Query 035516
Match_columns 167
No_of_seqs 114 out of 1055
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 05:21:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035516.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035516hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vkp_A BTB/POZ domain-containi 99.9 9.7E-28 3.3E-32 172.8 7.8 104 14-149 2-109 (109)
2 3b84_A Zinc finger and BTB dom 99.9 5.3E-28 1.8E-32 178.5 5.8 104 10-148 14-117 (119)
3 1r29_A B-cell lymphoma 6 prote 99.9 1.5E-27 5.2E-32 176.9 8.3 106 10-147 19-125 (127)
4 2if5_A Zinc finger and BTB dom 99.9 1.9E-27 6.6E-32 174.5 7.7 106 10-146 15-120 (120)
5 2z8h_A Transcription regulator 99.9 1.4E-27 4.9E-32 180.2 7.2 109 10-150 26-134 (138)
6 2yy9_A Zinc finger and BTB dom 99.9 8.6E-28 2.9E-32 181.4 4.5 107 9-150 14-120 (135)
7 1buo_A POZ domain, protein (pr 99.9 3.5E-27 1.2E-31 174.2 7.6 104 9-148 17-120 (121)
8 2vpk_A Myoneurin; transcriptio 99.9 2.5E-27 8.5E-32 173.3 6.7 105 10-147 12-116 (116)
9 3ohu_A Transcription regulator 99.9 1.1E-27 3.8E-32 177.2 3.7 103 10-145 22-125 (125)
10 2ihc_A Transcription regulator 99.9 1.8E-27 6.2E-32 176.8 4.2 106 9-146 18-123 (124)
11 3htm_A Speckle-type POZ protei 99.9 1.4E-26 4.9E-31 177.6 9.2 124 9-165 23-146 (172)
12 2ppi_A Gigaxonin; BTB domain, 99.9 5.5E-27 1.9E-31 179.2 6.1 108 10-146 37-144 (144)
13 2q81_A MIZ-1 protein; BTB/POZ 99.9 4.4E-27 1.5E-31 173.6 5.0 101 10-146 17-117 (119)
14 4eoz_A Speckle-type POZ protei 99.9 4.7E-27 1.6E-31 175.8 4.2 123 9-164 14-136 (145)
15 3hve_A Gigaxonin; ubiquitin, c 99.9 1.6E-26 5.5E-31 189.1 7.1 125 9-164 20-144 (256)
16 3ga1_A Nucleus accumbens-assoc 99.9 9.9E-27 3.4E-31 173.5 5.2 104 11-148 24-127 (129)
17 3m5b_A Zinc finger and BTB dom 99.9 9.5E-26 3.2E-30 168.1 6.8 97 12-148 22-118 (119)
18 3i3n_A Kelch-like protein 11; 99.9 8.3E-26 2.8E-30 187.3 6.7 125 9-164 21-152 (279)
19 3fkc_A Transcriptional regulat 99.9 5.6E-24 1.9E-28 157.0 5.4 91 10-130 21-112 (116)
20 3hqi_A Speckle-type POZ protei 99.9 8.4E-24 2.9E-28 177.1 7.1 121 11-164 165-285 (312)
21 2ast_A S-phase kinase-associat 99.7 5.3E-17 1.8E-21 126.6 5.6 96 23-150 3-127 (159)
22 4ajy_C Transcription elongatio 99.5 2.7E-14 9.3E-19 103.0 6.1 82 23-128 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.4 9.7E-14 3.3E-18 106.5 6.3 92 23-150 4-122 (141)
24 2p1m_A SKP1-like protein 1A; F 99.4 4.3E-14 1.5E-18 110.5 0.2 98 23-155 6-132 (160)
25 1hv2_A Elongin C, ELC1; protei 98.9 2.2E-09 7.5E-14 77.9 5.8 80 22-128 5-99 (99)
26 3v7d_A Suppressor of kinetocho 98.8 4.6E-09 1.6E-13 82.9 6.3 100 22-149 8-133 (169)
27 2fnj_C Transcription elongatio 98.8 5.1E-09 1.8E-13 75.5 5.6 82 23-128 3-96 (96)
28 3drz_A BTB/POZ domain-containi 98.3 1.5E-06 5.3E-11 63.4 7.2 98 22-147 7-106 (107)
29 1vcb_B Protein (elongin C); tu 98.3 4.8E-07 1.6E-11 67.1 3.4 83 22-128 18-112 (112)
30 3drx_A BTB/POZ domain-containi 97.5 0.00024 8.1E-09 57.9 6.7 97 23-147 14-112 (202)
31 3kvt_A Potassium channel prote 96.6 0.00045 1.6E-08 51.2 0.6 83 23-130 7-91 (115)
32 1t1d_A Protein (potassium chan 95.9 0.0056 1.9E-07 44.2 3.2 83 23-130 3-88 (100)
33 1s1g_A Potassium voltage-gated 95.4 0.0096 3.3E-07 44.5 3.1 84 22-130 14-98 (124)
34 1nn7_A Potassium channel KV4.2 94.9 0.0062 2.1E-07 44.1 0.7 83 23-130 2-85 (105)
35 2nz0_B Potassium voltage-gated 94.3 0.022 7.4E-07 43.5 2.6 89 17-130 31-120 (140)
36 2r9r_B Paddle chimera voltage 77.5 5 0.00017 35.9 6.8 85 22-130 53-139 (514)
37 2eqx_A Kelch repeat and BTB do 75.0 1.7 5.8E-05 30.5 2.4 35 108-148 5-39 (105)
38 1pd7_B MAD1; PAH2, SIN3, eukar 69.3 1 3.5E-05 25.2 0.1 15 114-128 3-17 (26)
39 3htm_A Speckle-type POZ protei 62.3 3.8 0.00013 29.9 2.1 46 95-149 119-164 (172)
40 3hqi_A Speckle-type POZ protei 49.5 7.8 0.00027 31.3 2.1 45 96-149 260-304 (312)
41 3hve_A Gigaxonin; ubiquitin, c 42.9 14 0.00046 29.0 2.5 45 96-149 119-163 (256)
42 3i3n_A Kelch-like protein 11; 39.5 15 0.00052 29.2 2.3 45 96-149 127-171 (279)
No 1
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.94 E-value=9.7e-28 Score=172.80 Aligned_cols=104 Identities=20% Similarity=0.290 Sum_probs=92.8
Q ss_pred hhhcCCCeeEEEEEcC----eEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCC
Q 035516 14 FCTTGLPSDIVIEVDE----MSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPED 89 (167)
Q Consensus 14 ~R~~g~lcDvtI~V~g----~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~ 89 (167)
+|+++.+|||+|.|+| +.|++||.||+++|+||++||.+++.++ . ..|.|+ +
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~----------------------~-~~i~l~-~ 57 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV----------------------K-SEIHIP-D 57 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC----------------------------C-CEEEET-T
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC----------------------C-CeEEeC-C
Confidence 6889999999999998 9999999999999999999999876531 3 679999 8
Q ss_pred CCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhh
Q 035516 90 FPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSV 149 (167)
Q Consensus 90 ~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v 149 (167)
++ +++|+.+++|+|||++.++.+|+.+++.+|++|+|+. |++.|++||.+++
T Consensus 58 ~~--~~~f~~~l~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~~l 109 (109)
T 2vkp_A 58 VE--PAAFLILLKYMYSDEIDLEADTVLATLYAAKKYIVPA------LAKACVNFLETSL 109 (109)
T ss_dssp SC--HHHHHHHHHHHHHCCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC
T ss_pred CC--HHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHhhC
Confidence 86 8999999999999999999999999999999999999 9999999998764
No 2
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.94 E-value=5.3e-28 Score=178.47 Aligned_cols=104 Identities=19% Similarity=0.234 Sum_probs=94.2
Q ss_pred chhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCC
Q 035516 10 GQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPED 89 (167)
Q Consensus 10 ~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~ 89 (167)
....+|+++.+|||+|.|+|++|+|||.||+++|+||++||.+++. ..|.|+ +
T Consensus 14 ~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~--------------------------~~i~l~-~ 66 (119)
T 3b84_A 14 ELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGSG--------------------------GSVVLP-A 66 (119)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTTC--------------------------CCEEEC-G
T ss_pred HHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCCC--------------------------CeEEeC-C
Confidence 4567899999999999999999999999999999999999987542 368899 8
Q ss_pred CCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHh
Q 035516 90 FPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQS 148 (167)
Q Consensus 90 ~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~ 148 (167)
++ +++|+.+++|+|||++.++.+|+.+++.+|++|+|+. |++.|++||.+.
