG:ath:AT5G17290
TAIR:At5g17290 eggNOG:NOG271554 HOGENOM:HOG000030712
InParanoid:Q9FFI2 KO:K08339 OMA:HFRGYPS PhylomeDB:Q9FFI2
ProtClustDB:CLSN2686331 Genevestigator:Q9FFI2 GermOnline:AT5G17290
PANTHER:PTHR13040 Uniprot:Q9FFI2
Length = 337
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 198/304 (65%), Positives = 237/304 (77%)
Query: 47 MHMEARKYVWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSLP 106
M EA KYVWEGAIPLQIHLH+S+V + RIGYLPLL+ LIKPYF SLP
Sbjct: 1 MAKEAVKYVWEGAIPLQIHLHKSDVASHPAPPPALVLAPRIGYLPLLIPLIKPYFKDSLP 60
Query: 107 PGVDTIWFEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVK 166
PG D+IWF+YKG PLKWY PTGVLFDLLCAEPERPWNLT+HFRGYP ++LIPCEGEDSVK
Sbjct: 61 PGEDSIWFDYKGFPLKWYIPTGVLFDLLCAEPERPWNLTIHFRGYPCNILIPCEGEDSVK 120
Query: 167 WSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDDY 226
W+F+NSLKEA YIINGNCKNVMNMSQSDQ +LW SVMNG+L+AY R+S KLK+ TVED++
Sbjct: 121 WNFVNSLKEAQYIINGNCKNVMNMSQSDQEDLWTSVMNGDLDAYTRLSPKLKMGTVEDEF 180
Query: 227 TVKLN-SSSKSQQGTGETDFAGQVKTGRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFI 285
+ K + SS +SQQ ET+ AGQVKT RIPVRLYV S+++DF++LED P+ID WD IS++
Sbjct: 181 SRKTSLSSPQSQQVVPETEVAGQVKTARIPVRLYVRSLNKDFENLEDVPEIDTWDDISYL 240
Query: 286 NRPVEVRTEEGKCFTLRDAIKTLLPEYFTDKPLFNDESPKLEDEEMNLSSEDAGSNKNTE 345
NRPVE EEGKCFTLRDAIK+LLPE+ D+ + E ++D E S + G K
Sbjct: 241 NRPVEFLKEEGKCFTLRDAIKSLLPEFMGDRAQTSGEERSIDDTEEADGSREMGEIKLVR 300
Query: 346 VEEI 349
++ I
Sbjct: 301 IQGI 304
>ZFIN|ZDB-GENE-040801-149 [details] [associations]
symbol:atg5 "ATG5 autophagy related 5 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0007399 "nervous system
development" evidence=IMP] InterPro:IPR007239 Pfam:PF04106
ZFIN:ZDB-GENE-040801-149 GO:GO:0005737 GO:GO:0006914
PANTHER:PTHR13040 HOGENOM:HOG000007893 HOVERGEN:HBG018731
EMBL:AY398310 IPI:IPI00484591 UniGene:Dr.12686
ProteinModelPortal:Q6TH46 STRING:Q6TH46 DNASU:494180
InParanoid:Q6TH46 NextBio:20865662 ArrayExpress:Q6TH46
Uniprot:Q6TH46
Length = 275
Score = 246 (91.7 bits), Expect = 6.1e-30, Sum P(3) = 6.1e-30
Identities = 56/172 (32%), Positives = 85/172 (49%)
Query: 55 VWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSLPP-GVDTIW 113
VW G IP L E TT R+ YL L+ +K +F + V+ +W
Sbjct: 13 VWFGRIPACFTLSPDE-TTEREAEPYYLLLPRVSYLTLVTDKVKKHFLKVMKAEDVEEMW 71
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FE++G PLKW+ P GVLFDL + PWN+TVHF+ +P L+ C ++ F++ +
Sbjct: 72 FEHEGTPLKWHYPIGVLFDLHASNSALPWNVTVHFKNFPEQDLLHCSTNSVIEAHFMSCI 131
Query: 174 KEA-AYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVED 224
KEA A G N +M + D +LW + N + + ++ KL E+
Sbjct: 132 KEADALKHKGQVIN--DMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEE 181
Score = 56 (24.8 bits), Expect = 6.1e-30, Sum P(3) = 6.1e-30
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 282 ISFINRPVEVRTEEGKCFTLRDAIKTLLPEYFTDKP 317
I + RPV + EG+ TL D +K L P D+P
Sbjct: 201 IQTLFRPV---SSEGQALTLGDLLKELFPAAIEDEP 233
Score = 54 (24.1 bits), Expect = 6.1e-30, Sum P(3) = 6.1e-30
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 363 VRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 238 VMIHGIEPLLETPIQWL 254
>UNIPROTKB|Q9H1Y0 [details] [associations]
symbol:ATG5 "Autophagy protein 5" species:9606 "Homo
sapiens" [GO:0006915 "apoptotic process" evidence=IEA] [GO:0001974
"blood vessel remodeling" evidence=IEA] [GO:0031397 "negative
regulation of protein ubiquitination" evidence=IEA] [GO:0042311
"vasodilation" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0048840 "otolith development"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0060047 "heart contraction"
evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006914
"autophagy" evidence=ISS] [GO:0034045 "pre-autophagosomal structure
membrane" evidence=ISS] [GO:0043687 "post-translational protein
modification" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005776 "autophagic vacuole" evidence=IDA]
[GO:0032480 "negative regulation of type I interferon production"
evidence=TAS] [GO:0045087 "innate immune response" evidence=TAS]
InterPro:IPR007239 Pfam:PF04106 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0043066 GO:GO:0043234 GO:GO:0042493 PDB:4GDK PDB:4GDL
PDBsum:4GDK PDBsum:4GDL GO:GO:0005776 GO:GO:0034045 GO:GO:0000045
GO:GO:0045087 GO:GO:0042311 GO:GO:0001974 GO:GO:0060047
GO:GO:0043687 GO:GO:0031397 GO:GO:0032480 eggNOG:NOG271554
KO:K08339 PANTHER:PTHR13040 CTD:9474 HOGENOM:HOG000007893
HOVERGEN:HBG018731 OrthoDB:EOG4T783Z GO:GO:0048840 GO:GO:0055015
OMA:HYPIGVL EMBL:Y11588 EMBL:AF293841 EMBL:CR749386 EMBL:AL022067
EMBL:AL133509 EMBL:AL138917 EMBL:BC002699 EMBL:BC093011
IPI:IPI00006800 IPI:IPI00220640 RefSeq:NP_004840.1
UniGene:Hs.486063 ProteinModelPortal:Q9H1Y0 SMR:Q9H1Y0
DIP:DIP-29758N IntAct:Q9H1Y0 STRING:Q9H1Y0 PhosphoSite:Q9H1Y0
DMDM:17366828 PaxDb:Q9H1Y0 PRIDE:Q9H1Y0 DNASU:9474
