RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 035513
(473 letters)
>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId:
5811]}
Length = 224
Score = 220 bits (563), Expect = 2e-70
Identities = 108/217 (49%), Positives = 154/217 (70%), Gaps = 1/217 (0%)
Query: 235 HDLCKIYSNVDVIVSTFQIRGMHTLIRDVTTTTHDFVFYADRLIRLVVEHGLGHLPFTEK 294
D+ + NV ++ T Q+R M T+IRD T +FVFYADRLIRL++E L LPF +K
Sbjct: 7 QDIITRFPNVVLMKQTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKK 66
Query: 295 QIITPTGSVYTGVVFCRRLCGISIIRSGESMENALRACCKGIKIGKILIHREGNSGR-QL 353
++ TP Y GV F ++CG+SI+R+GESME+ LRA C+G++IGKILI R+ + +L
Sbjct: 67 EVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLRAVCRGVRIGKILIQRDETTAEPKL 126
Query: 354 IYQKLPADISSRHVLLLDPILASGNSAVKAISLILSKGVPESNIIFLNLIAAPQGIHAIC 413
IY+KLPADI R V+LLDP+ A+ S KAI ++L GV E IIF+N++AAPQGI +
Sbjct: 127 IYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNILAAPQGIERVF 186
Query: 414 KRFPKIKIVTSEIDSSIDEHACVIPGMGEFGDRYFGT 450
K +PK+++VT+ +D ++ ++PG+G+FGDRYFGT
Sbjct: 187 KEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDRYFGT 223
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 200 bits (510), Expect = 2e-61
Identities = 43/276 (15%), Positives = 82/276 (29%), Gaps = 45/276 (16%)
Query: 30 KQPFVIGVAGGTASGKTTVCNMIISRLRDQ--RVVLVNQDSFYH--------SLTDEKLQ 79
K+ +I V G + +G +TV + R + + V + D+F+ L
Sbjct: 2 KKHPIISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHRFNRADMKAELDRRYAA 61
Query: 80 NLHDYNFDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHK----------RKQQSRLI 129
++ +A + + L + Y +
Sbjct: 62 GDATFSHFSYEANELKELERVFREYGETGQGRTRTYVHDDAEAARTGVAPGNFTDWRDFD 121
Query: 130 NPSDVFILEGILVLH---DPRVRDLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLD 186
+ S + EG+ + + L +KI V ++ ++I RD RG E V D
Sbjct: 122 SDSHLLFYEGLHGAVVNSEVNIAGLADLKIGVVPVINLEWIQKIHRDRATRGYTTEAVTD 181
Query: 187 QYARFVKPSFEEFILPSKKYADIIIPRGGDNDVAIDLIVQHILTKLGQHDLCKI------ 240
R ++ I+P DI R D + I + I T + +
Sbjct: 182 VILR-RMHAYVHCIVPQFSQTDINFQRVPVVDTSNPFIARWIPTADESVVVIRFRNPRGI 240
Query: 241 ---------------YSNVDVIVSTFQIRGMHTLIR 261
+N V+ M ++
Sbjct: 241 DFPYLTSMIHGSWMSRANSIVVPGNKLDLAMQLILT 276
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus
[TaxId: 1394]}
Length = 208
Score = 192 bits (488), Expect = 2e-59
Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 3/206 (1%)
Query: 246 VIVSTFQIRGMHTLIRDVTTTTHDFVFYADRLIRLVVEHGLGHLPFTEKQIITPTGSVYT 305
+ I+ T IRD T T +F D + L+ LP E +I TP
Sbjct: 4 YVFDHPLIQHKLTYIRDKNTGTKEFRELVDEVATLMAFEITRDLPLEEVEIETPVSKARA 63
Query: 306 GVVFCRRLCGISIIRSGESMENALRACCKGIKIGKILIHREGNSGR-QLIYQKLPADISS 364
V+ ++L I I+R+G M + + K+G I ++R+ + + Y KLP+D+
Sbjct: 64 KVIAGKKLGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDPQTLKPVEYYVKLPSDVEE 123
Query: 365 RHVLLLDPILASGNSAVKAISLILSKGVPESNIIFLNLIAAPQGIHAICKRFPKIKIVTS 424
R +++DP+LA+G SAV AI + +G +I F+ LIAAP+G+ A+ P + I +
Sbjct: 124 RDFIIVDPMLATGGSAVAAIDALKKRGAK--SIKFMCLIAAPEGVKAVETAHPDVDIYIA 181
Query: 425 EIDSSIDEHACVIPGMGEFGDRYFGT 450
+D +++H ++PG+G+ GDR FGT
Sbjct: 182 ALDERLNDHGYIVPGLGDAGDRLFGT 207
>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus
[TaxId: 274]}
Length = 208
Score = 186 bits (473), Expect = 4e-57
Identities = 60/199 (30%), Positives = 105/199 (52%), Gaps = 3/199 (1%)
Query: 253 IRGMHTLIRDVTTTTHDFVFYADRLIRLVVEHGLGHLPFTEKQIITPTGSVYTGVVFCRR 312
++ +RD T DF A+ + L+ + L E + TP V+ ++
Sbjct: 11 VQHKLAHLRDKRTGPKDFRELAEEVAMLMAYEAMRDLELEETTVETPIAPARVKVLSGKK 70
Query: 313 LCGISIIRSGESMENALRACCKGIKIGKILIHREGNSGRQ-LIYQKLPADISSRHVLLLD 371
L ++I+R+G M + ++G I ++R+ S Y KLP DI+ R LLD
Sbjct: 71 LALVAILRAGLVMVEGILKLVPHARVGHIGLYRDPESLNPVQYYIKLPPDIAERRAFLLD 130
Query: 372 PILASGNSAVKAISLILSKGVPESNIIFLNLIAAPQGIHAICKRFPKIKIVTSEIDSSID 431
P+LA+G SA A+SL+ +G + + + ++AAP+G+ I K P ++V + ID ++
Sbjct: 131 PMLATGGSASLALSLLKERG--ATGVKLMAILAAPEGLERIAKDHPDTEVVVAAIDERLN 188
Query: 432 EHACVIPGMGEFGDRYFGT 450
+H ++PG+G+ GDR +GT
Sbjct: 189 DHGYIVPGLGDAGDRIYGT 207
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 181 bits (460), Expect = 2e-55
Identities = 117/211 (55%), Positives = 152/211 (72%), Gaps = 9/211 (4%)
Query: 31 QPFVIGVAGGTASGKTTVCNMIISRL-------RDQRVVLVNQDSFYHSLTDEKLQNLHD 83
+PF+IGV+GGTASGK++VC I+ L R ++VV+++QDSFY LT E+
Sbjct: 1 EPFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSFYRVLTSEQKAKALK 60
Query: 84 --YNFDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGIL 141
+NFDHPDAFD EL+L ++++ G+ V IP YDF SH RK+++ + P+DV + EGIL
Sbjct: 61 GQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGIL 120
Query: 142 VLHDPRVRDLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFIL 201
+ VRDL MK+FVDTD+D RLSRR+ RD ERGRD+E +L QY FVKP+FEEF L
Sbjct: 121 AFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCL 180
Query: 202 PSKKYADIIIPRGGDNDVAIDLIVQHILTKL 232
P+KKYAD+IIPRG DN VAI+LIVQHI L
Sbjct: 181 PTKKYADVIIPRGADNLVAINLIVQHIQDIL 211
>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima
[TaxId: 2336]}
Length = 210
Score = 181 bits (460), Expect = 3e-55
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 4/210 (1%)
Query: 242 SNVDVIVSTFQIRGMHTLIRDVTTTTHDFVFYADRLIRLVVEHGLGHLPFTEKQIITPTG 301
N+ V+V I+ T++RD T +F + L+ HL E ++ TP
Sbjct: 3 KNL-VVVDHPLIKHKLTIMRDKNTGPKEFRELLREITLLLAYEATRHLKCEEVEVETPIT 61
Query: 302 SVYTGVVFCRRLCGISIIRSGESMENALRACCKGIKIGKILIHREGNSGRQ-LIYQKLPA 360
+ + + + I+R+G M + + +G I I+R+ + + Y KLP
Sbjct: 62 KTIGYRINDKDIVVVPILRAGLVMADGILELLPNASVGHIGIYRDPETLQAVEYYAKLPP 121
Query: 361 DISSRHVLLLDPILASGNSAVKAISLILSKGVPESNIIFLNLIAAPQGIHAICKRFPKIK 420
+ V LLDP+LA+G S++KAI ++ G I + LIAAP+G+ A+ K++ +K
Sbjct: 122 LNDDKEVFLLDPMLATGVSSIKAIEILKENGAK--KITLVALIAAPEGVEAVEKKYEDVK 179
Query: 421 IVTSEIDSSIDEHACVIPGMGEFGDRYFGT 450
I + +D +++H +IPG+G+ GDR F T
Sbjct: 180 IYVAALDERLNDHGYIIPGLGDAGDRLFRT 209
>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 215
Score = 171 bits (434), Expect = 3e-51
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 247 IVSTFQIRGMHTLIRDVTTTTHDFVFYADRLIRLVVEHGLGHLPFTEKQIITPTGSVYTG 306
++ + T +RD T +F RL R++ L + ++ TP G G
Sbjct: 4 VIDKPITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNTLDYEIVEVETPLGVKTKG 63
Query: 307 VVFC--RRLCGISIIRSGESMENALRACCKGIKIGKILIHREGNSGRQ--------LIYQ 356
V + I+I+R+ + L + G I R G++ + Y+
Sbjct: 64 VDITDLNNIVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVPKDMDVYIYYK 123
Query: 357 KLPADISS-RHVLLLDPILASGNSAVKAISLILSKGVPESNIIFLNLIAAPQGIHAICKR 415
K+P + +V++ DP++A+ ++ +K + ++ I +++I++ G++ I +
Sbjct: 124 KIPDIRAKVDNVIIADPMIATASTMLKVLEEVVKANP--KRIYIVSIISSEYGVNKILSK 181
Query: 416 FPKIKIVTSEIDSSIDEHACVIPGMGEFGDRYFG 449
+P I + T ID ++ ++PG+G+ GDR FG
Sbjct: 182 YPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG 215
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 153 bits (388), Expect = 1e-43
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 36/225 (16%)
Query: 30 KQPFVIGVAGGTASGKTTVCNMIISRLR----DQRVVLVNQDSFYHSLTDEKLQNLHDYN 85
+ P++I +AG A GK+T ++ + L +RV L+ D F H K + L
Sbjct: 78 RIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLM-KK 136
Query: 86 FDHPDAFDTELLLSDMEKLKHGQA-VSIPDYDFKSHKR-KQQSRLINPSDVFILEGILVL 143
P+++D L+ + LK G V+ P Y + + + D+ ILEG+ VL
Sbjct: 137 KGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNVL 196
Query: 144 HDPR----------VRDLMSMKIFVDTDSDVRLSRRIQRDTVERG---RDIEDVLDQYA- 189
