Query 035510
Match_columns 88
No_of_seqs 133 out of 1153
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 05:15:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035510.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035510hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ek6_A Uridylate kinase; UMPK 99.9 2.7E-23 9.3E-28 143.4 8.6 83 1-83 157-241 (243)
2 1ybd_A Uridylate kinase; alpha 99.9 4.6E-23 1.6E-27 140.9 8.6 83 1-83 155-239 (239)
3 2jjx_A Uridylate kinase, UMP k 99.9 9.5E-23 3.2E-27 141.1 9.7 86 1-86 161-249 (255)
4 2a1f_A Uridylate kinase; PYRH, 99.9 1E-22 3.5E-27 140.2 8.6 83 1-83 156-240 (247)
5 3nwy_A Uridylate kinase; allos 99.9 2.5E-22 8.6E-27 141.5 9.2 82 1-82 197-280 (281)
6 1z9d_A Uridylate kinase, UK, U 99.9 3.6E-22 1.2E-26 137.9 9.7 84 1-84 155-241 (252)
7 4a7w_A Uridylate kinase; trans 99.9 4.8E-22 1.6E-26 136.9 9.4 82 1-82 156-240 (240)
8 2j4j_A Uridylate kinase; trans 99.9 7.2E-22 2.5E-26 134.2 8.0 83 1-83 131-225 (226)
9 2va1_A Uridylate kinase; UMPK, 99.9 1.5E-21 5E-26 135.3 8.9 83 1-83 171-256 (256)
10 2brx_A Uridylate kinase; UMP k 99.8 2.6E-21 8.9E-26 133.2 5.8 83 1-83 151-244 (244)
11 2j5v_A Glutamate 5-kinase; pro 99.8 9.3E-21 3.2E-25 137.4 7.2 84 1-84 161-258 (367)
12 2ij9_A Uridylate kinase; struc 99.8 1.7E-20 5.9E-25 126.8 7.6 81 1-82 128-219 (219)
13 2ogx_A Molybdenum storage prot 99.8 6E-20 2.1E-24 128.6 9.5 86 1-86 182-274 (276)
14 2ako_A Glutamate 5-kinase; str 99.8 3E-20 1E-24 127.9 6.7 82 1-82 154-251 (251)
15 2rd5_A Acetylglutamate kinase- 99.8 1.7E-18 5.9E-23 122.0 10.2 82 1-83 208-298 (298)
16 2ap9_A NAG kinase, acetylgluta 99.8 1.9E-18 6.4E-23 121.8 9.4 84 1-85 202-292 (299)
17 2ogx_B Molybdenum storage prot 99.8 4.6E-18 1.6E-22 118.5 10.0 83 1-83 181-269 (270)
18 3ll9_A Isopentenyl phosphate k 99.8 1.5E-18 5.2E-23 121.1 7.5 82 1-82 172-266 (269)
19 3tvi_A Aspartokinase; structur 99.8 9E-19 3.1E-23 129.8 6.6 76 1-85 200-280 (446)
20 2v5h_A Acetylglutamate kinase; 99.8 5.9E-18 2E-22 120.7 10.1 83 1-84 220-311 (321)
21 2egx_A Putative acetylglutamat 99.7 6.7E-18 2.3E-22 117.5 7.6 79 1-82 183-269 (269)
22 2cdq_A Aspartokinase; aspartat 99.7 5.1E-18 1.8E-22 127.4 7.4 75 1-84 245-324 (510)
23 3d40_A FOMA protein; fosfomyci 99.7 3.5E-18 1.2E-22 120.1 5.4 83 1-84 182-283 (286)
24 3ab4_A Aspartokinase; aspartat 99.7 3.1E-17 1.1E-21 120.3 9.0 74 1-84 166-244 (421)
25 2j0w_A Lysine-sensitive aspart 99.7 1.8E-17 6.1E-22 122.8 7.4 75 1-84 213-292 (449)
26 3c1m_A Probable aspartokinase; 99.7 3.9E-17 1.3E-21 121.4 7.7 76 1-85 222-302 (473)
27 3l76_A Aspartokinase; alloster 99.7 4.4E-17 1.5E-21 124.1 8.1 75 1-85 167-246 (600)
28 3ll5_A Gamma-glutamyl kinase r 99.7 2.4E-17 8.3E-22 113.8 5.9 80 1-82 159-249 (249)
29 2bty_A Acetylglutamate kinase; 99.6 6.9E-16 2.4E-20 107.8 8.6 79 1-84 193-280 (282)
30 2buf_A Acetylglutamate kinase; 99.6 1.2E-15 4.1E-20 107.6 9.2 82 1-86 209-299 (300)
31 2e9y_A Carbamate kinase; trans 99.6 7.5E-16 2.6E-20 109.5 7.2 78 1-83 228-315 (316)
32 1e19_A Carbamate kinase-like c 99.6 2.1E-15 7.3E-20 107.1 8.4 79 1-83 227-314 (314)
33 2we5_A Carbamate kinase 1; arg 99.6 7.4E-16 2.5E-20 109.1 5.8 78 1-82 221-309 (310)
34 1gs5_A Acetylglutamate kinase; 99.6 2.9E-15 9.8E-20 103.4 7.6 78 1-83 173-258 (258)
35 3d2m_A Putative acetylglutamat 99.5 2.9E-14 9.9E-19 104.7 8.6 83 1-87 218-307 (456)
36 3kzf_A Carbamate kinase; argin 99.5 2E-14 6.9E-19 102.7 6.6 79 1-84 229-317 (317)
37 3k4o_A Isopentenyl phosphate k 99.5 3.7E-14 1.3E-18 98.8 6.8 76 1-84 177-265 (266)
38 4axs_A Carbamate kinase; oxido 99.5 2.3E-13 7.9E-18 97.7 8.6 79 1-83 244-332 (332)
39 3zzh_A Acetylglutamate kinase; 99.3 9.5E-12 3.2E-16 88.5 6.8 81 1-87 213-305 (307)
40 3s6g_A N-acetylglutamate kinas 99.1 6.1E-11 2.1E-15 88.2 5.7 82 1-86 223-313 (460)
41 3l86_A Acetylglutamate kinase; 99.1 1.3E-10 4.6E-15 81.6 6.6 66 1-83 205-278 (279)
42 4ab7_A Protein Arg5,6, mitocho 99.1 3.9E-10 1.3E-14 84.0 7.5 78 1-84 213-302 (464)
43 3s6k_A Acetylglutamate kinase; 99.0 1.1E-10 3.6E-15 87.1 1.5 82 1-86 226-316 (467)
44 3ewi_A N-acylneuraminate cytid 93.1 0.19 6.5E-06 32.0 5.1 56 6-73 11-69 (168)
45 1k1e_A Deoxy-D-mannose-octulos 89.1 0.78 2.7E-05 28.7 4.9 58 6-73 10-70 (180)
46 2p9j_A Hypothetical protein AQ 86.6 1.5 5.1E-05 26.5 4.9 12 6-17 11-22 (162)
47 2r8e_A 3-deoxy-D-manno-octulos 80.5 3.6 0.00012 25.7 5.0 27 46-72 61-87 (188)
48 3n1u_A Hydrolase, HAD superfam 77.6 8.5 0.00029 24.2 6.1 28 46-73 54-81 (191)
49 3mmz_A Putative HAD family hyd 77.2 8.6 0.00029 23.7 6.0 55 8-72 16-73 (176)
50 3mn1_A Probable YRBI family ph 76.6 5 0.00017 25.2 4.8 28 46-73 54-81 (189)
51 3e8m_A Acylneuraminate cytidyl 73.4 6.7 0.00023 23.5 4.6 28 46-73 39-66 (164)
52 3n07_A 3-deoxy-D-manno-octulos 71.0 11 0.00039 23.9 5.5 31 43-73 57-87 (195)
53 3ij5_A 3-deoxy-D-manno-octulos 62.5 15 0.0005 23.7 4.7 28 46-73 84-111 (211)
54 1qv9_A F420-dependent methylen 52.3 19 0.00066 24.9 4.0 44 44-87 81-124 (283)
55 3f9r_A Phosphomannomutase; try 44.9 22 0.00075 23.3 3.4 29 45-73 28-56 (246)
56 1xvi_A MPGP, YEDP, putative ma 44.6 24 0.00082 23.2 3.6 30 44-73 32-61 (275)
57 3fzq_A Putative hydrolase; YP_ 40.4 43 0.0015 21.3 4.3 29 45-73 29-57 (274)
58 1rkq_A Hypothetical protein YI 40.0 32 0.0011 22.6 3.6 29 45-73 29-57 (282)
59 1l6r_A Hypothetical protein TA 39.9 25 0.00085 22.6 3.0 29 45-73 29-57 (227)
60 2obb_A Hypothetical protein; s 38.0 28 0.00097 21.4 2.9 12 6-17 5-16 (142)
61 2pr7_A Haloacid dehalogenase/e 36.8 45 0.0016 18.5 3.6 24 47-70 27-50 (137)
62 1wr8_A Phosphoglycolate phosph 34.5 39 0.0013 21.4 3.3 28 45-72 27-54 (231)
63 1rlm_A Phosphatase; HAD family 34.1 23 0.00079 23.1 2.2 29 45-73 28-56 (271)
64 3pgv_A Haloacid dehalogenase-l 33.1 49 0.0017 21.6 3.7 28 45-72 45-72 (285)
65 2b30_A Pvivax hypothetical pro 31.8 32 0.0011 23.1 2.6 28 45-72 52-79 (301)
66 3sho_A Transcriptional regulat 31.5 81 0.0028 19.1 4.4 28 44-71 104-131 (187)
67 2pju_A Propionate catabolism o 31.4 42 0.0014 22.2 3.1 35 37-73 153-189 (225)
68 2zos_A MPGP, mannosyl-3-phosph 31.3 31 0.0011 22.2 2.4 28 45-72 24-51 (249)
69 2xhz_A KDSD, YRBH, arabinose 5 31.2 79 0.0027 19.1 4.3 28 44-71 113-140 (183)
70 3pdw_A Uncharacterized hydrola 29.9 63 0.0022 20.6 3.8 29 44-72 28-59 (266)
71 4dw8_A Haloacid dehalogenase-l 29.8 50 0.0017 21.2 3.3 29 45-73 29-57 (279)
72 3qgm_A P-nitrophenyl phosphata 29.7 55 0.0019 20.8 3.5 28 45-72 31-61 (268)
73 1nrw_A Hypothetical protein, h 28.8 54 0.0019 21.4 3.3 29 45-73 28-56 (288)
74 3dao_A Putative phosphatse; st 28.6 51 0.0018 21.5 3.2 30 44-73 45-74 (283)
75 2pq0_A Hypothetical conserved 28.3 62 0.0021 20.6 3.5 28 45-72 27-54 (258)
76 1x92_A APC5045, phosphoheptose 28.1 72 0.0025 19.7 3.7 29 44-72 130-158 (199)
77 4fe3_A Cytosolic 5'-nucleotida 28.1 34 0.0012 22.7 2.2 30 44-73 147-176 (297)
78 2xbl_A Phosphoheptose isomeras 26.5 92 0.0031 19.0 4.0 28 44-71 133-160 (198)
79 3r4c_A Hydrolase, haloacid deh 26.3 96 0.0033 19.7 4.1 24 45-68 37-60 (268)
80 1u02_A Trehalose-6-phosphate p 25.7 41 0.0014 21.6 2.2 29 44-73 29-57 (239)
81 3mpo_A Predicted hydrolase of 25.3 69 0.0023 20.5 3.3 29 45-73 29-57 (279)
82 1sc3_B Interleukin-1 beta conv 24.5 39 0.0013 19.0 1.7 16 1-16 8-23 (88)
83 1m3s_A Hypothetical protein YC 24.5 1.1E+02 0.0038 18.5 4.1 28 44-71 96-123 (186)
84 2wm8_A MDP-1, magnesium-depend 24.5 60 0.002 19.7 2.8 29 45-73 75-104 (187)
85 2yva_A DNAA initiator-associat 24.5 74 0.0025 19.5 3.2 28 44-71 126-153 (196)
86 2q5c_A NTRC family transcripti 24.2 85 0.0029 20.0 3.5 35 37-72 141-177 (196)
87 3epr_A Hydrolase, haloacid deh 23.0 64 0.0022 20.7 2.8 29 45-73 28-59 (264)
88 3dnp_A Stress response protein 22.9 59 0.002 21.0 2.6 29 45-73 30-58 (290)
89 1vim_A Hypothetical protein AF 22.7 89 0.003 19.5 3.4 28 44-71 106-133 (200)
90 2ql9_B Caspase-7; cysteine pro 22.6 44 0.0015 18.9 1.7 20 1-20 10-30 (97)
91 1nf2_A Phosphatase; structural 22.3 72 0.0025 20.6 3.0 27 45-72 26-52 (268)
92 1o13_A Probable NIFB protein; 22.1 53 0.0018 19.7 2.1 17 43-59 86-102 (136)
93 1pyo_B Caspase-2; apoptosis, c 21.7 46 0.0016 19.2 1.7 20 1-20 14-34 (105)
94 3trj_A Phosphoheptose isomeras 21.5 88 0.003 19.7 3.2 40 44-84 131-170 (201)
95 1tk9_A Phosphoheptose isomeras 21.3 84 0.0029 19.0 3.0 28 44-71 127-154 (188)
96 1l7l_A PA-I galactophilic lect 20.6 37 0.0013 20.5 1.1 16 3-18 93-108 (121)
97 2dko_B Caspase-3; low barrier 20.6 51 0.0018 19.0 1.7 16 1-16 16-31 (103)
98 3rjm_B Caspase-2; caspase-2, c 20.4 48 0.0016 19.7 1.6 16 1-16 15-30 (117)
99 1xpj_A Hypothetical protein; s 20.3 1.2E+02 0.0039 17.5 3.3 23 44-66 30-52 (126)
100 2rbk_A Putative uncharacterize 20.3 56 0.0019 20.9 2.1 26 45-71 27-52 (261)
No 1
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=99.89 E-value=2.7e-23 Score=143.45 Aligned_cols=83 Identities=29% Similarity=0.646 Sum_probs=79.0
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhhCCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCCCce
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGDQVG 78 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~~~G 78 (88)
+||.|+++|||||||++||+ |+|++|++++++|+.+.+.++||+.|+++|.++|++++|+|+++|+++.+++.|+.+|
T Consensus 157 ~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~g~~~~~~~a~~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~G 236 (243)
T 3ek6_A 157 GADLLLKATKVDGVYDKDPKKHSDAVRYDSLTYDEVIMQGLEVMDTAAFALARDSDLPLRIFGMSEPGVLLRILHGAQIG 236 (243)
T ss_dssp TCSEEEEECSSSSCBSSCGGGCTTCCBCSEECHHHHHHHTCCSSCHHHHHHHHHTTCCEEEECCCSTTHHHHHHTTCCCS
T ss_pred CCCEEEEEeCCCccCCCCCCCCCCceecccccHHHHHhCCchhHHHHHHHHHHHCCCeEEEEcCCCccHHHHHHCCCCCc
Confidence 69999999999999999998 8999999999998877778899999999999999999999999999999999999999
Q ss_pred eEEec
Q 035510 79 TFIDR 83 (88)
Q Consensus 79 T~i~~ 83 (88)
|+|.+
T Consensus 237 T~i~~ 241 (243)
T 3ek6_A 237 TLVQG 241 (243)
T ss_dssp EEECC
T ss_pred eEEee
Confidence 99987
No 2
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=99.89 E-value=4.6e-23 Score=140.87 Aligned_cols=83 Identities=34% Similarity=0.652 Sum_probs=78.7
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhhCCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCCCce
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGDQVG 78 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~~~G 78 (88)
+||.|+++|||||||++||+ |++++|++++++|+.+.|.++||++|+++|.++|++++|+|+++|+++.+++.|+..|
T Consensus 155 ~Ad~liilTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~g~~~m~~~a~~~a~~~gv~v~I~~~~~~~~l~~~l~g~~~G 234 (239)
T 1ybd_A 155 NCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGIAKEGSLKRVITGEDEG 234 (239)
T ss_dssp TCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHHHTTCCSSCHHHHHHHHHTTCCEEEECTTSTTHHHHHHHTCSCS
T ss_pred CCCEEEEeeCCCccCCCCCCCCCCCeEccccCHHHHHHhcccccCHHHHHHHHHcCCcEEEEeCCChhHHHHHHcCCCCC
Confidence 58999999999999999999 8999999999998877788899999999999999999999999999999999999899
Q ss_pred eEEec
Q 035510 79 TFIDR 83 (88)
Q Consensus 79 T~i~~ 83 (88)
|+|.+
T Consensus 235 T~i~~ 239 (239)
T 1ybd_A 235 TLVHC 239 (239)
T ss_dssp EEEEC
T ss_pred eEEcC
Confidence 99975
No 3
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=99.88 E-value=9.5e-23 Score=141.11 Aligned_cols=86 Identities=24% Similarity=0.542 Sum_probs=80.7
Q ss_pred CCcEEEEee-ccCeecCCCCC--CCceeeeccCHHHHhhCCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCCCc
Q 035510 1 HAEVVLKGT-NVDGVYDCHSR--DNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGDQV 77 (88)
Q Consensus 1 ~ad~li~~t-dVdGvy~~dP~--~~a~~i~~i~~~e~~~~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~~~ 77 (88)
+||.|+++| ||||||++||+ |++++|++++++|+.+.|.++||++|+++|.++|++++|+|+++|+++.+++.|+..