Ensembl:ENST00000343245 Ensembl:ENST00000369070
Ensembl:ENST00000369076 GeneID:9474 KEGG:hsa:9474 UCSC:uc003prf.3
UCSC:uc003prg.3 GeneCards:GC06M106632 HGNC:HGNC:589 HPA:CAB034432
HPA:CAB037309 HPA:HPA042973 MIM:604261 neXtProt:NX_Q9H1Y0
PharmGKB:PA24880 InParanoid:Q9H1Y0 PhylomeDB:Q9H1Y0 ChiTaRS:ATG5
GenomeRNAi:9474 NextBio:35504 ArrayExpress:Q9H1Y0 Bgee:Q9H1Y0
CleanEx:HS_ATG5 Genevestigator:Q9H1Y0 GermOnline:ENSG00000057663
Uniprot:Q9H1Y0
Length = 275
Score = 275 (101.9 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 56/173 (32%), Positives = 93/173 (53%)
Query: 55 VWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T R+ YL L+ +K +F + + IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLLP-RVSYLTLVTDKVKKHFQKVMRQEDISEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D+++ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAIEAHFMSCM 129
Query: 174 KEAAYIINGNCKNVMN-MSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDD 225
KEA + + + V+N M + D +LW + N + + ++ KL E++
Sbjct: 130 KEADALKHKS--QVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPAEEN 180
Score = 55 (24.4 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 363 VRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 238 VMIHGIEPMLETPLQWL 254
>MGI|MGI:1277186 [details] [associations]
symbol:Atg5 "autophagy related 5" species:10090 "Mus
musculus" [GO:0000045 "autophagic vacuole assembly" evidence=IMP]
[GO:0001974 "blood vessel remodeling" evidence=IMP] [GO:0002739
"regulation of cytokine secretion involved in immune response"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005776 "autophagic
vacuole" evidence=ISA;IDA] [GO:0006914 "autophagy" evidence=IMP]
[GO:0009620 "response to fungus" evidence=IMP] [GO:0031397
"negative regulation of protein ubiquitination" evidence=IMP]
[GO:0034045 "pre-autophagosomal structure membrane" evidence=IDA]
[GO:0042311 "vasodilation" evidence=IMP] [GO:0042493 "response to
drug" evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043687 "post-translational protein
modification" evidence=IDA] [GO:0048840 "otolith development"
evidence=IMP] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IMP] [GO:0060047 "heart contraction"
evidence=IMP] InterPro:IPR007239 Pfam:PF04106 MGI:MGI:1277186
GO:GO:0005829 GO:GO:0043066 GO:GO:0043234 GO:GO:0042493
GO:GO:0005776 GO:GO:0034045 GO:GO:0000045 GO:GO:0042311
GO:GO:0009620 GO:GO:0001974 GO:GO:0060047 Reactome:REACT_107772
GO:GO:0043687 GO:GO:0031397 eggNOG:NOG271554 KO:K08339
PANTHER:PTHR13040 CTD:9474 HOGENOM:HOG000007893 HOVERGEN:HBG018731
OrthoDB:EOG4T783Z GO:GO:0048840 GO:GO:0055015
GeneTree:ENSGT00390000004766 OMA:HYPIGVL EMBL:AB048349
EMBL:AK028315 EMBL:BC002166 IPI:IPI00114936 RefSeq:NP_444299.1
UniGene:Mm.22264 ProteinModelPortal:Q99J83 SMR:Q99J83
DIP:DIP-46420N IntAct:Q99J83 STRING:Q99J83 PhosphoSite:Q99J83
PaxDb:Q99J83 PRIDE:Q99J83 DNASU:11793 Ensembl:ENSMUST00000039286
GeneID:11793 KEGG:mmu:11793 UCSC:uc007ezt.1 InParanoid:Q99J83
NextBio:279625 Bgee:Q99J83 CleanEx:MM_ATG5 Genevestigator:Q99J83
GermOnline:ENSMUSG00000038160 GO:GO:0002739 Uniprot:Q99J83
Length = 275
Score = 275 (101.9 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 57/165 (34%), Positives = 90/165 (54%)
Query: 55 VWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T R+ YL L+ +K +F + V IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLLP-RVSYLTLVTDKVKKHFQKVMRQEDVSEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D+V+ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAVEAHFMSCM 129
Query: 174 KEAAYIINGNCKNVMN-MSQSDQVELWRSVMNGNLEAYLRVSSKL 217
KEA + + + V+N M + D +LW + N + + ++ KL
Sbjct: 130 KEADALKHKS--QVINEMQKKDHKQLWMGLQNDRFDQFWAINRKL 172
Score = 55 (24.4 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 363 VRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 238 VMIHGIEPMLETPLQWL 254
>UNIPROTKB|F6V678 [details] [associations]
symbol:ATG5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006914 "autophagy" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR007239 Pfam:PF04106
GO:GO:0005737 GO:GO:0006914 KO:K08339 PANTHER:PTHR13040 CTD:9474
GeneTree:ENSGT00390000004766 OMA:HYPIGVL Ensembl:ENSCAFT00000005953
EMBL:AAEX03008581 RefSeq:XP_854294.1 GeneID:610868 KEGG:cfa:610868
Uniprot:F6V678
Length = 275
Score = 274 (101.5 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 56/173 (32%), Positives = 93/173 (53%)
Query: 55 VWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T R+ YL L+ +K +F + + IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLLP-RVSYLTLVTDKVKKHFQKVMRQEDISEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D+++ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAIEAHFMSCV 129
Query: 174 KEAAYIINGNCKNVMN-MSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDD 225
KEA + + + V+N M + D +LW + N + + ++ KL E++
