BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035510
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A5UUV0|PYRH_ROSS1 Uridylate kinase OS=Roseiflexus sp. (strain RS-1) GN=pyrH PE=3 SV=2
Length = 243
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 1 HAEVVLKGTN-VDGVYDCHSR--DNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPV 57
HAEV+L N VDGVY R + FE+IS+ E SRG MDSTAL+FC +N+IP+
Sbjct: 154 HAEVILMAKNGVDGVYSADPRRYPDAKRFEYISYMEALSRGLTVMDSTALTFCMDNNIPI 213
Query: 58 VVFNLLEPGNISKAICGDQVGTFI 81
+VF+ L PGNI + + G+ VGT +
Sbjct: 214 IVFDPLTPGNIERIVMGEHVGTLV 237
>sp|Q7VD61|PYRH_PROMA Uridylate kinase OS=Prochlorococcus marinus (strain SARG / CCMP1375
/ SS120) GN=pyrH PE=3 SV=1
Length = 237
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 1 HAEVVLKGTNVDGVYDCHSRD--NNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
+A+V+ K T VDGVY+ ++ +E ++F+E+ S+ MDSTA++ C +N IP+V
Sbjct: 151 NADVIFKATKVDGVYNQDPKEYPEAIKYESLTFQEVLSKEIAVMDSTAIALCKDNKIPIV 210
Query: 59 VFNLLEPGNISKAICGDQVGTFIDRTG 85
VFN+ +PGNI+KA+ G+++G+ I +G
Sbjct: 211 VFNIFQPGNINKAVAGEKIGSRISNSG 237
>sp|Q47S51|PYRH_THEFY Uridylate kinase OS=Thermobifida fusca (strain YX) GN=pyrH PE=3
SV=1
Length = 252
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 2 AEVVLKGTNVDGVYDCHSRDNNAT--FEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A+ VLKGT VDGVYD R N A F+ + + E+ +RG MD+TA+S C +N +P+VV
Sbjct: 166 AQAVLKGTQVDGVYDSDPRKNPAAVRFDRLDYNEVLTRGLKVMDATAVSLCMDNGLPIVV 225
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
F+L+ GNI +A+ G+++GT +
Sbjct: 226 FDLMGKGNILRAVQGEKIGTIV 247
>sp|Q0I8L5|PYRH_SYNS3 Uridylate kinase OS=Synechococcus sp. (strain CC9311) GN=pyrH PE=3
SV=1
Length = 235
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 2 AEVVLKGTNVDGVYD--CHSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A+VV K T VDGVYD H + ++ ++F+++ S MDSTA++ C +N+IP+VV
Sbjct: 152 ADVVFKATKVDGVYDKDPHQFPDAVRYDSLTFQQVLSGELAVMDSTAIALCKDNNIPIVV 211
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
FNL EPGNI KA+ G+ +G+ I
Sbjct: 212 FNLFEPGNIGKAVAGEPIGSRI 233
>sp|Q46GQ4|PYRH_PROMT Uridylate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=pyrH
PE=3 SV=1
Length = 237
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 12/88 (13%)
Query: 1 HAEVVLKGTNVDGVYDCHSRD-------NNATFEHISFRELGSRGAIPMDSTALSFCDEN 53
+AEVV K T VDGVYD + +N TF+ + E+G MDSTA++ C +N
Sbjct: 151 NAEVVFKATKVDGVYDRDPKKFTDAVKYDNLTFQDVLANEIGV-----MDSTAIALCKDN 205
Query: 54 SIPVVVFNLLEPGNISKAICGDQVGTFI 81
IP+VVFN+ +PGNI+KAI G+ +G+ I
Sbjct: 206 KIPIVVFNIFQPGNIAKAISGEPIGSRI 233
>sp|A2C0Y1|PYRH_PROM1 Uridylate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=pyrH
PE=3 SV=1
Length = 237
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 12/88 (13%)
Query: 1 HAEVVLKGTNVDGVYDCHSRD-------NNATFEHISFRELGSRGAIPMDSTALSFCDEN 53
+AEVV K T VDGVYD + +N TF+ + E+G MDSTA++ C +N
Sbjct: 151 NAEVVFKATKVDGVYDRDPKKFTDAVKYDNLTFQDVLANEIGV-----MDSTAIALCKDN 205
Query: 54 SIPVVVFNLLEPGNISKAICGDQVGTFI 81
IP+VVFN+ +PGNI+KAI G+ +G+ I
Sbjct: 206 KIPIVVFNIFQPGNIAKAISGEPIGSRI 233
>sp|Q0AYK2|PYRH_SYNWW Uridylate kinase OS=Syntrophomonas wolfei subsp. wolfei (strain
