BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035508
(379 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FFI2|ATG5_ARATH Autophagy protein 5 OS=Arabidopsis thaliana GN=ATG5 PE=2 SV=1
Length = 337
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/334 (67%), Positives = 263/334 (78%), Gaps = 20/334 (5%)
Query: 47 MHMEARKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLP 106
M EA KYVWEGAIPLQIHLH+S+V + P PPPAL+LAPRIGYLPLL+ LIKPYF SLP
Sbjct: 1 MAKEAVKYVWEGAIPLQIHLHKSDVASHPAPPPALVLAPRIGYLPLLIPLIKPYFKDSLP 60
Query: 107 PGVDTIWFEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVK 166
PG D+IWF+YKG PLKWY PTGVLFDLLCAEPERPWNLT+HFRGYP ++LIPCEGEDSVK
Sbjct: 61 PGEDSIWFDYKGFPLKWYIPTGVLFDLLCAEPERPWNLTIHFRGYPCNILIPCEGEDSVK 120
Query: 167 WSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDDY 226
W+F+NSLKEA YIINGNCKNVMNMSQSDQ +LW SVMNG+L+AY R+S KLK+ TVED++
Sbjct: 121 WNFVNSLKEAQYIINGNCKNVMNMSQSDQEDLWTSVMNGDLDAYTRLSPKLKMGTVEDEF 180
Query: 227 TVKLN-SSSKSQQGTGETDFAGQVKTGRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFI 285
+ K + SS +SQQ ET+ AGQVKT RIPVRLYV S+++DF++LED P+ID WD IS++
Sbjct: 181 SRKTSLSSPQSQQVVPETEVAGQVKTARIPVRLYVRSLNKDFENLEDVPEIDTWDDISYL 240
Query: 286 NRPVEVRTEEGKCFTLRDAIKTLLPEYFTDKPLFNDESPKLEDEEMNLSSEDAGSNKNTE 345
NRPVE EEGKCFTLRDAIK+LLPE+ D+ + E ++D E S + G
Sbjct: 241 NRPVEFLKEEGKCFTLRDAIKSLLPEFMGDRAQTSGEERSIDDTEEADGSREMG------ 294
Query: 346 VEEILYEHVTRNAEIKLVRIQGIEPKLEIPFSWV 379
EIKLVRIQGIE KLEIPFSWV
Sbjct: 295 -------------EIKLVRIQGIEMKLEIPFSWV 315
>sp|A2X052|ATG5_ORYSI Autophagy protein 5 OS=Oryza sativa subsp. indica GN=ATG5 PE=3 SV=2
Length = 380
Score = 361 bits (926), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 247/345 (71%), Gaps = 21/345 (6%)
Query: 50 EARKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLPPGV 109
EA + VW GA+PLQ+HLH+++VTTLPPPPP L L PRIGYLPLLV +IK +F S+LPPG+
Sbjct: 14 EAARRVWGGAVPLQVHLHDADVTTLPPPPPFLTLGPRIGYLPLLVPIIKAHFSSTLPPGI 73
Query: 110 DTIWFEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSF 169
DT+WFEYKGLPLKWY P GVL+DLLCA+PERPWNLTVHFRGYP +L PC+GEDSVKWS+
Sbjct: 74 DTVWFEYKGLPLKWYIPIGVLYDLLCADPERPWNLTVHFRGYPSEILTPCDGEDSVKWSY 133
Query: 170 INSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDDYTVK 229
+NSLKEAA+II GN KNVMNMSQ+DQ LW+SVM GNL+ Y+ +S++LKL E+D V+
Sbjct: 134 MNSLKEAAFIITGNSKNVMNMSQADQGALWQSVMKGNLDGYMNISTRLKLGPFEEDCLVR 193
Query: 230 LNSSSKSQQGTGETDFAGQVKTGRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFINRPV 289
SS + QQG+ E + G K R+PVRLYV SV ED DLEDA + W+ IS+INRP
Sbjct: 194 -TSSVEGQQGSDEPESPGSGKPCRVPVRLYVRSVQEDLYDLEDALPVGDWESISYINRPF 252
Query: 290 EVRTEEGKCF-TLRDAIKTLLPEYFTDKPLFNDESPKLEDEEMNLSSEDAGSNKNTEVEE 348
EVR EEG+ + TL A+KTLLPE+F+ K S +D E + D+ N +++V
Sbjct: 253 EVRREEGRSYITLEHALKTLLPEFFSSK-----ASRIPDDSETAPQAPDSAPNDDSDVTP 307
Query: 349 ILYEHVTRNAE--------------IKLVRIQGIEPKLEIPFSWV 379
E + +A +KLVR+QGIE ++IPF WV
Sbjct: 308 RSCEKLESSASSSPQEANVANKGKIVKLVRVQGIEVDMDIPFLWV 352
>sp|Q6ZGL4|ATG5_ORYSJ Autophagy protein 5 OS=Oryza sativa subsp. japonica GN=ATG5 PE=2
SV=1
Length = 380
Score = 357 bits (917), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 246/345 (71%), Gaps = 21/345 (6%)
Query: 50 EARKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLPPGV 109
EA + VW GA+PLQ+HLH+++VTTLPPPPP L L PRIGYLPLLV +IK +F S+LPPG+
Sbjct: 14 EAARRVWGGAVPLQVHLHDADVTTLPPPPPFLTLGPRIGYLPLLVPIIKAHFSSTLPPGI 73
Query: 110 DTIWFEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSF 169
DT+WFEYKGLPLKWY P GVL+DLLCA+PERPWNLTVHFRGYP +L C+GEDSVKWS+
Sbjct: 74 DTVWFEYKGLPLKWYIPIGVLYDLLCADPERPWNLTVHFRGYPSEILTLCDGEDSVKWSY 133
Query: 170 INSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDDYTVK 229
+NSLKEAA+II GN KNVMNMSQ+DQ LW+SVM GNL+ Y+ +S++LKL E+D V+
Sbjct: 134 MNSLKEAAFIITGNSKNVMNMSQADQGALWQSVMKGNLDGYMNISTRLKLGPFEEDCLVR 193
Query: 230 LNSSSKSQQGTGETDFAGQVKTGRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFINRPV 289
SS + QQG+ E + G K R+PVRLYV SV ED DLEDA + W+ IS+INRP
Sbjct: 194 -TSSVEGQQGSDEPESPGSGKPCRVPVRLYVRSVQEDLYDLEDALPVGDWESISYINRPF 252
Query: 290 EVRTEEGKCF-TLRDAIKTLLPEYFTDKPLFNDESPKLEDEEMNLSSEDAGSNKNTEVEE 348
EVR EEG+ + TL A+KTLLPE+F+ K S +D E + D+ N +++V
Sbjct: 253 EVRREEGRSYITLEHALKTLLPEFFSSK-----ASRIPDDSETAPQAPDSAPNDDSDVTP 307
Query: 349 ILYEHVTRNAE--------------IKLVRIQGIEPKLEIPFSWV 379
E + +A +KLVR+QGIE ++IPF WV
Sbjct: 308 RSCEKLESSASSSPQEANVANKGKIVKLVRVQGIEVDMDIPFLWV 352
>sp|Q5B2Q6|ATG5_EMENI Autophagy protein 5 OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=atg5 PE=3 SV=2
Length = 334
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 105/188 (55%), Gaps = 25/188 (13%)
Query: 52 RKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLPPGVDT 111
+K VWEG IPL+I L SE T P LI PRI YLP L+ +K +F SSL +D
Sbjct: 10 QKSVWEGQIPLKIVLAPSESRTYDQTDPYLISYPRISYLPSLLPRLKAFFSSSL---IDP 66