Sbjct: 130 KEADALKHKS--QVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPAEEN 180
Score = 55 (24.4 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 363 VRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 238 VMIHGIEPMLETPLQWL 254
>UNIPROTKB|Q3MQ24 [details] [associations]
symbol:ATG5 "Autophagy protein 5" species:9913 "Bos taurus"
[GO:0060047 "heart contraction" evidence=IEA] [GO:0055015
"ventricular cardiac muscle cell development" evidence=IEA]
[GO:0048840 "otolith development" evidence=IEA] [GO:0043687
"post-translational protein modification" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042311
"vasodilation" evidence=IEA] [GO:0034045 "pre-autophagosomal
structure membrane" evidence=IEA] [GO:0031397 "negative regulation
of protein ubiquitination" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IEA] [GO:0001974 "blood vessel remodeling"
evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] InterPro:IPR007239 Pfam:PF04106 GO:GO:0043066
GO:GO:0042493 GO:GO:0005776 GO:GO:0034045 GO:GO:0000045
GO:GO:0042311 GO:GO:0001974 GO:GO:0060047 GO:GO:0043687
GO:GO:0031397 eggNOG:NOG271554 KO:K08339 PANTHER:PTHR13040
EMBL:AM086994 EMBL:BC102770 IPI:IPI00694862 RefSeq:NP_001029751.2
UniGene:Bt.27505 ProteinModelPortal:Q3MQ24 STRING:Q3MQ24
PRIDE:Q3MQ24 GeneID:532686 KEGG:bta:532686 CTD:9474
HOGENOM:HOG000007893 HOVERGEN:HBG018731 InParanoid:Q3MQ24
OrthoDB:EOG4T783Z NextBio:20875771 GO:GO:0048840 GO:GO:0055015
Uniprot:Q3MQ24
Length = 275
Score = 271 (100.5 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 56/173 (32%), Positives = 92/173 (53%)
Query: 55 VWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T R+ YL L+ +K +F + + IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLLP-RVSYLTLVTDKVKKHFQKVMRQEDISEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D ++ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDVIEAHFMSCV 129
Query: 174 KEAAYIINGNCKNVMN-MSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDD 225
KEA + + + V+N M + D +LW + N + + ++ KL E++
Sbjct: 130 KEADALKHKS--QVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPAEEN 180
Score = 55 (24.4 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 363 VRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 238 VMIHGIEPMLETPLQWL 254
>RGD|1359580 [details] [associations]
symbol:Atg5 "autophagy related 5" species:10116 "Rattus
norvegicus" [GO:0000045 "autophagic vacuole assembly"
evidence=ISO;IMP] [GO:0001974 "blood vessel remodeling"
evidence=ISO] [GO:0002739 "regulation of cytokine secretion
involved in immune response" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0006914
"autophagy" evidence=ISO;IMP] [GO:0009620 "response to fungus"
evidence=ISO] [GO:0031397 "negative regulation of protein
ubiquitination" evidence=ISO] [GO:0034045 "pre-autophagosomal
structure membrane" evidence=ISO] [GO:0042311 "vasodilation"
evidence=ISO] [GO:0042493 "response to drug" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0043234 "protein complex" evidence=IDA]
[GO:0043687 "post-translational protein modification" evidence=ISO]
[GO:0048840 "otolith development" evidence=ISO] [GO:0055015
"ventricular cardiac muscle cell development" evidence=ISO]
[GO:0060047 "heart contraction" evidence=ISO] InterPro:IPR007239
Pfam:PF04106 RGD:1359580 GO:GO:0043066 GO:GO:0043234 GO:GO:0042493
GO:GO:0005776 GO:GO:0034045 GO:GO:0000045 GO:GO:0042311
GO:GO:0001974 GO:GO:0060047 GO:GO:0043687 GO:GO:0031397
eggNOG:NOG271554 PANTHER:PTHR13040 HOGENOM:HOG000007893
HOVERGEN:HBG018731 OrthoDB:EOG4T783Z GO:GO:0048840 GO:GO:0055015
EMBL:AM087012 IPI:IPI00367908 UniGene:Rn.98385 IntAct:Q3MQ06
STRING:Q3MQ06 UCSC:RGD:1359580 InParanoid:Q3MQ06
ArrayExpress:Q3MQ06 Genevestigator:Q3MQ06 Uniprot:Q3MQ06
Length = 275
Score = 271 (100.5 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 57/165 (34%), Positives = 90/165 (54%)
Query: 55 VWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T R+ YL L+ +K +F + V IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLLP-RVSYLTLVTDKVKKHFQKVMRQEDVSEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D+V+ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPCKDAVEAHFMSCV 129
Query: 174 KEAAYIINGNCKNVMN-MSQSDQVELWRSVMNGNLEAYLRVSSKL 217
KEA + + + V+N M + D +LW + N + + ++ KL
Sbjct: 130 KEADALKHKS--QVINEMQRKDHKQLWMGLQNDRFDQFWTINRKL 172
Score = 54 (24.1 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 363 VRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 238 VMIHGIEPLLETPLQWL 254
>UNIPROTKB|F1RVE4 [details] [associations]
symbol:ATG5 "Autophagy protein 5" species:9823 "Sus scrofa"
[GO:0060047 "heart contraction" evidence=IEA] [GO:0055015
"ventricular cardiac muscle cell development" evidence=IEA]
[GO:0048840 "otolith development" evidence=IEA] [GO:0043687
"post-translational protein modification" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042311
