Query 035519
Match_columns 169
No_of_seqs 108 out of 1331
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 03:40:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035519.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035519hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02290 cytokinin trans-hydro 99.9 3.8E-21 8.1E-26 155.8 17.9 149 20-168 21-171 (516)
2 KOG0157 Cytochrome P450 CYP4/C 99.8 3.9E-19 8.5E-24 143.4 12.0 115 39-168 33-148 (497)
3 PTZ00404 cytochrome P450; Prov 99.8 1.2E-19 2.5E-24 146.0 8.5 114 37-168 25-139 (482)
4 KOG0156 Cytochrome P450 CYP2 s 99.8 9.5E-19 2.1E-23 140.1 11.0 110 42-168 27-141 (489)
5 PLN02500 cytochrome P450 90B1 99.8 1.2E-18 2.7E-23 140.4 10.1 112 42-167 39-151 (490)
6 KOG0158 Cytochrome P450 CYP3/C 99.8 2.9E-18 6.4E-23 136.5 11.4 120 33-168 23-145 (499)
7 PLN02196 abscisic acid 8'-hydr 99.8 3.4E-18 7.4E-23 137.0 10.9 110 41-168 35-145 (463)
8 PLN00168 Cytochrome P450; Prov 99.8 5.3E-18 1.2E-22 137.6 11.5 113 40-168 34-151 (519)
9 PLN02687 flavonoid 3'-monooxyg 99.8 3.5E-18 7.6E-23 138.6 9.5 109 42-168 35-147 (517)
10 PLN02971 tryptophan N-hydroxyl 99.8 1E-17 2.2E-22 136.7 11.7 109 41-166 57-171 (543)
11 PLN02394 trans-cinnamate 4-mon 99.8 1.1E-17 2.3E-22 135.3 11.5 111 41-168 30-144 (503)
12 PLN02169 fatty acid (omega-1)- 99.7 2.8E-17 6E-22 132.9 12.2 116 36-166 26-144 (500)
13 PLN02183 ferulate 5-hydroxylas 99.7 1.3E-17 2.8E-22 135.3 10.0 110 41-168 36-149 (516)
14 PLN02774 brassinosteroid-6-oxi 99.7 1.1E-17 2.4E-22 134.0 8.9 107 42-167 32-139 (463)
15 PLN00110 flavonoid 3',5'-hydro 99.7 2.8E-17 6.1E-22 133.0 11.2 115 36-168 26-144 (504)
16 PLN02302 ent-kaurenoic acid ox 99.7 4.1E-16 8.8E-21 125.6 14.8 112 42-168 43-158 (490)
17 PLN03195 fatty acid omega-hydr 99.7 1.1E-16 2.3E-21 129.9 11.2 109 41-168 30-142 (516)
18 PLN03112 cytochrome P450 famil 99.7 6.4E-17 1.4E-21 131.1 9.3 110 41-168 32-145 (514)
19 PLN02987 Cytochrome P450, fami 99.7 1.4E-16 3E-21 128.0 9.3 111 42-166 31-142 (472)
20 PLN03234 cytochrome P450 83B1; 99.7 4.1E-16 8.8E-21 126.0 11.0 111 41-168 28-142 (499)
21 PLN03141 3-epi-6-deoxocathaste 99.6 4.1E-16 8.9E-21 124.6 8.3 112 42-167 8-120 (452)
22 PLN02655 ent-kaurene oxidase 99.6 1.1E-15 2.3E-20 122.7 8.5 107 43-166 1-111 (466)
23 PLN03018 homomethionine N-hydr 99.6 2.1E-15 4.6E-20 122.8 9.1 106 42-164 41-151 (534)
24 PLN02738 carotene beta-ring hy 99.6 1.7E-15 3.7E-20 125.4 8.3 121 31-168 105-241 (633)
25 PLN02966 cytochrome P450 83A1 99.6 3E-15 6.5E-20 121.1 9.5 110 41-168 29-143 (502)
26 PLN02936 epsilon-ring hydroxyl 99.6 4.6E-15 9.9E-20 119.8 10.0 112 44-168 15-126 (489)
27 PF00067 p450: Cytochrome P450 99.6 1.6E-15 3.4E-20 119.7 7.0 105 43-163 1-109 (463)
28 PLN02648 allene oxide synthase 99.5 1.7E-14 3.7E-19 116.0 4.0 113 40-168 16-144 (480)
29 PLN02426 cytochrome P450, fami 99.4 8.1E-12 1.8E-16 101.3 12.5 86 81-168 63-150 (502)
30 KOG0159 Cytochrome P450 CYP11/ 99.3 7E-12 1.5E-16 99.4 9.2 114 42-169 51-171 (519)
31 KOG0684 Cytochrome P450 [Secon 99.1 5E-10 1.1E-14 87.5 8.2 108 43-168 33-143 (486)
32 COG2124 CypX Cytochrome P450 [ 98.1 1.1E-05 2.5E-10 64.1 6.8 85 83-168 27-118 (411)
33 PF15330 SIT: SHP2-interacting 51.8 32 0.00069 22.1 3.8 13 48-60 45-57 (107)
34 PF08780 NTase_sub_bind: Nucle 44.0 48 0.001 21.8 3.8 52 112-165 46-100 (124)
35 PF13625 Helicase_C_3: Helicas 40.0 1.1E+02 0.0023 20.1 5.6 39 79-119 75-113 (129)
36 PRK02302 hypothetical protein; 35.1 98 0.0021 19.2 3.9 35 85-119 20-54 (89)
37 PRK02886 hypothetical protein; 32.8 1.1E+02 0.0025 18.9 3.9 35 85-119 18-52 (87)
38 PF13893 RRM_5: RNA recognitio 32.3 86 0.0019 16.8 3.6 34 85-118 2-39 (56)
39 PHA02902 putative IMV membrane 31.5 77 0.0017 18.3 2.8 14 15-28 11-24 (70)
40 PF05961 Chordopox_A13L: Chord 28.4 1.3E+02 0.0028 17.6 3.5 12 12-23 10-21 (68)
41 PF09902 DUF2129: Uncharacteri 25.3 1.6E+02 0.0034 17.5 3.8 34 86-119 15-48 (71)
42 PHA01327 hypothetical protein 25.2 27 0.00059 18.2 0.2 18 139-156 12-29 (49)
43 PF15050 SCIMP: SCIMP protein 25.1 1.3E+02 0.0028 19.9 3.3 10 19-28 22-31 (133)
44 KOG3653 Transforming growth fa 23.8 1.8E+02 0.004 24.2 4.7 49 89-137 221-270 (534)
45 COG4471 Uncharacterized protei 22.6 2E+02 0.0044 17.8 4.3 35 85-119 19-53 (90)
46 PF05084 GRA6: Granule antigen 22.2 1.6E+02 0.0034 20.6 3.5 18 12-29 154-171 (215)
47 PF08887 GAD-like: GAD-like do 21.9 2.3E+02 0.005 18.2 4.2 38 78-119 30-67 (109)
No 1
>PLN02290 cytokinin trans-hydroxylase
Probab=99.88 E-value=3.8e-21 Score=155.80 Aligned_cols=149 Identities=32% Similarity=0.593 Sum_probs=111.2
Q ss_pred HHHHHhhhhhhhHHhHHHhhhcCCCCCCcccccCCHHHHHHHhhhhcCCCc-ccccccccCchHHHHHHHHHhCCeEeec
Q 035519 20 LIRFINKLWWNPIWTQSQMRSQGIKGPSYKFIHGNTKEIINMTNEIMSSPM-ELTHQIFPRVYPHVYSWIKLYGTNFLMW 98 (169)
Q Consensus 20 l~~~~~~~~~~~~~~~~~~~~~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~yG~~~~~~ 98 (169)
+...+..|++.+++.+.+++++++|||+++|++||+.++...........+ ...+++..+....+.++.++||+++.+|
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~ 100 (516)
T PLN02290 21 AYDTISCYFLTPRRIKKIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYW 100 (516)
T ss_pred HHHHHHHHhccHHHHHHHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEc
Confidence 334455677888999999999999999999999999888642111000000 0112223344556789999999999999
Q ss_pred cCCccEEEEcCHHHHHHHHhhCCCCCCCCCch-hhhHhhcCCCccccCCchHHHHhhhhcCCCCHHHHhhc
Q 035519 99 NGLQPQLVVAEPDLIKEILNDKDRAYPKREPT-NFIKKFLGDGLVTTQGEKWFKQRKLANHAFHVETLKVN 168 (169)
Q Consensus 99 ~~~~~~v~i~~p~~~~~il~~~~~~~~k~~~~-~~~~~~~g~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~ 168 (169)
+|+.++|+++|||.+++++.++...+.++... ......+|.|+++++|+.|+++|+++++.|+.++++.+
T Consensus 101 ~g~~~~vvv~dp~~v~~il~~~~~~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~ 171 (516)
T PLN02290 101 NGTEPRLCLTETELIKELLTKYNTVTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRLKGY 171 (516)
T ss_pred cCCccEEEECCHHHHHHHHhcCCCCCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHHHHH
Confidence 99999999999999999998764333555411 12445678899999999999999999999999988765
No 2
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.80 E-value=3.9e-19 Score=143.40 Aligned_cols=115 Identities=37% Similarity=0.607 Sum_probs=100.4
Q ss_pred hhcCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHh
Q 035519 39 RSQGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILN 118 (169)
Q Consensus 39 ~~~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~ 118 (169)
..+.+|||+++|++|++.++.... .++..+..++..+||++|+.|++|.++|+++|||.+++|+.