Query: 112 I-------WFEYKGLPLKWYTPTGVLFDLLC-AEP-------------ERPWNLTVHFRG 150
WF ++G+PLKW+ P G+L+DL AEP + PW L VHF
Sbjct: 67 TASQPHDGWFSFEGVPLKWHYPVGLLYDLYAGAEPATKSSETEALDDEQLPWRLVVHFGD 126
Query: 151 YPVHVLIPCEGEDSVKW-SFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEA 209
+P L+ + + +V +FINS+KEA ++ NG K +M +S+ D LW++V + +L +
Sbjct: 127 WPDAELVRLDAQGTVMHDAFINSVKEADFVRNGTAKGIMTLSKDDSSGLWKAVQDVDLPS 186
Query: 210 YLRVSSKL 217
+ R+ + L
Sbjct: 187 FQRIMNIL 194
>sp|A1DMA1|ATG5_NEOFI Autophagy protein 5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / FGSC A1164 / NRRL 181) GN=atg5 PE=3 SV=1
Length = 326
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 104/190 (54%), Gaps = 24/190 (12%)
Query: 52 RKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSL-PPGVD 110
++ VW+G +PLQI L SE T P LI PRI YLP L+ ++ +F SSL P
Sbjct: 17 QRAVWDGKLPLQITLASSESRTYDQTDPYLIACPRISYLPSLLPRLRAFFSSSLIEPNSQ 76
Query: 111 T--IWFEYKGLPLKWYTPTGVLFDLLC-AEPER-------------------PWNLTVHF 148
WF ++G+PLKW+ P G+L+DL A+P PW LTVHF
Sbjct: 77 PHEGWFSFEGVPLKWHLPVGLLYDLYAGADPASKGTRIDETDHPSSSLSDTLPWRLTVHF 136
Query: 149 RGYPVHVLIPCEGEDSVKW-SFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNL 207
+P L+ + + V +FINS+KEA ++ NG K +M +S+ D LW++V + +L
Sbjct: 137 SDWPDEELVRLDADGMVMHDAFINSVKEADFLRNGTAKGIMTLSKEDSAGLWQAVQDVDL 196
Query: 208 EAYLRVSSKL 217
++ R+S+ L
Sbjct: 197 PSFQRISNIL 206
>sp|Q2UBM1|ATG5_ASPOR Autophagy protein 5 OS=Aspergillus oryzae (strain ATCC 42149 / RIB
40) GN=atg5 PE=3 SV=1
Length = 322
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 101/191 (52%), Gaps = 25/191 (13%)
Query: 52 RKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSL---PPG 108
+K VW+G +PLQI L SE P LI PRI YLP L+ ++ +F SSL
Sbjct: 11 QKAVWDGRLPLQIRLAPSESRIYDQTDPYLISYPRISYLPSLLPRLRAFFASSLIDPSSN 70
Query: 109 VDTIWFEYKGLPLKWYTPTGVLFDLLC-AEPER--------------------PWNLTVH 147
WF ++G+PLKW+ P G+L+DL A+P PW L VH
Sbjct: 71 AHDGWFSFEGVPLKWHLPIGLLYDLYAGADPASKGTAESEDAGWDIDDQDNPLPWRLVVH 130
Query: 148 FRGYPVHVLIPCEGEDSV-KWSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGN 206
F +P L+ + E V +FINS+KEA ++ NG K +M++S+ D LW+SV N
Sbjct: 131 FSDWPDEELVRLDAEGMVMNDAFINSVKEADFLRNGTAKGIMSLSKEDSSGLWKSVQNVE 190
Query: 207 LEAYLRVSSKL 217
L ++ R+S+ L
Sbjct: 191 LSSFQRISNIL 201
>sp|Q9H1Y0|ATG5_HUMAN Autophagy protein 5 OS=Homo sapiens GN=ATG5 PE=1 SV=2
Length = 275
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 135/326 (41%), Gaps = 83/326 (25%)
Query: 55 VWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T P L+L PR+ YL L+ +K +F + + IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLL-PRVSYLTLVTDKVKKHFQKVMRQEDISEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D+++ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAIEAHFMSCM 129
Query: 174 KEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDDYTVKLNSS 233
KEA + + + M + D +LW + N + + ++ KL +Y + N
Sbjct: 130 KEAD-ALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLM------EYPAEENGF 182
Query: 234 SKSQQGTGETDFAGQVKTGRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFINRPVEVRT 293
IP R+Y + F I + RPV
Sbjct: 183 R------------------YIPFRIYQTTTERPF--------------IQKLFRPVAA-- 208
Query: 294 EEGKCFTLRDAIKTLLPEYFTDKPLFNDESPKLEDEEMNLSSEDAGSNKNTEVEEILYEH 353
+G+ TL D +K + P + ED G KN
Sbjct: 209 -DGQLHTLGDLLKEVCPS--------------------AIDPED-GEKKNQ--------- 237
Query: 354 VTRNAEIKLVRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 238 ---------VMIHGIEPMLETPLQWL 254
>sp|Q99J83|ATG5_MOUSE Autophagy protein 5 OS=Mus musculus GN=Atg5 PE=1 SV=1
Length = 275
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
Query: 55 VWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T P L+L PR+ YL L+ +K +F + V IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLL-PRVSYLTLVTDKVKKHFQKVMRQEDVSEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D+V+ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAVEAHFMSCM 129
Query: 174 KEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKL 217
KEA + + + M + D +LW + N + + ++ KL
Sbjct: 130 KEAD-ALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKL 172
>sp|A1CE93|ATG5_ASPCL Autophagy protein 5 OS=Aspergillus clavatus (strain ATCC 1007 / CBS
513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=atg5 PE=3 SV=2
Length = 321
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 24/190 (12%)
Query: 52 RKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSL---PPG 108
+K VW+G +PLQI L SE T P LI PRI YLP L+ ++ +F SSL
Sbjct: 11 QKTVWDGKLPLQITLASSESRTFDQTDPYLISCPRISYLPSLLPRLRSFFASSLIEPKSQ 70
Query: 109 VDTIWFEYKGLPLKWYTPTGVLFDLLC-AEPER-------------------PWNLTVHF 148
WF ++G+PLKW+ P G+L+DL A+P PW LT+HF
Sbjct: 71 PHEGWFSFEGVPLKWHLPIGLLYDLYAGADPASKGSRPDESEQIISSVGDTLPWRLTLHF 130
Query: 149 RGYPVHVLIPCEGEDSVKW-SFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNL 207