Goettingen) GN=pyrH PE=3 SV=1
Length = 238
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 1 HAEVVLKGTNVDGVYDCHSRDNNAT--FEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
AEV+L VDGVYD N A F+ +++ ++ SRG MDSTA S C +N IP++
Sbjct: 154 EAEVILMAKKVDGVYDADPVKNPAALKFDRLNYIDVLSRGLGVMDSTAASLCMDNGIPII 213
Query: 59 VFNLLEPGNISKAICGDQVGTFIDR 83
VF+L GNI KA+ G+++GT++ R
Sbjct: 214 VFDLTREGNILKAVLGEEIGTYVGR 238
>sp|Q2JS42|PYRH_SYNJA Uridylate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pyrH
PE=3 SV=1
Length = 254
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 2 AEVVLKGTNVDGVYDCHSRDNNAT--FEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
AEV+ K T VDGVYD + + ++ +S++++ +R MDSTA++ C EN +P+VV
Sbjct: 153 AEVIFKATKVDGVYDADPKTHPQARRYDVLSYQDVLTRDLRVMDSTAIALCKENQLPIVV 212
Query: 60 FNLLEPGNISKAICGDQVGTFIDRT 84
F+L PGNI + + G+ +GT+I +T
Sbjct: 213 FDLTTPGNIYRVVQGEPIGTWIGQT 237
>sp|Q10Y48|PYRH_TRIEI Uridylate kinase OS=Trichodesmium erythraeum (strain IMS101)
GN=pyrH PE=3 SV=1
Length = 244
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYDC--HSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
AEV+ K T VDGVYD H +E +S+ E+ + MDSTA++ C EN+IP++
Sbjct: 153 EAEVIFKATKVDGVYDSDPHKNQEAKRYESLSYGEVLTLDLRVMDSTAIALCKENNIPII 212
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VFNL GNI KA+ G+++GT +
Sbjct: 213 VFNLSVSGNICKAVMGEKIGTIV 235
>sp|A3DE57|PYRH_CLOTH Uridylate kinase OS=Clostridium thermocellum (strain ATCC 27405 /
DSM 1237) GN=pyrH PE=3 SV=1
Length = 235
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 2 AEVVLKGTNVDGVYDC--HSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
AEV+L VDGVYD + N F+ +SF ++ ++G MDSTA S C +N+IP++V
Sbjct: 153 AEVILLAKKVDGVYDSDPNINPNAKKFDKLSFMDVINKGLGVMDSTAASLCKDNNIPIIV 212
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
F L EPGNI KA+ G+++GT +
Sbjct: 213 FGLNEPGNIVKAVMGEKIGTIV 234
>sp|Q1IV36|PYRH_KORVE Uridylate kinase OS=Koribacter versatilis (strain Ellin345) GN=pyrH
PE=3 SV=1
Length = 239
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 2 AEVVLKGTNVDGVYDC--HSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A+V++K T VDG+YD H + F I++ ++ +G MD+TA+S C EN +P+VV
Sbjct: 156 ADVIMKATKVDGIYDADPHKVADATMFAQITYMDVLKKGLRVMDATAISLCQENRLPIVV 215
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
FNL E GNI + + G+ VG+ +
Sbjct: 216 FNLNERGNIQRVVMGEAVGSLV 237
>sp|A8G3N7|PYRH_PROM2 Uridylate kinase OS=Prochlorococcus marinus (strain MIT 9215)
GN=pyrH PE=3 SV=1
Length = 234
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYDC--HSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
+AEVV+K T VDGVYDC + + + +S++ + S MDSTA++ C +N+IP++
Sbjct: 151 NAEVVMKATKVDGVYDCDPNQFKDAKKYSSLSYQRVLSDEIAVMDSTAIALCKDNNIPIM 210
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VF++ + GNISKA+ G+ +G+ I
Sbjct: 211 VFDIFKKGNISKAVAGEPIGSLI 233
>sp|Q31C12|PYRH_PROM9 Uridylate kinase OS=Prochlorococcus marinus (strain MIT 9312)
GN=pyrH PE=3 SV=1
Length = 234
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYDC--HSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