T Consensus 161 ~Ad~liilT~DVdGVy~~dP~~~p~a~~i~~is~~e~~~~G~~~m~~~a~~~a~~~gi~v~I~~~~~~~~l~~~l~g~~~ 240 (255)
T 2jjx_A 161 NSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQNIQVMDQAALLLARDYNLPAHVFNFDEPGVMRRICLGEHV 240 (255)
T ss_dssp TCSEEEEEESSCCSCBSSCTTTCSSCCBCSEEEHHHHHHTTCCSSCHHHHHHHHHHTCCEEEEETTSTTHHHHHHBTCCC
T ss_pred CCCEEEEEeCCcCeeECCCCCCCCCCeEeeEecHHHHHHcCCccCHHHHHHHHHHcCCeEEEEeCCCchHHHHHhcCCCC
Confidence 589999999 99999999998 889999999999988888899999999999999999999999999999999999889
Q ss_pred eeEEecCCC
Q 035510 78 GTFIDRTGR 86 (88)
Q Consensus 78 GT~i~~~~~ 86 (88)
||+|.++.+
T Consensus 241 GT~I~~~~~ 249 (255)
T 2jjx_A 241 GTLINDDAS 249 (255)
T ss_dssp SEEEESSCC
T ss_pred ceEEecCcc
Confidence 999988544
No 4
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=99.88 E-value=1e-22 Score=140.21 Aligned_cols=83 Identities=34% Similarity=0.648 Sum_probs=74.2
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhhCCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCCCce
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGDQVG 78 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~~~G 78 (88)
+||.|+++|||||||++||+ |++++|++++++|+.+.+.++||++|+++|.++|++++|+|+++|+.+.+++.|+.+|
T Consensus 156 ~Ad~liilTDVdGvy~~dP~~~p~a~~i~~i~~~e~~~~g~~~m~~~aa~~a~~~gv~v~I~~~~~~~~l~~~l~g~~~G 235 (247)
T 2a1f_A 156 EADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAEVIDKELKVMDLSAFTLARDHGMPIRVFNMGKPGALRQVVTGTEEG 235 (247)
T ss_dssp TCSEEEEEESSSSCBCC-------CCBCSEECHHHHHHTTCCSSCHHHHHHHHHHTCCEEEEETTSTTHHHHHHTCSCSS
T ss_pred CCCEEEEEeCCCcccCCCCCCCCCCeEcccCCHHHHHHcCccccCHHHHHHHHHcCCcEEEEeCCCchHHHHHHcCCCCc
Confidence 58999999999999999998 8899999999998877788899999999999999999999999999999999999999
Q ss_pred eEEec
Q 035510 79 TFIDR 83 (88)
Q Consensus 79 T~i~~ 83 (88)
|+|..
T Consensus 236 T~~~~ 240 (247)
T 2a1f_A 236 TTICE 240 (247)
T ss_dssp EEECC
T ss_pred eEEee
Confidence 99975
No 5
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=99.87 E-value=2.5e-22 Score=141.52 Aligned_cols=82 Identities=40% Similarity=0.705 Sum_probs=75.0
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhhCCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCCCce
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGDQVG 78 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~~~G 78 (88)
+||.|+++|||||||++||+ |+|++|+++++.|+++.|...||+.|+++|.++|++++|+|+++|++|.+++.|+.+|
T Consensus 197 ~Ad~LiilTDVdGVy~~dP~~~p~A~~i~~is~~e~~~~g~~v~k~~Aa~~a~~~Gi~v~I~~g~~p~~l~~~l~Ge~~G 276 (281)
T 3nwy_A 197 GADVVLMAKAVDGVFAEDPRVNPEAELLTAVSHREVLDRGLRVADATAFSLCMDNGMPILVFNLLTDGNIARAVRGEKIG 276 (281)
T ss_dssp TCSEEEEEESSSSCBCC-----CCCCBCSEECHHHHHTTTCCSSCHHHHHHHHTTTCCEEEEETTSTTHHHHHHHTCCCS
T ss_pred CCCEEEEeeccCccccCCCCcCCCCeEcccccHHHHHHcCCCcHHHHHHHHHHHCCCeEEEecCCCchHHHHHHcCCCCc
Confidence 69999999999999999998 8999999999998877777889999999999999999999999999999999999999
Q ss_pred eEEe
Q 035510 79 TFID 82 (88)
Q Consensus 79 T~i~ 82 (88)
|+|.
T Consensus 277 T~i~ 280 (281)
T 3nwy_A 277 TLVT 280 (281)
T ss_dssp EEEC
T ss_pred eEEe
Confidence 9985
No 6
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=99.87 E-value=3.6e-22 Score=137.87 Aligned_cols=84 Identities=35% Similarity=0.630 Sum_probs=79.3
Q ss_pred CCcEEEEee-ccCeecCCCCC--CCceeeeccCHHHHhhCCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCCCc
Q 035510 1 HAEVVLKGT-NVDGVYDCHSR--DNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGDQV 77 (88)
Q Consensus 1 ~ad~li~~t-dVdGvy~~dP~--~~a~~i~~i~~~e~~~~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~~~ 77 (88)
+||.|+++| ||||||++||+ |++++|++++++|+.+.+.++||++|+++|.++|++++|+|+++|+.+.+++.|+..
T Consensus 155 ~Ad~LiilT~DVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~mk~~aa~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~ 234 (252)
T 1z9d_A 155 EADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIKRGLKIMDATASTLSMDNDIDLVVFNMNEAGNIQRVVFGEHI 234 (252)
T ss_dssp TCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHHTTTCCCSCHHHHHHHHHTTCEEEEEETTSTTHHHHHHTTCCC
T ss_pred CCCEEEEecCCCCeeeCCCCCCCCCCeEeeEecHHHHHhccccccCHHHHHHHHHcCCeEEEEeCCCchHHHHHHcCCCC
Confidence 589999999 99999999998 889999999999887778889999999999999999999999999999999999989
Q ss_pred eeEEecC
Q 035510 78 GTFIDRT 84 (88)
Q Consensus 78 GT~i~~~ 84 (88)
||+|.+.
T Consensus 235 GT~i~~~ 241 (252)
T 1z9d_A 235 GTTVSNK 241 (252)
T ss_dssp SEEEECC
T ss_pred ceEEecC
Confidence 9999875
No 7
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=99.87 E-value=4.8e-22 Score=136.90 Aligned_cols=82 Identities=27% Similarity=0.516 Sum_probs=77.2
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhhCCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCC-Cc
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGD-QV 77 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~-~~ 77 (88)
+||.|+++|||||||++||+ |+|++|++++++|+.+.|.++||+.|+++|.++|++++|+|+++|+++.+++.|+ .+
T Consensus 156 ~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~g~~~m~~~a~~~a~~~gv~v~I~~g~~~~~l~~~l~g~~g~ 235 (240)
T 4a7w_A 156 GSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSYNDALIGDIEVMDDTAISLAKDNKLPIVVCNMFKKGNLLQVIKHQQGV 235 (240)
T ss_dssp TCSEEEEEESSSSEESSCTTTCTTCCEESEECHHHHHHSSCCSSCHHHHHHHHHTTCCEEEEESSSTTHHHHHHHHSCSS
T ss_pred CCCEEEEccCCCceECCCCCCCCCCeEcceecHHHHHhcCccccHHHHHHHHHHCCCeEEEECCCCccHHHHHHCCCCCC
Confidence 69999999999999999998 8899999999999888888999999999999999999999999999999999987 57
Q ss_pred eeEEe
Q 035510 78 GTFID 82 (88)
Q Consensus 78 GT~i~ 82 (88)
||.|+
T Consensus 236 GT~i~ 240 (240)
T 4a7w_A 236 FSMVK 240 (240)
T ss_dssp CEEEC
T ss_pred ceeeC
Confidence 99984
No 8
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A*
Probab=99.86 E-value=7.2e-22 Score=134.21 Aligned_cols=83 Identities=24% Similarity=0.452 Sum_probs=73.9
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhhC----CCC------cchHHHHHHHHhCCCCEEEEeCCCcchH
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGSR----GAI------PMDSTALSFCDENSIPVVVFNLLEPGNI 68 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~~----g~~------~~d~~a~~la~~~gi~v~I~ng~~~~~i 68 (88)
+||.|+++|||||||++||+ |++++|++++++|+.+. +.. .+|++|+++|.++|++++|+|+++|+++
T Consensus 131 ~Ad~liilTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~l~~~~~~~~ggm~~~~k~~a~~~a~~~gi~v~I~~~~~~~~l 210 (226)
T 2j4j_A 131 SSKTLVVATNVDGVYEKDPRIYADVKLIPHLTTQDLRKILEGSQSVQAGTYELLDPLAIKIVERSKIRVIVMNYRKLNRI 210 (226)
T ss_dssp TCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHHHC----------CCSCHHHHHHHHHTTCEEEEEEGGGGGGH
T ss_pred CCCEEEEeeccceeeCCCCCCCCCCeEccccCHHHHHHHhhcCCCCcCCccccchHHHHHHHHHCCCeEEEEeCCChhHH
Confidence 58999999999999999998 88999999999876542 322 5699999999999999999999999999
Q ss_pred HHhhcCCCceeEEec
Q 035510 69 SKAICGDQVGTFIDR 83 (88)
Q Consensus 69 ~~~l~g~~~GT~i~~ 83 (88)
.+++.|+..||+|.|
T Consensus 211 ~~~~~g~~~GT~i~~ 225 (226)
T 2j4j_A 211 IDILKGEEVSSIIEP 225 (226)
T ss_dssp HHHHTTCSSCEEEEC
T ss_pred HHHHcCCCCceEEee
Confidence 999999999999986
No 9
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=99.86 E-value=1.5e-21 Score=135.28 Aligned_cols=83 Identities=35% Similarity=0.614 Sum_probs=71.8
Q ss_pred CCcEEEEeec-cCeecCCCCC--CCceeeeccCHHHHhhCCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCCCc
Q 035510 1 HAEVVLKGTN-VDGVYDCHSR--DNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGDQV 77 (88)
Q Consensus 1 ~ad~li~~td-VdGvy~~dP~--~~a~~i~~i~~~e~~~~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~~~ 77 (88)
+||.|+++|| |||||++||+ |++++|++++++|+.+.+.++||+.|+++|.++|++++|+|+++|+++.+++.|+..
T Consensus 171 ~Ad~LiilTD~VdGVy~~dP~~~p~a~~i~~is~~e~~~~~~~~mk~~aa~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~ 250 (256)
T 2va1_A 171 ESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNK 250 (256)
T ss_dssp TCSEEEEEESSCCSBCSCC--------CBSEEEHHHHHHHTCCSSCHHHHHHHHHTTCEEEEEESSSTTHHHHHHTTCSC
T ss_pred CCCEEEEeecccCeEEcCCCCCCCCCEEccEEcHHHHHHhccCCccHHHHHHHHHCCCeEEEEeCCCchHHHHHHcCCCC
Confidence 5899999999 9999999998 889999999999876656788999999999999999999999999999999999999
Q ss_pred eeEEec
Q 035510 78 GTFIDR 83 (88)
Q Consensus 78 GT~i~~ 83 (88)
||+|.+
T Consensus 251 GT~i~~ 256 (256)
T 2va1_A 251 YTIVSK 256 (256)
T ss_dssp EEEEEC
T ss_pred eEEEeC
Confidence 999963
No 10
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A*
Probab=99.84 E-value=2.6e-21 Score=133.24 Aligned_cols=83 Identities=24% Similarity=0.329 Sum_probs=73.9
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhhC----CC-----CcchHHHHHHHHhCCCCEEEEeCCCcchHH
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGSR----GA-----IPMDSTALSFCDENSIPVVVFNLLEPGNIS 69 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~~----g~-----~~~d~~a~~la~~~gi~v~I~ng~~~~~i~ 69 (88)
+||.|+++|||||||++||+ |++++|+++++.|+.+. |. ..++..|++++.+.+++++|+|+++|+++.
T Consensus 151 ~Ad~liilTDVdGVy~~dP~~~p~a~~i~~i~~~e~~~~~~~~g~~~g~m~~~~~~A~~~~~~~~~~v~I~ng~~~~~l~ 230 (244)
T 2brx_A 151 KADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELLEIVGKGIEKAGSSSVIDPLAAKIIARSGIKTIVIGKEDAKDLF 230 (244)
T ss_dssp TCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC--------CCSCHHHHHHHHHHTCCEEEECHHHHTCHH
T ss_pred CCCEEEEEeCCCccCCCCCCCCCCCeEeeEECHHHHHHHHhccCCCCCCCcchHHHHHHHHHHCCCeEEEEeCCChhHHH
Confidence 58999999999999999999 88999999999876542 33 566899999999999999999999999999
Q ss_pred HhhcCCCceeEEec
Q 035510 70 KAICGDQVGTFIDR 83 (88)
Q Consensus 70 ~~l~g~~~GT~i~~ 83 (88)
+++.|+..||+|.|
T Consensus 231 ~~l~g~~~GT~i~~ 244 (244)
T 2brx_A 231 RVIKGDHNGTTIEP 244 (244)
T ss_dssp HHHTTCSSSEEECC
T ss_pred HHHcCCCCceEecC
Confidence 99999989999975
No 11
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=99.83 E-value=9.3e-21 Score=137.44 Aligned_cols=84 Identities=21% Similarity=0.261 Sum_probs=50.4
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCH--HHHhhC--------CCCcc--hHHHHHHHHhCCCCEEEEeCCCcc
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISF--RELGSR--------GAIPM--DSTALSFCDENSIPVVVFNLLEPG 66 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~--~e~~~~--------g~~~~--d~~a~~la~~~gi~v~I~ng~~~~ 66 (88)
+||.|+++|||||||++||+ |++++|+++++ +|+.+. ++++| ++.|++.|.++|++++|+|+++|+
T Consensus 161 ~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~i~~~~~e~~~l~~~~~s~~gtGgM~~Kl~Aa~~a~~~Gv~v~I~~g~~~~ 240 (367)
T 2j5v_A 161 GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPG 240 (367)
T ss_dssp TCSEEEEEECC------------------------------------------CHHHHHHHHHHHHTTCEEEEEETTSTT
T ss_pred CCCEEEEeecCCceECCCCCCCCCCeEeeeeCCCHHHHHHHhhccCCCcCcCccHHHHHHHHHHHHcCCCEEEEcCCCch
Confidence 58999999999999999998 89999999998 666431 56778 458999999999999999999999
Q ss_pred hHHHhhcCCCceeEEecC
Q 035510 67 NISKAICGDQVGTFIDRT 84 (88)
Q Consensus 67 ~i~~~l~g~~~GT~i~~~ 84 (88)
++.+++.|+..||+|.+.
T Consensus 241 ~L~~~l~g~~~GT~i~~~ 258 (367)
T 2j5v_A 241 VIGDVMEGISVGTLFHAQ 258 (367)
T ss_dssp HHHHHHHTCCCSEEECCC
T ss_pred HHHHHhcCCCCcEEEEcC
Confidence 999999999999999874
No 12
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=99.82 E-value=1.7e-20 Score=126.78 Aligned_cols=81 Identities=32% Similarity=0.491 Sum_probs=71.8
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhhC----CC-----CcchHHHHHHHHhCCCCEEEEeCCCcchHH
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGSR----GA-----IPMDSTALSFCDENSIPVVVFNLLEPGNIS 69 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~~----g~-----~~~d~~a~~la~~~gi~v~I~ng~~~~~i~ 69 (88)
+||.|+++|||||||++||+ |++++|+++++.|+.+. |. ..++..|++++.+.+++++|+|+ +|+++.