V D + I+VD D+ + I R R D + YA
Sbjct: 197 QSGMDYPHDPHHVFVSDFVDFSIYVDAPEDLLQTWYINRFLKFREGAFTDPDSYFHNYAK 256
Query: 190 ---------------RFVKPSFEEFILPSKKYADIIIPRGGDNDV 219
+ ++ ILP+++ A +I+ + ++ V
Sbjct: 257 LTKEEAIKTAMTLWKEINWLNLKQNILPTRERASLILTKSANHAV 301
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 108 bits (270), Expect = 4e-28
Identities = 36/189 (19%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 26 TMPTKQPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYN 85
+ T V+G+ G + SGKTT+ N + LR+Q + + H + K + +
Sbjct: 16 AIKTAGRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNEE 75
Query: 86 ---FDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILV 142
+ + L +LK +++P YD ++ +++ ++ SD+ ++EG+ +
Sbjct: 76 WFEYYYLQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEGVFL 135
Query: 143 LHDPRVRDLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILP 202
R +++D ++R +R + ++I+ +++Y + + + E P
Sbjct: 136 QR-KEWRPFFDFVVYLDCPREIRFARENDQ----VKQNIQKFINRYWK-AEDYYLETEEP 189
Query: 203 SKKYADIII 211
K AD++
Sbjct: 190 -IKRADVVF 197
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 83.3 bits (205), Expect = 2e-18
Identities = 41/209 (19%), Positives = 77/209 (36%), Gaps = 27/209 (12%)
Query: 2 ETVIELADDFADDLSLQSASSESTTMPTKQPFVIGVAGGTASGKTTVCNMIISRLRDQ-- 59
+TV++ +F D + + + K P I +G SGK+ I + L ++
Sbjct: 2 KTVLDYTIEFLDKYIPEWFETGN-----KCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYG 56
Query: 60 ---RVVLVNQDSFYHSLTDEKLQNLHDYNF------DHPDAFDTELLLSDMEKLK----- 105
+ + D FY + D+ N N P D +LL + +
Sbjct: 57 GEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLLQGRGLPGTHDMKLLQEVLNTIFNNNEH 116
Query: 106 -HGQAVSIPDYDFKSHKRKQQS-----RLINPSDVFILEGILVLHDPRVRDLMSMKIFVD 159
V +P YD K + ++ P D+FILEG + +P ++ + + +
Sbjct: 117 PDQDTVVLPKYDKSQFKGEGDRCPTGQKIKLPVDIFILEGWFLGFNPILQGIENNDLLTG 176
Query: 160 TDSDVRLSRRIQRDTVERGRDIEDVLDQY 188
DV D + R +I+ + +
Sbjct: 177 DMVDVNAKLFFYSDLLWRNPEIKSLGIVF 205
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 70.0 bits (170), Expect = 2e-14
Identities = 26/190 (13%), Positives = 62/190 (32%), Gaps = 13/190 (6%)
Query: 30 KQPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFY----HSLTDEKLQNLHDYN 85
QPF + + G SGKTT N D ++ + + +L + ++ +
Sbjct: 7 TQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPKKWA 66
Query: 86 FDHPDAFDTELLLSDMEKLKHGQAVSIPDY---DFKSHKRKQQSRLINPSDVFILEGILV 142
+L S + + + +++ + LE
Sbjct: 67 MPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYK 126
Query: 143 LHDPRVRDLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLD-QYARFVKPSFEEFIL 201
+ + + I++ T +V R Q R R E + +Y + + E++++
Sbjct: 127 FIEESIHVQADLIIYLRTSPEVAYERIRQ-----RARSEESCVPLKYLQELHELHEDWLI 181
Query: 202 PSKKYADIII 211
++ +
Sbjct: 182 HQRRPQSCKV 191
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 61.0 bits (147), Expect = 2e-11
Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 24/207 (11%)
Query: 32 PFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEK------LQNLHDYN 85
+++G+ GG SGKTT+ N+ D V LV+ D + + +
Sbjct: 2 TYIVGLTGGIGSGKTTIANL----FTDLGVPLVDADVVAREVVAKDSPLLSKIVEHFGAQ 57
Query: 86 FDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHD 145
L + + + + + + + + +L + + L + +L +
Sbjct: 58 ILTEQGELNRAALRERVFNHDEDKLWLNNLLHPAIRERMKQKLAEQTAPYTLFVVPLLIE 117
Query: 146 PRVRDLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKK 205
++ L + VD +L+R QRD + + Q ++ + K
Sbjct: 118 NKLTALCDRILVVDVSPQTQLARSAQRDNNNFEQIQRIMNSQVSQQER----------LK 167
Query: 206 YADIIIPRGGDNDVAIDLIVQHILTKL 232
+AD +I +ND + + H+ K+
Sbjct: 168 WADDVI----NNDAELAQNLPHLQQKV 190
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 60.7 bits (146), Expect = 2e-11
Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 24/208 (11%)
Query: 30 KQPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHP 89
K P +IG+ G SGK+TV + LR +++ D+ + K + L +
Sbjct: 1 KHPIIIGITGNIGSGKSTVAAL----LRSWGYPVLDLDALAARARENKEEELKRLFPEAV 56
Query: 90 DAFDTELLLSD--MEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPR 147
+ + + + + + + LE L L +
Sbjct: 57 VGGRLDRRALARLVFSDPERLKALEAVVHPEVRRLLMEELSRLEAPLVFLEIPL-LFEKG 115
Query: 148 VRDLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYA 207
+ + V + R+ R + R + R + Q K +K A
Sbjct: 116 WEGRLHGTLLVAAPLEERVRRVMARSGLSREEVLARERAQMPEEEK----------RKRA 165
Query: 208 DIIIPRGGDNDVAIDLI---VQHILTKL 232
++ +N +++ + ++ +L +L
Sbjct: 166 TWVL----ENTGSLEDLERALKAVLAEL 189
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 58.3 bits (140), Expect = 2e-10
Identities = 36/210 (17%), Positives = 75/210 (35%), Gaps = 27/210 (12%)
Query: 32 PFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDE------KLQNLHDYN 85
+++ + GG SGK+TV N D + +++ D + + + + N
Sbjct: 3 RYIVALTGGIGSGKSTVANA----FADLGINVIDADIIARQVVEPGAPALHAIADHFGAN 58
Query: 86 FDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHD 145
D L + + + +++ Q ++ + ++L + +L +
Sbjct: 59 MIAADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQATSPYVLWVVPLLVE 118
Query: 146 PRVRDLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKK 205
+ + + VD + +L R +QRD V R + + Q R +
Sbjct: 119 NSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQATREAR----------LA 168
Query: 206 YADIIIPRGGDNDVAIDLI---VQHILTKL 232
AD +I DN+ A D I V +
Sbjct: 169 VADDVI----DNNGAPDAIASDVARLHAHY 194
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 58.1 bits (139), Expect = 2e-10
Identities = 29/197 (14%), Positives = 67/197 (34%), Gaps = 12/197 (6%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQ--RVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDA 91
V+ V G G TT + + LR + +V+ S + E+
Sbjct: 3 VVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMR---- 58
Query: 92 FDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDL 151
++ ++++ I + +S ++ ++ +
Sbjct: 59 ---KMDPETQKRIQKMAGRKIAEMAKESPVAVDTHSTVSTPKGYLPG---LPSWVLNELN 112
Query: 152 MSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADIII 211
+ I V+T D L RR+ +T R D ++Q+ + + + + + I+
Sbjct: 113 PDLIIVVETTGDEILMRRMSDETRVRDLDTASTIEQHQFMNRCAAMSYGVLTGATVKIVQ 172
Query: 212 PRGGDNDVAIDLIVQHI 228
R G D A++ + +
Sbjct: 173 NRNGLLDQAVEELTNVL 189
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 41.9 bits (98), Expect = 1e-04
Identities = 20/207 (9%), Positives = 54/207 (26%), Gaps = 38/207 (18%)
Query: 25 TTMPTKQPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLV-------NQDSFYHSLTDEK 77
+ M T I + G GK+T ++ S L + F +
Sbjct: 1 SHMVT--IVRIYLDGVYGIGKSTTGRVMASAASGGSPTLYFPEPMAYWRTLFETDVISGI 58
Query: 78 LQNLHDYNFDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFIL 137
+ + D L+ + + + + D+ R P +
Sbjct: 59 YDTQNRKQQGNLAVDDAALITAHYQSRFTTPYLILHDHTCTLFGGNSLQRGTQPDLTLVF 118
Query: 138 E---------------GILVLHDPRVRDLMSM---------KIFVDTDSDVRLSRRIQRD 173
+ + + + +++ + + + + RR++
Sbjct: 119 DRHPVASTVCFPAARYLLGDMSMCALMAMVATLPREPQGGNIVVTTLNVEEHI-RRLRT- 176
Query: 174 TVERGRDIEDVLDQYARFVKPSFEEFI 200
R R E + ++ + +
Sbjct: 177 ---RARIGEQIDITLIATLRNVYFMLV 200
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 41.5 bits (97), Expect = 1e-04
Identities = 24/210 (11%), Positives = 50/210 (23%), Gaps = 48/210 (22%)
Query: 27 MPTKQPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLV------NQDSFYHSLTDEKLQN 80
MPT + + G GKTT ++++ +V V +
Sbjct: 1 MPT--LLRVYIDGPHGMGKTTTTQLLVALGSRDDIVYVPEPMTYWRVLGASETIANIYTT 58