+P L+ + + V +FINS+KEA ++ NG K +M++S+ D LW +V + +L
Sbjct: 131 SDWPDEELVRLDADGMVMHDAFINSVKEADFLRNGTAKGIMSLSKEDSSGLWEAVQDVDL 190
Query: 208 EAYLRVSSKL 217
++ R+S+ L
Sbjct: 191 PSFQRISNIL 200
>sp|Q4WNA5|ATG5_ASPFU Autophagy protein 5 OS=Neosartorya fumigata (strain ATCC MYA-4609 /
Af293 / CBS 101355 / FGSC A1100) GN=atg5 PE=3 SV=1
Length = 326
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 24/202 (11%)
Query: 40 SLNRNRNMHMEARKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKP 99
S+ N+ ++ VW+G +PLQI L SE T P LI PRI YLP L+ ++
Sbjct: 5 SMMENQVSLSSIQRAVWDGKLPLQITLASSESRTYDQTDPYLIACPRISYLPSLLPRLRA 64
Query: 100 YFGSSL-PPGVDTI--WFEYKGLPLKWYTPTGVLFDLLC-AEPER--------------- 140
+F SL P WF ++G+PLKW+ P G+L+DL A+P
Sbjct: 65 FFSPSLIEPNSQPHEGWFSFEGVPLKWHLPVGLLYDLYAGADPASKGTRVDETDHPTSSL 124
Query: 141 ----PWNLTVHFRGYPVHVLIPCEGEDSVKW-SFINSLKEAAYIINGNCKNVMNMSQSDQ 195
PW LTVHF +P L+ + + V +FINS+KEA ++ NG K +M +S+ D
Sbjct: 125 NDTLPWRLTVHFSDWPDEELVRLDADGMVMHDAFINSVKEADFLRNGTAKGIMTLSKEDS 184
Query: 196 VELWRSVMNGNLEAYLRVSSKL 217
LW++V + +L ++ R+S+ L
Sbjct: 185 AGLWQAVQDVDLLSFQRISNIL 206
>sp|Q3MQ24|ATG5_BOVIN Autophagy protein 5 OS=Bos taurus GN=ATG5 PE=2 SV=2
Length = 275
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 136/326 (41%), Gaps = 83/326 (25%)
Query: 55 VWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T P L+L PR+ YL L+ +K +F + + IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLL-PRVSYLTLVTDKVKKHFQKVMRQEDISEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D ++ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDVIEAHFMSCV 129
Query: 174 KEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDDYTVKLNSS 233
KEA + + + M + D +LW + N + + ++ KL +Y + N
Sbjct: 130 KEAD-ALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLM------EYPAEENGF 182
Query: 234 SKSQQGTGETDFAGQVKTGRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFINRPVEVRT 293
IP R+Y + F I + RPV +
Sbjct: 183 R------------------YIPFRIYQTTTERPF--------------IQKLFRPV---S 207
Query: 294 EEGKCFTLRDAIKTLLPEYFTDKPLFNDESPKLEDEEMNLSSEDAGSNKNTEVEEILYEH 353
+G+ TL D +K + P ++ ED G KN
Sbjct: 208 TDGQLHTLGDLLKEVCPS--------------------AVAPED-GEKKNQ--------- 237
Query: 354 VTRNAEIKLVRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 238 ---------VMIHGIEPMLETPLQWL 254
>sp|Q3MQ06|ATG5_RAT Autophagy protein 5 OS=Rattus norvegicus GN=Atg5 PE=2 SV=1
Length = 275
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
Query: 55 VWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T P L+L PR+ YL L+ +K +F + V IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLL-PRVSYLTLVTDKVKKHFQKVMRQEDVSEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D+V+ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPCKDAVEAHFMSCV 129
Query: 174 KEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKL 217
KEA + + + M + D +LW + N + + ++ KL
Sbjct: 130 KEAD-ALKHKSQVINEMQRKDHKQLWMGLQNDRFDQFWTINRKL 172
>sp|Q5R792|ATG5_PONAB Autophagy protein 5 OS=Pongo abelii GN=ATG5 PE=2 SV=1
Length = 275
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 134/326 (41%), Gaps = 83/326 (25%)
Query: 55 VWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L + E+T P L+L PR+ YL L+ +K +F + + IW
Sbjct: 11 VWFGRIPTCFTLCQDEITEREAEPYYLLL-PRVSYLTLVTDKVKKHFQKVMRQEDISEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D+++ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAIEAHFMSCM 129
Query: 174 KEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDDYTVKLNSS 233
KEA + + + M + D +LW + N + + ++ KL +Y + N
Sbjct: 130 KEAD-ALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLM------EYPAEENGF 182
Query: 234 SKSQQGTGETDFAGQVKTGRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFINRPVEVRT 293
IP R+Y + F I + RPV
Sbjct: 183 R------------------YIPFRIYQTTTERPF--------------IQKLFRPV---A 207
Query: 294 EEGKCFTLRDAIKTLLPEYFTDKPLFNDESPKLEDEEMNLSSEDAGSNKNTEVEEILYEH 353
+G+ TL D +K + P + ED G KN
Sbjct: 208 ADGQLHTLGDLLKEVCPS--------------------AVDPED-GEKKNQ--------- 237
Query: 354 VTRNAEIKLVRIQGIEPKLEIPFSWV 379
V I GIEP LE P W+
Sbjct: 238 ---------VMIHGIEPMLETPLQWL 254
>sp|Q3MQ04|ATG5_PIG Autophagy protein 5 OS=Sus scrofa GN=ATG5 PE=2 SV=1
Length = 275
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
Query: 55 VWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSL-PPGVDTIW 113
VW G IP L++ E+T P L+L PR+ YL L+ +K +F + + IW
Sbjct: 11 VWFGRIPTCFTLYQDEITEREAEPYYLLL-PRVSYLTLVTDKVKKHFQKVMRQEDISEIW 69
Query: 114 FEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFINSL 173
FEY+G PLKW+ P G+LFDLL + PWN+TVHF+ +P L+ C +D ++ F++ +
Sbjct: 70 FEYEGTPLKWHYPIGLLFDLLASISALPWNITVHFKSFPEKDLLHCPSKDVIEAHFMSCV 129
Query: 174 KEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKL 217
KEA + + + +M + D +LW + N + + ++ KL
