Your job contains 1 sequence.
>035510
HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVF
NLLEPGNISKAICGDQVGTFIDRTGRMS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035510
(88 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2100108 - symbol:AT3G10030 species:3702 "Arabi... 349 1.6e-31 1
TAIR|locus:2093949 - symbol:AT3G18680 species:3702 "Arabi... 220 4.3e-18 1
TIGR_CMR|CHY_1785 - symbol:CHY_1785 "uridylate kinase" sp... 184 2.3e-14 1
TIGR_CMR|GSU_1919 - symbol:GSU_1919 "uridylate kinase" sp... 182 3.8e-14 1
TIGR_CMR|BA_3963 - symbol:BA_3963 "uridylate kinase" spec... 165 2.4e-12 1
UNIPROTKB|P65929 - symbol:pyrH "Uridylate kinase" species... 154 5.5e-11 1
TIGR_CMR|ECH_0266 - symbol:ECH_0266 "uridylate kinase" sp... 145 4.5e-10 1
TIGR_CMR|CBU_1384 - symbol:CBU_1384 "uridylate kinase" sp... 142 9.9e-10 1
TIGR_CMR|SO_1631 - symbol:SO_1631 "uridylate kinase" spec... 139 2.2e-09 1
TIGR_CMR|DET_0375 - symbol:DET_0375 "uridylate kinase" sp... 137 3.7e-09 1
UNIPROTKB|P0A7E9 - symbol:pyrH "PyrH" species:83333 "Esch... 134 8.2e-09 1
TIGR_CMR|CJE_1410 - symbol:CJE_1410 "uridylate kinase" sp... 129 3.0e-08 1
TIGR_CMR|APH_0111 - symbol:APH_0111 "uridylate kinase" sp... 127 5.5e-08 1
TIGR_CMR|CPS_1555 - symbol:CPS_1555 "uridylate kinase" sp... 121 2.7e-07 1
TIGR_CMR|VC_2258 - symbol:VC_2258 "uridylate kinase" spec... 119 4.4e-07 1
TIGR_CMR|NSE_0946 - symbol:NSE_0946 "uridylate kinase" sp... 107 8.8e-06 1
TIGR_CMR|SPO_1662 - symbol:SPO_1662 "uridylate kinase" sp... 105 1.8e-05 1
TIGR_CMR|BA_1797 - symbol:BA_1797 "uridylate kinase" spec... 97 0.00013 1
>TAIR|locus:2100108 [details] [associations]
symbol:AT3G10030 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA;ISS] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001005 InterPro:IPR001048
Pfam:PF00696 SMART:SM00717 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003682 GO:GO:0008652 GO:GO:0016301
Gene3D:3.40.1160.10 SUPFAM:SSF53633 eggNOG:COG0528
HOGENOM:HOG000047187 EMBL:AF375431 EMBL:AY120687 IPI:IPI00535263
RefSeq:NP_566366.1 UniGene:At.28740 ProteinModelPortal:Q94JR1
SMR:Q94JR1 IntAct:Q94JR1 STRING:Q94JR1 PaxDb:Q94JR1 PRIDE:Q94JR1
EnsemblPlants:AT3G10030.1 GeneID:820164 KEGG:ath:AT3G10030
TAIR:At3g10030 InParanoid:Q94JR1 OMA:QINNVKS PhylomeDB:Q94JR1
ProtClustDB:CLSN2684524 Genevestigator:Q94JR1 Uniprot:Q94JR1
Length = 542
Score = 349 (127.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 63/86 (73%), Positives = 76/86 (88%)
Query: 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVF 60
+AE V+KGTNVDGVYDCHS+D+N TFEHISF++L SRG MD+ AL+FC+ENSIPVVVF
Sbjct: 454 NAEAVVKGTNVDGVYDCHSQDSNVTFEHISFQDLASRGLTSMDTMALNFCEENSIPVVVF 513
Query: 61 NLLEPGNISKAICGDQVGTFIDRTGR 86
N LE GNI+KA+CG+QVGT IDR+GR
Sbjct: 514 NFLEAGNITKALCGEQVGTLIDRSGR 539
>TAIR|locus:2093949 [details] [associations]
symbol:AT3G18680 species:3702 "Arabidopsis thaliana"
[GO:0006221 "pyrimidine nucleotide biosynthetic process"
evidence=IEA;ISS] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0033862 "UMP kinase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0006399 "tRNA metabolic process"
evidence=RCA] [GO:0009073 "aromatic amino acid family biosynthetic
process" evidence=RCA] [GO:0009658 "chloroplast organization"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0016226