Query: 81 LHDYNFDHPDAFDT---------------ELLLSDMEKLKHGQAVSIPDYDFKSH----- 120
H + A D + + + G+A S
Sbjct: 59 QHRLDQGEISAGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEAGSSHAPPPALTLIFDR 118
Query: 121 ----------KRKQQSRLINPSDVFILEGILVLHDPRVRDLMSMKIFVDTDSDVRLSRRI 170
+ + P V ++ P + + D + R+
Sbjct: 119 HPIAALLCYPAARYLMGSMTPQAVLAFVALIPPTLP--GTNI---VLGALPEDRHI-DRL 172
Query: 171 QRDTVERGRDIEDVLDQYARFVKPSFEEFI 200
+ R R E + ++ +
Sbjct: 173 AK----RQRPGERLDLAMLAAIRRVYGLLA 198
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 39.3 bits (90), Expect = 2e-04
Identities = 19/161 (11%), Positives = 44/161 (27%), Gaps = 18/161 (11%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAFD 93
+I G SGK+T I++ +N+D + S+ + ++ + Y
Sbjct: 4 IILTIGCPGSGKSTWAREFIAKNPG--FYNINRDDYRQSIMAHEERDEYKYTKKKEGIVT 61
Query: 94 TELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDLMS 153
+ L G +V + +++ +
Sbjct: 62 GMQFDTAKSILYGGDSVKGVIISDTNLNPERRLAWE--------------TFAKEYGWKV 107
Query: 154 MKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKP 194
D + R +R + I+ + Y +
Sbjct: 108 EHKVFDVPWTELVKRNSKRG--TKAVPIDVLRSMYKSMREY 146
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 39.5 bits (91), Expect = 5e-04
Identities = 30/244 (12%), Positives = 61/244 (25%), Gaps = 48/244 (19%)
Query: 33 FVIGVAGGTASGKTTVCNMIISRLRDQRV---------VLVNQDSFYHSLTDEKLQNLHD 83
+I ++G SGK T + I+S + + F + L
Sbjct: 2 KLIFLSGVKRSGKDTTADFIMSNYSAVKYQLAGPIKDALAYAWGVFAANTDYPCLTRKEF 61
Query: 84 YNFDHPDAFDTELLLSDM-----EKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILE 138
D+ + L ++ + + S F ++S +
Sbjct: 62 EGIDYDRETNLNLTKLEVITIMEQAFCYLNGKSPIKGVFVFDDEGKESVNFVAFNKITDV 121
Query: 139 G-------------ILVLHDPRVRDLMSMKIFVDTDSDVRLSRRIQRDTV----ERGRDI 181
+ D V + M D D R
Sbjct: 122 INNIEDQWSVRRLMQALGTDLIVNNFDRMYWVKLFALDYLDKFNSGYDYYIVPDTRQDHE 181
Query: 182 EDVLD----QYARFVKPSFEEFILPS------KKYADIIIPRGGDNDVAIDLI---VQHI 228
D V+P + + D++I ND +++ + +++
Sbjct: 182 MDAARAMGATVIHVVRPGQKSNDTHITEAGLPIRDGDLVI----TNDGSLEELFSKIKNT 237
Query: 229 LTKL 232
L L
Sbjct: 238 LKVL 241
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 38.1 bits (87), Expect = 8e-04
Identities = 27/197 (13%), Positives = 52/197 (26%), Gaps = 25/197 (12%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAFD 93
+I + GG+++GK+ + + S L + + DS ++ + FD
Sbjct: 5 MIILNGGSSAGKSGIVRCLQSVL-PEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGVS 63
Query: 94 TELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDLMS 153
+E V++ + I V DL
Sbjct: 64 IGPEFRALEGAWAEGVVAMARAGARI---------IIDDVFLGGAAAQERWRSFVGDLDV 114
Query: 154 MKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADIIIPR 213
+ + V D V R R D+ A + D+ +
Sbjct: 115 LWVGVRCDGAVAEGRETARG------------DRVAGMAAKQAYVVHEGVE--YDVEVDT 160
Query: 214 GGDN-DVAIDLIVQHIL 229
I H++
Sbjct: 161 THKESIECAWAIAAHVV 177
>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426
(TTHA1462) {Thermus thermophilus [TaxId: 274]}
Length = 208
Score = 38.2 bits (88), Expect = 0.001
Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 350 GRQLIYQKLPADISSRHVLLLDPILASGNSAVKAISLILSKGVPESNIIFLNLIAAPQGI 409
+ + A R V+L+D +A+G S A+S++ +G ++ +A+P+ +
Sbjct: 106 AERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRR--VVVAVPVASPEAV 163
Query: 410 HAI 412
+
Sbjct: 164 ERL 166
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 38.2 bits (88), Expect = 0.001
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 26 TMPTKQPFVIGVAGGTASGKTTVCNMIISRLRDQ--RVVLVNQDSFYHSLTDEKLQNLHD 83
+P + PFVI V G +GKTT C + D+ VVL D+F + ++
Sbjct: 5 NVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGER 64
Query: 84 YNFDHPDAFD 93
+
Sbjct: 65 VGATVISHSE 74
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 37.8 bits (87), Expect = 0.001
Identities = 21/131 (16%), Positives = 38/131 (29%), Gaps = 16/131 (12%)
Query: 23 ESTTMPTKQPFVIGVAGGTASGKTTVCNMIISRLRDQ--RVVLV-----NQDSFYHSLTD 75
E +P K P+VI + G +GK T + + + +V LV +
Sbjct: 3 EPKVIPDKIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQL 62
Query: 76 EKLQNLHDYNFDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKR---------KQQS 126
+ + Y + L + I D + K
Sbjct: 63 GQQIGVPVYGEPGEKDVVGIAKRGVEKFLSEKMEIIIVDTAGRHGYGEEAALLEEMKNIY 122
Query: 127 RLINPSDVFIL 137
I P +V ++
Sbjct: 123 EAIKPDEVTLV 133
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 37.3 bits (85), Expect = 0.002
Identities = 18/201 (8%), Positives = 50/201 (24%), Gaps = 12/201 (5%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQ--RVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDA 91
+ V G GK+TV + L +Q ++N F + +
Sbjct: 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEM--RKL 60
Query: 92 FDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDL 151
+ ++ K + + + + PS V+ + +
Sbjct: 61 SVEKQKKLQIDAAKGIAEEARAGGEGYLFID-THAVIRTPSGYLPGLPSYVITEINPSVI 119
Query: 152 MSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADIII 211
++ + + + +AR+ + +I
Sbjct: 120 FLLEADPKIILSRQKRDTTRNRNDYSDESVILETINFARYAATASAVL----AGSTVKVI 175
Query: 212 PRGGDNDVAIDLIVQHILTKL 232
+ + + I+ +
Sbjct: 176 ---VNVEGDPSIAANEIIRSM 193
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 36.1 bits (82), Expect = 0.004
Identities = 27/202 (13%), Positives = 62/202 (30%), Gaps = 35/202 (17%)
Query: 31 QPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPD 90
+ I + G +GKT++ MI + L + + V + + E + + +
Sbjct: 4 KGINILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEY---DTELDTHIIE 60
Query: 91 AFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRD 150
D + LL ME + + + DY ++ ++
Sbjct: 61 EKDEDRLLDFMEPIMVSRGNHVVDYHSSELFPERWFHMVVVLHT---------------- 104
Query: 151 LMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADII 210
S L R+ + + E++ + + + DI+
Sbjct: 105 -----------STEVLFERLTKRQYSEAKRAENMEAEIQCICEEEARDAY-----EDDIV 148
Query: 211 IPRGGDNDVAIDLIVQHILTKL 232
+ R D + V+ I ++
Sbjct: 149 LVRENDTLEQMAATVEEIRERV 170
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 35.5 bits (80), Expect = 0.007
Identities = 27/203 (13%), Positives = 48/203 (23%), Gaps = 32/203 (15%)
Query: 30 KQPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHP 89
Q F I + G SGK + + L Q S L D L
Sbjct: 4 TQGFTIFLTGYMNSGKDAIARALQVTLNQQGG-----RSVSLLLGDTVRHELSSELGFTR 58
Query: 90 DAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVR 149
+ T + + +A + + + +
Sbjct: 59 EDRHTNIQRIAFVATELTRAGAAVIAAPIAPYEESRKF-------------------ARD 99
Query: 150 DLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADI 209
+ F L Q D + V +E + AD+
Sbjct: 100 AVSQAGSFFLVHVATPLEHCEQSDKRGIYAAARRGEIKGFTGVDDPYETP-----EKADL 154
Query: 210 IIPRGGDNDVAIDLIVQHILTKL 232
++ + + IV I+ L
Sbjct: 155 VVDFSKQS---VRSIVHEIILVL 174
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 35.4 bits (81), Expect = 0.011
Identities = 20/202 (9%), Positives = 43/202 (21%), Gaps = 42/202 (20%)
Query: 35 IGVAGGTASGKTTVCNMIISRLRDQRV--------VLVNQDSFYHSLTDEKLQNLHDYNF 86
I + G GKTT + + ++
Sbjct: 8 IYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGTQTRRLN 67
Query: 87 DHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINP---------SDVFIL 137
D + L + + +I + S L+ SD +
Sbjct: 68 GDVSPEDAQRLTAHFQ-SLFCSPHAIMHAKISALMDTSTSDLVQVNKEPYKIMLSDRHPI 126
Query: 138 EGILV----------LHDPRVRDLMSMK---------IFVDTDSDVRLSRRIQRDTVERG 178
+ + + L+ + R+ + R