Sbjct: 130 KEAD-ALKHKSRVISDMQRKDHKQLWMGLQNDRFDQFWTINRKL 172
>sp|Q0UXN8|ATG5_PHANO Autophagy protein 5 OS=Phaeosphaeria nodorum (strain SN15 / ATCC
MYA-4574 / FGSC 10173) GN=ATG5 PE=3 SV=1
Length = 311
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 26/200 (13%)
Query: 44 NRNMHMEARKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGS 103
+R + R+ VW G++PL+I LH+ + T LI PR+ YL LL+ + +F
Sbjct: 3 SREVTSRLREKVWNGSVPLEIRLHKGDCRTYDDSDAYLIQFPRLSYLALLIHKLHAFFAP 62
Query: 104 SLP-PGV--DTIWFEYKGLPLKWYTPTGVLFDLLC-AEPER------------------- 140
SL P + +WF Y+G+PLKW+ P G+L+DL AEP
Sbjct: 63 SLIYPDIHPSDLWFSYEGVPLKWHYPLGLLYDLYSGAEPYHPSDSPPPSPTTPSKQDSKQ 122
Query: 141 --PWNLTVHFRGYPVHVLIPCEGED-SVKWSFINSLKEAAYIINGNCKNVMNMSQSDQVE 197
PW LT+H YP LIP + + + FI+S+KEA Y+ G K VM +SQ+D +
Sbjct: 123 PLPWRLTLHTSAYPTTQLIPLDNNNLQIHDLFIHSVKEADYLRTGTGKTVMFLSQADSTQ 182
Query: 198 LWRSVMNGNLEAYLRVSSKL 217
LW +V+ + + ++ KL
Sbjct: 183 LWDAVVKHDFALFNPINQKL 202
>sp|Q0CRF3|ATG5_ASPTN Autophagy protein 5 OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=atg5 PE=3 SV=2
Length = 315
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 100/189 (52%), Gaps = 21/189 (11%)
Query: 50 EARKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLPPGV 109
+ +K VW+G +PLQI L SE + P LI PRI YLP L+ + +F SSL
Sbjct: 9 DIQKAVWDGRLPLQITLSPSESRSYDKTDPYLISYPRISYLPSLLPRLHAFFSSSLIEPT 68
Query: 110 DTI---WFEYKGLPLKWYTPTGVLFDLLC-----------------AEPERPWNLTVHFR 149
WF ++G+PLKW+ P G+L+DL AE PW L V F
Sbjct: 69 SKPHDGWFSFEGVPLKWHLPVGLLYDLYAGADPASKGSGPASDDETAEFPLPWRLVVQFS 128
Query: 150 GYPVHVLIPCEGEDSVKW-SFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLE 208
+P L+ + + V +FINS+KEA ++ NG K +M +S+ D LW+SV + +L
Sbjct: 129 DWPDEELVRLDADGMVMHDAFINSVKEADFMRNGTAKGIMTLSKEDSSGLWKSVQDVDLP 188
Query: 209 AYLRVSSKL 217
++ R+S+ L
Sbjct: 189 SFQRISNIL 197
>sp|A7KAL6|ATG5_PENCW Autophagy protein 5 OS=Penicillium chrysogenum (strain ATCC 28089 /
DSM 1075 / Wisconsin 54-1255) GN=atg5 PE=3 SV=1
Length = 317
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 102/194 (52%), Gaps = 20/194 (10%)
Query: 44 NRNMHMEARKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGS 103
NR +K VW+G +PL+I L SE T P LI PRI YLP L+ ++ +F +
Sbjct: 3 NRVSLGSIQKAVWDGRLPLEIVLASSESRTFDKTDPYLISYPRISYLPSLLPKLRAFFSN 62
Query: 104 SL-PPGVDT--IWFEYKGLPLKWYTPTGVLFDLLCA-EPER----------------PWN 143
L P + WFE++G+PLKW+ P G+LFDL +P PW
Sbjct: 63 FLIDPNSQSHDGWFEFEGVPLKWHYPVGLLFDLYAGVDPASKTAARDNESPGDGSSLPWR 122
Query: 144 LTVHFRGYPVHVLIPCEGEDSVKWSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVM 203
L VHF +P ++ + +FINS+KEA ++ NG K +M++S+ D LW +V
Sbjct: 123 LIVHFSDWPPDLVRLDAYGMVMNDAFINSVKEADFLRNGTAKGIMSLSKEDSSGLWNAVQ 182
Query: 204 NGNLEAYLRVSSKL 217
+L ++ R+S+ L
Sbjct: 183 EVDLLSFQRISNIL 196
>sp|A6RE26|ATG5_AJECN Autophagy protein 5 OS=Ajellomyces capsulata (strain NAm1 / WU24)
GN=ATG5 PE=3 SV=1
Length = 333
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 44/207 (21%)
Query: 52 RKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLPPGVD- 110
++ VWEG IPL+I L +E T P LI PR+ YLP L+ ++ +F +SL +D
Sbjct: 12 QRRVWEGRIPLEITLSPAECRTYDKADPYLICYPRVSYLPFLLPRLRAFFATSL---IDI 68
Query: 111 -----TIWFEYKGLPLKWYTPTGVLFDLLCA------------------------EPER- 140
WF ++G+PLKW+ P G+L+DL +PE
Sbjct: 69 EAQDYQGWFSFEGVPLKWHYPLGLLYDLYSGADPVTSKSTVGEHLSHTTSPRQPNDPEPH 128
Query: 141 ---------PWNLTVHFRGYPVHVLIPCEGEDSV-KWSFINSLKEAAYIINGNCKNVMNM 190
PW L VHF +P L+ + + V +FINS+KEA ++ NG K +M +
Sbjct: 129 NVHEPGDPIPWQLQVHFSDWPDQELVRLDADGRVIHDAFINSVKEADFVRNGTAKRIMTL 188
Query: 191 SQSDQVELWRSVMNGNLEAYLRVSSKL 217
S+ D LW++V + + R+S+ L
Sbjct: 189 SKEDSSGLWQAVQEHDFTNFQRISNIL 215
>sp|Q1DP17|ATG5_COCIM Autophagy protein 5 OS=Coccidioides immitis (strain RS) GN=ATG5
PE=3 SV=1
Length = 351
Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 99/214 (46%), Gaps = 52/214 (24%)
Query: 52 RKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSL-PPGVD 110
++ VW+G IPLQI L SE P +I PR+ YLP ++ + +F SSL P V
Sbjct: 12 QQRVWQGRIPLQIVLSPSECRIYDQSDPYIISIPRLSYLPFILPRLFSFFSSSLIDPDVQ 71
Query: 111 TI--WFEYKGLPLKWYTPTGVLFDLLC-AEP-----------ER---------------- 140
WF ++G+PLKW+ P G+L+DL AEP ER
Sbjct: 72 AHDGWFSFEGVPLKWHYPVGLLYDLYAGAEPITSKSLSSPGSEREHYVRGGTRENISESG 131
Query: 141 --------------------PWNLTVHFRGYPVHVLIPCEGEDSVKW-SFINSLKEAAYI 179
PW L VHF +P LI + E + +FINS+KEA +
Sbjct: 132 AEGEKDDNHGHDHEFKRDALPWRLMVHFHDWPEQDLIRLDPEGKILHDAFINSVKEADCL 191
Query: 180 INGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRV 213
NG K +M +S+ D LW+SV NL AY R+
Sbjct: 192 RNGTAKRIMALSKEDSSGLWKSVEEHNLPAYHRI 225
>sp|A5DCZ3|ATG5_PICGU Autophagy protein 5 OS=Meyerozyma guilliermondii (strain ATCC 6260
/ CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL
Y-324) GN=ATG5 PE=3 SV=2
Length = 258
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 23/180 (12%)