"iron-sulfur cluster assembly" evidence=RCA] [GO:0045036 "protein
targeting to chloroplast" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008652 EMBL:AB026654
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0006221
UniGene:At.6380 UniGene:At.69640 eggNOG:COG0528
HOGENOM:HOG000047187 KO:K09903 HAMAP:MF_01220_B PANTHER:PTHR26059
TIGRFAMs:TIGR02075 EMBL:AY050828 EMBL:AY091161 IPI:IPI00526120
RefSeq:NP_188498.1 ProteinModelPortal:Q9LSA9 SMR:Q9LSA9
IntAct:Q9LSA9 STRING:Q9LSA9 PaxDb:Q9LSA9 PRIDE:Q9LSA9 ProMEX:Q9LSA9
EnsemblPlants:AT3G18680.1 GeneID:821399 KEGG:ath:AT3G18680
TAIR:At3g18680 OMA:IKGKHSG PhylomeDB:Q9LSA9 ProtClustDB:CLSN2915342
ArrayExpress:Q9LSA9 Genevestigator:Q9LSA9 Uniprot:Q9LSA9
Length = 339
Score = 220 (82.5 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 47/86 (54%), Positives = 63/86 (73%)
Query: 1 HAEVVLKGTNVDGVYDCHSRDN-NATF-EHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
+AEVVLK TNVDGV+D + N NA + ++++E+ S+ MD TA++ C EN+IPVV
Sbjct: 245 NAEVVLKATNVDGVFDDDPKRNPNARLLDSLTYQEVTSKDLSVMDMTAITLCQENNIPVV 304
Query: 59 VFNLLEPGNISKAICGDQVGTFIDRT 84
VFNL EPGNI+KAI G++VGT I T
Sbjct: 305 VFNLSEPGNIAKAIKGERVGTLIGGT 330
>TIGR_CMR|CHY_1785 [details] [associations]
symbol:CHY_1785 "uridylate kinase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0009041 "uridylate
kinase activity" evidence=ISS] [GO:0015949 "nucleobase-containing
small molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
RefSeq:YP_360605.1 HSSP:P65938 ProteinModelPortal:Q3AB79 SMR:Q3AB79
STRING:Q3AB79 GeneID:3727662 KEGG:chy:CHY_1785 PATRIC:21276681
BioCyc:CHYD246194:GJCN-1784-MONOMER Uniprot:Q3AB79
Length = 242
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 39/82 (47%), Positives = 53/82 (64%)
Query: 2 AEVVLKGTNVDGVYDCHSRDN-NAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
AEV+L VDGVYD N NA F+ + + E+ +RG MDSTA S C +N+IP++V
Sbjct: 156 AEVILMAKRVDGVYDSDPLKNPNAQKFDELEYIEVLNRGLGVMDSTATSLCMDNNIPLIV 215
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
FNL PGNI + I G+ +GT +
Sbjct: 216 FNLEVPGNIKRVILGENIGTIV 237
>TIGR_CMR|GSU_1919 [details] [associations]
symbol:GSU_1919 "uridylate kinase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P0A7E9 RefSeq:NP_952968.1
ProteinModelPortal:Q74BW2 SMR:Q74BW2 GeneID:2685329
KEGG:gsu:GSU1919 PATRIC:22026703
BioCyc:GSUL243231:GH27-1976-MONOMER Uniprot:Q74BW2
Length = 239
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 33/82 (40%), Positives = 55/82 (67%)
Query: 2 AEVVLKGTNVDGVYDCH-SRDNNAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A+V+LKGT VDGVY +D A + +++ E+ +G MD+TA S C +N++P++V
Sbjct: 155 ADVILKGTKVDGVYSADPKKDPTAIKYPRLTYLEVLKKGLQVMDATATSLCMDNNLPIIV 214
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
F++ GNI K +CG+++GT +
Sbjct: 215 FDITTYGNIKKVVCGEEIGTIV 236
>TIGR_CMR|BA_3963 [details] [associations]
symbol:BA_3963 "uridylate kinase" species:198094 "Bacillus
anthracis str. Ames" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
RefSeq:NP_846206.1 RefSeq:YP_020602.2 RefSeq:YP_029927.1
ProteinModelPortal:Q81WL0 SMR:Q81WL0 DNASU:1086816
EnsemblBacteria:EBBACT00000009368 EnsemblBacteria:EBBACT00000014903
EnsemblBacteria:EBBACT00000024399 GeneID:1086816 GeneID:2819541
GeneID:2850619 KEGG:ban:BA_3963 KEGG:bar:GBAA_3963 KEGG:bat:BAS3676
ProtClustDB:PRK00358 BioCyc:BANT260799:GJAJ-3734-MONOMER