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~ 97 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPL---------------EEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILK 97 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcch---------------hHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHh
Confidence 445789999999999999997642 13478999999999999999999999999999999999997
Q ss_pred hCCCCCCCCCchh-hhHhhcCCCccccCCchHHHHhhhhcCCCCHHHHhhc
Q 035519 119 DKDRAYPKREPTN-FIKKFLGDGLVTTQGEKWFKQRKLANHAFHVETLKVN 168 (169)
Q Consensus 119 ~~~~~~~k~~~~~-~~~~~~g~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~ 168 (169)
++.+.+.++..+. .+.+++|+|+++++|+.|+++||+++|+|+.+.|+++
T Consensus 98 ~~~~~~~k~~~~~~~~~~~lG~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~ 148 (497)
T KOG0157|consen 98 SSNENYPKGPDYPESLKPWLGDGLLFSDGEKWHKHRKLLTPAFHFEILKSF 148 (497)
T ss_pred cCcccCCCchhHHHHHHHHhcCccccCCchHHHHHHhhccHhhhHHHHHHH
Confidence 6666677776344 5889999999999999999999999999999999876
No 3
>PTZ00404 cytochrome P450; Provisional
Probab=99.80 E-value=1.2e-19 Score=146.01 Aligned_cols=114 Identities=25% Similarity=0.373 Sum_probs=93.2
Q ss_pred HhhhcCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHH
Q 035519 37 QMRSQGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEI 116 (169)
Q Consensus 37 ~~~~~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~i 116 (169)
+.+..++|||+++|++|++.++.. ..+..+.+++++||+++++++++.++|+++|||+++++
T Consensus 25 ~~~~~~~pgp~~~p~~G~~~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~i 86 (482)
T PTZ00404 25 KIHKNELKGPIPIPILGNLHQLGN------------------LPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREM 86 (482)
T ss_pred hccCCCCCCCCCCCeeccHhhhcc------------------cHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHH
Confidence 455678999999999999987743 13778999999999999999999999999999999999
Q ss_pred HhhCCCCCCCCCchhh-hHhhcCCCccccCCchHHHHhhhhcCCCCHHHHhhc
Q 035519 117 LNDKDRAYPKREPTNF-IKKFLGDGLVTTQGEKWFKQRKLANHAFHVETLKVN 168 (169)
Q Consensus 117 l~~~~~~~~k~~~~~~-~~~~~g~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~ 168 (169)
+.++.+.|.++..... ....+++|+++.+|+.|+++|++++++|+.++++++
T Consensus 87 l~~~~~~~~~r~~~~~~~~~~~~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~ 139 (482)
T PTZ00404 87 FVDNFDNFSDRPKIPSIKHGTFYHGIVTSSGEYWKRNREIVGKAMRKTNLKHI 139 (482)
T ss_pred HHhcchhhcCCCCcceeeeeccCCceeccChHHHHHHHHHHHHHHhhhccccH
Confidence 9876656754431222 122347899999999999999999999999888765
No 4
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.79 E-value=9.5e-19 Score=140.13 Aligned_cols=110 Identities=25% Similarity=0.327 Sum_probs=89.2
Q ss_pred CCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhCC
Q 035519 42 GIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDKD 121 (169)
Q Consensus 42 ~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~~ 121 (169)
-+|||+++|++||++++... ..++.+.++.++||+++.+|+|..++|+++|+|.++|++.+++
T Consensus 27 lPPGP~~lPiIGnl~~l~~~-----------------~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d 89 (489)
T KOG0156|consen 27 LPPGPPPLPIIGNLHQLGSL-----------------PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQD 89 (489)
T ss_pred CCcCCCCCCccccHHHcCCC-----------------chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCC
Confidence 56999999999999998643 1488999999999999999999999999999999999999999
Q ss_pred CCCC-CCCchhhhHhhc--CCCcccc-CCchHHHHhhhhc-CCCCHHHHhhc
Q 035519 122 RAYP-KREPTNFIKKFL--GDGLVTT-QGEKWFKQRKLAN-HAFHVETLKVN 168 (169)
Q Consensus 122 ~~~~-k~~~~~~~~~~~--g~~l~~~-~g~~w~~~R~~~~-~~fs~~~l~~~ 168 (169)
..|. |+........+. +.|++++ .|+.|+.+||+.. ..|+...++++
T Consensus 90 ~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~ 141 (489)
T KOG0156|consen 90 LEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSF 141 (489)
T ss_pred ccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhh
Confidence 9994 554112234444 3788888 5999999999775 46777766653
No 5
>PLN02500 cytochrome P450 90B1
Probab=99.78 E-value=1.2e-18 Score=140.40 Aligned_cols=112 Identities=17% Similarity=0.125 Sum_probs=88.9
Q ss_pred CCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhCC
Q 035519 42 GIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDKD 121 (169)
Q Consensus 42 ~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~~ 121 (169)
-+|||+++|++|++..+..... ...+++++.++.++||+++.++++++++|+++|||++++++.+++
T Consensus 39 ~PPgp~~~PiiGn~~~~~~~~~-------------~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~ 105 (490)
T PLN02500 39 LPPGNMGWPFLGETIGYLKPYS-------------ATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEG 105 (490)
T ss_pred CCCCCcCCCchhhHHHHHhhcc-------------cCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCC
Confidence 4689999999999876543211 013467889999999999999999999999999999999998877
Q ss_pred CCCCCCCchhhhHhhcC-CCccccCCchHHHHhhhhcCCCCHHHHhh
Q 035519 122 RAYPKREPTNFIKKFLG-DGLVTTQGEKWFKQRKLANHAFHVETLKV 167 (169)
Q Consensus 122 ~~~~k~~~~~~~~~~~g-~~l~~~~g~~w~~~R~~~~~~fs~~~l~~ 167 (169)
..|.+.. ......++| .++++.+|+.|+++|+++++.|+..+++.
T Consensus 106 ~~f~~~~-~~~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~ 151 (490)
T PLN02500 106 RLFECSY-PRSIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRT 151 (490)
T ss_pred CeEEeeC-chHHHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHH
Confidence 6664333 222344556 47888899999999999999999988875
No 6
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.77 E-value=2.9e-18 Score=136.53 Aligned_cols=120 Identities=27% Similarity=0.347 Sum_probs=95.8
Q ss_pred HhHHHhhhcCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHH
Q 035519 33 WTQSQMRSQGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDL 112 (169)
Q Consensus 33 ~~~~~~~~~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~ 112 (169)
+...+|+++|+|+|+++|++|++..+...... .......+.+. |+++.++.+.+|.+++.|||+
T Consensus 23 ~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~---------------~~~~~~~~~~~-~~~~G~y~~~~p~l~v~D~el 86 (499)
T KOG0158|consen 23 WTYSYWRRRGIPGPKPLPFLGNLPGMLKRERP---------------GDLLLDIYTKY-RPVVGIYEGRQPALLVSDPEL 86 (499)
T ss_pred hhhhhhccCCCCCCCCCCcEecHHHHHhccCc---------------HHHHHHHHhcC-CCEEEEEecCCcceEecCHHH
Confidence 33446777899999999999999998765421 13344444444 999999999999999999999
Q ss_pred HHHHHhhCCCCCCC--CCchhhhH-hhcCCCccccCCchHHHHhhhhcCCCCHHHHhhc
Q 035519 113 IKEILNDKDRAYPK--REPTNFIK-KFLGDGLVTTQGEKWFKQRKLANHAFHVETLKVN 168 (169)
Q Consensus 113 ~~~il~~~~~~~~k--~~~~~~~~-~~~g~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~ 168 (169)
+|+|+.++.++|.. +.....-. ++...+++.++|+.||++|..++|+||..++++|
T Consensus 87 ik~I~ik~F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m 145 (499)
T KOG0158|consen 87 IKEILIKDFDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKM 145 (499)
T ss_pred HHHHHHHhCccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHhhccccchhhHHHH
Confidence 99999999999943 33233323 4555889999999999999999999999999986
No 7
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.77 E-value=3.4e-18 Score=136.97 Aligned_cols=110 Identities=22% Similarity=0.189 Sum_probs=88.9
Q ss_pred cCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhC
Q 035519 41 QGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDK 120 (169)
Q Consensus 41 ~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~ 120 (169)
+.+|||+++|++|++.++.... .+.++.+++++||++++++++++++|+++|||.+++++.++