Query: 47 MHMEARKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLP 106
+ + + ++W GAI + I +E + L+ A R YLPL I YF S P
Sbjct: 3 LEQDIKLHIWNGAINIVIVYNEQQY---------LVRAHRNSYLPLYYADISAYFELSQP 53
Query: 107 PGVDTIWFEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCE---GED 163
+W EY+G+PLKW P GVL DLL + W + + P H +IP ++
Sbjct: 54 -----LWLEYQGVPLKWNLPVGVLSDLLRTPSKEAWEVQLRTDNLPSHEIIPYHYHVEDN 108
Query: 164 SVKWS------FINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKL 217
S+ ++ IN +K++ Y +NGN K +M +S+S+ LW S+ NL Y +++SK+
Sbjct: 109 SIDYTRALREVVINHIKQSCYTLNGNAKKIMGLSESESKRLWISIATHNLPEYHQITSKI 168
>sp|Q9W3R7|ATG5_DROME Autophagy protein 5 OS=Drosophila melanogaster GN=Atg5 PE=2 SV=2
Length = 269
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 19/225 (8%)
Query: 50 EARKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGS--SLPP 107
E + +WEG I + E+ + P P L+++ R+ YLPL+ ++ YF S
Sbjct: 6 EVLRMIWEGQIGICFQADRDEIVGIKPEPFYLMIS-RLSYLPLVTDKVRKYFSRYISAEH 64
Query: 108 GVDTIWFEYKGLPLKWYTPTGVLFDLLCAEPER-PWNLTVHFRGYPVHVLIPCEGEDSVK 166
+WF++ G PL+ + P GVL+DLL E + PW LT+HF +P +L+ ++ ++
Sbjct: 65 QDGAVWFDFNGTPLRLHYPIGVLYDLLHPEEDSTPWCLTIHFSKFPEDMLVKLNSKELLE 124
Query: 167 WSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKLK-------- 218
+++ LKEA ++ + M + D +LW ++N + + V+ +L
Sbjct: 125 SHYMSCLKEAD-VLKHRGLVISAMQKKDHNQLWLGLVNEKFDQFWAVNRRLMEPYGDLES 183
Query: 219 ------LITVEDDYTVKLNSSSKSQQGTGETDFAGQVKTGRIPVR 257
I +DD+T S G + A + PVR
Sbjct: 184 FKNIPLRIYTDDDFTYTQKLISPISVGGQKKSLADLMAELSTPVR 228
>sp|Q6BVI8|ATG5_DEBHA Autophagy protein 5 OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ATG5 PE=3
SV=2
Length = 292
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 126/291 (43%), Gaps = 75/291 (25%)
Query: 43 RNRNMHMEARKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFG 102
++ N +E + +W G+I ++I + + + P LI R Y P+ + YF
Sbjct: 2 QSSNELIEIKDKLWNGSINVRILMGDDNIKD---PKEFLITVYRNSYFPIYFPSVITYFQ 58
Query: 103 SS------LPPGVDTIWFEYKGLPLKWYTPTGVLFDLLCAEP------ERPWNLTVHFRG 150
+P +W EY+ +P+KW P GVL+DLL + W LT+ F
Sbjct: 59 KYNEKIKYMP-----VWLEYETVPIKWNLPIGVLYDLLHLSSIVQNREDSSWTLTLRFSD 113
Query: 151 -YPVHVLIPCEGED---------SVKWSFINSLKEAAYIINGNCKNVMNMSQSDQVELWR 200
YP +IP D S+K +N LK++ ++INGN K +MN+S+ D ELW
Sbjct: 114 DYPTDQVIPFTYTDVDNSVNYNKSLKEVVVNQLKQSCFVINGNSKPIMNLSEKDSDELWN 173
Query: 201 SVMNGNLEAYLRVSSKLKLITVEDDYTVKLNSSSKSQQGTGETDFAGQVKTGRIPVRLYV 260
S+ NL+++ +++ K+ I Q K ++PV++Y+
Sbjct: 174 SIRIHNLKSFNQINKKIIPI---------------------------QKKFQKLPVKIYI 206
Query: 261 WSVSEDFDDLEDAPDIDCWDKISFINRPVEVRTEEGKCFTLRDAIKTLLPE 311
+ + I+ P+ ++ G+ LRD ++ LP+
Sbjct: 207 PGSA------------------TIIHAPIYPYSDSGEAVLLRDILEEYLPD 239
>sp|A3LR68|ATG5_PICST Autophagy protein 5 OS=Scheffersomyces stipitis (strain ATCC 58785
/ CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=ATG5 PE=3
SV=2
Length = 282
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 24/187 (12%)
Query: 49 MEARKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLPPG 108
+E + +W G I L++ L + L R Y+ L + I YF S+ G
Sbjct: 7 IEIKAKLWNGHINLRVVLAYKDQKV-----EYLCTIYRNSYITLKLPAIVEYF-SAFVQG 60
Query: 109 VDT--IWFEYKGLPLKWYTPTGVLFDLLCA-------EPERPWNLTVHFRGYPVHVLIP- 158
+ + +WFEY+G+P+KW P G+L+D L E W + + + YP +IP
Sbjct: 61 LSSKQLWFEYEGVPIKWNLPVGLLYDYLHLPSLLGNFESSSSWTVYLRYDDYPSDYIIPF 120
Query: 159 --------CEGEDSVKWSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAY 210
+ + S+K +N LK++ +++NGN K +M++S+++ ++LW S+++ NL AY
Sbjct: 121 IYKKDDGTVDFDRSLKEVIVNQLKQSCFVLNGNSKPIMSLSEANSIQLWVSIVDHNLSAY 180
Query: 211 LRVSSKL 217
++ K+
Sbjct: 181 TSINKKI 187
>sp|A7KAI4|ATG5_PICAN Autophagy protein 5 OS=Pichia angusta GN=ATG5 PE=3 SV=1
Length = 277
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 10/171 (5%)
Query: 55 VWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYL----PLLVGLIKPYFGSSLPPGVD 110
VW G + +Q HL + P + R YL P ++ KP+ +
Sbjct: 10 VWGGVLYMQFHLDRALSNQ--ECPSFYVAVHRNSYLHNSLPAILQFFKPFLKDARLAQSQ 67
Query: 111 TIWFEYKGLPLKWYTPTGVLFDLLCAEPE---RPWNLTVHFRGYPVHVLIPCEGEDS-VK 166
WFE++ +PLKW P G+L+DL+ + + + W +T+ + YP+ +IP + S +K
Sbjct: 68 KWWFEFEKVPLKWNFPVGLLYDLVTTDAQVEKQMWEITLKYYDYPIEYVIPIDQNPSFLK 127
Query: 167 WSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKL 217
+ N LKEA +I+NG+ K VMNMS++D + + + ++ + + + KL
Sbjct: 128 DHWTNQLKEACFILNGSSKLVMNMSRTDSDDFYHAAIHKDSTQFESMFRKL 178
>sp|Q54GT9|ATG5_DICDI Autophagy protein 5 OS=Dictyostelium discoideum GN=atg5 PE=3 SV=1
Length = 398
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%)
Query: 50 EARKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLPPGV 109
+ ++ +WEG IP+ L ++T+ P P ++APR Y PL+ L+K YF SS +
Sbjct: 7 DIKRSIWEGKIPIVFTLSPDDLTSHLSPSPYTLMAPRNSYFPLITSLVKDYFSSSTLVLL 66
Query: 110 DTIWFEYKGLPLKWYTPTGVLFDLLCA 136
D +W EY+G+PLKW+ P GVL+D +
Sbjct: 67 DEMWLEYRGIPLKWHLPIGVLYDTIVG 93
