Query 035521
Match_columns 302
No_of_seqs 153 out of 898
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 05:28:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035521.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035521hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v5n_A PDI-like hypothetical p 99.5 2.4E-15 8.3E-20 117.1 3.6 66 50-120 15-80 (89)
2 1v5n_A PDI-like hypothetical p 99.3 2.4E-13 8E-18 105.8 0.9 65 108-178 16-81 (89)
3 2fc7_A ZZZ3 protein; structure 97.9 1.1E-05 3.6E-10 61.6 4.1 50 30-81 21-76 (82)
4 3pfq_A PKC-B, PKC-beta, protei 97.8 8.5E-06 2.9E-10 83.3 4.0 97 16-119 37-148 (674)
5 2dip_A Zinc finger SWIM domain 97.8 5.9E-06 2E-10 65.0 1.6 46 30-81 31-78 (98)
6 3pfq_A PKC-B, PKC-beta, protei 97.7 1.9E-05 6.4E-10 80.8 3.5 99 72-178 37-150 (674)
7 2e5r_A Dystrobrevin alpha; ZZ 97.6 2.3E-05 7.9E-10 56.7 1.9 46 31-78 12-60 (63)
8 2e5r_A Dystrobrevin alpha; ZZ 97.5 3.7E-05 1.3E-09 55.6 2.3 44 88-133 12-59 (63)
9 2fc7_A ZZZ3 protein; structure 97.5 9.1E-05 3.1E-09 56.3 4.3 49 87-137 21-76 (82)
10 1tot_A CREB-binding protein; z 97.3 4.4E-05 1.5E-09 53.2 0.9 41 87-134 6-47 (52)
11 2dip_A Zinc finger SWIM domain 97.3 9.1E-05 3.1E-09 58.2 2.3 44 87-135 31-76 (98)
12 1tot_A CREB-binding protein; z 97.2 5.2E-05 1.8E-09 52.8 -0.0 42 30-79 6-48 (52)
13 2db6_A SH3 and cysteine rich d 96.8 0.00057 2E-08 50.6 2.3 52 7-61 8-62 (74)
14 1ptq_A Protein kinase C delta 96.5 0.0018 6E-08 43.9 2.9 42 17-61 1-45 (50)
15 2enz_A NPKC-theta, protein kin 96.4 0.0038 1.3E-07 44.8 4.6 44 15-61 11-57 (65)
16 2yuu_A NPKC-delta, protein kin 96.3 0.0029 9.8E-08 47.7 3.6 49 10-61 11-62 (83)
17 1faq_A RAF-1; transferase, ser 96.3 0.0034 1.2E-07 42.8 3.6 42 16-61 3-44 (52)
18 2eli_A Protein kinase C alpha 96.3 0.0059 2E-07 46.3 5.3 47 12-61 13-62 (85)
19 1kbe_A Kinase suppressor of RA 96.2 0.0033 1.1E-07 43.1 3.3 41 16-61 4-44 (49)
20 3uej_A NPKC-delta, protein kin 96.2 0.0017 5.8E-08 46.7 1.7 44 15-61 8-54 (65)
21 1kbe_A Kinase suppressor of RA 96.1 0.0042 1.5E-07 42.5 3.4 41 73-119 5-45 (49)
22 2enz_A NPKC-theta, protein kin 96.1 0.0052 1.8E-07 44.1 4.0 43 72-118 12-57 (65)
23 2enn_A NPKC-theta, protein kin 96.1 0.0029 9.9E-08 47.1 2.6 48 11-61 18-68 (77)
24 1ptq_A Protein kinase C delta 96.0 0.0034 1.2E-07 42.4 2.5 33 86-118 10-45 (50)
25 1y8f_A UNC-13 homolog A, MUNC1 96.0 0.0035 1.2E-07 45.2 2.5 42 16-60 13-57 (66)
26 1faq_A RAF-1; transferase, ser 96.0 0.0066 2.3E-07 41.3 3.8 42 72-118 3-44 (52)
27 2db6_A SH3 and cysteine rich d 95.9 0.0048 1.6E-07 45.5 3.0 44 71-118 16-62 (74)
28 2eli_A Protein kinase C alpha 95.6 0.01 3.4E-07 45.0 3.9 43 72-118 17-62 (85)
29 1rfh_A RAS association (ralgds 95.6 0.0067 2.3E-07 42.9 2.6 44 15-61 9-53 (59)
30 3uej_A NPKC-delta, protein kin 95.5 0.0067 2.3E-07 43.5 2.5 43 72-118 9-54 (65)
31 1y8f_A UNC-13 homolog A, MUNC1 95.5 0.0085 2.9E-07 43.1 2.9 43 72-118 13-58 (66)
32 2enn_A NPKC-theta, protein kin 95.5 0.009 3.1E-07 44.4 3.1 43 72-118 23-68 (77)
33 2yuu_A NPKC-delta, protein kin 95.4 0.011 3.9E-07 44.4 3.5 43 72-118 17-62 (83)
34 2fnf_X Putative RAS effector N 95.3 0.013 4.5E-07 43.1 3.6 44 15-61 22-66 (72)
35 2row_A RHO-associated protein 95.1 0.0075 2.6E-07 45.9 1.6 42 16-60 24-70 (84)
36 2fnf_X Putative RAS effector N 94.9 0.02 6.8E-07 42.1 3.5 43 72-118 23-66 (72)
37 1rfh_A RAS association (ralgds 94.9 0.016 5.5E-07 40.8 2.8 43 72-118 10-53 (59)
38 4b6d_A RAC GTPase-activating p 93.8 0.04 1.4E-06 39.2 3.0 43 72-118 8-52 (61)
39 4b6d_A RAC GTPase-activating p 93.6 0.06 2E-06 38.3 3.6 36 143-178 19-55 (61)
40 2row_A RHO-associated protein 93.5 0.022 7.6E-07 43.2 1.2 44 70-117 22-70 (84)
41 2ysm_A Myeloid/lymphoid or mix 91.3 0.42 1.5E-05 37.3 6.2 80 86-176 6-87 (111)
42 3v43_A Histone acetyltransfera 89.6 0.38 1.3E-05 37.9 4.6 97 30-151 5-111 (112)
43 1r79_A Diacylglycerol kinase, 87.9 0.14 4.9E-06 38.7 0.9 37 142-178 37-76 (84)
44 2ysm_A Myeloid/lymphoid or mix 87.7 1.6 5.5E-05 33.9 7.0 78 30-119 7-87 (111)
45 3ky9_A Proto-oncogene VAV; cal 86.6 0.39 1.3E-05 48.0 3.5 43 16-61 518-563 (587)
46 2kwj_A Zinc finger protein DPF 86.4 0.53 1.8E-05 37.2 3.5 79 89-175 3-90 (114)
47 2kwj_A Zinc finger protein DPF 85.8 0.76 2.6E-05 36.2 4.2 95 32-151 3-107 (114)
48 2vrw_B P95VAV, VAV1, proto-onc 85.3 0.53 1.8E-05 44.5 3.6 41 17-60 347-390 (406)
49 4gne_A Histone-lysine N-methyl 83.6 2.4 8.4E-05 33.2 6.1 66 29-118 14-86 (107)
50 3ky9_A Proto-oncogene VAV; cal 83.3 0.62 2.1E-05 46.5 3.2 43 72-118 518-563 (587)
51 2vrw_B P95VAV, VAV1, proto-onc 80.0 1.1 3.6E-05 42.4 3.4 43 72-118 346-391 (406)
52 3cxl_A N-chimerin; SH2, RHO-GA 77.7 1.2 4.2E-05 43.1 3.1 43 16-61 209-254 (463)
53 1r79_A Diacylglycerol kinase, 74.6 2.4 8.1E-05 31.9 3.2 43 15-60 26-72 (84)
54 4gne_A Histone-lysine N-methyl 73.1 9.3 0.00032 29.9 6.5 68 86-177 14-88 (107)
55 3cxl_A N-chimerin; SH2, RHO-GA 73.0 1.6 5.4E-05 42.4 2.5 43 73-119 210-255 (463)
56 2l5u_A Chromodomain-helicase-D 71.5 3.3 0.00011 28.8 3.3 49 29-96 10-58 (61)
57 2lri_C Autoimmune regulator; Z 71.3 3.3 0.00011 29.5 3.3 48 30-96 12-59 (66)
58 2jun_A Midline-1; B-BOX, TRIM, 71.3 2.9 0.0001 31.4 3.2 81 30-117 3-87 (101)
59 2l5u_A Chromodomain-helicase-D 69.6 2.9 9.8E-05 29.2 2.5 49 86-152 10-58 (61)
60 2ku3_A Bromodomain-containing 68.6 2.6 9E-05 30.5 2.2 47 30-95 16-65 (71)
61 1mm2_A MI2-beta; PHD, zinc fin 67.1 7.7 0.00026 26.9 4.4 48 30-96 9-56 (61)
62 2k16_A Transcription initiatio 66.5 4.2 0.00014 29.2 3.0 45 17-62 6-51 (75)
63 1we9_A PHD finger family prote 65.8 4.8 0.00016 28.0 3.1 34 29-62 5-40 (64)
64 3v43_A Histone acetyltransfera 65.8 3.9 0.00013 31.9 2.9 81 87-175 5-94 (112)
65 2ku3_A Bromodomain-containing 64.8 3.8 0.00013 29.6 2.4 49 86-152 15-66 (71)
66 2lv9_A Histone-lysine N-methyl 64.2 7.9 0.00027 29.5 4.3 32 29-61 27-59 (98)
67 1fp0_A KAP-1 corepressor; PHD 63.2 14 0.00047 27.9 5.4 49 28-95 23-71 (88)
68 1z60_A TFIIH basal transcripti 63.1 2.3 7.9E-05 29.9 1.0 30 31-60 16-46 (59)
69 3o70_A PHD finger protein 13; 62.6 6.1 0.00021 28.2 3.2 37 141-178 17-53 (68)
70 1wil_A KIAA1045 protein; ring 61.3 4.5 0.00015 30.6 2.3 61 30-95 15-75 (89)
71 1f62_A Transcription factor WS 60.5 7.3 0.00025 25.7 3.1 47 32-95 2-49 (51)
72 2k16_A Transcription initiatio 60.0 4 0.00014 29.3 1.8 38 141-178 16-53 (75)
73 2lq6_A Bromodomain-containing 59.5 4.3 0.00015 30.5 2.0 42 16-60 6-49 (87)
74 1z60_A TFIIH basal transcripti 58.9 2.9 0.0001 29.4 0.9 32 144-175 16-47 (59)
75 3u5n_A E3 ubiquitin-protein li 58.3 6.9 0.00024 33.7 3.4 61 86-164 6-66 (207)
76 1f62_A Transcription factor WS 56.8 4.2 0.00014 27.0 1.4 31 145-175 2-32 (51)
77 1xwh_A Autoimmune regulator; P 56.1 8.2 0.00028 27.1 2.9 47 30-95 8-54 (66)
78 2lv9_A Histone-lysine N-methyl 54.9 7.5 0.00026 29.6 2.7 34 143-177 28-61 (98)
79 2yt5_A Metal-response element- 54.7 11 0.00038 26.1 3.4 53 86-151 5-60 (66)
80 1we9_A PHD finger family prote 54.4 9.9 0.00034 26.3 3.1 37 142-178 5-42 (64)
81 2jun_A Midline-1; B-BOX, TRIM, 54.1 6.9 0.00024 29.3 2.4 84 87-175 3-88 (101)
82 2yt5_A Metal-response element- 53.0 9.8 0.00034 26.4 2.9 33 29-61 5-40 (66)
83 2lq6_A Bromodomain-containing 52.9 7 0.00024 29.3 2.2 43 73-119 7-51 (87)
84 3o70_A PHD finger protein 13; 51.3 13 0.00044 26.5 3.3 33 29-62 18-51 (68)
85 1fp0_A KAP-1 corepressor; PHD 50.9 24 0.00083 26.5 4.9 32 85-118 23-54 (88)
86 2yql_A PHD finger protein 21A; 50.6 13 0.00045 25.1 3.1 32 86-119 8-39 (56)
87 1wev_A Riken cDNA 1110020M19; 50.4 11 0.00036 28.2 2.9 33 30-62 16-51 (88)
88 2yql_A PHD finger protein 21A; 50.3 16 0.00054 24.7 3.5 31 29-61 8-38 (56)
89 2ct0_A Non-SMC element 1 homol 48.2 8.1 0.00028 28.1 1.8 34 84-118 12-45 (74)
90 3o36_A Transcription intermedi 47.4 13 0.00045 31.1 3.3 58 87-162 4-61 (184)
91 1joc_A EEA1, early endosomal a 46.6 6.5 0.00022 31.4 1.2 31 30-60 69-101 (125)
92 1wev_A Riken cDNA 1110020M19; 46.5 13 0.00046 27.7 2.9 33 87-119 16-51 (88)
93 1xwh_A Autoimmune regulator; P 46.2 16 0.00054 25.6 3.1 49 86-152 7-55 (66)
94 1wem_A Death associated transc 45.3 9.1 0.00031 27.5 1.7 34 143-177 16-49 (76)
95 3asl_A E3 ubiquitin-protein li 44.4 13 0.00043 26.6 2.3 31 145-175 20-50 (70)
96 2e6r_A Jumonji/ARID domain-con 43.9 13 0.00044 28.0 2.4 34 142-175 15-48 (92)
97 2lri_C Autoimmune regulator; Z 43.8 11 0.00038 26.7 1.9 48 87-152 12-59 (66)
98 3ny3_A E3 ubiquitin-protein li 43.4 8.2 0.00028 28.3 1.2 40 147-190 5-49 (75)
99 3nis_A E3 ubiquitin-protein li 43.2 13 0.00045 27.6 2.4 40 147-190 9-53 (82)
100 2puy_A PHD finger protein 21A; 42.7 20 0.00067 24.5 3.0 47 87-151 5-51 (60)
101 2puy_A PHD finger protein 21A; 42.1 21 0.00071 24.4 3.1 30 30-61 5-34 (60)
102 2e6s_A E3 ubiquitin-protein li 42.1 15 0.00052 26.8 2.5 31 145-175 28-58 (77)
103 2ct0_A Non-SMC element 1 homol 41.9 8.9 0.00031 27.9 1.2 35 142-178 14-48 (74)
104 1wep_A PHF8; structural genomi 41.8 12 0.00041 27.1 1.9 34 29-63 11-46 (79)
105 2xb1_A Pygopus homolog 2, B-ce 41.8 17 0.00059 28.0 2.9 34 30-63 3-39 (105)
106 2l43_A N-teminal domain from h 40.9 11 0.00036 28.3 1.5 35 142-176 24-60 (88)
107 1mm2_A MI2-beta; PHD, zinc fin 40.8 18 0.0006 25.0 2.6 49 86-152 8-56 (61)
108 1weo_A Cellulose synthase, cat 38.4 9 0.00031 29.2 0.7 32 30-61 16-52 (93)
109 2ffw_A Midline-1; B-BOX, ring 38.0 21 0.00072 25.9 2.7 32 29-60 29-61 (78)
110 1wew_A DNA-binding family prot 37.9 14 0.00046 26.9 1.7 36 142-178 15-52 (78)
111 2jmi_A Protein YNG1, ING1 homo 37.8 24 0.00082 26.6 3.1 32 29-61 25-59 (90)
112 1wee_A PHD finger family prote 37.6 29 0.00098 24.6 3.4 37 141-178 14-51 (72)
113 3shb_A E3 ubiquitin-protein li 37.4 20 0.0007 26.1 2.6 31 145-175 28-58 (77)
114 1wfp_A Zinc finger (AN1-like) 35.8 25 0.00087 25.7 2.8 26 30-56 25-50 (74)
115 2l43_A N-teminal domain from h 35.4 20 0.0007 26.7 2.3 49 86-152 24-75 (88)
116 1wew_A DNA-binding family prot 35.0 19 0.00064 26.1 2.0 34 29-63 15-51 (78)
117 1wfh_A Zinc finger (AN1-like) 34.0 24 0.00082 25.1 2.3 26 30-56 15-40 (64)
118 1wg2_A Zinc finger (AN1-like) 34.0 23 0.0008 25.2 2.3 26 30-56 15-40 (64)
119 2e6s_A E3 ubiquitin-protein li 33.0 28 0.00095 25.3 2.7 30 32-61 28-58 (77)
120 1weu_A Inhibitor of growth fam 31.9 47 0.0016 25.0 3.9 48 29-96 35-85 (91)
121 1wil_A KIAA1045 protein; ring 31.6 12 0.00042 28.2 0.5 62 86-151 14-75 (89)
122 3o36_A Transcription intermedi 31.5 48 0.0016 27.6 4.3 57 30-105 4-61 (184)
123 3o7a_A PHD finger protein 13 v 31.4 29 0.00098 23.0 2.3 31 148-178 8-38 (52)
124 2vpb_A Hpygo1, pygopus homolog 30.9 20 0.00068 25.3 1.5 35 29-63 7-44 (65)
125 2rsd_A E3 SUMO-protein ligase 30.8 43 0.0015 23.4 3.3 36 142-178 9-46 (68)
126 4bbq_A Lysine-specific demethy 30.3 24 0.00084 27.1 2.1 79 31-120 8-94 (117)
127 3asl_A E3 ubiquitin-protein li 30.0 26 0.00088 24.9 2.0 29 33-61 21-50 (70)
128 1wg2_A Zinc finger (AN1-like) 29.9 26 0.00089 24.9 2.0 27 87-114 15-41 (64)
129 1wfp_A Zinc finger (AN1-like) 29.9 42 0.0014 24.5 3.1 28 86-114 24-51 (74)
130 2zet_C Melanophilin; complex, 29.6 22 0.00077 29.4 1.9 47 86-151 67-116 (153)
131 1wfl_A Zinc finger protein 216 29.5 18 0.00063 26.5 1.1 26 30-56 25-50 (74)
132 2ri7_A Nucleosome-remodeling f 29.0 18 0.00061 29.9 1.2 35 141-176 6-41 (174)
133 1x4s_A Protein FON, zinc finge 28.7 25 0.00087 24.6 1.7 31 143-173 11-42 (59)
134 3c6w_A P28ING5, inhibitor of g 28.6 27 0.00092 24.0 1.9 31 30-61 9-42 (59)
135 1wff_A Riken cDNA 2810002D23 p 28.5 47 0.0016 24.9 3.3 26 30-56 25-51 (85)
136 3lqh_A Histone-lysine N-methyl 28.4 28 0.00095 29.6 2.3 32 31-62 3-39 (183)
137 3nw0_A Non-structural maintena 27.7 17 0.00058 32.1 0.8 34 143-178 180-213 (238)
138 1wfl_A Zinc finger protein 216 27.6 28 0.00096 25.5 1.8 27 87-114 25-51 (74)
139 2g6q_A Inhibitor of growth pro 27.4 28 0.00097 24.2 1.8 32 29-61 10-44 (62)
140 3t7l_A Zinc finger FYVE domain 27.4 39 0.0013 25.1 2.7 32 30-61 20-53 (90)
141 2ro1_A Transcription intermedi 27.3 52 0.0018 27.8 3.9 47 31-96 3-49 (189)
142 1wen_A Inhibitor of growth fam 27.1 45 0.0016 23.7 2.9 48 29-96 15-65 (71)
143 1wjv_A Cell growth regulating 27.0 29 0.00098 25.7 1.8 36 142-177 9-63 (79)
144 2e6r_A Jumonji/ARID domain-con 26.9 39 0.0013 25.3 2.7 49 87-151 16-65 (92)
145 1x4u_A Zinc finger, FYVE domai 26.6 45 0.0015 24.3 2.9 32 30-61 14-47 (84)
146 2yw8_A RUN and FYVE domain-con 26.6 41 0.0014 24.4 2.7 31 30-60 19-51 (82)
147 1z2q_A LM5-1; membrane protein 26.6 47 0.0016 24.3 3.0 32 30-61 21-54 (84)
148 3nw0_A Non-structural maintena 26.1 27 0.00094 30.8 1.9 32 86-118 179-210 (238)
149 1x4i_A Inhibitor of growth pro 26.1 38 0.0013 24.1 2.3 32 30-62 6-40 (70)
150 3lqh_A Histone-lysine N-methyl 26.0 33 0.0011 29.2 2.3 33 144-176 3-39 (183)
151 1vfy_A Phosphatidylinositol-3- 24.5 44 0.0015 23.7 2.4 30 31-60 12-43 (73)
152 2xb1_A Pygopus homolog 2, B-ce 24.4 53 0.0018 25.1 3.1 34 87-120 3-39 (105)
153 2rgt_A Fusion of LIM/homeobox 24.0 16 0.00053 30.1 -0.1 13 30-42 6-18 (169)
154 2ehe_A Four and A half LIM dom 24.0 1.8E+02 0.0063 20.1 6.6 13 87-99 43-55 (82)
155 3u5n_A E3 ubiquitin-protein li 23.5 60 0.0021 27.6 3.6 59 30-107 7-66 (207)
156 1wfk_A Zinc finger, FYVE domai 23.3 66 0.0022 23.8 3.3 37 141-177 7-44 (88)
157 1z2q_A LM5-1; membrane protein 23.2 62 0.0021 23.6 3.1 34 86-119 20-55 (84)
158 2vnf_A ING 4, P29ING4, inhibit 22.6 56 0.0019 22.3 2.6 33 86-119 9-44 (60)
159 1wfk_A Zinc finger, FYVE domai 22.0 60 0.002 24.0 2.8 32 30-61 9-42 (88)
160 2yw8_A RUN and FYVE domain-con 21.5 68 0.0023 23.2 3.0 33 86-118 18-52 (82)
161 2a20_A Regulating synaptic mem 21.4 70 0.0024 22.4 2.8 37 141-177 7-44 (62)
162 2jmi_A Protein YNG1, ING1 homo 21.2 70 0.0024 24.0 3.1 48 85-151 24-75 (90)
163 2ri7_A Nucleosome-remodeling f 20.9 32 0.0011 28.3 1.2 33 29-62 7-41 (174)
164 1e8j_A Rubredoxin; iron-sulfur 20.8 1.6E+02 0.0055 19.6 4.5 43 44-96 3-45 (52)
165 3shb_A E3 ubiquitin-protein li 20.1 63 0.0021 23.4 2.5 30 90-119 29-59 (77)
No 1
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.53 E-value=2.4e-15 Score=117.08 Aligned_cols=66 Identities=33% Similarity=0.706 Sum_probs=60.2
Q ss_pred CCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCCCCCCeeEEcCCCCccccccccCCCc
Q 035521 50 CNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGRQGHGFSYHCTHCDFDLHILCATKPL 120 (302)
Q Consensus 50 C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~lP~ 120 (302)
++..||+.|+.+|++|.|++||+|+|+|...+ .+.|++|++.+.+++|+|.+|+|+||+.||.+|.
