BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035509
(140 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3US6|A Chain A, Crystal Structure Of Histidine-Containing Phosphotransfer
Protein Mthpt1 From Medicago Truncatula
Length = 153
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%)
Query: 1 MENNPLHQQIATMRQSFLDEEILNDQFIQLESMATEDDPAFAEDTVSLYFQETTKIIATL 60
ME + +Q +S E L+ QF+QL+ + E++P F + VSL+F ++ +I+ L
Sbjct: 1 MEVGQMRRQWVDYIKSMFMEGFLDGQFLQLQQLQDENNPEFVFEVVSLFFDDSERILKDL 60
Query: 61 EEEFVKDPIDYNALEKCLHDFKGLCVSIGASKVLIEVNKARACCDNGNIEGGKAALEKVK 120
+ ID+ ++ +H FKG SIGA +V R C+ NI+ + L++VK
Sbjct: 61 SFAVDQQSIDFKKVDAHVHQFKGSSASIGAQRVKNSCVAFRNFCEEQNIDACRRCLQQVK 120
Query: 121 VEQETLKAKLDSYFQLVKQ 139
E +K KL++ +L +Q
Sbjct: 121 QEYLLVKNKLETLLRLEQQ 139
>pdb|4EUK|B Chain B, Crystal Structure
Length = 159
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 69/125 (55%)
Query: 15 QSFLDEEILNDQFIQLESMATEDDPAFAEDTVSLYFQETTKIIATLEEEFVKDPIDYNAL 74
+S E IL+ QF+QL+ + E +P F V+L+FQ++ +I+ L + +D+ +
Sbjct: 20 KSLFLEGILDSQFLQLQQLQDESNPDFVSQVVTLFFQDSDRILNDLSLSLDQQVVDFKKV 79
Query: 75 EKCLHDFKGLCVSIGASKVLIEVNKARACCDNGNIEGGKAALEKVKVEQETLKAKLDSYF 134
+ +H KG SIGA +V R+ C+ N+E L++VK E +K +L++ F
Sbjct: 80 DPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQEYYLVKNRLETLF 139
Query: 135 QLVKQ 139
+L +Q
Sbjct: 140 KLEQQ 144
>pdb|1WN0|A Chain A, Crystal Structure Of Histidine-containing Phosphotransfer
Protein, Zmhp2, From Maize
pdb|1WN0|B Chain B, Crystal Structure Of Histidine-containing Phosphotransfer
Protein, Zmhp2, From Maize
pdb|1WN0|C Chain C, Crystal Structure Of Histidine-containing Phosphotransfer
Protein, Zmhp2, From Maize
pdb|1WN0|D Chain D, Crystal Structure Of Histidine-containing Phosphotransfer
Protein, Zmhp2, From Maize
Length = 145
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 1 MENNPLHQQIATMRQSFLDEEILNDQFIQLESMATEDD--PAFAEDTVSLYFQETTKIIA 58
M L +Q+ + S ++++QF QL+ M ED P F + V+L+ + +II+
Sbjct: 1 MAAAALREQLNALLSSMFASGLVDEQFQQLQ-MLQEDGGTPGFVAEVVTLFCDDADRIIS 59
Query: 59 TLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASKVLIEVNKARACCDNGNIEGGKAALEK 118
L + +D++ ++ +H KG S+GA KV + R C + N +G AL
Sbjct: 60 ELAALLDQPIVDFDKVDAYVHQLKGSSASVGAQKVKFTCMQFRQLCQDKNRDGCIMALAV 119
Query: 119 VKVEQETLKAKLDS 132
V+ E L+ K +
Sbjct: 120 VRNEFYDLRNKFQT 133
>pdb|1YVI|A Chain A, X-Ray Structure Of Putative Histidine-Containing
Phosphotransfer Protein From Rice, Ak104879
pdb|1YVI|B Chain B, X-Ray Structure Of Putative Histidine-Containing
Phosphotransfer Protein From Rice, Ak104879
pdb|2Q4F|A Chain A, Ensemble Refinement Of The Crystal Structure Of Putative
Histidine- Containing Phosphotransfer Protein From Rice,
Ak104879
pdb|2Q4F|B Chain B, Ensemble Refinement Of The Crystal Structure Of Putative
Histidine- Containing Phosphotransfer Protein From Rice,
Ak104879
Length = 149
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 6 LHQQIATMRQSFLDEEILNDQFIQLESMATEDD-PAFAEDTVSLYFQETTKII---ATLE 61
L Q+ + S + ++++QF QL+ + E P F + V+L+ + +II ATL
Sbjct: 6 LRDQLTALLSSMFSQGLVDEQFQQLQMLQDEGGTPGFVSEVVTLFCDDADRIINEIATLL 65
Query: 62 EEFVKDPIDYNALEKCLHDFKGLCVSIGASKVLIEVNKARACCDNGNIEGGKAALEKVKV 121