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 139 ERP-WNLTVHFRGYPVHVLIPCEGEDSVKWSFINSLKEAAYIINGNCKNVMNMSQSDQVE 197
E+P WN+ VHF+ YP +L+ C +SV+ + N LKEA +I G+ + N++ + +
Sbjct: 151 EQPYWNIVVHFQSYPDRILLRCPNIESVRTYYKNVLKEANFIKQGDITKINNLNINQSND 210
Query: 198 LWRSVMNGNLEAYLRVSSKL 217
LW + + + + + V+ KL
Sbjct: 211 LWDGLKSHDYDKFWSVNKKL 230
>sp|A7EJG6|ATG5_SCLS1 Autophagy protein 5 OS=Sclerotinia sclerotiorum (strain ATCC 18683
/ 1980 / Ss-1) GN=atg5 PE=3 SV=1
Length = 266
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 27/166 (16%)
Query: 52 RKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLPPGVDT 111
+ +W AIPL I S + P LI PR+ YL LL + +FG ++
Sbjct: 2 QSLIWASAIPLYITHSSSTI-------PYLINVPRVSYLALLFPRLTSFFGENVSS---- 50
Query: 112 IWFEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGEDSVKWSFIN 171
F Y+G+ LK P G+L DL +PE PW + P+ + +FIN
Sbjct: 51 --FSYEGILLK-NLPVGLLCDLY--QPELPWR--IELGDGPLF---------DIHDTFIN 94
Query: 172 SLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKL 217
S+KEA ++ NGN K +M+MS+ +LW SV + + Y ++S+ L
Sbjct: 95 SVKEADFMRNGNAKGIMSMSKEHSTQLWNSVQDNDFSTYHKISTIL 140
>sp|Q525E4|ATG5_MAGO7 Autophagy protein 5 OS=Magnaporthe oryzae (strain 70-15 / ATCC
MYA-4617 / FGSC 8958) GN=ATG5 PE=2 SV=1
Length = 314
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 25/166 (15%)
Query: 53 KYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLPPGVDTI 112
+ +W +IPL I H S T P + PR+ YL LL+ I+ + S+P
Sbjct: 64 RTLWRLSIPLYIT-HPSLPNT-----PFITSLPRVSYLSLLLPRIRAFLPPSIPAPTS-- 115
Query: 113 WFEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVLIPCEGED-SVKWSFIN 171
F ++G+ L+ P G+L DL +P PW LTV +G+D V +F+N
Sbjct: 116 -FHHEGIALR-ALPLGLLVDLY--QPTLPWRLTVD------------QGDDWHVGDTFLN 159
Query: 172 SLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKL 217
+KEA ++ NG+ K +M MS++D LW +V + + A+ R++++L
Sbjct: 160 GVKEADFVRNGHAKQIMGMSKADTTALWNAVRDADYPAWARINARL 205
>sp|Q6CKE2|ATG5_KLULA Autophagy protein 5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS
2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=ATG5 PE=3 SV=1
Length = 271
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 18/186 (9%)
Query: 50 EARKYVWEGAIPLQIHLHESEVTTLPPPPPAL--ILAPRIGYLPLLVGLIKPYFGSSLPP 107
E R+ VW G++ ++I L +S V P I+ R +L L + I G+++
Sbjct: 3 ELRERVWHGSLNVEIMLSDSIVVPNTPLSEKCYHIVVLRESFLALYLPAIVRKLGNNVIV 62
Query: 108 GVDT----IWFEYKGLPLKWYTPTGVLFDLLCAEPE-----------RPWNLTV-HFRGY 151
+ WFEY G+P+ W P GVLFD LC + W L + H Y
Sbjct: 63 TYENPYKQWWFEYDGVPVPWEYPCGVLFDFLCNSSTTSTGKEDDQRLQMWKLKLCHGNKY 122
Query: 152 PVHVLIPCEGEDSVKWSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYL 211
P +L +G VK + + K+A +I+NG+ K +M++S D W+S+++ + Y+
Sbjct: 123 PPGILPLVDGLRQVKDHWKHQWKQACFILNGSAKRIMSLSIPDFEAFWQSLISRHQPDYI 182
Query: 212 RVSSKL 217
+V KL
Sbjct: 183 KVREKL 188
>sp|O74971|ATG5_SCHPO Autophagy protein 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=atg5 PE=1 SV=1
Length = 261
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 55 VWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLPPGVDTIWF 114
+W G I ++I + + L PR Y ++ ++ S+P + W
Sbjct: 14 LWNGTISVRIDYEGNSLAYLAN-------VPRQSYFAQILPNVQRLLAPSIP--LSECWL 64
Query: 115 EYKGLPLKWYTPTGVLFDLLCA-EPERP-----WNLTVHFRGYPVHVLIPCEGEDSVKWS 168
+Y G+PLKW+ P G+LFDLL +P+ P W + + +P ++ E D+ +
Sbjct: 65 DYNGVPLKWHWPVGLLFDLLTVFDPDTPRAPVLWRIQLRSGLFPTTKILQMETMDTFRTY 124
Query: 169 FINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKL 217
F N LKE+ Y+ NG+ ++ +S+++ W +++N + + ++ K+
Sbjct: 125 FFNCLKESDYVRNGSSSGIIALSKAETDTYWNAILNHDYYDFRPIAIKI 173
>sp|Q6FJZ6|ATG5_CANGA Autophagy protein 5 OS=Candida glabrata (strain ATCC 2001 / CBS 138
/ JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ATG5 PE=3 SV=1
Length = 270
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 50 EARKYVWEGAIPLQIHLHESEVTTLPPPPPAL--ILAPRIG----YLPLLVGLIKPYFGS 103
++++ VW G+I +QI L + P L I PR Y PL++ ++ S
Sbjct: 3 DSKELVWNGSINVQIKLDSRLLVDGVPEGRRLVNIRVPRESHIAIYTPLVLERLRNVLRS 62
Query: 104 SLPPGVDTIWFEYKGLPLKWYTPTGVLFDLLCAEPE----------RPWNLT-VHFRGYP 152
+ + +W+ YK + L W P G LFD+ + W L V +P
Sbjct: 63 DIEELLPKVWYSYKDISLPWSIPFGTLFDIYNGAHKGISGSRDNYINVWKLNLVTDEKFP 122
Query: 153 VHVLIPCEGEDSVKWSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLR 212
++V+ EG+D ++ + S K+ +I+NG+ K VM++S D +E+W V + Y
Sbjct: 123 INVIPIIEGQDQLRKFMMQSWKQCCFILNGSSKRVMSLSLQDSLEVWEGVTERDYAKYSG 182
Query: 213 VSSKL 217
V ++
Sbjct: 183 VIKRI 187
>sp|Q59VY1|ATG5_CANAL Autophagy protein 5 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=ATG5 PE=3 SV=1
Length = 278
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 95/189 (50%), Gaps = 27/189 (14%)
Query: 50 EARKYVWEGAIPLQIHLH-ESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFG---SSL 105
E +K +W G+I ++I L+ E ++ L+ PR Y P + + YF +++
Sbjct: 9 EIKKKLWNGSINVKILLNIEDQIIE------YLLTIPRNSYFPTVFPQLIRYFQNFITTI 62