T Consensus 128 ~Ad~li~lTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~~~~~~g~~~g~~~~~~~~a~~~~~~~~~~v~I~~g-~~~~l~ 206 (219)
T 2ij9_A 128 KADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEIVSRSSAKAGTNVVIDLLAAKIIERSKIKTYVILG-TPENIM 206 (219)
T ss_dssp TCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHHHHTCC-----CCCCCSCHHHHHHHHHHTCCEEEEEC-CHHHHH
T ss_pred CCCeEEEeeCCCceecCCCCCCCCCeEeeeeCHHHHHHHHhcCCCCCCCccchHHHHHHHHHHCCCeEEEEEC-CHhHHH
Confidence 58999999999999999998 88999999999876542 22 45689999999999999999999 999999
Q ss_pred HhhcCCCceeEEe
Q 035510 70 KAICGDQVGTFID 82 (88)
Q Consensus 70 ~~l~g~~~GT~i~ 82 (88)
+++.|+..||+|.
T Consensus 207 ~~~~g~~~GT~i~ 219 (219)
T 2ij9_A 207 KAVKGEAVGTVIA 219 (219)
T ss_dssp HHHTTCCCSEEEC
T ss_pred HHHcCCCCCeEeC
Confidence 9999998999984
No 13
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=99.82 E-value=6e-20 Score=128.58 Aligned_cols=86 Identities=29% Similarity=0.421 Sum_probs=77.8
Q ss_pred CCcEEEEeeccCeecCCCC---C-CCceeeeccCHHHHhhC-CCCcchHHHHHHHH--hCCCCEEEEeCCCcchHHHhhc
Q 035510 1 HAEVVLKGTNVDGVYDCHS---R-DNNATFEHISFRELGSR-GAIPMDSTALSFCD--ENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP---~-~~a~~i~~i~~~e~~~~-g~~~~d~~a~~la~--~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
+||.|+++|||||||++|| . |++++|+++++.|+.+. +.++|+.++.+.+. +++++++|+|+++|+++.+++.
T Consensus 182 ~Ad~LiilTDVdGvy~~dP~~~~~~~a~~i~~i~~~e~~~~~g~ggM~~K~~~~~~~~~~~~~v~I~~g~~~~~l~~~l~ 261 (276)
T 2ogx_A 182 GAAGLTIVENVDGIYTADPNGPDRGQARFLPETSATDLAKSEGPLPVDRALLDVMATARHIERVQVVNGLVPGRLTAALR 261 (276)
T ss_dssp TCSEEEEEESSSSEESSCTTSTTGGGCCEESEEEHHHHHTSCSCCSSCHHHHHHHHTCSSCCEEEEEETTSTTHHHHHHT
T ss_pred CCCEEEEEeCCCccCCCCCCccCCCCCeEcceeCHHHHHHHhCcCChHHHHHHHHHHhcCCCeEEEEECCCccHHHHHHc
Confidence 5899999999999999999 4 78999999999988765 78899999988888 5688999999999999999999
Q ss_pred CCCceeEEecCCC
Q 035510 74 GDQVGTFIDRTGR 86 (88)
Q Consensus 74 g~~~GT~i~~~~~ 86 (88)
|+..||+|.+..|
T Consensus 262 g~~~GT~i~~~~~ 274 (276)
T 2ogx_A 262 GEHVGTLIRTGVR 274 (276)
T ss_dssp TCCCSEEEECSCC
T ss_pred CCCCceEEccCCC
Confidence 9889999988654
No 14
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3
Probab=99.81 E-value=3e-20 Score=127.90 Aligned_cols=82 Identities=17% Similarity=0.213 Sum_probs=72.2
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHH--HHhh--------CCCCcc--hHHHHHHHHhCCCCEEEEeCCCcc
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFR--ELGS--------RGAIPM--DSTALSFCDENSIPVVVFNLLEPG 66 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~--e~~~--------~g~~~~--d~~a~~la~~~gi~v~I~ng~~~~ 66 (88)
+||.|+++|||||||++||+ |++++|+++++. |+.+ .++++| |+.|+..|.++|++++|+|+++|+
T Consensus 154 ~Ad~liilTdVdGVy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~~~~~~~~ggm~~k~~aa~~a~~~gv~v~I~~g~~~~ 233 (251)
T 2ako_A 154 DADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKFLLEHNKKMFLASGFDLS 233 (251)
T ss_dssp TCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCCCGGGC---------CBSCHHHHHHHHHHHHHHTTCEEEEEESSSCH
T ss_pred CCCEEEEEeCCCceeeCCCCCCCCCeEeeEeccchHHHHHHhcccCCCCccCchHHHHHHHHHHHHCCCeEEEEeCCChh
Confidence 58999999999999999998 889999999987 6543 144656 789999999999999999999999
Q ss_pred hHHH--hhcCCCceeEEe
Q 035510 67 NISK--AICGDQVGTFID 82 (88)
Q Consensus 67 ~i~~--~l~g~~~GT~i~ 82 (88)
++.+ ++.|+..||+|.
T Consensus 234 ~l~~~~~~~g~~~GT~i~ 251 (251)
T 2ako_A 234 VAKTFLLEDKQIGGTLFE 251 (251)
T ss_dssp HHHHHHHSCCCCSSEEEC
T ss_pred hhhhhHHhcCCCCceEeC
Confidence 9999 999988999984
No 15
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=99.77 E-value=1.7e-18 Score=122.04 Aligned_cols=82 Identities=13% Similarity=0.167 Sum_probs=72.2
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHHHhh---C--CCCcc--hHHHHHHHHhCCCC-EEEEeCCCcchH-HHh
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRELGS---R--GAIPM--DSTALSFCDENSIP-VVVFNLLEPGNI-SKA 71 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e~~~---~--g~~~~--d~~a~~la~~~gi~-v~I~ng~~~~~i-~~~ 71 (88)
+||.|+++|||||||++||+| +++|++++++|+.+ . +.++| ++.|+..+.++|++ ++|+||+.|+++ .++
T Consensus 208 ~Ad~LiilTdVdGVy~~dp~~-a~~i~~is~~e~~~~~~~g~~~gGM~~Kl~aa~~a~~~gv~~v~I~~g~~~~~ll~~l 286 (298)
T 2rd5_A 208 GAEKLILLTDVAGILENKEDP-SSLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQGVKTASIIDGRRQHSLLHEI 286 (298)
T ss_dssp TCSEEEEEESSSSEESSSSCT-TSEECEEEHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHH
T ss_pred CCCEEEEEeCCcCeecCCCCC-CCCcccCCHHHHHHHHHCCCCCCchHHHHHHHHHHHHcCCCeEEEecCCCCchHHHHH
Confidence 589999999999999999985 89999999987654 2 45678 57889999999998 999999999999 889
Q ss_pred hcCCCceeEEec
Q 035510 72 ICGDQVGTFIDR 83 (88)
Q Consensus 72 l~g~~~GT~i~~ 83 (88)
+.|+..||+|.+
T Consensus 287 ~~~~~~GT~i~~ 298 (298)
T 2rd5_A 287 MSDEGAGTMITG 298 (298)
T ss_dssp HSSSCSEEEEEC
T ss_pred hcCCCCceEEeC
Confidence 999889999975
No 16
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=99.77 E-value=1.9e-18 Score=121.83 Aligned_cols=84 Identities=18% Similarity=0.172 Sum_probs=74.1
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHHHhh---CCCCcc--hHHHHHHHHhCCCC-EEEEeCCCcchH-HHhhc
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRELGS---RGAIPM--DSTALSFCDENSIP-VVVFNLLEPGNI-SKAIC 73 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e~~~---~g~~~~--d~~a~~la~~~gi~-v~I~ng~~~~~i-~~~l~ 73 (88)
+||.|+++|||||||++||+ ++++|++++++|+.+ .+.++| ++.|+..+.++|++ ++|+|+++|+++ .+++.
T Consensus 202 ~Ad~liilTDVdGV~~~dP~-~~~~i~~is~~e~~~l~~~~~ggM~~Kl~aa~~a~~~gv~~v~I~~g~~p~~ll~~l~~ 280 (299)
T 2ap9_A 202 GAEKLLMLTDIDGLYTRWPD-RDSLVSEIDTGTLAQLLPTLELGMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFT 280 (299)
T ss_dssp TCSEEEEEESSSSEETTTTC-TTCEESEEEHHHHHHHGGGSCTTTHHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHS
T ss_pred CCCEEEEEeCChhhhcCCCC-CCcChhhcCHHHHHHHHHhhcCchHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhc
Confidence 58999999999999999997 578999999987654 367888 67899999999998 999999999986 88899
Q ss_pred CCCceeEEecCC
Q 035510 74 GDQVGTFIDRTG 85 (88)
Q Consensus 74 g~~~GT~i~~~~ 85 (88)
|+..||+|.++.
T Consensus 281 ~~~~GT~i~~~~ 292 (299)
T 2ap9_A 281 DAGTGTKVVRGE 292 (299)
T ss_dssp CCCCSEEEECCC
T ss_pred CCCCcEEEecCC
Confidence 999999998753
No 17
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=99.76 E-value=4.6e-18 Score=118.53 Aligned_cols=83 Identities=25% Similarity=0.454 Sum_probs=70.6
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhhCC--CCcchHHHHHHHHh--CCCCEEEEeCCCcchHHHhhcC
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGSRG--AIPMDSTALSFCDE--NSIPVVVFNLLEPGNISKAICG 74 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~~g--~~~~d~~a~~la~~--~gi~v~I~ng~~~~~i~~~l~g 74 (88)
+||.|+++|||||||++||+ |++++|++++++|+.+.. ...++......+.. .+++++|+|+++|+++.+++.|
T Consensus 181 ~Ad~Li~lTDVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~g~~~~ggm~~kl~aa~~~~~v~I~~g~~~~~l~~~l~g 260 (270)
T 2ogx_B 181 GCKQMIFVKDEDGLYTANPKTSKDATFIPRISVDEMKAKGLHDSILEFPVLDLLQSAQHVREVQVVNGLVPGNLTRALAG 260 (270)
T ss_dssp TCSEEEEEESSSSEESSCSSSCTTCCEESEEEHHHHHHTTCCCTTSCHHHHHHHHHCSSCCEEEEEETTSTTHHHHHHTT
T ss_pred CCCEEEEEeCCCcccCCCCCCCCCCeEcceeCHHHHHHHhcCCCcccHHHHHHHHHhhcCCcEEEEeCCCchHHHHHHcC
Confidence 58999999999999999998 889999999998876642 23577665555554 5779999999999999999999
Q ss_pred CCceeEEec
Q 035510 75 DQVGTFIDR 83 (88)
Q Consensus 75 ~~~GT~i~~ 83 (88)
+..||+|.+
T Consensus 261 ~~~GT~i~~ 269 (270)
T 2ogx_B 261 EHVGTIITA 269 (270)
T ss_dssp CCCSEEEEC
T ss_pred CCCCeEecC
Confidence 999999976
No 18
>3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.76 E-value=1.5e-18 Score=121.07 Aligned_cols=82 Identities=29% Similarity=0.395 Sum_probs=65.7
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhhC--------CCCcc--hHHHHHHHHhCCCCEEEEeCCCcchH
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGSR--------GAIPM--DSTALSFCDENSIPVVVFNLLEPGNI 68 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~~--------g~~~~--d~~a~~la~~~gi~v~I~ng~~~~~i 68 (88)
+||.|+++|||||||++||+ |++++|+++++.|+.+. .+++| ++.|+..+.++|++++|+|++.|+++
T Consensus 172 ~Ad~li~ltdv~Gv~~~dp~~~~~a~~i~~i~~~e~~~~l~~~~~~~~tgGM~~Kl~aa~~a~~~Gv~v~I~~g~~~~~l 251 (269)
T 3ll9_A 172 MPERVILGTDVDGVYTRNPKKHPDARLLDVIGSLDDLESLDGTLNTDVTGGMVGKIRELLLLAEKGVESEIINAAVPGNI 251 (269)
T ss_dssp CCSEEEEEESSSSCBSSCTTTCTTCCBCSBCCC-------------------SHHHHHHHHHHHTTCCEEEEESSSTTHH
T ss_pred CCCeEEEecCCCEEEcCCCCcCCcceEccccCHHHHHHHhcccCCCcCcCCcHHHHHHHHHHHhCCCeEEEEeCCCchHH
Confidence 58999999999999999998 89999999998765321 34566 67788888889999999999999999
Q ss_pred HHhhcCCCc-eeEEe
Q 035510 69 SKAICGDQV-GTFID 82 (88)
Q Consensus 69 ~~~l~g~~~-GT~i~ 82 (88)
.+++.|+.+ ||+|.
T Consensus 252 ~~~~~g~~~~GT~i~ 266 (269)
T 3ll9_A 252 ERALLGEEVRGTRIT 266 (269)
T ss_dssp HHHHHTCCCSSEEC-
T ss_pred HHHHCCCCCCcEEEE
Confidence 999999998 99986
No 19
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=99.76 E-value=9e-19 Score=129.76 Aligned_cols=76 Identities=28% Similarity=0.399 Sum_probs=66.2
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhh---CCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCC
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGS---RGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGD 75 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~---~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~ 75 (88)
+||.+++||||||||++||+ |+|++|++++++|+.+ .|.++||+.|+++|.++|||++|.|+++|+
T Consensus 200 ~A~~~~i~TDVdGvyt~dP~~~~~a~~i~~is~~e~~ela~~Ga~vl~~~a~~~a~~~~ipi~i~~~~~p~--------- 270 (446)
T 3tvi_A 200 NADLYENWTDVSGFLMADPRIVENPKTISKISYKELRELSYMGATVLHEEAIFPVKDSGIPINIKNTNKPS--------- 270 (446)
T ss_dssp TCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHTTTC----CCSTTTHHHHHSSCCEEEEETTBTT---------
T ss_pred CCCEEEEEeCCCccCCCCCCcCCCCeEcceeCHHHHHHHHhCCCCcchHHHHHHHHHcCCeEEEecCCCCC---------
Confidence 68999999999999999999 9999999999998877 478899999999999999999999999885
Q ss_pred CceeEEecCC
Q 035510 76 QVGTFIDRTG 85 (88)
Q Consensus 76 ~~GT~i~~~~ 85 (88)
..||+|.+..
T Consensus 271 ~~GT~i~~~~ 280 (446)
T 3tvi_A 271 DPGTLILSDT 280 (446)
T ss_dssp SCCEEEECTT
T ss_pred CCCEEEecCC
Confidence 5699998753
No 20
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=99.75 E-value=5.9e-18 Score=120.69 Aligned_cols=83 Identities=12% Similarity=0.127 Sum_probs=72.9
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHHHhh---C--CCCcc--hHHHHHHHHhCCCC-EEEEeCCCcchH-HHh
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRELGS---R--GAIPM--DSTALSFCDENSIP-VVVFNLLEPGNI-SKA 71 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e~~~---~--g~~~~--d~~a~~la~~~gi~-v~I~ng~~~~~i-~~~ 71 (88)
+||.|+++|||||||++||+ ++++|++++++|+.+ . +.++| ++.|+..|.++|++ ++|+|+..|+++ .++
T Consensus 220 ~Ad~LiilTDVdGVy~~dp~-~a~~i~~is~~e~~~l~~~g~~~gGM~~Kl~Aa~~a~~~gv~~v~I~~g~~~~~ll~~l 298 (321)
T 2v5h_A 220 NAEKLILLTDTRGILEDPKR-PESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEI 298 (321)
T ss_dssp TCSEEEEEESSSSCBSSTTC-TTCBCCEEEHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHH
T ss_pred CCCEEEEeeCCCceEcCCCC-CCeeeeEEcHHHHHHHHhCCCCcCcHHHHHHHHHHHHHcCCCEEEEEeCCCCchHHHHH
Confidence 58999999999999999997 689999999987654 2 46778 57899999999998 999999999998 788
Q ss_pred hcCCCceeEEecC
Q 035510 72 ICGDQVGTFIDRT 84 (88)
Q Consensus 72 l~g~~~GT~i~~~ 84 (88)
+.|+..||+|.+.