BioCyc:BANT261594:GJ7F-3851-MONOMER Uniprot:Q81WL0
Length = 240
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 35/83 (42%), Positives = 55/83 (66%)
Query: 2 AEVVLKG-TNVDGVYDCH-SRDNNAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
A+V+L NVDGVY+ S D AT +E +++ ++ G MDSTA S C +N IP++
Sbjct: 155 ADVILMAKNNVDGVYNADPSIDPTATKYETLTYLDVLKEGLGVMDSTASSLCMDNDIPLI 214
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VF+++E GNI +A+ G+ +GT +
Sbjct: 215 VFSVMEKGNIKRAVLGENIGTVV 237
>UNIPROTKB|P65929 [details] [associations]
symbol:pyrH "Uridylate kinase" species:1773 "Mycobacterium
tuberculosis" [GO:0000287 "magnesium ion binding" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0006225 "UDP biosynthetic
process" evidence=IDA] [GO:0033862 "UMP kinase activity"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] [GO:0051289
"protein homotetramerization" evidence=IPI] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005886 GO:GO:0005524
GO:GO:0005737 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 GO:GO:0006200 GO:GO:0008652
GO:GO:0051289 EMBL:BX842581 Gene3D:3.40.1160.10 SUPFAM:SSF53633
GO:GO:0033862 GO:GO:0006225 GO:GO:0044210 eggNOG:COG0528
HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR HAMAP:MF_01220_B
TIGRFAMs:TIGR02075 ProtClustDB:PRK00358 PIR:F70924
RefSeq:NP_217399.1 RefSeq:NP_337462.2 RefSeq:YP_006516336.1
PDB:3NWY PDBsum:3NWY ProteinModelPortal:P65929 SMR:P65929
PRIDE:P65929 EnsemblBacteria:EBMYCT00000003573
EnsemblBacteria:EBMYCT00000069614 GeneID:13317676 GeneID:887709
GeneID:925329 KEGG:mtc:MT2951 KEGG:mtu:Rv2883c KEGG:mtv:RVBD_2883c
PATRIC:18128260 TubercuList:Rv2883c EvolutionaryTrace:P65929
Uniprot:P65929
Length = 261
Score = 154 (59.3 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 2 AEVVLKGTNVDGVYDCHSRDNNAT--FEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A+VVL VDGV+ R N +S RE+ RG D+TA S C +N +P++V
Sbjct: 178 ADVVLMAKAVDGVFAEDPRVNPEAELLTAVSHREVLDRGLRVADATAFSLCMDNGMPILV 237
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
FNLL GNI++A+ G+++GT +
Sbjct: 238 FNLLTDGNIARAVRGEKIGTLV 259
>TIGR_CMR|ECH_0266 [details] [associations]
symbol:ECH_0266 "uridylate kinase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 RefSeq:YP_507087.1 ProteinModelPortal:Q2GHJ6
STRING:Q2GHJ6 GeneID:3928016 KEGG:ech:ECH_0266 PATRIC:20576049
BioCyc:ECHA205920:GJNR-266-MONOMER Uniprot:Q2GHJ6
Length = 244
Score = 145 (56.1 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 3 EVVLKGTNVDGVYDCHSRDN-NAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVVVF 60
+ + KGT VDGVY + N +A ++ IS+R+L S MD A+S E+S+P++VF
Sbjct: 162 DAIFKGTQVDGVYSADPKKNADAVRYDKISYRDLLSLDLKIMDVAAVSLAREHSVPIIVF 221
Query: 61 NLLEPGNISKAICGDQVGTFI 81
NL +PG+ + I GD + T I
Sbjct: 222 NLGQPGSFADIIRGDGLYTTI 242
>TIGR_CMR|CBU_1384 [details] [associations]
symbol:CBU_1384 "uridylate kinase" species:227377
"Coxiella burnetii RSA 493" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P0A7E9 RefSeq:NP_820373.1
ProteinModelPortal:Q83BV3 SMR:Q83BV3 PRIDE:Q83BV3 GeneID:1209290
KEGG:cbu:CBU_1384 PATRIC:17931513
BioCyc:CBUR227377:GJ7S-1372-MONOMER Uniprot:Q83BV3
Length = 243
Score = 142 (55.0 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 31/85 (36%), Positives = 52/85 (61%)
Query: 1 HAEVVLKGTNVDGVY-DCHSRDNNAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