T Consensus 67 ~~--~~~f~~ll~~iYtg~~~~~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~ 117 (119)
T 3b84_A 67 GF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAARELRVPE------AVELCQSFKPKT 117 (119)
T ss_dssp GG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHCC---
T ss_pred CC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHc
Confidence 86 8999999999999999999999999999999999999 999999999754
No 3
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.94 E-value=1.5e-27 Score=176.90 Aligned_cols=106 Identities=23% Similarity=0.439 Sum_probs=97.2
Q ss_pred chhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEe-CC
Q 035516 10 GQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISI-PE 88 (167)
Q Consensus 10 ~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L-~~ 88 (167)
....+|+++.+|||+|.|+|+.|+|||.||+++|+||++||.+.+.+ ....|.| +
T Consensus 19 ~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-----------------------~~~~i~l~~- 74 (127)
T 1r29_A 19 NLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-----------------------NLSVINLDP- 74 (127)
T ss_dssp HHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-----------------------TCSEEECCT-
T ss_pred HHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-----------------------CCCEEEeCC-
Confidence 44678899999999999999999999999999999999999987642 2457999 7
Q ss_pred CCCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHH
Q 035516 89 DFPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQ 147 (167)
Q Consensus 89 ~~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~ 147 (167)
+++ +++|+.+++|+|||++.++.+|+.+|+.+|++|+|+. |++.|++||.+
T Consensus 75 ~~~--~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~ 125 (127)
T 1r29_A 75 EIN--PEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEH------VVDTCRKFIKA 125 (127)
T ss_dssp TSC--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHT
T ss_pred CCC--HHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHh
Confidence 886 8999999999999999999999999999999999999 99999999975
No 4
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.94 E-value=1.9e-27 Score=174.52 Aligned_cols=106 Identities=24% Similarity=0.292 Sum_probs=94.5
Q ss_pred chhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCC
Q 035516 10 GQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPED 89 (167)
Q Consensus 10 ~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~ 89 (167)
....+|.++.+|||+|.|+|+.|+|||.||+++|+||++||.+++.++ ....|.|+ +
T Consensus 15 ~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~----------------------~~~~i~l~-~ 71 (120)
T 2if5_A 15 GLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVD----------------------QQNVYEID-F 71 (120)
T ss_dssp HHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC---------------------------CCSEEECC-S
T ss_pred HHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCcccc----------------------CCceEEeC-C
Confidence 455788999999999999999999999999999999999999876431 34679999 8
Q ss_pred CCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHH
Q 035516 90 FPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLS 146 (167)
Q Consensus 90 ~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~ 146 (167)
++ +++|+.+++|+|||++.++.+|+.+++.+|++|+|+. |++.|++||.
T Consensus 72 ~~--~~~f~~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 72 VS--AEALTALMDFAYTATLTVSTANVGDILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp SC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred CC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHHHhC
Confidence 86 8999999999999999999999999999999999999 9999999984
No 5
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.94 E-value=1.4e-27 Score=180.22 Aligned_cols=109 Identities=22% Similarity=0.320 Sum_probs=98.5
Q ss_pred chhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCC
Q 035516 10 GQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPED 89 (167)
Q Consensus 10 ~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~ 89 (167)
....+|.++.+|||+|.|+|+.|+|||.||+++|+|||+||.+.+.+ ...|.|+.+
T Consensus 26 ~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e------------------------~~~i~l~~~ 81 (138)
T 2z8h_A 26 SLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA------------------------ELTVTLPEE 81 (138)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT------------------------TEEEECCTT
T ss_pred HHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC------------------------CceEEeCCC
Confidence 45678899999999999999999999999999999999999987643 246888536
Q ss_pred CCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhhh
Q 035516 90 FPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSVF 150 (167)
Q Consensus 90 ~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v~ 150 (167)
++ +++|+.+++|+|||++.++.+|+..|+.+|++|+|+. |++.|++||.+.+.
T Consensus 82 v~--~~~~~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 82 VT--VKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHN------IEESCFQFLKFKFL 134 (138)
T ss_dssp SC--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGG------GHHHHHHHTTCCCS
T ss_pred CC--HHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHhcc
Confidence 76 8999999999999999999999999999999999999 99999999988764
No 6
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.94 E-value=8.6e-28 Score=181.40 Aligned_cols=107 Identities=19% Similarity=0.237 Sum_probs=93.6
Q ss_pred cchhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCC
Q 035516 9 KGQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPE 88 (167)
Q Consensus 9 ~~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~ 88 (167)
+....+|+++.+|||+|+|+|+.|+|||.||+++|+||++||.+.+. ..|.|+
T Consensus 14 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~--------------------------~~i~l~- 66 (135)
T 2yy9_A 14 QELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGTG--------------------------GSVVLP- 66 (135)
T ss_dssp HHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC------------------------------CCEEEC-
T ss_pred HHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCCC--------------------------CeEEeC-
Confidence 34567899999999999999999999999999999999999987541 368899
Q ss_pred CCCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhhh
Q 035516 89 DFPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSVF 150 (167)
Q Consensus 89 ~~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v~ 150 (167)
+++ +++|+.+++|+|||++.++.+|+.+|+.||++|+|+. |++.|++||.+.+.
T Consensus 67 ~~~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 67 AGF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAAKELRVPE------AVELCQSFQPQTSV 120 (135)
T ss_dssp GGG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHCCC----
T ss_pred CCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhcc
Confidence 886 8999999999999999999999999999999999999 99999999988764
No 7
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.94 E-value=3.5e-27 Score=174.22 Aligned_cols=104 Identities=22% Similarity=0.344 Sum_probs=95.9
Q ss_pred cchhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCC
Q 035516 9 KGQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPE 88 (167)
Q Consensus 9 ~~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~ 88 (167)
+....+|+++.+|||+|.|+|+.|+|||.||+++|+||++||.++ ...|.|+
T Consensus 17 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~---------------------------~~~i~l~- 68 (121)
T 1buo_A 17 CKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN---------------------------SQHYTLD- 68 (121)
T ss_dssp HHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC---------------------------CSEEEEC-
T ss_pred HHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC---------------------------CcEEEeC-
Confidence 345678999999999999999999999999999999999999763 1368899
Q ss_pred CCCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHh
Q 035516 89 DFPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQS 148 (167)
Q Consensus 89 ~~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~ 148 (167)
+++ +++|+.+++|+|||++.++.+|+.+++.+|++|+|+. |++.|++||.+.