"vasodilation" evidence=IEA] [GO:0034045 "pre-autophagosomal
structure membrane" evidence=IEA] [GO:0031397 "negative regulation
of protein ubiquitination" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IEA] [GO:0001974 "blood vessel remodeling"
evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] InterPro:IPR007239 Pfam:PF04106 GO:GO:0043066
GO:GO:0042493 GO:GO:0005776 GO:GO:0034045 GO:GO:0000045
GO:GO:0042311 GO:GO:0001974 GO:GO:0060047 GO:GO:0043687
GO:GO:0031397 PANTHER:PTHR13040 GO:GO:0048840 GO:GO:0055015
GeneTree:ENSGT00390000004766 Ensembl:ENSSSCT00000004831
Uniprot:F1RVE4
Length = 275
Score = 270 (100.1 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 55/158 (34%), Positives = 86/158 (54%)
Query: 55 VWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T R+ YL L+ +K +F + + IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLLP-RVSYLTLVTDKVKKHFQKVMRQEDISEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D ++ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDVIEAHFMSCV 129
Query: 174 KEAAYIINGNCKNVMN-MSQSDQVELWRSVMNGNLEAY 210
KEA + + + V+N M + D +LW + NG +Y
Sbjct: 130 KEADALKHKS--QVINEMQKKDHKQLWMGLQNGKYSSY 165
Score = 55 (24.4 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 363 VRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 238 VMIHGIEPMLETPLQWL 254
>UNIPROTKB|I3LTI9 [details] [associations]
symbol:ATG5 "Autophagy protein 5" species:9823 "Sus scrofa"
[GO:0006914 "autophagy" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR007239 Pfam:PF04106 GO:GO:0005737
GO:GO:0006914 PANTHER:PTHR13040 GeneTree:ENSGT00390000004766
OMA:HYPIGVL Ensembl:ENSSSCT00000025776 Uniprot:I3LTI9
Length = 275
Score = 269 (99.8 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 56/165 (33%), Positives = 88/165 (53%)
Query: 55 VWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T R+ YL L+ +K +F + + IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLLP-RVSYLTLVTDKVKKHFQKVMRQEDISEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D ++ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDVIEAHFMSCV 129
Query: 174 KEAAYIINGNCKNVMN-MSQSDQVELWRSVMNGNLEAYLRVSSKL 217
KEA + + + V+N M + D +LW + NG + + KL
Sbjct: 130 KEADALKHKS--QVINEMQKKDHKQLWMGLQNGRFQKFWTGMKKL 172
Score = 55 (24.4 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 363 VRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 238 VMIHGIEPMLETPLQWL 254
>UNIPROTKB|Q3MQ04 [details] [associations]
symbol:ATG5 "Autophagy protein 5" species:9823 "Sus scrofa"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] InterPro:IPR007239 Pfam:PF04106 GO:GO:0005737
GO:GO:0006914 KO:K08339 PANTHER:PTHR13040 CTD:9474
HOVERGEN:HBG018731 OrthoDB:EOG4T783Z EMBL:AM087014
RefSeq:NP_001032229.1 UniGene:Ssc.83739 STRING:Q3MQ04 GeneID:641362
KEGG:ssc:641362 eggNOG:NOG300809 HOGENOM:HOG000208012
Uniprot:Q3MQ04
Length = 275
Score = 269 (99.8 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 53/164 (32%), Positives = 87/164 (53%)
Query: 55 VWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T R+ YL L+ +K +F + + IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLLP-RVSYLTLVTDKVKKHFQKVMRQEDISEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D ++ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASISALPWNITVHFKSFPEKDLLHCPSKDVIEAHFMSCV 129
Query: 174 KEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKL 217
KEA + + + +M + D +LW + N + + ++ KL
Sbjct: 130 KEAD-ALKHKSRVISDMQRKDHKQLWMGLQNDRFDQFWTINRKL 172
Score = 54 (24.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 363 VRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 238 VMIHGIEPLLETPLQWL 254
>UNIPROTKB|Q5ZHW2 [details] [associations]
symbol:ATG5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000045 "autophagic vacuole assembly" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0005776
"autophagic vacuole" evidence=IEA] [GO:0031397 "negative regulation
of protein ubiquitination" evidence=IEA] [GO:0034045
"pre-autophagosomal structure membrane" evidence=IEA] [GO:0042311
"vasodilation" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043687 "post-translational protein
modification" evidence=IEA] [GO:0048840 "otolith development"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0060047 "heart contraction"
evidence=IEA] [GO:0002218 "activation of innate immune response"
evidence=TAS] InterPro:IPR007239 Pfam:PF04106 GO:GO:0043066
GO:GO:0042493 GO:GO:0005776 GO:GO:0034045 GO:GO:0000045
GO:GO:0043687 GO:GO:0002218 GO:GO:0031397 eggNOG:NOG271554
KO:K08339 PANTHER:PTHR13040 CTD:9474 HOGENOM:HOG000007893
HOVERGEN:HBG018731 OrthoDB:EOG4T783Z GeneTree:ENSGT00390000004766
OMA:HYPIGVL Reactome:REACT_147795 EMBL:AC147720 EMBL:AJ721022
IPI:IPI00582382 RefSeq:NP_001006409.1 UniGene:Gga.4155
STRING:Q5ZHW2 Ensembl:ENSGALT00000024823 GeneID:421784