T Consensus 35 ~~Ppgp~~~P~iG~~~~~~~~~-----------------~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~ 97 (463)
T PLN02196 35 PLPPGTMGWPYVGETFQLYSQD-----------------PNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTK 97 (463)
T ss_pred CCCCCCCCCCccchHHHHHhcC-----------------HHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCC
Confidence 4567777899999988764321 36789999999999999999999999999999999999876
Q ss_pred CCCCCCCCchhhhHhhcC-CCccccCCchHHHHhhhhcCCCCHHHHhhc
Q 035519 121 DRAYPKREPTNFIKKFLG-DGLVTTQGEKWFKQRKLANHAFHVETLKVN 168 (169)
Q Consensus 121 ~~~~~k~~~~~~~~~~~g-~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~ 168 (169)
.+.| ++.........+| .++++.+|+.|+++|+++++.|++++++++
T Consensus 98 ~~~~-~~~~~~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~ 145 (463)
T PLN02196 98 SHLF-KPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNM 145 (463)
T ss_pred CCcc-cccCchHHHHHcCcccccccCcHHHHHHHHHHHHhcChHHHHHH
Confidence 6556 3431222344566 578889999999999999999999988765
No 8
>PLN00168 Cytochrome P450; Provisional
Probab=99.76 E-value=5.3e-18 Score=137.61 Aligned_cols=113 Identities=22% Similarity=0.315 Sum_probs=87.6
Q ss_pred hcCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhh
Q 035519 40 SQGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILND 119 (169)
Q Consensus 40 ~~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~ 119 (169)
.+-+|||+++|++|++..+.... ..+++.+.++.++||++|++++|+.++|+++|||++++++.+
T Consensus 34 ~~lpPgp~~~pl~G~l~~~~~~~---------------~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~ 98 (519)
T PLN00168 34 RRLPPGPPAVPLLGSLVWLTNSS---------------ADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVE 98 (519)
T ss_pred CCCCcCCCCCcccccHHhhcccc---------------ccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHh
Confidence 34578999999999987553211 124678999999999999999999999999999999999998
Q ss_pred CCCCCCCCCchhhhHhhcC--CCccc--cCCchHHHHhh-hhcCCCCHHHHhhc
Q 035519 120 KDRAYPKREPTNFIKKFLG--DGLVT--TQGEKWFKQRK-LANHAFHVETLKVN 168 (169)
Q Consensus 120 ~~~~~~k~~~~~~~~~~~g--~~l~~--~~g~~w~~~R~-~~~~~fs~~~l~~~ 168 (169)
++..|.+++ .....+++| .+++. .+|+.|+++|| +++++|+.+++++|
T Consensus 99 ~~~~f~~rp-~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~ 151 (519)
T PLN00168 99 RGAALADRP-AVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLF 151 (519)
T ss_pred cCCccccCC-cccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHH
Confidence 787785444 222333444 23444 57999999986 78999999998876
No 9
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.76 E-value=3.5e-18 Score=138.59 Aligned_cols=109 Identities=20% Similarity=0.296 Sum_probs=86.5
Q ss_pred CCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhCC
Q 035519 42 GIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDKD 121 (169)
Q Consensus 42 ~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~~ 121 (169)
.+|||+++|++|++..+.. .+++++.++.++||+++++++++.++++++|||++++++.++.
T Consensus 35 ~pPgp~~~P~iG~~~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~ 96 (517)
T PLN02687 35 LPPGPRGWPVLGNLPQLGP------------------KPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHD 96 (517)
T ss_pred CCccCCCCCccccHHhcCC------------------chhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcc
Confidence 4689999999999877632 1377899999999999999999999999999999999999877
Q ss_pred CCCCCCCchhhhHhhc--CCC-ccccCCchHHHHhhhhc-CCCCHHHHhhc
Q 035519 122 RAYPKREPTNFIKKFL--GDG-LVTTQGEKWFKQRKLAN-HAFHVETLKVN 168 (169)
Q Consensus 122 ~~~~k~~~~~~~~~~~--g~~-l~~~~g~~w~~~R~~~~-~~fs~~~l~~~ 168 (169)
..|.++........+. +.+ ++..+|+.|+++|++++ +.|+.+++++|
T Consensus 97 ~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~ 147 (517)
T PLN02687 97 ANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDF 147 (517)
T ss_pred hhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHh
Confidence 7786554122222222 234 55567999999999998 89999888765
No 10
>PLN02971 tryptophan N-hydroxylase
Probab=99.75 E-value=1e-17 Score=136.69 Aligned_cols=109 Identities=21% Similarity=0.284 Sum_probs=84.4
Q ss_pred cCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhC-CeEeeccCCccEEEEcCHHHHHHHHhh
Q 035519 41 QGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYG-TNFLMWNGLQPQLVVAEPDLIKEILND 119 (169)
Q Consensus 41 ~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG-~~~~~~~~~~~~v~i~~p~~~~~il~~ 119 (169)
.-+|||+++|++|+++.+..+. ..+.++.++.++|| +++.+++|+.++|+++|||.+++++.+
T Consensus 57 ~lPPGP~~lPiiGnl~~l~~~~----------------~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~ 120 (543)
T PLN02971 57 PLPPGPTGFPIVGMIPAMLKNR----------------PVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQ 120 (543)
T ss_pred CCCcCCCCCCcccchHHhccCC----------------cHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHh
Confidence 3568999999999998874321 12567889999999 799999999999999999999999998
Q ss_pred CCCCCCCCCchhhhHhhcCCC----ccccCCchHHHHhhhhcC-CCCHHHHh
Q 035519 120 KDRAYPKREPTNFIKKFLGDG----LVTTQGEKWFKQRKLANH-AFHVETLK 166 (169)
Q Consensus 120 ~~~~~~k~~~~~~~~~~~g~~----l~~~~g~~w~~~R~~~~~-~fs~~~l~ 166 (169)
++..|.+++ .....+.+++| ++..+|+.|+++|+++++ .+++..++
T Consensus 121 ~~~~f~~rp-~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~ 171 (543)
T PLN02971 121 QDALFASRP-LTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHR 171 (543)
T ss_pred cchhhcCCC-cccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHH
Confidence 887886555 22344455554 666779999999999964 55554443
No 11
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.75 E-value=1.1e-17 Score=135.32 Aligned_cols=111 Identities=24% Similarity=0.361 Sum_probs=87.1
Q ss_pred cCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhC
Q 035519 41 QGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDK 120 (169)
Q Consensus 41 ~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~ 120 (169)
..+|||+++|++|++..+... ..+..+.+++++||++++++++++++|+++|||.+++++.++
T Consensus 30 ~~pPgp~~~p~~g~l~~~~~~-----------------~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~ 92 (503)
T PLN02394 30 KLPPGPAAVPIFGNWLQVGDD-----------------LNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQ 92 (503)
T ss_pred CCCcCCCCCCeeeeHHhcCCC-----------------chhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhC
Confidence 367999999999998766321 126788999999999999999999999999999999999877
Q ss_pred CCCCCCCCchhhhHhhcCC---CccccCCchHHHHhhhhc-CCCCHHHHhhc
Q 035519 121 DRAYPKREPTNFIKKFLGD---GLVTTQGEKWFKQRKLAN-HAFHVETLKVN 168 (169)
Q Consensus 121 ~~~~~k~~~~~~~~~~~g~---~l~~~~g~~w~~~R~~~~-~~fs~~~l~~~ 168 (169)
+..|.++........+.|. +++..+|+.|+++|+.++ +.|++++++.|
T Consensus 93 ~~~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~ 144 (503)
T PLN02394 93 GVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQY 144 (503)
T ss_pred CccccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHh
Confidence 7667544312223444443 366677999999999996 89999888764
No 12
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.74 E-value=2.8e-17 Score=132.90 Aligned_cols=116 Identities=22% Similarity=0.301 Sum_probs=93.5
Q ss_pred HHhhhcCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEe---eccCCccEEEEcCHHH
Q 035519 36 SQMRSQGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFL---MWNGLQPQLVVAEPDL 112 (169)
Q Consensus 36 ~~~~~~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~---~~~~~~~~v~i~~p~~ 112 (169)
++|+++++|||+++|++|++..+..... .+++.+.+..++||..+. .|+++.++++++|||.