T Consensus 15 ~~~~lhe~Ca~lP~~i~Hp~Hp~H~L~L~~~~-----~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~p~ 80 (89)
T 1v5n_A 15 IEAKYDEIAKDWPKKVKHVLHEEHELELTRVQ-----VYTCDKCEEEGTIWSYHCDECDFDLHAKCALNED 80 (89)
T ss_dssp HHHHHHHHTSSSCSEECCSTTTTSCEEEECCS-----SCCCTTTSCCCCSCEEECTTTCCCCCHHHHHCSS
T ss_pred HHHHHhHHHHcCCceecCCCCCCCccEEeeCC-----CeEeCCCCCcCCCcEEEcCCCCCeEcHHhcCCCC
Confidence 45689999999999999999999999998653 5789999999999999999999999999999875
No 2
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.31 E-value=2.4e-13 Score=105.82 Aligned_cols=65 Identities=32% Similarity=0.663 Sum_probs=57.6
Q ss_pred CccccccccCCCcceeccccc-ccceEeecCCCccccccccccccccccceeEEcCCCCccccccCccccCC
Q 035521 108 DFDLHILCATKPLTLIHQSHP-HQLQLTFDPPYYTEGFSCDICKKVGSAHWLYRCSLCEFDAHLDCAANLLA 178 (302)
Q Consensus 108 dfdlH~~Ca~lP~~i~h~~H~-H~L~L~~~~~~~~~~~~C~vC~k~~~~~~~YrC~~C~f~lH~~Ca~~~~~ 178 (302)
+..+|..|+.+|.+|.|+.|+ |+|+|...+ .++|++|++.. .+|+|+|..|+|++|+.|+..+..
T Consensus 16 ~~~lhe~Ca~lP~~i~Hp~Hp~H~L~L~~~~-----~~~C~~C~~~~-~~~~Y~C~~C~f~lH~~Ca~~p~~ 81 (89)
T 1v5n_A 16 EAKYDEIAKDWPKKVKHVLHEEHELELTRVQ-----VYTCDKCEEEG-TIWSYHCDECDFDLHAKCALNEDT 81 (89)
T ss_dssp HHHHHHHTSSSCSEECCSTTTTSCEEEECCS-----SCCCTTTSCCC-CSCEEECTTTCCCCCHHHHHCSSC
T ss_pred HHHHhHHHHcCCceecCCCCCCCccEEeeCC-----CeEeCCCCCcC-CCcEEEcCCCCCeEcHHhcCCCCc
Confidence 467999999999999999996 999998643 46899999875 689999999999999999998766
No 3
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=97.86 E-value=1.1e-05 Score=61.56 Aligned_cols=50 Identities=20% Similarity=0.496 Sum_probs=39.3
Q ss_pred CccCccCCC-CCCCCcEeecCC-C---CCCccccCCCCceecCCCC-CCCccccccCC
Q 035521 30 TTSCSACKL-QPSGLMYTCKPC-N---FTLHVSCTQMPQLITHPSH-PAHSLSLVPTP 81 (302)
Q Consensus 30 ~~~Cd~C~~-~~~g~~Y~C~~C-~---f~lH~~Ca~~P~~i~Hp~H-p~H~L~L~~~~ 81 (302)
.+.||+|.. +|.|.+|+|.+| | ||||..|...... ...| +.|+|+.+..+
T Consensus 21 ~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~~--~~~H~~~H~~~~i~~~ 76 (82)
T 2fc7_A 21 GFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHE--TDIHKEDHQLEPIYRS 76 (82)
T ss_dssp SCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCCC--CSSCCSSSCEEEECSC
T ss_pred cCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCccc--cCCCCCCCCEEEeeCC
Confidence 678999996 789999999999 7 9999999985321 1233 67889877654
No 4
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=97.82 E-value=8.5e-06 Score=83.29 Aligned_cols=97 Identities=22% Similarity=0.432 Sum_probs=33.8
Q ss_pred CCCCeeecCCCCCCCccCccCCCCCCC---CcEeecCCCCCCccccCCCC-cee-------c-CCCCCCCccccccCCCC
Q 035521 16 LHLLELSNPQTLNTTTSCSACKLQPSG---LMYTCKPCNFTLHVSCTQMP-QLI-------T-HPSHPAHSLSLVPTPIY 83 (302)
Q Consensus 16 ~HpL~l~~~~~~~~~~~Cd~C~~~~~g---~~Y~C~~C~f~lH~~Ca~~P-~~i-------~-Hp~Hp~H~L~L~~~~~~ 83 (302)
.|.+...... ....|+.|+.-++| ..|+|..|++.+|+.|.... ... . ......|.+......
T Consensus 37 ~H~f~~~~~~---~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~-- 111 (674)
T 3pfq_A 37 NHKFTARFFK---QPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYS-- 111 (674)
T ss_dssp --------------------------------------------------------------------CCCCCEECCS--
T ss_pred CceEEeeeCC---CCCccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCC--
Confidence 3666665443 26689999998886 67999999999999999752 110 0 001123666654332
Q ss_pred CCCceecccCCCCCCC---eeEEcCCCCccccccccCCC
Q 035521 84 PAGIFNCDGCGRQGHG---FSYHCTHCDFDLHILCATKP 119 (302)
Q Consensus 84 ~~~~~~C~~C~~~i~G---~~Y~C~~CdfdlH~~Ca~lP 119 (302)
....|+.|++.+.| ..|+|..|++.+|.+|...-
T Consensus 112 --~~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v 148 (674)
T 3pfq_A 112 --SPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNV 148 (674)
T ss_dssp --SCCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTSSS
T ss_pred --CCCCCCccccccchhhcCccccccCCcchhhhhhhcc
Confidence 36799999988765 57999999999999998753
No 5
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=97.78 E-value=5.9e-06 Score=65.01 Aligned_cols=46 Identities=24% Similarity=0.596 Sum_probs=37.8
Q ss_pred CccCccCCC-CCCCCcEeecCC-CCCCccccCCCCceecCCCCCCCccccccCC
Q 035521 30 TTSCSACKL-QPSGLMYTCKPC-NFTLHVSCTQMPQLITHPSHPAHSLSLVPTP 81 (302)
Q Consensus 30 ~~~Cd~C~~-~~~g~~Y~C~~C-~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~ 81 (302)
...||+|+. +|.|.+|+|.+| |||||..|+... . |+.|+|..+..+
T Consensus 31 gv~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~---~---H~~H~f~~i~~~ 78 (98)
T 2dip_A 31 GIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSY---C---HLSHTFTFREKR 78 (98)
T ss_dssp CCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTT---S---GGGSCEEECCSS
T ss_pred CCCCcCCCCCCcccCeEECCCCCCccHHHHHHccC---C---CCCCCeeEecCC
Confidence 589999997 799999999999 999999998743 2 467888776543
No 6
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=97.66 E-value=1.9e-05 Score=80.77 Aligned_cols=99 Identities=19% Similarity=0.370 Sum_probs=32.9
Q ss_pred CCccccccCCCCCCCceecccCCCCCCC---eeEEcCCCCccccccccCCCcc-e-------e--cccccccceEeecCC
Q 035521 72 AHSLSLVPTPIYPAGIFNCDGCGRQGHG---FSYHCTHCDFDLHILCATKPLT-L-------I--HQSHPHQLQLTFDPP 138 (302)
Q Consensus 72 ~H~L~L~~~~~~~~~~~~C~~C~~~i~G---~~Y~C~~CdfdlH~~Ca~lP~~-i-------~--h~~H~H~L~L~~~~~ 138 (302)
.|.|..... .....|+.|+.-++| ..|+|..|++.+|.+|..+... - . .+.-.|.++....
T Consensus 37 ~H~f~~~~~----~~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~-- 110 (674)
T 3pfq_A 37 NHKFTARFF----KQPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTY-- 110 (674)
T ss_dssp ---------------------------------------------------------------------CCCCCEECC--
T ss_pred CceEEeeeC----CCCCccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCC--
Confidence 365654322 236789999998877 5699999999999999875321 0 0 1112255544322
Q ss_pred Cccccccccccccccc--cceeEEcCCCCccccccCccccCC
Q 035521 139 YYTEGFSCDICKKVGS--AHWLYRCSLCEFDAHLDCAANLLA 178 (302)
Q Consensus 139 ~~~~~~~C~vC~k~~~--~~~~YrC~~C~f~lH~~Ca~~~~~ 178 (302)
.....|+.|++... ....|+|.+|++.+|.+|....+.
T Consensus 111 --~~~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~ 150 (674)
T 3pfq_A 111 --SSPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNVPS 150 (674)
T ss_dssp --SSCCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTSSSCC
T ss_pred --CCCCCCCccccccchhhcCccccccCCcchhhhhhhccCc
Confidence 23358999988632 225899999999999999987665
No 7
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.57 E-value=2.3e-05 Score=56.71 Aligned_cols=46 Identities=26% Similarity=0.568 Sum_probs=35.8
Q ss_pred ccCccCCC-CCCCCcEeecCC-CCCCccccCCCCce-ecCCCCCCCccccc
Q 035521 31 TSCSACKL-QPSGLMYTCKPC-NFTLHVSCTQMPQL-ITHPSHPAHSLSLV 78 (302)
Q Consensus 31 ~~Cd~C~~-~~~g~~Y~C~~C-~f~lH~~Ca~~P~~-i~Hp~Hp~H~L~L~ 78 (302)
..||+|+. +|.|.+|+|.+| ||||+..|.....+ ..|. +.|++...
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~g~~~~~H~--~~H~~~~~ 60 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHS--NQHQMKEY 60 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHHCCCCSSSC--TTCCEEEE
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHHHhCCCcCCCCC--CCCCEEEE
Confidence 67999997 599999999999 99999999975432 2332 45777654
No 8
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.51 E-value=3.7e-05 Score=55.64 Aligned_cols=44 Identities=30% Similarity=0.619 Sum_probs=34.6
Q ss_pred eecccCCCC-CCCeeEEcCCC-CccccccccCCCcceecccc--cccceE
Q 035521 88 FNCDGCGRQ-GHGFSYHCTHC-DFDLHILCATKPLTLIHQSH--PHQLQL 133 (302)
Q Consensus 88 ~~C~~C~~~-i~G~~Y~C~~C-dfdlH~~Ca~lP~~i~h~~H--~H~L~L 133 (302)
..||+|.+. |.|.+|+|.+| |||||..|.....+.. .| .|+++.
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~g~~~~--~H~~~H~~~~ 59 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGG--SHSNQHQMKE 59 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHHCCCCS--SSCTTCCEEE
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHHHhCCCcCC--CCCCCCCEEE
Confidence 689999974 99999999999 8999999988654322 23 377654
No 9
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=97.49 E-value=9.1e-05 Score=56.34 Aligned_cols=49 Identities=31% Similarity=0.668 Sum_probs=37.8
Q ss_pred ceecccCCC-CCCCeeEEcCCC-C---ccccccccCCCcceecccc--cccceEeecC
Q 035521 87 IFNCDGCGR-QGHGFSYHCTHC-D---FDLHILCATKPLTLIHQSH--PHQLQLTFDP 137 (302)
Q Consensus 87 ~~~C~~C~~-~i~G~~Y~C~~C-d---fdlH~~Ca~lP~~i~h~~H--~H~L~L~~~~ 137 (302)
.+.||.|.+ +|.|.+|+|.+| | ||||..|....... ..| .|+++.+..+
T Consensus 21 ~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~~~--~~H~~~H~~~~i~~~ 76 (82)
T 2fc7_A 21 GFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHET--DIHKEDHQLEPIYRS 76 (82)
T ss_dssp SCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCCCC--SSCCSSSCEEEECSC
T ss_pred cCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCcccc--CCCCCCCCEEEeeCC
Confidence 678999996 789999999999 7 99999999864321 234 2888766543
No 10
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=97.34 E-value=4.4e-05 Score=53.19 Aligned_cols=41 Identities=34% Similarity=0.812 Sum_probs=33.9
Q ss_pred ceecccCCCCCCCeeEEcCCC-CccccccccCCCcceecccccccceEe
Q 035521 87 IFNCDGCGRQGHGFSYHCTHC-DFDLHILCATKPLTLIHQSHPHQLQLT 134 (302)
Q Consensus 87 ~~~C~~C~~~i~G~~Y~C~~C-dfdlH~~Ca~lP~~i~h~~H~H~L~L~ 134 (302)
.+.|+.|.+.+ +.+|+|.+| ||||+..|.... .|.|++...
T Consensus 6 ~~~Cd~C~~~i-g~R~~C~~C~dyDLC~~C~~~~------~H~H~m~~~ 47 (52)
T 1tot_A 6 VYTCNECKHHV-ETRWHCTVCEDYDLCINCYNTK------SHTHKMVKW 47 (52)
T ss_dssp CEEETTTTEEE-SSEEEESSSSSCEECHHHHHHH------CCCSSEEEE
T ss_pred EEECCCCCCCC-cceEEcCCCCCchhHHHHHhCC------CCCCceEEe
Confidence 57999999886 899999999 899999998753 256787554
No 11
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=97.29 E-value=9.1e-05 Score=58.19 Aligned_cols=44 Identities=25% Similarity=0.581 Sum_probs=35.3
Q ss_pred ceecccCCC-CCCCeeEEcCCC-CccccccccCCCcceecccccccceEee
Q 035521 87 IFNCDGCGR-QGHGFSYHCTHC-DFDLHILCATKPLTLIHQSHPHQLQLTF 135 (302)
Q Consensus 87 ~~~C~~C~~-~i~G~~Y~C~~C-dfdlH~~Ca~lP~~i~h~~H~H~L~L~~ 135 (302)
...|+.|.. +|.|.+|+|.+| |||||..|..... |+ .|++....
T Consensus 31 gv~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~~---H~--~H~f~~i~ 76 (98)
T 2dip_A 31 GIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSYC---HL--SHTFTFRE 76 (98)
T ss_dssp CCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTTS---GG--GSCEEECC
T ss_pred CCCCcCCCCCCcccCeEECCCCCCccHHHHHHccCC---CC--CCCeeEec
Confidence 589999996 799999999999 8999999987652 42 37765543
No 12
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=97.20 E-value=5.2e-05 Score=52.78 Aligned_cols=42 Identities=21% Similarity=0.610 Sum_probs=34.0
Q ss_pred CccCccCCCCCCCCcEeecCC-CCCCccccCCCCceecCCCCCCCcccccc
Q 035521 30 TTSCSACKLQPSGLMYTCKPC-NFTLHVSCTQMPQLITHPSHPAHSLSLVP 79 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~C-~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~ 79 (302)
.+.||+|.+.+ +.+|+|.+| ||+|+..|... -. | .|++..+.
T Consensus 6 ~~~Cd~C~~~i-g~R~~C~~C~dyDLC~~C~~~---~~---H-~H~m~~~~ 48 (52)
T 1tot_A 6 VYTCNECKHHV-ETRWHCTVCEDYDLCINCYNT---KS---H-THKMVKWG 48 (52)
T ss_dssp CEEETTTTEEE-SSEEEESSSSSCEECHHHHHH---HC---C-CSSEEEEC
T ss_pred EEECCCCCCCC-cceEEcCCCCCchhHHHHHhC---CC---C-CCceEEec
Confidence 57899999985 899999999 99999999963 22 3 47777554
No 13
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.76 E-value=0.00057 Score=50.63 Aligned_cols=52 Identities=17% Similarity=0.303 Sum_probs=42.4
Q ss_pred CCCeecCCCCCCCeeecCCCCCCCccCccCCCCCCC---CcEeecCCCCCCccccCCC
Q 035521 7 DPHIQHFSHLHLLELSNPQTLNTTTSCSACKLQPSG---LMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 7 ~~~i~H~sH~HpL~l~~~~~~~~~~~Cd~C~~~~~g---~~Y~C~~C~f~lH~~Ca~~ 61 (302)
++...+....|.+....... ...|+.|.+.++| ..|+|+.|+|.+|+.|...
T Consensus 8 ~~~k~~~~~~H~F~~~~f~~---pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 8 EPPKLVNDKPHKFKDHFFKK---PKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSY 62 (74)
T ss_dssp CCCCCSCSSBCCEEEEECSS---CEECSSSCCEECHHHHEEEEESSSCCEECTTTTGG
T ss_pred cccccccCCCCceEEeeCCC---CcCchhcChhhccccCCccccCCCCCccChhHHhh
Confidence 44445666679999987653 7899999998887 6799999999999999973
No 14
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=96.45 E-value=0.0018 Score=43.88 Aligned_cols=42 Identities=24% Similarity=0.519 Sum_probs=33.0
Q ss_pred CCCeeecCCCCCCCccCccCCCCCCC---CcEeecCCCCCCccccCCC
Q 035521 17 HLLELSNPQTLNTTTSCSACKLQPSG---LMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 17 HpL~l~~~~~~~~~~~Cd~C~~~~~g---~~Y~C~~C~f~lH~~Ca~~ 61 (302)
|.+...... ....|+.|++.++| ..|+|+.|++..|+.|...
T Consensus 1 H~F~~~~~~---~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 1 HRFKVYNYM---SPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp CCEEEECCS---SCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCCEeecCC---CCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhh
Confidence 444444443 36789999998886 6799999999999999874
No 15
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=96.38 E-value=0.0038 Score=44.80 Aligned_cols=44 Identities=23% Similarity=0.480 Sum_probs=36.5
Q ss_pred CCCCCeeecCCCCCCCccCccCCCCCCC---CcEeecCCCCCCccccCCC
Q 035521 15 HLHLLELSNPQTLNTTTSCSACKLQPSG---LMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 15 H~HpL~l~~~~~~~~~~~Cd~C~~~~~g---~~Y~C~~C~f~lH~~Ca~~ 61 (302)
.+|.+...... ....|+.|...++| ..|+|..|++..|+.|...
T Consensus 11 ~~H~F~~~~~~---~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 11 MPHRFKVYNYK---SPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CCCCEEECCCC---SCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred CCCccEeEcCC---CCcCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 35888776654 26789999998886 6799999999999999974
No 16
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.29 E-value=0.0029 Score=47.74 Aligned_cols=49 Identities=29% Similarity=0.470 Sum_probs=39.8
Q ss_pred eecCCCCCCCeeecCCCCCCCccCccCCCCCCC---CcEeecCCCCCCccccCCC
Q 035521 10 IQHFSHLHLLELSNPQTLNTTTSCSACKLQPSG---LMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 10 i~H~sH~HpL~l~~~~~~~~~~~Cd~C~~~~~g---~~Y~C~~C~f~lH~~Ca~~ 61 (302)
..|....|.+...... ....|+.|...++| ..|+|..|+|.+|+.|...
T Consensus 11 k~~~~~~H~F~~~~~~---~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 11 KIHYIKNHEFIATFFG---QPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp CEECGGGCCEEEECCS---SCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred hCcccCCCceEeEeCC---CCcChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 3455556888887664 27789999998886 5799999999999999974
No 17
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=96.28 E-value=0.0034 Score=42.83 Aligned_cols=42 Identities=17% Similarity=0.433 Sum_probs=34.9
Q ss_pred CCCCeeecCCCCCCCccCccCCCCCCCCcEeecCCCCCCccccCCC
Q 035521 16 LHLLELSNPQTLNTTTSCSACKLQPSGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 16 ~HpL~l~~~~~~~~~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
.|.+...... ....|+.|++.++ ..|+|+.|++..|+.|...
T Consensus 3 ~H~F~~~~~~---~pt~C~~C~~~l~-qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 3 THNFARKTFL---KLAFCDICQKFLL-NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp CCCCEEECCS---SCEECTTSSSEEC-SEEECTTTTCCBCSTTSSS
T ss_pred CceeEeEeCC---CCcCCCCcccccc-cCCEeCCCCCeEChhHHhh
Confidence 4777666554 2789999999888 7999999999999999974
No 18
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.27 E-value=0.0059 Score=46.25 Aligned_cols=47 Identities=19% Similarity=0.414 Sum_probs=38.6
Q ss_pred cCCCCCCCeeecCCCCCCCccCccCCCCCCC---CcEeecCCCCCCccccCCC
Q 035521 12 HFSHLHLLELSNPQTLNTTTSCSACKLQPSG---LMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 12 H~sH~HpL~l~~~~~~~~~~~Cd~C~~~~~g---~~Y~C~~C~f~lH~~Ca~~ 61 (302)
.+.-+|.+....... ...|+.|...++| ..|+|..|+|.+|+.|...
T Consensus 13 ~~~~~H~F~~~~~~~---pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 13 DPRSKHKFKIHTYGS---PTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp CTTTSCCCEEECCSS---CCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred CCCCCcccEeeeCCC---CcCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 334468888876642 7889999998887 6799999999999999984
No 19
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=96.22 E-value=0.0033 Score=43.06 Aligned_cols=41 Identities=22% Similarity=0.477 Sum_probs=32.9
Q ss_pred CCCCeeecCCCCCCCccCccCCCCCCCCcEeecCCCCCCccccCCC
Q 035521 16 LHLLELSNPQTLNTTTSCSACKLQPSGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 16 ~HpL~l~~~~~~~~~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
+|.++..+.. ...|+.|++.++ ..|+|.+|+|..|.+|+..
T Consensus 4 ~HrF~~~t~~----~t~C~~C~k~i~-~G~kC~~Ck~~cH~kC~~~ 44 (49)
T 1kbe_A 4 THRFSTKSWL----SQVCNVCQKSMI-FGVKCKHCRLKCHNKCTKE 44 (49)
T ss_dssp CCCEEEECCS----SCCCSSSCCSSC-CEEEETTTTEEESSSCTTT
T ss_pred CcccCccCCC----CcCccccCceeE-CcCCCCCCCCccchhhcCc
Confidence 4666666542 367999999987 4699999999999999974
No 20
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=96.17 E-value=0.0017 Score=46.66 Aligned_cols=44 Identities=23% Similarity=0.469 Sum_probs=36.1
Q ss_pred CCCCCeeecCCCCCCCccCccCCCCCCC---CcEeecCCCCCCccccCCC
Q 035521 15 HLHLLELSNPQTLNTTTSCSACKLQPSG---LMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 15 H~HpL~l~~~~~~~~~~~Cd~C~~~~~g---~~Y~C~~C~f~lH~~Ca~~ 61 (302)
.+|.+...... ....|+.|++.++| ..|+|..|+|..|+.|...