+AEVV+K T VDGVY+C + + + ++S++++ S MDSTA++ C +N+IP++
Sbjct: 151 NAEVVMKATKVDGVYNCDPNKFQDAKKYTNLSYQQVLSDEIAVMDSTAIALCKDNNIPIM 210
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VF++ + GNISKA+ G+ +G+ I
Sbjct: 211 VFDIFKKGNISKAVAGEAIGSLI 233
>sp|Q7V6C2|PYRH_PROMM Uridylate kinase OS=Prochlorococcus marinus (strain MIT 9313)
GN=pyrH PE=3 SV=1
Length = 237
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYDCH-SRDNNAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
+A+VV K T VDGVYD R +AT ++ ++F+++ S MDSTA++ C +N+IP+V
Sbjct: 151 NADVVFKATKVDGVYDRDPKRFPDATRYDSLTFQQVLSGELAVMDSTAIALCKDNNIPIV 210
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VF+L EPGNI KA+ G+ +G+ I
Sbjct: 211 VFDLFEPGNIGKAVAGEAIGSRI 233
>sp|Q3AV98|PYRH_SYNS9 Uridylate kinase OS=Synechococcus sp. (strain CC9902) GN=pyrH PE=3
SV=1
Length = 237
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYD--CHSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
+A+VV K T VDGVYD + +H+S++++ S MD+TA+S C EN+IP+V
Sbjct: 151 NADVVFKATKVDGVYDKDPAKHPDAVKHDHLSYQDVLSGELGVMDATAISLCKENNIPIV 210
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VF+L EPGNI KA+ G+ +G+ I
Sbjct: 211 VFDLFEPGNIGKAVAGEPIGSRI 233
>sp|A2C7Q3|PYRH_PROM3 Uridylate kinase OS=Prochlorococcus marinus (strain MIT 9303)
GN=pyrH PE=3 SV=1
Length = 237
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
+A+VV K T VDGVYD + + ++ ++F+++ S MDSTA++ C +N+IP+V
Sbjct: 151 NADVVFKATKVDGVYDRDPKRFPDAKRYDSLTFQQVLSGELAVMDSTAIALCKDNNIPIV 210
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VF+L EPGNI KA+ G+ +G+ I
Sbjct: 211 VFDLFEPGNIGKAVAGEAIGSRI 233
>sp|A3PBP6|PYRH_PROM0 Uridylate kinase OS=Prochlorococcus marinus (strain MIT 9301)
GN=pyrH PE=3 SV=1
Length = 234
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYDC--HSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
+AEVV+K T VDGVY+C + + + +S++++ S MDSTA++ C +N+IP++
Sbjct: 151 NAEVVMKATKVDGVYNCDPNKFKDAKKYSSLSYQQVLSDEIAVMDSTAIALCKDNNIPIM 210
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VF++ + GNISKA+ GD +G+ I
Sbjct: 211 VFDIFKKGNISKAVDGDPIGSLI 233
>sp|Q2IMM2|PYRH_ANADE Uridylate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-C)
GN=pyrH PE=3 SV=1
Length = 251
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 1 HAEVVLKGTNVDGVYDCHSRDNNAT--FEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
HA+V+LK T VDGVY + N A F+ +S+ ++ + MDSTA+S C +N +P+V
Sbjct: 161 HADVLLKATKVDGVYTDDPKKNPAATKFKQLSYIDVLKKNLKVMDSTAISLCMDNDLPIV 220
Query: 59 VFNLLEPGNISKAICGDQVGTFIDR 83
VF+L + GN+ K + G+++GT + R
Sbjct: 221 VFDLTQRGNVRKVVLGEEIGTTVGR 245
>sp|Q2JJE2|PYRH_SYNJB Uridylate kinase OS=Synechococcus sp. (strain JA-2-3B'a(2-13))
GN=pyrH PE=3 SV=1
Length = 253
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 2 AEVVLKGTNVDGVYDCHSRDNNAT--FEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
AEV+ K T VDGVYD + + ++ +S++++ +R MDSTA++ C EN +P+VV
Sbjct: 153 AEVIFKATKVDGVYDADPKTHPQARRYDVLSYQDVLNRDLRVMDSTAIALCKENQLPIVV 212
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
F+L PGNI + + G+ +GT+I
Sbjct: 213 FDLTTPGNIYRVVQGEPIGTWI 234