T Consensus 26 ~~~~~~~~p~p~~~pl~G~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~ 90 (500)
T PLN02169 26 IHKKPHGQPILKNWPFLGMLPGMLHQIP---------------RIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKN 90 (500)
T ss_pred HHhccCCCCCCCCCCcccchHHHHHccC---------------cHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHH
Confidence 3456679999999999999977754321 246667777777886655 6889999999999999
Q ss_pred HHHHHhhCCCCCCCCCchhhhHhhcCCCccccCCchHHHHhhhhcCCCCHHHHh
Q 035519 113 IKEILNDKDRAYPKREPTNFIKKFLGDGLVTTQGEKWFKQRKLANHAFHVETLK 166 (169)
Q Consensus 113 ~~~il~~~~~~~~k~~~~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~fs~~~l~ 166 (169)
+++|+.++.+.|.++.......+++|+|+++++|+.|+++||+++|+|+..+++
T Consensus 91 i~~il~~~~~~~~k~~~~~~~~~~~g~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~ 144 (500)
T PLN02169 91 IHHILSSNFGNYPKGPEFKKIFDVLGEGILTVDFELWEDLRKSNHALFHNQDFI 144 (500)
T ss_pred HHHHHhhCcccCCCcHHHHHHHHhhcCcccccCcHHHHHHHHHHHHHhhhHHHH
Confidence 999999877778887633345677899999999999999999999999988764
No 13
>PLN02183 ferulate 5-hydroxylase
Probab=99.74 E-value=1.3e-17 Score=135.27 Aligned_cols=110 Identities=22% Similarity=0.252 Sum_probs=86.0
Q ss_pred cCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhC
Q 035519 41 QGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDK 120 (169)
Q Consensus 41 ~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~ 120 (169)
+.+|||+++|++|++..+.. ..+..+.++.++||++|++++++.++|+++|||++++++.++
T Consensus 36 ~~ppgp~~~Pl~G~l~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~ 97 (516)
T PLN02183 36 PYPPGPKGLPIIGNMLMMDQ------------------LTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQ 97 (516)
T ss_pred CCCcCCCCCCeeccHHhcCC------------------cchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhh
Confidence 46799999999999876521 125678899999999999999999999999999999999987
Q ss_pred CCCCCCCCchhhhHhhc---CCCccccCCchHHHHhhh-hcCCCCHHHHhhc
Q 035519 121 DRAYPKREPTNFIKKFL---GDGLVTTQGEKWFKQRKL-ANHAFHVETLKVN 168 (169)
Q Consensus 121 ~~~~~k~~~~~~~~~~~---g~~l~~~~g~~w~~~R~~-~~~~fs~~~l~~~ 168 (169)
++.|.+.........+. +++++..+|+.|+++|++ ++++|+.++++.|
T Consensus 98 ~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~ 149 (516)
T PLN02183 98 DSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESW 149 (516)
T ss_pred hhhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHH
Confidence 77775544121222232 355777889999999998 5799999887754
No 14
>PLN02774 brassinosteroid-6-oxidase
Probab=99.73 E-value=1.1e-17 Score=133.99 Aligned_cols=107 Identities=16% Similarity=0.123 Sum_probs=87.5
Q ss_pred CCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhCC
Q 035519 42 GIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDKD 121 (169)
Q Consensus 42 ~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~~ 121 (169)
-+|||+++|++|++..+..+. ..++.++.++||++++++++++++++++|||++++++.++.
T Consensus 32 ~ppgp~~~P~~G~~~~~~~~~------------------~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~ 93 (463)
T PLN02774 32 LPPGTMGWPLFGETTEFLKQG------------------PDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEG 93 (463)
T ss_pred CCCCCCCCCchhhHHHHHHhh------------------HHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCC
Confidence 347888899999998875422 45788999999999999999999999999999999998777
Q ss_pred CCCCCCCchhhhHhhcCC-CccccCCchHHHHhhhhcCCCCHHHHhh
Q 035519 122 RAYPKREPTNFIKKFLGD-GLVTTQGEKWFKQRKLANHAFHVETLKV 167 (169)
Q Consensus 122 ~~~~k~~~~~~~~~~~g~-~l~~~~g~~w~~~R~~~~~~fs~~~l~~ 167 (169)
..|.++. .....+++|. |++..+|+.|+++|+++++.|+++.++.
T Consensus 94 ~~~~~~~-~~~~~~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~ 139 (463)
T PLN02774 94 KGLVPGY-PQSMLDILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRD 139 (463)
T ss_pred CeEEecC-CHHHHHHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHH
Confidence 6665444 2333456664 6888889999999999999999988764
No 15
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.73 E-value=2.8e-17 Score=132.98 Aligned_cols=115 Identities=20% Similarity=0.225 Sum_probs=89.2
Q ss_pred HHhhhcCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHH
Q 035519 36 SQMRSQGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKE 115 (169)
Q Consensus 36 ~~~~~~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~ 115 (169)
.....+-+|||+++|++|++..+.. ..+.++.++.++||+++++++|++++|+++|||++++
T Consensus 26 ~~~~~~~pPgp~~~Pl~G~l~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~ 87 (504)
T PLN00110 26 PKPSRKLPPGPRGWPLLGALPLLGN------------------MPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARA 87 (504)
T ss_pred hcccCCCcccCCCCCeeechhhcCC------------------chHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHH
Confidence 3344456799999999999866531 1267899999999999999999999999999999999
Q ss_pred HHhhCCCCCCCCCchhhhH-hhcC--CCccccCCchHHHHhhhhcC-CCCHHHHhhc
Q 035519 116 ILNDKDRAYPKREPTNFIK-KFLG--DGLVTTQGEKWFKQRKLANH-AFHVETLKVN 168 (169)
Q Consensus 116 il~~~~~~~~k~~~~~~~~-~~~g--~~l~~~~g~~w~~~R~~~~~-~fs~~~l~~~ 168 (169)
++.++...|.++....... ...+ ++++..+|+.|+++|+.+++ .|+.++++.|
T Consensus 88 vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~ 144 (504)
T PLN00110 88 FLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDW 144 (504)
T ss_pred HHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHh
Confidence 9998777786554122222 2233 45667779999999999985 7999888765
No 16
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.71 E-value=4.1e-16 Score=125.62 Aligned_cols=112 Identities=21% Similarity=0.259 Sum_probs=86.2
Q ss_pred CCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCC--eEeeccCCccEEEEcCHHHHHHHHhh
Q 035519 42 GIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGT--NFLMWNGLQPQLVVAEPDLIKEILND 119 (169)
Q Consensus 42 ~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~--~~~~~~~~~~~v~i~~p~~~~~il~~ 119 (169)
-+|||+++|++|+++.+...... ...++++.+++++||+ ++++++++.++++++|||.+++|+.+
T Consensus 43 lpPgp~~~PilG~l~~~~~~~~~-------------~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~ 109 (490)
T PLN02302 43 LPPGDLGWPVIGNMWSFLRAFKS-------------SNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTD 109 (490)
T ss_pred CcCCCCCCCccccHHHHHHhccc-------------CCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcC
Confidence 46899999999999887643211 2347789999999997 78999999999999999999999986
Q ss_pred CCCCCCCCCchhhhHhhcCC-CccccCCchHHHHhhhhcCCCC-HHHHhhc
Q 035519 120 KDRAYPKREPTNFIKKFLGD-GLVTTQGEKWFKQRKLANHAFH-VETLKVN 168 (169)
Q Consensus 120 ~~~~~~k~~~~~~~~~~~g~-~l~~~~g~~w~~~R~~~~~~fs-~~~l~~~ 168 (169)
+ +.|.++. .......+|. +++..+|+.|+++|+.+++.|+ +++++.+
T Consensus 110 ~-~~f~~~~-~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~ 158 (490)
T PLN02302 110 D-DAFEPGW-PESTVELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTY 158 (490)
T ss_pred C-CccccCC-chhHHHHhccccccccCcHHHHHHHHHHHhccCCHHHHHHH
Confidence 4 4675543 2222235564 4566789999999999999995 6777654
No 17
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.70 E-value=1.1e-16 Score=129.94 Aligned_cols=109 Identities=28% Similarity=0.473 Sum_probs=87.4
Q ss_pred cCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHh---CCeEeeccCCccEEEEcCHHHHHHHH
Q 035519 41 QGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLY---GTNFLMWNGLQPQLVVAEPDLIKEIL 117 (169)
Q Consensus 41 ~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y---G~~~~~~~~~~~~v~i~~p~~~~~il 117 (169)
+++|||+++|++|+++.+... +..+.++.++| |+++.+++++.++++++|||.+++|+
T Consensus 30 ~~~pgp~~~p~~G~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il 90 (516)
T PLN03195 30 RNRKGPKSWPIIGAALEQLKN-------------------YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVL 90 (516)
T ss_pred cccCCCCCCCeecchHHHHhc-------------------cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHH
Confidence 367999999999998766431 22345555566 79999999999999999999999999
Q ss_pred hhCCCCCCCCCchh-hhHhhcCCCccccCCchHHHHhhhhcCCCCHHHHhhc
Q 035519 118 NDKDRAYPKREPTN-FIKKFLGDGLVTTQGEKWFKQRKLANHAFHVETLKVN 168 (169)
Q Consensus 118 ~~~~~~~~k~~~~~-~~~~~~g~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~ 168 (169)
.++...|.++..+. ....+.|+|+++.+|+.|+++||++++.|+.++++.|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~ 142 (516)
T PLN03195 91 KTNFANYPKGEVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDF 142 (516)
T ss_pred hhCccccCCcHhHHHHHHHHhcCeeeccCcHHHHHHHHhcchhhhHHHHHHH
Confidence 87656677765222 3455678899988999999999999999999888764
No 18
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.70 E-value=6.4e-17 Score=131.13 Aligned_cols=110 Identities=24% Similarity=0.325 Sum_probs=86.8
Q ss_pred cCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhC
Q 035519 41 QGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDK 120 (169)
Q Consensus 41 ~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~ 120 (169)
+.+|||+++|++|++.++.. ..+.++.+++++||+++++++++.++++++|||++++++.++
T Consensus 32 ~~ppgp~~~pl~G~~~~~~~------------------~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~ 93 (514)
T PLN03112 32 RLPPGPPRWPIVGNLLQLGP------------------LPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQ 93 (514)
T ss_pred CCccCCCCCCeeeeHHhcCC------------------chHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhC
Confidence 35799999999999977632 126788999999999999999999999999999999999887
Q ss_pred CCCCCCCCchhh-hHhhcC--CCccccCCchHHHHhhhh-cCCCCHHHHhhc
Q 035519 121 DRAYPKREPTNF-IKKFLG--DGLVTTQGEKWFKQRKLA-NHAFHVETLKVN 168 (169)
Q Consensus 121 ~~~~~k~~~~~~-~~~~~g--~~l~~~~g~~w~~~R~~~-~~~fs~~~l~~~ 168 (169)
++.|.++..... ....+| .+++..+|+.|+++|+++ ++.|+.++++.+
T Consensus 94 ~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~ 145 (514)
T PLN03112 94 DDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESF 145 (514)
T ss_pred CcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHh
Confidence 778876552222 222344 335557799999999995 578999988865
No 19
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.68 E-value=1.4e-16 Score=128.03 Aligned_cols=111 Identities=19% Similarity=0.231 Sum_probs=86.2
Q ss_pred CCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhCC
Q 035519 42 GIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDKD 121 (169)
Q Consensus 42 ~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~~ 121 (169)
-+|||.++|++|+++++...... .+++.++.++.++||++++++++++++++++|||.+++++.++.