T Consensus 299 ~~~~~~GT~I~~~ 311 (321)
T 2v5h_A 299 FTDAGIGTMIVGS 311 (321)
T ss_dssp HCCCCSEEEEECC
T ss_pred hcCCCCceEEECC
Confidence 8888899999875
No 21
>2egx_A Putative acetylglutamate kinase; struc genomics, NPPSFA, national project on protein structural AN functional analyses; 1.92A {Thermus thermophilus} PDB: 3u6u_A
Probab=99.73 E-value=6.7e-18 Score=117.49 Aligned_cols=79 Identities=19% Similarity=0.201 Sum_probs=65.5
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHHHh--h---CCCCcch--HHHHHHHHhCCC-CEEEEeCCCcchHHHhh
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRELG--S---RGAIPMD--STALSFCDENSI-PVVVFNLLEPGNISKAI 72 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e~~--~---~g~~~~d--~~a~~la~~~gi-~v~I~ng~~~~~i~~~l 72 (88)
+||.|+++|||||||+ ||+|++++|++++++|+. + .+.++|. +.|+..|.++|+ +++|+|+++|+++.++|
T Consensus 183 ~Ad~li~lTdVdGv~~-dp~~~a~~i~~i~~~e~~~~~l~~~~~ggm~~Kl~aa~~a~~~gv~~v~I~~g~~~~~l~~~l 261 (269)
T 2egx_A 183 GAEALVYLSNVPGLLA-RYPDEASLVREIPVERIEDPEYLALAQGRMKRKVMGAVEAVKGGVKRVVFADGRVENPIRRAL 261 (269)
T ss_dssp TCSEEEEEESSSSCBC-------CBCCEECHHHHHCHHHHTTSCHHHHHHHHHHHHHHHTTCSCEEEEESSSSSHHHHHH
T ss_pred CCCEEEEEeCchhhhc-CCCCCccccccCCHHHhhHHHhcCCCCCchHHHHHHHHHHHHcCCCeEEEEeCCCchHHHHHh
Confidence 5899999999999999 888789999999998886 4 3667785 689999999999 99999999999999999
Q ss_pred cCCCceeEEe
Q 035510 73 CGDQVGTFID 82 (88)
Q Consensus 73 ~g~~~GT~i~ 82 (88)
.| .||+|.
T Consensus 262 ~g--~GT~i~ 269 (269)
T 2egx_A 262 SG--EGTVVR 269 (269)
T ss_dssp TT--CSEEEC
T ss_pred CC--CCeEEC
Confidence 87 799984
No 22
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=99.73 E-value=5.1e-18 Score=127.39 Aligned_cols=75 Identities=27% Similarity=0.393 Sum_probs=68.7
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhhC---CCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCC
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGSR---GAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGD 75 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~~---g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~ 75 (88)
+||.+++||||||||++||+ |+|++|++++++|+.+. |.++|++.|+++|.++|||++|.|+++|+
T Consensus 245 ~Ad~l~i~TDVdGVytaDPr~v~~A~~I~~Is~~E~~ela~~Ga~vmh~~a~~~a~~~gIpv~I~n~~~p~--------- 315 (510)
T 2cdq_A 245 GLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGEIPVRVKNSYNPK--------- 315 (510)
T ss_dssp TCSEEEEEESSSSSBSSCTTTCTTCCBCCEEEHHHHHHHHHHHSSCCCHHHHHHHHHHTCCEEEEETTSTT---------
T ss_pred CCCEEEEEeCCCCcCCCCCCCCCCCEEecEeCHHHHHHHHhcCcchhHHHHHHHHHHCCCeEEEEccCcCC---------
Confidence 58999999999999999999 89999999999987663 88999999999999999999999999885
Q ss_pred CceeEEecC
Q 035510 76 QVGTFIDRT 84 (88)
Q Consensus 76 ~~GT~i~~~ 84 (88)
..||+|.+.
T Consensus 316 ~~GT~I~~~ 324 (510)
T 2cdq_A 316 APGTIITKT 324 (510)
T ss_dssp SCCEEEESC
T ss_pred CCCeEEecc
Confidence 569999875
No 23
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=99.72 E-value=3.5e-18 Score=120.14 Aligned_cols=83 Identities=17% Similarity=0.144 Sum_probs=67.7
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHH---Hhh--------CCCCcc--hHHHHHHHHhCCCCEEEEeCCCcch
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRE---LGS--------RGAIPM--DSTALSFCDENSIPVVVFNLLEPGN 67 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e---~~~--------~g~~~~--d~~a~~la~~~gi~v~I~ng~~~~~ 67 (88)
+||.|+++|||||||++||+ ++++|+++++.| +.+ .+.++| ++.|+..|.++|++++|+||++|++
T Consensus 182 ~Ad~LiilTDVdGVy~~dP~-~a~~i~~is~~e~~~l~~~~~~~~~~~~tggM~~Kl~Aa~~a~~~gv~v~I~~g~~p~~ 260 (286)
T 3d40_A 182 GRLRVVTLTDVDGIVTDGAG-GDTILPEVDARSPEQAYAALWGSSEWDATGAMHTKLDALVTCARRGAECFIMRGDPGSD 260 (286)
T ss_dssp SCEEEEEEESSSSCEECC----CEECCEEETTSCHHHHHHHHHSCC----CHHHHHHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred CCCEEEEecCCCeeEcCCCC-CCcCCcccCHHHHHHHHHhhccccCCcccCcHHHHHHHHHHHHHCCCcEEEEeCCCCCc
Confidence 58999999999999999998 899999998753 433 145778 5789999999999999999999999
Q ss_pred HHHhhcC-----CCc-eeEEecC
Q 035510 68 ISKAICG-----DQV-GTFIDRT 84 (88)
Q Consensus 68 i~~~l~g-----~~~-GT~i~~~ 84 (88)
+.+++.+ +++ ||+|...
T Consensus 261 l~~l~t~~~~~~~~~~~t~i~~~ 283 (286)
T 3d40_A 261 LEFLTAPFSSWPAHVRSTRITTT 283 (286)
T ss_dssp CGGGGSCGGGSCTTCCCEEEEC-
T ss_pred HHHHhcCcccCcccccceeeeec
Confidence 9999999 886 9999764
No 24
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=99.71 E-value=3.1e-17 Score=120.25 Aligned_cols=74 Identities=26% Similarity=0.397 Sum_probs=67.7
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhh---CCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCC
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGS---RGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGD 75 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~---~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~ 75 (88)
+||.|++||||||||++||+ |++++|++++++|+.+ .|.+.+|+.|+++|.++|+|++|+|+++|
T Consensus 166 ~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~el~~~Ga~v~~~~a~~~a~~~gi~v~I~n~~~~---------- 235 (421)
T 3ab4_A 166 NADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYSN---------- 235 (421)
T ss_dssp TCSEEEEEESCCSCBSSCTTTSTTCCBCSEECHHHHHHHHHTTCCSSCHHHHHHHHHTTCCEEEEESSSC----------
T ss_pred CCCEEEEEECCCccCcCCCCCCCCCeEccccCHHHHHHHHhcCCcCchHHHHHHHHHcCCCEEEecCcCC----------
Confidence 58999999999999999999 8999999999998765 48889999999999999999999999886
Q ss_pred CceeEEecC
Q 035510 76 QVGTFIDRT 84 (88)
Q Consensus 76 ~~GT~i~~~ 84 (88)
..||+|.+.
T Consensus 236 ~~GT~I~~~ 244 (421)
T 3ab4_A 236 DPGTLIAGS 244 (421)
T ss_dssp CCCEEECSC
T ss_pred CCCeEEEec
Confidence 469999865
No 25
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=99.71 E-value=1.8e-17 Score=122.75 Aligned_cols=75 Identities=28% Similarity=0.353 Sum_probs=68.2
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhh---CCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCC
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGS---RGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGD 75 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~---~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~ 75 (88)
+||.|++||||||||++||+ |++++|++++++|+.+ .|..+||+.|+++|.++|+|++|+|+++|+
T Consensus 213 ~Ad~l~i~TDVdGv~~~DPr~~~~a~~i~~is~~e~~ela~~G~kvlh~~a~~~a~~~gi~v~I~~~~~p~--------- 283 (449)
T 2j0w_A 213 HASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSSKDPR--------- 283 (449)
T ss_dssp TCSEEEEEESSSSEESSCTTTCTTCCEESEEEHHHHHHHHHTTCTTSCTTTHHHHHHHTCCEEEEESSCTT---------
T ss_pred CCCEEEEccccCCcCcCCCCCCCCCEEccCccHHHHHHHHhcCCccchHHHHHHHHHCCCeEEEEECCCCC---------
Confidence 58999999999999999999 8999999999998766 488888999999999999999999999885
Q ss_pred CceeEEecC
Q 035510 76 QVGTFIDRT 84 (88)
Q Consensus 76 ~~GT~i~~~ 84 (88)
..||+|.+.
T Consensus 284 ~~GT~I~~~ 292 (449)
T 2j0w_A 284 AGGTLVCNK 292 (449)
T ss_dssp SCCEEEESC
T ss_pred CCeeEEecc
Confidence 569999875
No 26
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=99.69 E-value=3.9e-17 Score=121.36 Aligned_cols=76 Identities=28% Similarity=0.395 Sum_probs=68.7
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhh---CCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCC
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGS---RGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGD 75 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~---~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~ 75 (88)
+||.|++||||||||++||+ |++++|+++++.|+.+ .|.++|++.|+++|.++|++++|+|+++|+
T Consensus 222 ~Ad~l~i~TDVdGv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~~m~~~a~~~a~~~gi~v~I~~~~~~~--------- 292 (473)
T 3c1m_A 222 DADIIEIWTDVSGVYTTDPRLVPTARRIPKLSYIEAMELAYFGAKVLHPRTIEPAMEKGIPILVKNTFEPE--------- 292 (473)
T ss_dssp TCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHHHHTTCTTSCGGGHHHHHHHTCCEEEEETTSTT---------
T ss_pred CCCEEEEeeCCCcceeCCCCCCCCCeEecccCHHHHHHHHhcCCcchHHHHHHHHHHcCCEEEEEecCCCC---------
Confidence 58999999999999999998 8999999999988765 588899999999999999999999999885
Q ss_pred CceeEEecCC
Q 035510 76 QVGTFIDRTG 85 (88)
Q Consensus 76 ~~GT~i~~~~ 85 (88)
..||+|.+..
T Consensus 293 ~~GT~i~~~~ 302 (473)
T 3c1m_A 293 SEGTLITNDM 302 (473)
T ss_dssp SCCEEEESCC
T ss_pred CceEEEeccc
Confidence 5699998753
No 27
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=99.69 E-value=4.4e-17 Score=124.13 Aligned_cols=75 Identities=21% Similarity=0.251 Sum_probs=68.0
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHhh---CCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhcCC
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELGS---RGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAICGD 75 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~~---~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~ 75 (88)
+||.|++||||||||++||+ |+|++|++++++|+.+ .|.++|++.|+++|.++|+|++|+|++++
T Consensus 167 ~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~ela~~G~~vm~p~a~~~a~~~gipv~I~n~~~~---------- 236 (600)
T 3l76_A 167 KADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVRSSWSD---------- 236 (600)
T ss_dssp TCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHTGGGGTTTCCHHHHHHHHHHTCCEEEEETTCC----------
T ss_pred CCCEEEEEECCCcCCCCCCCCCCCCeEeeEEcHHHHHHHHhCCCCccHHHHHHHHHHCCCeEEEEECCCC----------
Confidence 69999999999999999999 9999999999998776 48899999999999999999999999863
Q ss_pred CceeEEecCC
Q 035510 76 QVGTFIDRTG 85 (88)
Q Consensus 76 ~~GT~i~~~~ 85 (88)
..||+|.+..
T Consensus 237 ~~GT~I~~~~ 246 (600)
T 3l76_A 237 EPGTKVVAPP 246 (600)
T ss_dssp SCCEEEECCC
T ss_pred CCCeEEecCC
Confidence 4699998653
No 28
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A*
Probab=99.69 E-value=2.4e-17 Score=113.82 Aligned_cols=80 Identities=19% Similarity=0.227 Sum_probs=63.2
Q ss_pred CCcEEEEeeccCeecCCCCC--CCceeeeccCHHHHh---h--CCCCcc--hHHHHHHH-HhCCCCEEEEeCCCcchHHH
Q 035510 1 HAEVVLKGTNVDGVYDCHSR--DNNATFEHISFRELG---S--RGAIPM--DSTALSFC-DENSIPVVVFNLLEPGNISK 70 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~--~~a~~i~~i~~~e~~---~--~g~~~~--d~~a~~la-~~~gi~v~I~ng~~~~~i~~ 70 (88)
+||.|+++|||||||++||+ |++++|+++.. ++. + ..+++| ++.|+..+ .++|++++|+||++|+++.+
T Consensus 159 ~Ad~li~ltdvdGv~~~dp~~~~~a~~i~~i~~-~~~~~~~~~~~tGgM~~Kl~aA~~a~~~~Gv~v~I~~g~~~~~l~~ 237 (249)
T 3ll5_A 159 KPDVAVFLTDVDGIYSKDPKRNPDAVLLRDIDT-NITFDRVQNDVTGGIGKKFESMVKMKSSVKNGVYLINGNHPERIGD 237 (249)
T ss_dssp CCSEEEEEESSSSCBSSCTTTCTTCCBCCEECC-CC-------------HHHHHHHHHHHTTCTTCEEEEETTSGGGGGG
T ss_pred CCCEEEEEeCCCccCCCCCCCCCCcEEHHHHHH-HHhcccCCCeeECCHHHHHHHHHHHHHhcCCEEEEEeCCChhHHHH
Confidence 68999999999999999997 88999998842 221 1 145666 67777766 89999999999999999999
Q ss_pred hhcCCCc-eeEEe
Q 035510 71 AICGDQV-GTFID 82 (88)
Q Consensus 71 ~l~g~~~-GT~i~ 82 (88)
|.|+.. ||+|+
T Consensus 238 -l~g~~~~GT~i~ 249 (249)
T 3ll5_A 238 -IGKESFIGTVIR 249 (249)
T ss_dssp -TTSTTCCSEEEC
T ss_pred -hCCCCCCCEEeC
Confidence 999988 99984
No 29
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=99.64 E-value=6.9e-16 Score=107.76 Aligned_cols=79 Identities=19% Similarity=0.112 Sum_probs=68.2
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHHHhhC-----CCCcc--hHHHHHHHHhCCCC-EEEEeCCCcchH-HHh
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRELGSR-----GAIPM--DSTALSFCDENSIP-VVVFNLLEPGNI-SKA 71 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e~~~~-----g~~~~--d~~a~~la~~~gi~-v~I~ng~~~~~i-~~~ 71 (88)
+||.|+++|||||||++ | ++|++++++|+.+. ..++| |+.|+..|.++|++ ++|+||..|+++ .++
T Consensus 193 ~Ad~liilTDVdGvy~~-~----~~i~~i~~~e~~~~~~~g~~~gGM~~K~~aa~~a~~~gv~~v~I~~g~~~~~ll~~~ 267 (282)
T 2bty_A 193 MAEKLILLTDVDGVLKD-G----KLISTLTPDEAEELIRDGTVTGGMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEI 267 (282)
T ss_dssp TCSEEEEEESSSSCEET-T----EECCEECHHHHHHHHTTTCSCTTHHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHH
T ss_pred CCCEEEEEeCCCCeecC-c----hhhhhCCHHHHHHHHHcCCCCCcHHHHHHHHHHHHHhCCCeEEEecCCCCchHHHHH
Confidence 58999999999999997 2 89999999876542 45567 68899999999998 999999999998 788
Q ss_pred hcCCCceeEEecC
Q 035510 72 ICGDQVGTFIDRT 84 (88)
Q Consensus 72 l~g~~~GT~i~~~ 84 (88)
+.|+..||+|.+.