T Consensus 69 ~~~--~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~~ 120 (121)
T 1buo_A 69 FLS--PKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEY------LEEQCLKMLETI 120 (121)
T ss_dssp SSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHH------HHHHHHHHHHHH
T ss_pred CCC--HHHHHHHHHhhcCCCcCCCHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHh
Confidence 887 8999999999999999999999999999999999999 999999999865
No 8
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.94 E-value=2.5e-27 Score=173.30 Aligned_cols=105 Identities=20% Similarity=0.308 Sum_probs=92.9
Q ss_pred chhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCC
Q 035516 10 GQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPED 89 (167)
Q Consensus 10 ~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~ 89 (167)
....+|.++.+|||+|.|+|+.|+|||.||+++|+||++||.++.. ....|.++ +
T Consensus 12 ~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~~------------------------~~i~l~~~-~ 66 (116)
T 2vpk_A 12 RLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTSE------------------------NNVFLDQS-Q 66 (116)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCC------------------------SCEECCTT-T
T ss_pred HHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCCCC------------------------CeEEeecC-C
Confidence 4567899999999999999999999999999999999999987621 12345555 6
Q ss_pred CCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHH
Q 035516 90 FPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQ 147 (167)
Q Consensus 90 ~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~ 147 (167)
++ +++|+.+++|+|||++.++.+|+.+++.+|++|+|+. |++.|++||.+
T Consensus 67 ~~--~~~f~~ll~~~Yt~~~~~~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 67 VK--ADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp CC--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred CC--HHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 65 8999999999999999999999999999999999999 99999999853
No 9
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.94 E-value=1.1e-27 Score=177.22 Aligned_cols=103 Identities=23% Similarity=0.345 Sum_probs=94.3
Q ss_pred chhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCC
Q 035516 10 GQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPED 89 (167)
Q Consensus 10 ~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~ 89 (167)
....+|+++.+|||+|.|+|+.|+|||.||+++|+|||+||.+...+ ...|.|+ +
T Consensus 22 ~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e------------------------~~~i~l~-~ 76 (125)
T 3ohu_A 22 GLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN------------------------DLVVSLP-E 76 (125)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS------------------------SCEEECC-T
T ss_pred HHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC------------------------CcEEEeC-C
Confidence 35678999999999999999999999999999999999999887542 3578998 7
Q ss_pred -CCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHH
Q 035516 90 -FPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFL 145 (167)
Q Consensus 90 -~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL 145 (167)
++ +++|+.+++|+|||++.++.+|+.+++.+|++|+|+. |++.|++||
T Consensus 77 ~~~--~~~f~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 77 EVT--ARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp TCC--HHHHHHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred CCC--HHHHHHHHHhHcCCceEECHHHHHHHHHHHHHhCCHH------HHHHHHHhC
Confidence 86 8999999999999999999999999999999999999 999998875
No 10
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.93 E-value=1.8e-27 Score=176.76 Aligned_cols=106 Identities=25% Similarity=0.326 Sum_probs=93.7
Q ss_pred cchhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCC
Q 035516 9 KGQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPE 88 (167)
Q Consensus 9 ~~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~ 88 (167)
+....+|.++.+|||+|.|+|+.|+|||.|||++|+||++||.+++.+ ...|.|+.
T Consensus 18 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e------------------------~~~i~l~~ 73 (124)
T 2ihc_A 18 LSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG------------------------ELNITLPE 73 (124)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---------------------------CEEEECCT
T ss_pred HHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC------------------------CceEeecC
Confidence 345678999999999999999999999999999999999999987642 24688843
Q ss_pred CCCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHH
Q 035516 89 DFPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLS 146 (167)
Q Consensus 89 ~~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~ 146 (167)
+++ +++|+.+++|+|||++.++.+|+.+|+.+|++|+|+. |++.|++||.
T Consensus 74 ~v~--~~~f~~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 74 EVT--VKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp TSC--HHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred CcC--HHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 675 8999999999999999999999999999999999999 9999999985
No 11
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.93 E-value=1.4e-26 Score=177.63 Aligned_cols=124 Identities=17% Similarity=0.182 Sum_probs=110.9
Q ss_pred cchhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCC
Q 035516 9 KGQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPE 88 (167)
Q Consensus 9 ~~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~ 88 (167)
+...++|.++.+|||+|.|+|+.|++||.||+++|+|||+||.+++.++ ....|.|+
T Consensus 23 ~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~----------------------~~~~i~l~- 79 (172)
T 3htm_A 23 DELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES----------------------KKNRVEIN- 79 (172)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGG----------------------GTTEEEEC-
T ss_pred HHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCcccc----------------------CCCeEEec-
Confidence 4566788899999999999999999999999999999999999876531 34689999
Q ss_pred CCCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhhhcChHHHHHHHHhhhh
Q 035516 89 DFPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSVFKSLKDSIRALKSCEN 165 (167)
Q Consensus 89 ~~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v~~~~~~~~~~l~~~~~ 165 (167)
+++ +++|+.+++|+|+|++.++.+|+..|+.+|++|+|+. |++.|++||.+.+ +.++++.+++.++.
T Consensus 80 ~~~--~~~f~~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l--~~~n~~~~~~~A~~ 146 (172)
T 3htm_A 80 DVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCEDALCSNL--SVENAAEILILADL 146 (172)
T ss_dssp SSC--HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC--CTTTHHHHHHHHHH
T ss_pred CCC--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhC--CHHHHHHHHHHHHH
Confidence 886 8999999999999999999999999999999999999 9999999999877 47788888876543
No 12
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.93 E-value=5.5e-27 Score=179.20 Aligned_cols=108 Identities=15% Similarity=0.197 Sum_probs=93.4
Q ss_pred chhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCC
Q 035516 10 GQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPED 89 (167)
Q Consensus 10 ~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~ 89 (167)
....+|+++.+|||+|.|+|+.|+|||.||+++|+|||+||.+.+.+. + .....|.|+ +
T Consensus 37 ~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~-----------------e---~~~~~I~l~-~ 95 (144)
T 2ppi_A 37 ALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKD-----------------D---GSTYKIELE-G 95 (144)
T ss_dssp HHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-------------------------CCCEEECC-S
T ss_pred HHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccc-----------------c---CCCcEEEeC-C
Confidence 446788999999999999999999999999999999999999765420 0 034679999 8
Q ss_pred CCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHH
Q 035516 90 FPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLS 146 (167)
Q Consensus 90 ~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~ 146 (167)
++ +++|+.+++|+|||++.++.+|+.+|+.+|++|+|+. |++.|++||.
T Consensus 96 v~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 96 IS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp SC--HHHHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred CC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 87 8999999999999999999999999999999999999 9999999974
No 13
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.93 E-value=4.4e-27 Score=173.56 Aligned_cols=101 Identities=24% Similarity=0.301 Sum_probs=92.3
Q ss_pred chhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCC
Q 035516 10 GQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPED 89 (167)
Q Consensus 10 ~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~ 89 (167)
....+|+++.+|||+|.|+|+.|+|||.||+++|+||++||++.. ..|.|+ +
T Consensus 17 ~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~---------------------------~~i~l~-~ 68 (119)
T 2q81_A 17 QLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQK---------------------------DVVHLD-I 68 (119)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC---------------------------SGGGGG-G
T ss_pred HHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCCC---------------------------CEEEeC-C
Confidence 456789999999999999999999999999999999999998631 246677 7
Q ss_pred CCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHH
Q 035516 90 FPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLS 146 (167)
Q Consensus 90 ~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~ 146 (167)
++ +++|+.+++|+|||++.++.+|+.+++.+|++|+|++ |++.|++||.