KEGG:gga:421784 InParanoid:Q5ZHW2 NextBio:20824505 Uniprot:Q5ZHW2
Length = 275
Score = 264 (98.0 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 58/172 (33%), Positives = 90/172 (52%)
Query: 55 VWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T RI YL L+ +K +F + V+ IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLLP-RISYLTLVTDKVKKHFQKVMRQEEVNEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDL + PW++TVHF+ +P L+ C +D ++ F+ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLHASNTALPWSITVHFKNFPEKDLLHCHSKDVIEAHFMACI 129
Query: 174 KEAAYIINGNCKNVMN-MSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVED 224
KEA + + + V+N M + D +LW + N E + ++ KL ED
Sbjct: 130 KEADALKHKS--QVINEMQKKDHKQLWMGLQNDKFEQFWAINRKLMEYPPED 179
Score = 55 (24.4 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 363 VRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 238 VMIHGIEPMLETPLQWL 254
>UNIPROTKB|F1LPF9 [details] [associations]
symbol:Atg5 "Autophagy protein 5" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] InterPro:IPR007239 Pfam:PF04106
RGD:1359580 GO:GO:0043066 GO:GO:0042493 GO:GO:0005776 GO:GO:0034045
GO:GO:0000045 GO:GO:0042311 GO:GO:0001974 GO:GO:0060047
GO:GO:0043687 GO:GO:0031397 PANTHER:PTHR13040 GO:GO:0048840
GO:GO:0055015 IPI:IPI01016445 Ensembl:ENSRNOT00000000354
ArrayExpress:F1LPF9 Uniprot:F1LPF9
Length = 245
Score = 244 (91.0 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 48/134 (35%), Positives = 79/134 (58%)
Query: 86 RIGYLPLLVGLIKPYFGSSL-PPGVDTIWFEYKGLPLKWYTPTGVLFDLLCAEPERPWNL 144
R+ YL L+ +K +F + V IWFEY+G PLKW+ P G+LFDLL + PWN+
Sbjct: 11 RVSYLTLVTDKVKKHFQKVMRQEDVSEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNI 70
Query: 145 TVHFRGYPVHVLIPCEGEDSVKWSFINSLKEAAYIINGNCKNVMN-MSQSDQVELWRSVM 203
TV+F+ +P L+ C +D+V+ F++ +KEA + + + V+N M + D +LW +
Sbjct: 71 TVYFKSFPEKDLLHCPCKDAVEAHFMSCVKEADALKHKS--QVINEMQRKDHKQLWMGLQ 128
Query: 204 NGNLEAYLRVSSKL 217
N + + ++ KL
Sbjct: 129 NDRFDQFWTINRKL 142
Score = 54 (24.1 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 363 VRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 208 VMIHGIEPLLETPLQWL 224
>UNIPROTKB|E2QRW5 [details] [associations]
symbol:ATG5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060047 "heart contraction" evidence=IEA]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IEA] [GO:0048840 "otolith development" evidence=IEA]
[GO:0043687 "post-translational protein modification" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042311 "vasodilation" evidence=IEA] [GO:0034045
"pre-autophagosomal structure membrane" evidence=IEA] [GO:0031397
"negative regulation of protein ubiquitination" evidence=IEA]
[GO:0005776 "autophagic vacuole" evidence=IEA] [GO:0001974 "blood
vessel remodeling" evidence=IEA] [GO:0000045 "autophagic vacuole
assembly" evidence=IEA] InterPro:IPR007239 Pfam:PF04106
GO:GO:0043066 GO:GO:0042493 GO:GO:0005776 GO:GO:0034045
GO:GO:0000045 GO:GO:0042311 GO:GO:0001974 GO:GO:0060047
GO:GO:0043687 GO:GO:0031397 PANTHER:PTHR13040 GO:GO:0048840
GO:GO:0055015 Ensembl:ENSCAFT00000005953 Uniprot:E2QRW5
Length = 230
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 56/173 (32%), Positives = 93/173 (53%)
Query: 55 VWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T R+ YL L+ +K +F + + IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLLP-RVSYLTLVTDKVKKHFQKVMRQEDISEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D+++ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAIEAHFMSCV 129
Query: 174 KEAAYIINGNCKNVMN-MSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDD 225
KEA + + + V+N M + D +LW + N + + ++ KL E++
Sbjct: 130 KEADALKHKS--QVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPAEEN 180
>DICTYBASE|DDB_G0289881 [details] [associations]
symbol:atg5 "autophagy protein 5" species:44689
"Dictyostelium discoideum" [GO:0031288 "sorocarp morphogenesis"
evidence=IMP] [GO:0030587 "sorocarp development" evidence=IMP]
[GO:0030435 "sporulation resulting in formation of a cellular
spore" evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006914
"autophagy" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR007239 Pfam:PF04106 dictyBase:DDB_G0289881
GO:GO:0005737 GO:GO:0016020 GO:GO:0015031 GenomeReviews:CM000154_GR
GO:GO:0030435 EMBL:AAFI02000149 GO:GO:0006995 GO:GO:0016236
GO:GO:0031288 eggNOG:NOG271554 KO:K08339 PANTHER:PTHR13040
EMBL:AY191012 RefSeq:XP_635980.1 ProteinModelPortal:Q54GT9
PRIDE:Q54GT9 EnsemblProtists:DDB0191390 GeneID:8627395
KEGG:ddi:DDB_G0289881 OMA:MAPRNSY ProtClustDB:CLSZ2846636
Uniprot:Q54GT9
Length = 398
Score = 178 (67.7 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 31/85 (36%), Positives = 48/85 (56%)
Query: 50 EARKYVWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSLPPGV 109
+ ++ +WEG IP+ L ++T+ R Y PL+ L+K YF SS +