T Consensus 8 ~~H~F~~~~~~---~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 54 (65)
T 3uej_A 8 GSHRFKVYNYM---SPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 54 (65)
T ss_dssp EECCEEEECCS---SCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCceEEeEeCC---CCCcccccChhhhccCceeeECCCCCCeEchhHhhh
Confidence 35888776654 26789999998876 5799999999999999974
No 21
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=96.12 E-value=0.0042 Score=42.51 Aligned_cols=41 Identities=24% Similarity=0.526 Sum_probs=32.2
Q ss_pred CccccccCCCCCCCceecccCCCCCCCeeEEcCCCCccccccccCCC
Q 035521 73 HSLSLVPTPIYPAGIFNCDGCGRQGHGFSYHCTHCDFDLHILCATKP 119 (302)
Q Consensus 73 H~L~L~~~~~~~~~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~lP 119 (302)
|.|+..+.. ...|+.|++.+. +.|+|.+|+|..|.+|+...
T Consensus 5 HrF~~~t~~-----~t~C~~C~k~i~-~G~kC~~Ck~~cH~kC~~~v 45 (49)
T 1kbe_A 5 HRFSTKSWL-----SQVCNVCQKSMI-FGVKCKHCRLKCHNKCTKEA 45 (49)
T ss_dssp CCEEEECCS-----SCCCSSSCCSSC-CEEEETTTTEEESSSCTTTS
T ss_pred cccCccCCC-----CcCccccCceeE-CcCCCCCCCCccchhhcCcC
Confidence 666654321 368999999986 56999999999999999853
No 22
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=96.12 E-value=0.0052 Score=44.11 Aligned_cols=43 Identities=26% Similarity=0.571 Sum_probs=34.7
Q ss_pred CCccccccCCCCCCCceecccCCCCCCC---eeEEcCCCCccccccccCC
Q 035521 72 AHSLSLVPTPIYPAGIFNCDGCGRQGHG---FSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 72 ~H~L~L~~~~~~~~~~~~C~~C~~~i~G---~~Y~C~~CdfdlH~~Ca~l 118 (302)
.|.|..... .....|+.|++.++| ..|+|+.|++.+|.+|+..
T Consensus 12 ~H~F~~~~~----~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 12 PHRFKVYNY----KSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CCCEEECCC----CSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred CCccEeEcC----CCCcCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 477776543 246899999998876 4699999999999999875
No 23
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=96.07 E-value=0.0029 Score=47.13 Aligned_cols=48 Identities=27% Similarity=0.490 Sum_probs=39.2
Q ss_pred ecCCCCCCCeeecCCCCCCCccCccCCCCCCC---CcEeecCCCCCCccccCCC
Q 035521 11 QHFSHLHLLELSNPQTLNTTTSCSACKLQPSG---LMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 11 ~H~sH~HpL~l~~~~~~~~~~~Cd~C~~~~~g---~~Y~C~~C~f~lH~~Ca~~ 61 (302)
.|....|.+...... ....|+.|...++| ..|.|..|+|.+|+.|...
T Consensus 18 ~~~~~~H~F~~~~f~---~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 18 VHHVKCHEFTATFFP---QPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp CEESSSCEEEEECCS---SCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred cccCCCCccEEEcCC---CCcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 355556888887654 37899999998876 6799999999999999974
No 24
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=96.01 E-value=0.0034 Score=42.43 Aligned_cols=33 Identities=30% Similarity=0.688 Sum_probs=29.0
Q ss_pred CceecccCCCCCCC---eeEEcCCCCccccccccCC
Q 035521 86 GIFNCDGCGRQGHG---FSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 86 ~~~~C~~C~~~i~G---~~Y~C~~CdfdlH~~Ca~l 118 (302)
....|+.|++.++| ..|+|++|++.+|.+|+..
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhh
Confidence 36789999998876 5799999999999999875
No 25
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=95.97 E-value=0.0035 Score=45.23 Aligned_cols=42 Identities=26% Similarity=0.474 Sum_probs=35.4
Q ss_pred CCCCeeecCCCCCCCccCccCCCCCCC---CcEeecCCCCCCccccCC
Q 035521 16 LHLLELSNPQTLNTTTSCSACKLQPSG---LMYTCKPCNFTLHVSCTQ 60 (302)
Q Consensus 16 ~HpL~l~~~~~~~~~~~Cd~C~~~~~g---~~Y~C~~C~f~lH~~Ca~ 60 (302)
+|.+...... ....|+.|...++| ..|+|..|+|..|+.|.+
T Consensus 13 ~H~F~~~~~~---~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 57 (66)
T 1y8f_A 13 QHNFEVWTAT---TPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQD 57 (66)
T ss_dssp CCCEEEEECS---SCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHH
T ss_pred CcccEeeeCC---CCcChhhcChhhcccCcceeEcCCCCCeeCHHHHh
Confidence 5888776654 26789999999887 569999999999999986
No 26
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=95.95 E-value=0.0066 Score=41.35 Aligned_cols=42 Identities=24% Similarity=0.547 Sum_probs=33.9
Q ss_pred CCccccccCCCCCCCceecccCCCCCCCeeEEcCCCCccccccccCC
Q 035521 72 AHSLSLVPTPIYPAGIFNCDGCGRQGHGFSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 72 ~H~L~L~~~~~~~~~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~l 118 (302)
.|.|...+. .....|+.|++.++ ..|+|+.|++..|.+|...
T Consensus 3 ~H~F~~~~~----~~pt~C~~C~~~l~-qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 3 THNFARKTF----LKLAFCDICQKFLL-NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp CCCCEEECC----SSCEECTTSSSEEC-SEEECTTTTCCBCSTTSSS
T ss_pred CceeEeEeC----CCCcCCCCcccccc-cCCEeCCCCCeEChhHHhh
Confidence 466665433 24789999999887 7899999999999999875
No 27
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.87 E-value=0.0048 Score=45.54 Aligned_cols=44 Identities=23% Similarity=0.384 Sum_probs=36.1
Q ss_pred CCCccccccCCCCCCCceecccCCCCCCC---eeEEcCCCCccccccccCC
Q 035521 71 PAHSLSLVPTPIYPAGIFNCDGCGRQGHG---FSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 71 p~H~L~L~~~~~~~~~~~~C~~C~~~i~G---~~Y~C~~CdfdlH~~Ca~l 118 (302)
..|.|...... ....|+.|++.++| ..|+|+.|++.+|.+|+.+
T Consensus 16 ~~H~F~~~~f~----~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 16 KPHKFKDHFFK----KPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSY 62 (74)
T ss_dssp SBCCEEEEECS----SCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGG
T ss_pred CCCceEEeeCC----CCcCchhcChhhccccCCccccCCCCCccChhHHhh
Confidence 35878776432 47899999999887 5799999999999999874
No 28
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.61 E-value=0.01 Score=44.98 Aligned_cols=43 Identities=26% Similarity=0.575 Sum_probs=35.2
Q ss_pred CCccccccCCCCCCCceecccCCCCCCC---eeEEcCCCCccccccccCC
Q 035521 72 AHSLSLVPTPIYPAGIFNCDGCGRQGHG---FSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 72 ~H~L~L~~~~~~~~~~~~C~~C~~~i~G---~~Y~C~~CdfdlH~~Ca~l 118 (302)
.|.|...... ....|+.|.+.++| ..|+|..|++.+|.+|+..
T Consensus 17 ~H~F~~~~~~----~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 17 KHKFKIHTYG----SPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp SCCCEEECCS----SCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred CcccEeeeCC----CCcCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 4777765432 46899999998877 5799999999999999885
No 29
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=95.58 E-value=0.0067 Score=42.86 Aligned_cols=44 Identities=20% Similarity=0.389 Sum_probs=35.9
Q ss_pred CCCCCee-ecCCCCCCCccCccCCCCCCCCcEeecCCCCCCccccCCC
Q 035521 15 HLHLLEL-SNPQTLNTTTSCSACKLQPSGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 15 H~HpL~l-~~~~~~~~~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
.+|.+.. .... ....|+.|+..+....|+|..|+|..|+.|.+.
T Consensus 9 ~~H~F~~~~~~~---~pt~C~~C~~~i~kqg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 9 EGHRFVELALRG---GPGWCDLCGREVLRQALRCANCKFTCHSECRSL 53 (59)
T ss_dssp SSCCCEECCCSS---CCEECTTTCSEECSCCEECTTTSCEECHHHHTT
T ss_pred CCCcCeeeeccC---CCeEchhcchhhhhCccEeCCCCCeEehhhhhh
Confidence 3587777 5543 377899999987777899999999999999974
No 30
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=95.51 E-value=0.0067 Score=43.46 Aligned_cols=43 Identities=26% Similarity=0.563 Sum_probs=34.0
Q ss_pred CCccccccCCCCCCCceecccCCCCCCC---eeEEcCCCCccccccccCC
Q 035521 72 AHSLSLVPTPIYPAGIFNCDGCGRQGHG---FSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 72 ~H~L~L~~~~~~~~~~~~C~~C~~~i~G---~~Y~C~~CdfdlH~~Ca~l 118 (302)
.|.|...... ....|+.|++.++| ..|+|..|++..|.+|+..
T Consensus 9 ~H~F~~~~~~----~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 54 (65)
T 3uej_A 9 SHRFKVYNYM----SPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 54 (65)
T ss_dssp ECCEEEECCS----SCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CceEEeEeCC----CCCcccccChhhhccCceeeECCCCCCeEchhHhhh
Confidence 3667654332 36789999998876 4799999999999999875
No 31
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=95.47 E-value=0.0085 Score=43.13 Aligned_cols=43 Identities=21% Similarity=0.410 Sum_probs=34.5
Q ss_pred CCccccccCCCCCCCceecccCCCCCCC---eeEEcCCCCccccccccCC
Q 035521 72 AHSLSLVPTPIYPAGIFNCDGCGRQGHG---FSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 72 ~H~L~L~~~~~~~~~~~~C~~C~~~i~G---~~Y~C~~CdfdlH~~Ca~l 118 (302)
.|.|...... ....|+.|.+.++| ..|+|++|++.+|.+|+.+
T Consensus 13 ~H~F~~~~~~----~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 58 (66)
T 1y8f_A 13 QHNFEVWTAT----TPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDL 58 (66)
T ss_dssp CCCEEEEECS----SCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHH
T ss_pred CcccEeeeCC----CCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhh
Confidence 4777765432 46789999999887 5699999999999999874
No 32
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=95.46 E-value=0.009 Score=44.39 Aligned_cols=43 Identities=23% Similarity=0.485 Sum_probs=35.2
Q ss_pred CCccccccCCCCCCCceecccCCCCCCC---eeEEcCCCCccccccccCC
Q 035521 72 AHSLSLVPTPIYPAGIFNCDGCGRQGHG---FSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 72 ~H~L~L~~~~~~~~~~~~C~~C~~~i~G---~~Y~C~~CdfdlH~~Ca~l 118 (302)
.|.|..... .....|+.|.+.++| ..|+|..|++.+|.+|...
T Consensus 23 ~H~F~~~~f----~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 23 CHEFTATFF----PQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp SCEEEEECC----SSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CCccEEEcC----CCCcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 577776543 247899999998876 5799999999999999875
No 33
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.37 E-value=0.011 Score=44.37 Aligned_cols=43 Identities=23% Similarity=0.447 Sum_probs=34.9
Q ss_pred CCccccccCCCCCCCceecccCCCCCCC---eeEEcCCCCccccccccCC
Q 035521 72 AHSLSLVPTPIYPAGIFNCDGCGRQGHG---FSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 72 ~H~L~L~~~~~~~~~~~~C~~C~~~i~G---~~Y~C~~CdfdlH~~Ca~l 118 (302)
.|.|..... .....|+.|++.++| ..|+|..|.+.+|.+|...
T Consensus 17 ~H~F~~~~~----~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 17 NHEFIATFF----GQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp GCCEEEECC----SSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred CCceEeEeC----CCCcChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 477776543 246899999999886 4799999999999999885
No 34
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=95.32 E-value=0.013 Score=43.09 Aligned_cols=44 Identities=20% Similarity=0.389 Sum_probs=35.9
Q ss_pred CCCCCee-ecCCCCCCCccCccCCCCCCCCcEeecCCCCCCccccCCC
Q 035521 15 HLHLLEL-SNPQTLNTTTSCSACKLQPSGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 15 H~HpL~l-~~~~~~~~~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
.+|.+.. .... ....|+.|+..+....|+|..|+|..|+.|...
T Consensus 22 ~~H~F~~~~~~~---~pt~C~~C~~~l~~qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 22 EGHRFVELALRG---GPGWCDLCGREVLRQALRCANCKFTCHSECRSL 66 (72)
T ss_dssp SSCCCEECCCCS---SCCBCTTTSSBCSSCCEECTTSSCEECTGGGGG
T ss_pred CCCccceeecCC---CCcchhhhhHHHHhCcCccCCCCCeechhhhcc
Confidence 4588877 5443 267899999988778899999999999999973
No 35
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=95.06 E-value=0.0075 Score=45.90 Aligned_cols=42 Identities=19% Similarity=0.319 Sum_probs=35.4
Q ss_pred CCCCeeecCCCCCCCccCccCCCCCCCC-----cEeecCCCCCCccccCC
Q 035521 16 LHLLELSNPQTLNTTTSCSACKLQPSGL-----MYTCKPCNFTLHVSCTQ 60 (302)
Q Consensus 16 ~HpL~l~~~~~~~~~~~Cd~C~~~~~g~-----~Y~C~~C~f~lH~~Ca~ 60 (302)
.|.+....... ...|+.|+..+||. .|.|..|.|.+|+.|..
T Consensus 24 ~H~F~~~~~~~---PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~ 70 (84)
T 2row_A 24 GHEFIPTLYHF---PTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMD 70 (84)
T ss_dssp TEEEEEECCSS---CEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHH
T ss_pred CcceEeEcCCC---CcchhhcCHhhhccccCCCCCEecCCCCccchhHhC
Confidence 47777776543 78999999998873 89999999999999997
No 36
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=94.89 E-value=0.02 Score=42.10 Aligned_cols=43 Identities=28% Similarity=0.539 Sum_probs=34.0
Q ss_pred CCcccc-ccCCCCCCCceecccCCCCCCCeeEEcCCCCccccccccCC
Q 035521 72 AHSLSL-VPTPIYPAGIFNCDGCGRQGHGFSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 72 ~H~L~L-~~~~~~~~~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~l 118 (302)
.|.|.. ... .....|+.|++.+....|+|.+|+|..|.+|..+
T Consensus 23 ~H~F~~~~~~----~~pt~C~~C~~~l~~qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 23 GHRFVELALR----GGPGWCDLCGREVLRQALRCANCKFTCHSECRSL 66 (72)
T ss_dssp SCCCEECCCC----SSCCBCTTTSSBCSSCCEECTTSSCEECTGGGGG
T ss_pred CCccceeecC----CCCcchhhhhHHHHhCcCccCCCCCeechhhhcc
Confidence 476765 322 2467899999988667899999999999999875
No 37
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=94.87 E-value=0.016 Score=40.84 Aligned_cols=43 Identities=28% Similarity=0.539 Sum_probs=34.0
Q ss_pred CCcccc-ccCCCCCCCceecccCCCCCCCeeEEcCCCCccccccccCC
Q 035521 72 AHSLSL-VPTPIYPAGIFNCDGCGRQGHGFSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 72 ~H~L~L-~~~~~~~~~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~l 118 (302)
.|.|.. ... .....|+.|++.+....|+|.+|++..|.+|..+
T Consensus 10 ~H~F~~~~~~----~~pt~C~~C~~~i~kqg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 10 GHRFVELALR----GGPGWCDLCGREVLRQALRCANCKFTCHSECRSL 53 (59)
T ss_dssp SCCCEECCCS----SCCEECTTTCSEECSCCEECTTTSCEECHHHHTT
T ss_pred CCcCeeeecc----CCCeEchhcchhhhhCccEeCCCCCeEehhhhhh
Confidence 476765 322 2478999999988667899999999999999875
No 38
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=93.80 E-value=0.04 Score=39.23 Aligned_cols=43 Identities=23% Similarity=0.478 Sum_probs=32.7
Q ss_pred CCccccccCCCCCCCceecccCCCCC-CC-eeEEcCCCCccccccccCC
Q 035521 72 AHSLSLVPTPIYPAGIFNCDGCGRQG-HG-FSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 72 ~H~L~L~~~~~~~~~~~~C~~C~~~i-~G-~~Y~C~~CdfdlH~~Ca~l 118 (302)
.|.|.-.+.. ....|+.|++.+ .| ..|+|.+|.+..|..|...
T Consensus 8 ~H~F~~kt~~----~~~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~~ 52 (61)
T 4b6d_A 8 LHDFVSKTVI----KPESCVPCGKRIKFGKLSLKCRDCRVVSHPECRDR 52 (61)
T ss_dssp CCCEEEEECC----SCEECTTTCCEECTTCEEEEESSSSCEECGGGGGG
T ss_pred ceeEEeeecc----CCcccccccCEEEEeeEeeECCCCCCeEchhHhhc
Confidence 4666654332 368999999876 23 5799999999999999764
No 39
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=93.59 E-value=0.06 Score=38.29 Aligned_cols=36 Identities=22% Similarity=0.378 Sum_probs=28.9
Q ss_pred cccccccccccc-cceeEEcCCCCccccccCccccCC
Q 035521 143 GFSCDICKKVGS-AHWLYRCSLCEFDAHLDCAANLLA 178 (302)
Q Consensus 143 ~~~C~vC~k~~~-~~~~YrC~~C~f~lH~~Ca~~~~~ 178 (302)
...|++|++... ..+.|+|.+|.+..|.+|....+.
T Consensus 19 ~~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~~~~~ 55 (61)
T 4b6d_A 19 PESCVPCGKRIKFGKLSLKCRDCRVVSHPECRDRCPL 55 (61)
T ss_dssp CEECTTTCCEECTTCEEEEESSSSCEECGGGGGGSCS
T ss_pred CcccccccCEEEEeeEeeECCCCCCeEchhHhhcCCC
Confidence 358999987642 236899999999999999877554
No 40
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=93.46 E-value=0.022 Score=43.25 Aligned_cols=44 Identities=18% Similarity=0.321 Sum_probs=35.0
Q ss_pred CCCCccccccCCCCCCCceecccCCCCCCCe-----eEEcCCCCccccccccC
Q 035521 70 HPAHSLSLVPTPIYPAGIFNCDGCGRQGHGF-----SYHCTHCDFDLHILCAT 117 (302)
Q Consensus 70 Hp~H~L~L~~~~~~~~~~~~C~~C~~~i~G~-----~Y~C~~CdfdlH~~Ca~ 117 (302)
+..|.|..... .....|+.|++.++|. .|.|..|.+.+|.+|..
T Consensus 22 ~~~H~F~~~~~----~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~ 70 (84)
T 2row_A 22 HKGHEFIPTLY----HFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMD 70 (84)
T ss_dssp ETTEEEEEECC----SSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHH
T ss_pred cCCcceEeEcC----CCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhC
Confidence 34576765432 2478999999988874 89999999999999987
No 41
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=91.28 E-value=0.42 Score=37.32 Aligned_cols=80 Identities=25% Similarity=0.483 Sum_probs=53.5
Q ss_pred CceecccCCCCCC-CeeEEcCCCCccccccccCCCcceecccccccceEeecCCCc-cccccccccccccccceeEEcCC
Q 035521 86 GIFNCDGCGRQGH-GFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYY-TEGFSCDICKKVGSAHWLYRCSL 163 (302)
Q Consensus 86 ~~~~C~~C~~~i~-G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~-~~~~~C~vC~k~~~~~~~YrC~~ 163 (302)
+...|.+|+.... .....|..|.-.+|..|...+... + ....+. ..=..|.+|++.........|..
T Consensus 6 ~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~--------~---~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~ 74 (111)
T 2ysm_A 6 SGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTP--------L---KRAGWQCPECKVCQNCKQSGEDSKMLVCDT 74 (111)
T ss_dssp CCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCT--------T---TSTTCCCTTTCCCTTTCCCSCCTTEEECSS
T ss_pred CCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCcccc--------c---cccCccCCcCCcccccCccCCCCCeeECCC
Confidence 4678999988653 344899999999999999865311 0 000000 00124667776543345889999
Q ss_pred CCccccccCcccc
Q 035521 164 CEFDAHLDCAANL 176 (302)
Q Consensus 164 C~f~lH~~Ca~~~ 176 (302)
|+-.+|..|+.-+
T Consensus 75 C~~~yH~~Cl~pp 87 (111)
T 2ysm_A 75 CDKGYHTFCLQPV 87 (111)
T ss_dssp SCCEEEGGGSSSC
T ss_pred CCcHHhHHhcCCc
Confidence 9999999999753
No 42
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=89.64 E-value=0.38 Score=37.86 Aligned_cols=97 Identities=27% Similarity=0.561 Sum_probs=59.4
Q ss_pred CccCccCCCC------C-CCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCC-CCceecccCCCCC--CC
Q 035521 30 TTSCSACKLQ------P-SGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYP-AGIFNCDGCGRQG--HG 99 (302)
Q Consensus 30 ~~~Cd~C~~~------~-~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~-~~~~~C~~C~~~i--~G 99 (302)
...|..|... . .+....|..|.-.+|.+|+.+..++. ..+....+. ..=..|.+|++.. .+
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~---------~~~~~~~W~C~~C~~C~vC~~~~~~~~ 75 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELT---------VRVKALRWQCIECKTCSSCRDQGKNAD 75 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHH---------HHHHTSCCCCTTTCCBTTTCCCCCTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHH---------HHhhccccccccCCccccccCcCCCcc
Confidence 4568888653 1 24679999999999999998532110 001111010 0112577777543 24
Q ss_pred eeEEcCCCCccccccccCCCcceecccccccceEeecCCCcccccccccccc
Q 035521 100 FSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKK 151 (302)
Q Consensus 100 ~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k 151 (302)
....|..|+-.+|..|..-| | . +.| .+.|.|..|+.
T Consensus 76 ~ll~Cd~C~~~yH~~Cl~p~-----------l--~-~~P--~~~W~C~~C~~ 111 (112)
T 3v43_A 76 NMLFCDSCDRGFHMECCDPP-----------L--T-RMP--KGMWICQICRP 111 (112)
T ss_dssp CCEECTTTCCEECGGGCSSC-----------C--S-SCC--SSCCCCTTTSC
T ss_pred ceEEcCCCCCeeecccCCCC-----------C--C-CCC--CCCeECCCCCC
Confidence 67899999999999997633 1 1 111 34688988864
No 43
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=87.89 E-value=0.14 Score=38.72 Aligned_cols=37 Identities=27% Similarity=0.596 Sum_probs=29.0
Q ss_pred ccccccccccccc---cceeEEcCCCCccccccCccccCC
Q 035521 142 EGFSCDICKKVGS---AHWLYRCSLCEFDAHLDCAANLLA 178 (302)
Q Consensus 142 ~~~~C~vC~k~~~---~~~~YrC~~C~f~lH~~Ca~~~~~ 178 (302)
...+|.+|++.+. ....|||.+|...+|.+|......