E+ V ++++ ++ +H KG S+GA KV + R C + + +G AL V+
Sbjct: 66 EQPV---VNFDKVDAYVHQLKGSSASVGAQKVKFTCMQFRQFCQDKSRDGCLMALAVVRN 122
Query: 122 EQETLKAKLDSYFQLVKQ 139
+ L+ K + QL +Q
Sbjct: 123 DFYDLRNKFQTMLQLEQQ 140
>pdb|1QX4|A Chain A, Structrue Of S127p Mutant Of Cytochrome B5 Reductase
pdb|1QX4|B Chain B, Structrue Of S127p Mutant Of Cytochrome B5 Reductase
Length = 274
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 22/124 (17%)
Query: 32 SMATEDDPAFAEDTVSLYFQET-------TKIIATLEEEFVKDPIDYNALEKCLHDFKGL 84
++++DD F + V +YF+ET K+ LE + D I++ GL
Sbjct: 69 PVSSDDDKGFVDLVVKVYFKETHPKFPAGGKMPQYLENMNIGDTIEFRGPN-------GL 121
Query: 85 CVSIGASKVLIEVNK-----ARACCDNGNIEGGKAALEKVKVEQETLKAKLDS---YFQL 136
V G K I +K R G I GG ++V + LK D Y
Sbjct: 122 LVYQGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLF 181
Query: 137 VKQS 140
QS
Sbjct: 182 ANQS 185
>pdb|1IB0|A Chain A, Crystal Structure Of Rat B5r In Complex With Fad And Nad
pdb|1I7P|A Chain A, Crystal Structure Of Rat B5r In Complex With Fad
Length = 274
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 22/124 (17%)
Query: 32 SMATEDDPAFAEDTVSLYFQET-------TKIIATLEEEFVKDPIDYNALEKCLHDFKGL 84
++++DD F + V +YF+ET K+ LE + D I++ GL
Sbjct: 69 PVSSDDDKGFVDLVVKVYFKETHPKFPAGGKMSQYLENMNIGDTIEFRGPN-------GL 121
Query: 85 CVSIGASKVLIEVNK-----ARACCDNGNIEGGKAALEKVKVEQETLKAKLDS---YFQL 136
V G K I +K R G I GG ++V + LK D Y
Sbjct: 122 LVYQGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLF 181
Query: 137 VKQS 140
QS
Sbjct: 182 ANQS 185
>pdb|3GJX|A Chain A, Crystal Structure Of The Nuclear Export Complex Crm1-
Snurportin1-Rangtp
pdb|3GJX|D Chain D, Crystal Structure Of The Nuclear Export Complex Crm1-
Snurportin1-Rangtp
pdb|3NBY|A Chain A, Crystal Structure Of The Pki Nes-Crm1-Rangtp Nuclear
Export Complex
pdb|3NBY|D Chain D, Crystal Structure Of The Pki Nes-Crm1-Rangtp Nuclear
Export Complex
pdb|3NBZ|A Chain A, Crystal Structure Of The Hiv-1 Rev Nes-Crm1-Rangtp Nuclear
Export Complex (Crystal I)
pdb|3NBZ|D Chain D, Crystal Structure Of The Hiv-1 Rev Nes-Crm1-Rangtp Nuclear
Export Complex (Crystal I)
pdb|3NC0|A Chain A, Crystal Structure Of The Hiv-1 Rev Nes-Crm1-Rangtp Nuclear
Export Complex (Crystal Ii)
pdb|3NC0|D Chain D, Crystal Structure Of The Hiv-1 Rev Nes-Crm1-Rangtp Nuclear
Export Complex (Crystal Ii)
pdb|3NC1|A Chain A, Crystal Structure Of The Crm1-Rangtp Complex
Length = 1073
Score = 28.9 bits (63), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 54 TKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVS 87
TK+I+TL +F+ P+ N KCL + G+ VS
Sbjct: 246 TKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVS 279
>pdb|3GB8|A Chain A, Crystal Structure Of Crm1SNURPORTIN-1 Complex
Length = 1071
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 54 TKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVS 87
TK+I+TL +F+ P+ N KCL + G+ VS
Sbjct: 244 TKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVS 277
>pdb|3SRD|A Chain A, Human M2 Pyruvate Kinase In Complex With Fructose 1-6
Bisphosphate And Oxalate.
pdb|3SRD|B Chain B, Human M2 Pyruvate Kinase In Complex With Fructose 1-6
Bisphosphate And Oxalate.