T Consensus 69 ~~--~~~f~~ll~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 69 SN--AAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp CC--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred CC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 75 8999999999999999999999999999999999999 9999999985
No 14
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.93 E-value=4.7e-27 Score=175.83 Aligned_cols=123 Identities=17% Similarity=0.191 Sum_probs=96.0
Q ss_pred cchhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCC
Q 035516 9 KGQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPE 88 (167)
Q Consensus 9 ~~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~ 88 (167)
+....+++++.+|||+|.|+|+.|++||.||+++|+||++||.+++.+ . ....|.|+
T Consensus 14 ~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e-------------------~---~~~~i~l~- 70 (145)
T 4eoz_A 14 DELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE-------------------S---KKNRVEIN- 70 (145)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHH-------------------H---HHTEEEEC-
T ss_pred HHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcC-------------------C---CCceEEec-
Confidence 456678889999999999999999999999999999999999987532 0 24689999
Q ss_pred CCCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhhhcChHHHHHHHHhhh
Q 035516 89 DFPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSVFKSLKDSIRALKSCE 164 (167)
Q Consensus 89 ~~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v~~~~~~~~~~l~~~~ 164 (167)
+++ +++|+.+++|+|+|++.++.+|+..++.+|++|+|+. |++.|++||.+.+ +.++|+.+++.++
T Consensus 71 ~~~--~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l--~~~n~~~~l~~A~ 136 (145)
T 4eoz_A 71 DVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCEDALCSNL--SVENAAEILILAD 136 (145)
T ss_dssp SSC--HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHCC--------------------
T ss_pred CCC--HHHHHHHHHhhccCccCCcHHHHHHHHHHHHHhCHHH------HHHHHHHHHHHhC--CHHHHHHHHHHHH
Confidence 886 8999999999999999999999999999999999999 9999999999887 4788888887654
No 15
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.93 E-value=1.6e-26 Score=189.10 Aligned_cols=125 Identities=14% Similarity=0.181 Sum_probs=102.2
Q ss_pred cchhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCC
Q 035516 9 KGQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPE 88 (167)
Q Consensus 9 ~~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~ 88 (167)
+....+|.++.+|||+|.|+|+.|+|||.||+++|+||++||++++.+. |. ....|.|+
T Consensus 20 ~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~-----------------e~---~~~~i~l~- 78 (256)
T 3hve_A 20 RALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKD-----------------DG---STYKIELE- 78 (256)
T ss_dssp HHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-------------------------------CEEECS-
T ss_pred HHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcc-----------------cC---CCCeEEeC-
Confidence 3456789999999999999999999999999999999999999876420 00 34689999
Q ss_pred CCCCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhhhcChHHHHHHHHhhh
Q 035516 89 DFPGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSVFKSLKDSIRALKSCE 164 (167)
Q Consensus 89 ~~~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v~~~~~~~~~~l~~~~ 164 (167)
+++ +++|+.+++|+|||++.++.+|+.+++.||++|+|+. |++.|++||.+.+ +.++|+.+++.++
T Consensus 79 ~v~--~~~f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l--~~~n~~~i~~~A~ 144 (256)
T 3hve_A 79 GIS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLCCEFLEGCI--AAENCIGIRDFAL 144 (256)
T ss_dssp SCC--HHHHHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHH------HHHHHHHHHHHTC--CSSTTHHHHHHHH
T ss_pred CCC--HHHHHHHHhhccCCCCcccHhHHHHHHHHHHHHChHH------HHHHHHHHHHhhC--CHhhHHHHHHHHH
Confidence 887 8999999999999999999999999999999999999 9999999999887 4678888877554
No 16
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.93 E-value=9.9e-27 Score=173.52 Aligned_cols=104 Identities=18% Similarity=0.391 Sum_probs=88.0
Q ss_pred hhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCC
Q 035516 11 QAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDF 90 (167)
Q Consensus 11 ~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~ 90 (167)
...+|+++.+|||+|.|+|+.|+|||.||+++|+|||+||.+. . ...|.||.++
T Consensus 24 l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~-~-------------------------~~~i~l~~~~ 77 (129)
T 3ga1_A 24 LNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS-R-------------------------SAVVELPAAV 77 (129)
T ss_dssp HHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC-C-------------------------CSEEECCTTC
T ss_pred HHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC-C-------------------------CCEEEECCCC
Confidence 4567889999999999999999999999999999999999875 1 2468885367
Q ss_pred CCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHh
Q 035516 91 PGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQS 148 (167)
Q Consensus 91 ~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~ 148 (167)
+ +++|+.+++|+|||++.++.+|+..++.+|++|+|+. |++.|++||.+.
T Consensus 78 ~--~~~f~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~------l~~~C~~~L~~~ 127 (129)
T 3ga1_A 78 Q--PQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQE------IMEKGTEFFLKV 127 (129)
T ss_dssp C--HHHHHHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTT------SSCC--------
T ss_pred C--HHHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHh
Confidence 6 8999999999999999999999999999999999999 999999999764
No 17
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.92 E-value=9.5e-26 Score=168.09 Aligned_cols=97 Identities=22% Similarity=0.225 Sum_probs=86.6
Q ss_pred hhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCC
Q 035516 12 AWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFP 91 (167)
Q Consensus 12 ~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~ 91 (167)
.-.|+++.+|||+|.|+|++|+|||.|||++|+|||+ . ...|.|+ +++
T Consensus 22 ~l~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~------~-------------------------~~~i~l~-~v~ 69 (119)
T 3m5b_A 22 LAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR------R-------------------------GQWALGE-GIS 69 (119)
T ss_dssp HHHHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC------C-------------------------EEEECCS-SCC
T ss_pred HHHHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc------C-------------------------CCEEEeC-CCC
Confidence 3358899999999999999999999999999999974 1 1368899 887
Q ss_pred CChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHh
Q 035516 92 GGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQS 148 (167)
Q Consensus 92 g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~ 148 (167)
+++|+.+++|+|||++.++.+|+.+++.||++|||+. |++.|++++.++
T Consensus 70 --~~~f~~ll~fiYtg~~~i~~~~v~~ll~aA~~l~i~~------l~~~C~~~~~~~ 118 (119)
T 3m5b_A 70 --PSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQS------LEEACWRARGDR 118 (119)
T ss_dssp --HHHHHHHHHHHTTCCEEECGGGHHHHHHHHHHTTCHH------HHHHHHHHC---
T ss_pred --HHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhhc
Confidence 8999999999999999999999999999999999999 999999998753
No 18
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.92 E-value=8.3e-26 Score=187.27 Aligned_cols=125 Identities=16% Similarity=0.219 Sum_probs=104.0
Q ss_pred cchhhhhhcCCCeeEEEEEc---CeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEE
Q 035516 9 KGQAWFCTTGLPSDIVIEVD---EMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHIS 85 (167)
Q Consensus 9 ~~~~~~R~~g~lcDvtI~V~---g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~ 85 (167)
+....+|++|.+|||+|+|+ |+.|+|||.||+++|+|||+||++++.++ ....|.
T Consensus 21 ~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~----------------------~~~~i~ 78 (279)
T 3i3n_A 21 WRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSES----------------------RSGRVE 78 (279)
T ss_dssp HHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC------------------------------EEE
T ss_pred HHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccc----------------------cCCeEE
Confidence 34567899999999999998 99999999999999999999999876531 245788
Q ss_pred eCCCC----CCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhhhcChHHHHHHHH
Q 035516 86 IPEDF----PGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSVFKSLKDSIRALK 161 (167)
Q Consensus 86 L~~~~----~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v~~~~~~~~~~l~ 161 (167)
|+ ++ ...+++|+.+++|+|||++.++.+|+..++.||++|+|+. |++.|++||.+.+ +.++|+.++.
T Consensus 79 l~-~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l--~~~n~~~i~~ 149 (279)
T 3i3n_A 79 MR-KWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKL--HLSNCVAIHS 149 (279)
T ss_dssp CC-CCSSTTCSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC--CTTTHHHHHH
T ss_pred ec-cccccCCCCHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcC--CcchHHHHHH
Confidence 86 33 2248999999999999999999999999999999999999 9999999999987 4788888877
Q ss_pred hhh
Q 035516 162 SCE 164 (167)
Q Consensus 162 ~~~ 164 (167)
.++
T Consensus 150 ~A~ 152 (279)
T 3i3n_A 150 LAH 152 (279)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 19
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.89 E-value=5.6e-24 Score=156.96 Aligned_cols=91 Identities=22% Similarity=0.282 Sum_probs=83.8
Q ss_pred chhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCC
Q 035516 10 GQAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPED 89 (167)
Q Consensus 10 ~~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~ 89 (167)
....+|+++.+|||+|.|+|+.|+|||.||+++|+||++||.++. ..|.|+ +
T Consensus 21 ~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~~---------------------------~~i~l~-~ 72 (116)
T 3fkc_A 21 SLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVAG---------------------------QVVELS-F 72 (116)
T ss_dssp HHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSCC---------------------------SEEEEC-S
T ss_pred HHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCCC---------------------------CEEEeC-C
Confidence 355788999999999999999999999999999999999998641 368899 8
Q ss_pred CCCChHHHHHHhHhhhCcee-eeccCchhhHHHcccccccCc
Q 035516 90 FPGGSETFEMVAKFCYGVKM-ELSSSNVAPLRCAGEYLEMTE 130 (167)
Q Consensus 90 ~~g~a~~f~~ll~F~Ytg~l-~is~~nv~~ll~AA~~L~m~~ 130 (167)
++ +++|+.+++|+|||++ .++.+|+.+++.+|++|+|+.