T Consensus 31 lppgp~~~P~iG~~~~~~~~~~~-------------~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~ 97 (472)
T PLN02987 31 LPPGSLGLPLVGETLQLISAYKT-------------ENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEG 97 (472)
T ss_pred CcCCCcCCCchhhHHHHHhhccc-------------CChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCC
Confidence 45788899999999887532100 12367788999999999999999999999999999999999877
Q ss_pred CCCCCCCchhhhHhhcC-CCccccCCchHHHHhhhhcCCCCHHHHh
Q 035519 122 RAYPKREPTNFIKKFLG-DGLVTTQGEKWFKQRKLANHAFHVETLK 166 (169)
Q Consensus 122 ~~~~k~~~~~~~~~~~g-~~l~~~~g~~w~~~R~~~~~~fs~~~l~ 166 (169)
+.|.++. .....+++| +|+++++|+.|+++|+++.+.++.+.++
T Consensus 98 ~~f~~~~-~~~~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~ 142 (472)
T PLN02987 98 KLFECSY-PGSISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIK 142 (472)
T ss_pred ceEEecC-cHHHHHHhCcccccccCcHHHHHHHHHHHHhcChHHHH
Confidence 7775554 333456666 6899999999999999987654544443
No 20
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.67 E-value=4.1e-16 Score=126.01 Aligned_cols=111 Identities=22% Similarity=0.256 Sum_probs=84.8
Q ss_pred cCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhC
Q 035519 41 QGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDK 120 (169)
Q Consensus 41 ~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~ 120 (169)
+.+|||+++|++|++.++... +.+.++.++.++||++|++++++.++|+++|||.+++|+.++
T Consensus 28 ~~pPgp~~~P~iG~~~~~~~~-----------------~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~ 90 (499)
T PLN03234 28 RLPPGPKGLPIIGNLHQMEKF-----------------NPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQ 90 (499)
T ss_pred CCCcCCCCCCeeccHHhcCCC-----------------CccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhC
Confidence 357999999999998776321 136688999999999999999999999999999999999987
Q ss_pred CCCCCCCCchhhhH--hhcCCCccc-cCCchHHHHhhhh-cCCCCHHHHhhc
Q 035519 121 DRAYPKREPTNFIK--KFLGDGLVT-TQGEKWFKQRKLA-NHAFHVETLKVN 168 (169)
Q Consensus 121 ~~~~~k~~~~~~~~--~~~g~~l~~-~~g~~w~~~R~~~-~~~fs~~~l~~~ 168 (169)
+..|.+++...... ...+.++.. ..++.|+++|+.+ .+.|++++++.|
T Consensus 91 ~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~ 142 (499)
T PLN03234 91 DLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASF 142 (499)
T ss_pred CccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHh
Confidence 77786555222221 122444333 3478999999974 699999888765
No 21
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.65 E-value=4.1e-16 Score=124.63 Aligned_cols=112 Identities=18% Similarity=0.185 Sum_probs=88.9
Q ss_pred CCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhCC
Q 035519 42 GIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDKD 121 (169)
Q Consensus 42 ~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~~ 121 (169)
-+|||.++|++|+++.+....- ...++.++.++.++||++|++++++.++|+++||+++++++.+++
T Consensus 8 ~Ppg~~~~P~iG~~~~l~~~~~-------------~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~ 74 (452)
T PLN03141 8 LPKGSLGWPVIGETLDFISCAY-------------SSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDG 74 (452)
T ss_pred CCCCCCCCCchhhHHHHHhhcc-------------cCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCC
Confidence 4579989999999988754210 012477889999999999999999999999999999999999877
Q ss_pred CCCCCCCchhhhHhhcCC-CccccCCchHHHHhhhhcCCCCHHHHhh
Q 035519 122 RAYPKREPTNFIKKFLGD-GLVTTQGEKWFKQRKLANHAFHVETLKV 167 (169)
Q Consensus 122 ~~~~k~~~~~~~~~~~g~-~l~~~~g~~w~~~R~~~~~~fs~~~l~~ 167 (169)
+.|.... ......++|. +++..+|+.|++.|+++++.|+..+++.
T Consensus 75 ~~~~~~~-~~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~ 120 (452)
T PLN03141 75 NAFVPAY-PKSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKA 120 (452)
T ss_pred CeeeccC-chhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHH
Confidence 6665332 2334566774 6888899999999999999998776654
No 22
>PLN02655 ent-kaurene oxidase
Probab=99.63 E-value=1.1e-15 Score=122.67 Aligned_cols=107 Identities=14% Similarity=0.229 Sum_probs=83.0
Q ss_pred CCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhCCC
Q 035519 43 IKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDKDR 122 (169)
Q Consensus 43 ~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~~~ 122 (169)
+|||+++|++|+++++... .++..+.++.++||++|+++++++++++++|||++++|+.++..
T Consensus 1 ppgp~~lP~iG~l~~~~~~-----------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~ 63 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEK-----------------KPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFS 63 (466)
T ss_pred CcCCCCCCccccHHHcCCC-----------------chhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCc
Confidence 4899999999999887421 13778999999999999999999999999999999999998887
Q ss_pred CCCCCCchhhhHhhcCCC--ccccC-CchHHHHhhhhc-CCCCHHHHh
Q 035519 123 AYPKREPTNFIKKFLGDG--LVTTQ-GEKWFKQRKLAN-HAFHVETLK 166 (169)
Q Consensus 123 ~~~k~~~~~~~~~~~g~~--l~~~~-g~~w~~~R~~~~-~~fs~~~l~ 166 (169)
.|.++........+.|++ +++.+ |+.|+++|+.+. +.|+...++
T Consensus 64 ~f~~r~~~~~~~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~ 111 (466)
T PLN02655 64 SISTRKLSKALTVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQK 111 (466)
T ss_pred hhcCCChhhHHHHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHH
Confidence 886555233344455533 55555 999999998665 566655444
No 23
>PLN03018 homomethionine N-hydroxylase
Probab=99.62 E-value=2.1e-15 Score=122.82 Aligned_cols=106 Identities=17% Similarity=0.192 Sum_probs=78.0
Q ss_pred CCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHh-CCeEeeccCCccEEEEcCHHHHHHHHhhC
Q 035519 42 GIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLY-GTNFLMWNGLQPQLVVAEPDLIKEILNDK 120 (169)
Q Consensus 42 ~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-G~~~~~~~~~~~~v~i~~p~~~~~il~~~ 120 (169)
-+|||+++|++|+++++...... ..+..+..++| |+++++++|+.++|+++|||.+++++.++
T Consensus 41 ~PPgp~~~P~iGnl~~l~~~~~~----------------~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~ 104 (534)
T PLN03018 41 LPPGPPGWPILGNLPELIMTRPR----------------SKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRER 104 (534)
T ss_pred CCcCCCCCCeeccHHHhccCCCc----------------chhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhC
Confidence 47899999999999887432110 12344555555 79999999999999999999999999987
Q ss_pred CCCCCCCCchhhhHhhcCC---CccccC-CchHHHHhhhhcCCCCHHH
Q 035519 121 DRAYPKREPTNFIKKFLGD---GLVTTQ-GEKWFKQRKLANHAFHVET 164 (169)
Q Consensus 121 ~~~~~k~~~~~~~~~~~g~---~l~~~~-g~~w~~~R~~~~~~fs~~~ 164 (169)
++.|.+++...... .++. ++++.+ |+.|+++|+++++.|....