Sbjct: 127 ASTICFPLSRYLVGDMSPAALPGLLFTLPAEPPGTNLVVCTVSLPS-HLSRVSK----RA 181
Query: 179 RDIEDVLDQYARFVKPSFEEFI 200
R E V + ++ + I
Sbjct: 182 RPGETVNLPFVMVLRNVYIMLI 203
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 35.0 bits (80), Expect = 0.011
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 29 TKQPFVIGVAGGTASGKTTVCNMIISRLRDQ--RVVLVNQDSFYHSLTDEKLQNLHDYNF 86
K PFVI + G GKTT + + Q V+L D+F + ++ N
Sbjct: 6 GKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNI 65
Query: 87 DHP 89
Sbjct: 66 PVI 68
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 33.7 bits (76), Expect = 0.021
Identities = 24/144 (16%), Positives = 39/144 (27%), Gaps = 20/144 (13%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQ--RVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDA 91
V V G SGKTT+ ++ + RV V H P+
Sbjct: 3 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG-------------HGGEPARPEG 49
Query: 92 FDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDL 151
D+ E+ D + H R+ RL + ++ L L
Sbjct: 50 VDSVR----HERAGAVATAVEGDGLLQLHLRRPLWRLDDVLALYA-PLRLDLVLVEGYKQ 104
Query: 152 MSMKIFVDTDSDVRLSRRIQRDTV 175
V S+ + +
Sbjct: 105 ERHPKVVLVRSEEDWASLQHLANI 128
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 34.2 bits (77), Expect = 0.023
Identities = 26/232 (11%), Positives = 71/232 (30%), Gaps = 32/232 (13%)
Query: 32 PFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFY----------------HSLTD 75
P + + G A GK+T ++ + V ++ +L D
Sbjct: 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGNQKACTAQSLGNLLD 61
Query: 76 EKLQNLHDYNF------------DHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRK 123
+ +++ + F +LL + ++V Y F + +
Sbjct: 62 MMYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFE 121
Query: 124 QQSRLINPSDVFILEGILVLHDPRVRDLMSMKIFVDTDSDVRLSR-RIQRDTVERGRDIE 182
S ++ +L + R + I++ V L R + E+G ++
Sbjct: 122 NGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKGIELA 181
Query: 183 ---DVLDQYARFVKPSFEEFILPSKKYADIIIPRGGDNDVAIDLIVQHILTK 231
+ Q+ ++ + + +++ D+ + ++ +
Sbjct: 182 YLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVNDDFSEEVTKQEDLMRE 233
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 33.4 bits (75), Expect = 0.033
Identities = 9/47 (19%), Positives = 15/47 (31%), Gaps = 2/47 (4%)
Query: 32 PFVIGVAGGTASGKTTVCNMIISRLRDQ--RVVLVNQDSFYHSLTDE 76
P +I + G A GKT + + L N + +
Sbjct: 2 PTLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKT 48
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 33.3 bits (75), Expect = 0.040
Identities = 34/206 (16%), Positives = 69/206 (33%), Gaps = 29/206 (14%)
Query: 30 KQPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNL-HDYNFDH 88
++ I + G +ASGK+T+ + +L R V Y D L D F
Sbjct: 22 QRGLTIWLTGLSASGKSTLAVELEHQLVRDRRV-----HAYRLDGDNIRFGLNKDLGFSE 76
Query: 89 PDAFDTELLLSDMEKLKHGQAV-SIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPR 147
D + ++++ KL +I + K + +R ++ E L +
Sbjct: 77 ADRNENIRRIAEVAKLFADSNSIAITSFISPYRKDRDTARQLHEVATPGEETGLPFVE-- 134
Query: 148 VRDLMSMKIFVDTDSDVRLSRRIQRDTVERGR-DIEDVLDQYARFVKPSFEEFILPSKKY 206
++VD +V R + + I++ A + P
Sbjct: 135 --------VYVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAP----------AN 176
Query: 207 ADIIIPRGGDN-DVAIDLIVQHILTK 231
++ + A+ I+ ++ TK
Sbjct: 177 PEVHVKNYELPVQDAVKQIIDYLDTK 202
>d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase
{Lactobacillus casei [TaxId: 1582]}
Length = 296
Score = 33.1 bits (74), Expect = 0.052
Identities = 17/151 (11%), Positives = 38/151 (25%), Gaps = 6/151 (3%)
Query: 28 PTKQPFVIGVAGGTASGKTTVCNMIISRLRDQ-RVVLVNQDSFYHSLTDEKLQNLHDYNF 86
P +Q I V G +GK + N I L V + F + + + D+
Sbjct: 35 PQQQGRYIHVTG--TNGKGSAANAIAHVLEASGLTVGLYTAPFIMRFNE---RIMIDHEP 89
Query: 87 DHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDP 146
A + + Q + + V + + +
Sbjct: 90 IPDAALVNAVAFVRAALERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGGD 149
Query: 147 RVRDLMSMKIFVDTDSDVRLSRRIQRDTVER 177
+ + +++ T+
Sbjct: 150 TDSTNVITPVVSVLTEVALDHQKLLGHTITA 180
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 33.0 bits (75), Expect = 0.056
Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 10/84 (11%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLR--------DQRVVLVNQDS--FYHSLTDEKLQNLHD 83
++ + G T SGKT++ +I+ L RV +Q S ++ + + +
Sbjct: 64 MLAITGSTGSGKTSLLMLILGELEASEGIIKHSGRVSFCSQFSWIMPGTIKENIIFGVSY 123
Query: 84 YNFDHPDAFDTELLLSDMEKLKHG 107
+ + L D+ K
Sbjct: 124 DEYRYKSVVKACQLQQDITKFAEQ 147
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 32.5 bits (73), Expect = 0.056
Identities = 22/176 (12%), Positives = 42/176 (23%), Gaps = 38/176 (21%)
Query: 23 ESTTMPTKQPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLH 82
ES+++ + P V+ G +GK+T + N
Sbjct: 5 ESSSLLSPNPEVVVAVGFPGAGKSTFIQEHLVSA------------------GYVHVNRD 46
Query: 83 DYNFDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILV 142
+ S L+ G+ V I + + R + + + V
Sbjct: 47 TLGSWQR------CVSSCQAALRQGKRVVIDNTNPDVPSRARYIQCAKDAGVPCRCFNFC 100
Query: 143 LHDPRVRDLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEE 198
+ R R D + +F P+ E
Sbjct: 101 ATIEQARH--------------NNRFREMTDPSHAPVSDMVMFSYRKQFEPPTLAE 142
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 31.9 bits (71), Expect = 0.080
Identities = 21/197 (10%), Positives = 47/197 (23%), Gaps = 31/197 (15%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAFD 93
+ + G GK+T C + ++L + D H + + +
Sbjct: 4 LYIITGPAGVGKSTTCKRLAAQLD--NSAYIEGDIINHMVVGGYR--PPWESDELLALTW 59
Query: 94 TELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDLMS 153
+ + L V + F + D +
Sbjct: 60 KNITDLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQ-----------------AKVDDVE 102
Query: 154 MKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADIIIPR 213
++ + + L RR R +D + E
Sbjct: 103 IRFIILWTNREELLRRDA----LRKKDEQMGERCLELV------EEFESKGIDERYFYNT 152
Query: 214 GGDNDVAIDLIVQHILT 230
++ IV+++ T
Sbjct: 153 SHLQPTNLNDIVKNLKT 169
>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase
TTHA1613 {Thermus thermophilus [TaxId: 274]}
Length = 174
Score = 31.9 bits (72), Expect = 0.081
Identities = 19/133 (14%), Positives = 43/133 (32%), Gaps = 7/133 (5%)
Query: 270 FVFYAD-RLIRLVVEHGLGHLPFTEKQIITP-TGSVYTGVVFCRRLCGISIIRSGESMEN 327
F D R E +P + + T T + V L ++
Sbjct: 28 VEFLGDPEFTRAAAEALRPLVPKEAEILFTTETSPIPLTHVLAEALGLPYVV-----ARR 82
Query: 328 ALRACCKGIKIGKILIHREGNSGRQLIYQKLPADISSRHVLLLDPILASGNSAVKAISLI 387
R + I ++ G + ++ + ++ V+L+ ++ASG + ++
Sbjct: 83 RRRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMV 142
Query: 388 LSKGVPESNIIFL 400
L G + +
Sbjct: 143 LRAGGHVVARLAV 155
>d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide
synthetase MurE {Escherichia coli [TaxId: 562]}
Length = 234
Score = 32.5 bits (72), Expect = 0.087
Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 28 PTKQPFVIGVAGGTASGKTTVCNMIISRLRDQ 59
P+ ++GV G +GKTT ++ +
Sbjct: 1 PSDNLRLVGVTG--TNGKTTTTQLLAQWSQLL 30
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 31.8 bits (71), Expect = 0.094
Identities = 9/74 (12%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAFD 93
++ ++G SGK+T+ + + V + D + + ++ +
Sbjct: 6 ILLLSGHPGSGKSTIAEALANLP-GVPKVHFHSDDLWGYIKHGRIDPWLPQSHQQNRMIM 64
Query: 94 TELLLSDMEKLKHG 107
K G
Sbjct: 65 QIAADVAGRYAKEG 78
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 31.8 bits (71), Expect = 0.10
Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 27/203 (13%)
Query: 35 IGVAGGTASGKTTVCNMIISRLRDQRVV---LVNQDSFYHSLTDEKLQNLHDYNFDHPDA 91
+ + G +GK T + +L ++ L ++ + + + D P
Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSD 62
Query: 92 FDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDL 151
EL+ + + Y + K ++ I D
Sbjct: 63 LTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDI-------------DA 109
Query: 152 MSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADIII 211
+ + RL R + D + I + + Y P E + + +
Sbjct: 110 VLEFRVSEEVLLERLKGRGRADDTD--DVILNRMKVYRDETAPLLEYY---RDQLKTV-- 162
Query: 212 PRGGDNDVAIDLIVQHILTKLGQ 234
D +D + L LG+
Sbjct: 163 ----DAVGTMDEVFARALRALGK 181
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 31.9 bits (71), Expect = 0.11
Identities = 17/149 (11%), Positives = 37/149 (24%), Gaps = 6/149 (4%)
Query: 27 MPTKQPFVIGVAGGTASGKTTVCNMIISRLR------DQRVVLVNQDSFYHSLTDEKLQN 80
M +P V+ V GG SGK T C I+ + Q +
Sbjct: 1 MEKSKPNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIK 60
Query: 81 LHDYNFDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGI 140
+ + + + + + + + ++ V +
Sbjct: 61 NGEIVPSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCP 120
Query: 141 LVLHDPRVRDLMSMKIFVDTDSDVRLSRR 169
+ R+ D + + R
Sbjct: 121 EEVMTQRLLKRGESSGRSDDNIESIKKRF 149
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 31.9 bits (71), Expect = 0.13
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQR-VVLVNQD 67
++ G SGKTT+ L D V VN D
Sbjct: 2 IVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLD 36
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 31.5 bits (70), Expect = 0.15
Identities = 25/204 (12%), Positives = 57/204 (27%), Gaps = 31/204 (15%)
Query: 35 IGVAGGTASGKTTVCNMIISRLRDQRVV---LVNQDSFYHSLTDEKLQNLHDYNFDHPDA 91
+ + G +GK T + R + ++ + + + + D D
Sbjct: 5 MVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDD 64
Query: 92 FDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDL 151
++ ++ + I D ++ + ++ + +
Sbjct: 65 IMVNMIKDELTNNPACKNGFILDGFPRTIPQAEKLD----------------QMLKEQGT 108
Query: 152 MSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADIII 211
K D L RI + R Y +P +F + +A +
Sbjct: 109 PLEKAIELKVDDELLVARITNADALKKRL-----AAYHAQTEP-IVDFYKKTGIWAGV-- 160
Query: 212 PRGGDNDVAIDLIVQHILTKLGQH 235
D + IL KLG++
Sbjct: 161 ----DASQPPATVWADILNKLGKN 180
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 31.1 bits (69), Expect = 0.15
Identities = 27/204 (13%), Positives = 47/204 (23%), Gaps = 37/204 (18%)
Query: 29 TKQPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDH 88
T+ F++G G G TTV + L ++
Sbjct: 2 TEPIFMVGARG---CGMTTVGRELARAL----------------------------GYEF 30
Query: 89 PDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRV 148
D S M A + Q+ V G+++L R
Sbjct: 31 VDTDIFMQHTSGMTVADVVAAEG-WPGFRRRESEALQAVATPNRVVATGGGMVLLEQNRQ 89
Query: 149 RDLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYAD 208
+ L+ R+Q R E + A
Sbjct: 90 FMRAHGTVVYLFAPAEELALRLQASLQAHQRPTLTGRPIAEEMEAV-LREREALYQDVAH 148
Query: 209 IIIPRGGDNDVAIDLIVQHILTKL 232
++ D IV ++ +
Sbjct: 149 YVV----DATQPPAAIVCELMQTM 168
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 31.7 bits (71), Expect = 0.17
Identities = 11/56 (19%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Query: 5 IELADDFADDLSLQSASSESTTMP-TKQPFVIGVAGGTASGKTTVCNMIISRLRDQ 59
+ L + S MP +GV G +GK+T L +
Sbjct: 26 MTLVESRHPRHQALSTQLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIRE 81
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 31.2 bits (69), Expect = 0.19
Identities = 28/209 (13%), Positives = 63/209 (30%), Gaps = 19/209 (9%)
Query: 35 IGVAGGTASGKTTVCNMIISRLRDQ--RVVLVNQDSFYHSLTDEKL-QNLHDYNFDHPDA 91
I + G +GK T+ + R V + + S+ + + LH + D +
Sbjct: 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASS 62
Query: 92 FDTELLL---------SDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILV 142
L ++ L G V I D S+ +RL + +
Sbjct: 63 VYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQR 122
Query: 143 LHDPRVRDLM-SMKIFVDTDSDVRLS--RRIQRDTVERGRDIEDVLDQYARFVKPSFEEF 199
+ R+ ++ + +++ R + R RD + + + + E
Sbjct: 123 IEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAEL 182
Query: 200 ILPSKKYADIIIPRGGDNDVAIDLIVQHI 228
+++ DV + +
Sbjct: 183 AAQGWGGRWLVV----GADVDPGRLAATL 207
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 30.9 bits (69), Expect = 0.24
Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 30 KQPFVIGVAGGTASGKTTVCNMIISRLRDQ--RVVLVNQDSFYHS 72
+ V+ V G GKTT + ++ +V+ D+F +
Sbjct: 4 PKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAA 48
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 31.3 bits (70), Expect = 0.27
Identities = 21/139 (15%), Positives = 40/139 (28%), Gaps = 6/139 (4%)
Query: 5 IELADDFADDLSLQSASSESTTMPTKQPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLV 64
IEL + SA S++ + V G T SGK++ N + ++
Sbjct: 29 IELRMRAGNIQLTNSAISDALKEIDSSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAK 88
Query: 65 N------QDSFYHSLTDEKLQNLHDYNFDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFK 118
+ + + D F + L M+ ++ + I FK
Sbjct: 89 TGVVEVTMERHPYKHPNIPNVVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFK 148
Query: 119 SHKRKQQSRLINPSDVFIL 137
+ + F
Sbjct: 149 KNDIDIAKAISMMKKEFYF 167
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 30.5 bits (67), Expect = 0.30
Identities = 27/201 (13%), Positives = 59/201 (29%), Gaps = 39/201 (19%)
Query: 33 FVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAF 92
F++G G +GK+T+ + +L + + + A
Sbjct: 6 FLVGPMG---AGKSTIGRQLAQQL------------------NMEFYDSDQEIEKRTGAD 44
Query: 93 DTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDLM 152
+ + E + ++ V G V L
Sbjct: 45 VGWVFDLEGE-----------EGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLS 93
Query: 153 SMKIFVDTDSDVR-LSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADIII 211
+ + V ++ + R QRD + R + V ++ E ++ AD+ I
Sbjct: 94 ARGVVVYLETTIEKQLARTQRD---KKRPLLHVETPPREVLEALANERNPLYEEIADVTI 150
Query: 212 PRGGDNDVAIDLIVQHILTKL 232
+D + ++ I+ L
Sbjct: 151 R---TDDQSAKVVANQIIHML 168
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId:
271]}
Length = 207
Score = 30.1 bits (67), Expect = 0.39
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 23 ESTTMPTKQPFVIGVAGGTASGKTTVCNMIISRLRDQ-RVVLVNQDSFYHSLTDEKLQ 79
E+ K + + G SGKTT + + + R L+ E+L+
Sbjct: 1 EARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLR 58
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 30.4 bits (67), Expect = 0.41
Identities = 22/236 (9%), Positives = 59/236 (25%), Gaps = 38/236 (16%)
Query: 35 IGVAGGTASGKTTVCNMIISRLRDQ-------------------RVVLVNQDSFYHSLTD 75
I + G A+GK+T N++ D L ++
Sbjct: 5 ISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNVLQ 64
Query: 76 EKLQNLHDYNFDHPD-AFDTELLLSDMEKLKHGQAVSIP----------DYDFKSHKRKQ 124
+ ++F A + + + P D + +
Sbjct: 65 MMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYE 124
Query: 125 QSRLINPSDVFILEGILVLHDPRVRDLMSMKIFVDTDSDVRLSRRIQRDTVERGRDI--- 181
+ + +++ + L I + RI + I
Sbjct: 125 SECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLE 184
Query: 182 --EDVLDQYARFVKPSFEEFILPSKKYADIIIPRGGDNDVAIDLIVQHILTKLGQH 235
E + ++ ++ + + I+ D + + ++ K+ +
Sbjct: 185 YLEKLHYKHESWLLHRTLKTNFDYLQEVPILTL---DVNEDFKDKYESLVEKVKEF 237
>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 178