T Consensus 73 ~~--~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 73 IR--AEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp SC--HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHH
T ss_pred CC--HHHHHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccc
Confidence 87 8999999999999999 799999999999999999987
No 20
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.89 E-value=8.4e-24 Score=177.13 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=105.1
Q ss_pred hhhhhhcCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCC
Q 035516 11 QAWFCTTGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDF 90 (167)
Q Consensus 11 ~~~~R~~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~ 90 (167)
...++.++.+|||+|.|+|+.|+|||.|||++|+||++||.+.+.++ ...+|.|+ ++
T Consensus 165 l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~----------------------~~~~i~l~-~~ 221 (312)
T 3hqi_A 165 LGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES----------------------KKNRVEIN-DV 221 (312)
T ss_dssp HHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC---------------------------CCSEEEEC-SS
T ss_pred HHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCcccc----------------------CCceEEec-CC
Confidence 45677899999999999999999999999999999999999876531 34689999 88
Q ss_pred CCChHHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhhhcChHHHHHHHHhhh
Q 035516 91 PGGSETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSVFKSLKDSIRALKSCE 164 (167)
Q Consensus 91 ~g~a~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v~~~~~~~~~~l~~~~ 164 (167)
+ +++|+.+|+|+||+++.++..|+..|+.||++|+|+. |++.|++||.+.+ +.++++.+|+.++
T Consensus 222 ~--~~~f~~~L~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~~--~~~n~~~~l~~A~ 285 (312)
T 3hqi_A 222 E--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCEDALCSNL--SVENAAEILILAD 285 (312)
T ss_dssp C--HHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHTTCHH------HHHHHHHHHHTTC--CTTTHHHHHHHHH
T ss_pred C--HHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCHHH------HHHHHHHHHHccC--CHHHHHHHHHHHH
Confidence 7 8999999999999999999999999999999999999 9999999999876 4677777777554
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.66 E-value=5.3e-17 Score=126.56 Aligned_cols=96 Identities=15% Similarity=0.293 Sum_probs=82.8
Q ss_pred EEEEE-cCeEEeecccccccCCHHHHHHhhC-CCC-CCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHH
Q 035516 23 IVIEV-DEMSFHLHKFPLMSKSRKLHQLITE-QEN-KPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEM 99 (167)
Q Consensus 23 vtI~V-~g~~F~~HK~VLaa~S~YFr~lf~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~ 99 (167)
|+|+. +|+.|.+||.+ |++|+|||.||.. +.. + . ....|.|| +++ +.+++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e-------------------~---~~~~Ipl~-~V~--~~iL~k 56 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDE-------------------G---DDDPVPLP-NVN--AAILKK 56 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS----------------------------CEECT-TSC--HHHHHH
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCccc-------------------c---cCCCcCCC-Ccc--HHHHHH
Confidence 67775 79999999998 9999999999987 332 1 0 23579999 997 899999
Q ss_pred HhHhhhCce--------------------------eeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhhh
Q 035516 100 VAKFCYGVK--------------------------MELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSVF 150 (167)
Q Consensus 100 ll~F~Ytg~--------------------------l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v~ 150 (167)
|++|||+++ +.++..|+.+|+.||+||+|.. |++.|++|+..++.
T Consensus 57 Viey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~~i~ 127 (159)
T 2ast_A 57 VIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 127 (159)
T ss_dssp HHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHS
T ss_pred HHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 999999987 7889999999999999999999 99999999998874
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.49 E-value=2.7e-14 Score=103.01 Aligned_cols=82 Identities=13% Similarity=0.247 Sum_probs=65.8
Q ss_pred EEEEE-cCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHHh
Q 035516 23 IVIEV-DEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMVA 101 (167)
Q Consensus 23 vtI~V-~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~ll 101 (167)
|+|+. +|++|++||.+ |.+|+|||.||...... .|. ....|.|| +++ +.+++.|+
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~-----------------~E~---~~~~I~l~-~V~--~~iL~kVi 59 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQF-----------------AEN---ETNEVNFR-EIP--SHVLSKVC 59 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC----------------------------CEEECT-TSC--HHHHHHHH
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCc-----------------ccc---CCCceECC-CCC--HHHHHHHH
Confidence 55654 79999999999 99999999999863211 000 24579999 997 89999999
Q ss_pred Hhhh-----C---ceee---eccCchhhHHHccccccc
Q 035516 102 KFCY-----G---VKME---LSSSNVAPLRCAGEYLEM 128 (167)
Q Consensus 102 ~F~Y-----t---g~l~---is~~nv~~ll~AA~~L~m 128 (167)
+||| + +.+. |+.+|+.+|+.||+||+.
T Consensus 60 ey~~~h~~~~~~~~~i~~~~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 60 MYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 97 (97)
T ss_dssp HHHHHHHHHTTCCSCCCCCCCCGGGHHHHHHHHHHHTC
T ss_pred HHHHHhcccCCCcCCCCcCcCCHHHHHHHHHHHhhhCC
Confidence 9999 5 6787 999999999999999974
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.44 E-value=9.7e-14 Score=106.47 Aligned_cols=92 Identities=15% Similarity=0.295 Sum_probs=81.1
Q ss_pred EEEEE-cCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHHh
Q 035516 23 IVIEV-DEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMVA 101 (167)
Q Consensus 23 vtI~V-~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~ll 101 (167)
|+|+. +|+.|.+||.+ |.+|+|||.|+.... . ..|.|| +++ +.+++.|+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-~-------------------------~~Ipl~-~V~--~~iL~kVi 53 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG-M-------------------------DPVPLP-NVN--AAILKKVI 53 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC-C-------------------------SSEECT-TCC--HHHHHHHH
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC-C-------------------------CceecC-CcC--HHHHHHHH
Confidence 67776 79999999998 899999999997531 1 258999 997 89999999
Q ss_pred HhhhCce--------------------------eeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhhh
Q 035516 102 KFCYGVK--------------------------MELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSVF 150 (167)
Q Consensus 102 ~F~Ytg~--------------------------l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v~ 150 (167)
+|||..+ +.++..++.+|+.||+||+|.. |++.|++|+...+.
T Consensus 54 eyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 54 QWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 122 (141)
T ss_dssp HHHHHHTTCC-----------------HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHT
T ss_pred HHHHHhccCCCccccccccccchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHc
Confidence 9999876 6788899999999999999999 99999999998874
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.38 E-value=4.3e-14 Score=110.48 Aligned_cols=98 Identities=18% Similarity=0.352 Sum_probs=54.0
Q ss_pred EEEEE-cCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHHh
Q 035516 23 IVIEV-DEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMVA 101 (167)
Q Consensus 23 vtI~V-~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~ll 101 (167)
|+|+. +|+.|.+||.+ |.+|+|||.||..... ...|.|| +++ +.+++.|+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~-------------------------~~~Ipl~-~V~--~~iL~kVi 56 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV-------------------------DNGVPLP-NVT--SKILAKVI 56 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC-------------------------------------CCT-TSC--HHHHHHHH
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC-------------------------CCceeCC-cCc--HHHHHHHH
Confidence 66764 79999999998 8999999999975421 2368899 997 89999999
Q ss_pred HhhhCce---------------------------eeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhhh-cCh
Q 035516 102 KFCYGVK---------------------------MELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSVF-KSL 153 (167)
Q Consensus 102 ~F~Ytg~---------------------------l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v~-~~~ 153 (167)
+|||..+ +.++..++.+|+.||+||+|.. |++.|++|+...+. .+.