Query: 106 PPGVDTIWFEYKGLPLKWYTPTGVLFD------LLCAEPERPWNLTVHFR-GYPVHVLIP 158
IW E++ +PLKW P GVL+D LL W +++ + YP+ +I
Sbjct: 63 ELSKVPIWLEFEEVPLKWNLPVGVLYDYLYLPALLNDHDLGCWTISMKYEPVYPIEYIIS 122
Query: 159 ----CEGEDSVKWS------FINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLE 208
G+ + + +N LK++ +++NG K +M +S+++ +LW+S+++ NL
Sbjct: 123 FNEKLAGDGQIDYMKTMNRILMNQLKQSCFVLNGTAKPIMQLSEANTNQLWKSLISRNLG 182
Query: 209 AYLRVSSKL 217
+ ++ K+
Sbjct: 183 DFNVLNKKI 191
>sp|Q872C6|ATG5_NEUCR Autophagy protein 5 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=atg-5
PE=3 SV=2
Length = 329
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 40/192 (20%)
Query: 31 RHHRRRD-RISLNRNRNMHMEARKYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGY 89
R HR +D R S R H+ + P+Q H P P + PR Y
Sbjct: 54 RRHRSQDKRTSHIPLRATHLSTGPATFNR--PVQSH----------PKTPYICSVPRFSY 101
Query: 90 LPLLVGLIKPYFGSSLPPGVDTIWFEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFR 149
L LL+ + Y+G+ F ++ + L+ + G+L DL E PW LTV
Sbjct: 102 LALLLPRLTAYYGTP------CSSFHHEEVHLRNFA-VGLLVDLYQPS-ELPWRLTV--- 150
Query: 150 GYPVHVLIPCEGEDSVKW----SFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNG 205
D ++W +F+NS KEA +I NGN K +M +S+ LW +V +
Sbjct: 151 ------------ADGMEWDICDTFMNSAKEADFIRNGNAKRIMGLSKEHTTALWNAVQDN 198
Query: 206 NLEAYLRVSSKL 217
+ +A+ ++++ L
Sbjct: 199 DYQAFTKINTHL 210
>sp|Q12380|ATG5_YEAST Autophagy protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=ATG5 PE=1 SV=1
Length = 294
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 32/195 (16%)
Query: 50 EARKYVWEGAIPLQIHLHESEVTTLPPPPPAL--ILAPR----IGYLPLLVGLIKPYFGS 103
+ ++ +W G + + + + S + P A+ I PR + Y+PL+ IK +
Sbjct: 3 DIKQLLWNGELNVLVSIDPSFLMKGSPREIAVLRIRVPRETYLVNYMPLIWNKIKSFL-- 60
Query: 104 SLPPGVDT---IWFEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVL---- 156
S P D+ WFE+ P+ W P GVLFD L + T F VL
Sbjct: 61 SFDPLTDSEKYFWFEHNKTPIPWNYPVGVLFDCLAGKSA---TFTTSFENQVKDVLTFLR 117
Query: 157 -------------IPCEGEDSVKWSF-INSLKEAAYIINGNCKNVMNMSQSDQVELWRSV 202
IP + F + K+ +I+NG+ K +M++S ++ + W SV
Sbjct: 118 IHLVMGDSLPPTIIPIASSKTQAEKFWFHQWKQVCFILNGSSKAIMSLSVNEARKFWGSV 177
Query: 203 MNGNLEAYLRVSSKL 217
+ N + ++ +S+K+
Sbjct: 178 ITRNFQDFIEISNKI 192
>sp|A7TS83|ATG5_VANPO Autophagy protein 5 OS=Vanderwaltozyma polyspora (strain ATCC 22028
/ DSM 70294) GN=ATG5 PE=3 SV=1
Length = 297
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 37/198 (18%)
Query: 50 EARKYVWEGAIPLQIH---------LHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPY 100
E RK VW+G I +QI ++E +VT + PR YL + I
Sbjct: 3 ELRKLVWDGKINVQIAVNPQLLVKGINEKDVT-------VNLRIPRNAYLMNYIDEILND 55
Query: 101 FGSSLPPGVD------TIWFEYKGLPLKWYTPTGVLFDLL--------------CAEPER 140
L ++ WF Y+G+PL W P G L+D + C
Sbjct: 56 LRKFLITDINFEELDGMFWFAYEGIPLYWNYPFGALYDSMVGIDPSIRYDQMKQCNSMMN 115
Query: 141 PWNLTVHF-RGYPVHVLIPCEGEDSVKWSFINSLKEAAYIINGNCKNVMNMSQSDQVELW 199
W L +++ + YP ++ + + ++ +++ K+A +++NG K VM++S + W
Sbjct: 116 IWKLQLNYSKEYPSGMIPIVDRVNQIQKYWMHQWKQACFVLNGTSKQVMSLSLVHSQQFW 175
Query: 200 RSVMNGNLEAYLRVSSKL 217
+S++ + + +++ K+
Sbjct: 176 KSILMRDYITFYKIALKI 193
>sp|A6ZWA5|ATG5_YEAS7 Autophagy protein 5 OS=Saccharomyces cerevisiae (strain YJM789)
GN=ATG5 PE=3 SV=1
Length = 294
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 32/195 (16%)
Query: 50 EARKYVWEGAIPLQIHLHESEVTTLPPPPPAL--ILAPR----IGYLPLLVGLIKPYFGS 103
+ ++ +W G + + + + S + P A+ I PR + Y+P + IK +
Sbjct: 3 DIKQLLWNGELNVLVSIDPSFLMKGSPREIAVLRIRVPRETYLVNYMPFIWNKIKSFL-- 60
Query: 104 SLPPGVDT---IWFEYKGLPLKWYTPTGVLFDLLCAEPERPWNLTVHFRGYPVHVL---- 156
S P D+ WFE+ P+ W P GVLFD L + T F VL
Sbjct: 61 SFDPLTDSEKYFWFEHNKTPIPWNYPVGVLFDCLAGKSA---TFTTSFENQVKDVLTFLR 117
Query: 157 -------------IPCEGEDSVKWSF-INSLKEAAYIINGNCKNVMNMSQSDQVELWRSV 202
IP + F + K+ +I+NG+ K +M++S ++ + W SV
Sbjct: 118 IHLVMGDSLPPTIIPIASSKTQAEKFWFHQWKQVCFILNGSSKAIMSLSVNEARKFWGSV 177
Query: 203 MNGNLEAYLRVSSKL 217
+ N + ++ +S+K+
Sbjct: 178 ITRNFQDFIEISNKI 192
>sp|A5DWA7|ATG5_LODEL Autophagy protein 5 OS=Lodderomyces elongisporus (strain ATCC 11503
/ CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)
GN=ATG5 PE=3 SV=1
Length = 286
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 112 IWFEYKGLPLKWYTPTGVLFDLL-----CAEPERPWNLTVHFRG----YPVHVLIPC--E 160
IW EY+G+PL+W P GVL+D L PW L + YP + ++P
Sbjct: 80 IWLEYEGVPLRWNLPIGVLYDHLYLPAKFTNQSTPWTLDLKIASSTLPYPSNYIVPFTYS 139
Query: 161 GED-------SVKWSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRV 213
ED S+ +N LK++ Y++NG K +M ++ + L V+ NL+ Y
Sbjct: 140 AEDGSVNYTKSINEMLLNQLKQSCYVLNGTAKPIMQLNGPETELLCNLVITRNLKTYNFF 199
Query: 214 SSKL 217
++K+
Sbjct: 200 NNKI 203
>sp|Q2HGZ8|ATG5_CHAGB Autophagy protein 5 OS=Chaetomium globosum (strain ATCC 6205 / CBS
148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=ATG5 PE=3
SV=1
Length = 278