T Consensus 105 ~~~f~~rp~~~~~~-~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~ 151 (534)
T PLN03018 105 DADLADRPQLSIME-TIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVK 151 (534)
T ss_pred cHhhcCCCCchhhh-hhccCCCceEecCCCHHHHHHHHHHHHHhcCHH
Confidence 77786554122233 3332 477765 9999999999999875443
No 24
>PLN02738 carotene beta-ring hydroxylase
Probab=99.61 E-value=1.7e-15 Score=125.35 Aligned_cols=121 Identities=24% Similarity=0.421 Sum_probs=93.1
Q ss_pred hHHhHHHhhhcCCCCCCccc----------------ccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCe
Q 035519 31 PIWTQSQMRSQGIKGPSYKF----------------IHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTN 94 (169)
Q Consensus 31 ~~~~~~~~~~~~~Pgp~~~p----------------i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~ 94 (169)
+..++..+.+.++|||+-.. ..|++..+. .+.++..+.+++++||++
T Consensus 105 ~~~~~~~~~~~~~pgp~laa~t~~ye~y~~~~~~~~~~G~l~~i~-----------------~g~~~~~l~~lh~kYGpI 167 (633)
T PLN02738 105 PATLRNGLAKLGPPGELLAFLFTWVEAGEGYPKIPEAKGSISAVR-----------------GEAFFIPLYELFLTYGGI 167 (633)
T ss_pred hHHHHhhhhhCCCCCchHHHHHcccccccccccCccccCcHHHhc-----------------CchHHHHHHHHHHHhCCE
Confidence 34556667788999999321 123333321 123478899999999999
Q ss_pred EeeccCCccEEEEcCHHHHHHHHhhCCCCCCCCCchhhhHhhcCCCccccCCchHHHHhhhhcCCCCHHHHhhc
Q 035519 95 FLMWNGLQPQLVVAEPDLIKEILNDKDRAYPKREPTNFIKKFLGDGLVTTQGEKWFKQRKLANHAFHVETLKVN 168 (169)
Q Consensus 95 ~~~~~~~~~~v~i~~p~~~~~il~~~~~~~~k~~~~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~ 168 (169)
+++++|+.++++++||+.+++|+.++.+.|.++........+.+.|+++.+|+.|+++|+.+++.|+.++++.+
T Consensus 168 ~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~rRr~l~p~Fs~~~v~~l 241 (633)
T PLN02738 168 FRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAM 241 (633)
T ss_pred EEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHHHHhccHhhhHHHHHHH
Confidence 99999999999999999999999987777877652223444567889989999999999999999999887654
No 25
>PLN02966 cytochrome P450 83A1
Probab=99.61 E-value=3e-15 Score=121.14 Aligned_cols=110 Identities=22% Similarity=0.344 Sum_probs=84.5
Q ss_pred cCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhC
Q 035519 41 QGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDK 120 (169)
Q Consensus 41 ~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~ 120 (169)
+-+|||+++|++|++..+... +++.++.+++++||+++++++++.++|+++|||.+++++.++
T Consensus 29 ~~ppgp~~~p~~G~l~~l~~~-----------------~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~ 91 (502)
T PLN02966 29 KLPPGPSPLPVIGNLLQLQKL-----------------NPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQ 91 (502)
T ss_pred CCCcCCCCCCeeccHHhcCCC-----------------ChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhC
Confidence 356999999999999776321 236789999999999999999999999999999999999987
Q ss_pred CCCCCCCCchhhhHhhc--C-CCc-cccCCchHHHHhhh-hcCCCCHHHHhhc
Q 035519 121 DRAYPKREPTNFIKKFL--G-DGL-VTTQGEKWFKQRKL-ANHAFHVETLKVN 168 (169)
Q Consensus 121 ~~~~~k~~~~~~~~~~~--g-~~l-~~~~g~~w~~~R~~-~~~~fs~~~l~~~ 168 (169)
+..|.+.. ........ | .++ +...|+.|+++|++ ++++|++++++.|
T Consensus 92 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~ 143 (502)
T PLN02966 92 DVNFADRP-PHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATF 143 (502)
T ss_pred cccccCCC-CCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHH
Confidence 76776544 12112222 2 223 34559999999998 8899999888654
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=99.60 E-value=4.6e-15 Score=119.76 Aligned_cols=112 Identities=20% Similarity=0.352 Sum_probs=94.4
Q ss_pred CCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhCCCC
Q 035519 44 KGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDKDRA 123 (169)
Q Consensus 44 Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~~~~ 123 (169)
-|-.|+|++|..++...+... ++.+..+.+++++||+++++++++.++++++|||++++|+.+++..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~ 81 (489)
T PLN02936 15 GDDSGIPVADAKLEDVTDLLG-------------GALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSK 81 (489)
T ss_pred CCCCCCccHHhHHhhHHHHhc-------------cHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhcccc
Confidence 577789999999998876542 3457899999999999999999999999999999999999876678
Q ss_pred CCCCCchhhhHhhcCCCccccCCchHHHHhhhhcCCCCHHHHhhc
Q 035519 124 YPKREPTNFIKKFLGDGLVTTQGEKWFKQRKLANHAFHVETLKVN 168 (169)
Q Consensus 124 ~~k~~~~~~~~~~~g~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~ 168 (169)
|.++........++|+++++++|+.|+++||++++.|+.++++++
T Consensus 82 f~~~~~~~~~~~~~~~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~ 126 (489)
T PLN02936 82 YAKGLVAEVSEFLFGSGFAIAEGELWTARRRAVVPSLHRRYLSVM 126 (489)
T ss_pred ccCcchhhhhHHHhcCccccCCchHHHHHHHhhcCccCHHHHHHH
Confidence 877652333455678899999999999999999999998887754
No 27
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.60 E-value=1.6e-15 Score=119.72 Aligned_cols=105 Identities=33% Similarity=0.531 Sum_probs=87.6
Q ss_pred CCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhCCC
Q 035519 43 IKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDKDR 122 (169)
Q Consensus 43 ~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~~~ 122 (169)
+|||+++|++|++..+.... .+++.+.+++++||++|+++++++++++++|||.+++|+.++..
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~----------------~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~ 64 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKG----------------NPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSK 64 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTH----------------HHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTT
T ss_pred CcCCCCcCceeEHHHhcCCC----------------cHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccc
Confidence 58999999999999998522 23788999999999999999999999999999999999998665
Q ss_pred CCCCCCchhh----hHhhcCCCccccCCchHHHHhhhhcCCCCHH
Q 035519 123 AYPKREPTNF----IKKFLGDGLVTTQGEKWFKQRKLANHAFHVE 163 (169)
Q Consensus 123 ~~~k~~~~~~----~~~~~g~~l~~~~g~~w~~~R~~~~~~fs~~ 163 (169)
.+........ .....+.+++..+|+.|+++|+++++.|+..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~ 109 (463)
T PF00067_consen 65 YFSFRPRPPWFEIFRGPFGGKGLFFSDGERWRRQRRLLAPAFSSK 109 (463)
T ss_dssp TEEEEHCHHHHHHHHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5644321122 2346689999999999999999999999987
No 28
>PLN02648 allene oxide synthase
Probab=99.49 E-value=1.7e-14 Score=115.97 Aligned_cols=113 Identities=12% Similarity=0.062 Sum_probs=87.3
Q ss_pred hcCCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCC-eEeeccCCccE-------EEEcCHH
Q 035519 40 SQGIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGT-NFLMWNGLQPQ-------LVVAEPD 111 (169)
Q Consensus 40 ~~~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~-~~~~~~~~~~~-------v~i~~p~ 111 (169)
.+.+||+.++|++|++.+++..... .+...++.+..++||+ +|+++++|.|+ |+++|||
T Consensus 16 ~~~PPg~~g~P~iG~~~~~~~~~~~-------------~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e 82 (480)
T PLN02648 16 LREIPGSYGLPFLGAIKDRLDYFYF-------------QGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQK 82 (480)
T ss_pred CCCCCCCCCCcCcchhhhhhhHHHh-------------cChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCC
Confidence 3567899999999999987763221 2346899999999998 99999999766 9999999
Q ss_pred HHHHHHhh----CCCCCCCCCchhhhHhhcC-C---CccccCCchHHHHhhhhcCCCCHHHHhhc