T Consensus 268 ~~~~~~GT~i~~~ 280 (282)
T 2bty_A 268 FSRKGIGTMIKEL 280 (282)
T ss_dssp SSSSCSSEEECCC
T ss_pred hcCCCCceEEEeC
Confidence 8888899999874
No 30
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=99.63 E-value=1.2e-15 Score=107.63 Aligned_cols=82 Identities=17% Similarity=0.159 Sum_probs=69.8
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHHHhhC-----CCCcch--HHHHHHHHhCCCC-EEEEeCCCcchH-HHh
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRELGSR-----GAIPMD--STALSFCDENSIP-VVVFNLLEPGNI-SKA 71 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e~~~~-----g~~~~d--~~a~~la~~~gi~-v~I~ng~~~~~i-~~~ 71 (88)
+||.|+++|||||||++ ++++|+++++.|+.+. +.++|. +.|+..+.++|++ ++|+||..|+.+ .++
T Consensus 209 ~Ad~li~lTdVdGv~~~----~a~~i~~i~~~e~~~~~~~~~~~ggM~~Kv~aa~~a~~~gv~~v~I~~g~~~~~ll~~~ 284 (300)
T 2buf_A 209 KAEKLMLLTNIAGLMDK----QGQVLTGLSTEQVNELIADGTIYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEI 284 (300)
T ss_dssp TCSEEEEEESSSCCBCT----TSCBCCEECHHHHHHHHHTTCSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHH
T ss_pred CCCEEEEEeCCCCeECC----CCcChhhCCHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCCEEEEeeCCCCchHHHHH
Confidence 58999999999999997 3789999999876542 457784 6888888999998 999999999998 778
Q ss_pred hcCCCceeEEecCCC
Q 035510 72 ICGDQVGTFIDRTGR 86 (88)
Q Consensus 72 l~g~~~GT~i~~~~~ 86 (88)
+.|+..||+|.+..+
T Consensus 285 ~~~~~~GT~i~~~~~ 299 (300)
T 2buf_A 285 FTDSGVGTLISNRKR 299 (300)
T ss_dssp SSTTCCSEEEECCCC
T ss_pred hcCCCCceEEEeCCC
Confidence 888889999987643
No 31
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=99.62 E-value=7.5e-16 Score=109.50 Aligned_cols=78 Identities=19% Similarity=0.131 Sum_probs=66.1
Q ss_pred CCcEEEEeeccCeecCCCCC-CCceeeeccCHHHHhhC------CCCcc--hHHHHHHHHhCCC-CEEEEeCCCcchHHH
Q 035510 1 HAEVVLKGTNVDGVYDCHSR-DNNATFEHISFRELGSR------GAIPM--DSTALSFCDENSI-PVVVFNLLEPGNISK 70 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~-~~a~~i~~i~~~e~~~~------g~~~~--d~~a~~la~~~gi-~v~I~ng~~~~~i~~ 70 (88)
+||.|+++|||||||+ ||+ |++++|++++++|+.+. +.++| ++.|+..+.++|+ +++|+| ++++.+
T Consensus 228 ~Ad~LiilTdVdGVy~-dp~~p~a~~i~~i~~~e~~~~~~~g~~~~GgM~~Kv~aa~~a~~~gv~~v~I~~---~~~l~~ 303 (316)
T 2e9y_A 228 NADLLVILTDVPGVAV-NYGREGERWLRRAAASELKKYLREGHFPPGSMGPKVEAAISFVERTGKPAVIGS---LEEARQ 303 (316)
T ss_dssp TCSEEEEEESSSSCEE-TTTSTTCEECSEEEHHHHHHHHHTTCSCTTTHHHHHHHHHHHHHHHCSCEEEEE---STTHHH
T ss_pred CCCEEEEEeCchHhhC-CCCCCCCcCCcEEcHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCCCeEEECc---HHHHHH
Confidence 5899999999999999 788 89999999999876542 34666 7888888888898 899997 677999
Q ss_pred hhcCCCceeEEec
Q 035510 71 AICGDQVGTFIDR 83 (88)
Q Consensus 71 ~l~g~~~GT~i~~ 83 (88)
++.| ..||+|.+
T Consensus 304 ~l~g-~~GT~i~~ 315 (316)
T 2e9y_A 304 VLSL-QAGTVVML 315 (316)
T ss_dssp HHTT-SSSEEEEC
T ss_pred HHcC-CCCeEEec
Confidence 9998 78999975
No 32
>1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1
Probab=99.61 E-value=2.1e-15 Score=107.12 Aligned_cols=79 Identities=19% Similarity=0.236 Sum_probs=65.1
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHHHhhC------CCCcch--HHH-HHHHHhCCCCEEEEeCCCcchHHHh
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRELGSR------GAIPMD--STA-LSFCDENSIPVVVFNLLEPGNISKA 71 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e~~~~------g~~~~d--~~a-~~la~~~gi~v~I~ng~~~~~i~~~ 71 (88)
+||.|+++|||||||++||+|++++|++++++|+.+. +.++|. +.+ .+++.+.+++++|+|+ +++.++
T Consensus 227 ~Ad~li~lTdVdGvy~~~p~~~a~~i~~i~~~e~~~~~~~g~~~~GgM~~Kv~aa~~~~~~~~~~v~I~~~---~~l~~~ 303 (314)
T 1e19_A 227 NADIFMILTDVNGAALYYGTEKEQWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGGERAIIAHL---EKAVEA 303 (314)
T ss_dssp TCSEEEEEESSSSCEETTTSTTCEECCEEEHHHHHHHHHTTCSCTTTHHHHHHHHHHHHHHTCSEEEEEEG---GGHHHH
T ss_pred CCCEEEEeccCCEEECCCCCCCCeECCEECHHHHHHHHhCCCcCCCChHHHHHHHHHHHHhCCCeEEEecH---HHHHHH
Confidence 5899999999999999998888999999999876542 346774 444 5778889999999984 578899
Q ss_pred hcCCCceeEEec
Q 035510 72 ICGDQVGTFIDR 83 (88)
Q Consensus 72 l~g~~~GT~i~~ 83 (88)
+.| ..||+|.+
T Consensus 304 ~~g-~~GT~i~~ 314 (314)
T 1e19_A 304 LEG-KTGTQVLP 314 (314)
T ss_dssp HTT-SSSEEEEC
T ss_pred HcC-CCCeEEcC
Confidence 987 47999975
No 33
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A*
Probab=99.60 E-value=7.4e-16 Score=109.14 Aligned_cols=78 Identities=18% Similarity=0.161 Sum_probs=66.4
Q ss_pred CCcEEEEeeccCeecCCCCC-CCceeeeccCHHHHhhC------CCCcc--hHHHHHHHHhCCC--CEEEEeCCCcchHH
Q 035510 1 HAEVVLKGTNVDGVYDCHSR-DNNATFEHISFRELGSR------GAIPM--DSTALSFCDENSI--PVVVFNLLEPGNIS 69 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~-~~a~~i~~i~~~e~~~~------g~~~~--d~~a~~la~~~gi--~v~I~ng~~~~~i~ 69 (88)
+||.|+++|||||||+ ||. |++++|++++++|+.+. +.++| ++.|+..+.++|+ +++|++ ++++.
T Consensus 221 ~Ad~LiilTdVdGVy~-dp~~~~a~~i~~i~~~e~~~~~~~g~~~~GgM~~Kv~aa~~a~~~gv~~~v~I~~---~~~l~ 296 (310)
T 2we5_A 221 DADALVILTGVDYVCI-NYGKPDEKQLTNVTVAELEEYKQAGHFAPGSMLPKIEAAIQFVESQPNKQAIITS---LENLG 296 (310)
T ss_dssp TCSEEEEECSCSSCEE-STTSTTCEECCEEEHHHHHHHHHTTCSCTTTTHHHHHHHHHHHHHSTTCEEEEEC---SGGGG
T ss_pred CCCEEEEEeCchHhhC-CCCCCCCeECCEEcHHHHHHHhhCCCCCCCChHHHHHHHHHHHHcCCCceEEECc---HHHHH
Confidence 5899999999999999 788 88999999999876542 33666 7888888888898 899997 67798
Q ss_pred HhhcCCCceeEEe
Q 035510 70 KAICGDQVGTFID 82 (88)
Q Consensus 70 ~~l~g~~~GT~i~ 82 (88)
+++.|+..||+|.
T Consensus 297 ~~l~g~~~GT~i~ 309 (310)
T 2we5_A 297 SMSGDEIVGTVVT 309 (310)
T ss_dssp GCBTTBCCSEEEE
T ss_pred HHHcCCCCCeEEe
Confidence 9999988999996
No 34
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Probab=99.59 E-value=2.9e-15 Score=103.39 Aligned_cols=78 Identities=17% Similarity=0.144 Sum_probs=65.3
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHHHhhC-----CCCcch---HHHHHHHHhCCCCEEEEeCCCcchHHHhh
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRELGSR-----GAIPMD---STALSFCDENSIPVVVFNLLEPGNISKAI 72 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e~~~~-----g~~~~d---~~a~~la~~~gi~v~I~ng~~~~~i~~~l 72 (88)
+|| |+++|||||||++| +++|++++++|+.+. ..++|. ..|.+.+++.+++++|+|+++|+++.+++
T Consensus 173 ~Ad-li~ltdV~Gv~~~d----~~~i~~i~~~e~~~l~~~~~~~gGm~~k~~~a~~~~~~~~~~v~I~~~~~~~~l~~~~ 247 (258)
T 1gs5_A 173 GAD-LILLSDVSGILDGK----GQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALF 247 (258)
T ss_dssp TCE-EEEEESSSSCBCTT----SCBCCEECHHHHHHHHHTTCSCTHHHHHHHHHHHHHHHHTSCEEEEESSCGGGHHHHH
T ss_pred CCc-EEEEeCCCceECCC----CCCCcccCHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhCCCEEEEecCCCchHHHHHh
Confidence 589 89999999999975 579999999876542 456673 35677778889999999999999999999
Q ss_pred cCCCceeEEec
Q 035510 73 CGDQVGTFIDR 83 (88)
Q Consensus 73 ~g~~~GT~i~~ 83 (88)
.|+..||+|..
T Consensus 248 ~~~~~GT~i~~ 258 (258)
T 1gs5_A 248 NGMPMGTRILA 258 (258)
T ss_dssp TTCCSSEEECC
T ss_pred cCCCCcEEEeC
Confidence 99989999963
No 35
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Probab=99.53 E-value=2.9e-14 Score=104.73 Aligned_cols=83 Identities=20% Similarity=0.191 Sum_probs=69.4
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHHHhh---CCCCcc--hHHHHHHHHhCCCC-EEEEeCCCcchH-HHhhc
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRELGS---RGAIPM--DSTALSFCDENSIP-VVVFNLLEPGNI-SKAIC 73 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e~~~---~g~~~~--d~~a~~la~~~gi~-v~I~ng~~~~~i-~~~l~ 73 (88)
+||.|+++|||||||++ ++++|++++++|+.+ .|.++| ++.|+..+.++|++ ++|+|+..|+++ ..++.
T Consensus 218 ~Ad~li~lTdvdGv~~~----~~~~i~~i~~~e~~~~~~~g~ggm~~Kl~aa~~a~~~gv~~v~I~~~~~~~~ll~~l~~ 293 (456)
T 3d2m_A 218 QAEKLVYLTLSDGISRP----DGTLAETLSAQEAQSLAEHAASETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFT 293 (456)
T ss_dssp TCSEEEEEESSSSCBCT----TSCBCSEEEHHHHHHHHTTCCHHHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHC
T ss_pred CCCEEEEEECCccccCC----CCCccccCCHHHHHHHHhccCCChHHHHHHHHHHHHhCCCEEEEecCcCCchHHHHHHh
Confidence 58999999999999996 478999999877654 355677 67889998999995 999999999998 55667
Q ss_pred CCCceeEEecCCCC
Q 035510 74 GDQVGTFIDRTGRM 87 (88)
Q Consensus 74 g~~~GT~i~~~~~~ 87 (88)
++..||+|.+...|
T Consensus 294 ~~~~GT~i~~~~~~ 307 (456)
T 3d2m_A 294 RNGIGTSIAKEAFV 307 (456)
T ss_dssp SSCSSEEEECCCCC
T ss_pred hcCCceeeecccce
Confidence 88899999987654
No 36
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803}
Probab=99.51 E-value=2e-14 Score=102.67 Aligned_cols=79 Identities=18% Similarity=0.180 Sum_probs=63.0
Q ss_pred CCcEEEEeeccCeecCCCCC-CCceeeeccCHHHHhh---C---CCCcc--hHHHHHHH-HhCCCCEEEEeCCCcchHHH
Q 035510 1 HAEVVLKGTNVDGVYDCHSR-DNNATFEHISFRELGS---R---GAIPM--DSTALSFC-DENSIPVVVFNLLEPGNISK 70 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~-~~a~~i~~i~~~e~~~---~---g~~~~--d~~a~~la-~~~gi~v~I~ng~~~~~i~~ 70 (88)
+||.|+++|||||||+ ||+ |++++|++++.+|+.+ . +.++| ++.|+..+ .+.+.+++|+|+ +.+.+
T Consensus 229 ~AD~LIiLTDVdGVy~-dp~~p~a~~I~~it~~e~~~li~~g~~~~GGM~pKl~AA~~av~~gg~~v~I~s~---~~l~~ 304 (317)
T 3kzf_A 229 NSDYLMILTDVLNACI-NYKKPDERKLEEIKLSEILALEKDGHFAAGSMGPKVRAAIEFTQATGKMSIITSL---STAVD 304 (317)
T ss_dssp TCSCEEECCSSSSCEE-SSSCSSCEECCEEEHHHHHHHHTTTSCC--CCHHHHHHHHHHHHHHCCCEEECCG---GGHHH
T ss_pred CCCEEEEecCCCeeeC-CCCCCCCeECcCcCHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCCCeEEEcch---HHHHH
Confidence 5899999999999999 999 9999999999887643 1 34567 66665554 556789999995 57889
Q ss_pred hhcCCCceeEEecC
Q 035510 71 AICGDQVGTFIDRT 84 (88)
Q Consensus 71 ~l~g~~~GT~i~~~ 84 (88)
++.|+ .||+|.++
T Consensus 305 ~l~G~-~GT~I~~d 317 (317)
T 3kzf_A 305 ALNGK-CGTRIIKD 317 (317)
T ss_dssp HHTTS-SSEEEECC
T ss_pred HHCCC-CCeEEecC
Confidence 99988 79999873
No 37
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A*
Probab=99.50 E-value=3.7e-14 Score=98.81 Aligned_cols=76 Identities=28% Similarity=0.287 Sum_probs=58.4
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCH---HHHhh--------CCCCcc--hHHHHHHHHhCCCCEEEEeCCCcch
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISF---RELGS--------RGAIPM--DSTALSFCDENSIPVVVFNLLEPGN 67 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~---~e~~~--------~g~~~~--d~~a~~la~~~gi~v~I~ng~~~~~ 67 (88)
+||.|+++||||||| +||+ ++++++. +++.+ .++++| ++.++..+.+ +++|+||++|++
T Consensus 177 ~Ad~li~ltdvdGv~-~d~~----~i~~~~~~e~~~l~~~~~~~~~~~~tGGM~~Kv~aa~~a~~---~v~I~~g~~~~~ 248 (266)
T 3k4o_A 177 KADLILYATDVDGVL-IDNK----PIKRIDKNNIYKILNYLSGSNSIDVTGGMKYKIEMIRKNKC---RGFVFNGNKANN 248 (266)
T ss_dssp TCSEEEEEESSSSSB-SSSS----BCSEECTTTHHHHHHHHHSTTCSCCSSHHHHHHHHHHHTTC---EEEEEETTSTTH
T ss_pred CCCEEEEEecCCeEE-eCCe----ecCcCCHHHHHHHHHHhccccCCcccCCHHHHHHHHHHHhc---CEEEEeCCCccH
Confidence 589999999999999 7876 4444432 33322 145567 5666655554 999999999999
Q ss_pred HHHhhcCCCceeEEecC
Q 035510 68 ISKAICGDQVGTFIDRT 84 (88)
Q Consensus 68 i~~~l~g~~~GT~i~~~ 84 (88)
+.+++.|+.+||+|.|.
T Consensus 249 l~~~l~g~~~GT~i~~~ 265 (266)
T 3k4o_A 249 IYKALLGEVEGTEIDFS 265 (266)
T ss_dssp HHHHHTTCCCSEEEECC
T ss_pred HHHHhCCCCCceEEEeC
Confidence 99999999999999984
No 38
>4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans}
Probab=99.46 E-value=2.3e-13 Score=97.71 Aligned_cols=79 Identities=18% Similarity=0.193 Sum_probs=62.6
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHHHhh---C---CCCcc--hHHHHHHHHhC--CCCEEEEeCCCcchHHH
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRELGS---R---GAIPM--DSTALSFCDEN--SIPVVVFNLLEPGNISK 70 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e~~~---~---g~~~~--d~~a~~la~~~--gi~v~I~ng~~~~~i~~ 70 (88)
+||.|+++|||||||+.+|+|++++|++++.+|+.+ . +.++| ++.|+.-+.++ +..++|.+ ++.+.+
T Consensus 244 ~Ad~LiiLTdV~gv~~~~~~~~~~~i~~it~~e~~~~~~~g~~~~GgM~pKv~Aa~~~v~~g~g~~~iI~~---~~~~~~ 320 (332)
T 4axs_A 244 NADIFVVLTAVDYVYVDFNKPTQKALKTVDVKALNNFINQDQFAKGSMLPKIKAAMGFVNGHPNRSAIIAD---LSKVED 320 (332)
T ss_dssp TCSEEEEECSCSSCEESTTSTTCEECSSCBHHHHHHHHHTTCSCTTTTHHHHHHHHHHHTTCTTCEEEEEC---STTHHH
T ss_pred CCceEEEEecCCceEcCCCCcchhhcccCCHHHHHHHHHCCCcCcCCcHHHHHHHHHHHHhCCCcEEEECC---HHHHHH
Confidence 599999999999999988888899999999887643 2 45667 77787665555 45677765 677999
Q ss_pred hhcCCCceeEEec
Q 035510 71 AICGDQVGTFIDR 83 (88)
Q Consensus 71 ~l~g~~~GT~i~~ 83 (88)
++.|+ .||+|..