T Consensus 37 ~~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~~~~ 76 (84)
T 1r79_A 37 VSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLT 76 (84)
T ss_dssp TTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHHCCS
T ss_pred CCCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHhccC
Confidence 3468999998642 235799999999999999977543
No 44
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=87.73 E-value=1.6 Score=33.94 Aligned_cols=78 Identities=19% Similarity=0.456 Sum_probs=51.7
Q ss_pred CccCccCCCCCC-CCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCC-CCceecccCCCCC-CCeeEEcCC
Q 035521 30 TTSCSACKLQPS-GLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYP-AGIFNCDGCGRQG-HGFSYHCTH 106 (302)
Q Consensus 30 ~~~Cd~C~~~~~-g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~-~~~~~C~~C~~~i-~G~~Y~C~~ 106 (302)
...|..|+.... ...-.|..|.-.+|..|...+... + ....+. ..=..|.+|++.. ......|..
T Consensus 7 ~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~---------~---~~~~W~C~~C~~C~~C~~~~~~~~ll~Cd~ 74 (111)
T 2ysm_A 7 GANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTP---------L---KRAGWQCPECKVCQNCKQSGEDSKMLVCDT 74 (111)
T ss_dssp CSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCT---------T---TSTTCCCTTTCCCTTTCCCSCCTTEEECSS
T ss_pred CCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCcccc---------c---cccCccCCcCCcccccCccCCCCCeeECCC
Confidence 568999988643 345899999999999999854310 1 011010 0012466676654 235799999
Q ss_pred CCccccccccCCC
Q 035521 107 CDFDLHILCATKP 119 (302)
Q Consensus 107 CdfdlH~~Ca~lP 119 (302)
|+-.+|..|...|
T Consensus 75 C~~~yH~~Cl~pp 87 (111)
T 2ysm_A 75 CDKGYHTFCLQPV 87 (111)
T ss_dssp SCCEEEGGGSSSC
T ss_pred CCcHHhHHhcCCc
Confidence 9999999998743
No 45
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=86.60 E-value=0.39 Score=47.98 Aligned_cols=43 Identities=30% Similarity=0.582 Sum_probs=35.8
Q ss_pred CCCCeeecCCCCCCCccCccCCCCCCC---CcEeecCCCCCCccccCCC
Q 035521 16 LHLLELSNPQTLNTTTSCSACKLQPSG---LMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 16 ~HpL~l~~~~~~~~~~~Cd~C~~~~~g---~~Y~C~~C~f~lH~~Ca~~ 61 (302)
.|.+.+..... ...|+.|+..++| .+|+|..|++.+|+.|...
T Consensus 518 ~H~F~~~~~~~---~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 518 GHDFQMFSFEE---TTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp GCCEEEECCSS---CCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred CCceeEEeCCC---CcccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 48888776542 7799999998766 5699999999999999984
No 46
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=86.45 E-value=0.53 Score=37.17 Aligned_cols=79 Identities=22% Similarity=0.354 Sum_probs=50.3
Q ss_pred ecccCCCCC--------CCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCc-cccccccccccccccceeE
Q 035521 89 NCDGCGRQG--------HGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYY-TEGFSCDICKKVGSAHWLY 159 (302)
Q Consensus 89 ~C~~C~~~i--------~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~-~~~~~C~vC~k~~~~~~~Y 159 (302)
.|+.|.... .+....|..|.-.+|..|...+..+.. .+....+. ..=..|.+|++........
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~--------~~~~~~W~C~~C~~C~~C~~~~~~~~ll 74 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTE--------AVKTYKWQCIECKSCILCGTSENDDQLL 74 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHH--------HHHHTTCCCGGGCCCTTTTCCTTTTTEE
T ss_pred cCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhh--------ccCCCccCccccCccCcccccCCCCceE
Confidence 588886432 236689999999999999986532210 00010000 0012577777654345678
Q ss_pred EcCCCCccccccCccc
Q 035521 160 RCSLCEFDAHLDCAAN 175 (302)
Q Consensus 160 rC~~C~f~lH~~Ca~~ 175 (302)
.|..|+-.+|..|+.-
T Consensus 75 ~Cd~C~~~yH~~Cl~p 90 (114)
T 2kwj_A 75 FCDDCDRGYHMYCLNP 90 (114)
T ss_dssp ECSSSCCEEETTTSSS
T ss_pred EcCCCCccccccccCC
Confidence 8999999999999974
No 47
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=85.85 E-value=0.76 Score=36.23 Aligned_cols=95 Identities=25% Similarity=0.578 Sum_probs=59.8
Q ss_pred cCccCCCCC--------CCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCC-CceecccCCCCC-CCee
Q 035521 32 SCSACKLQP--------SGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPA-GIFNCDGCGRQG-HGFS 101 (302)
Q Consensus 32 ~Cd~C~~~~--------~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~-~~~~C~~C~~~i-~G~~ 101 (302)
.|+.|.... .+..-.|..|.-.+|..|+..+.++. ..+....+.- .-..|.+|++.. .+..
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~---------~~~~~~~W~C~~C~~C~~C~~~~~~~~l 73 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMT---------EAVKTYKWQCIECKSCILCGTSENDDQL 73 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHH---------HHHHHTTCCCGGGCCCTTTTCCTTTTTE
T ss_pred cCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhh---------hccCCCccCccccCccCcccccCCCCce
Confidence 588886532 24679999999999999998653211 1111111100 012577777653 3578
Q ss_pred EEcCCCCccccccccCCCcceecccccccceEeecCCCcccccccccccc
Q 035521 102 YHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKK 151 (302)
Q Consensus 102 Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k 151 (302)
..|..|+-.+|..|...|. . ..| .+.|.|..|..
T Consensus 74 l~Cd~C~~~yH~~Cl~ppl-----------~---~~P--~g~W~C~~C~~ 107 (114)
T 2kwj_A 74 LFCDDCDRGYHMYCLNPPV-----------A---EPP--EGSWSCHLCWE 107 (114)
T ss_dssp EECSSSCCEEETTTSSSCC-----------S---SCC--SSCCCCHHHHH
T ss_pred EEcCCCCccccccccCCCc-----------c---CCC--CCCeECccccc
Confidence 9999999999999987431 1 111 34688998864
No 48
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=85.33 E-value=0.53 Score=44.50 Aligned_cols=41 Identities=32% Similarity=0.626 Sum_probs=33.8
Q ss_pred CCCeeecCCCCCCCccCccCCCCCCC---CcEeecCCCCCCccccCC
Q 035521 17 HLLELSNPQTLNTTTSCSACKLQPSG---LMYTCKPCNFTLHVSCTQ 60 (302)
Q Consensus 17 HpL~l~~~~~~~~~~~Cd~C~~~~~g---~~Y~C~~C~f~lH~~Ca~ 60 (302)
|.+...... ....|+.|+..++| .+|+|..|++.+|..|..
T Consensus 347 h~f~~~~~~---~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~ 390 (406)
T 2vrw_B 347 HDFQMFSFE---ETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLG 390 (406)
T ss_dssp CCEEEECCS---SCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGG
T ss_pred CCCccccCC---CCCCCccccchhceeCCCCCCCCCCcCccchhhhh
Confidence 666666543 26799999998765 679999999999999997
No 49
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=83.56 E-value=2.4 Score=33.24 Aligned_cols=66 Identities=21% Similarity=0.520 Sum_probs=46.4
Q ss_pred CCccCccCCCCCCCCcEeec--CCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecc-----cCCCCCCCee
Q 035521 29 TTTSCSACKLQPSGLMYTCK--PCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCD-----GCGRQGHGFS 101 (302)
Q Consensus 29 ~~~~Cd~C~~~~~g~~Y~C~--~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~-----~C~~~i~G~~ 101 (302)
....|..|+. .|....|. .|...+|..|..+.. + | .+.|+|. .|++. ..
T Consensus 14 ~~~~C~~C~~--~G~ll~CD~~~Cp~~fH~~Cl~L~~--------------~--P---~g~W~Cp~c~C~~C~k~---~~ 69 (107)
T 4gne_A 14 HEDYCFQCGD--GGELVMCDKKDCPKAYHLLCLNLTQ--------------P--P---YGKWECPWHQCDECSSA---AV 69 (107)
T ss_dssp SCSSCTTTCC--CSEEEECCSTTCCCEECTGGGTCSS--------------C--C---SSCCCCGGGBCTTTCSB---CC
T ss_pred CCCCCCcCCC--CCcEeEECCCCCCcccccccCcCCc--------------C--C---CCCEECCCCCCCcCCCC---CC
Confidence 3567999984 36778998 799999999986211 1 1 1345554 55543 34
Q ss_pred EEcCCCCccccccccCC
Q 035521 102 YHCTHCDFDLHILCATK 118 (302)
Q Consensus 102 Y~C~~CdfdlH~~Ca~l 118 (302)
|+|..|...+|..|...
T Consensus 70 ~~C~~Cp~sfC~~c~~g 86 (107)
T 4gne_A 70 SFCEFCPHSFCKDHEKG 86 (107)
T ss_dssp EECSSSSCEECTTTCTT
T ss_pred cCcCCCCcchhhhccCC
Confidence 99999999999888754
No 50
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=83.27 E-value=0.62 Score=46.48 Aligned_cols=43 Identities=21% Similarity=0.538 Sum_probs=35.0
Q ss_pred CCccccccCCCCCCCceecccCCCCCCC---eeEEcCCCCccccccccCC
Q 035521 72 AHSLSLVPTPIYPAGIFNCDGCGRQGHG---FSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 72 ~H~L~L~~~~~~~~~~~~C~~C~~~i~G---~~Y~C~~CdfdlH~~Ca~l 118 (302)
.|.|...+. .....|+.|+..++| ..|+|..|++.+|.+|...
T Consensus 518 ~H~F~~~~~----~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 518 GHDFQMFSF----EETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp GCCEEEECC----SSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred CCceeEEeC----CCCcccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 477776543 247899999998765 4699999999999999985
No 51
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=80.02 E-value=1.1 Score=42.41 Aligned_cols=43 Identities=21% Similarity=0.516 Sum_probs=33.7
Q ss_pred CCccccccCCCCCCCceecccCCCCCCC---eeEEcCCCCccccccccCC
Q 035521 72 AHSLSLVPTPIYPAGIFNCDGCGRQGHG---FSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 72 ~H~L~L~~~~~~~~~~~~C~~C~~~i~G---~~Y~C~~CdfdlH~~Ca~l 118 (302)
.|.+...+. .....|+.|+..++| ..|+|..|++.+|.+|...
T Consensus 346 ~h~f~~~~~----~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~ 391 (406)
T 2vrw_B 346 GHDFQMFSF----EETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGR 391 (406)
T ss_dssp GCCEEEECC----SSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGG
T ss_pred CCCCccccC----CCCCCCccccchhceeCCCCCCCCCCcCccchhhhhh
Confidence 366665432 246899999998765 4799999999999999874
No 52
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=77.73 E-value=1.2 Score=43.11 Aligned_cols=43 Identities=21% Similarity=0.496 Sum_probs=34.7
Q ss_pred CCCCeeecCCCCCCCccCccCCCCCCC---CcEeecCCCCCCccccCCC
Q 035521 16 LHLLELSNPQTLNTTTSCSACKLQPSG---LMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 16 ~HpL~l~~~~~~~~~~~Cd~C~~~~~g---~~Y~C~~C~f~lH~~Ca~~ 61 (302)
.|.+...... ....|+.|+..++| ..|+|..|.+..|+.|...
T Consensus 209 ~h~f~~~~~~---~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~ 254 (463)
T 3cxl_A 209 IHNFKVHTFR---GPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKM 254 (463)
T ss_dssp CCCEEEECCS---SCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTT
T ss_pred CcceEEeecC---CCCcchhhhhhhhhHHhcCeeccccCcccccccccc
Confidence 3777765543 37789999998876 4799999999999999864
No 53
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=74.59 E-value=2.4 Score=31.91 Aligned_cols=43 Identities=21% Similarity=0.431 Sum_probs=33.8
Q ss_pred CCCCCeeecCCCCCCCccCccCCCCCCC----CcEeecCCCCCCccccCC
Q 035521 15 HLHLLELSNPQTLNTTTSCSACKLQPSG----LMYTCKPCNFTLHVSCTQ 60 (302)
Q Consensus 15 H~HpL~l~~~~~~~~~~~Cd~C~~~~~g----~~Y~C~~C~f~lH~~Ca~ 60 (302)
+.|-+..-+... ..+|+.|++.+.. ..|+|.=|...+|.+|..
T Consensus 26 ~~H~WveGNl~~---~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~ 72 (84)
T 1r79_A 26 MPHQWLEGNLPV---SAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKE 72 (84)
T ss_dssp BCCCEEESCCCT---TCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHH
T ss_pred ceeeEEccCCCC---CCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHH
Confidence 357777766542 5799999997642 569999999999999985
No 54
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=73.06 E-value=9.3 Score=29.85 Aligned_cols=68 Identities=25% Similarity=0.500 Sum_probs=48.6
Q ss_pred CceecccCCCCCCCeeEEcC--CCCccccccccCCCcceecccccccceEeecCCCcccccc-----cccccccccccee
Q 035521 86 GIFNCDGCGRQGHGFSYHCT--HCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFS-----CDICKKVGSAHWL 158 (302)
Q Consensus 86 ~~~~C~~C~~~i~G~~Y~C~--~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~-----C~vC~k~~~~~~~ 158 (302)
....|.+|+.. |....|. .|...+|..|..+... | .+.|. |.+|++. ..
T Consensus 14 ~~~~C~~C~~~--G~ll~CD~~~Cp~~fH~~Cl~L~~~---------------P---~g~W~Cp~c~C~~C~k~----~~ 69 (107)
T 4gne_A 14 HEDYCFQCGDG--GELVMCDKKDCPKAYHLLCLNLTQP---------------P---YGKWECPWHQCDECSSA----AV 69 (107)
T ss_dssp SCSSCTTTCCC--SEEEECCSTTCCCEECTGGGTCSSC---------------C---SSCCCCGGGBCTTTCSB----CC
T ss_pred CCCCCCcCCCC--CcEeEECCCCCCcccccccCcCCcC---------------C---CCCEECCCCCCCcCCCC----CC
Confidence 46689999953 6788999 8999999999874211 1 12344 4556553 24
Q ss_pred EEcCCCCccccccCccccC
Q 035521 159 YRCSLCEFDAHLDCAANLL 177 (302)
Q Consensus 159 YrC~~C~f~lH~~Ca~~~~ 177 (302)
|+|..|...+|..|.....
T Consensus 70 ~~C~~Cp~sfC~~c~~g~l 88 (107)
T 4gne_A 70 SFCEFCPHSFCKDHEKGAL 88 (107)
T ss_dssp EECSSSSCEECTTTCTTSC
T ss_pred cCcCCCCcchhhhccCCcc
Confidence 8999999999999986643
No 55
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.04 E-value=1.6 Score=42.37 Aligned_cols=43 Identities=21% Similarity=0.560 Sum_probs=33.4
Q ss_pred CccccccCCCCCCCceecccCCCCCCCe---eEEcCCCCccccccccCCC
Q 035521 73 HSLSLVPTPIYPAGIFNCDGCGRQGHGF---SYHCTHCDFDLHILCATKP 119 (302)
Q Consensus 73 H~L~L~~~~~~~~~~~~C~~C~~~i~G~---~Y~C~~CdfdlH~~Ca~lP 119 (302)
|.|...... ....|+.|++.++|. .|+|..|++..|.+|....
T Consensus 210 h~f~~~~~~----~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~v 255 (463)
T 3cxl_A 210 HNFKVHTFR----GPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMV 255 (463)
T ss_dssp CCEEEECCS----SCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTTS
T ss_pred cceEEeecC----CCCcchhhhhhhhhHHhcCeeccccCccccccccccc
Confidence 666654332 468999999988763 7999999999999998653
No 56
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=71.53 E-value=3.3 Score=28.84 Aligned_cols=49 Identities=22% Similarity=0.665 Sum_probs=36.6
Q ss_pred CCccCccCCCCCCCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCCC
Q 035521 29 TTTSCSACKLQPSGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGRQ 96 (302)
Q Consensus 29 ~~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~~ 96 (302)
....|..|+.. +..-.|..|+-.+|..|...|. +. .+ .+.|+|..|.+.
T Consensus 10 ~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~p~l------------~~--~p---~g~W~C~~C~~~ 58 (61)
T 2l5u_A 10 HQDYCEVCQQG--GEIILCDTCPRAYHMVCLDPDM------------EK--AP---EGKWSCPHCEKE 58 (61)
T ss_dssp CCSSCTTTSCC--SSEEECSSSSCEEEHHHHCTTC------------CS--CC---CSSCCCTTGGGG
T ss_pred CCCCCccCCCC--CcEEECCCCChhhhhhccCCCC------------CC--CC---CCceECcccccc
Confidence 36789999974 6789999999999999997432 11 11 357999999754
No 57
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=71.35 E-value=3.3 Score=29.50 Aligned_cols=48 Identities=19% Similarity=0.459 Sum_probs=35.1
Q ss_pred CccCccCCCCCCCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCCC
Q 035521 30 TTSCSACKLQPSGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGRQ 96 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~~ 96 (302)
...|..|+.. +....|..|+-.+|..|...| |.-+ | .+.|+|..|...
T Consensus 12 ~~~C~vC~~~--~~ll~Cd~C~~~~H~~Cl~P~------------l~~~--P---~g~W~C~~C~~~ 59 (66)
T 2lri_C 12 GARCGVCGDG--TDVLRCTHCAAAFHWRCHFPA------------GTSR--P---GTGLRCRSCSGD 59 (66)
T ss_dssp TCCCTTTSCC--TTCEECSSSCCEECHHHHCTT------------TCCC--C---SSSCCCTTTTTC
T ss_pred CCCcCCCCCC--CeEEECCCCCCceecccCCCc------------cCcC--C---CCCEECccccCC
Confidence 4679999864 557899999999999999632 2211 1 347899999753
No 58
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=71.30 E-value=2.9 Score=31.42 Aligned_cols=81 Identities=20% Similarity=0.338 Sum_probs=52.0
Q ss_pred CccCccCCCC-CCCCcEeecCCCCCCccccCCCCceecCC---CCCCCccccccCCCCCCCceecccCCCCCCCeeEEcC
Q 035521 30 TTSCSACKLQ-PSGLMYTCKPCNFTLHVSCTQMPQLITHP---SHPAHSLSLVPTPIYPAGIFNCDGCGRQGHGFSYHCT 105 (302)
Q Consensus 30 ~~~Cd~C~~~-~~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp---~Hp~H~L~L~~~~~~~~~~~~C~~C~~~i~G~~Y~C~ 105 (302)
...|+.|.+. .....-.|..|+-.++..|... .|. .-..|.|...... .......|..-. .....|.|.
T Consensus 3 e~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~----~h~~~~~~~~h~l~~~~~~-~~~~~~~C~~H~--~e~l~~fC~ 75 (101)
T 2jun_A 3 KVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKA----THPNKKPFTGHRLIEPIPD-SHIRGLMCLEHE--DEKVNMYCV 75 (101)
T ss_dssp CCBCTTCCSSSCCBCCEEETTTTEEECHHHHHH----HSCSCSSSTTCCBSSCCCS-CCSSCCCCSSCS--SSCCCEEET
T ss_pred CCCCcCCCCCCCCCceEECCcCChHHhHHHCHH----HhccCCccCCCeeeccccc-cCccCCcCcCcC--CCcceEECC
Confidence 5789999964 4566789999999999999962 121 1124655532211 011233455442 123568999
Q ss_pred CCCccccccccC
Q 035521 106 HCDFDLHILCAT 117 (302)
Q Consensus 106 ~CdfdlH~~Ca~ 117 (302)
+|+.-++..|..
T Consensus 76 ~~~~~iC~~C~~ 87 (101)
T 2jun_A 76 TDDQLICALCKL 87 (101)
T ss_dssp TTTEEECHHHHH
T ss_pred CCCCccchhcCC
Confidence 999999999985
No 59
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=69.57 E-value=2.9 Score=29.20 Aligned_cols=49 Identities=24% Similarity=0.558 Sum_probs=37.0
Q ss_pred CceecccCCCCCCCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCccccccccccccc
Q 035521 86 GIFNCDGCGRQGHGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKKV 152 (302)
Q Consensus 86 ~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k~ 152 (302)
....|.+|++. +....|..|+-.+|..|...|.. ..| ...|.|..|.+.
T Consensus 10 ~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~p~l~-------------~~p---~g~W~C~~C~~~ 58 (61)
T 2l5u_A 10 HQDYCEVCQQG--GEIILCDTCPRAYHMVCLDPDME-------------KAP---EGKWSCPHCEKE 58 (61)
T ss_dssp CCSSCTTTSCC--SSEEECSSSSCEEEHHHHCTTCC-------------SCC---CSSCCCTTGGGG
T ss_pred CCCCCccCCCC--CcEEECCCCChhhhhhccCCCCC-------------CCC---CCceECcccccc
Confidence 46789999974 67889999999999999876421 111 357899999764
No 60
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=68.57 E-value=2.6 Score=30.50 Aligned_cols=47 Identities=30% Similarity=0.754 Sum_probs=35.8
Q ss_pred CccCccCCCCC---CCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCC
Q 035521 30 TTSCSACKLQP---SGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGR 95 (302)
Q Consensus 30 ~~~Cd~C~~~~---~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~ 95 (302)
...|.+|++.. .+..-.|..|+..+|..|...|. + | .+.|+|..|..
T Consensus 16 ~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~--------------v--P---~g~W~C~~C~~ 65 (71)
T 2ku3_A 16 DAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--------------I--P---EGQWLCRHCLQ 65 (71)
T ss_dssp SCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS--------------C--C---SSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc--------------C--C---CCCcCCccCcC
Confidence 67899998753 45789999999999999997431 1 1 24789988853
No 61
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=67.10 E-value=7.7 Score=26.92 Aligned_cols=48 Identities=29% Similarity=0.725 Sum_probs=35.1
Q ss_pred CccCccCCCCCCCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCCC
Q 035521 30 TTSCSACKLQPSGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGRQ 96 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~~ 96 (302)
...|..|+.. +..-.|..|+-.+|..|...| |.-+ + .+.|+|..|...