pdb|3SRD|C Chain C, Human M2 Pyruvate Kinase In Complex With Fructose 1-6
Bisphosphate And Oxalate.
pdb|3SRD|D Chain D, Human M2 Pyruvate Kinase In Complex With Fructose 1-6
Bisphosphate And Oxalate.
pdb|3SRH|A Chain A, Human M2 Pyruvate Kinase
pdb|3SRH|B Chain B, Human M2 Pyruvate Kinase
pdb|3SRH|C Chain C, Human M2 Pyruvate Kinase
pdb|3SRH|D Chain D, Human M2 Pyruvate Kinase
Length = 551
Score = 26.2 bits (56), Expect = 7.0, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 103 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 145
>pdb|1T5A|A Chain A, Human Pyruvate Kinase M2
pdb|1T5A|B Chain B, Human Pyruvate Kinase M2
pdb|1T5A|C Chain C, Human Pyruvate Kinase M2
pdb|1T5A|D Chain D, Human Pyruvate Kinase M2
Length = 567
Score = 26.2 bits (56), Expect = 7.0, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 119 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 161
>pdb|3GQY|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GQY|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GQY|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GQY|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GR4|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GR4|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GR4|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3GR4|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3H6O|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3H6O|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3H6O|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3H6O|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3ME3|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3ME3|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3ME3|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3ME3|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
Length = 550
Score = 26.2 bits (56), Expect = 7.0, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 102 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 144
>pdb|1ZJH|A Chain A, Structure Of Human Muscle Pyruvate Kinase (Pkm2)
pdb|4B2D|A Chain A, Human Pkm2 With L-serine And Fbp Bound.
pdb|4B2D|B Chain B, Human Pkm2 With L-serine And Fbp Bound.
pdb|4B2D|C Chain C, Human Pkm2 With L-serine And Fbp Bound
Length = 548
Score = 26.2 bits (56), Expect = 7.2, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 100 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 142
>pdb|4B2D|D Chain D, Human Pkm2 With L-serine And Fbp Bound
Length = 548
Score = 26.2 bits (56), Expect = 7.2, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 100 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 142
>pdb|3SRF|C Chain C, Human M1 Pyruvate Kinase
pdb|3SRF|A Chain A, Human M1 Pyruvate Kinase
pdb|3SRF|B Chain B, Human M1 Pyruvate Kinase
pdb|3SRF|D Chain D, Human M1 Pyruvate Kinase
pdb|3SRF|E Chain E, Human M1 Pyruvate Kinase
pdb|3SRF|F Chain F, Human M1 Pyruvate Kinase
pdb|3SRF|G Chain G, Human M1 Pyruvate Kinase
pdb|3SRF|H Chain H, Human M1 Pyruvate Kinase
Length = 551
Score = 25.8 bits (55), Expect = 7.4, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 103 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 145
>pdb|3U2Z|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3U2Z|B Chain B, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3U2Z|C Chain C, Activator-Bound Structure Of Human Pyruvate Kinase M2
pdb|3U2Z|D Chain D, Activator-Bound Structure Of Human Pyruvate Kinase M2
Length = 533
Score = 25.8 bits (55), Expect = 7.6, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 85 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 127
>pdb|3G2G|A Chain A, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2
pdb|3G2G|B Chain B, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2
pdb|3G2G|C Chain C, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2
pdb|3G2G|D Chain D, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2
Length = 533
Score = 25.8 bits (55), Expect = 7.6, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 85 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 127
>pdb|3BJT|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJT|B Chain B, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJT|C Chain C, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJT|D Chain D, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
Length = 530
Score = 25.8 bits (55), Expect = 7.8, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 82 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 124
>pdb|4G1N|A Chain A, Pkm2 In Complex With An Activator
pdb|4G1N|B Chain B, Pkm2 In Complex With An Activator
pdb|4G1N|C Chain C, Pkm2 In Complex With An Activator
pdb|4G1N|D Chain D, Pkm2 In Complex With An Activator
Length = 518
Score = 25.8 bits (55), Expect = 7.8, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 70 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 112
>pdb|3ROT|A Chain A, Crystal Structure Of Abc Sugar Transporter (Periplasmic
Sugar Binding Protein) From Legionella Pneumophila
pdb|3ROT|B Chain B, Crystal Structure Of Abc Sugar Transporter (Periplasmic
Sugar Binding Protein) From Legionella Pneumophila
Length = 297
Score = 25.8 bits (55), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 4 NPLHQQIATMRQSFLDEEILNDQFIQLESMATEDDPAFAEDTVSLYFQ--ETTKIIATLE 61
NP I ++++ + IL D+ I E + DP + V YF+ T II L
Sbjct: 137 NPQPGHIGLEKRAYGIKTILQDKGIFFEELDVGTDPNQVQSRVKSYFKIHPETNIIFCLT 196
Query: 62 EEFVKDPIDYNALEKCLHDF 81
+ + DP+ L +DF
Sbjct: 197 SQAL-DPLGQXLLHPDRYDF 215
>pdb|1F3W|A Chain A, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|B Chain B, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|C Chain C, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|D Chain D, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|E Chain E, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|F Chain F, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|G Chain G, Recombinant Rabbit Muscle Pyruvate Kinase