T Consensus 321 ~l~g~-~GT~IvA 332 (332)
T 4axs_A 321 ALKGL-SGTKIIA 332 (332)
T ss_dssp HTTTS-SSEEEBC
T ss_pred HHCCC-CCcEEeC
Confidence 99986 6999963
No 39
>3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A*
Probab=99.26 E-value=9.5e-12 Score=88.49 Aligned_cols=81 Identities=12% Similarity=0.143 Sum_probs=60.3
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHH-H---hhC--CCCcc--hHHHHHHHHhC---CCCEEEEeCCCcchHH
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRE-L---GSR--GAIPM--DSTALSFCDEN---SIPVVVFNLLEPGNIS 69 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e-~---~~~--g~~~~--d~~a~~la~~~---gi~v~I~ng~~~~~i~ 69 (88)
+||.|+++|||||||++ |++++|++++..| + .+. ..++| ++.|++.|.+. +.+++|++ ++.+.
T Consensus 213 ~Ad~Li~lTdV~GV~~~---~~~~~i~~i~~~e~~~~l~~~~~~tGGM~~Kl~aa~~a~~~v~~g~~v~I~~---~~~ll 286 (307)
T 3zzh_A 213 EPLKIVYLNEKGGIING---STGEKISMINLDEEYDDLMKQSWVKYGTKLKIREIKELLDYLPRSSSVAIIN---VQDLQ 286 (307)
T ss_dssp CCSEEEEECSSCSCEET---TTTEECCEEEHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHSCTTCCEEEEC---GGGHH
T ss_pred CCCEEEEEeCCcceecC---CCCcCCcccCHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHhccCeEEEEeC---ccHHH
Confidence 58999999999999987 3589999999854 2 222 45677 56666655543 88999998 77764
Q ss_pred -HhhcCCCceeEEecCCCC
Q 035510 70 -KAICGDQVGTFIDRTGRM 87 (88)
Q Consensus 70 -~~l~g~~~GT~i~~~~~~ 87 (88)
.++.++..||+|.+..++
T Consensus 287 ~elft~~g~GT~I~~~~~~ 305 (307)
T 3zzh_A 287 KELFTDSGAGTMIRRGYKL 305 (307)
T ss_dssp HHHHSCCCCSEEEECCC--
T ss_pred HHHhcCCCCcEEEecCCcc
Confidence 456788899999987665
No 40
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=99.13 E-value=6.1e-11 Score=88.21 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=63.7
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHH-HHh---hC--CCCcc--hHHHHHHHHhCCCCEEEEeCCCcchHHHh-
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFR-ELG---SR--GAIPM--DSTALSFCDENSIPVVVFNLLEPGNISKA- 71 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~-e~~---~~--g~~~~--d~~a~~la~~~gi~v~I~ng~~~~~i~~~- 71 (88)
+||.|+++|||||||++ ++++|++++.. |+. +. ..++| ++.|+..|.+...+++++++..|+.+...
T Consensus 223 ~Ad~LiilTdv~Gv~~~----~~~lI~~i~~~~e~~~l~~~~~~tGGM~~Kl~aa~~a~~gv~~v~iv~g~~~~~Ll~eL 298 (460)
T 3s6g_A 223 QPYKVVFLTGTGGLLDE----DGDILSSINLATDFGDLMQADWVNGGMRLKLEEIKRLLDDLPLSSSVSITRPSELAREL 298 (460)
T ss_dssp CCSEEEEECSSCSCBCT----TSSBCCEEEHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHTSCTTCEEEEECGGGHHHHH
T ss_pred CCCEEEEEeCCccccCC----CCeecceeCcHHHHHHHHhcCCCCCcHHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHH
Confidence 58999999999999985 47799999874 432 22 45677 67887777775447899999999998754
Q ss_pred hcCCCceeEEecCCC
Q 035510 72 ICGDQVGTFIDRTGR 86 (88)
Q Consensus 72 l~g~~~GT~i~~~~~ 86 (88)
+.++.+||+|.+..+
T Consensus 299 ft~~g~GT~i~~~e~ 313 (460)
T 3s6g_A 299 FTHAGSGTLIRRGER 313 (460)
T ss_dssp HSSCCSSEEEECCCC
T ss_pred hcCCCCceEEEcCCc
Confidence 567889999988643
No 41
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=99.11 E-value=1.3e-10 Score=81.55 Aligned_cols=66 Identities=24% Similarity=0.273 Sum_probs=53.7
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHHHhh---C--CCCcc--hHHHHHHHHhCCCC-EEEEeCCCcchHHHhh
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRELGS---R--GAIPM--DSTALSFCDENSIP-VVVFNLLEPGNISKAI 72 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e~~~---~--g~~~~--d~~a~~la~~~gi~-v~I~ng~~~~~i~~~l 72 (88)
+||.|+++|||||||+ ++++|++++++|+.+ . ..++| ++.|+..|.++|++ ++|+|++..
T Consensus 205 ~Ad~LiilTDVdGV~~-----d~~~I~~i~~~e~~~l~~~~~~tGGM~~Kl~aa~~a~~~Gv~~v~I~~~~~~------- 272 (279)
T 3l86_A 205 AADKLILMTNVKGVLE-----NGAVLEKITSHQVQEKIDTAVITAGMIPKIESAAKTVAAGVGQVLIGDNLLT------- 272 (279)
T ss_dssp TCSEEEEECSSSSCEE-----TTEECCEEEGGGSHHHHHTTSSCTTHHHHHHHHHHHHHTTCSEEEEESSSSC-------
T ss_pred CCCEEEEEeCCCcccc-----CCEehhhccHHHHHHHHhCCCCcCcHHHHHHHHHHHHHcCCCEEEEeccCCC-------
Confidence 5999999999999996 378999998876543 2 45677 78999999999998 999997643
Q ss_pred cCCCceeEEec
Q 035510 73 CGDQVGTFIDR 83 (88)
Q Consensus 73 ~g~~~GT~i~~ 83 (88)
||+|..
T Consensus 273 -----GT~i~~ 278 (279)
T 3l86_A 273 -----GTLITA 278 (279)
T ss_dssp -----SEEEEC
T ss_pred -----CeEEec
Confidence 898864
No 42
>4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A*
Probab=99.06 E-value=3.9e-10 Score=83.98 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=59.1
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHHH----HhhC--CCCcc--hHHHHHHHHhC---CCCEEEEeCCCcchHH
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFRE----LGSR--GAIPM--DSTALSFCDEN---SIPVVVFNLLEPGNIS 69 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~e----~~~~--g~~~~--d~~a~~la~~~---gi~v~I~ng~~~~~i~ 69 (88)
+||.|+++|||||||++ |++++|++++..| +.+. ..++| ++.|++.|.+. +.+++|++ ++.+.
T Consensus 213 ~Ad~Li~lTdV~GV~~~---~~~~lI~~it~~e~~~~li~~~~~tgGM~pKl~aa~aa~~~v~~g~~v~I~~---~~~ll 286 (464)
T 4ab7_A 213 EPLKIVYLNEKGGIING---STGEKISMINLDEEYDDLMKQSWVKYGTKLKIREIKELLDYLPRSSSVAIIN---VQDLQ 286 (464)
T ss_dssp CCSEEEEEESSCSEECT---TTCCEECEEEHHHHHHHHHTCSSCCHHHHHHHHHHHHHHTTSCTTCEEEEEE---STTHH
T ss_pred CCCEEEEEecccccccC---CCCcCCcccCHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhcccCcEEEEec---ChHHH
Confidence 58999999999999997 3588999999864 2222 45667 56677777654 78899998 55555
Q ss_pred -HhhcCCCceeEEecC
Q 035510 70 -KAICGDQVGTFIDRT 84 (88)
Q Consensus 70 -~~l~g~~~GT~i~~~ 84 (88)
.++.++..||+|.+.
T Consensus 287 ~eLft~~g~GT~I~~~ 302 (464)
T 4ab7_A 287 KELFTDSGAGTMIRRG 302 (464)
T ss_dssp HHTTSSSTTSEEEECC
T ss_pred HHHhcCCCCceEEecC
Confidence 455688899999875
No 43
>3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV}
Probab=98.97 E-value=1.1e-10 Score=87.06 Aligned_cols=82 Identities=16% Similarity=0.177 Sum_probs=63.1
Q ss_pred CCcEEEEeeccCeecCCCCCCCceeeeccCHH-H---HhhC--CCCcc--hHHHHHHHHhCCCCEEEEeCCCcchHHHh-
Q 035510 1 HAEVVLKGTNVDGVYDCHSRDNNATFEHISFR-E---LGSR--GAIPM--DSTALSFCDENSIPVVVFNLLEPGNISKA- 71 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~~dP~~~a~~i~~i~~~-e---~~~~--g~~~~--d~~a~~la~~~gi~v~I~ng~~~~~i~~~- 71 (88)
+||.|+++|||||||+.| +++|++++.. | +.+. ..++| ++.|+..|.+.+.+++++++..|+.+...
T Consensus 226 ~Ad~LiilTdv~Gv~~~~----~~lI~~i~~~~e~~~l~~~~~~tGGM~~Kl~aa~~a~~gv~~~~iv~g~~~~~Ll~eL 301 (467)
T 3s6k_A 226 QPYKIIFLTGTGGLLDAE----GKLIDSINLSTEYDHLMQQPWINGGMRVKIEQIKDLLDRLPLESSVSITRPADLAKEL 301 (467)
T ss_dssp CCSSCCCCCSSCSCCCSS----CCCCCCCCTTTTTHHHHTSSSCCSHHHHHHHHHHHHHTTSCSSCCBCCCCTTTHHHHH
T ss_pred CCCEEEEEecccceeCCC----CCCccccChHHHHHHHHhcCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCchHHHHHH
Confidence 589999999999999853 6788888763 3 2222 46677 67888777775557899999999998765
Q ss_pred hcCCCceeEEecCCC
Q 035510 72 ICGDQVGTFIDRTGR 86 (88)
Q Consensus 72 l~g~~~GT~i~~~~~ 86 (88)
+.++.+||+|.+..+
T Consensus 302 ft~~g~GT~i~~~e~ 316 (467)
T 3s6k_A 302 FTHKGSGTLVRRGER 316 (467)
T ss_dssp HSSCTTSCCBCCCCC
T ss_pred hcCCCcceEEeCCCc
Confidence 567889999987644
No 44
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=93.12 E-value=0.19 Score=31.99 Aligned_cols=56 Identities=14% Similarity=0.201 Sum_probs=32.4
Q ss_pred EEeeccCeecCCCCC---CCceeeeccCHHHHhhCCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 6 LKGTNVDGVYDCHSR---DNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 6 i~~tdVdGvy~~dP~---~~a~~i~~i~~~e~~~~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
++++||||+.+..-. ++.+.+...+.. |..+++.+++.|+++.|++++ .....+++
T Consensus 11 liv~D~DGtL~d~~~~~~~~g~~~~~f~~~----------D~~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~ 69 (168)
T 3ewi_A 11 LLVCNIDGCLTNGHIYVSGDQKEIISYDVK----------DAIGISLLKKSGIEVRLISER--ACSKQTLS 69 (168)
T ss_dssp EEEEECCCCCSCSCCBCCSSCCCEEEEEHH----------HHHHHHHHHHTTCEEEEECSS--CCCHHHHH
T ss_pred EEEEeCccceECCcEEEcCCCCEEEEEecC----------cHHHHHHHHHCCCEEEEEeCc--HHHHHHHH
Confidence 456899999986432 223333333322 334666667777777777776 34444444
No 45
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=89.12 E-value=0.78 Score=28.66 Aligned_cols=58 Identities=21% Similarity=0.267 Sum_probs=31.7
Q ss_pred EEeeccCeecCCCCC---CCceeeeccCHHHHhhCCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 6 LKGTNVDGVYDCHSR---DNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 6 i~~tdVdGvy~~dP~---~~a~~i~~i~~~e~~~~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
+++.|+||....... ++.+.+..+... +..+++.+++.|+++.|+++.....+..++.
T Consensus 10 ~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~----------~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~ 70 (180)
T 1k1e_A 10 FVITDVDGVLTDGQLHYDANGEAIKSFHVR----------DGLGIKMLMDADIQVAVLSGRDSPILRRRIA 70 (180)
T ss_dssp EEEEECTTTTSCSEEEEETTEEEEEEEEHH----------HHHHHHHHHHTTCEEEEEESCCCHHHHHHHH
T ss_pred EEEEeCCCCcCCCCeeeccCcceeeeeccc----------hHHHHHHHHHCCCeEEEEeCCCcHHHHHHHH
Confidence 346799998864221 223333333322 2245555566677777777666555555443
No 46
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=86.61 E-value=1.5 Score=26.51 Aligned_cols=12 Identities=33% Similarity=0.379 Sum_probs=9.2
Q ss_pred EEeeccCeecCC
Q 035510 6 LKGTNVDGVYDC 17 (88)
Q Consensus 6 i~~tdVdGvy~~ 17 (88)
+++.|+||....
T Consensus 11 ~v~~DlDGTL~~ 22 (162)
T 2p9j_A 11 LLIMDIDGVLTD 22 (162)
T ss_dssp EEEECCTTTTSC
T ss_pred EEEEecCcceEC
Confidence 356799999874
No 47
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=80.46 E-value=3.6 Score=25.73 Aligned_cols=27 Identities=7% Similarity=0.059 Sum_probs=14.3
Q ss_pred HHHHHHhCCCCEEEEeCCCcchHHHhh
Q 035510 46 ALSFCDENSIPVVVFNLLEPGNISKAI 72 (88)
Q Consensus 46 a~~la~~~gi~v~I~ng~~~~~i~~~l 72 (88)
+++.+++.|+++.|+++.....+...+
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l 87 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRC 87 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHH
Confidence 444445556666666655544444443
No 48
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=77.64 E-value=8.5 Score=24.19 Aligned_cols=28 Identities=11% Similarity=0.166 Sum_probs=17.3
Q ss_pred HHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 46 ALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 46 a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
+++.+++.|+++.|+++.....+...+.
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~ 81 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRME 81 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHH
Confidence 5566666777777777665555555443
No 49
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=77.23 E-value=8.6 Score=23.74 Aligned_cols=55 Identities=5% Similarity=0.126 Sum_probs=27.9
Q ss_pred eeccCeecCCCCC---CCceeeeccCHHHHhhCCCCcchHHHHHHHHhCCCCEEEEeCCCcchHHHhh
Q 035510 8 GTNVDGVYDCHSR---DNNATFEHISFRELGSRGAIPMDSTALSFCDENSIPVVVFNLLEPGNISKAI 72 (88)
Q Consensus 8 ~tdVdGvy~~dP~---~~a~~i~~i~~~e~~~~g~~~~d~~a~~la~~~gi~v~I~ng~~~~~i~~~l 72 (88)
+-|.||......- ...+.+......+ ..+++.+++.|+++.|+++.....+..++
T Consensus 16 ifD~DGTL~d~~~~~~~~~~~~~~~~~~~----------~~~l~~L~~~g~~~~i~T~~~~~~~~~~~ 73 (176)
T 3mmz_A 16 VLDFDGTQTDDRVLIDSDGREFVSVHRGD----------GLGIAALRKSGLTMLILSTEQNPVVAARA 73 (176)
T ss_dssp EECCTTTTSCSCCEECTTCCEEEEEEHHH----------HHHHHHHHHTTCEEEEEESSCCHHHHHHH
T ss_pred EEeCCCCcCcCCEeecCCccHhHhccccc----------HHHHHHHHHCCCeEEEEECcChHHHHHHH
Confidence 4599999876332 1223333332221 11444445566666666665555555444
No 50
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=76.64 E-value=5 Score=25.15 Aligned_cols=28 Identities=0% Similarity=0.044 Sum_probs=19.9
Q ss_pred HHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 46 ALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 46 a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
+++.+++.|+++.|+++.....+..++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~ 81 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAK 81 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHH
Confidence 6666677788888888777666666554
No 51
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=73.36 E-value=6.7 Score=23.51 Aligned_cols=28 Identities=11% Similarity=0.194 Sum_probs=16.1
Q ss_pred HHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 46 ALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 46 a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
+++.+++.|+++.|+++........++.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~ 66 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAE 66 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHH
Confidence 4555556666666666655555555443
No 52
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=71.01 E-value=11 Score=23.93 Aligned_cols=31 Identities=6% Similarity=0.053 Sum_probs=20.6
Q ss_pred hHHHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 43 DSTALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 43 d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
|..+++.+++.|+++.|+++.....+..+++
T Consensus 57 d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~ 87 (195)
T 3n07_A 57 DGYGVKALMNAGIEIAIITGRRSQIVENRMK 87 (195)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCHHHHHHHH
T ss_pred cHHHHHHHHHCCCEEEEEECcCHHHHHHHHH
Confidence 4445666677777777777776666665554
No 53
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=62.48 E-value=15 Score=23.74 Aligned_cols=28 Identities=7% Similarity=0.003 Sum_probs=19.7
Q ss_pred HHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 46 ALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 46 a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
+++.+++.|+++.|+++.....+..++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~ 111 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRAN 111 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHH
Confidence 5666677788888887776666666554
No 54
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=52.26 E-value=19 Score=24.92 Aligned_cols=44 Identities=14% Similarity=0.203 Sum_probs=31.7
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHhhcCCCceeEEecCCCC
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKAICGDQVGTFIDRTGRM 87 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~~~GT~i~~~~~~ 87 (88)
..|.++....|+|++|++-.---..++.+..+..|-+|.+-.+|
T Consensus 81 ~~ARE~l~~~~iP~IvI~D~p~~K~kd~l~~~g~GYIivk~DpM 124 (283)
T 1qv9_A 81 SKAREMLADSEYPAVIIGDAPGLKVKDEMEEQGLGYILVKPDAM 124 (283)
T ss_dssp HHHHHHHHTSSSCEEEEEEGGGGGGHHHHHHTTCEEEEETTSCC
T ss_pred hHHHHHHHhCCCCEEEEcCCcchhhHHHHHhcCCcEEEEecCcc
Confidence 35677778899999988743333356778777889988876665
No 55
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=44.95 E-value=22 Score=23.26 Aligned_cols=29 Identities=3% Similarity=-0.115 Sum_probs=23.9
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
.+++-+++.|+++.|++|+....+.+.+.