Sbjct: 7 DIKRSIWEGKIPIVFTLSPDDLTSHLSPSPYTLMAPRNSYFPLITSLVKDYFSSSTLVLL 66
Query: 110 DTIWFEYKGLPLKWYTPTGVLFDLL 134
D +W EY+G+PLKW+ P GVL+D +
Sbjct: 67 DEMWLEYRGIPLKWHLPIGVLYDTI 91
Score = 136 (52.9 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 139 ERP-WNLTVHFRGYPVHVLIPCEGEDSVKWSFINSLKEAAYIINGNCKNVMNMSQSDQVE 197
E+P WN+ VHF+ YP +L+ C +SV+ + N LKEA +I G+ + N++ + +
Sbjct: 151 EQPYWNIVVHFQSYPDRILLRCPNIESVRTYYKNVLKEANFIKQGDITKINNLNINQSND 210
Query: 198 LWRSVMNGNLEAYLRVSSKL 217
LW + + + + + V+ KL
Sbjct: 211 LWDGLKSHDYDKFWSVNKKL 230
Score = 48 (22.0 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 320 NDESPKLEDEEMNLSSEDAGSNKNTEVEEILYEHVTRNAEIKLVRIQGIEPKLEIPFSWV 379
N+ + +++ N ++ + E +L NAE K IQGI+P L+ W+
Sbjct: 310 NNNNNNVDNSIENSLNQTNVESAEPEFSNLLQYIKATNAEYK---IQGIQPSLKSSAVWL 366
Score = 44 (20.5 bits), Expect = 2.9e-13, Sum P(3) = 2.9e-13
Identities = 13/56 (23%), Positives = 25/56 (44%)
Query: 141 PWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSLKEAAYIINGNCKNVMNMSQSDQV 196
P L ++++ P+ LIP E+ V+ + N Y N N N + ++ +
Sbjct: 242 PIRLIINYKP-PIQELIPVFDENLVELTLENLFSRIPYESFSNFLNYNNNNNNNNI 296
>UNIPROTKB|G8JKW2 [details] [associations]
symbol:ATG5 "Autophagy protein 5" species:9913 "Bos taurus"
[GO:0060047 "heart contraction" evidence=IEA] [GO:0055015
"ventricular cardiac muscle cell development" evidence=IEA]
[GO:0048840 "otolith development" evidence=IEA] [GO:0043687
"post-translational protein modification" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042311
"vasodilation" evidence=IEA] [GO:0034045 "pre-autophagosomal
structure membrane" evidence=IEA] [GO:0031397 "negative regulation
of protein ubiquitination" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IEA] [GO:0001974 "blood vessel remodeling"
evidence=IEA] [GO:0000045 "autophagic vacuole assembly"
evidence=IEA] InterPro:IPR007239 Pfam:PF04106 GO:GO:0043066
GO:GO:0042493 GO:GO:0005776 GO:GO:0034045 GO:GO:0000045
GO:GO:0042311 GO:GO:0001974 GO:GO:0060047 GO:GO:0043687
GO:GO:0031397 PANTHER:PTHR13040 GO:GO:0048840 GO:GO:0055015
GeneTree:ENSGT00390000004766 EMBL:DAAA02025978 EMBL:DAAA02025979
Ensembl:ENSBTAT00000007100 OMA:MGLQNXG Uniprot:G8JKW2
Length = 159
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 53/152 (34%), Positives = 83/152 (54%)
Query: 55 VWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T R+ YL L+ +K +F + + IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLLP-RVSYLTLVTDKVKKHFQKVMRQEDISEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D ++ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDVIEAHFMSCV 129
Query: 174 KEAAYIINGNCKNVMN-MSQSDQVELWRSVMN 204
KEA + + + V+N M + D +LW + N
Sbjct: 130 KEADALKHKS--QVINEMQKKDHKQLWMGLQN 159
>FB|FBgn0029943 [details] [associations]
symbol:Atg5 "Autophagy-specific gene 5" species:7227
"Drosophila melanogaster" [GO:0006914 "autophagy" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=IEA;NAS] [GO:0048102 "autophagic
cell death" evidence=IEP] [GO:0035071 "salivary gland cell
autophagic cell death" evidence=IEP] [GO:0003674
"molecular_function" evidence=ND] [GO:0016236 "macroautophagy"
evidence=IMP] InterPro:IPR007239 Pfam:PF04106 GO:GO:0005737
GO:GO:0015031 HOGENOM:HOG000255147 EMBL:AE014298 GO:GO:0035071
GO:GO:0016236 eggNOG:NOG271554 KO:K08339 PANTHER:PTHR13040 CTD:9474
EMBL:AY069596 RefSeq:NP_572390.1 UniGene:Dm.33486
ProteinModelPortal:Q9W3R7 SMR:Q9W3R7 DIP:DIP-20667N IntAct:Q9W3R7
MINT:MINT-285488 STRING:Q9W3R7 PaxDb:Q9W3R7
EnsemblMetazoa:FBtr0071065 GeneID:31666 KEGG:dme:Dmel_CG1643
FlyBase:FBgn0029943 GeneTree:ENSGT00390000004766 InParanoid:Q9W3R7
OMA:HYPIGVL OrthoDB:EOG4NVX24 PhylomeDB:Q9W3R7 GenomeRNAi:31666
NextBio:774730 Bgee:Q9W3R7 GermOnline:CG1643 Uniprot:Q9W3R7
Length = 269
Score = 206 (77.6 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 46/171 (26%), Positives = 83/171 (48%)
Query: 50 EARKYVWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGS--SLPP 107
E + +WEG I + E+ R+ YLPL+ ++ YF S
Sbjct: 6 EVLRMIWEGQIGICFQADRDEIV-GIKPEPFYLMISRLSYLPLVTDKVRKYFSRYISAEH 64
Query: 108 GVDTIWFEYKGLPLKWYTPTGVLFDLLCAEPER-PWNLTVHFRGYPVHVLIPCEGEDSVK 166
+WF++ G PL+ + P GVL+DLL E + PW LT+HF +P +L+ ++ ++
Sbjct: 65 QDGAVWFDFNGTPLRLHYPIGVLYDLLHPEEDSTPWCLTIHFSKFPEDMLVKLNSKELLE 124
Query: 167 WSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKL 217
+++ LKEA ++ + M + D +LW ++N + + V+ +L
Sbjct: 125 SHYMSCLKEAD-VLKHRGLVISAMQKKDHNQLWLGLVNEKFDQFWAVNRRL 174
>ASPGD|ASPL0000030052 [details] [associations]
symbol:AN5174 species:162425 "Emericella nidulans"
[GO:0032258 "CVT pathway" evidence=IEA] [GO:0006501 "C-terminal
protein lipidation" evidence=IEA] [GO:0030437 "ascospore formation"
evidence=IEA] [GO:0034727 "piecemeal microautophagy of nucleus"
evidence=IEA] [GO:0000422 "mitochondrion degradation" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0019776 "Atg8 ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000407