>sp|Q7MTP5|PYRH_PORGI Uridylate kinase OS=Porphyromonas gingivalis (strain ATCC BAA-308 /
W83) GN=pyrH PE=3 SV=1
Length = 239
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 1 HAEVVLKGTNVDGVYDCH-SRDNNAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
A+ +LKGT VDG+Y +D +AT F+ I++ E+ +RG MD TA + C EN++P+V
Sbjct: 152 EADAMLKGTRVDGIYTADPEKDPSATKFDRITYDEIYARGLKVMDLTATAMCMENNLPIV 211
Query: 59 VFNLLEPGNISKAICGDQVGTFIDRT 84
VF++ PGN+ K + G+++GT++ T
Sbjct: 212 VFDMDTPGNLLKVLRGEKIGTYVSNT 237
>sp|A5GJF0|PYRH_SYNPW Uridylate kinase OS=Synechococcus sp. (strain WH7803) GN=pyrH PE=3
SV=1
Length = 235
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 2 AEVVLKGTNVDGVYDC--HSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A+VV K T VDGVYD H + ++ ++F+++ S MDSTA++ C +N+IP+VV
Sbjct: 152 ADVVFKATKVDGVYDKDPHKYADAVRYDTLTFQQVLSGELAVMDSTAIALCKDNNIPIVV 211
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
FNL E GNI +A+ G+ +G+ I
Sbjct: 212 FNLFEAGNIGRAVAGEPIGSRI 233
>sp|Q7U5F5|PYRH_SYNPX Uridylate kinase OS=Synechococcus sp. (strain WH8102) GN=pyrH PE=3
SV=1
Length = 237
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYD--CHSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
+A+VV K T VDGVYD + H++++++ S MDSTA++ C +N+IP+V
Sbjct: 151 NADVVFKATKVDGVYDKDPAKHADAVKHAHLTYQDVLSGELAVMDSTAIALCKDNNIPIV 210
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VFNL EPGNI +A+ G+ +G+ I
Sbjct: 211 VFNLFEPGNIGRAVAGEPIGSRI 233
>sp|A0LV52|PYRH_ACIC1 Uridylate kinase OS=Acidothermus cellulolyticus (strain ATCC 43068
/ 11B) GN=pyrH PE=3 SV=1
Length = 266
Score = 75.5 bits (184), Expect = 9e-14, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 2 AEVVLKGTNVDGVYDCHSRDNN--ATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
AEVVL VDGVYD + N F+H+ + E+ +R D+TA+S C +N +P++V
Sbjct: 168 AEVVLMAKAVDGVYDSDPKTNADAVRFDHLDYDEVLARDLKFADATAISLCRDNGMPIIV 227
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
FNLLE GNI++A+ G+++GT +
Sbjct: 228 FNLLEEGNIARAVHGEKIGTIV 249
>sp|Q3ALP7|PYRH_SYNSC Uridylate kinase OS=Synechococcus sp. (strain CC9605) GN=pyrH PE=3
SV=1
Length = 237
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYDCHSRDNNATFEH--ISFRELGSRGAIPMDSTALSFCDENSIPVV 58
+A+VV K T VDGVYD + +H +S++++ S MDSTA++ C +N+IP+V
Sbjct: 151 NADVVFKATKVDGVYDKDPAKHADAVKHPQLSYQDVLSGELGVMDSTAIALCKDNNIPIV 210
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VFNL EPGNI +A+ G+ +G+ I
Sbjct: 211 VFNLFEPGNIGRAVAGEPIGSRI 233
>sp|Q7NI44|PYRH_GLOVI Uridylate kinase OS=Gloeobacter violaceus (strain PCC 7421) GN=pyrH
PE=3 SV=1
Length = 235
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 2 AEVVLKGTNVDGVYDCHSRDN--NATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A+V+ K T VDG+YD + N FE I+F E+ + MDSTA++ C EN+IP++V
Sbjct: 153 AQVIFKATRVDGIYDSDPKFNPQAVRFEKITFHEVLVQNLRVMDSTAIALCRENNIPILV 212
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
FN+ E +I +A+ G+ VGT++
Sbjct: 213 FNVFEKNSIYRAVQGEAVGTYV 234
>sp|Q6MGY5|PYRH_BDEBA Uridylate kinase OS=Bdellovibrio bacteriovorus (strain ATCC 15356 /
DSM 50701 / NCIB 9529 / HD100) GN=pyrH PE=3 SV=1
Length = 237