T Consensus 9 ~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~pp------------l~~~--p---~g~W~C~~C~~~ 56 (61)
T 1mm2_A 9 MEFCRVCKDG--GELLCCDTCPSSYHIHCLNPP------------LPEI--P---NGEWLCPRCTCP 56 (61)
T ss_dssp CSSCTTTCCC--SSCBCCSSSCCCBCSSSSSSC------------CSSC--C---SSCCCCTTTTTT
T ss_pred CCcCCCCCCC--CCEEEcCCCCHHHcccccCCC------------cCcC--C---CCccCChhhcCc
Confidence 5679999863 567889999999999999732 2211 1 357999999754
No 62
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=66.52 E-value=4.2 Score=29.21 Aligned_cols=45 Identities=20% Similarity=0.380 Sum_probs=32.3
Q ss_pred CCCeeecCCCCCCCccCccCCCCCCC-CcEeecCCCCCCccccCCCC
Q 035521 17 HLLELSNPQTLNTTTSCSACKLQPSG-LMYTCKPCNFTLHVSCTQMP 62 (302)
Q Consensus 17 HpL~l~~~~~~~~~~~Cd~C~~~~~g-~~Y~C~~C~f~lH~~Ca~~P 62 (302)
-|-+..+.. ......|..|+....+ ..-.|..|+-.+|..|+..+
T Consensus 6 ~P~~~~~~~-~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~ 51 (75)
T 2k16_A 6 MAYVIRDEW-GNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIM 51 (75)
T ss_dssp SSSEEECSS-SCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCS
T ss_pred CCCcccccc-CCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCC
Confidence 444443332 2246789999987655 57899999999999999854
No 63
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=65.83 E-value=4.8 Score=27.98 Aligned_cols=34 Identities=21% Similarity=0.600 Sum_probs=28.3
Q ss_pred CCccCccCCCCC--CCCcEeecCCCCCCccccCCCC
Q 035521 29 TTTSCSACKLQP--SGLMYTCKPCNFTLHVSCTQMP 62 (302)
Q Consensus 29 ~~~~Cd~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~P 62 (302)
+...|..|+++. .+..-.|..|+--+|..|+.++
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~ 40 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKIT 40 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCC
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcC
Confidence 367899999875 4567899999999999999854
No 64
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=65.77 E-value=3.9 Score=31.89 Aligned_cols=81 Identities=21% Similarity=0.381 Sum_probs=50.1
Q ss_pred ceecccCCCC------C-CCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCc-ccccccccccccc-ccce
Q 035521 87 IFNCDGCGRQ------G-HGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYY-TEGFSCDICKKVG-SAHW 157 (302)
Q Consensus 87 ~~~C~~C~~~------i-~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~-~~~~~C~vC~k~~-~~~~ 157 (302)
...|..|... . .+....|..|.-.+|..|..+...+.-. +....+. ..=..|.+|++.+ ....
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~--------~~~~~W~C~~C~~C~vC~~~~~~~~~ 76 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVR--------VKALRWQCIECKTCSSCRDQGKNADN 76 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHH--------HHTSCCCCTTTCCBTTTCCCCCTTCC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHH--------hhccccccccCCccccccCcCCCccc
Confidence 4578888643 1 2367899999999999999763222100 0000000 0112567777542 2245
Q ss_pred eEEcCCCCccccccCccc
Q 035521 158 LYRCSLCEFDAHLDCAAN 175 (302)
Q Consensus 158 ~YrC~~C~f~lH~~Ca~~ 175 (302)
...|..|+-.+|..|..-
T Consensus 77 ll~Cd~C~~~yH~~Cl~p 94 (112)
T 3v43_A 77 MLFCDSCDRGFHMECCDP 94 (112)
T ss_dssp CEECTTTCCEECGGGCSS
T ss_pred eEEcCCCCCeeecccCCC
Confidence 778999999999999864
No 65
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=64.75 E-value=3.8 Score=29.65 Aligned_cols=49 Identities=20% Similarity=0.462 Sum_probs=37.1
Q ss_pred CceecccCCCCC---CCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCccccccccccccc
Q 035521 86 GIFNCDGCGRQG---HGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKKV 152 (302)
Q Consensus 86 ~~~~C~~C~~~i---~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k~ 152 (302)
....|.+|++.. .+....|..|+..+|..|...+. .| .+.|.|..|...
T Consensus 15 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~---------------vP---~g~W~C~~C~~~ 66 (71)
T 2ku3_A 15 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY---------------IP---EGQWLCRHCLQS 66 (71)
T ss_dssp SSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS---------------CC---SSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc---------------CC---CCCcCCccCcCc
Confidence 467899998753 45788999999999999987652 11 356899999753
No 66
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=64.23 E-value=7.9 Score=29.52 Aligned_cols=32 Identities=28% Similarity=0.784 Sum_probs=26.2
Q ss_pred CCccCccCCCCC-CCCcEeecCCCCCCccccCCC
Q 035521 29 TTTSCSACKLQP-SGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 29 ~~~~Cd~C~~~~-~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
+...| .|+... .+..-.|..|+-.+|..|+..
T Consensus 27 d~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~ 59 (98)
T 2lv9_A 27 DVTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGI 59 (98)
T ss_dssp CBCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTC
T ss_pred CCEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCC
Confidence 35678 798864 467899999999999999974
No 67
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=63.22 E-value=14 Score=27.93 Aligned_cols=49 Identities=29% Similarity=0.735 Sum_probs=35.8
Q ss_pred CCCccCccCCCCCCCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCC
Q 035521 28 NTTTSCSACKLQPSGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGR 95 (302)
Q Consensus 28 ~~~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~ 95 (302)
.....|..|++. +....|..|+-.+|..|...| |.-+ | .+.|+|..|..
T Consensus 23 ~n~~~C~vC~~~--g~LL~CD~C~~~fH~~Cl~Pp------------L~~~--P---~g~W~C~~C~~ 71 (88)
T 1fp0_A 23 DSATICRVCQKP--GDLVMCNQCEFCFHLDCHLPA------------LQDV--P---GEEWSCSLCHV 71 (88)
T ss_dssp SSSSCCSSSCSS--SCCEECTTSSCEECTTSSSTT------------CCCC--C---SSSCCCCSCCC
T ss_pred CCCCcCcCcCCC--CCEEECCCCCCceecccCCCC------------CCCC--c---CCCcCCccccC
Confidence 346789999975 567899999999999999632 2211 1 35788998874
No 68
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=63.08 E-value=2.3 Score=29.91 Aligned_cols=30 Identities=23% Similarity=0.620 Sum_probs=24.7
Q ss_pred ccCccCCCCCCC-CcEeecCCCCCCccccCC
Q 035521 31 TSCSACKLQPSG-LMYTCKPCNFTLHVSCTQ 60 (302)
Q Consensus 31 ~~Cd~C~~~~~g-~~Y~C~~C~f~lH~~Ca~ 60 (302)
..|-+|..++.. .+|+|..|..+++.+|-.
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~ 46 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDV 46 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHH
T ss_pred CcccccCcccCCCccEECCccCcCcccchhH
Confidence 469999997644 359999999999999974
No 69
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=62.61 E-value=6.1 Score=28.22 Aligned_cols=37 Identities=24% Similarity=0.417 Sum_probs=29.0
Q ss_pred cccccccccccccccceeEEcCCCCccccccCccccCC
Q 035521 141 TEGFSCDICKKVGSAHWLYRCSLCEFDAHLDCAANLLA 178 (302)
Q Consensus 141 ~~~~~C~vC~k~~~~~~~YrC~~C~f~lH~~Ca~~~~~ 178 (302)
.....| +|++.........|..|+-.+|..|+.+...
T Consensus 17 ~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~ 53 (68)
T 3o70_A 17 QGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKS 53 (68)
T ss_dssp TTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTT
T ss_pred CCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcc
Confidence 345678 9998654456889999999999999987654
No 70
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=61.28 E-value=4.5 Score=30.59 Aligned_cols=61 Identities=16% Similarity=0.476 Sum_probs=40.8
Q ss_pred CccCccCCCCCCCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCC
Q 035521 30 TTSCSACKLQPSGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGR 95 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~ 95 (302)
+..|.+|..--.+..|.|..|.-.+|..|...+-...-. ..+...+...+ ...|.|--|..
T Consensus 15 D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~--~a~e~~l~A~T---~~GWSC~~Cen 75 (89)
T 1wil_A 15 DEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGD--SAAEVTEMAHT---ETGWSCHYCDN 75 (89)
T ss_dssp SCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCC--CCCSCSCCCSS---SSSCCCTTTCC
T ss_pred CcccCccccccccceeccccccccccHhhcccccccccH--HHHHHHHccCC---CCCccccccch
Confidence 568999997667778999999999999999743222211 12444443322 34677877754
No 71
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=60.51 E-value=7.3 Score=25.72 Aligned_cols=47 Identities=26% Similarity=0.704 Sum_probs=34.1
Q ss_pred cCccCCCCC-CCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCC
Q 035521 32 SCSACKLQP-SGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGR 95 (302)
Q Consensus 32 ~Cd~C~~~~-~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~ 95 (302)
.|..|++.. .+..-.|..|+-.+|..|...| |.- .| .+.|+|..|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~------------l~~--~P---~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPA------------LYE--VP---DGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTT------------CCS--CC---SSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCC------------cCC--CC---CCcEECcCccc
Confidence 488998864 4567999999999999999732 221 11 34789998865
No 72
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=59.99 E-value=4 Score=29.34 Aligned_cols=38 Identities=21% Similarity=0.393 Sum_probs=29.5
Q ss_pred cccccccccccccccceeEEcCCCCccccccCccccCC
Q 035521 141 TEGFSCDICKKVGSAHWLYRCSLCEFDAHLDCAANLLA 178 (302)
Q Consensus 141 ~~~~~C~vC~k~~~~~~~YrC~~C~f~lH~~Ca~~~~~ 178 (302)
.....|.+|++.........|..|+-.+|..|+..+..
T Consensus 16 ~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~ 53 (75)
T 2k16_A 16 NQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAA 53 (75)
T ss_dssp CEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSC
T ss_pred CCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCcc
Confidence 34568999998643335678999999999999987554
No 73
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=59.49 E-value=4.3 Score=30.48 Aligned_cols=42 Identities=26% Similarity=0.621 Sum_probs=30.9
Q ss_pred CCCCeeecCCCCCCCccCccCCCCCCCCcEeecC--CCCCCccccCC
Q 035521 16 LHLLELSNPQTLNTTTSCSACKLQPSGLMYTCKP--CNFTLHVSCTQ 60 (302)
Q Consensus 16 ~HpL~l~~~~~~~~~~~Cd~C~~~~~g~~Y~C~~--C~f~lH~~Ca~ 60 (302)
.|.|.+-... ...+|..|++.-.|..-.|.. |.-.+|..||.
T Consensus 6 ~~~~NIp~~R---~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 6 HHHMNIPPAR---WKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp ---CCCCCCC---CCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHH
T ss_pred ccccCCChHH---hcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHH
Confidence 3555554443 267899999875688899986 99999999996
No 74
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=58.88 E-value=2.9 Score=29.36 Aligned_cols=32 Identities=22% Similarity=0.462 Sum_probs=25.0
Q ss_pred ccccccccccccceeEEcCCCCccccccCccc
Q 035521 144 FSCDICKKVGSAHWLYRCSLCEFDAHLDCAAN 175 (302)
Q Consensus 144 ~~C~vC~k~~~~~~~YrC~~C~f~lH~~Ca~~ 175 (302)
..|-+|.+......+|+|..|..+++.+|-..
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~f 47 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDVF 47 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHHT
T ss_pred CcccccCcccCCCccEECCccCcCcccchhHH
Confidence 35999988653344699999999999888755
No 75
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=58.25 E-value=6.9 Score=33.67 Aligned_cols=61 Identities=23% Similarity=0.543 Sum_probs=40.9
Q ss_pred CceecccCCCCCCCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCccccccccccccccccceeEEcCCC
Q 035521 86 GIFNCDGCGRQGHGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKKVGSAHWLYRCSLC 164 (302)
Q Consensus 86 ~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k~~~~~~~YrC~~C 164 (302)
....|.+|+.. |....|..|+-.+|..|..-|.. ..| .+.|.|..|.........|.|..+
T Consensus 6 ~~~~C~~C~~~--g~ll~Cd~C~~~~H~~Cl~p~l~--------------~~p--~~~W~C~~C~~~~~~~~~~~c~~~ 66 (207)
T 3u5n_A 6 NEDWCAVCQNG--GDLLCCEKCPKVFHLTCHVPTLL--------------SFP--SGDWICTFCRDIGKPEVEYDCDNL 66 (207)
T ss_dssp SCSSBTTTCCC--EEEEECSSSSCEECTTTSSSCCS--------------SCC--SSCCCCTTTSCSSSCSSCCSCC--
T ss_pred CCCCCCCCCCC--CceEEcCCCCCccCCccCCCCCC--------------CCC--CCCEEeCceeCccccccccccccc
Confidence 35679999965 46789999999999999764311 111 456999999875433345666543
No 76
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=56.80 E-value=4.2 Score=26.95 Aligned_cols=31 Identities=32% Similarity=0.700 Sum_probs=25.1
Q ss_pred cccccccccccceeEEcCCCCccccccCccc
Q 035521 145 SCDICKKVGSAHWLYRCSLCEFDAHLDCAAN 175 (302)
Q Consensus 145 ~C~vC~k~~~~~~~YrC~~C~f~lH~~Ca~~ 175 (302)
.|.+|++.........|..|+-.+|..|+.-
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p 32 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRP 32 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCT
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCC
Confidence 5899997654446778999999999999964
No 77
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=56.13 E-value=8.2 Score=27.13 Aligned_cols=47 Identities=28% Similarity=0.822 Sum_probs=34.9
Q ss_pred CccCccCCCCCCCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCC
Q 035521 30 TTSCSACKLQPSGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGR 95 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~ 95 (302)
...|..|+.. +....|..|+-.+|..|...| |..+ | .+.|+|..|..
T Consensus 8 ~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~pp------------l~~~--P---~g~W~C~~C~~ 54 (66)
T 1xwh_A 8 EDECAVCRDG--GELICCDGCPRAFHLACLSPP------------LREI--P---SGTWRCSSCLQ 54 (66)
T ss_dssp CCSBSSSSCC--SSCEECSSCCCEECTTTSSSC------------CSSC--C---SSCCCCHHHHH
T ss_pred CCCCccCCCC--CCEEEcCCCChhhcccccCCC------------cCcC--C---CCCeECccccC
Confidence 5689999964 567999999999999999732 2211 1 24789999964
No 78
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=54.85 E-value=7.5 Score=29.64 Aligned_cols=34 Identities=24% Similarity=0.495 Sum_probs=26.7
Q ss_pred cccccccccccccceeEEcCCCCccccccCccccC
Q 035521 143 GFSCDICKKVGSAHWLYRCSLCEFDAHLDCAANLL 177 (302)
Q Consensus 143 ~~~C~vC~k~~~~~~~YrC~~C~f~lH~~Ca~~~~ 177 (302)
...| +|++....+....|..|+-.+|..|+..+.
T Consensus 28 ~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~ 61 (98)
T 2lv9_A 28 VTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDR 61 (98)
T ss_dssp BCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCT
T ss_pred CEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCc
Confidence 3567 898765456788899999999999997643
No 79
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=54.70 E-value=11 Score=26.13 Aligned_cols=53 Identities=21% Similarity=0.320 Sum_probs=37.0
Q ss_pred CceecccCCCCC---CCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCcccccccccccc
Q 035521 86 GIFNCDGCGRQG---HGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKK 151 (302)
Q Consensus 86 ~~~~C~~C~~~i---~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k 151 (302)
....|.+|+..- .+....|..|+-.+|..|...|.... ..+ ....|.|..|..
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~-----------~~~--p~~~W~C~~C~~ 60 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSS-----------VID--SDEKWLCRQCVF 60 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHH-----------HHH--SSCCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCccccc-----------ccC--CCCCEECCCCcC
Confidence 467899999752 36789999999999999987542110 000 134688999865
No 80
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=54.40 E-value=9.9 Score=26.28 Aligned_cols=37 Identities=24% Similarity=0.440 Sum_probs=28.6
Q ss_pred ccccccccccccc-cceeEEcCCCCccccccCccccCC
Q 035521 142 EGFSCDICKKVGS-AHWLYRCSLCEFDAHLDCAANLLA 178 (302)
Q Consensus 142 ~~~~C~vC~k~~~-~~~~YrC~~C~f~lH~~Ca~~~~~ 178 (302)
....|.+|++... ....-.|..|+--+|..|+.+...
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~ 42 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPA 42 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTT
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChh
Confidence 4567999998632 345778999999999999988544
No 81
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=54.07 E-value=6.9 Score=29.26 Aligned_cols=84 Identities=13% Similarity=0.165 Sum_probs=49.3
Q ss_pred ceecccCCCC-CCCeeEEcCCCCccccccccCC-CcceecccccccceEeecCCCccccccccccccccccceeEEcCCC
Q 035521 87 IFNCDGCGRQ-GHGFSYHCTHCDFDLHILCATK-PLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKKVGSAHWLYRCSLC 164 (302)
Q Consensus 87 ~~~C~~C~~~-i~G~~Y~C~~CdfdlH~~Ca~l-P~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k~~~~~~~YrC~~C 164 (302)
...|++|.+. .......|..|+..++..|... -... ...-.|.|+..... .......|..-.. ....|.|.+|
T Consensus 3 e~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~h~~~-~~~~~h~l~~~~~~-~~~~~~~C~~H~~---e~l~~fC~~~ 77 (101)
T 2jun_A 3 KVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNK-KPFTGHRLIEPIPD-SHIRGLMCLEHED---EKVNMYCVTD 77 (101)
T ss_dssp CCBCTTCCSSSCCBCCEEETTTTEEECHHHHHHHSCSC-SSSTTCCBSSCCCS-CCSSCCCCSSCSS---SCCCEEETTT
T ss_pred CCCCcCCCCCCCCCceEECCcCChHHhHHHCHHHhccC-CccCCCeeeccccc-cCccCCcCcCcCC---CcceEECCCC
Confidence 4689999864 3456688999999999999764 1100 01113454311110 0112234444321 2245679999
Q ss_pred CccccccCccc
Q 035521 165 EFDAHLDCAAN 175 (302)
Q Consensus 165 ~f~lH~~Ca~~ 175 (302)
..-++..|...
T Consensus 78 ~~~iC~~C~~~ 88 (101)
T 2jun_A 78 DQLICALCKLV 88 (101)
T ss_dssp TEEECHHHHHH
T ss_pred CCccchhcCCC
Confidence 99999999863
No 82
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=53.00 E-value=9.8 Score=26.44 Aligned_cols=33 Identities=21% Similarity=0.539 Sum_probs=27.4
Q ss_pred CCccCccCCCCC---CCCcEeecCCCCCCccccCCC
Q 035521 29 TTTSCSACKLQP---SGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 29 ~~~~Cd~C~~~~---~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
....|.+|+... .+....|..|+-.+|..|...
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p 40 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTP 40 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSS
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCC
Confidence 367899999753 367899999999999999974
No 83
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=52.91 E-value=7 Score=29.32 Aligned_cols=43 Identities=30% Similarity=0.688 Sum_probs=31.1
Q ss_pred CccccccCCCCCCCceecccCCCCCCCeeEEcCC--CCccccccccCCC
Q 035521 73 HSLSLVPTPIYPAGIFNCDGCGRQGHGFSYHCTH--CDFDLHILCATKP 119 (302)
Q Consensus 73 H~L~L~~~~~~~~~~~~C~~C~~~i~G~~Y~C~~--CdfdlH~~Ca~lP 119 (302)
|.|.+.... -..+|..|++...|-.-.|.. |...+|+.||...
T Consensus 7 ~~~NIp~~R----~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~a 51 (87)
T 2lq6_A 7 HHMNIPPAR----WKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQKA 51 (87)
T ss_dssp --CCCCCCC----CCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHHH
T ss_pred cccCCChHH----hcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHHC
Confidence 446653321 256899998765688899985 9999999999854
No 84
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=51.29 E-value=13 Score=26.45 Aligned_cols=33 Identities=27% Similarity=0.687 Sum_probs=27.6
Q ss_pred CCccCccCCCCCCC-CcEeecCCCCCCccccCCCC
Q 035521 29 TTTSCSACKLQPSG-LMYTCKPCNFTLHVSCTQMP 62 (302)
Q Consensus 29 ~~~~Cd~C~~~~~g-~~Y~C~~C~f~lH~~Ca~~P 62 (302)
....| .|+++..+ ..-.|..|+.-+|..|+..+
T Consensus 18 ~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~ 51 (68)
T 3o70_A 18 GLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIR 51 (68)
T ss_dssp TCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCC
T ss_pred CceEe-ECCCcCCCCCEEECCCCCccccccccCcC
Confidence 47889 99987554 67999999999999999853
No 85
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=50.95 E-value=24 Score=26.54 Aligned_cols=32 Identities=25% Similarity=0.621 Sum_probs=26.8
Q ss_pred CCceecccCCCCCCCeeEEcCCCCccccccccCC
Q 035521 85 AGIFNCDGCGRQGHGFSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 85 ~~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~l 118 (302)
.....|.+|++. +....|..|+-.+|..|..-
T Consensus 23 ~n~~~C~vC~~~--g~LL~CD~C~~~fH~~Cl~P 54 (88)
T 1fp0_A 23 DSATICRVCQKP--GDLVMCNQCEFCFHLDCHLP 54 (88)
T ss_dssp SSSSCCSSSCSS--SCCEECTTSSCEECTTSSST
T ss_pred CCCCcCcCcCCC--CCEEECCCCCCceecccCCC
Confidence 457799999975 46789999999999999854
No 86
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.60 E-value=13 Score=25.09 Aligned_cols=32 Identities=25% Similarity=0.524 Sum_probs=26.8
Q ss_pred CceecccCCCCCCCeeEEcCCCCccccccccCCC
Q 035521 86 GIFNCDGCGRQGHGFSYHCTHCDFDLHILCATKP 119 (302)
Q Consensus 86 ~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~lP 119 (302)
....|.+|++. +....|..|+-.+|..|...|
T Consensus 8 ~~~~C~vC~~~--g~ll~Cd~C~~~~H~~Cl~pp 39 (56)
T 2yql_A 8 HEDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPP 39 (56)
T ss_dssp SCCSCSSSCCS--SCCEECSSSSCEECSSSSSSC
T ss_pred CCCCCccCCCC--CeEEEcCCCCcceECccCCCC
Confidence 46789999975 577899999999999998753
No 87
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=50.42 E-value=11 Score=28.22 Aligned_cols=33 Identities=18% Similarity=0.583 Sum_probs=27.2
Q ss_pred CccCccCCCCC---CCCcEeecCCCCCCccccCCCC
Q 035521 30 TTSCSACKLQP---SGLMYTCKPCNFTLHVSCTQMP 62 (302)
Q Consensus 30 ~~~Cd~C~~~~---~g~~Y~C~~C~f~lH~~Ca~~P 62 (302)
...|.+|+... .+..-.|..|+..+|..|...|
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Pp 51 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQ 51 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSC
T ss_pred CCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCc
Confidence 45799999863 3678999999999999999743
No 88
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.30 E-value=16 Score=24.69 Aligned_cols=31 Identities=26% Similarity=0.735 Sum_probs=26.2
Q ss_pred CCccCccCCCCCCCCcEeecCCCCCCccccCCC
Q 035521 29 TTTSCSACKLQPSGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 29 ~~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
....|..|++. +..-.|..|+-.+|..|...