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 106/266 (39%), Gaps = 69/266 (25%)
Query: 53 KYVWEGAIPLQIHLHESEVTTLPPPPPALILAPRIGYLPLLVGLIKPYFGSSLPPGVDTI 112
+ +W +PL I H S+ T P ++ PR YL LL+ + Y+G +
Sbjct: 32 QTLWSLQVPLHI-THASKSTA-----PFIVSVPRFSYLALLLPRLTAYYG------LPCS 79
Query: 113 WFEYKGLPLKWYTPTGVLFDLLCAEPER-PWNLTVHFRGYPVHVLIPCEGEDSVKW---- 167
F ++ + L+ G+L DL +P PW L V D +W
Sbjct: 80 SFHHEEIQLRNLA-VGLLVDLY--QPATLPWRLVV---------------GDGPEWDIAD 121
Query: 168 SFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKLKLITVEDDYT 227
+F NS KEA ++ NGN K +M++S+ LW +V + + ++ +V+ +L
Sbjct: 122 TFTNSAKEADFVRNGNAKQIMSLSKEHSTALWNAVQDNDHVSFGKVNRRL---------- 171
Query: 228 VKLNSSSKSQQGTGETDFAGQVKTGRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFINR 287
LN+ S + +P+R+Y+ S D D +
Sbjct: 172 --LNTPSPFKN---------------VPIRIYIPSSPNDTGDATPG-------SFKVVQN 207
Query: 288 PVEVRTEEGKCFTLRDAIKTLLPEYF 313
V R TL A+K++LP F
Sbjct: 208 LVSPRLPNRAPQTLGAALKSMLPTLF 233
>sp|Q75BY9|ATG5_ASHGO Autophagy protein 5 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=ATG5 PE=3 SV=2
Length = 293
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 77/187 (41%), Gaps = 19/187 (10%)
Query: 50 EARKYVWEGAIPLQIHLHESEVTTLPPPPPAL--ILAPRIGYL----PLLVGLIKPYFGS 103
E R+ W G + +++ L+ V P + PR YL P ++ ++
Sbjct: 6 ELRQRTWSGMLNVEVVLNPKLVVQGMPDEQVRCHLRIPRESYLVLHLPFVLNKLRGVLRQ 65
Query: 104 SLPPGVDTIWFEYKGLPLKWYTPTGVLFDLLCA--EPERP----------WNLTVHFRGY 151
+ WF + + + W P G L+D L ER W LT+++
Sbjct: 66 EVKDAFHGWWFGMEDVLVHWNHPVGTLYDSLVGLRPQERAAQFQANTLTMWTLTLNYSED 125
Query: 152 PVHVLIP-CEGEDSVKWSFINSLKEAAYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAY 210
+P G V+ + + K+A YII+G+ K +M++S D W V+ + +
Sbjct: 126 ARDGSVPLVGGMQQVEDFWRHQWKQACYIIHGSSKQIMSLSIPDSKTFWDCVLQRDERVF 185
Query: 211 LRVSSKL 217
++S++
Sbjct: 186 RGIASRI 192
>sp|Q6C4Q6|ATG5_YARLI Autophagy protein 5 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=ATG5 PE=3 SV=2
Length = 256
Score = 38.9 bits (89), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 128 GVLFDLLCA-EP------ERPWNLTVHF---RGYPVHVLIPCEGEDSVKWSFINSLKEAA 177
G+ +DLL +P + PW LT+ YP +L+ + ++K +I+ LKEA
Sbjct: 57 GLSYDLLTGLDPSNPDTVQSPWILTLQVDQKEEYPKGLLLRIPTKQTLKDYWIHQLKEAC 116
Query: 178 YIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVSSKL 217
+GN VM++S ++ ++W S+++ + + + + + +
Sbjct: 117 VSRDGNANRVMSLSNANSQKMWDSLVSHDFKTFWSIMTTI 156
>sp|A6KZP0|MNMG_BACV8 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 /
NCTC 11154) GN=mnmG PE=3 SV=1
Length = 623
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 246 AGQVKTGRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFINRPVEVRTEEG-KCFTLRDA 304
AG++KTG PVR+ SV D + +D + + + SF++ P +++ + CFT +
Sbjct: 192 AGRMKTG-TPVRIDGRSVHYDLMETQDGEND--FHRFSFMSEPRKLKQLQCWTCFT-NEE 247
Query: 305 IKTLLPEYFTDKPLFNDE 322
+ +L + D PLFN +
Sbjct: 248 VHEILRKGLPDSPLFNGQ 265
>sp|Q60992|VAV2_MOUSE Guanine nucleotide exchange factor VAV2 OS=Mus musculus GN=Vav2
PE=1 SV=1
Length = 868
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 15/82 (18%)
Query: 64 IHLHESEVTTLPP---PPPALILAPRIGYLPLLVGLIKPYFGSSLPPGVDTIWFEYKGLP 120
+ H+ + +PP PA + AP G P +V ++ Y G+ PPG + F+
Sbjct: 549 VGAHKECLEVIPPCKMSSPADVDAPGAGPGPKMVA-VQNYHGNPAPPGKPVLTFQ----- 602
Query: 121 LKWYTPTGVLFDLLCAEPERPW 142
TG + +LL +P+ PW
Sbjct: 603 ------TGDVIELLRGDPDSPW 618
>sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing protein kinase At4g31390,
chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=1
SV=1
Length = 682
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 177 AYIINGNCKNVMNMSQSDQVELWRSVMNGNLEAYLRVS---SKLKLITVEDDYTV---KL 230
AY+ GN V +SQ ++ L +V++ E Y ++ ++L + + D + L
Sbjct: 415 AYVDFGN---VAVLSQQNKQILIDAVVHAVNEDYGEMANDFTRLGFLAKDTDVSPIVPAL 471
Query: 231 NSSSKSQQGTGETDFAGQVKTGRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFINRPVE 290
+ ++ G G DF + TG+ +Y D P I ++ S + R
Sbjct: 472 EAIWQNSAGKGLADFNFRSVTGQFNKLVY------------DFP-IRIPERFSLVIR--S 516
Query: 291 VRTEEGKCFTLRDAIKTLLPEY-FTDKPLFNDESPKLEDEEMNLSSEDAGSNKNTEVEEI 349
+ T+EG CFTL+ K L Y + K L D +P L + + + +D G + +E +
Sbjct: 517 LLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKD-GVFQWKRLENL 575
Query: 350 L---YEHVTRNAEIKLVRIQGIEPKLEI 374
L E+V + + +R++ +E KL++
Sbjct: 576 LSLAKENVAKMSSNPNLRVKRVESKLDL 603
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,255,040
Number of Sequences: 539616
Number of extensions: 6873698
Number of successful extensions: 17591
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 17467
Number of HSP's gapped (non-prelim): 64
length of query: 379
length of database: 191,569,459
effective HSP length: 119
effective length of query: 260
effective length of database: 127,355,155
effective search space: 33112340300
effective search space used: 33112340300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)