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYDC--HSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
+A+V++K T VDG+YD + F+ IS+ ++ +RG MDSTA+S C +N +P++
Sbjct: 154 NAQVIMKATKVDGIYDKDPAKHADAKKFDKISYIDVLNRGLQVMDSTAISMCMDNKLPII 213
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
F+L PGNI KA+ G+ +GT +
Sbjct: 214 TFDLTVPGNILKAVQGETIGTLV 236
>sp|Q11XK2|PYRH_CYTH3 Uridylate kinase OS=Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469) GN=pyrH PE=3 SV=1
Length = 235
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYDCH-SRDNNAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
AEVVLKGT VDGVY +D AT + I+F E ++G MD TA + C EN +P++
Sbjct: 151 EAEVVLKGTRVDGVYTADPEKDPTATRYTTITFDEAYAKGLNIMDMTAFTLCKENELPII 210
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
+F++ PGN+ K + G+ VGT +
Sbjct: 211 IFDMNRPGNLLKVLEGESVGTLV 233
>sp|Q3AB79|PYRH_CARHZ Uridylate kinase OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=pyrH PE=3 SV=1
Length = 242
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYDCHSRDN-NA-TFEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
AEV+L VDGVYD N NA F+ + + E+ +RG MDSTA S C +N+IP++
Sbjct: 155 EAEVILMAKRVDGVYDSDPLKNPNAQKFDELEYIEVLNRGLGVMDSTATSLCMDNNIPLI 214
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VFNL PGNI + I G+ +GT +
Sbjct: 215 VFNLEVPGNIKRVILGENIGTIV 237
>sp|A2BVI4|PYRH_PROM5 Uridylate kinase OS=Prochlorococcus marinus (strain MIT 9515)
GN=pyrH PE=3 SV=1
Length = 234
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 58/86 (67%), Gaps = 8/86 (9%)
Query: 1 HAEVVLKGTNVDGVYDCHSRDNNA-----TFEHISFRELGSRGAIPMDSTALSFCDENSI 55
+AEVV+K T VDGVYD RD N + +S++++ S MDSTA++ C +N+I
Sbjct: 151 NAEVVMKATKVDGVYD---RDPNKFNEAKKYSSLSYQQVLSDEIAVMDSTAIALCKDNNI 207
Query: 56 PVVVFNLLEPGNISKAICGDQVGTFI 81
P++VF++ + GNIS+A+ G+ +G+ I
Sbjct: 208 PIMVFDIFKKGNISRAVAGESIGSLI 233
>sp|Q3A397|PYRH_PELCD Uridylate kinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra
Bd 1) GN=pyrH PE=3 SV=1
Length = 241
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 2 AEVVLKGTNVDGVYDCHS-RDNNAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A+V+LK T VDGVY +D NA F+++ + ++ +G MD+TA S C +N +P+VV
Sbjct: 157 ADVILKATKVDGVYSADPCKDKNAVKFDNLKYLDVLKKGLKVMDATATSLCMDNDLPIVV 216
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
F L PGNI K + G+ +GT +
Sbjct: 217 FQLSRPGNIKKVVLGEAIGTIV 238
>sp|A6QGF8|PYRH_STAAE Uridylate kinase OS=Staphylococcus aureus (strain Newman) GN=pyrH
PE=3 SV=2
Length = 240
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 1 HAEVVLKGTN-VDGVYDCHSRDNN--ATFEHISFRELGSRGAIPMDSTALSFCDENSIPV 57
A+V+L G N VDGVY + N +EH++ ++ G MDSTA SFC +N+IP+
Sbjct: 155 EADVILMGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPL 214
Query: 58 VVFNLLEPGNISKAICGDQVGTFIDR 83
VF+++E GNI +A+ G+++GT I +
Sbjct: 215 TVFSIMEEGNIKRAVMGEKIGTLITK 240
>sp|Q74BW2|PYRH_GEOSL Uridylate kinase OS=Geobacter sulfurreducens (strain ATCC 51573 /
DSM 12127 / PCA) GN=pyrH PE=3 SV=1
Length = 239
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 2 AEVVLKGTNVDGVYDCHSRDNNATFEH--ISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A+V+LKGT VDGVY + + ++ +++ E+ +G MD+TA S C +N++P++V