+A+VVLK TNVDGVY D +++ A ++H+S++E + MD A C + ++P+
Sbjct: 157 NADVVLKATNVDGVYSDDPAKNPQAKLYKHLSYQEALKKELAVMDLAAFCQCRDYNMPLR 216
Query: 59 VFNLLEPGNISKAICGDQVGTFIDR 83
VFN+ +PG + I + GT +D+
Sbjct: 217 VFNINKPGALLSVIMNQEEGTLVDQ 241
>TIGR_CMR|SO_1631 [details] [associations]
symbol:SO_1631 "uridylate kinase" species:211586
"Shewanella oneidensis MR-1" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P0A7E9 RefSeq:NP_717242.1
ProteinModelPortal:Q8EGH3 SMR:Q8EGH3 GeneID:1169425
KEGG:son:SO_1631 PATRIC:23522896 Uniprot:Q8EGH3
Length = 242
Score = 139 (54.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 29/82 (35%), Positives = 51/82 (62%)
Query: 2 AEVVLKGTNVDGVY-DCHSRDNNAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
AEVVLKGT VDGVY D ++ A ++ +++ E+ + MD A + ++ +P++V
Sbjct: 158 AEVVLKGTKVDGVYSDDPMKNPEAVKYDELTYTEVLDKELKVMDLAAFTMARDHDMPILV 217
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
FN+ +PG + + + G++ GT I
Sbjct: 218 FNMNKPGALRRVVMGEEEGTMI 239
>TIGR_CMR|DET_0375 [details] [associations]
symbol:DET_0375 "uridylate kinase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P65938 RefSeq:YP_181121.1
ProteinModelPortal:Q3Z9H8 STRING:Q3Z9H8 GeneID:3230311
KEGG:det:DET0375 PATRIC:21607819 BioCyc:DETH243164:GJNF-375-MONOMER
Uniprot:Q3Z9H8
Length = 241
Score = 137 (53.3 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 2 AEVVLKGTN-VDGVYDCHSRDN-NAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
A+V+L N VDGVY + + AT F+H++ E ++ MD+TALS C +N +P++
Sbjct: 155 ADVLLMAKNKVDGVYTADPKKHPEATLFQHLTHMEAINKRLQVMDATALSLCLDNKLPII 214
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VF+L ++ AI G +GT I
Sbjct: 215 VFDLQSSESLVSAISGQPIGTLI 237
>UNIPROTKB|P0A7E9 [details] [associations]
symbol:pyrH "PyrH" species:83333 "Escherichia coli K-12"
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=IEA] [GO:0044210 "'de novo' CTP biosynthetic process"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042802
"identical protein binding" evidence=IDA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0033862 "UMP kinase activity" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006221 "pyrimidine nucleotide
biosynthetic process" evidence=IEA] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008652 EMBL:U70214
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 EMBL:D13334
GO:GO:0044210 eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903
OMA:RHMEKGR HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 EMBL:X78809 PIR:B45269 RefSeq:NP_414713.1
RefSeq:YP_488473.1 PDB:2BND PDB:2BNE PDB:2BNF PDB:2V4Y PDBsum:2BND
PDBsum:2BNE PDBsum:2BNF PDBsum:2V4Y ProteinModelPortal:P0A7E9
SMR:P0A7E9 DIP:DIP-31830N IntAct:P0A7E9 MINT:MINT-1222953
PaxDb:P0A7E9 PRIDE:P0A7E9 EnsemblBacteria:EBESCT00000004594
EnsemblBacteria:EBESCT00000016112 GeneID:12933231 GeneID:944989
KEGG:ecj:Y75_p0167 KEGG:eco:b0171 PATRIC:32115451 EchoBASE:EB1501
EcoGene:EG11539 BioCyc:EcoCyc:UMPKI-MONOMER
BioCyc:ECOL316407:JW0166-MONOMER BioCyc:MetaCyc:UMPKI-MONOMER
BRENDA:2.7.4.22 SABIO-RK:P0A7E9 EvolutionaryTrace:P0A7E9
Genevestigator:P0A7E9 Uniprot:P0A7E9
Length = 241
Score = 134 (52.2 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 28/82 (34%), Positives = 50/82 (60%)