T Consensus 57 eyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ikgkt~ 130 (160)
T 2p1m_A 57 EYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVADMIKGKTP 130 (160)
T ss_dssp HC------------------------------------------CHHHHHHTTCHH------HHHHHHHHHHHTTTTCCH
T ss_pred HHHHHcccCCCcccccccccccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHcCCCH
Confidence 9999976 5788899999999999999999 99999999988773 344
Q ss_pred HH
Q 035516 154 KD 155 (167)
Q Consensus 154 ~~ 155 (167)
++
T Consensus 131 ee 132 (160)
T 2p1m_A 131 EE 132 (160)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.89 E-value=2.2e-09 Score=77.92 Aligned_cols=80 Identities=16% Similarity=0.245 Sum_probs=65.1
Q ss_pred eEEEEE-cCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHH
Q 035516 22 DIVIEV-DEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMV 100 (167)
Q Consensus 22 DvtI~V-~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~l 100 (167)
-|+|+. +|+.|.+|+.+ |..|.++|.|+..+... ....|.|| +++ +.+++.|
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~-----------------------~~~~Iplp-~V~--~~iL~kV 57 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRE-----------------------SKGRIELK-QFD--SHILEKA 57 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTT-----------------------CTTEEEET-TSC--HHHHHHH
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccccc-----------------------CCCceecC-CcC--HHHHHHH
Confidence 367776 89999999996 89999999999874311 22479999 997 8999999
Q ss_pred hHhhhCce--------------eeeccCchhhHHHccccccc
Q 035516 101 AKFCYGVK--------------MELSSSNVAPLRCAGEYLEM 128 (167)
Q Consensus 101 l~F~Ytg~--------------l~is~~nv~~ll~AA~~L~m 128 (167)
++|||.-+ -.+....+.+|+.||+||+|
T Consensus 58 ieyc~~h~~~~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 58 VEYLNYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp HHHHHHHHHHHHHCSSCSSCCCCCCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhcccCCCccccccCCCccCCHHHHHHHHHHHHHhCc
Confidence 99999853 24566778899999999986
No 26
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.83 E-value=4.6e-09 Score=82.87 Aligned_cols=100 Identities=12% Similarity=0.292 Sum_probs=76.2
Q ss_pred eEEEEE-cCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHH
Q 035516 22 DIVIEV-DEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMV 100 (167)
Q Consensus 22 DvtI~V-~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~l 100 (167)
-|+|+. +|+.|.+++.+ |..|.+++.|+.....+. .+ . .....|.|| +++ +.+++.|
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~---------------~~-~--~~~~~Iplp-nV~--s~iL~kV 65 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDD---------------DE-D--DDEIVMPVP-NVR--SSVLQKV 65 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------------------------CEEECT-TCC--HHHHHHH
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCccc---------------cc-c--cCCCceeeC-CCC--HHHHHHH
Confidence 466765 69999999997 888999999998532210 00 0 023579999 897 8999999
Q ss_pred hHhhhCce-------------------------eeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhh
Q 035516 101 AKFCYGVK-------------------------MELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSV 149 (167)
Q Consensus 101 l~F~Ytg~-------------------------l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v 149 (167)
++|||--+ +.+....+.+|+.||+||+|.. |++.|++++...+
T Consensus 66 ieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 66 IEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAEMI 133 (169)
T ss_dssp HHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred HHHHHHcccCCCcccccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 99998743 2355566788999999999999 9999999998766
No 27
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.81 E-value=5.1e-09 Score=75.49 Aligned_cols=82 Identities=13% Similarity=0.213 Sum_probs=64.0
Q ss_pred EEEEE-cCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHHh
Q 035516 23 IVIEV-DEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMVA 101 (167)
Q Consensus 23 vtI~V-~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~ll 101 (167)
|+|+. +|+.|.+||.+ |..|.++|.|+...... +|. ....|.|| +++ +.+++.|+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~-----------------~e~---~~~~Ipl~-~V~--~~iL~kVi 58 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQF-----------------AEN---ETNEVNFR-EIP--SHVLSKVC 58 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC----------------------------CEEECS-SCC--HHHHHHHH
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCc-----------------ccc---cCCceeCC-CCC--HHHHHHHH
Confidence 56766 89999999996 89999999999863210 000 23579999 997 89999999
Q ss_pred HhhhCce-----------eeeccCchhhHHHccccccc
Q 035516 102 KFCYGVK-----------MELSSSNVAPLRCAGEYLEM 128 (167)
Q Consensus 102 ~F~Ytg~-----------l~is~~nv~~ll~AA~~L~m 128 (167)
+|||.-. -.+....+.+|+.||+||+|
T Consensus 59 eyc~~h~~~~~~~~~i~~w~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 59 MYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 96 (96)
T ss_dssp HHHHHHHHHHSCCSCCCCCCCCTTTHHHHHHHHHHHTC
T ss_pred HHHHHccccCCCcccCCCcccCHHHHHHHHHHHHHhCc
Confidence 9999743 25778889999999999986
No 28
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.32 E-value=1.5e-06 Score=63.35 Aligned_cols=98 Identities=14% Similarity=0.131 Sum_probs=72.8
Q ss_pred eEEEEEcCeEEeecccccccCC-HHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHH
Q 035516 22 DIVIEVDEMSFHLHKFPLMSKS-RKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMV 100 (167)
Q Consensus 22 DvtI~V~g~~F~~HK~VLaa~S-~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~l 100 (167)
=|+|.|+|+.|...+..|.... .+|.+||.....-. .. .| ....+-|+ - .+..|+.|
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~-------------~~---~d--~~~~~fiD--R--dp~~F~~I 64 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLD-------------SD---KD--ETGAYLID--R--DPTYFGPV 64 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGG-------------GG---BC--TTSCEEEC--S--CHHHHHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCC-------------cC---CC--CCceEEec--C--ChHHHHHH
Confidence 3688999999999999999886 57889987542110 00 00 12345553 3 38999999
Q ss_pred hHhhhCceeeecc-CchhhHHHcccccccCchhhhhhHHHHHHHHHHH
Q 035516 101 AKFCYGVKMELSS-SNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQ 147 (167)
Q Consensus 101 l~F~Ytg~l~is~-~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~ 147 (167)
++|..+|++.+.. .....++..|+|+++.+ |++.|++-+.+
T Consensus 65 L~~lr~g~l~~p~~~~~~~l~~Ea~fy~l~~------L~~~l~~~i~~ 106 (107)
T 3drz_A 65 LNYLRHGKLVINKDLAEEGVLEEAEFYNITS------LIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHSCCCCCTTSCHHHHHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred HHHhCCCeeCCCCCCCHHHHHHHHHHCCCHH------HHHHHHHHHhc
Confidence 9999999988754 23467999999999999 99999876643
No 29
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.26 E-value=4.8e-07 Score=67.09 Aligned_cols=83 Identities=13% Similarity=0.196 Sum_probs=62.7
Q ss_pred eEEEE-EcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHH
Q 035516 22 DIVIE-VDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMV 100 (167)
Q Consensus 22 DvtI~-V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~l 100 (167)
-|+|+ .+|+.|.+++. .|..|..++.|+...... +|. ....|.|| +++ +.+++.|
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~-----------------~e~---~~~~Iplp-nV~--s~iL~kV 73 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQF-----------------AEN---ETNEVNFR-EIP--SHVLSKV 73 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC----------------------------CEEECS-SCC--HHHHHHH
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCc-----------------ccc---cCCceeCC-CCC--HHHHHHH
Confidence 36676 57999999999 578999999999753210 000 23479999 997 8999999
Q ss_pred hHhhhCce-----------eeeccCchhhHHHccccccc
Q 035516 101 AKFCYGVK-----------MELSSSNVAPLRCAGEYLEM 128 (167)
Q Consensus 101 l~F~Ytg~-----------l~is~~nv~~ll~AA~~L~m 128 (167)
++|||--+ -.+....+.+|+.||+||+|
T Consensus 74 ieyc~~h~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 74 CMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 (112)
T ss_dssp HHHHHHHHHHSSCSSCCCCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhhhccCCcCCCCCcccCHHHHHHHHHHHHHhCc
Confidence 99998743 24667788999999999986
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.46 E-value=0.00024 Score=57.92 Aligned_cols=97 Identities=14% Similarity=0.150 Sum_probs=71.9
Q ss_pred EEEEEcCeEEeecccccccCC-HHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHHh
Q 035516 23 IVIEVDEMSFHLHKFPLMSKS-RKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMVA 101 (167)
Q Consensus 23 vtI~V~g~~F~~HK~VLaa~S-~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~ll 101 (167)
|+|.|+|+.|..-+..|.... .+|.+||.+...-. .. .| ....+-|+ - .+..|+.||
T Consensus 14 V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~-------------~~---~D--e~geyFID--R--DP~~F~~IL 71 (202)
T 3drx_A 14 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLD-------------SD---KD--ETGAYLID--R--DPTYFGPVL 71 (202)
T ss_dssp EEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC--------------------BC--TTCCEEEC--S--CSTTHHHHH
T ss_pred EEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccC-------------cc---cC--CCccEEec--C--ChHHHHHHH
Confidence 578899999999999999875 47888987542210 00 00 12345554 2 268999999
Q ss_pred HhhhCceeeecc-CchhhHHHcccccccCchhhhhhHHHHHHHHHHH
Q 035516 102 KFCYGVKMELSS-SNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQ 147 (167)
Q Consensus 102 ~F~Ytg~l~is~-~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~ 147 (167)
+|.-+|++.+.. .....++.-|+|++|.+ |++.|++-|..