Sbjct: 155 ADVILKGTKVDGVYSADPKKDPTAIKYPRLTYLEVLKKGLQVMDATATSLCMDNNLPIIV 214
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
F++ GNI K +CG+++GT +
Sbjct: 215 FDITTYGNIKKVVCGEEIGTIV 236
>sp|A2BQ03|PYRH_PROMS Uridylate kinase OS=Prochlorococcus marinus (strain AS9601) GN=pyrH
PE=3 SV=1
Length = 234
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 58/86 (67%), Gaps = 8/86 (9%)
Query: 1 HAEVVLKGTNVDGVYDCHSRDNN-----ATFEHISFRELGSRGAIPMDSTALSFCDENSI 55
+AEVV+K T VDGVYD RD N + +S++++ S MDSTA++ C +N+I
Sbjct: 151 NAEVVMKATKVDGVYD---RDPNQFKEAKKYSSLSYQQVLSDEIAVMDSTAIALCKDNNI 207
Query: 56 PVVVFNLLEPGNISKAICGDQVGTFI 81
P++VF++ + GNIS+A+ G+ +G+ I
Sbjct: 208 PIMVFDIFKKGNISRAVAGEPIGSLI 233
>sp|P65937|PYRH_STAAW Uridylate kinase OS=Staphylococcus aureus (strain MW2) GN=pyrH PE=3
SV=1
Length = 240
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 1 HAEVVLKGTN-VDGVYDCHSRDNN--ATFEHISFRELGSRGAIPMDSTALSFCDENSIPV 57
A+V+L G N VDGVY + N +EH++ ++ G MDSTA SFC +N+IP+
Sbjct: 155 EADVILMGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPL 214
Query: 58 VVFNLLEPGNISKAICGDQVGTFIDR 83
VF+++E GNI +A+ G+++GT I +
Sbjct: 215 TVFSIMEEGNIKRAVMGEKIGTLITK 240
>sp|Q6G9V5|PYRH_STAAS Uridylate kinase OS=Staphylococcus aureus (strain MSSA476) GN=pyrH
PE=3 SV=1
Length = 240
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 1 HAEVVLKGTN-VDGVYDCHSRDNN--ATFEHISFRELGSRGAIPMDSTALSFCDENSIPV 57
A+V+L G N VDGVY + N +EH++ ++ G MDSTA SFC +N+IP+
Sbjct: 155 EADVILMGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPL 214
Query: 58 VVFNLLEPGNISKAICGDQVGTFIDR 83
VF+++E GNI +A+ G+++GT I +
Sbjct: 215 TVFSIMEEGNIKRAVMGEKIGTLITK 240
>sp|Q6GHH7|PYRH_STAAR Uridylate kinase OS=Staphylococcus aureus (strain MRSA252) GN=pyrH
PE=3 SV=1
Length = 240
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 1 HAEVVLKGTN-VDGVYDCHSRDNN--ATFEHISFRELGSRGAIPMDSTALSFCDENSIPV 57
A+V+L G N VDGVY + N +EH++ ++ G MDSTA SFC +N+IP+
Sbjct: 155 EADVILMGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPL 214
Query: 58 VVFNLLEPGNISKAICGDQVGTFIDR 83
VF+++E GNI +A+ G+++GT I +
Sbjct: 215 TVFSIMEEGNIKRAVMGEKIGTLITK 240
>sp|P65936|PYRH_STAAN Uridylate kinase OS=Staphylococcus aureus (strain N315) GN=pyrH
PE=1 SV=1
Length = 240
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 1 HAEVVLKGTN-VDGVYDCHSRDNN--ATFEHISFRELGSRGAIPMDSTALSFCDENSIPV 57
A+V+L G N VDGVY + N +EH++ ++ G MDSTA SFC +N+IP+
Sbjct: 155 EADVILMGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPL 214
Query: 58 VVFNLLEPGNISKAICGDQVGTFIDR 83
VF+++E GNI +A+ G+++GT I +
Sbjct: 215 TVFSIMEEGNIKRAVMGEKIGTLITK 240
>sp|P65935|PYRH_STAAM Uridylate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=pyrH PE=1 SV=1
Length = 240
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 1 HAEVVLKGTN-VDGVYDCHSRDNN--ATFEHISFRELGSRGAIPMDSTALSFCDENSIPV 57
A+V+L G N VDGVY + N +EH++ ++ G MDSTA SFC +N+IP+
Sbjct: 155 EADVILMGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPL 214
Query: 58 VVFNLLEPGNISKAICGDQVGTFIDR 83
VF+++E GNI +A+ G+++GT I +
Sbjct: 215 TVFSIMEEGNIKRAVMGEKIGTLITK 240