Query: 2 AEVVLKGTNVDGVYDCH-SRDNNAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A+VVLK T VDGV+ ++D AT +E +++ E+ + MD A + ++ +P+ V
Sbjct: 158 ADVVLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRV 217
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
FN+ +PG + + + G++ GT I
Sbjct: 218 FNMNKPGALRRVVMGEKEGTLI 239
>TIGR_CMR|CJE_1410 [details] [associations]
symbol:CJE_1410 "uridylate kinase" species:195099
"Campylobacter jejuni RM1221" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:CP000025 GenomeReviews:CP000025_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 RefSeq:YP_179396.1 HSSP:P0A7E9
ProteinModelPortal:Q5HTI9 STRING:Q5HTI9 GeneID:3231916
KEGG:cjr:CJE1410 PATRIC:20044622
BioCyc:CJEJ195099:GJC0-1437-MONOMER Uniprot:Q5HTI9
Length = 239
Score = 129 (50.5 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 2 AEVVLKGTNVDGVYDCHSRD-NNATFEH-ISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A++V+K T V+GVYD + ++A F + +S+ E MD TA++ +N +P+VV
Sbjct: 154 ADMVIKATKVNGVYDKDPKQFDDAVFLNTLSYDEAMQDNIKVMDDTAIALAKDNKLPIVV 213
Query: 60 FNLLEPGNISKAICGD 75
N+ E GN+ K I GD
Sbjct: 214 CNMFEEGNLLKIIQGD 229
>TIGR_CMR|APH_0111 [details] [associations]
symbol:APH_0111 "uridylate kinase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
RefSeq:YP_504739.1 ProteinModelPortal:Q2GLL2 STRING:Q2GLL2
GeneID:3930967 KEGG:aph:APH_0111 PATRIC:20948786 eggNOG:COG0528
HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
BioCyc:APHA212042:GHPM-146-MONOMER HAMAP:MF_01220_B
PANTHER:PTHR26059 TIGRFAMs:TIGR02075 Uniprot:Q2GLL2
Length = 244
Score = 127 (49.8 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 32/85 (37%), Positives = 50/85 (58%)
Query: 3 EVVLKGTNVDGVYDCH-SRDNNAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVVVF 60
+ + KGT VDGVY +D +AT ++ IS+ +L + MD+ A+S ENSIP++VF
Sbjct: 162 DAIFKGTQVDGVYSSDPKKDCSATRYDKISYHDLLASDLKIMDAAAVSLARENSIPIIVF 221
Query: 61 NLLEPGNISKAICGDQVGTFIDRTG 85
+L + S+ + G GTF +G
Sbjct: 222 DLGKENAFSEVMKGR--GTFTTISG 244
>TIGR_CMR|CPS_1555 [details] [associations]
symbol:CPS_1555 "uridylate kinase" species:167879
"Colwellia psychrerythraea 34H" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P65938 RefSeq:YP_268297.1
ProteinModelPortal:Q485G8 SMR:Q485G8 STRING:Q485G8 PRIDE:Q485G8
GeneID:3522188 KEGG:cps:CPS_1555 PATRIC:21466317
BioCyc:CPSY167879:GI48-1636-MONOMER Uniprot:Q485G8
Length = 247
Score = 121 (47.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 2 AEVVLKGTNVDGVY--DCHSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A+ VLK T VDGVY D + +S+ E+ + MD A + +++IP+ V
Sbjct: 158 ADAVLKATKVDGVYSEDPAKNPEAELYSELSYDEVLDKELKVMDLAAFTLARDHNIPIRV 217
Query: 60 FNLLEPGNISKAICGDQVGTFIDRTGR 86
FN+ +PG + I G+ GT I R
Sbjct: 218 FNMNKPGALKSVIMGNTEGTVISHKKR 244
>TIGR_CMR|VC_2258 [details] [associations]
symbol:VC_2258 "uridylate kinase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 KO:K09903 OMA:RHMEKGR HAMAP:MF_01220_B
PANTHER:PTHR26059 TIGRFAMs:TIGR02075 ProtClustDB:PRK00358
PIR:H82099 RefSeq:NP_231889.1 ProteinModelPortal:Q9KPV4 SMR:Q9KPV4
PRIDE:Q9KPV4 DNASU:2613180 GeneID:2613180 KEGG:vch:VC2258
PATRIC:20083559 Uniprot:Q9KPV4
Length = 243
Score = 119 (46.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 2 AEVVLKGTNVDGVY--DCHSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A+VVLK T VDGVY D + + ++ +++ ++ + MD A + ++ +P+ V