Q 035519 112 LIKEILND----KDRAYPKREPTNFIKKFLG-D---GLVTTQGEKWFKQRKLANHAFHVETLKVN 168 (169)
Q Consensus 112 ~~~~il~~----~~~~~~k~~~~~~~~~~~g-~---~l~~~~g~~w~~~R~~~~~~fs~~~l~~~ 168 (169)
.++.++.+ +.+.+.... ..... ++| + +++..+|+.|+++|+++.+.|+ .+++.|
T Consensus 83 ~~~~v~~~~~~~~~~~~~~~~-~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~ 144 (480)
T PLN02648 83 SFPVLFDVSKVDKRDVFTGTY-MPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRF 144 (480)
T ss_pred ceeeeecchhccccccceeee-ccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-Hhhhhh
Confidence 99999974 343344433 33344 777 4 6777889999999999999998 455554
No 29
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.38 E-value=8.1e-12 Score=101.27 Aligned_cols=86 Identities=19% Similarity=0.335 Sum_probs=69.8
Q ss_pred hHHHHHHHHHhC-CeEeeccCCccEEEEcCHHHHHHHHhhCCCCCCCCCch-hhhHhhcCCCccccCCchHHHHhhhhcC
Q 035519 81 YPHVYSWIKLYG-TNFLMWNGLQPQLVVAEPDLIKEILNDKDRAYPKREPT-NFIKKFLGDGLVTTQGEKWFKQRKLANH 158 (169)
Q Consensus 81 ~~~~~~~~~~yG-~~~~~~~~~~~~v~i~~p~~~~~il~~~~~~~~k~~~~-~~~~~~~g~~l~~~~g~~w~~~R~~~~~ 158 (169)
.+++.++.++++ .+++++..+. ++++|||.+++|+.++.+.|.|+... ..+.+++|+|+++++|+.|+++||++++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi~~~~g~~wk~~Rk~l~~ 140 (502)
T PLN02426 63 CDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGIFNVDGDSWRFQRKMASL 140 (502)
T ss_pred HHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCceeecCcHHHHHHHHHhHh
Confidence 556666777777 5777776664 89999999999999877788887623 3356778999999999999999999999
Q ss_pred CCCHHHHhhc
Q 035519 159 AFHVETLKVN 168 (169)
Q Consensus 159 ~fs~~~l~~~ 168 (169)
.|+.++++.+
T Consensus 141 ~fs~~~l~~~ 150 (502)
T PLN02426 141 ELGSVSIRSY 150 (502)
T ss_pred hhhhHHHHHH
Confidence 9998887754
No 30
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.34 E-value=7e-12 Score=99.36 Aligned_cols=114 Identities=18% Similarity=0.191 Sum_probs=91.0
Q ss_pred CCCCCCcccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeec-cCCccEEEEcCHHHHHHHHhhC
Q 035519 42 GIKGPSYKFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMW-NGLQPQLVVAEPDLIKEILNDK 120 (169)
Q Consensus 42 ~~Pgp~~~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~-~~~~~~v~i~~p~~~~~il~~~ 120 (169)
.||||.++|++|.+..+..... ..+++.....+++||++|+.. +|+...|++.||++++.+++++
T Consensus 51 ~IP~p~~~~~l~~l~~~~~~~~--------------~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~E 116 (519)
T KOG0159|consen 51 EIPGPKGLPFLGLLWIWRAGGA--------------TKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNE 116 (519)
T ss_pred hcCCCCCccHHHHHHHHHhhhh--------------hHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcC
Confidence 4899999999998876333222 246899999999999999999 8888999999999999999998
Q ss_pred CCCCCCC-C-c-hhhhHhhcC--CCccccCCchHHHHhhhhcCC-CCHHHHhhcC
Q 035519 121 DRAYPKR-E-P-TNFIKKFLG--DGLVTTQGEKWFKQRKLANHA-FHVETLKVNA 169 (169)
Q Consensus 121 ~~~~~k~-~-~-~~~~~~~~g--~~l~~~~g~~w~~~R~~~~~~-fs~~~l~~~~ 169 (169)
+..-.++ . . +..-++..+ .|++..+|++|.+.|..++|. +++++++.|+
T Consensus 117 G~~P~Rp~~~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl 171 (519)
T KOG0159|consen 117 GKYPFRPLLIEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYL 171 (519)
T ss_pred CCCCCcccccchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHh
Confidence 8544453 2 1 122455664 789999999999999999985 6788888774
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.09 E-value=5e-10 Score=87.50 Aligned_cols=108 Identities=15% Similarity=0.036 Sum_probs=89.0
Q ss_pred CCCCCc-ccccCCHHHHHHHhhhhcCCCcccccccccCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhhCC
Q 035519 43 IKGPSY-KFIHGNTKEIINMTNEIMSSPMELTHQIFPRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILNDKD 121 (169)
Q Consensus 43 ~Pgp~~-~pi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~~ 121 (169)
+|-..+ .|.+|+...+.++ +.+++++..+|||++|.+.++|+.+.++.||+....++++..
T Consensus 33 PPli~gwiP~lG~a~~fgk~------------------P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~ 94 (486)
T KOG0684|consen 33 PPLIKGWIPWLGSALAFGKD------------------PLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKL 94 (486)
T ss_pred CcccccCcchhhHHHHhccC------------------HHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcc
Confidence 455555 6899999998764 388999999999999999999999999999999999998754
Q ss_pred CCCCCCCch-hhhHhhcCCCccccC-CchHHHHhhhhcCCCCHHHHhhc
Q 035519 122 RAYPKREPT-NFIKKFLGDGLVTTQ-GEKWFKQRKLANHAFHVETLKVN 168 (169)
Q Consensus 122 ~~~~k~~~~-~~~~~~~g~~l~~~~-g~~w~~~R~~~~~~fs~~~l~~~ 168 (169)
+..+-...+ ....+.+|.|+.... +....++.+++..++..+++++|
T Consensus 95 ~~ld~~~~~~~l~~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~ 143 (486)
T KOG0684|consen 95 ADLDFEEAYSKLTTPVFGKGVVYDVPNHVMMEQKKFFKSALGGVALKSL 143 (486)
T ss_pred cccCHHHHHHHhhhhhcCCCccccCCCchHHHHHHHHHHHhchhhHHHH
Confidence 455544423 337788999988765 88899999999999998888876
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.08 E-value=1.1e-05 Score=64.10 Aligned_cols=85 Identities=26% Similarity=0.322 Sum_probs=63.5
Q ss_pred HHHHHHHHhCCeEeeccCCcc--EEEEcCHHHHHHHHhhCCCCCCCCC---chhh-hHhhcCCC-ccccCCchHHHHhhh
Q 035519 83 HVYSWIKLYGTNFLMWNGLQP--QLVVAEPDLIKEILNDKDRAYPKRE---PTNF-IKKFLGDG-LVTTQGEKWFKQRKL 155 (169)
Q Consensus 83 ~~~~~~~~yG~~~~~~~~~~~--~v~i~~p~~~~~il~~~~~~~~k~~---~~~~-~~~~~g~~-l~~~~g~~w~~~R~~ 155 (169)
......+.||..+.....++. .+++++++.++++++++. .+.+.. .... ..+.+|.+ +++.+|+.|+++||+
T Consensus 27 ~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rkl 105 (411)
T COG2124 27 FLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKL 105 (411)
T ss_pred hHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHHHH
Confidence 445566667777777766655 799999999999998742 222222 1121 45677766 888999999999999
Q ss_pred hcCCCCHHHHhhc
Q 035519 156 ANHAFHVETLKVN 168 (169)
Q Consensus 156 ~~~~fs~~~l~~~ 168 (169)
++++|+++.+++|
T Consensus 106 ~~~~F~~~~~~~~ 118 (411)
T COG2124 106 LAPAFTPRALRGY 118 (411)
T ss_pred hccccCHHHHHHH
Confidence 9999999999876
No 33
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=51.77 E-value=32 Score=22.15 Aligned_cols=13 Identities=15% Similarity=-0.130 Sum_probs=9.0
Q ss_pred cccccCCHHHHHH
Q 035519 48 YKFIHGNTKEIIN 60 (169)
Q Consensus 48 ~~pi~G~~~~~~~ 60 (169)
.-|+.||+.....
T Consensus 45 ~~p~YgNL~~~q~ 57 (107)
T PF15330_consen 45 DDPCYGNLELQQT 57 (107)
T ss_pred CCccccccccccC
Confidence 4689999766543
No 34
>PF08780 NTase_sub_bind: Nucleotidyltransferase substrate binding protein like; InterPro: IPR010235 The member of this family from Haemophilus influenzae, HI0074, has been shown by crystal structure to resemble nucleotidyltransferase substrate binding proteins []. It forms a complex with HI0073 (P43933 from SWISSPROT), encoded by the adjacent gene, which contains a nucleotidyltransferase nucleotide binding domain (IPR002934 from INTERPRO). Double- and single-stranded DNA binding assays showed no evidence of DNA binding to HI0074 or to HI0073/HI0074 complex despite the suggestive shape of the putative binding cleft formed by the HI0074 dimer []. ; PDB: 1WWP_A 1JOG_A 1WTY_C 2YWA_B.
Probab=43.96 E-value=48 Score=21.81 Aligned_cols=52 Identities=23% Similarity=0.468 Sum_probs=32.1
Q ss_pred HHHHHHhhCCCCCCCCCchhhhHhhcCCCccccCCchHHHH---hhhhcCCCCHHHH
Q 035519 112 LIKEILNDKDRAYPKREPTNFIKKFLGDGLVTTQGEKWFKQ---RKLANHAFHVETL 165 (169)
Q Consensus 112 ~~~~il~~~~~~~~k~~~~~~~~~~~g~~l~~~~g~~w~~~---R~~~~~~fs~~~l 165 (169)
.+|+.+..++..-..++ ...++.-+..|++ .+++.|.++ |...++.+..+..