>sp|Q5HGH3|PYRH_STAAC Uridylate kinase OS=Staphylococcus aureus (strain COL) GN=pyrH PE=3
SV=1
Length = 240
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 1 HAEVVLKGTN-VDGVYDCHSRDNN--ATFEHISFRELGSRGAIPMDSTALSFCDENSIPV 57
A+V+L G N VDGVY + N +EH++ ++ G MDSTA SFC +N+IP+
Sbjct: 155 EADVILMGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPL 214
Query: 58 VVFNLLEPGNISKAICGDQVGTFIDR 83
VF+++E GNI +A+ G+++GT I +
Sbjct: 215 TVFSIMEEGNIKRAVMGEKIGTLITK 240
>sp|Q2YXL0|PYRH_STAAB Uridylate kinase OS=Staphylococcus aureus (strain bovine RF122 /
ET3-1) GN=pyrH PE=3 SV=1
Length = 240
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 1 HAEVVLKGTN-VDGVYDCHSRDNN--ATFEHISFRELGSRGAIPMDSTALSFCDENSIPV 57
A+V+L G N VDGVY + N +EH++ ++ G MDSTA SFC +N+IP+
Sbjct: 155 EADVILMGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPL 214
Query: 58 VVFNLLEPGNISKAICGDQVGTFIDR 83
VF+++E GNI +A+ G+++GT I +
Sbjct: 215 TVFSIMEEGNIKRAVMGEKIGTLITK 240
>sp|Q2FZ22|PYRH_STAA8 Uridylate kinase OS=Staphylococcus aureus (strain NCTC 8325)
GN=pyrH PE=1 SV=1
Length = 240
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 1 HAEVVLKGTN-VDGVYDCHSRDNN--ATFEHISFRELGSRGAIPMDSTALSFCDENSIPV 57
A+V+L G N VDGVY + N +EH++ ++ G MDSTA SFC +N+IP+
Sbjct: 155 EADVILMGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPL 214
Query: 58 VVFNLLEPGNISKAICGDQVGTFIDR 83
VF+++E GNI +A+ G+++GT I +
Sbjct: 215 TVFSIMEEGNIKRAVMGEKIGTLITK 240
>sp|Q2FHI0|PYRH_STAA3 Uridylate kinase OS=Staphylococcus aureus (strain USA300) GN=pyrH
PE=3 SV=1
Length = 240
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 1 HAEVVLKGTN-VDGVYDCHSRDNN--ATFEHISFRELGSRGAIPMDSTALSFCDENSIPV 57
A+V+L G N VDGVY + N +EH++ ++ G MDSTA SFC +N+IP+
Sbjct: 155 EADVILMGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPL 214
Query: 58 VVFNLLEPGNISKAICGDQVGTFIDR 83
VF+++E GNI +A+ G+++GT I +
Sbjct: 215 TVFSIMEEGNIKRAVMGEKIGTLITK 240
>sp|A7X1N6|PYRH_STAA1 Uridylate kinase OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=pyrH PE=3 SV=1
Length = 240
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 1 HAEVVLKGTN-VDGVYDCHSRDNN--ATFEHISFRELGSRGAIPMDSTALSFCDENSIPV 57
A+V+L G N VDGVY + N +EH++ ++ G MDSTA SFC +N+IP+
Sbjct: 155 EADVILMGKNNVDGVYSADPKVNKDAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPL 214
Query: 58 VVFNLLEPGNISKAICGDQVGTFIDR 83
VF+++E GNI +A+ G+++GT I +
Sbjct: 215 TVFSIMEEGNIKRAVMGEKIGTLITK 240
>sp|Q4L5W0|PYRH_STAHJ Uridylate kinase OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=pyrH PE=3 SV=1
Length = 240
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 1 HAEVVLKGTN-VDGVYDCHSR-DNNAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPV 57
A+V+L G N VDGVY + D NA +EH++ ++ G MDSTA SFC +N+IP+
Sbjct: 155 EADVILMGKNNVDGVYSADPKVDKNAVKYEHLTHIQMLQEGLQVMDSTASSFCMDNNIPL 214
Query: 58 VVFNLLEPGNISKAICGDQVGTFIDR 83
VF+++E GNI +A+ G+++GT I +
Sbjct: 215 NVFSIMEEGNIKRAVMGEKIGTLITK 240
>sp|Q7V2F8|PYRH_PROMP Uridylate kinase OS=Prochlorococcus marinus subsp. pastoris (strain
CCMP1986 / MED4) GN=pyrH PE=3 SV=1
Length = 234
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 58/86 (67%), Gaps = 8/86 (9%)