Sbjct: 158 ADVVLKATKVDGVYSADPVANPDAQLYDKLAYNDVLEKELKVMDLAAFTLARDHKMPIRV 217
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
FN+ +PG + + + G+ GT I
Sbjct: 218 FNMNKPGALRRVVMGEAEGTLI 239
>TIGR_CMR|NSE_0946 [details] [associations]
symbol:NSE_0946 "uridylate kinase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0009041 "uridylate
kinase activity" evidence=ISS] [GO:0015949 "nucleobase-containing
small molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 Gene3D:3.40.1160.10 SUPFAM:SSF53633 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
RefSeq:YP_506810.1 ProteinModelPortal:Q2GCI6 STRING:Q2GCI6
GeneID:3931337 KEGG:nse:NSE_0946 PATRIC:22681871
ProtClustDB:CLSK2527950 BioCyc:NSEN222891:GHFU-948-MONOMER
Uniprot:Q2GCI6
Length = 233
Score = 107 (42.7 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 3 EVVLKGTNVDGVYDCHSRDN-NAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVVVF 60
+V+LKGT VDG+Y R N NA +S+ ++ S+ +DS+A+S +N +PVV+F
Sbjct: 150 DVMLKGTLVDGIYSDDPRTNINAERITKLSYTDVLSKKLRVLDSSAVSIARDNGMPVVIF 209
Query: 61 NL 62
+L
Sbjct: 210 SL 211
>TIGR_CMR|SPO_1662 [details] [associations]
symbol:SPO_1662 "uridylate kinase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P65938 RefSeq:YP_166901.1
ProteinModelPortal:Q5LSV4 GeneID:3192709 KEGG:sil:SPO1662
PATRIC:23376649 Uniprot:Q5LSV4
Length = 251
Score = 105 (42.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 25/81 (30%), Positives = 46/81 (56%)
Query: 3 EVVLKGTN-VDGVYDCHS--RDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
E + G N VDGVYD D+ ++ IS+ E+ ++ MD++A++ +N++P++V
Sbjct: 168 EAIFMGKNGVDGVYDKDPALHDDAVRYDEISYDEVLAKRLKVMDASAIALARDNNLPLIV 227
Query: 60 FNLLEPGNISKAICGDQVGTF 80
F+L G + G+ GT+
Sbjct: 228 FSLDTAGGFRGILAGE--GTY 246
>TIGR_CMR|BA_1797 [details] [associations]
symbol:BA_1797 "uridylate kinase" species:198094 "Bacillus
anthracis str. Ames" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
HOGENOM:HOG000047187 KO:K09903 HAMAP:MF_01220_B PANTHER:PTHR26059
TIGRFAMs:TIGR02075 RefSeq:NP_844222.1 RefSeq:YP_018435.1
RefSeq:YP_027931.1 PDB:2JJX PDBsum:2JJX ProteinModelPortal:Q81S73
IntAct:Q81S73 DNASU:1086122 EnsemblBacteria:EBBACT00000008266
EnsemblBacteria:EBBACT00000018753 EnsemblBacteria:EBBACT00000020173
GeneID:1086122 GeneID:2814751 GeneID:2849897 KEGG:ban:BA_1797
KEGG:bar:GBAA_1797 KEGG:bat:BAS1665 OMA:EADNIGM
ProtClustDB:PRK14557 BioCyc:BANT260799:GJAJ-1736-MONOMER
BioCyc:BANT261594:GJ7F-1807-MONOMER EvolutionaryTrace:Q81S73
Uniprot:Q81S73
Length = 247
Score = 97 (39.2 bits), Expect = 0.00013, P = 0.00013
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 4 VVLKGTNVDGVYDCHSRDNNAT--FEHISFRELGSRGAIPMDSTALSFCDENSIPVVVFN 61
+++ VDGV+ + N + + +++ ++ + MD AL + ++P VFN
Sbjct: 157 ILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQNIQVMDQAALLLARDYNLPAHVFN 216
Query: 62 LLEPGNISKAIC-GDQVGTFID 82
EPG + + IC G+ VGT I+
Sbjct: 217 FDEPG-VMRRICLGEHVGTLIN 237
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 88 88 0.00091 102 3 11 22 0.47 29
29 0.49 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 511 (54 KB)
Total size of DFA: 102 KB (2072 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.75u 0.08s 9.83t Elapsed: 00:00:13
Total cpu time: 9.75u 0.08s 9.83t Elapsed: 00:00:13
Start: Thu May 9 19:01:13 2013 End: Thu May 9 19:01:26 2013