T Consensus 28 ~~l~~l~~~g~~~~iaTGR~~~~~~~~l~ 56 (246)
T 3f9r_A 28 ALIKRARGAGFCVGTVGGSDFAKQVEQLG 56 (246)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHC
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHhh
Confidence 45677788899999999999888877765
No 56
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=44.63 E-value=24 Score=23.22 Aligned_cols=30 Identities=13% Similarity=0.128 Sum_probs=23.0
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
..+++-+++.|+++.|++|+....+..++.
T Consensus 32 ~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~ 61 (275)
T 1xvi_A 32 APWLTRLREANVPVILCSSKTSAEMLYLQK 61 (275)
T ss_dssp HHHHHHHHHTTCCEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Confidence 456666677899999999998877776654
No 57
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=40.36 E-value=43 Score=21.30 Aligned_cols=29 Identities=24% Similarity=0.427 Sum_probs=21.7
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
.+++-+.+.|+.+.+++|+.+..+...+.
T Consensus 29 ~al~~l~~~G~~~~iaTGR~~~~~~~~~~ 57 (274)
T 3fzq_A 29 HAIRLCQKNHCSVVICTGRSMGTIQDDVL 57 (274)
T ss_dssp HHHHHHHHTTCEEEEECSSCTTTSCHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCChHHHHHHHH
Confidence 45555677899999999988877776654
No 58
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=40.02 E-value=32 Score=22.61 Aligned_cols=29 Identities=10% Similarity=0.079 Sum_probs=22.6
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
.+++-+++.|+.+.+++|+....+..++.
T Consensus 29 ~aL~~l~~~Gi~vviaTGR~~~~~~~~~~ 57 (282)
T 1rkq_A 29 NAIAAARARGVNVVLTTGRPYAGVHNYLK 57 (282)
T ss_dssp HHHHHHHHTTCEEEEECSSCGGGTHHHHH
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 45666678899999999998887776654
No 59
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=39.91 E-value=25 Score=22.55 Aligned_cols=29 Identities=3% Similarity=-0.031 Sum_probs=21.9
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
.+++-+++.|+++.|++|+.+..+..++.
T Consensus 29 ~~l~~l~~~g~~~~i~TGr~~~~~~~~~~ 57 (227)
T 1l6r_A 29 ESIRSAEKKGLTVSLLSGNVIPVVYALKI 57 (227)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEECCCCcHHHHHHHH
Confidence 45555677899999999998877776654
No 60
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=37.98 E-value=28 Score=21.38 Aligned_cols=12 Identities=17% Similarity=0.116 Sum_probs=8.4
Q ss_pred EEeeccCeecCC
Q 035510 6 LKGTNVDGVYDC 17 (88)
Q Consensus 6 i~~tdVdGvy~~ 17 (88)
+++.|+||-.-.
T Consensus 5 ~i~~DlDGTL~~ 16 (142)
T 2obb_A 5 TIAVDFDGTIVE 16 (142)
T ss_dssp EEEECCBTTTBC
T ss_pred EEEEECcCCCCC
Confidence 456799996643
No 61
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=36.79 E-value=45 Score=18.54 Aligned_cols=24 Identities=17% Similarity=0.152 Sum_probs=13.1
Q ss_pred HHHHHhCCCCEEEEeCCCcchHHH
Q 035510 47 LSFCDENSIPVVVFNLLEPGNISK 70 (88)
Q Consensus 47 ~~la~~~gi~v~I~ng~~~~~i~~ 70 (88)
++.+++.|+++.|+++.....+..
T Consensus 27 l~~L~~~G~~~~i~S~~~~~~~~~ 50 (137)
T 2pr7_A 27 LAAAKKNGVGTVILSNDPGGLGAA 50 (137)
T ss_dssp HHHHHHTTCEEEEEECSCCGGGGH
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHH
Confidence 334455677776666655444333
No 62
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=34.53 E-value=39 Score=21.38 Aligned_cols=28 Identities=14% Similarity=0.090 Sum_probs=19.6
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhh
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAI 72 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l 72 (88)
.+++-+++.|+++.+++|+.+..+..++
T Consensus 27 ~al~~l~~~G~~v~i~TGR~~~~~~~~~ 54 (231)
T 1wr8_A 27 EAIRRAESLGIPIMLVTGNTVQFAEAAS 54 (231)
T ss_dssp HHHHHHHHTTCCEEEECSSCHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEcCCChhHHHHHH
Confidence 4455556778888888888776666554
No 63
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=34.13 E-value=23 Score=23.07 Aligned_cols=29 Identities=10% Similarity=-0.100 Sum_probs=22.1
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
.+++-+++.|+++.|++|+.+..+...+.
T Consensus 28 ~al~~l~~~G~~~~iaTGR~~~~~~~~~~ 56 (271)
T 1rlm_A 28 AQYQELKKRGIKFVVASGNQYYQLISFFP 56 (271)
T ss_dssp HHHHHHHHHTCEEEEECSSCHHHHGGGCT
T ss_pred HHHHHHHHCCCEEEEEeCCcHHHHHHHHH
Confidence 45555677799999999998877776654
No 64
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=33.10 E-value=49 Score=21.55 Aligned_cols=28 Identities=11% Similarity=0.013 Sum_probs=20.5
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhh
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAI 72 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l 72 (88)
.|++-+++.|+.+.|++|+.+..+..++
T Consensus 45 ~al~~l~~~G~~v~iaTGR~~~~~~~~~ 72 (285)
T 3pgv_A 45 ETLKLLTARGINFVFATGRHYIDVGQIR 72 (285)
T ss_dssp HHHHHHHTTTCEEEEECSSCGGGGHHHH
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 4555667778888888888877777665
No 65
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=31.75 E-value=32 Score=23.06 Aligned_cols=28 Identities=18% Similarity=0.008 Sum_probs=21.3
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhh
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAI 72 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l 72 (88)
.+++-+++.|+.+.|++|+....+..++
T Consensus 52 ~al~~l~~~Gi~v~iaTGR~~~~~~~~~ 79 (301)
T 2b30_A 52 DAIKEAIEKGYMVSICTGRSKVGILSAF 79 (301)
T ss_dssp HHHHHHHHHTCEEEEECSSCHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHh
Confidence 4555567779999999999877776665
No 66
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=31.52 E-value=81 Score=19.13 Aligned_cols=28 Identities=14% Similarity=0.163 Sum_probs=22.8
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHh
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKA 71 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~ 71 (88)
+.+++.|++.|++++.+.......+.+.
T Consensus 104 ~~~~~~ak~~g~~vi~IT~~~~s~l~~~ 131 (187)
T 3sho_A 104 VAALAGAAERGVPTMALTDSSVSPPARI 131 (187)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCcchhh
Confidence 5778999999999998887766667664
No 67
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=31.43 E-value=42 Score=22.19 Aligned_cols=35 Identities=9% Similarity=0.211 Sum_probs=27.0
Q ss_pred CCCCcc--hHHHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 37 RGAIPM--DSTALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 37 ~g~~~~--d~~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
.|...+ +....++|++.|++.+.+.+ .+.+.+++.
T Consensus 153 ~G~~vVVG~~~~~~~A~~~Gl~~vlI~s--~eSI~~Ai~ 189 (225)
T 2pju_A 153 NGTEAVVGAGLITDLAEEAGMTGIFIYS--AATVRQAFS 189 (225)
T ss_dssp TTCCEEEESHHHHHHHHHTTSEEEESSC--HHHHHHHHH
T ss_pred CCCCEEECCHHHHHHHHHcCCcEEEECC--HHHHHHHHH
Confidence 366654 78889999999999887774 578877764
No 68
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=31.30 E-value=31 Score=22.21 Aligned_cols=28 Identities=0% Similarity=-0.108 Sum_probs=19.1
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhh
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAI 72 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l 72 (88)
.+++-+++.|+++.|++|+....+..++
T Consensus 24 ~~l~~l~~~g~~~~i~Tgr~~~~~~~~~ 51 (249)
T 2zos_A 24 PIIEELKDMGFEIIFNSSKTRAEQEYYR 51 (249)
T ss_dssp HHHHHHHHTTEEEEEBCSSCHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence 3455556778888888888776666554
No 69
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=31.18 E-value=79 Score=19.10 Aligned_cols=28 Identities=7% Similarity=0.239 Sum_probs=22.6
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHh
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKA 71 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~ 71 (88)
+.+++.|++.|++++.+.......+.+.
T Consensus 113 ~~~~~~ak~~g~~vi~IT~~~~s~la~~ 140 (183)
T 2xhz_A 113 TALIPVLKRLHVPLICITGRPESSMARA 140 (183)
T ss_dssp HHHHHHHHTTTCCEEEEESCTTSHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCChhHHh
Confidence 5778999999999998887766666664
No 70
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=29.88 E-value=63 Score=20.57 Aligned_cols=29 Identities=7% Similarity=0.238 Sum_probs=19.1
Q ss_pred HHHHHHHHhCCCCEEEEeC---CCcchHHHhh
Q 035510 44 STALSFCDENSIPVVVFNL---LEPGNISKAI 72 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng---~~~~~i~~~l 72 (88)
..|++.+++.|++++++.| +.+..+...+
T Consensus 28 ~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l 59 (266)
T 3pdw_A 28 CEFVRTLKDRGVPYLFVTNNSSRTPKQVADKL 59 (266)
T ss_dssp HHHHHHHHHTTCCEEEEESCCSSCHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 3567777888999988877 4444444433
No 71
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=29.84 E-value=50 Score=21.20 Aligned_cols=29 Identities=17% Similarity=0.011 Sum_probs=21.1
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
.+++-+.+.|+.+.+++|+....+..++.
T Consensus 29 ~al~~l~~~G~~~~iaTGR~~~~~~~~~~ 57 (279)
T 4dw8_A 29 ETLIRIQEQGIRLVLASGRPTYGIVPLAN 57 (279)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence 45555567788888888888777766653
No 72
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=29.73 E-value=55 Score=20.83 Aligned_cols=28 Identities=4% Similarity=-0.031 Sum_probs=18.6
Q ss_pred HHHHHHHhCCCCEEEEeCC---CcchHHHhh
Q 035510 45 TALSFCDENSIPVVVFNLL---EPGNISKAI 72 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~---~~~~i~~~l 72 (88)
.|++.+++.|++++++.|+ .+..+.+.+
T Consensus 31 ~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l 61 (268)
T 3qgm_A 31 EGVKKLKELGKKIIFVSNNSTRSRRILLERL 61 (268)
T ss_dssp HHHHHHHHTTCEEEEEECCSSSCHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEEeCcCCCCHHHHHHHH
Confidence 4667778889998888883 344444444
No 73
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=28.76 E-value=54 Score=21.41 Aligned_cols=29 Identities=21% Similarity=0.096 Sum_probs=20.6
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
.+++.+++.|+++.+++|+....+..++.
T Consensus 28 ~al~~l~~~G~~~~iaTGR~~~~~~~~~~ 56 (288)
T 1nrw_A 28 NALRQAQRDGIEVVVSTGRAHFDVMSIFE 56 (288)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHG
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHH
Confidence 34555567788888888887777766654
No 74
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=28.57 E-value=51 Score=21.48 Aligned_cols=30 Identities=13% Similarity=-0.021 Sum_probs=22.9
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
..+++-+++.|+.+.+++|+....+..++.
T Consensus 45 ~~al~~l~~~G~~v~iaTGR~~~~~~~~~~ 74 (283)
T 3dao_A 45 MSVIDRLIDKGIIFVVCSGRQFSSEFKLFA 74 (283)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHTG
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 345666677899999999998888777654
No 75
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=28.29 E-value=62 Score=20.57 Aligned_cols=28 Identities=11% Similarity=0.010 Sum_probs=17.8
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhh
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAI 72 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l 72 (88)
.+++-+++.|+++.++.|+....+..++
T Consensus 27 ~al~~l~~~G~~~~~aTGR~~~~~~~~~ 54 (258)
T 2pq0_A 27 EAVRRLKQSGVYVAIATGRAPFMFEHVR 54 (258)
T ss_dssp HHHHHHHHTTCEEEEECSSCGGGSHHHH
T ss_pred HHHHHHHHCCCEEEEECCCChHHHHHHH
Confidence 3455556677777777777666555443
No 76
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=28.14 E-value=72 Score=19.68 Aligned_cols=29 Identities=14% Similarity=0.252 Sum_probs=23.5
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHhh
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKAI 72 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~l 72 (88)
+.+++.|++.|++++.+.+.....+.+.+
T Consensus 130 i~~~~~ak~~g~~vI~IT~~~~s~La~~~ 158 (199)
T 1x92_A 130 IQAIQAAHDREMLVVALTGRDGGGMASLL 158 (199)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHHHHHHC
T ss_pred HHHHHHHHHCCCEEEEEECCCCCcHHhcc
Confidence 67899999999999988877666776653
No 77
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=28.08 E-value=34 Score=22.70 Aligned_cols=30 Identities=17% Similarity=0.228 Sum_probs=23.6
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
..+.+.+.++|++++|++|.....+..+++
T Consensus 147 ~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~ 176 (297)
T 4fe3_A 147 ENFFGKLQQHGIPVFIFSAGIGDVLEEVIR 176 (297)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEeCCcHHHHHHHHH
Confidence 356778889999999999977776666654
No 78
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=26.47 E-value=92 Score=19.03 Aligned_cols=28 Identities=14% Similarity=0.150 Sum_probs=22.2
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHh
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKA 71 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~ 71 (88)
+.+++.|++.|++++.+.......+.+.
T Consensus 133 ~~~~~~ak~~g~~vI~IT~~~~s~L~~~ 160 (198)
T 2xbl_A 133 LAAFREAKAKGMTCVGFTGNRGGEMREL 160 (198)
T ss_dssp HHHHHHHHHTTCEEEEEECSCCCTHHHH
T ss_pred HHHHHHHHHCCCeEEEEECCCCCcHHHh
Confidence 5788999999999988877766666664
No 79
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=26.28 E-value=96 Score=19.66 Aligned_cols=24 Identities=17% Similarity=0.250 Sum_probs=18.8
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchH
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNI 68 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i 68 (88)
.+++-+++.|+.+.+++|+....+
T Consensus 37 ~al~~l~~~G~~~~iaTGR~~~~~ 60 (268)
T 3r4c_A 37 DALKKVHDSGIKIVIATGRAASDL 60 (268)
T ss_dssp HHHHHHHHTTCEEEEECSSCTTCC
T ss_pred HHHHHHHHCCCEEEEEcCCChHHh
Confidence 456666788999999999876665
No 80
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=25.70 E-value=41 Score=21.60 Aligned_cols=29 Identities=17% Similarity=0.097 Sum_probs=22.1
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
..+++-+++.| .++|++|+.+..+...+.