T Consensus 72 nyLRtG~L~lP~~~~~~~l~eEA~FygL~~------Lv~~l~~~i~e 112 (202)
T 3drx_A 72 NYLRHGKLVINKDLAEEGVLEEAEFYNITS------LIKLVKDKIRE 112 (202)
T ss_dssp HHHHHSCCCCCTTSCHHHHHHHHHHTTCHH------HHHHHHHHHHH
T ss_pred HHhcCCccCCCCCCCHHHHHHHHHHCCcHH------HHHHHHHHHHH
Confidence 999999998754 23467999999999999 99999998854
No 31
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.57 E-value=0.00045 Score=51.18 Aligned_cols=83 Identities=12% Similarity=0.117 Sum_probs=59.6
Q ss_pred EEEEEcCeEEeecccccccCCH-HHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHHh
Q 035516 23 IVIEVDEMSFHLHKFPLMSKSR-KLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMVA 101 (167)
Q Consensus 23 vtI~V~g~~F~~HK~VLaa~S~-YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~ll 101 (167)
|+|.|+|+.|..-+..|..... .|-+||...... .+ ....+-|+ - .+..|..||
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~-------------------~~--~~g~~FiD--R--dp~~F~~IL 61 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNY-------------------DP--VLNEYFFD--R--HPGVFAQII 61 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTE-------------------ET--TTTEEEEC--S--CTTTHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCC-------------------CC--CCCcEEEe--c--ChHHHHHHH
Confidence 7889999999999999987643 344455432110 00 12345554 2 268999999
Q ss_pred HhhhCceeeecc-CchhhHHHcccccccCc
Q 035516 102 KFCYGVKMELSS-SNVAPLRCAGEYLEMTE 130 (167)
Q Consensus 102 ~F~Ytg~l~is~-~nv~~ll~AA~~L~m~~ 130 (167)
+|.-+|++.+.. ..+..++.-|+|++|.+
T Consensus 62 nylR~G~l~~p~~~~~~~~~~Ea~fy~i~~ 91 (115)
T 3kvt_A 62 NYYRSGKLHYPTDVCGPLFEEELEFWGLDS 91 (115)
T ss_dssp HHHHHSCBCCCSSSCHHHHHHHHHHHTCCG
T ss_pred HHhcCCCCCCCCcccHHHHHHHHHHhCCCh
Confidence 999999998765 35678999999999998
No 32
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=95.86 E-value=0.0056 Score=44.22 Aligned_cols=83 Identities=12% Similarity=0.105 Sum_probs=55.6
Q ss_pred EEEEEcCeEEeecccccccCCH-HHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHHh
Q 035516 23 IVIEVDEMSFHLHKFPLMSKSR-KLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMVA 101 (167)
Q Consensus 23 vtI~V~g~~F~~HK~VLaa~S~-YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~ll 101 (167)
|+|.|+|+.|...+..|...-. .+-+|+...... + + ....+-|+ - .+..|+.||
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~-----------------~--~--~~~eyFiD--R--dp~~F~~IL 57 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYY-----------------D--P--LRNEYFFD--R--NRPSFDAIL 57 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGE-----------------E--T--TTTEEEEC--S--CSTTHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhcccccc-----------------C--C--CceeEEEc--C--ChHHHHHHH
Confidence 6889999999999999865421 122223211000 0 0 12345554 2 268999999
Q ss_pred HhhhC-ceeeecc-CchhhHHHcccccccCc
Q 035516 102 KFCYG-VKMELSS-SNVAPLRCAGEYLEMTE 130 (167)
Q Consensus 102 ~F~Yt-g~l~is~-~nv~~ll~AA~~L~m~~ 130 (167)
+|.-+ |++.+.. ..+..++.-|+|++|.+
T Consensus 58 nflR~~G~l~~p~~~~~~~~~~Ea~fy~i~~ 88 (100)
T 1t1d_A 58 YFYQSGGRLRRPVNVPLDVFSEEIKFYELGE 88 (100)
T ss_dssp HHHHTTSCCCCCTTSCHHHHHHHHHHTTCCH
T ss_pred HHHhcCCcccCCCCCCHHHHHHHHHHcCCCH
Confidence 99998 8987643 34677999999999998
No 33
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.39 E-value=0.0096 Score=44.53 Aligned_cols=84 Identities=17% Similarity=0.110 Sum_probs=57.6
Q ss_pred eEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHHh
Q 035516 22 DIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMVA 101 (167)
Q Consensus 22 DvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~ll 101 (167)
=|+|.|+|+.|..-+..|..... .|+.. ... + ... .+ ....+-|+ - .+..|+.||
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~-~~~----~---------~~~--~~--~~g~~FiD--R--dp~~F~~IL 68 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGS-TEK----E---------FFF--NE--DTKEYFFD--R--DPEVFRCVL 68 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTS-SGG----G---------GTB--CS--SSCSEEEC--S--CHHHHHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceecc-cCC----c---------ccc--cC--CCCcEEEc--C--ChHHHHHHH
Confidence 47889999999999999976433 23332 100 0 000 00 12345554 2 389999999
Q ss_pred HhhhCceeeecc-CchhhHHHcccccccCc
Q 035516 102 KFCYGVKMELSS-SNVAPLRCAGEYLEMTE 130 (167)
Q Consensus 102 ~F~Ytg~l~is~-~nv~~ll~AA~~L~m~~ 130 (167)
+|.-+|++.+.. ..+..++.-|+|++|.+
T Consensus 69 nflR~G~l~~p~~~~~~~l~~Ea~fy~i~~ 98 (124)
T 1s1g_A 69 NFYRTGKLHYPRYECISAYDDELAFYGILP 98 (124)
T ss_dssp HHHHHSCBCCCTTSCHHHHHHHHHHTTCCG
T ss_pred HHHhcCCCCCCCCcCHHHHHHHHHHcCCCh
Confidence 999999988754 34688999999999998
No 34
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=94.89 E-value=0.0062 Score=44.15 Aligned_cols=83 Identities=12% Similarity=0.134 Sum_probs=57.2
Q ss_pred EEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHHhH
Q 035516 23 IVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMVAK 102 (167)
Q Consensus 23 vtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~ll~ 102 (167)
|+|.|+|+.|...+..|..... .|+.. ... . ... .+ ....+-|+ - .+..|+.||+
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~-~~~------~-------~~~--~~--~~~~~FiD--R--dp~~F~~ILn 56 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGS-SER------D-------FFY--HP--ETQQYFFD--R--DPDIFRHILN 56 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTS-GGG------G-------GGE--EG--GGTEEEEC--S--CTTTHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccc-cCC------c-------ccc--cC--CCCcEEEe--C--CcHHHHHHHH
Confidence 7899999999999999876432 23332 110 0 000 00 12345564 2 2689999999
Q ss_pred hhhCceeeecc-CchhhHHHcccccccCc
Q 035516 103 FCYGVKMELSS-SNVAPLRCAGEYLEMTE 130 (167)
Q Consensus 103 F~Ytg~l~is~-~nv~~ll~AA~~L~m~~ 130 (167)
|.-+|++.+.. ..+..++.-|+|++|.+
T Consensus 57 flR~g~l~~p~~~~~~~l~~Ea~fy~i~~ 85 (105)
T 1nn7_A 57 FYRTGKLHYPRHECISAYDEELAFFGLIP 85 (105)
T ss_dssp HHHHSCBCCCTTSCHHHHHHHHHHHTCCS
T ss_pred HHhcCCCCCCCCcCHHHHHHHHHHcCCCH
Confidence 99999987754 34688999999999998
No 35
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=94.34 E-value=0.022 Score=43.50 Aligned_cols=89 Identities=16% Similarity=0.110 Sum_probs=60.1
Q ss_pred cCCCeeEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHH
Q 035516 17 TGLPSDIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSET 96 (167)
Q Consensus 17 ~g~lcDvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~ 96 (167)
....-=|+|.|+|+.|...+..|...-. .|+.. ... . . .-.+ ....+-|+ - .+..