T Consensus 46 ~lK~~L~~~G~~~~~sp-r~~~r~A~~~glI-~d~e~Wl~m~~~RN~tsHtYde~~a 100 (124)
T PF08780_consen 46 TLKDYLEYEGISECNSP-RDVFREAFKAGLI-DDGEIWLDMLEDRNLTSHTYDEETA 100 (124)
T ss_dssp HHHHHHHHCTSSCCTSH-HHHHHHHHHTTSS-SHHHHHHHHHHHHHHGGGTTSHHHH
T ss_pred HHHHHHHHhCCcccCCH-HHHHHHHHHcCCC-CCHHHHHHHHHHhccccCCCCHHHH
Confidence 45666666443222222 3336666678888 678899877 6677787776543
No 35
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=39.95 E-value=1.1e+02 Score=20.09 Aligned_cols=39 Identities=28% Similarity=0.467 Sum_probs=30.4
Q ss_pred CchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhh
Q 035519 79 RVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILND 119 (169)
Q Consensus 79 ~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~ 119 (169)
.+...+.+|.++||.+-.. .+...+...|++.++++...
T Consensus 75 ~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~ 113 (129)
T PF13625_consen 75 NVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLAD 113 (129)
T ss_pred HHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhC
Confidence 4567899999999987432 24678889999999999865
No 36
>PRK02302 hypothetical protein; Provisional
Probab=35.10 E-value=98 Score=19.24 Aligned_cols=35 Identities=9% Similarity=0.094 Sum_probs=26.6
Q ss_pred HHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhh
Q 035519 85 YSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILND 119 (169)
Q Consensus 85 ~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~ 119 (169)
..--++||++..+.=-.+-+++-+|-+.++++...
T Consensus 20 ~r~LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k 54 (89)
T PRK02302 20 ARKLSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE 54 (89)
T ss_pred HHHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence 33446799998776556678888999999998854
No 37
>PRK02886 hypothetical protein; Provisional
Probab=32.80 E-value=1.1e+02 Score=18.86 Aligned_cols=35 Identities=11% Similarity=0.299 Sum_probs=26.6
Q ss_pred HHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhh
Q 035519 85 YSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILND 119 (169)
Q Consensus 85 ~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~ 119 (169)
..-.++||++..+.=-..-+++-+|-+.+.++...
T Consensus 18 ~r~LrkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k 52 (87)
T PRK02886 18 AKQLRKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK 52 (87)
T ss_pred HHHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence 33446799998776556678888999999998854
No 38
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=32.33 E-value=86 Score=16.75 Aligned_cols=34 Identities=9% Similarity=-0.012 Sum_probs=23.4
Q ss_pred HHHHHHhCCeEeeccCC----ccEEEEcCHHHHHHHHh
Q 035519 85 YSWIKLYGTNFLMWNGL----QPQLVVAEPDLIKEILN 118 (169)
Q Consensus 85 ~~~~~~yG~~~~~~~~~----~~~v~i~~p~~~~~il~ 118 (169)
.+..++||++-.+.+.. .-.|-..+++.++....
T Consensus 2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~ 39 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE 39 (56)
T ss_dssp HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 45677899887765433 34677779999888875
No 39
>PHA02902 putative IMV membrane protein; Provisional
Probab=31.53 E-value=77 Score=18.33 Aligned_cols=14 Identities=7% Similarity=0.389 Sum_probs=6.2
Q ss_pred HHHHHHHHHHhhhh
Q 035519 15 LFLLVLIRFINKLW 28 (169)
Q Consensus 15 ~~~~~l~~~~~~~~ 28 (169)
+.+.+++++++..+
T Consensus 11 v~v~Ivclliya~Y 24 (70)
T PHA02902 11 VIVIIFCLLIYAAY 24 (70)
T ss_pred HHHHHHHHHHHHHH
Confidence 33444444444443
No 40
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=28.44 E-value=1.3e+02 Score=17.60 Aligned_cols=12 Identities=8% Similarity=0.359 Sum_probs=4.6
Q ss_pred HHHHHHHHHHHH
Q 035519 12 FCLLFLLVLIRF 23 (169)
Q Consensus 12 ~~~~~~~~l~~~ 23 (169)
+|++++.++++.
T Consensus 10 ICVaii~lIlY~ 21 (68)
T PF05961_consen 10 ICVAIIGLILYG 21 (68)
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 41
>PF09902 DUF2129: Uncharacterized protein conserved in bacteria (DUF2129); InterPro: IPR016979 This is a group of uncharacterised conserved proteins.
Probab=25.28 E-value=1.6e+02 Score=17.46 Aligned_cols=34 Identities=9% Similarity=0.245 Sum_probs=25.8
Q ss_pred HHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhh
Q 035519 86 SWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILND 119 (169)
Q Consensus 86 ~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~ 119 (169)
+--++||++..+.=-..-+++-+|-|.+.++...
T Consensus 15 r~L~kfG~i~Y~Skk~kYvvlYvn~~~~e~~~~k 48 (71)
T PF09902_consen 15 RQLRKFGDIHYVSKKMKYVVLYVNEEDVEEIIEK 48 (71)
T ss_pred HhHhhcccEEEEECCccEEEEEECHHHHHHHHHH
Confidence 3456799998775555678888999999988854
No 42
>PHA01327 hypothetical protein
Probab=25.22 E-value=27 Score=18.23 Aligned_cols=18 Identities=17% Similarity=0.651 Sum_probs=13.7
Q ss_pred CCccccCCchHHHHhhhh
Q 035519 139 DGLVTTQGEKWFKQRKLA 156 (169)
Q Consensus 139 ~~l~~~~g~~w~~~R~~~ 156 (169)
++++...|+.|...|..+
T Consensus 12 ~~vinehge~wqer~drm 29 (49)
T PHA01327 12 NNVINEHGEEWQERKDRM 29 (49)
T ss_pred chHHHhhHHHHHHHHHHH
Confidence 567777799999887654
No 43
>PF15050 SCIMP: SCIMP protein
Probab=25.07 E-value=1.3e+02 Score=19.89 Aligned_cols=10 Identities=20% Similarity=0.039 Sum_probs=4.0
Q ss_pred HHHHHHhhhh
Q 035519 19 VLIRFINKLW 28 (169)
Q Consensus 19 ~l~~~~~~~~ 28 (169)
.+.+++|...
T Consensus 22 ~lglIlyCvc 31 (133)
T PF15050_consen 22 VLGLILYCVC 31 (133)
T ss_pred HHHHHHHHHH
Confidence 3334444333
No 44
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=23.77 E-value=1.8e+02 Score=24.20 Aligned_cols=49 Identities=14% Similarity=0.146 Sum_probs=26.1
Q ss_pred HHhCCeEeeccCCccEEEEcCHHHHHHHHhhCCCCCCCCC-chhhhHhhc
Q 035519 89 KLYGTNFLMWNGLQPQLVVAEPDLIKEILNDKDRAYPKRE-PTNFIKKFL 137 (169)
Q Consensus 89 ~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~~~~~~~k~~-~~~~~~~~~ 137 (169)
-+||.++.-.+-++.+-|=.=|+--++-+.++-+-|.-+. .+..+-+++
T Consensus 221 Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi 270 (534)
T KOG3653|consen 221 GRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFI 270 (534)
T ss_pred CccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhh
Confidence 4577777766666665554445555555544444555444 233344444
No 45
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.63 E-value=2e+02 Score=17.83 Aligned_cols=35 Identities=6% Similarity=0.132 Sum_probs=27.3
Q ss_pred HHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhh
Q 035519 85 YSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILND 119 (169)
Q Consensus 85 ~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~ 119 (169)
.+-.++||++..+.=-.+-.++-+|-+.+.+++..
T Consensus 19 aRqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k 53 (90)
T COG4471 19 ARQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK 53 (90)
T ss_pred hHHHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence 34456799998776556678889999999999854
No 46
>PF05084 GRA6: Granule antigen protein (GRA6); InterPro: IPR008119 Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage []. The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=22.18 E-value=1.6e+02 Score=20.62 Aligned_cols=18 Identities=11% Similarity=0.235 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHhhhhh
Q 035519 12 FCLLFLLVLIRFINKLWW 29 (169)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~ 29 (169)
+..+++++.+.++.+.|.
T Consensus 154 IG~~VlA~~VA~L~~~F~ 171 (215)
T PF05084_consen 154 IGAVVLAVSVAMLTWFFL 171 (215)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444444
No 47
>PF08887 GAD-like: GAD-like domain; InterPro: IPR014983 This domain is functionally uncharacterised, but it appears to be distantly related to the GAD domain IPR004115 from INTERPRO.
Probab=21.93 E-value=2.3e+02 Score=18.23 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=27.1
Q ss_pred cCchHHHHHHHHHhCCeEeeccCCccEEEEcCHHHHHHHHhh
Q 035519 78 PRVYPHVYSWIKLYGTNFLMWNGLQPQLVVAEPDLIKEILND 119 (169)
Q Consensus 78 ~~~~~~~~~~~~~yG~~~~~~~~~~~~v~i~~p~~~~~il~~ 119 (169)
..+.+.+.++-++||=. -.+.-.+-++||+..++++..
T Consensus 30 ~~lP~~Ll~~W~~~G~g----~~~dG~f~~vnP~dy~~vl~~ 67 (109)
T PF08887_consen 30 GKLPDELLEYWKEYGFG----GYGDGLFWLVNPDDYEDVLDE 67 (109)
T ss_pred CCCcHHHHHHHHHcCCc----hhcCcEEEEECHHHHHHHHHH
Confidence 34567777777788832 113456888999999999965
Done!