"pre-autophagosomal structure" evidence=IEA] [GO:0005776
"autophagic vacuole" evidence=IEA] InterPro:IPR007239 Pfam:PF04106
GO:GO:0005737 GO:GO:0016020 GO:GO:0015031 GO:GO:0006914
EMBL:BN001305 KO:K08339 PANTHER:PTHR13040 EMBL:AACD01000089
RefSeq:XP_662778.1 GeneID:2871463 KEGG:ani:AN5174.2
HOGENOM:HOG000034157 OMA:RVMQTLV OrthoDB:EOG4NW2V5 Uniprot:Q5B2Q6
Length = 334
Score = 204 (76.9 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 43/120 (35%), Positives = 70/120 (58%)
Query: 113 WFEYKGLPLKWYTPTGVLFDLLC-AEP-------------ERPWNLTVHFRGYPVHVLIP 158
WF ++G+PLKW+ P G+L+DL AEP + PW L VHF +P L+
Sbjct: 75 WFSFEGVPLKWHYPVGLLYDLYAGAEPATKSSETEALDDEQLPWRLVVHFGDWPDAELVR 134
Query: 159 CEGEDSVKW-SFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKL 217
+ + +V +FINS+KEA ++ NG K +M +S+ D LW++V + +L ++ R+ + L
Sbjct: 135 LDAQGTVMHDAFINSVKEADFVRNGTAKGIMTLSKDDSSGLWKAVQDVDLPSFQRIMNIL 194
Score = 169 (64.5 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 52 RKYVWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSL-PPGVD 110
+K VWEG IPL+I L SE T RI YLP L+ +K +F SSL P
Sbjct: 10 QKSVWEGQIPLKIVLAPSESRTYDQTDPYLISYPRISYLPSLLPRLKAFFSSSLIDPTAS 69
Query: 111 TI---WFEYKGLPLKWYTPTGVLFDLLC-AEP 138
WF ++G+PLKW+ P G+L+DL AEP
Sbjct: 70 QPHDGWFSFEGVPLKWHYPVGLLYDLYAGAEP 101
>POMBASE|SPBC4B4.10c [details] [associations]
symbol:atg5 "autophagy associated protein Atg5"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006914
"autophagy" evidence=IMP] [GO:0006995 "cellular response to
nitrogen starvation" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IC] [GO:0030437
"ascospore formation" evidence=IMP] [GO:0032258 "CVT pathway"
evidence=ISO] InterPro:IPR007239 Pfam:PF04106 PomBase:SPBC4B4.10c
GO:GO:0005829 GO:GO:0005634 GO:GO:0007126 GO:GO:0016020
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0030437 GO:GO:0006995
GO:GO:0016236 GO:GO:0032258 eggNOG:NOG271554 KO:K08339
PANTHER:PTHR13040 OMA:RVMQTLV OrthoDB:EOG4NW2V5 PIR:T40482
RefSeq:NP_596427.1 ProteinModelPortal:O74971 STRING:O74971
EnsemblFungi:SPBC4B4.10c.1 GeneID:2540814 KEGG:spo:SPBC4B4.10c
NextBio:20801932 Uniprot:O74971
Length = 261
Score = 182 (69.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 44/169 (26%), Positives = 83/169 (49%)
Query: 55 VWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSLPPGVDTIWF 114
+W G I ++I +E +I LP + L+ P S+P + W
Sbjct: 14 LWNGTISVRID-YEGNSLAYLANVPRQSYFAQI--LPNVQRLLAP----SIP--LSECWL 64
Query: 115 EYKGLPLKWYTPTGVLFDLLCA-EPERP-----WNLTVHFRGYPVHVLIPCEGEDSVKWS 168
+Y G+PLKW+ P G+LFDLL +P+ P W + + +P ++ E D+ +
Sbjct: 65 DYNGVPLKWHWPVGLLFDLLTVFDPDTPRAPVLWRIQLRSGLFPTTKILQMETMDTFRTY 124
Query: 169 FINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKL 217
F N LKE+ Y+ NG+ ++ +S+++ W +++N + + ++ K+
Sbjct: 125 FFNCLKESDYVRNGSSSGIIALSKAETDTYWNAILNHDYYDFRPIAIKI 173
>UNIPROTKB|Q525E4 [details] [associations]
symbol:ATG5 "Autophagy protein 5" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR007239 Pfam:PF04106 GO:GO:0005737 GO:GO:0016020
GO:GO:0015031 GO:GO:0006914 EMBL:CM001231 GO:GO:0043581
eggNOG:NOG271554 KO:K08339 PANTHER:PTHR13040 OrthoDB:EOG4NW2V5
EMBL:EF486490 RefSeq:XP_003709895.1 ProteinModelPortal:Q525E4
EnsemblFungi:MGG_09262T0 GeneID:2680280 KEGG:mgr:MGG_09262
Uniprot:Q525E4
Length = 314
Score = 163 (62.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 41/125 (32%), Positives = 70/125 (56%)
Query: 94 VGLIKPYFGSSLPPGVDT-IWFEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYP 152
+ L+ P + LPP + F ++G+ L+ P G+L DL +P PW LTV +G
Sbjct: 95 LSLLLPRIRAFLPPSIPAPTSFHHEGIALR-ALPLGLLVDLY--QPTLPWRLTVD-QGDD 150
Query: 153 VHVLIPCEGEDSVKWSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLR 212
HV G+ +F+N +KEA ++ NG+ K +M MS++D LW +V + + A+ R
Sbjct: 151 WHV-----GD-----TFLNGVKEADFVRNGHAKQIMGMSKADTTALWNAVRDADYPAWAR 200
Query: 213 VSSKL 217
++++L
Sbjct: 201 INARL 205
>CGD|CAL0000453 [details] [associations]
symbol:orf19.3677 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000407
"pre-autophagosomal structure" evidence=IEA] [GO:0005776
"autophagic vacuole" evidence=IEA] [GO:0032258 "CVT pathway"
evidence=IEA] [GO:0006501 "C-terminal protein lipidation"
evidence=IEA] [GO:0030437 "ascospore formation" evidence=IEA]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IEA]
[GO:0000422 "mitochondrion degradation" evidence=IEA] [GO:0006995
"cellular response to nitrogen starvation" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0019776 "Atg8 ligase
activity" evidence=IEA] InterPro:IPR007239 Pfam:PF04106
CGD:CAL0000453 GO:GO:0005737 GO:GO:0016020 GO:GO:0015031
GO:GO:0006914 eggNOG:NOG271554 KO:K08339 PANTHER:PTHR13040
EMBL:AACQ01000118 EMBL:AACQ01000119 RefSeq:XP_713737.1
RefSeq:XP_713771.1 ProteinModelPortal:Q59VY1 STRING:Q59VY1
GeneID:3644593 GeneID:3644619 KEGG:cal:CaO19.11161