T Consensus 8 ~~~~C~vC~~~--g~ll~Cd~C~~~~H~~Cl~p 38 (56)
T 2yql_A 8 HEDFCSVCRKS--GQLLMCDTCSRVYHLDCLDP 38 (56)
T ss_dssp SCCSCSSSCCS--SCCEECSSSSCEECSSSSSS
T ss_pred CCCCCccCCCC--CeEEEcCCCCcceECccCCC
Confidence 36789999975 56789999999999999974
No 89
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.20 E-value=8.1 Score=28.10 Aligned_cols=34 Identities=24% Similarity=0.586 Sum_probs=27.0
Q ss_pred CCCceecccCCCCCCCeeEEcCCCCccccccccCC
Q 035521 84 PAGIFNCDGCGRQGHGFSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 84 ~~~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~l 118 (302)
.+....|.+|+..+. ...+|..|+..+|..|+..
T Consensus 12 ~~~i~~C~IC~~~i~-~g~~C~~C~h~fH~~Ci~k 45 (74)
T 2ct0_A 12 PDAVKICNICHSLLI-QGQSCETCGIRMHLPCVAK 45 (74)
T ss_dssp SSSSCBCSSSCCBCS-SSEECSSSCCEECHHHHHH
T ss_pred cCCCCcCcchhhHcc-cCCccCCCCchhhHHHHHH
Confidence 345678999998774 4578999999999999864
No 90
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=47.38 E-value=13 Score=31.15 Aligned_cols=58 Identities=24% Similarity=0.576 Sum_probs=39.1
Q ss_pred ceecccCCCCCCCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCccccccccccccccccceeEEcC
Q 035521 87 IFNCDGCGRQGHGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKKVGSAHWLYRCS 162 (302)
Q Consensus 87 ~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k~~~~~~~YrC~ 162 (302)
...|.+|++. |....|..|+-.+|..|...|.. ..| .+.|.|..|.........|.|.
T Consensus 4 ~~~C~~C~~~--g~ll~Cd~C~~~~H~~C~~p~l~--------------~~p--~~~W~C~~C~~~~~~~~e~dc~ 61 (184)
T 3o36_A 4 EDWCAVCQNG--GELLCCEKCPKVFHLSCHVPTLT--------------NFP--SGEWICTFCRDLSKPEVEYDCD 61 (184)
T ss_dssp CSSCTTTCCC--SSCEECSSSSCEECTTTSSSCCS--------------SCC--SSCCCCTTTSCSSSCSSCCGGG
T ss_pred CCccccCCCC--CeeeecCCCCcccCccccCCCCC--------------CCC--CCCEECccccCccccccccccc
Confidence 4579999975 55789999999999999754311 111 3569999998643222345554
No 91
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=46.62 E-value=6.5 Score=31.39 Aligned_cols=31 Identities=23% Similarity=0.489 Sum_probs=26.4
Q ss_pred CccCccCCCCCC--CCcEeecCCCCCCccccCC
Q 035521 30 TTSCSACKLQPS--GLMYTCKPCNFTLHVSCTQ 60 (302)
Q Consensus 30 ~~~Cd~C~~~~~--g~~Y~C~~C~f~lH~~Ca~ 60 (302)
...|..|..++. .-+++|..|+..+|..|..
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~ 101 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECSA 101 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSC
T ss_pred CCCCcCcCCccccccccccCCCCCeEEChHHhC
Confidence 457999999753 4569999999999999996
No 92
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=46.54 E-value=13 Score=27.67 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=27.0
Q ss_pred ceecccCCCCC---CCeeEEcCCCCccccccccCCC
Q 035521 87 IFNCDGCGRQG---HGFSYHCTHCDFDLHILCATKP 119 (302)
Q Consensus 87 ~~~C~~C~~~i---~G~~Y~C~~CdfdlH~~Ca~lP 119 (302)
...|.+|++.- .+....|..|+-.+|..|..-|
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Pp 51 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQ 51 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSC
T ss_pred CCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCc
Confidence 46899999753 2578899999999999998754
No 93
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=46.23 E-value=16 Score=25.60 Aligned_cols=49 Identities=24% Similarity=0.569 Sum_probs=36.1
Q ss_pred CceecccCCCCCCCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCccccccccccccc
Q 035521 86 GIFNCDGCGRQGHGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKKV 152 (302)
Q Consensus 86 ~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k~ 152 (302)
....|.+|+.. +....|..|+-.+|..|...|.. ..| .+.|.|..|...
T Consensus 7 ~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~ppl~-------------~~P---~g~W~C~~C~~~ 55 (66)
T 1xwh_A 7 NEDECAVCRDG--GELICCDGCPRAFHLACLSPPLR-------------EIP---SGTWRCSSCLQA 55 (66)
T ss_dssp CCCSBSSSSCC--SSCEECSSCCCEECTTTSSSCCS-------------SCC---SSCCCCHHHHHT
T ss_pred CCCCCccCCCC--CCEEEcCCCChhhcccccCCCcC-------------cCC---CCCeECccccCc
Confidence 46789999975 56789999999999999874321 111 356899999753
No 94
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=45.31 E-value=9.1 Score=27.54 Aligned_cols=34 Identities=26% Similarity=0.564 Sum_probs=26.9
Q ss_pred cccccccccccccceeEEcCCCCccccccCccccC
Q 035521 143 GFSCDICKKVGSAHWLYRCSLCEFDAHLDCAANLL 177 (302)
Q Consensus 143 ~~~C~vC~k~~~~~~~YrC~~C~f~lH~~Ca~~~~ 177 (302)
...| +|++.......-.|..|+-.+|..|+.+..
T Consensus 16 ~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~ 49 (76)
T 1wem_A 16 ALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISE 49 (76)
T ss_dssp CCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCH
T ss_pred CCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccch
Confidence 4667 899865445678899999999999997743
No 95
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=44.39 E-value=13 Score=26.61 Aligned_cols=31 Identities=19% Similarity=0.581 Sum_probs=23.0
Q ss_pred cccccccccccceeEEcCCCCccccccCccc
Q 035521 145 SCDICKKVGSAHWLYRCSLCEFDAHLDCAAN 175 (302)
Q Consensus 145 ~C~vC~k~~~~~~~YrC~~C~f~lH~~Ca~~ 175 (302)
.|.+|++....+....|..|+-.+|..|+.-
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~P 50 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDP 50 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSS
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCC
Confidence 3456776433456778999999999999974
No 96
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.87 E-value=13 Score=28.02 Aligned_cols=34 Identities=21% Similarity=0.593 Sum_probs=26.8
Q ss_pred ccccccccccccccceeEEcCCCCccccccCccc
Q 035521 142 EGFSCDICKKVGSAHWLYRCSLCEFDAHLDCAAN 175 (302)
Q Consensus 142 ~~~~C~vC~k~~~~~~~YrC~~C~f~lH~~Ca~~ 175 (302)
....|.+|++.........|..|+-.+|..|+.-
T Consensus 15 ~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~P 48 (92)
T 2e6r_A 15 DSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLP 48 (92)
T ss_dssp CCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSS
T ss_pred CCCCCccCCCcCCCCCEEEcCCCCchhccccCCC
Confidence 3457999987643345778999999999999974
No 97
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=43.79 E-value=11 Score=26.71 Aligned_cols=48 Identities=27% Similarity=0.540 Sum_probs=35.0
Q ss_pred ceecccCCCCCCCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCccccccccccccc
Q 035521 87 IFNCDGCGRQGHGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKKV 152 (302)
Q Consensus 87 ~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k~ 152 (302)
...|.+|++. +....|..|+-.+|..|...|. . ..| ...|.|..|...
T Consensus 12 ~~~C~vC~~~--~~ll~Cd~C~~~~H~~Cl~P~l-----------~--~~P---~g~W~C~~C~~~ 59 (66)
T 2lri_C 12 GARCGVCGDG--TDVLRCTHCAAAFHWRCHFPAG-----------T--SRP---GTGLRCRSCSGD 59 (66)
T ss_dssp TCCCTTTSCC--TTCEECSSSCCEECHHHHCTTT-----------C--CCC---SSSCCCTTTTTC
T ss_pred CCCcCCCCCC--CeEEECCCCCCceecccCCCcc-----------C--cCC---CCCEECccccCC
Confidence 5679999875 4578999999999999986431 1 111 356899999753
No 98
>3ny3_A E3 ubiquitin-protein ligase UBR2; zinc finger-like, ubiquitin ligase, protein binding, lygase,; 1.60A {Homo sapiens} PDB: 3ny2_A 3ny1_A
Probab=43.43 E-value=8.2 Score=28.29 Aligned_cols=40 Identities=25% Similarity=0.599 Sum_probs=27.5
Q ss_pred ccccccc-ccceeEEcCCCC----ccccccCccccCCCCCcCCCccccC
Q 035521 147 DICKKVG-SAHWLYRCSLCE----FDAHLDCAANLLAQPIHTQHQYSLN 190 (302)
Q Consensus 147 ~vC~k~~-~~~~~YrC~~C~----f~lH~~Ca~~~~~~~~~~~H~~s~~ 190 (302)
.+|++.. ...+.|+|.+|. ..|+..|... ..|..|.+++.
T Consensus 5 ~~Cg~vf~~ge~~Y~C~~C~~d~tc~lC~~CF~~----~~H~gH~~~~~ 49 (75)
T 3ny3_A 5 SLCGRVFKVGEPTYSCRDCAVDPTCVLCMECFLG----SIHRDHRYRMT 49 (75)
T ss_dssp -CCCCBCCTTCEEEEETTTBSSTTCCBCHHHHHT----SGGGGSCEEEE
T ss_pred CccCCcccCCCEEEECccCCCCCCeeEChHHCCC----CCcCCceEEEE
Confidence 3566543 245899999995 4577777765 34788988774
No 99
>3nis_A E3 ubiquitin-protein ligase UBR1; E3 ubiquitin ligase, UBR BOX, zinc-binding protein, N-END RU ligase, metal binding protein; 1.68A {Saccharomyces cerevisiae} PDB: 3nii_A 3nij_A 3nih_A 3nik_A 3nim_A 3nin_A 3nil_A 3nit_A
Probab=43.22 E-value=13 Score=27.64 Aligned_cols=40 Identities=23% Similarity=0.395 Sum_probs=27.8
Q ss_pred ccccccc-ccceeEEcCCCC----ccccccCccccCCCCCcCCCccccC
Q 035521 147 DICKKVG-SAHWLYRCSLCE----FDAHLDCAANLLAQPIHTQHQYSLN 190 (302)
Q Consensus 147 ~vC~k~~-~~~~~YrC~~C~----f~lH~~Ca~~~~~~~~~~~H~~s~~ 190 (302)
.+|++.. ...+.|+|.+|. ..|+..|... ..|..|.+++.
T Consensus 9 ~~Cg~vf~~ge~~Y~C~~C~~d~tcvlC~~CF~~----s~H~gH~~~~~ 53 (82)
T 3nis_A 9 RNCGRKFKIGEPLYRCHECGCDDTCVLCIHCFNP----KDHVNHHVCTD 53 (82)
T ss_dssp SCCCCBCCTTCEEEEETTTBSSTTCCBCTTTCCG----GGGTTSCEEEE
T ss_pred CCCCCcccCCCEEEEeeccCCCCCceEchhhCCC----CCcCCceEEEE
Confidence 3566543 245899999995 4588888865 33778888774
No 100
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=42.65 E-value=20 Score=24.53 Aligned_cols=47 Identities=26% Similarity=0.545 Sum_probs=34.9
Q ss_pred ceecccCCCCCCCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCcccccccccccc
Q 035521 87 IFNCDGCGRQGHGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKK 151 (302)
Q Consensus 87 ~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k 151 (302)
...|.+|++. +....|..|+-.+|..|...|.. ..| .+.|.|..|..
T Consensus 5 ~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~ppl~-------------~~p---~g~W~C~~C~~ 51 (60)
T 2puy_A 5 EDFCSVCRKS--GQLLMCDTCSRVYHLDCLDPPLK-------------TIP---KGMWICPRCQD 51 (60)
T ss_dssp CSSCTTTCCC--SSCEECSSSSCEECGGGSSSCCS-------------SCC---CSCCCCHHHHH
T ss_pred CCCCcCCCCC--CcEEEcCCCCcCEECCcCCCCcC-------------CCC---CCceEChhccC
Confidence 5689999975 57789999999999999874321 011 34688999864
No 101
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=42.14 E-value=21 Score=24.39 Aligned_cols=30 Identities=27% Similarity=0.763 Sum_probs=25.7
Q ss_pred CccCccCCCCCCCCcEeecCCCCCCccccCCC
Q 035521 30 TTSCSACKLQPSGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
...|..|+.. +..-.|..|+-.+|..|...
T Consensus 5 ~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~p 34 (60)
T 2puy_A 5 EDFCSVCRKS--GQLLMCDTCSRVYHLDCLDP 34 (60)
T ss_dssp CSSCTTTCCC--SSCEECSSSSCEECGGGSSS
T ss_pred CCCCcCCCCC--CcEEEcCCCCcCEECCcCCC
Confidence 5679999975 67789999999999999973
No 102
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.10 E-value=15 Score=26.76 Aligned_cols=31 Identities=23% Similarity=0.580 Sum_probs=22.5
Q ss_pred cccccccccccceeEEcCCCCccccccCccc
Q 035521 145 SCDICKKVGSAHWLYRCSLCEFDAHLDCAAN 175 (302)
Q Consensus 145 ~C~vC~k~~~~~~~YrC~~C~f~lH~~Ca~~ 175 (302)
.|.+|++....+....|..|+-.+|..|+.-
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~P 58 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLNP 58 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSSS
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccCC
Confidence 4667776433345677999998899999864
No 103
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.86 E-value=8.9 Score=27.87 Aligned_cols=35 Identities=26% Similarity=0.525 Sum_probs=27.7
Q ss_pred ccccccccccccccceeEEcCCCCccccccCccccCC
Q 035521 142 EGFSCDICKKVGSAHWLYRCSLCEFDAHLDCAANLLA 178 (302)
Q Consensus 142 ~~~~C~vC~k~~~~~~~YrC~~C~f~lH~~Ca~~~~~ 178 (302)
.-..|.||+.... ...+|..|+-.+|..|+..-.+
T Consensus 14 ~i~~C~IC~~~i~--~g~~C~~C~h~fH~~Ci~kWl~ 48 (74)
T 2ct0_A 14 AVKICNICHSLLI--QGQSCETCGIRMHLPCVAKYFQ 48 (74)
T ss_dssp SSCBCSSSCCBCS--SSEECSSSCCEECHHHHHHHST
T ss_pred CCCcCcchhhHcc--cCCccCCCCchhhHHHHHHHHH
Confidence 3457999998753 3568999999999999986544
No 104
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=41.82 E-value=12 Score=27.14 Aligned_cols=34 Identities=24% Similarity=0.552 Sum_probs=27.8
Q ss_pred CCccCccCCCCC--CCCcEeecCCCCCCccccCCCCc
Q 035521 29 TTTSCSACKLQP--SGLMYTCKPCNFTLHVSCTQMPQ 63 (302)
Q Consensus 29 ~~~~Cd~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~P~ 63 (302)
....| .|+.+. .+..-.|+.|+--+|..|+.+..
T Consensus 11 ~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~ 46 (79)
T 1wep_A 11 VPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEE 46 (79)
T ss_dssp CCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCH
T ss_pred CccEE-EcCCccCCCCceEEcCCCCCcEEeeecCccc
Confidence 36678 899875 56788999999999999998643
No 105
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=41.82 E-value=17 Score=27.99 Aligned_cols=34 Identities=26% Similarity=0.602 Sum_probs=28.3
Q ss_pred CccCccCCCCC--CCCcEeec-CCCCCCccccCCCCc
Q 035521 30 TTSCSACKLQP--SGLMYTCK-PCNFTLHVSCTQMPQ 63 (302)
Q Consensus 30 ~~~Cd~C~~~~--~g~~Y~C~-~C~f~lH~~Ca~~P~ 63 (302)
.+.|-.|.+++ .+..-.|. .|+-.+|..|..+.+
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~ 39 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTE 39 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCH
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCH
Confidence 46899999984 45678898 899999999998654
No 106
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=40.91 E-value=11 Score=28.30 Aligned_cols=35 Identities=23% Similarity=0.615 Sum_probs=27.4
Q ss_pred cccccccccccc--ccceeEEcCCCCccccccCcccc
Q 035521 142 EGFSCDICKKVG--SAHWLYRCSLCEFDAHLDCAANL 176 (302)
Q Consensus 142 ~~~~C~vC~k~~--~~~~~YrC~~C~f~lH~~Ca~~~ 176 (302)
....|.+|++.. .......|..|+..+|..|+..+
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~ 60 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVP 60 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCS
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCC
Confidence 457899998753 23467789999999999999764
No 107
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=40.79 E-value=18 Score=25.01 Aligned_cols=49 Identities=27% Similarity=0.569 Sum_probs=35.5
Q ss_pred CceecccCCCCCCCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCccccccccccccc
Q 035521 86 GIFNCDGCGRQGHGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKKV 152 (302)
Q Consensus 86 ~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k~ 152 (302)
....|.+|++. +....|..|+-.+|..|...|.. ..| .+.|.|..|...
T Consensus 8 ~~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~ppl~--------------~~p--~g~W~C~~C~~~ 56 (61)
T 1mm2_A 8 HMEFCRVCKDG--GELLCCDTCPSSYHIHCLNPPLP--------------EIP--NGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCTTTCCC--SSCBCCSSSCCCBCSSSSSSCCS--------------SCC--SSCCCCTTTTTT
T ss_pred CCCcCCCCCCC--CCEEEcCCCCHHHcccccCCCcC--------------cCC--CCccCChhhcCc
Confidence 46789999864 56788999999999999874321 111 356889999754
No 108
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=38.45 E-value=9 Score=29.21 Aligned_cols=32 Identities=28% Similarity=0.659 Sum_probs=26.8
Q ss_pred CccCccCCCCC----CC-CcEeecCCCCCCccccCCC
Q 035521 30 TTSCSACKLQP----SG-LMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 30 ~~~Cd~C~~~~----~g-~~Y~C~~C~f~lH~~Ca~~ 61 (302)
.-.|..|+..+ .| .+-.|.+|.|-+|+.|.++
T Consensus 16 ~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEY 52 (93)
T 1weo_A 16 GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEY 52 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHH
T ss_pred CCccccccCccccCCCCCEEEeeeccCChhhHHHHHH
Confidence 46899999874 23 5688999999999999985
No 109
>2ffw_A Midline-1; B-BOX, ring finger, zinc-finger, ligase; NMR {Homo sapiens}
Probab=37.96 E-value=21 Score=25.86 Aligned_cols=32 Identities=22% Similarity=0.614 Sum_probs=25.5
Q ss_pred CCccCccCCCCC-CCCcEeecCCCCCCccccCC
Q 035521 29 TTTSCSACKLQP-SGLMYTCKPCNFTLHVSCTQ 60 (302)
Q Consensus 29 ~~~~Cd~C~~~~-~g~~Y~C~~C~f~lH~~Ca~ 60 (302)
....|+.|...- ....=+|..|+..+|+.|..
T Consensus 29 ~~v~C~~C~~~~~~~A~ksCl~C~~s~C~~hl~ 61 (78)
T 2ffw_A 29 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLK 61 (78)
T ss_dssp CCCBCSSCCSSSCCBCCEEETTTTEEECHHHHH
T ss_pred CCccCCcCCCCCCCCCeeEccCccchhhhhhhH
Confidence 367899998632 45567899999999999996
No 110
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=37.88 E-value=14 Score=26.87 Aligned_cols=36 Identities=17% Similarity=0.400 Sum_probs=28.8
Q ss_pred ccccccccccccccceeEEcC--CCCccccccCccccCC
Q 035521 142 EGFSCDICKKVGSAHWLYRCS--LCEFDAHLDCAANLLA 178 (302)
Q Consensus 142 ~~~~C~vC~k~~~~~~~YrC~--~C~f~lH~~Ca~~~~~ 178 (302)
....| +|++....+..-.|. .|...+|..|+.+...
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~ 52 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDK 52 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCT
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccc
Confidence 45678 899874456778899 9999999999988655
No 111
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=37.80 E-value=24 Score=26.64 Aligned_cols=32 Identities=22% Similarity=0.462 Sum_probs=26.0
Q ss_pred CCccCccCCCCCCCCcEeecCCC---CCCccccCCC
Q 035521 29 TTTSCSACKLQPSGLMYTCKPCN---FTLHVSCTQM 61 (302)
Q Consensus 29 ~~~~Cd~C~~~~~g~~Y~C~~C~---f~lH~~Ca~~ 61 (302)
....| .|.....+..-.|..|+ -.+|..|+.+
T Consensus 25 ~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl 59 (90)
T 2jmi_A 25 EEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGL 59 (90)
T ss_dssp CSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSC
T ss_pred CCcEE-EeCCCCCCCEEEecCCCCccccCcCccCCC
Confidence 46789 89987667788899876 6899999974
No 112
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=37.57 E-value=29 Score=24.58 Aligned_cols=37 Identities=19% Similarity=0.333 Sum_probs=27.7
Q ss_pred ccccccccccccccc-ceeEEcCCCCccccccCccccCC
Q 035521 141 TEGFSCDICKKVGSA-HWLYRCSLCEFDAHLDCAANLLA 178 (302)
Q Consensus 141 ~~~~~C~vC~k~~~~-~~~YrC~~C~f~lH~~Ca~~~~~ 178 (302)
.....| +|++.... ...-.|..|+-.+|..|+.+...