Score = 29.7 bits (66), Expect = 0.44
Identities = 22/144 (15%), Positives = 39/144 (27%), Gaps = 13/144 (9%)
Query: 259 LIRDVTTTTHDFVFYADRLIRLVVEHGLGHLPFTE--KQIITPTGSVYTGVVFCRRLCGI 316
L D + + +LI H P + + + G L
Sbjct: 26 LFEDFLPIFRNPGLFQ-KLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGVG 84
Query: 317 SIIRSGESMENALRACCKGIKIGKILIHREGNSGRQLIYQKLPADISSRHVLLLDPILAS 376
+ E G L + A + +V+++D I+A+
Sbjct: 85 FVPVRKAGKLP----------GECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIAT 134
Query: 377 GNSAVKAISLILSKGVPESNIIFL 400
G SA A L+ F+
Sbjct: 135 GGSAAAAGELVEQLEANLLEYNFV 158
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 29.9 bits (66), Expect = 0.44
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQ 59
++ A + +GKTT+ +I L +
Sbjct: 4 LLAFAAWSGTGKTTLLKKLIPALCAR 29
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli
[TaxId: 562]}
Length = 224
Score = 30.0 bits (66), Expect = 0.51
Identities = 20/145 (13%), Positives = 32/145 (22%), Gaps = 9/145 (6%)
Query: 29 TKQPFVIGVAGGTASGKTTVCNMIISRLRDQ--RVVLV-----NQDSFYHSLTDEKLQNL 81
+K+ FV G T GKT ++ + R + L + L
Sbjct: 1 SKRYFVTGT--DTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALAL 58
Query: 82 HDYNFDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGIL 141
+ D H + L +D ++EG
Sbjct: 59 QRNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAG 118
Query: 142 VLHDPRVRDLMSMKIFVDTDSDVRL 166
P V L
Sbjct: 119 GWFTPLSDTFTFADWVTQEQLPVIL 143
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 30.0 bits (66), Expect = 0.56
Identities = 20/179 (11%), Positives = 48/179 (26%), Gaps = 3/179 (1%)
Query: 32 PFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDA 91
I + G +SGK+TV +I ++ + Y + T L+N
Sbjct: 3 TIQIAIDGPASSGKSTVAKIIAKDF---GFTYLDTGAMYRAATYMALKNQLGVEEVEALL 59
Query: 92 FDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDL 151
+ + + G + +H ++ + S + + + +++
Sbjct: 60 ALLDQHPISFGRSETGDQLVFVGDVDITHPIRENEVTNHVSAIAAIPEVREKLVSLQQEI 119
Query: 152 MSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADII 210
V D+ Q + D + + +I
Sbjct: 120 AQQGGIVMDGRDIGTVVLPQAELKIFLVASVDERAERRYKENIAKGIETDLETLKKEIA 178
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 29.5 bits (65), Expect = 0.58
Identities = 25/199 (12%), Positives = 54/199 (27%), Gaps = 22/199 (11%)
Query: 35 IGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAFDT 94
I + G +GK T I+ + T + L+ +
Sbjct: 3 IILLGAPVAGKGTQAQFIMEKY-----------GIPQISTGDMLRAAVKSGSELGKQAKD 51
Query: 95 ELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDLMSM 154
+ D KL + V + + + + L++ I + +
Sbjct: 52 IM---DAGKLVTDELVIALVKERIAQEDCRNGFLLDGFP----RTIPQADAMKEAGINVD 104
Query: 155 KIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADIIIPRG 214
+ D + RI +D E + L +Y + P + ++
Sbjct: 105 YVLEFDVPDELIVDRIVKDDQE--ETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVD 162
Query: 215 GDNDVAIDLIVQHILTKLG 233
G + + + LG
Sbjct: 163 GTKP--VAEVRADLEKILG 179
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB
{Methylobacterium extorquens [TaxId: 408]}
Length = 323
Score = 29.5 bits (65), Expect = 0.87
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 5 IELADDFADDLSLQSASSESTTMP-TKQPFVIGVAGGTASGKTTVCNMIISRLRDQ 59
I LA+ D +P T + +G+ G GK+T + + S L
Sbjct: 23 ITLAESRRADHRAAVRDLIDAVLPQTGRAIRVGITGVPGVGKSTTIDALGSLLTAA 78
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 29.2 bits (64), Expect = 0.93
Identities = 25/217 (11%), Positives = 54/217 (24%), Gaps = 30/217 (13%)
Query: 30 KQPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHP 89
+ P + G SGKT++ + I + +V ++ D+F ++ N + +
Sbjct: 30 ESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIV-IDNDTFK-----QQHPNFDELVKLYE 83
Query: 90 DAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVR 149
+ +
Sbjct: 84 KDV------VKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVP--------IQTAT 129
Query: 150 DLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADI 209
L + T+ER + AR K+ DI
Sbjct: 130 MLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATP----------KQAHDI 179
Query: 210 IIPRGGDNDVAIDLIVQHILTKLGQHDLCKIYSNVDV 246
++ N + +L + K+YS+++
Sbjct: 180 VVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSSLET 216
>d1gg4a4 c.72.2.1 (A:99-312) UDP-murNac-tripeptide
D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli
[TaxId: 562]}
Length = 214
Score = 29.3 bits (64), Expect = 0.93
Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
Query: 34 VIGVAGGTASGKTTVCNMI 52
V+ + G +SGKT+V M
Sbjct: 4 VVALTG--SSGKTSVKEMT 20
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 28.8 bits (63), Expect = 1.1
Identities = 23/194 (11%), Positives = 47/194 (24%), Gaps = 29/194 (14%)
Query: 30 KQPFVIGVAGGTASGKTTVCNMIISRLRDQ--RVVLV--------------NQDSFYHSL 73
++ +I + G +GK+T ++ L R L+ + +
Sbjct: 1 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 60
Query: 74 TDEKLQNLHDYNFDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSD 133
D + L N E L + + A S +
Sbjct: 61 EDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVG 120
Query: 134 VFILEGILVLHDPRVRDLMSMKIFVDTDSDVRLSRRIQRD-------------TVERGRD 180
+ + +L L + + R R V+ +
Sbjct: 121 LPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKS 180
Query: 181 IEDVLDQYARFVKP 194
IE V + +
Sbjct: 181 IEAVHEDIRVLSED 194
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 28.8 bits (63), Expect = 1.1
Identities = 26/197 (13%), Positives = 63/197 (31%), Gaps = 19/197 (9%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAFD 93
V+ ++G +A GK+TV + R+ + + + DY+F P F
Sbjct: 4 VVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPR----PGEVDGVDYHFIDPTRFQ 59
Query: 94 TELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDLMS 153
+ ++ + R + + L G + +
Sbjct: 60 QLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKT---MPEA 116
Query: 154 MKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADIIIPR 213
+ +F+ S L R+ + RG + DV+ + + + + +++
Sbjct: 117 VTVFLAPPSWQDLQARL----IGRGTETADVIQRRLD----TARIELAAQGDFDKVVV-- 166
Query: 214 GGDN-DVAIDLIVQHIL 229
+ A +V ++
Sbjct: 167 -NRRLESACAELVSLLV 182
>d2jfga3 c.72.2.1 (A:94-297)
UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
{Escherichia coli [TaxId: 562]}
Length = 204
Score = 28.9 bits (63), Expect = 1.1
Identities = 5/26 (19%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQ 59
++ + G ++GK+TV ++ +
Sbjct: 13 IVAITG--SNGKSTVTTLVGEMAKAA 36
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 28.5 bits (62), Expect = 1.1
Identities = 27/206 (13%), Positives = 61/206 (29%), Gaps = 43/206 (20%)
Query: 30 KQPFVIGVAGGTASGKTTVCNMIISRLRDQRV---VLVNQDSFYHSLTDEKLQNLHDYNF 86
+ + G + SGK+ V + + +L + L + + + E L + +
Sbjct: 4 HDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPW 63
Query: 87 DHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDP 146
+ + S+ + R NP+ F
Sbjct: 64 LQALNDAAFAMQRTNKV-------SLIVCSALKKHYRDLLREGNPNLSF----------- 105
Query: 147 RVRDLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKY 206
I++ D DV SR R + ++ Q+ +P +E
Sbjct: 106 ---------IYLKGDFDVIESRLKARK--GHFFKTQMLVTQFETLQEPGADE-------T 147
Query: 207 ADIIIPRGGDNDVAIDLIVQHILTKL 232
+++ D D ++ +V + +
Sbjct: 148 DVLVV----DIDQPLEGVVASTIEVI 169
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 194
Score = 28.8 bits (63), Expect = 1.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 32 PFVIGVAGGTASGKTTVCNMIISRL 56