Query: 1 HAEVVLKGTNVDGVYDCHSRDNNA-----TFEHISFRELGSRGAIPMDSTALSFCDENSI 55
+AEVV+K T VDGVYD RD N + ++++++ S MDSTA++ C +N+I
Sbjct: 151 NAEVVMKATKVDGVYD---RDPNKFKEAKKYSSLTYQQVLSDEIAVMDSTAIALCKDNNI 207
Query: 56 PVVVFNLLEPGNISKAICGDQVGTFI 81
P++VF++ + GNIS+A+ G+ +G+ I
Sbjct: 208 PIMVFDIFKKGNISRAVAGESIGSLI 233
>sp|Q895L0|PYRH_CLOTE Uridylate kinase OS=Clostridium tetani (strain Massachusetts / E88)
GN=pyrH PE=3 SV=1
Length = 237
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYDC--HSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
A+++L VDGVYD H + FE +++ ++ +G MDSTA S C +N+IP++
Sbjct: 152 EADIILLAKKVDGVYDKDPHKHEKAQKFETLTYIDVLDQGLQVMDSTATSLCMDNNIPIL 211
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VF L PGNI KAI G+++GT +
Sbjct: 212 VFALDAPGNIRKAISGEKIGTIV 234
>sp|Q39W86|PYRH_GEOMG Uridylate kinase OS=Geobacter metallireducens (strain GS-15 / ATCC
53774 / DSM 7210) GN=pyrH PE=3 SV=1
Length = 239
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 2 AEVVLKGTNVDGVYDCHSRDNNAT--FEHISFRELGSRGAIPMDSTALSFCDENSIPVVV 59
A+V+LKGT VDGVY + + + +++ E+ +G MD+TA S C +N++P++V
Sbjct: 155 ADVILKGTKVDGVYSADPKKDPTAQKYPRLTYLEVLKKGLQVMDATATSLCMDNNLPIIV 214
Query: 60 FNLLEPGNISKAICGDQVGTFI 81
F++ GNI K +CG+++GT +
Sbjct: 215 FDITTYGNIKKVVCGEEIGTVV 236
>sp|A5GSA3|PYRH_SYNR3 Uridylate kinase OS=Synechococcus sp. (strain RCC307) GN=pyrH PE=3
SV=1
Length = 237
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYDCHS-RDNNAT-FEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
+A VVLK T VDGVYD R +A +EH++F+++ + MD+TA++ C +N+IP+V
Sbjct: 151 NAHVVLKATKVDGVYDKDPVRFPDAVRYEHLTFQDVLANELGVMDATAIALCKDNTIPIV 210
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VF+L GNIS+A+ G+ +GT I
Sbjct: 211 VFDLFGSGNISRAVAGEPIGTRI 233
>sp|Q6NGK6|PYRH_CORDI Uridylate kinase OS=Corynebacterium diphtheriae (strain ATCC 700971
/ NCTC 13129 / Biotype gravis) GN=pyrH PE=3 SV=2
Length = 243
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 3 EVVLKGTNVDGVYDCHSRDN--NATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVF 60
EV+L VDGVYD R N F I+ RE+ +G D+TA S C +N +P++VF
Sbjct: 161 EVLLMAKAVDGVYDDDPRTNPDAQLFHQITPREVIEKGLKVADATAFSLCMDNKMPILVF 220
Query: 61 NLLEPGNISKAICGDQVGTFID 82
NLL GNI++A+ G+Q+GT +
Sbjct: 221 NLLTEGNIARAVAGEQIGTLVQ 242
>sp|A5I4L0|PYRH_CLOBH Uridylate kinase OS=Clostridium botulinum (strain Hall / ATCC 3502
/ NCTC 13319 / Type A) GN=pyrH PE=3 SV=1
Length = 238
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 1 HAEVVLKGTNVDGVYDC--HSRDNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVV 58
A+V+L VDGVYD H D+ + +S+ E+ +G MDSTA S C +N IP++
Sbjct: 152 EADVILLAKKVDGVYDKDPHKYDDAKKYNKLSYIEVLEQGLQVMDSTATSLCMDNDIPIL 211
Query: 59 VFNLLEPGNISKAICGDQVGTFI 81
VF L EP NI KA+ G+++GT +
Sbjct: 212 VFGLDEPCNIIKAVTGEEIGTLV 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,972,379
Number of Sequences: 539616
Number of extensions: 1159361
Number of successful extensions: 3272
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 2408
Number of HSP's gapped (non-prelim): 521
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)