T Consensus 14 ~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~ 51 (72)
T 1wee_A 14 NWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNA 51 (72)
T ss_dssp SSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTT
T ss_pred CcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCcc
Confidence 345678 79986322 35778999999999999988643
No 113
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=37.37 E-value=20 Score=26.13 Aligned_cols=31 Identities=19% Similarity=0.581 Sum_probs=21.5
Q ss_pred cccccccccccceeEEcCCCCccccccCccc
Q 035521 145 SCDICKKVGSAHWLYRCSLCEFDAHLDCAAN 175 (302)
Q Consensus 145 ~C~vC~k~~~~~~~YrC~~C~f~lH~~Ca~~ 175 (302)
.|.+|++.........|..|+-.+|..|..-
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~P 58 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDP 58 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSS
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCC
Confidence 3555655433345677888998999999874
No 114
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=35.77 E-value=25 Score=25.71 Aligned_cols=26 Identities=23% Similarity=0.519 Sum_probs=20.9
Q ss_pred CccCccCCCCCCCCcEeecCCCCCCcc
Q 035521 30 TTSCSACKLQPSGLMYTCKPCNFTLHV 56 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~C~f~lH~ 56 (302)
..+|..|++.+.-..|.| .|+..+|.
T Consensus 25 ~~RC~~C~kkvgL~~f~C-rCg~~FCs 50 (74)
T 1wfp_A 25 ATRCLSCNKKVGVTGFKC-RCGSTFCG 50 (74)
T ss_dssp CCBCSSSCCBCTTTCEEC-TTSCEECT
T ss_pred CccchhhcCcccccceEe-ccCCEecc
Confidence 678999999876668999 79877665
No 115
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=35.44 E-value=20 Score=26.69 Aligned_cols=49 Identities=20% Similarity=0.462 Sum_probs=36.7
Q ss_pred CceecccCCCCC---CCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCccccccccccccc
Q 035521 86 GIFNCDGCGRQG---HGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKKV 152 (302)
Q Consensus 86 ~~~~C~~C~~~i---~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k~ 152 (302)
....|.+|+... .+....|..|+..+|..|...+. .| .+.|.|..|...
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~---------------vP---~g~W~C~~C~~~ 75 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY---------------IP---EGQWLCRHCLQS 75 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS---------------CC---SSCCCCHHHHHH
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc---------------cC---CCceECccccCc
Confidence 467899999753 24678999999999999987642 11 346899999753
No 116
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=34.99 E-value=19 Score=26.10 Aligned_cols=34 Identities=26% Similarity=0.699 Sum_probs=28.5
Q ss_pred CCccCccCCCC-CCCCcEeec--CCCCCCccccCCCCc
Q 035521 29 TTTSCSACKLQ-PSGLMYTCK--PCNFTLHVSCTQMPQ 63 (302)
Q Consensus 29 ~~~~Cd~C~~~-~~g~~Y~C~--~C~f~lH~~Ca~~P~ 63 (302)
....| .|+.. ..+..-.|. .|+..+|..|+.++.
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~ 51 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPD 51 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCC
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEcccc
Confidence 47889 79997 567889999 999999999998644
No 117
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=34.00 E-value=24 Score=25.11 Aligned_cols=26 Identities=19% Similarity=0.529 Sum_probs=20.5
Q ss_pred CccCccCCCCCCCCcEeecCCCCCCcc
Q 035521 30 TTSCSACKLQPSGLMYTCKPCNFTLHV 56 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~C~f~lH~ 56 (302)
..+|..|++.+.-..|.| .|+..+|.
T Consensus 15 ~~rC~~C~kkvgl~~f~C-rCg~~FC~ 40 (64)
T 1wfh_A 15 PNRCTVCRKRVGLTGFMC-RCGTTFCG 40 (64)
T ss_dssp CCCCTTTCCCCCTTCEEC-SSSCEECT
T ss_pred CCcChhhCCccCccCEEe-ecCCEecc
Confidence 568999999865557999 69877664
No 118
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=33.98 E-value=23 Score=25.18 Aligned_cols=26 Identities=19% Similarity=0.539 Sum_probs=20.6
Q ss_pred CccCccCCCCCCCCcEeecCCCCCCcc
Q 035521 30 TTSCSACKLQPSGLMYTCKPCNFTLHV 56 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~C~f~lH~ 56 (302)
..+|..|++.+.-..|.| .|+..+|.
T Consensus 15 ~~rC~~C~kkvgl~~f~C-rCg~~FC~ 40 (64)
T 1wg2_A 15 NNRCFSCNKKVGVMGFKC-KCGSTFCG 40 (64)
T ss_dssp SCSCTTTCCCCTTSCEEC-TTSCEECS
T ss_pred CCcChhhCCcccccCeEe-ecCCEecc
Confidence 568999999865557999 79877664
No 119
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.97 E-value=28 Score=25.34 Aligned_cols=30 Identities=27% Similarity=0.723 Sum_probs=23.1
Q ss_pred cCccCCCC-CCCCcEeecCCCCCCccccCCC
Q 035521 32 SCSACKLQ-PSGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 32 ~Cd~C~~~-~~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
.|.+|++. -.+..-.|..|+-.+|..|...
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~P 58 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLNP 58 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSSS
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccCC
Confidence 56677764 3467788999999999999873
No 120
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=31.92 E-value=47 Score=25.02 Aligned_cols=48 Identities=27% Similarity=0.682 Sum_probs=34.9
Q ss_pred CCccCccCCCCCCCCcEeecC--CC-CCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCCC
Q 035521 29 TTTSCSACKLQPSGLMYTCKP--CN-FTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGRQ 96 (302)
Q Consensus 29 ~~~~Cd~C~~~~~g~~Y~C~~--C~-f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~~ 96 (302)
....| .|++...+..-.|.. |. -.+|..|+.++.. + .+.|+|..|...
T Consensus 35 e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVgl~~~----------------p---~g~W~Cp~C~~~ 85 (91)
T 1weu_A 35 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTK----------------P---RGKWFCPRCSQE 85 (91)
T ss_dssp CCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTTCSSC----------------C---CSSCCCTTTCCC
T ss_pred CCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCCcCcC----------------C---CCCEECcCccCc
Confidence 46788 999976678888998 65 4799999974321 1 136889999754
No 121
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=31.55 E-value=12 Score=28.18 Aligned_cols=62 Identities=19% Similarity=0.315 Sum_probs=40.8
Q ss_pred CceecccCCCCCCCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCcccccccccccc
Q 035521 86 GIFNCDGCGRQGHGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKK 151 (302)
Q Consensus 86 ~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k 151 (302)
....|.+|..--.+..|.|..|.-.+|..|...+..+.... .+.+.+. . .....|.|--|..
T Consensus 14 ~D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~-a~e~~l~-A--~T~~GWSC~~Cen 75 (89)
T 1wil_A 14 NDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDS-AAEVTEM-A--HTETGWSCHYCDN 75 (89)
T ss_dssp CSCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCC-CCSCSCC-C--SSSSSCCCTTTCC
T ss_pred CCcccCccccccccceeccccccccccHhhcccccccccHH-HHHHHHc-c--CCCCCccccccch
Confidence 35689999865567789999999999999988654333221 0222121 1 1356788888864
No 122
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=31.51 E-value=48 Score=27.57 Aligned_cols=57 Identities=26% Similarity=0.655 Sum_probs=38.8
Q ss_pred CccCccCCCCCCCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCCCCC-CeeEEcC
Q 035521 30 TTSCSACKLQPSGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGRQGH-GFSYHCT 105 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~~i~-G~~Y~C~ 105 (302)
...|..|+.. |....|..|+-.+|..|...| |.- .+ .+.|.|..|...-. ...|.|.
T Consensus 4 ~~~C~~C~~~--g~ll~Cd~C~~~~H~~C~~p~------------l~~--~p---~~~W~C~~C~~~~~~~~e~dc~ 61 (184)
T 3o36_A 4 EDWCAVCQNG--GELLCCEKCPKVFHLSCHVPT------------LTN--FP---SGEWICTFCRDLSKPEVEYDCD 61 (184)
T ss_dssp CSSCTTTCCC--SSCEECSSSSCEECTTTSSSC------------CSS--CC---SSCCCCTTTSCSSSCSSCCGGG
T ss_pred CCccccCCCC--CeeeecCCCCcccCccccCCC------------CCC--CC---CCCEECccccCccccccccccc
Confidence 4569999865 557899999999999998632 221 11 35799999986532 2345554
No 123
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=31.35 E-value=29 Score=23.00 Aligned_cols=31 Identities=26% Similarity=0.413 Sum_probs=24.4
Q ss_pred ccccccccceeEEcCCCCccccccCccccCC
Q 035521 148 ICKKVGSAHWLYRCSLCEFDAHLDCAANLLA 178 (302)
Q Consensus 148 vC~k~~~~~~~YrC~~C~f~lH~~Ca~~~~~ 178 (302)
+|++....+..-.|..|+.-+|.+|+.+...
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~ 38 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIRKS 38 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCCGG
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCCcc
Confidence 6877644447789999999999999987553
No 124
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=30.91 E-value=20 Score=25.27 Aligned_cols=35 Identities=23% Similarity=0.507 Sum_probs=27.5
Q ss_pred CCccCccCCCCCC--CCcEeec-CCCCCCccccCCCCc
Q 035521 29 TTTSCSACKLQPS--GLMYTCK-PCNFTLHVSCTQMPQ 63 (302)
Q Consensus 29 ~~~~Cd~C~~~~~--g~~Y~C~-~C~f~lH~~Ca~~P~ 63 (302)
....|-.|.+++. ...-.|. .|+--+|..|..+.+
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~ 44 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTE 44 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCH
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccCCCH
Confidence 3678999999864 3567999 999999999998654
No 125
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=30.81 E-value=43 Score=23.43 Aligned_cols=36 Identities=22% Similarity=0.486 Sum_probs=27.0
Q ss_pred ccccccccccccccceeEEcC--CCCccccccCccccCC
Q 035521 142 EGFSCDICKKVGSAHWLYRCS--LCEFDAHLDCAANLLA 178 (302)
Q Consensus 142 ~~~~C~vC~k~~~~~~~YrC~--~C~f~lH~~Ca~~~~~ 178 (302)
....| +|++....+..-.|. .|+...|..|+.+...
T Consensus 9 ~~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~ 46 (68)
T 2rsd_A 9 AKVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDK 46 (68)
T ss_dssp CEECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSS
T ss_pred CCEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcc
Confidence 44667 798764456678897 5999999999977544
No 126
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=30.28 E-value=24 Score=27.09 Aligned_cols=79 Identities=18% Similarity=0.332 Sum_probs=42.1
Q ss_pred ccCccCCCCCCCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccC---CC-----CCCCeeE
Q 035521 31 TSCSACKLQPSGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGC---GR-----QGHGFSY 102 (302)
Q Consensus 31 ~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C---~~-----~i~G~~Y 102 (302)
..|.+|.+. .|..|++-+|..|+..|....-.. .......... .....|..| .. .......
T Consensus 8 ~~C~~C~~~------~C~~C~~c~~~~~~~~~~~~~~~c----~~~~~~~~~~-~~~~~c~~c~~c~~c~~~~~~~~~m~ 76 (117)
T 4bbq_A 8 RKCKACVQG------ECGVCHYCRDMKKFGGPGRMKQSC----VLRQCLAPRL-PHSVTCSLCGEVDQNEETQDFEKKLM 76 (117)
T ss_dssp SCSHHHHSC------CCSCSHHHHHSGGGTSCCCSCCCC----GGGCCSSCBC-CTTCBCTTTCCBCCHHHHCCGGGSCE
T ss_pred CcCcCcCCc------CCCCCCCCcCCcccCCCCccccch----hheeeccccc-cccccccccCcccccccccccCcceE
Confidence 457777654 288999888888876542211110 0000000000 011223333 22 1223457
Q ss_pred EcCCCCccccccccCCCc
Q 035521 103 HCTHCDFDLHILCATKPL 120 (302)
Q Consensus 103 ~C~~CdfdlH~~Ca~lP~ 120 (302)
.|..|+-.+|..|..++.
T Consensus 77 ~C~~C~~~~H~~C~~~~~ 94 (117)
T 4bbq_A 77 ECCICNEIVHPGCLQMDG 94 (117)
T ss_dssp EETTTCCEECGGGCCSCC
T ss_pred EeeecCCeEECCCCCCCc
Confidence 899999999999998653
No 127
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=30.01 E-value=26 Score=24.94 Aligned_cols=29 Identities=21% Similarity=0.684 Sum_probs=21.9
Q ss_pred CccCCCCC-CCCcEeecCCCCCCccccCCC
Q 035521 33 CSACKLQP-SGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 33 Cd~C~~~~-~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
|..|++.. .+..-.|..|+-.+|..|...
T Consensus 21 C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~P 50 (70)
T 3asl_A 21 CHLCGGRQDPDKQLMCDECDMAFHIYCLDP 50 (70)
T ss_dssp BTTTCCCSCGGGEEECTTTCCEEEGGGSSS
T ss_pred CcCCCCcCCCCCEEEcCCCCCceecccCCC
Confidence 44556542 456789999999999999973
No 128
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=29.94 E-value=26 Score=24.92 Aligned_cols=27 Identities=15% Similarity=0.404 Sum_probs=21.2
Q ss_pred ceecccCCCCCCCeeEEcCCCCcccccc
Q 035521 87 IFNCDGCGRQGHGFSYHCTHCDFDLHIL 114 (302)
Q Consensus 87 ~~~C~~C~~~i~G~~Y~C~~CdfdlH~~ 114 (302)
...|..|++.+.-..|.| .|+-.+|..
T Consensus 15 ~~rC~~C~kkvgl~~f~C-rCg~~FC~~ 41 (64)
T 1wg2_A 15 NNRCFSCNKKVGVMGFKC-KCGSTFCGS 41 (64)
T ss_dssp SCSCTTTCCCCTTSCEEC-TTSCEECSS
T ss_pred CCcChhhCCcccccCeEe-ecCCEeccc
Confidence 568999999864457999 798877754
No 129
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=29.90 E-value=42 Score=24.52 Aligned_cols=28 Identities=14% Similarity=0.381 Sum_probs=21.9
Q ss_pred CceecccCCCCCCCeeEEcCCCCcccccc
Q 035521 86 GIFNCDGCGRQGHGFSYHCTHCDFDLHIL 114 (302)
Q Consensus 86 ~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~ 114 (302)
....|..|++.+.-..|.| .|+..+|..
T Consensus 24 ~~~RC~~C~kkvgL~~f~C-rCg~~FCs~ 51 (74)
T 1wfp_A 24 TATRCLSCNKKVGVTGFKC-RCGSTFCGT 51 (74)
T ss_dssp CCCBCSSSCCBCTTTCEEC-TTSCEECTT
T ss_pred cCccchhhcCcccccceEe-ccCCEeccc
Confidence 3578999998875557999 698877754
No 130
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=29.59 E-value=22 Score=29.37 Aligned_cols=47 Identities=19% Similarity=0.454 Sum_probs=0.0
Q ss_pred CceecccCCCC---CCCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCcccccccccccc
Q 035521 86 GIFNCDGCGRQ---GHGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKK 151 (302)
Q Consensus 86 ~~~~C~~C~~~---i~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k 151 (302)
+...|..|..+ +.+..-.|..|...+|..|...... ...|.|.+|.+
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~~~~-------------------~~~W~C~vC~k 116 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHAHPE-------------------EQGWLCDPCHL 116 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEECCSS-------------------SSSCEEHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccccccCC-------------------CCcEeeHHHHH
No 131
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=29.49 E-value=18 Score=26.46 Aligned_cols=26 Identities=15% Similarity=0.457 Sum_probs=20.0
Q ss_pred CccCccCCCCCCCCcEeecCCCCCCcc
Q 035521 30 TTSCSACKLQPSGLMYTCKPCNFTLHV 56 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~C~f~lH~ 56 (302)
.-+|..|++.+.-..|.|. |+..+|.
T Consensus 25 ~nRC~~CrKkvgL~gf~Cr-Cg~~FCs 50 (74)
T 1wfl_A 25 KNRCFMCRKKVGLTGFDCR-CGNLFCG 50 (74)
T ss_dssp TTBCSSSCCBCGGGCEECT-TSCEECS
T ss_pred CCcChhhCCcccccCeecC-CCCEech
Confidence 5589999998655679998 9865543
No 132
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=29.00 E-value=18 Score=29.87 Aligned_cols=35 Identities=26% Similarity=0.551 Sum_probs=26.6
Q ss_pred cccccccccccccc-cceeEEcCCCCccccccCcccc
Q 035521 141 TEGFSCDICKKVGS-AHWLYRCSLCEFDAHLDCAANL 176 (302)
Q Consensus 141 ~~~~~C~vC~k~~~-~~~~YrC~~C~f~lH~~Ca~~~ 176 (302)
.....| +|++... .+..-.|..|+-.+|..|+...
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~ 41 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGIL 41 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCC
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCc
Confidence 445789 9998632 3457789999999999999764
No 133
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=28.66 E-value=25 Score=24.57 Aligned_cols=31 Identities=19% Similarity=0.396 Sum_probs=19.9
Q ss_pred cccccccccccccceeEEcCCCCccccc-cCc
Q 035521 143 GFSCDICKKVGSAHWLYRCSLCEFDAHL-DCA 173 (302)
Q Consensus 143 ~~~C~vC~k~~~~~~~YrC~~C~f~lH~-~Ca 173 (302)
...|.+|.+.......|+|..|+.-.|. .|.
T Consensus 11 ~~~C~vC~~~~~~~akY~CPrC~~rYCSl~C~ 42 (59)
T 1x4s_A 11 AGPCGFCPAGEVQPARYTCPRCNAPYCSLRCY 42 (59)
T ss_dssp CEEECSSCTTCCEEECEECTTTCCEESSHHHH
T ss_pred CCcCcCCCCCcCCCccccCcCCCCCccChHHH
Confidence 4589999852213468999999754443 444
No 134
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=28.64 E-value=27 Score=23.99 Aligned_cols=31 Identities=29% Similarity=0.735 Sum_probs=25.4
Q ss_pred CccCccCCCCCCCCcEeecC--CCC-CCccccCCC
Q 035521 30 TTSCSACKLQPSGLMYTCKP--CNF-TLHVSCTQM 61 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~--C~f-~lH~~Ca~~ 61 (302)
...| .|+++..|..-.|.. |.. -+|..|..+
T Consensus 9 ~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl 42 (59)
T 3c6w_A 9 PTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDL 42 (59)
T ss_dssp CEET-TTTEECCSEEEECSCTTCSSCEEETGGGTC
T ss_pred CcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCCc
Confidence 6788 899876678889999 664 899999974
No 135
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=28.54 E-value=47 Score=24.92 Aligned_cols=26 Identities=15% Similarity=0.505 Sum_probs=20.0
Q ss_pred CccCccCCCCCCC-CcEeecCCCCCCcc
Q 035521 30 TTSCSACKLQPSG-LMYTCKPCNFTLHV 56 (302)
Q Consensus 30 ~~~Cd~C~~~~~g-~~Y~C~~C~f~lH~ 56 (302)
.-+|..|++.+.- ..|.|. |+..+|.
T Consensus 25 ~~rC~~C~kkvgl~~~f~Cr-Cg~~FC~ 51 (85)
T 1wff_A 25 MKHCFLCGKKTGLATSFECR-CGNNFCA 51 (85)
T ss_dssp CCBCSSSCCBCSSSSCEECT-TCCEECT
T ss_pred CccchhhCCeecccCCeEcC-CCCEecc
Confidence 5789999998543 379996 9877665
No 136
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=28.44 E-value=28 Score=29.63 Aligned_cols=32 Identities=22% Similarity=0.567 Sum_probs=25.8
Q ss_pred ccCccCCCCCCC-----CcEeecCCCCCCccccCCCC
Q 035521 31 TSCSACKLQPSG-----LMYTCKPCNFTLHVSCTQMP 62 (302)
Q Consensus 31 ~~Cd~C~~~~~g-----~~Y~C~~C~f~lH~~Ca~~P 62 (302)
..|-.|++++.. ..-.|..|+..+|..|....
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~ 39 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLS 39 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccC
Confidence 469999987532 36799999999999999854
No 137
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=27.65 E-value=17 Score=32.14 Aligned_cols=34 Identities=26% Similarity=0.541 Sum_probs=28.0
Q ss_pred cccccccccccccceeEEcCCCCccccccCccccCC
Q 035521 143 GFSCDICKKVGSAHWLYRCSLCEFDAHLDCAANLLA 178 (302)
Q Consensus 143 ~~~C~vC~k~~~~~~~YrC~~C~f~lH~~Ca~~~~~ 178 (302)
-..|.+|.+... +..+|..|+..+|..|+..-.+
T Consensus 180 i~~C~iC~~iv~--~g~~C~~C~~~~H~~C~~~~~~ 213 (238)
T 3nw0_A 180 VKICNICHSLLI--QGQSCETCGIRMHLPCVAKYFQ 213 (238)
T ss_dssp CCBCTTTCSBCS--SCEECSSSCCEECHHHHHHHTT
T ss_pred CCcCcchhhHHh--CCcccCccChHHHHHHHHHHHH
Confidence 457999998754 5689999999999999977544
No 138
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=27.59 E-value=28 Score=25.47 Aligned_cols=27 Identities=19% Similarity=0.296 Sum_probs=20.8
Q ss_pred ceecccCCCCCCCeeEEcCCCCcccccc
Q 035521 87 IFNCDGCGRQGHGFSYHCTHCDFDLHIL 114 (302)
Q Consensus 87 ~~~C~~C~~~i~G~~Y~C~~CdfdlH~~ 114 (302)
...|..|++.+.-..|.|. |+..+|..