P V+ V GG +GK T C I+ +
Sbjct: 1 PLVVFVLGGPGAGKGTQCARIVEKY 25
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 28.7 bits (63), Expect = 1.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 35 IGVAGGTASGKTTVCNMIISRLRDQRVVL 63
I + G +GKTT CN++ +L+ +L
Sbjct: 6 ILIEGLDRTGKTTQCNILYKKLQPNCKLL 34
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB
{Escherichia coli [TaxId: 562]}
Length = 433
Score = 29.1 bits (64), Expect = 1.3
Identities = 15/170 (8%), Positives = 40/170 (23%), Gaps = 7/170 (4%)
Query: 35 IGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAFDT 94
+ V G T +GK+ + + + +V D + L + +D
Sbjct: 53 LLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDP-----NGDMLSKFGRDKDIILNPYDQ 107
Query: 95 ELLLSDM--EKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDLM 152
E K + + + + E L +
Sbjct: 108 RTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMR 167
Query: 153 SMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILP 202
+ + + L ++ E + + + + +
Sbjct: 168 ELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPE 217
>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 198
Score = 28.7 bits (64), Expect = 1.3
Identities = 13/57 (22%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDS--FYHSLTDEKLQNLHDYNFDH 88
VIGV GG G V +M + + + N D+ + LQ
Sbjct: 6 VIGVGGG---GGNAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGL 59
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 28.3 bits (62), Expect = 1.5
Identities = 20/203 (9%), Positives = 52/203 (25%), Gaps = 28/203 (13%)
Query: 31 QPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPD 90
P + ++G ASGK T C +I ++ H + L+ ++
Sbjct: 2 DPLKVMISGAPASGKGTQCELIKTKY-----------QLAHISAGDLLRAEIAAGSENGK 50
Query: 91 AFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRD 150
+ + + + + + Q + +
Sbjct: 51 RAKEFM----EKGQLVPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIR 106
Query: 151 LMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADII 210
+ + D + + ++ L+ Y + ++ + +
Sbjct: 107 PDTFILLDVPDEL----LVERVVFDDTEEKVKLRLETYYQNIESLLSTY---ENIIVKV- 158
Query: 211 IPRGGDNDVAIDLIVQHILTKLG 233
D +D + I LG
Sbjct: 159 -----QGDATVDAVFAKIDELLG 176
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 28.5 bits (62), Expect = 1.5
Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 3/94 (3%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAFD 93
VI + G + +GK T+C + L + L++ + Y L L + D +
Sbjct: 5 VITIDGPSGAGKGTLCKAMAEAL---QWHLLDSGAIYRVLALAALHHHVDVASEDALVPL 61
Query: 94 TELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSR 127
L V + D R Q+
Sbjct: 62 ASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVA 95
>d1p3da3 c.72.2.1 (A:107-321) UDP-N-acetylmuramate-alanine ligase
MurC {Haemophilus influenzae [TaxId: 727]}
Length = 215
Score = 28.3 bits (62), Expect = 1.6
Identities = 10/31 (32%), Positives = 11/31 (35%), Gaps = 2/31 (6%)
Query: 29 TKQPFVIGVAGGTASGKTTVCNMIISRLRDQ 59
+ I VAG GKTT MI
Sbjct: 9 MRFRHGIAVAG--THGKTTTTAMISMIYTQA 37
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 28.1 bits (61), Expect = 1.6
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 35 IGVAGGTASGKTTVCNMIISRL 56
+ + GG +SGK+ + N + +
Sbjct: 10 VAILGGESSGKSVLVNKLAAVF 31
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 28.4 bits (63), Expect = 1.8
Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLR-DQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAF 92
V + G SGK+T+ N+I L+ D+ V + E F P
Sbjct: 32 VTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPL 91
Query: 93 D 93
Sbjct: 92 K 92
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 28.0 bits (61), Expect = 1.8
Identities = 31/212 (14%), Positives = 67/212 (31%), Gaps = 21/212 (9%)
Query: 35 IGVAGGTASGKTTVCNMIISRLRDQ--RVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAF 92
I + G +GKTT N+++ L R ++ ++ L ++ L D +
Sbjct: 5 IVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVGDEVI 64
Query: 93 D--TELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRD 150
E+L+ +++ + V P + + S G + +
Sbjct: 65 TDKAEVLMFYAARVQLVETVIKPALA---NGTWVIGDRHDLSTQAYQGGGRGIDQHMLAT 121
Query: 151 LMSMKI-------FVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPS 203
L + + D + + R E R ++ D + R + + E
Sbjct: 122 LRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNR-TRARYLELAAQD 180
Query: 204 KKYADIIIPRGGDNDVAIDLIVQHILTKLGQH 235
K I D ++ ++ I T +
Sbjct: 181 KSIHTI------DATQPLEAVMDAIRTTVTHW 206
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 28.3 bits (62), Expect = 2.0
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 1 METVIELADDFADDLSLQSASSESTTMPTKQPFVIGVAGGTASGKTTVCNMIISR 55
ME +I L + D S + +P I V GG ++GK++V + R
Sbjct: 1 MEDLIPLVNRLQDAFS-AIGQNADLDLPQ-----IAVVGGQSAGKSSVLENFVGR 49
>d1vl1a_ c.124.1.1 (A:) 6-phosphogluconolactonase {Thermotoga
maritima [TaxId: 2336]}
Length = 218
Score = 27.9 bits (61), Expect = 2.1
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Query: 2 ETVI-ELADDFADDLSLQSASSESTTMPTKQPFVIGVAGGTASGKTTVCNMIISRLRDQR 60
+TVI L D + D + + + + K + +AGG + + + R
Sbjct: 1 KTVIYLLEDGYVDFVVEKIRTKMEKLLEEKDKIFVVLAGGR-TPLPVYEKLAEQKFPWNR 59
Query: 61 VVLVNQDSFYHSLTDE 76
+ D Y L +
Sbjct: 60 IHFFLSDERYVPLDSD 75
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 27.7 bits (60), Expect = 2.2
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Query: 33 FVIGVAGGTASGKTTVCNMIISRLRDQRVV 62
F+ G G GKTT+ + L+ V
Sbjct: 5 FLTGPPG---VGKTTLIHKASEVLKSSGVP 31
>d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase
{Thermotoga maritima [TaxId: 2336]}
Length = 296
Score = 27.7 bits (60), Expect = 2.7
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 28 PTKQPFVIGVAGGTASGKTTVCNMIISRLRDQ 59
P + I + G +GK +V NM+ + L Q
Sbjct: 39 PHLEYKTIHIGG--TNGKGSVANMVSNILVSQ 68
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 27.7 bits (60), Expect = 2.7
Identities = 13/94 (13%), Positives = 26/94 (27%)
Query: 31 QPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPD 90
+ + + G + +GKTTV + L + D K + +
Sbjct: 18 RGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENV 77
Query: 91 AFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQ 124
E+ + I Y + +Q
Sbjct: 78 RRIAEVAKLFADAGLVCITSFISPYTQDRNNARQ 111
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus
stearothermophilus, PcrA [TaxId: 1422]}
Length = 318
Score = 27.7 bits (60), Expect = 3.1
Identities = 40/242 (16%), Positives = 68/242 (28%), Gaps = 29/242 (11%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQ-----------DSFYHSLTDEKLQNLH 82
++ AG SGKT V I+ L ++ V +
Sbjct: 29 IMAGAG---SGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGGAAE 85
Query: 83 DYNFDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDV-------- 134
D + +L D++++ + SI D + K + N
Sbjct: 86 DVWISTFHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTIL 145
Query: 135 -FILEGILVLHDPRVRDLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVK 193
I L P + + SDV QR D +D++ +
Sbjct: 146 GTISAAKNELLPPEQFAKRASTYYEKVVSDV-YQEYQQRLLRNHSLDFDDLIMTTIQLFD 204
Query: 194 PSFEEFILPSKKYADIIIPRGGDNDVAIDLIVQHILTKLGQHDLCKIYSNVDVIVSTFQI 253
+ K+ I I D + Q+ L K I + D S ++
Sbjct: 205 RVPDVLHYYQYKFQYIHIDEYQDTN-----RAQYTLVKKLAERFQNICAVGDADQSIYRW 259
Query: 254 RG 255
RG
Sbjct: 260 RG 261
>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 209