T Consensus 31 ~~~~~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~-~~~------~-------~--~~~~--~~g~yFiD--R--dp~~ 85 (140)
T 2nz0_B 31 KRQDELIVLNVSGRRFQTWRTTLERYPD---TLLGS-TEK------E-------F--FFNE--DTKEYFFD--R--DPEV 85 (140)
T ss_dssp TTCCCEEEEEETTEEEEEEHHHHHTCTT---STTTS-GGG------G-------G--SEET--TTTEEEEC--S--CHHH
T ss_pred CCCCCEEEEEECCEEEEeeHHHHhcCCC---eeecc-cCC------c-------c--cccC--CCCeEEEe--C--CcHH
Confidence 3344457889999999999999976432 23332 110 0 0 0000 12345564 2 3899
Q ss_pred HHHHhHhhhCceeeecc-CchhhHHHcccccccCc
Q 035516 97 FEMVAKFCYGVKMELSS-SNVAPLRCAGEYLEMTE 130 (167)
Q Consensus 97 f~~ll~F~Ytg~l~is~-~nv~~ll~AA~~L~m~~ 130 (167)
|+.||+|.-+|++.+.. ..+..++.-|+|++|.+
T Consensus 86 F~~ILnflR~G~l~~p~~~~~~~l~eEa~fy~i~~ 120 (140)
T 2nz0_B 86 FRCVLNFYRTGKLHYPRYECISAYDDELAFYGILP 120 (140)
T ss_dssp HHHHHHHHHHSSBCCCTTSCHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHhcCCcCCCCCcCHHHHHHHHHHcCCCh
Confidence 99999999999988754 34788999999999998
No 36
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=77.53 E-value=5 Score=35.85 Aligned_cols=85 Identities=9% Similarity=0.133 Sum_probs=54.5
Q ss_pred eEEEEEcCeEEeecccccccCCHHHHHHhhCCCCCCchhhhhhhhhhhhhhhhhhcccccceEEeCCCCCCChHHHHHHh
Q 035516 22 DIVIEVDEMSFHLHKFPLMSKSRKLHQLITEQENKPTMAWKQEKETEIEEEEGEEEEEATCHISIPEDFPGGSETFEMVA 101 (167)
Q Consensus 22 DvtI~V~g~~F~~HK~VLaa~S~YFr~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~L~~~~~g~a~~f~~ll 101 (167)
=|+|.|+|+.|...+..|...-. .++...... ....+ + ...+.-++ - .+..|+.||
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~---s~l~~~~~~-------------~~~~~--~--~~~~~f~D--R--~~~~F~~IL 108 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPE---TLLGDPKKR-------------MRYFD--P--LRNEYFFD--R--NRPSFDAIL 108 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---STTTCHHHH-------------GGGEE--T--TTTEEEEC--S--CHHHHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCC---CcccccccC-------------CcccC--C--CCCCEEEc--C--ChHHHHHHH
Confidence 46788999999999998864322 122210000 00000 0 12344454 2 389999999
Q ss_pred HhhhC-ceeeecc-CchhhHHHcccccccCc
Q 035516 102 KFCYG-VKMELSS-SNVAPLRCAGEYLEMTE 130 (167)
Q Consensus 102 ~F~Yt-g~l~is~-~nv~~ll~AA~~L~m~~ 130 (167)
+|..+ |++.+.. -.+..+..-|+|+++.+
T Consensus 109 ~~~r~~g~l~~p~~~~~~~~~~E~~f~~i~~ 139 (514)
T 2r9r_B 109 YYYQSGGRLRRPVNVPLDIFSEEIRFYELGE 139 (514)
T ss_dssp HHHHHTSCCCCCTTSCHHHHHHHHHHTTCCH
T ss_pred HHHhcCCccccCCcccHHHHHHHHHhcCCCH
Confidence 99999 9987644 24566889999999998
No 37
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.01 E-value=1.7 Score=30.47 Aligned_cols=35 Identities=9% Similarity=0.047 Sum_probs=31.0
Q ss_pred eeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHh
Q 035516 108 KMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQS 148 (167)
Q Consensus 108 ~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~ 148 (167)
.-.|+++|...++..|+.++.++ |.++|.+|+...
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~------L~~~a~~fi~~n 39 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPE------LYTAAKHCAKTH 39 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHT
T ss_pred hccCCHHHHHHHHHHHHHcCCHH------HHHHHHHHHHHH
Confidence 34688999999999999999998 999999999754
No 38
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=69.30 E-value=1 Score=25.17 Aligned_cols=15 Identities=40% Similarity=0.468 Sum_probs=13.2
Q ss_pred CchhhHHHccccccc
Q 035516 114 SNVAPLRCAGEYLEM 128 (167)
Q Consensus 114 ~nv~~ll~AA~~L~m 128 (167)
.||+.|+.||+||+=
T Consensus 3 ~nvq~LLeAAeyLEr 17 (26)
T 1pd7_B 3 MNIQMLLEAADYLER 17 (26)
T ss_dssp CSTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 589999999999874
No 39
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=62.31 E-value=3.8 Score=29.93 Aligned_cols=46 Identities=15% Similarity=0.146 Sum_probs=36.1
Q ss_pred HHHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhh
Q 035516 95 ETFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSV 149 (167)
Q Consensus 95 ~~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v 149 (167)
...+...+|+-. .++.+|+..++..|..++++. |.+.|.+|+.++.
T Consensus 119 ~l~~~c~~~l~~---~l~~~n~~~~~~~A~~~~~~~------L~~~~~~~i~~~~ 164 (172)
T 3htm_A 119 RLKVMCEDALCS---NLSVENAAEILILADLHSADQ------LKTQAVDFINYHA 164 (172)
T ss_dssp HHHHHHHHHHHH---TCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHH---hCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 344455555542 468899999999999999998 9999999998754
No 40
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=49.54 E-value=7.8 Score=31.35 Aligned_cols=45 Identities=16% Similarity=0.146 Sum_probs=34.8
Q ss_pred HHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhh
Q 035516 96 TFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSV 149 (167)
Q Consensus 96 ~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v 149 (167)
..+...+|+-. .++..|+..++..|+..++.. |.+.|.+|+..++
T Consensus 260 l~~~c~~~l~~---~~~~~n~~~~l~~A~~~~~~~------L~~~~~~~i~~~~ 304 (312)
T 3hqi_A 260 LKVMCEDALCS---NLSVENAAEILILADLHSADQ------LKTQAVDFINYHA 304 (312)
T ss_dssp HHHHHHHHHHT---TCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHc---cCCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHHH
Confidence 34444444432 367899999999999999988 9999999998754
No 41
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=42.93 E-value=14 Score=29.05 Aligned_cols=45 Identities=11% Similarity=0.120 Sum_probs=34.4
Q ss_pred HHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhh
Q 035516 96 TFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSV 149 (167)
Q Consensus 96 ~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v 149 (167)
..+...+|+-. .++.+|+..++..|+.+++.+ |.+.|.+|+....
T Consensus 119 l~~~c~~~L~~---~l~~~n~~~i~~~A~~~~~~~------L~~~~~~~i~~~f 163 (256)
T 3hve_A 119 LKTLCCEFLEG---CIAAENCIGIRDFALHYCLHH------VHYLATEYLETHF 163 (256)
T ss_dssp HHHHHHHHHHH---TCCSSTTHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh---hCCHhhHHHHHHHHHHcCcHH------HHHHHHHHHHHHH
Confidence 34444444432 467889999999999999988 9999999997654
No 42
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=39.47 E-value=15 Score=29.20 Aligned_cols=45 Identities=16% Similarity=0.254 Sum_probs=34.9
Q ss_pred HHHHHhHhhhCceeeeccCchhhHHHcccccccCchhhhhhHHHHHHHHHHHhh
Q 035516 96 TFEMVAKFCYGVKMELSSSNVAPLRCAGEYLEMTEEFAEDNLISKTERFLSQSV 149 (167)
Q Consensus 96 ~f~~ll~F~Ytg~l~is~~nv~~ll~AA~~L~m~~~~~~~nl~~~c~~FL~~~v 149 (167)
..+...+|+-. .++.+|+..++..|+.++++. |.+.|.+|+....
T Consensus 127 L~~~c~~~L~~---~l~~~n~~~i~~~A~~~~~~~------L~~~~~~~i~~~f 171 (279)
T 3i3n_A 127 LKEFCGEFLKK---KLHLSNCVAIHSLAHMYTLSQ------LALKAADMIRRNF 171 (279)
T ss_dssp HHHHHHHHHHH---HCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTH
T ss_pred HHHHHHHHHHH---cCCcchHHHHHHHHHHcCcHH------HHHHHHHHHHHHH
Confidence 34444445432 478899999999999999988 9999999997654
Done!