T Consensus 25 ~nRC~~CrKkvgL~gf~Cr-Cg~~FCs~ 51 (74)
T 1wfl_A 25 KNRCFMCRKKVGLTGFDCR-CGNLFCGL 51 (74)
T ss_dssp TTBCSSSCCBCGGGCEECT-TSCEECSS
T ss_pred CCcChhhCCcccccCeecC-CCCEechh
Confidence 4589999998755579999 98766643
No 139
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=27.44 E-value=28 Score=24.17 Aligned_cols=32 Identities=28% Similarity=0.533 Sum_probs=25.7
Q ss_pred CCccCccCCCCCCCCcEeecCCC---CCCccccCCC
Q 035521 29 TTTSCSACKLQPSGLMYTCKPCN---FTLHVSCTQM 61 (302)
Q Consensus 29 ~~~~Cd~C~~~~~g~~Y~C~~C~---f~lH~~Ca~~ 61 (302)
+...| .|+.+..+..-.|..|+ --+|..|+.+
T Consensus 10 e~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl 44 (62)
T 2g6q_A 10 EPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSL 44 (62)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTC
T ss_pred CCcEE-ECCCCCCCCeeeeeCCCCCcccEecccCCc
Confidence 36788 89987667788999855 6899999974
No 140
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=27.42 E-value=39 Score=25.11 Aligned_cols=32 Identities=16% Similarity=0.495 Sum_probs=26.8
Q ss_pred CccCccCCCCC--CCCcEeecCCCCCCccccCCC
Q 035521 30 TTSCSACKLQP--SGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 30 ~~~Cd~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
...|..|..++ ..-.++|..|+..++..|...
T Consensus 20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~ 53 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNR 53 (90)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred CCcCcCCCCcccchhhCccccCCCCEECCcccCC
Confidence 45799999875 345699999999999999974
No 141
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=27.31 E-value=52 Score=27.75 Aligned_cols=47 Identities=30% Similarity=0.724 Sum_probs=33.3
Q ss_pred ccCccCCCCCCCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCCC
Q 035521 31 TSCSACKLQPSGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGRQ 96 (302)
Q Consensus 31 ~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~~ 96 (302)
-.|..|+.. |..-.|..|+-.+|..|...| |.-+ + .+.|.|..|...
T Consensus 3 ~~C~~C~~~--g~ll~Cd~C~~~~H~~Cl~p~------------l~~~--p---~g~W~C~~C~~~ 49 (189)
T 2ro1_A 3 TICRVCQKP--GDLVMCNQCEFCFHLDCHLPA------------LQDV--P---GEEWSCSLCHVL 49 (189)
T ss_dssp CCBTTTCCC--SSCCCCTTTCCBCCSTTSTTC------------CSSC--C---CTTCCTTTTSCS
T ss_pred CcCccCCCC--CceeECCCCCchhccccCCCC------------cccC--C---CCCCCCcCccCC
Confidence 469999865 456779999999999998632 2211 1 357899999754
No 142
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=27.14 E-value=45 Score=23.73 Aligned_cols=48 Identities=27% Similarity=0.716 Sum_probs=34.8
Q ss_pred CCccCccCCCCCCCCcEeecC--CCC-CCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCCC
Q 035521 29 TTTSCSACKLQPSGLMYTCKP--CNF-TLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGRQ 96 (302)
Q Consensus 29 ~~~~Cd~C~~~~~g~~Y~C~~--C~f-~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~~ 96 (302)
....| .|+....+..-.|.. |.+ .+|..|+.+... + .+.|+|..|...
T Consensus 15 ~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~~~----------------p---~g~w~Cp~C~~~ 65 (71)
T 1wen_A 15 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTK----------------P---RGKWFCPRCSQE 65 (71)
T ss_dssp SCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTCSSC----------------C---SSCCCCTTTSSC
T ss_pred CCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCCcCcC----------------C---CCCEECCCCCcc
Confidence 36788 699876688889998 764 899999974221 1 136889999754
No 143
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=27.00 E-value=29 Score=25.74 Aligned_cols=36 Identities=19% Similarity=0.505 Sum_probs=22.2
Q ss_pred ccccccccccccc-----------cc-eeEEcCCCC-------ccccccCccccC
Q 035521 142 EGFSCDICKKVGS-----------AH-WLYRCSLCE-------FDAHLDCAANLL 177 (302)
Q Consensus 142 ~~~~C~vC~k~~~-----------~~-~~YrC~~C~-------f~lH~~Ca~~~~ 177 (302)
..+.|+.|+.... ++ +.|.|.+|. +.-|..|+....
T Consensus 9 V~F~C~~Cgd~lKK~kv~~H~~~Cr~~~~~SCIDC~~~F~~~~y~~HtsCISEae 63 (79)
T 1wjv_A 9 VFFTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWGDDYKSHVKCISEGQ 63 (79)
T ss_dssp CEEEESSSCCEEETTHHHHHHHHCTTCCEEEETTTTEEEEGGGTTTCCCCCSCTT
T ss_pred eEEEcCCCCCeeecccchhHHhhCCCCCcEEecccCCeeCCCCEeCEeeeCChhh
Confidence 4578999985321 22 478888884 345677775543
No 144
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.94 E-value=39 Score=25.27 Aligned_cols=49 Identities=29% Similarity=0.667 Sum_probs=35.3
Q ss_pred ceecccCCCCC-CCeeEEcCCCCccccccccCCCcceecccccccceEeecCCCcccccccccccc
Q 035521 87 IFNCDGCGRQG-HGFSYHCTHCDFDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDICKK 151 (302)
Q Consensus 87 ~~~C~~C~~~i-~G~~Y~C~~CdfdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~vC~k 151 (302)
...|.+|++.. .+....|..|+-.+|..|...|.. ..| ...|.|..|..
T Consensus 16 ~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~--------------~~P--~g~W~C~~C~~ 65 (92)
T 2e6r_A 16 SYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLP--------------EIP--RGIWRCPKCIL 65 (92)
T ss_dssp CCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCS--------------SCC--SSCCCCHHHHH
T ss_pred CCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcc--------------cCC--CCCcCCccCcC
Confidence 56899999764 346789999999999999974321 111 34688888864
No 145
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.63 E-value=45 Score=24.33 Aligned_cols=32 Identities=16% Similarity=0.456 Sum_probs=26.8
Q ss_pred CccCccCCCCC--CCCcEeecCCCCCCccccCCC
Q 035521 30 TTSCSACKLQP--SGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 30 ~~~Cd~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
...|..|..+. ..-+.+|..|+..++..|...
T Consensus 14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 47 (84)
T 1x4u_A 14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSF 47 (84)
T ss_dssp CSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCE
T ss_pred CCcCcCcCCccccchhhhhhcCCCcEEChhhcCC
Confidence 56899999975 345699999999999999863
No 146
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=26.59 E-value=41 Score=24.45 Aligned_cols=31 Identities=23% Similarity=0.595 Sum_probs=26.6
Q ss_pred CccCccCCCCC--CCCcEeecCCCCCCccccCC
Q 035521 30 TTSCSACKLQP--SGLMYTCKPCNFTLHVSCTQ 60 (302)
Q Consensus 30 ~~~Cd~C~~~~--~g~~Y~C~~C~f~lH~~Ca~ 60 (302)
...|..|..+. ..-+.+|..|+..++..|..
T Consensus 19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~ 51 (82)
T 2yw8_A 19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSS 51 (82)
T ss_dssp CCBCTTTCCBCBTTBCCEECTTTCCEECSGGGC
T ss_pred CCcccCcCCcccCccccccCCCCCCEEChHHhC
Confidence 56899999975 34569999999999999997
No 147
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=26.57 E-value=47 Score=24.26 Aligned_cols=32 Identities=19% Similarity=0.558 Sum_probs=27.1
Q ss_pred CccCccCCCCC--CCCcEeecCCCCCCccccCCC
Q 035521 30 TTSCSACKLQP--SGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 30 ~~~Cd~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
...|..|..+. ..-+.+|..|+-.++.+|...
T Consensus 21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 54 (84)
T 1z2q_A 21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRH 54 (84)
T ss_dssp CCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCC
T ss_pred CCCCcCcCCccccchhcccccCCCcEEChHHhCC
Confidence 56899999975 346799999999999999974
No 148
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=26.14 E-value=27 Score=30.76 Aligned_cols=32 Identities=22% Similarity=0.546 Sum_probs=26.9
Q ss_pred CceecccCCCCCCCeeEEcCCCCccccccccCC
Q 035521 86 GIFNCDGCGRQGHGFSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 86 ~~~~C~~C~~~i~G~~Y~C~~CdfdlH~~Ca~l 118 (302)
....|.+|.+.+. ...+|..|+..+|..|...
T Consensus 179 ~i~~C~iC~~iv~-~g~~C~~C~~~~H~~C~~~ 210 (238)
T 3nw0_A 179 AVKICNICHSLLI-QGQSCETCGIRMHLPCVAK 210 (238)
T ss_dssp TCCBCTTTCSBCS-SCEECSSSCCEECHHHHHH
T ss_pred CCCcCcchhhHHh-CCcccCccChHHHHHHHHH
Confidence 4678999999764 5799999999999999864
No 149
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.08 E-value=38 Score=24.10 Aligned_cols=32 Identities=22% Similarity=0.480 Sum_probs=25.6
Q ss_pred CccCccCCCCCCCCcEeecCCC---CCCccccCCCC
Q 035521 30 TTSCSACKLQPSGLMYTCKPCN---FTLHVSCTQMP 62 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~C~---f~lH~~Ca~~P 62 (302)
...|. |.....+..-.|+.|| -.+|..|+.+.
T Consensus 6 ~~yC~-C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl~ 40 (70)
T 1x4i_A 6 SGYCI-CNQVSYGEMVGCDNQDCPIEWFHYGCVGLT 40 (70)
T ss_dssp CCCST-TSCCCCSSEECCSCTTCSCCCEEHHHHTCS
T ss_pred CeEEE-cCCCCCCCEeEeCCCCCCccCCcccccccC
Confidence 56785 8887677888999876 68999999853
No 150
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=26.00 E-value=33 Score=29.15 Aligned_cols=33 Identities=21% Similarity=0.466 Sum_probs=25.3
Q ss_pred ccccccccccc----cceeEEcCCCCccccccCcccc
Q 035521 144 FSCDICKKVGS----AHWLYRCSLCEFDAHLDCAANL 176 (302)
Q Consensus 144 ~~C~vC~k~~~----~~~~YrC~~C~f~lH~~Ca~~~ 176 (302)
..|.+|++.-. ....-.|..|+..+|.+|+...
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~ 39 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLS 39 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccC
Confidence 46999988522 1236789999999999999764
No 151
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=24.55 E-value=44 Score=23.73 Aligned_cols=30 Identities=13% Similarity=0.345 Sum_probs=25.7
Q ss_pred ccCccCCCCC--CCCcEeecCCCCCCccccCC
Q 035521 31 TSCSACKLQP--SGLMYTCKPCNFTLHVSCTQ 60 (302)
Q Consensus 31 ~~Cd~C~~~~--~g~~Y~C~~C~f~lH~~Ca~ 60 (302)
..|..|..+. ..-+++|..|+..++.+|..
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~ 43 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSS 43 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSC
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccccC
Confidence 4799999875 34579999999999999996
No 152
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=24.42 E-value=53 Score=25.14 Aligned_cols=34 Identities=18% Similarity=0.455 Sum_probs=27.8
Q ss_pred ceecccCCCCC--CCeeEEcC-CCCccccccccCCCc
Q 035521 87 IFNCDGCGRQG--HGFSYHCT-HCDFDLHILCATKPL 120 (302)
Q Consensus 87 ~~~C~~C~~~i--~G~~Y~C~-~CdfdlH~~Ca~lP~ 120 (302)
.+.|..|+++. .+....|. .|+-=+|..|..+..
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~ 39 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTE 39 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCH
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCH
Confidence 56899999874 45678898 998779999998764
No 153
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=24.02 E-value=16 Score=30.07 Aligned_cols=13 Identities=15% Similarity=0.468 Sum_probs=9.8
Q ss_pred CccCccCCCCCCC
Q 035521 30 TTSCSACKLQPSG 42 (302)
Q Consensus 30 ~~~Cd~C~~~~~g 42 (302)
...|..|+++|.+
T Consensus 6 ~~~C~~C~~~I~~ 18 (169)
T 2rgt_A 6 IPMCAGCDQHILD 18 (169)
T ss_dssp -CBBSSSSSBCCS
T ss_pred CCccccCCCccCC
Confidence 4579999998765
No 154
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.97 E-value=1.8e+02 Score=20.08 Aligned_cols=13 Identities=31% Similarity=0.611 Sum_probs=8.0
Q ss_pred ceecccCCCCCCC
Q 035521 87 IFNCDGCGRQGHG 99 (302)
Q Consensus 87 ~~~C~~C~~~i~G 99 (302)
=+.|..|++.+.+
T Consensus 43 CF~C~~C~~~L~~ 55 (82)
T 2ehe_A 43 CFRCCRCQRSLAD 55 (82)
T ss_dssp TSBCTTTCCBCSS
T ss_pred CCeecCCCCccCC
Confidence 3567777766543
No 155
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=23.47 E-value=60 Score=27.58 Aligned_cols=59 Identities=25% Similarity=0.645 Sum_probs=39.4
Q ss_pred CccCccCCCCCCCCcEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCCCCC-CeeEEcCCC
Q 035521 30 TTSCSACKLQPSGLMYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGRQGH-GFSYHCTHC 107 (302)
Q Consensus 30 ~~~Cd~C~~~~~g~~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~~i~-G~~Y~C~~C 107 (302)
...|..|+.. |..-.|..|+-.+|..|...| |.-+ | .+.|.|..|..... ...|.|..+
T Consensus 7 ~~~C~~C~~~--g~ll~Cd~C~~~~H~~Cl~p~------------l~~~--p---~~~W~C~~C~~~~~~~~~~~c~~~ 66 (207)
T 3u5n_A 7 EDWCAVCQNG--GDLLCCEKCPKVFHLTCHVPT------------LLSF--P---SGDWICTFCRDIGKPEVEYDCDNL 66 (207)
T ss_dssp CSSBTTTCCC--EEEEECSSSSCEECTTTSSSC------------CSSC--C---SSCCCCTTTSCSSSCSSCCSCC--
T ss_pred CCCCCCCCCC--CceEEcCCCCCccCCccCCCC------------CCCC--C---CCCEEeCceeCccccccccccccc
Confidence 4569999864 457889999999999998632 2211 1 35799999987543 234666533
No 156
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=23.35 E-value=66 Score=23.81 Aligned_cols=37 Identities=16% Similarity=0.132 Sum_probs=27.9
Q ss_pred cccccccccccccc-cceeEEcCCCCccccccCccccC
Q 035521 141 TEGFSCDICKKVGS-AHWLYRCSLCEFDAHLDCAANLL 177 (302)
Q Consensus 141 ~~~~~C~vC~k~~~-~~~~YrC~~C~f~lH~~Ca~~~~ 177 (302)
.....|.+|++.-. ....++|..|+-.+|.+|.....
T Consensus 7 ~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~ 44 (88)
T 1wfk_A 7 GMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSA 44 (88)
T ss_dssp CCCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEE
T ss_pred CcCCCCcCcCCcccCccccccCCCCCCEEChhHcCCce
Confidence 34457999998532 23579999999999999987643
No 157
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=23.21 E-value=62 Score=23.55 Aligned_cols=34 Identities=26% Similarity=0.531 Sum_probs=27.8
Q ss_pred CceecccCCCCCC--CeeEEcCCCCccccccccCCC
Q 035521 86 GIFNCDGCGRQGH--GFSYHCTHCDFDLHILCATKP 119 (302)
Q Consensus 86 ~~~~C~~C~~~i~--G~~Y~C~~CdfdlH~~Ca~lP 119 (302)
....|..|.+... .-..+|..|+..++..|....
T Consensus 20 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 55 (84)
T 1z2q_A 20 DAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHR 55 (84)
T ss_dssp TCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCE
T ss_pred CCCCCcCcCCccccchhcccccCCCcEEChHHhCCe
Confidence 4568999998753 346999999999999998753
No 158
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=22.57 E-value=56 Score=22.31 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=25.5
Q ss_pred CceecccCCCCCCCeeEEcCC--CC-ccccccccCCC
Q 035521 86 GIFNCDGCGRQGHGFSYHCTH--CD-FDLHILCATKP 119 (302)
Q Consensus 86 ~~~~C~~C~~~i~G~~Y~C~~--Cd-fdlH~~Ca~lP 119 (302)
....| .|++.-.|..-.|.. |. --+|..|..+.
T Consensus 9 e~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl~ 44 (60)
T 2vnf_A 9 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLT 44 (60)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCS
T ss_pred CCCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCCCC
Confidence 46788 899866678889998 44 46999999864
No 159
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=22.00 E-value=60 Score=24.04 Aligned_cols=32 Identities=22% Similarity=0.569 Sum_probs=26.9
Q ss_pred CccCccCCCCC--CCCcEeecCCCCCCccccCCC
Q 035521 30 TTSCSACKLQP--SGLMYTCKPCNFTLHVSCTQM 61 (302)
Q Consensus 30 ~~~Cd~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~ 61 (302)
...|..|..++ ..-+.+|..|+..++..|...
T Consensus 9 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 42 (88)
T 1wfk_A 9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSF 42 (88)
T ss_dssp CSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCE
T ss_pred CCCCcCcCCcccCccccccCCCCCCEEChhHcCC
Confidence 56799999975 345799999999999999973
No 160
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=21.46 E-value=68 Score=23.23 Aligned_cols=33 Identities=18% Similarity=0.493 Sum_probs=27.2
Q ss_pred CceecccCCCCCC--CeeEEcCCCCccccccccCC
Q 035521 86 GIFNCDGCGRQGH--GFSYHCTHCDFDLHILCATK 118 (302)
Q Consensus 86 ~~~~C~~C~~~i~--G~~Y~C~~CdfdlH~~Ca~l 118 (302)
....|..|..... .-..+|..|+..++..|...
T Consensus 18 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 52 (82)
T 2yw8_A 18 EATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSN 52 (82)
T ss_dssp CCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCE
T ss_pred cCCcccCcCCcccCccccccCCCCCCEEChHHhCC
Confidence 3568999998763 34699999999999999875
No 161
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=21.38 E-value=70 Score=22.42 Aligned_cols=37 Identities=22% Similarity=0.490 Sum_probs=28.4
Q ss_pred ccccccccccccc-ccceeEEcCCCCccccccCccccC
Q 035521 141 TEGFSCDICKKVG-SAHWLYRCSLCEFDAHLDCAANLL 177 (302)
Q Consensus 141 ~~~~~C~vC~k~~-~~~~~YrC~~C~f~lH~~Ca~~~~ 177 (302)
.....|.+|.|.- ..+....|..|+.-+|.+|-....
T Consensus 7 ~d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~ 44 (62)
T 2a20_A 7 GDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVS 44 (62)
T ss_dssp SCCCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEE
T ss_pred CCcchhhhhccceeccCCCccccccCCeeecccCCEee
Confidence 3456899999752 245678999999999999986643
No 162
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=21.24 E-value=70 Score=24.00 Aligned_cols=48 Identities=21% Similarity=0.359 Sum_probs=34.3
Q ss_pred CCceecccCCCCCCCeeEEcCCCC---ccccccccCCCcceecccccccceEeecCCCccccccccc-ccc
Q 035521 85 AGIFNCDGCGRQGHGFSYHCTHCD---FDLHILCATKPLTLIHQSHPHQLQLTFDPPYYTEGFSCDI-CKK 151 (302)
Q Consensus 85 ~~~~~C~~C~~~i~G~~Y~C~~Cd---fdlH~~Ca~lP~~i~h~~H~H~L~L~~~~~~~~~~~~C~v-C~k 151 (302)
....+| .|++.-.+..-.|..|+ --+|..|..+... + ...|.|.. |.+
T Consensus 24 ~~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~~~---------------p---~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 24 QEEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGLKQA---------------P---KGKWYCSKDCKE 75 (90)
T ss_dssp CCSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSCSSC---------------T---TSCCCSSHHHHH
T ss_pred CCCcEE-EeCCCCCCCEEEecCCCCccccCcCccCCCCcC---------------C---CCCccCChhhcc
Confidence 346789 89986667777899866 5689999976421 1 24688999 875
No 163
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=20.94 E-value=32 Score=28.31 Aligned_cols=33 Identities=27% Similarity=0.544 Sum_probs=27.3
Q ss_pred CCccCccCCCCC--CCCcEeecCCCCCCccccCCCC
Q 035521 29 TTTSCSACKLQP--SGLMYTCKPCNFTLHVSCTQMP 62 (302)
Q Consensus 29 ~~~~Cd~C~~~~--~g~~Y~C~~C~f~lH~~Ca~~P 62 (302)
....| .|+.+. .+..-.|..|+-.+|..|...+
T Consensus 7 ~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~ 41 (174)
T 2ri7_A 7 TKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGIL 41 (174)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCC
T ss_pred CCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCc
Confidence 36789 999864 4667999999999999999753
No 164
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=20.77 E-value=1.6e+02 Score=19.63 Aligned_cols=43 Identities=19% Similarity=0.531 Sum_probs=25.3
Q ss_pred cEeecCCCCCCccccCCCCceecCCCCCCCccccccCCCCCCCceecccCCCC
Q 035521 44 MYTCKPCNFTLHVSCTQMPQLITHPSHPAHSLSLVPTPIYPAGIFNCDGCGRQ 96 (302)
Q Consensus 44 ~Y~C~~C~f~lH~~Ca~~P~~i~Hp~Hp~H~L~L~~~~~~~~~~~~C~~C~~~ 96 (302)
.|+|..|+|.....=-+ -...+-|+-+|.-++ ..+.|-.|+..
T Consensus 3 ~y~C~~CGyvYd~~~Gd----p~~gi~pGt~f~~lP------~dw~CP~Cg~~ 45 (52)
T 1e8j_A 3 IYVCTVCGYEYDPAKGD----PDSGIKPGTKFEDLP------DDWACPVCGAS 45 (52)
T ss_dssp CEECSSSCCCCCTTTCC----TTTTCCSSCCTTSSC------TTCCCSSSCCC
T ss_pred cEEeCCCCeEEcCCcCC----cccCcCCCCchHHCC------CCCcCCCCCCc
Confidence 59999999876542221 122333445555432 36889999864
No 165
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=20.11 E-value=63 Score=23.43 Aligned_cols=30 Identities=33% Similarity=0.871 Sum_probs=19.7
Q ss_pred cccCCCCC-CCeeEEcCCCCccccccccCCC
Q 035521 90 CDGCGRQG-HGFSYHCTHCDFDLHILCATKP 119 (302)
Q Consensus 90 C~~C~~~i-~G~~Y~C~~CdfdlH~~Ca~lP 119 (302)
|.+|++.. .+....|..|+-.+|..|..-|
T Consensus 29 C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~Pp 59 (77)
T 3shb_A 29 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPP 59 (77)
T ss_dssp BTTTCCCSCGGGEEECTTTCCEEETTTSSSC
T ss_pred CCccCCCCCCcceeEeCCCCCccCcccCCCc
Confidence 44444432 2456788888888999998743
Done!