Score = 27.6 bits (61), Expect = 3.1
Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDS--FYHSLTDEKLQNLHDYNFDH 88
V+G G G T+ + + + + V +N D+ + D+K+
Sbjct: 20 VVGCGGA---GNNTITRLKMEGIEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGL 73
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 27.3 bits (59), Expect = 3.1
Identities = 13/120 (10%), Positives = 31/120 (25%)
Query: 35 IGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAFDT 94
I + G GKTT+ I+ RL + + ++ +
Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSK 62
Query: 95 ELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDLMSM 154
+ + +R + + V I++ I + + +
Sbjct: 63 FFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLV 122
>d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase
MurC {Thermotoga maritima [TaxId: 2336]}
Length = 207
Score = 27.4 bits (59), Expect = 3.4
Identities = 7/23 (30%), Positives = 10/23 (43%), Gaps = 2/23 (8%)
Query: 30 KQPFVIGVAGGTASGKTTVCNMI 52
++ V G GKTT M+
Sbjct: 12 EKKEEFAVTG--TDGKTTTTAMV 32
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 27.2 bits (59), Expect = 3.5
Identities = 18/182 (9%), Positives = 59/182 (32%), Gaps = 23/182 (12%)
Query: 35 IGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAFDT 94
I ++G + +GK+T+ + + D S + + ++ +++ +
Sbjct: 4 IVISGPSGTGKSTLLKKLFAEYPDSFGF-----SVSSTTRTPRAGEVNGKDYNFVSVDEF 58
Query: 95 ELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRVRDLMSM 154
+ ++ + E ++ + G + D ++ + S+
Sbjct: 59 KSMIKNNEF-----------IEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSV 107
Query: 155 KIFVDTDSDVRLSRRIQRD-----TVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADI 209
K + ++ + RG + E+ +++ R E + + +
Sbjct: 108 KAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINK--RLSAAQAELAYAETGAHDKV 165
Query: 210 II 211
I+
Sbjct: 166 IV 167
>d2bmoa2 d.129.3.3 (A:153-439) Nitrobenzene dioxygenase alpha
subunit, NBDO-alpha {Comamonas sp. JS765 [TaxId: 58226]}
Length = 287
Score = 27.5 bits (60), Expect = 3.6
Identities = 3/26 (11%), Positives = 10/26 (38%)
Query: 194 PSFEEFILPSKKYADIIIPRGGDNDV 219
P +++ + Y + G ++
Sbjct: 3 PPLIDYLGDAAWYLEPTFKYSGGLEL 28
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 27.2 bits (59), Expect = 3.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 30 KQPFVIGVAGGTASGKTTVCNMIISRL 56
K+ +I V GG SGK T C I+ +
Sbjct: 6 KKSKIIFVVGGPGSGKGTQCEKIVQKY 32
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 27.4 bits (59), Expect = 4.3
Identities = 30/210 (14%), Positives = 56/210 (26%), Gaps = 21/210 (10%)
Query: 28 PTKQPFVIGVAGGTASGKTTVCNMIISRLRDQRV-----------VLVNQDSFYHSLTDE 76
+ + G G GKTT+ + R+ + N + Y L+
Sbjct: 42 LSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNLYTILSLI 101
Query: 77 KLQNLHDYNFDHPDAFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFI 136
Q + A D L D +++ + I D + + D++
Sbjct: 102 VRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAA----EDLYT 157
Query: 137 LEGILVLHDPRVRDLMSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSF 196
L + R + V +D R + VE + L Y +
Sbjct: 158 LLRVHEEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTI 217
Query: 197 EEFILPSKKYADIIIPRGGDNDVAIDLIVQ 226
E + ++LI
Sbjct: 218 LEQRAELGLRDTVW------EPRHLELISD 241
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis
C virus (HCV), different isolates [TaxId: 11103]}
Length = 136
Score = 26.4 bits (57), Expect = 5.2
Identities = 15/102 (14%), Positives = 26/102 (25%), Gaps = 12/102 (11%)
Query: 37 VAGGTASGKTTVCNMIISRLRDQ------RVVLVNQDSFYHSLTDEKLQNLHDYNFDHPD 90
+ T SGK+T + + V F ++ + +
Sbjct: 13 LHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAATLG--FGAYMSKAHGVDPNIRTGVRTI 70
Query: 91 AFDTELLLSDMEKLKHGQAVSIPDYDF----KSHKRKQQSRL 128
+ + S K S YD + H S L
Sbjct: 71 TTGSPITYSTYGKFLADGGCSGGAYDIIICDECHSTDATSIL 112
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 26.8 bits (58), Expect = 5.2
Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNF 86
V + G +GKTT+ I++ ++ ++ + F D++L
Sbjct: 5 VTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENE-FGEVSVDDQLIGDRATQI 56
>d1r8ga_ d.128.1.3 (A:) Carboxylate-amine ligase YbdK {Escherichia
coli [TaxId: 562]}
Length = 368
Score = 27.1 bits (59), Expect = 5.2
Identities = 4/21 (19%), Positives = 11/21 (52%)
Query: 169 RIQRDTVERGRDIEDVLDQYA 189
++ RD V G + ++ ++
Sbjct: 344 QLMRDFVADGGSLIGLVKKHC 364
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 26.7 bits (58), Expect = 5.3
Identities = 22/185 (11%), Positives = 58/185 (31%), Gaps = 23/185 (12%)
Query: 31 QPFVIGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPD 90
Q + V+ + +GK+++ ++ S T + + + +H
Sbjct: 1 QGTLYIVSAPSGAGKSSLIQALLKTQPLYDT------QVSVSHTTRQPRPGEVHG-EHYF 53
Query: 91 AFDTELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFI---LEGILVLHDPR 147
+ + + + + + + + + + L DVF+ +G +
Sbjct: 54 FVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKM 113
Query: 148 VRDLMSMKI-FVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKY 206
+ + D RL RG+D E+V+ + + +Y
Sbjct: 114 PHARSIFILPPSKIELDRRLRG--------RGQDSEEVIAKRMAQ----AVAEMSHYAEY 161
Query: 207 ADIII 211
+I+
Sbjct: 162 DYLIV 166
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 26.8 bits (59), Expect = 5.3
Identities = 9/62 (14%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Query: 34 VIGVAGGTASGKTTVCNMIISRLR-DQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAF 92
++ + G +GKTT + I +R + ++ N + + + F
Sbjct: 34 IVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRRIF 93
Query: 93 DT 94
Sbjct: 94 PE 95
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 26.5 bits (57), Expect = 5.9
Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 4/81 (4%)
Query: 30 KQPFVIGVAGGTASGKTTVCNMIISRLR----DQRVVLVNQDSFYHSLTDEKLQNLHDYN 85
Q VI V GG +GK T C ++ +L + S E ++N
Sbjct: 6 DQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEG 65
Query: 86 FDHPDAFDTELLLSDMEKLKH 106
P LL + +
Sbjct: 66 QIVPQEITLALLRNAISDNVK 86
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 26.1 bits (56), Expect = 6.7
Identities = 24/199 (12%), Positives = 55/199 (27%), Gaps = 46/199 (23%)
Query: 35 IGVAGGTASGKTTVCNMIISRLRDQRVVLVNQDSFYHSLTDEKLQNLHDYNFDHPDAFDT 94
I + G GKTT+ + S+ +
Sbjct: 7 ILLTGTPGVGKTTLGKELASKS----------------------------GLKY------ 32
Query: 95 ELLLSDMEKLKHGQAVSIPDYDFKSHKRKQQSRLINPSDVFILEGILVLHDPRV---RDL 151
++ + + Q D ++ + + + G++V +
Sbjct: 33 ---INVGDLAREEQLYDGYDEEYDCPILDEDRVVDELDNQMREGGVIVDYHGCDFFPERW 89
Query: 152 MSMKIFVDTDSDVRLSRRIQRDTVERGRDIEDVLDQYARFVKPSFEEFILPSKKYADIII 211
+ + TD++V R R E+ + +EE K+ +
Sbjct: 90 FHIVFVLRTDTNVLYERLETRGYNEKKLTDNI----QCEIFQVLYEEATASYKEEIVHQL 145
Query: 212 PRGGDNDVA--IDLIVQHI 228
P ++ +D I++ I
Sbjct: 146 PSNKPEELENNVDQILKWI 164
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.139 0.402
Gapped
Lambda K H
0.267 0.0449 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,751,238
Number of extensions: 85521
Number of successful extensions: 380
Number of sequences better than 10.0: 1
Number of HSP's gapped: 355
Number of HSP's successfully gapped: 117
Length of query: 473
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 384
Effective length of database: 1,185,626
Effective search space: 455280384
Effective search space used: 455280384
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.7 bits)