KEGG:cal:CaO19.3677 Uniprot:Q59VY1
Length = 278
Score = 100 (40.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 25/100 (25%), Positives = 54/100 (54%)
Query: 142 WNLTVHFRG-YPVHVLIPCE----GEDSVKWS------FINSLKEAAYIINGNCKNVMNM 190
W +++ + YP+ +I G+ + + +N LK++ +++NG K +M +
Sbjct: 105 WTISMKYEPVYPIEYIISFNEKLAGDGQIDYMKTMNRILMNQLKQSCFVLNGTAKPIMQL 164
Query: 191 SQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDDYTVKL 230
S+++ +LW+S+++ NL + V +K K+I D VK+
Sbjct: 165 SEANTNQLWKSLISRNLGDF-NVLNK-KIIKTIDRIPVKI 202
Score = 92 (37.4 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 50 EARKYVWEGAIPLQIHLH-ESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFGSSLPPG 108
E +K +W G+I ++I L+ E ++ + P L+ + + +++
Sbjct: 9 EIKKKLWNGSINVKILLNIEDQIIEYLLTIPRNSYFPTV--FPQLIRYFQNFI-TTIELS 65
Query: 109 VDTIWFEYKGLPLKWYTPTGVLFDLL 134
IW E++ +PLKW P GVL+D L
Sbjct: 66 KVPIWLEFEEVPLKWNLPVGVLYDYL 91
>WB|WBGene00022152 [details] [associations]
symbol:atg-5 species:6239 "Caenorhabditis elegans"
[GO:0006914 "autophagy" evidence=IEA;IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0070265 "necrotic cell death" evidence=IMP]
InterPro:IPR007239 Pfam:PF04106 GO:GO:0005737 GO:GO:0006914
GO:GO:0070265 eggNOG:NOG271554 PANTHER:PTHR13040
HOGENOM:HOG000007893 GeneTree:ENSGT00390000004766 OMA:HYPIGVL
EMBL:FO080942 RefSeq:NP_490885.3 ProteinModelPortal:Q3V5I7
STRING:Q3V5I7 PaxDb:Q3V5I7 PRIDE:Q3V5I7
EnsemblMetazoa:Y71G12B.12a.1 EnsemblMetazoa:Y71G12B.12a.2
GeneID:171735 KEGG:cel:CELE_Y71G12B.12 CTD:171735
WormBase:Y71G12B.12a InParanoid:Q3V5I7 NextBio:872475
ArrayExpress:Q3V5I7 Uniprot:Q3V5I7
Length = 275
Score = 146 (56.5 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 47/177 (26%), Positives = 74/177 (41%)
Query: 47 MHMEARKYVWEGAIPLQIHLHESEVTTXXXXXXXXXXXXRIGYLPLLVGLIKPYFG---S 103
M E + VWE +P Q L +S T R YL L + + F
Sbjct: 1 MDYEVCRKVWESHVPCQFTL-QSSGGTHGEPLPFYTMLPRFSYLALAIQKVLSSFNRRDD 59
Query: 104 SLPPGVDTIWFEYKGLPLKWYTPTGVLFDLL-CAEPERPWNLTVHFRGYPVHVLIPCEGE 162
D +W E+ G+PLK Y P GV++D +E + + V P +
Sbjct: 60 GEKVHSDKMWLEHNGIPLKMYIPIGVIYDQANLSENDSILEIIVRTSQPPPQFQMV--DR 117
Query: 163 DSVKWSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMN--GNLEAYLRVSSKL 217
D ++ F+ ++KEA Y+ + NM + + +LWRSV N N + + + KL
Sbjct: 118 DMMEAMFMQNIKEADYL-KTKAEITKNMMKDESAQLWRSVCNIPDNFDEFWTIVQKL 173
>SGD|S000006070 [details] [associations]
symbol:ATG5 "Conserved protein involved in autophagy and the
Cvt pathway" species:4932 "Saccharomyces cerevisiae" [GO:0006914
"autophagy" evidence=IEA] [GO:0032258 "CVT pathway" evidence=IMP]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0006501 "C-terminal
protein lipidation" evidence=IDA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0000407
"pre-autophagosomal structure" evidence=IDA] [GO:0019776 "Atg8
ligase activity" evidence=IDA] [GO:0000422 "mitochondrion
degradation" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005776 "autophagic vacuole" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0034045 "pre-autophagosomal structure membrane" evidence=IEA]
[GO:0034274 "Atg12-Atg5-Atg16 complex" evidence=IDA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007239 Pfam:PF04106 SGD:S000006070 GO:GO:0005829
GO:GO:0005776 GO:GO:0034045 GO:GO:0016787 EMBL:BK006949
GO:GO:0000422 EMBL:X96770 GO:GO:0016236 GO:GO:0032258 GO:GO:0034727
GO:GO:0000407 GO:GO:0006501 PDB:3W1S PDBsum:3W1S GO:GO:0034274
PDB:2DYM PDB:2DYO PDBsum:2DYM PDBsum:2DYO eggNOG:NOG271554
KO:K08339 PANTHER:PTHR13040 GeneTree:ENSGT00390000004766
OrthoDB:EOG4NW2V5 EMBL:D83519 EMBL:Z73505 PIR:S65160
RefSeq:NP_015176.1 ProteinModelPortal:Q12380 SMR:Q12380
DIP:DIP-1195N IntAct:Q12380 MINT:MINT-388341 STRING:Q12380
EnsemblFungi:YPL149W GeneID:855954 KEGG:sce:YPL149W CYGD:YPL149w
OMA:LWNGSIN EvolutionaryTrace:Q12380 NextBio:980741
Genevestigator:Q12380 GermOnline:YPL149W Uniprot:Q12380
Length = 294
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 38/147 (25%), Positives = 67/147 (45%)
Query: 87 IGYLPLLVGLIKPYFG-SSLPPGVDTIWFEYKGLPLKWYTPTGVLFDLLCAEP------- 138
+ Y+PL+ IK + L WFE+ P+ W P GVLFD L +
Sbjct: 46 VNYMPLIWNKIKSFLSFDPLTDSEKYFWFEHNKTPIPWNYPVGVLFDCLAGKSATFTTSF 105
Query: 139 ERPWN-----LTVHF-RGYPVH-VLIPCEGEDSVKWSF-INSLKEAAYIINGNCKNVMNM 190
E L +H G + +IP + F + K+ +I+NG+ K +M++
Sbjct: 106 ENQVKDVLTFLRIHLVMGDSLPPTIIPIASSKTQAEKFWFHQWKQVCFILNGSSKAIMSL 165
Query: 191 SQSDQVELWRSVMNGNLEAYLRVSSKL 217
S ++ + W SV+ N + ++ +S+K+
Sbjct: 166 SVNEARKFWGSVITRNFQDFIEISNKI 192
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 379 347 0.00098 116 3 11 22 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 625 (66 KB)
Total size of DFA: 262 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.89u 0.13s 31.02t Elapsed: 00:00:01
Total cpu time: 30.89u 0.13s 31.02t Elapsed: 00:00:01
Start: Mon May 20 18:35:08 2013 End: Mon May 20 18:35:09 2013