T Consensus 29 ~~al~~l~~~g-~v~iaTGR~~~~~~~~~~ 57 (239)
T 1u02_A 29 LSLISDLKERF-DTYIVTGRSPEEISRFLP 57 (239)
T ss_dssp HHHHHHHHHHS-EEEEECSSCHHHHHHHSC
T ss_pred HHHHHHHhcCC-CEEEEeCCCHHHHHHHhc
Confidence 34556667778 999999998888887764
No 81
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=25.27 E-value=69 Score=20.51 Aligned_cols=29 Identities=14% Similarity=0.070 Sum_probs=21.3
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
.+++-+.+.|+.+.+++|+.+..+..++.
T Consensus 29 ~al~~l~~~G~~~~iaTGR~~~~~~~~~~ 57 (279)
T 3mpo_A 29 DAVQAAKAQGIKVVLCTGRPLTGVQPYLD 57 (279)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 45555577788988888888777776654
No 82
>1sc3_B Interleukin-1 beta convertase; malonate-bound caspase-1, hydrolase; 1.80A {Homo sapiens} SCOP: c.17.1.1 PDB: 1ice_B 1bmq_B* 1rwm_B* 1rwk_B* 1rwo_B* 1rwp_B* 1rwv_B* 1rww_B* 1rwn_B* 1sc1_B 1rwx_B 1sc4_B 2h4y_B* 2hbq_B* 2hbr_B* 3ns7_B* 3d6f_B* 3d6h_B* 3d6m_B* 2h4w_B* ...
Probab=24.54 E-value=39 Score=18.99 Aligned_cols=16 Identities=0% Similarity=-0.031 Sum_probs=14.4
Q ss_pred CCcEEEEeeccCeecC
Q 035510 1 HAEVVLKGTNVDGVYD 16 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~ 16 (88)
.||.|+..+.++|-++
T Consensus 8 ~aDfL~~yST~pG~~S 23 (88)
T 1sc3_B 8 EKDFIAFCSSTPDNVS 23 (88)
T ss_dssp SCSEEEEESSCTTBCC
T ss_pred CCCEEEEEeCCCCCEe
Confidence 4899999999999987
No 83
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=24.51 E-value=1.1e+02 Score=18.48 Aligned_cols=28 Identities=11% Similarity=-0.002 Sum_probs=21.8
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHh
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKA 71 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~ 71 (88)
+.+++.|++.|++++.+.......+.+.
T Consensus 96 ~~~~~~ak~~g~~vi~IT~~~~s~l~~~ 123 (186)
T 1m3s_A 96 IHTAAKAKSLHGIVAALTINPESSIGKQ 123 (186)
T ss_dssp HHHHHHHHHTTCEEEEEESCTTSHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECCCCCchHHh
Confidence 5678999999999988877666666553
No 84
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=24.48 E-value=60 Score=19.68 Aligned_cols=29 Identities=7% Similarity=-0.020 Sum_probs=19.4
Q ss_pred HHHHHHHhCCCCEEEEeCCC-cchHHHhhc
Q 035510 45 TALSFCDENSIPVVVFNLLE-PGNISKAIC 73 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~-~~~i~~~l~ 73 (88)
.+++.+++.|+++.|+++.. ...+..++.
T Consensus 75 e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~ 104 (187)
T 2wm8_A 75 EVLKRLQSLGVPGAAASRTSEIEGANQLLE 104 (187)
T ss_dssp HHHHHHHHHTCCEEEEECCSCHHHHHHHHH
T ss_pred HHHHHHHHCCceEEEEeCCCChHHHHHHHH
Confidence 44555567788888888776 355655554
No 85
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=24.45 E-value=74 Score=19.53 Aligned_cols=28 Identities=11% Similarity=0.204 Sum_probs=22.1
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHh
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKA 71 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~ 71 (88)
+.+++.|++.|++++.+.+.....+.+.
T Consensus 126 i~~~~~ak~~g~~vI~IT~~~~s~la~~ 153 (196)
T 2yva_A 126 VKAVEAAVTRDMTIVALTGYDGGELAGL 153 (196)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHHHHTT
T ss_pred HHHHHHHHHCCCEEEEEeCCCCchhhhc
Confidence 6789999999999998887766666554
No 86
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=24.19 E-value=85 Score=19.97 Aligned_cols=35 Identities=11% Similarity=0.019 Sum_probs=24.5
Q ss_pred CCCCcc--hHHHHHHHHhCCCCEEEEeCCCcchHHHhh
Q 035510 37 RGAIPM--DSTALSFCDENSIPVVVFNLLEPGNISKAI 72 (88)
Q Consensus 37 ~g~~~~--d~~a~~la~~~gi~v~I~ng~~~~~i~~~l 72 (88)
.|...+ +....++|++.|++.+.+.. ..+.+.+++
T Consensus 141 ~G~~vvVG~~~~~~~A~~~Gl~~vli~s-g~eSI~~Ai 177 (196)
T 2q5c_A 141 ENIKIVVSGKTVTDEAIKQGLYGETINS-GEESLRRAI 177 (196)
T ss_dssp TTCCEEEECHHHHHHHHHTTCEEEECCC-CHHHHHHHH
T ss_pred CCCeEEECCHHHHHHHHHcCCcEEEEec-CHHHHHHHH
Confidence 466654 78889999999999665542 255666665
No 87
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=22.97 E-value=64 Score=20.67 Aligned_cols=29 Identities=14% Similarity=0.283 Sum_probs=16.9
Q ss_pred HHHHHHHhCCCCEEEEe---CCCcchHHHhhc
Q 035510 45 TALSFCDENSIPVVVFN---LLEPGNISKAIC 73 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~n---g~~~~~i~~~l~ 73 (88)
.|++.+++.|+++++++ ++....+...+.
T Consensus 28 eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~ 59 (264)
T 3epr_A 28 RFIERLQEKGIPYMLVTNNTTRTPESVQEMLR 59 (264)
T ss_dssp HHHHHHHHHTCCEEEEECCCSSCHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence 34555566677777777 444444544443
No 88
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=22.87 E-value=59 Score=20.96 Aligned_cols=29 Identities=14% Similarity=0.112 Sum_probs=20.4
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhhc
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAIC 73 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l~ 73 (88)
.+++-+.+.|+.+.+++|+.+..+..++.
T Consensus 30 ~al~~l~~~G~~~~iaTGR~~~~~~~~~~ 58 (290)
T 3dnp_A 30 DAIEYVKKKGIYVTLVTNRHFRSAQKIAK 58 (290)
T ss_dssp HHHHHHHHTTCEEEEBCSSCHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEECCCChHHHHHHHH
Confidence 44555567788888888888777766553
No 89
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=22.67 E-value=89 Score=19.51 Aligned_cols=28 Identities=7% Similarity=-0.008 Sum_probs=22.3
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHh
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKA 71 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~ 71 (88)
+.+++.|++.|++++.+.......+.+.
T Consensus 106 i~~~~~ak~~g~~vI~IT~~~~s~La~~ 133 (200)
T 1vim_A 106 VNISKKAKDIGSKLVAVTGKRDSSLAKM 133 (200)
T ss_dssp HHHHHHHHHHTCEEEEEESCTTSHHHHH
T ss_pred HHHHHHHHHCCCeEEEEECCCCChHHHh
Confidence 5788999999999998887766666654
No 90
>2ql9_B Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_B* 2ql5_B* 2qlb_B* 2qlf_B 2qlj_B* 3edr_B 3ibc_B 3ibf_B 1i51_B
Probab=22.64 E-value=44 Score=18.94 Aligned_cols=20 Identities=20% Similarity=0.343 Sum_probs=16.4
Q ss_pred CCcEEEEeeccCeecC-CCCC
Q 035510 1 HAEVVLKGTNVDGVYD-CHSR 20 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~-~dP~ 20 (88)
.||.|+..+.++|-+. .||.
T Consensus 10 ~aDfL~~yST~pG~~S~R~~~ 30 (97)
T 2ql9_B 10 EADFLFAYSTVPGYYSWRSPG 30 (97)
T ss_dssp TTTEEEEESSCTTBCCEEETT
T ss_pred CCCEEEEEeCCCCcEeeecCC
Confidence 4899999999999997 4553
No 91
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=22.28 E-value=72 Score=20.58 Aligned_cols=27 Identities=7% Similarity=-0.252 Sum_probs=19.2
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHhh
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKAI 72 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~l 72 (88)
.+++- ++.|+++.+++|+.+..+..++
T Consensus 26 ~al~~-~~~Gi~v~iaTGR~~~~~~~~~ 52 (268)
T 1nf2_A 26 RNIEK-LSRKCYVVFASGRMLVSTLNVE 52 (268)
T ss_dssp HHHHH-HTTTSEEEEECSSCHHHHHHHH
T ss_pred HHHHH-HhCCCEEEEECCCChHHHHHHH
Confidence 34555 6678888888888777766654
No 92
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=22.06 E-value=53 Score=19.75 Aligned_cols=17 Identities=12% Similarity=0.219 Sum_probs=11.0
Q ss_pred hHHHHHHHHhCCCCEEE
Q 035510 43 DSTALSFCDENSIPVVV 59 (88)
Q Consensus 43 d~~a~~la~~~gi~v~I 59 (88)
-..+.+.+.+.||.++.
T Consensus 86 G~~a~~~L~~~GI~v~~ 102 (136)
T 1o13_A 86 GRRAIAAFEAMGVKVIK 102 (136)
T ss_dssp CHHHHHHHHHTTCEEEC
T ss_pred CHHHHHHHHHCCCEEEe
Confidence 34556666777777765
No 93
>1pyo_B Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 2p2c_B 3r5j_B 3r6g_B 3r7b_B 3r7n_B 3r7s_B 3r6l_B
Probab=21.74 E-value=46 Score=19.24 Aligned_cols=20 Identities=5% Similarity=0.184 Sum_probs=16.5
Q ss_pred CCcEEEEeeccCeecC-CCCC
Q 035510 1 HAEVVLKGTNVDGVYD-CHSR 20 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~-~dP~ 20 (88)
.||.|+..+.++|-+. .||.
T Consensus 14 ~aDfL~~yST~pG~~S~R~~~ 34 (105)
T 1pyo_B 14 RSDMICGYACLKGTAAMRNTK 34 (105)
T ss_dssp SCSEEEEESSCTTBCCEEETT
T ss_pred CCCEEEEEeCCCCcEEEecCC
Confidence 4899999999999997 4554
No 94
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=21.54 E-value=88 Score=19.73 Aligned_cols=40 Identities=10% Similarity=0.017 Sum_probs=27.8
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHhhcCCCceeEEecC
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKAICGDQVGTFIDRT 84 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~l~g~~~GT~i~~~ 84 (88)
+.+++.|++.|++++.+.+.....+.+..... --++..|.
T Consensus 131 ~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~-d~~l~~~~ 170 (201)
T 3trj_A 131 LSAVEEAHDLEMKVIALTGGSGGALQNMYNTD-DIELRVPS 170 (201)
T ss_dssp HHHHHHHHHTTCEEEEEEETTCCGGGGTCCTT-CEEEEESC
T ss_pred HHHHHHHHHCCCcEEEEECCCCCHHHHhhccC-CEEEEeCC
Confidence 57899999999999988887777776653221 23455554
No 95
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=21.25 E-value=84 Score=19.04 Aligned_cols=28 Identities=18% Similarity=0.074 Sum_probs=21.2
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcchHHHh
Q 035510 44 STALSFCDENSIPVVVFNLLEPGNISKA 71 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~~i~~~ 71 (88)
+.+++.|++.|++++.+.+.....+.+.
T Consensus 127 ~~~~~~ak~~g~~vi~iT~~~~s~L~~~ 154 (188)
T 1tk9_A 127 LEALKKAKELNMLCLGLSGKGGGMMNKL 154 (188)
T ss_dssp HHHHHHHHHTTCEEEEEEEGGGTTHHHH
T ss_pred HHHHHHHHHCCCEEEEEeCCCCcchHHc
Confidence 5789999999999887776655555554
No 96
>1l7l_A PA-I galactophilic lectin; agglutinin, single wavelength anomalous scattering phasing, structural genomics, PSI; 1.50A {Pseudomonas aeruginosa} SCOP: b.18.1.16 PDB: 1oko_A* 1uoj_A 2vxj_A* 2wyf_A* 3zyh_A* 3zyb_A* 3zyf_A*
Probab=20.62 E-value=37 Score=20.55 Aligned_cols=16 Identities=25% Similarity=0.424 Sum_probs=12.9
Q ss_pred cEEEEeeccCeecCCC
Q 035510 3 EVVLKGTNVDGVYDCH 18 (88)
Q Consensus 3 d~li~~tdVdGvy~~d 18 (88)
++++++.|++|.|..|
T Consensus 93 elillf~D~pg~y~dN 108 (121)
T 1l7l_A 93 AITLIYNDVPGTYGNN 108 (121)
T ss_dssp EEEEEECCCTTCGGGC
T ss_pred eEEEEEeCCCCcccCC
Confidence 4678889999999764
No 97
>2dko_B Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 2c2k_B* 2c2m_B* 2c2o_B* 2c1e_B* 2cdr_B* 2cnk_B* 2cnl_B* 2cnn_B* 2cno_B* 2cjy_B 1pau_B 1re1_B* 1rhk_B* 1rhm_B* 1rhq_B* 1rhr_B* 1rhu_B* 1rhj_B* 1i3o_B* 3edq_B ...
Probab=20.60 E-value=51 Score=18.97 Aligned_cols=16 Identities=19% Similarity=0.380 Sum_probs=14.4
Q ss_pred CCcEEEEeeccCeecC
Q 035510 1 HAEVVLKGTNVDGVYD 16 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~ 16 (88)
.||.|+..+.++|-+.
T Consensus 16 ~aDfL~~yST~pG~vS 31 (103)
T 2dko_B 16 EADFLYAYSTAPGYYS 31 (103)
T ss_dssp TTTEEEEESSCTTBCC
T ss_pred CCCEEEEEeCCCCcEe
Confidence 4899999999999986
No 98
>3rjm_B Caspase-2; caspase-2, caspase, hydrolase-hydrolase inhibitor; HET: 3PX; 2.55A {Homo sapiens}
Probab=20.36 E-value=48 Score=19.75 Aligned_cols=16 Identities=6% Similarity=0.162 Sum_probs=14.5
Q ss_pred CCcEEEEeeccCeecC
Q 035510 1 HAEVVLKGTNVDGVYD 16 (88)
Q Consensus 1 ~ad~li~~tdVdGvy~ 16 (88)
.||.|+.++.|+|-++
T Consensus 15 eADfL~~yST~pGyvS 30 (117)
T 3rjm_B 15 RSDMICGYACLKGTAA 30 (117)
T ss_dssp SCSEEEEESSCTTCCC
T ss_pred ccCEEEEEcCCCCeEC
Confidence 4899999999999987
No 99
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=20.28 E-value=1.2e+02 Score=17.50 Aligned_cols=23 Identities=9% Similarity=-0.016 Sum_probs=17.9
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcc
Q 035510 44 STALSFCDENSIPVVVFNLLEPG 66 (88)
Q Consensus 44 ~~a~~la~~~gi~v~I~ng~~~~ 66 (88)
..+++.+.+.|+++.|++|+...
T Consensus 30 ~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 30 IEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp HHHHHHHHHTTCEEEEEECTTTT
T ss_pred HHHHHHHHhCCCeEEEEeCCChh
Confidence 45566667889999999998764
No 100
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=20.27 E-value=56 Score=20.89 Aligned_cols=26 Identities=12% Similarity=0.095 Sum_probs=19.1
Q ss_pred HHHHHHHhCCCCEEEEeCCCcchHHHh
Q 035510 45 TALSFCDENSIPVVVFNLLEPGNISKA 71 (88)
Q Consensus 45 ~a~~la~~~gi~v~I~ng~~~~~i~~~ 71 (88)
.+++.+++.|+.+.+++|+. ..+..+
T Consensus 27 ~al~~l~~~G~~~~iaTGR~-~~~~~~ 52 (261)
T 2rbk_A 27 EALEAAHAKGLKIFIATGRP-KAIINN 52 (261)
T ss_dssp HHHHHHHHTTCEEEEECSSC-GGGCCS
T ss_pred HHHHHHHHCCCEEEEECCCh-HHHHHH
Confidence 45666678899999999987 655444
Done!