pdb|1F3W|H Chain H, Recombinant Rabbit Muscle Pyruvate Kinase
Length = 530
Score = 25.8 bits (55), Expect = 7.9, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 82 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 124
>pdb|1AQF|A Chain A, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|B Chain B, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|C Chain C, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|D Chain D, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|E Chain E, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|F Chain F, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|G Chain G, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1AQF|H Chain H, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L-
Phospholactate
pdb|1A5U|A Chain A, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|B Chain B, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|C Chain C, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|D Chain D, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|E Chain E, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|F Chain F, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|G Chain G, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A5U|H Chain H, Pyruvate Kinase Complex With Bis Mg-Atp-Na-Oxalate
pdb|1A49|A Chain A, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|B Chain B, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|C Chain C, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|D Chain D, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|E Chain E, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|F Chain F, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|G Chain G, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
pdb|1A49|H Chain H, Bis Mg-Atp-K-Oxalate Complex Of Pyruvate Kinase
Length = 530
Score = 25.8 bits (55), Expect = 7.9, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 82 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 124
>pdb|1PKN|A Chain A, Structure Of Rabbit Muscle Pyruvate Kinase Complexed With
Mn2+, K+, And Pyruvate
Length = 530
Score = 25.8 bits (55), Expect = 8.0, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 82 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 124
>pdb|1F3X|A Chain A, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|B Chain B, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|C Chain C, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|D Chain D, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|E Chain E, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|F Chain F, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|G Chain G, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
pdb|1F3X|H Chain H, S402p Mutant Of Rabbit Muscle Pyruvate Kinase
Length = 530
Score = 25.8 bits (55), Expect = 8.0, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 82 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 124
>pdb|3BJF|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJF|B Chain B, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJF|C Chain C, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
pdb|3BJF|D Chain D, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein
Length = 518
Score = 25.8 bits (55), Expect = 8.0, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 70 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 112
>pdb|3N25|A Chain A, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|B Chain B, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|C Chain C, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|D Chain D, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|E Chain E, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|F Chain F, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|G Chain G, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
pdb|3N25|H Chain H, The Structure Of Muscle Pyruvate Kinase In Complex With
Proline, Pyruvate, And Mn2+
Length = 531
Score = 25.8 bits (55), Expect = 8.5, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 83 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 125
>pdb|2G50|A Chain A, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|B Chain B, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|C Chain C, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|D Chain D, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|E Chain E, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|F Chain F, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|G Chain G, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase.
pdb|2G50|H Chain H, The Location Of The Allosteric Amino Acid Binding Site Of
Muscle Pyruvate Kinase
Length = 530
Score = 25.8 bits (55), Expect = 8.5, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 49 YFQETTKIIATLEEEFVKDPIDYNALEKCLHDFKGLCVSIGASK 92
Y ET K + T E F DPI Y + L D KG + G K
Sbjct: 82 YHAETIKNVRTATESFASDPILYRPVAVAL-DTKGPEIRTGLIK 124
>pdb|2CAZ|B Chain B, Escrt-I Core
pdb|2CAZ|E Chain E, Escrt-I Core
Length = 155
Score = 25.4 bits (54), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 50 FQETTKIIATL---EEEFVKDPID----YNALEKCLHDFKGLCVSIGASKVLIEVNKARA 102
E I+ TL E+ ++KD ID N ++K L FK S ++ A
Sbjct: 48 LSEIYSIVITLDHVEKAYLKDSIDDTQYTNTVDKLLKQFKVYLNSQNKEEINKHFQSIEA 107
Query: 103 CCDNGNIEGGKA 114
CD NI A
Sbjct: 108 FCDTYNITASNA 119
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.132 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,767,889
Number of Sequences: 62578
Number of extensions: 136932
Number of successful extensions: 442
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 435
Number of HSP's gapped (non-prelim): 32
length of query: 140
length of database: 14,973,337
effective HSP length: 89
effective length of query: 51
effective length of database: 9,403,895
effective search space: 479598645
effective search space used: 479598645
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 46 (22.3 bits)