BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035523
         (125 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6B4J5|EXSA_BACCE Spore coat assembly protein ExsA OS=Bacillus cereus GN=exsA PE=2
           SV=1
          Length = 643

 Score = 32.3 bits (72), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 77  EIYVVGEGETLHTISDKCGDPF--IVEHNPHIHDPDDLFPGLVIKITA 122
           +I++V +G+TL  I+ K G  F  + + N  + +PD + PG+ IK+ +
Sbjct: 2   KIHIVQKGDTLWKIAKKYGVDFDTLKKTNTQLSNPDLIMPGMKIKVPS 49


>sp|Q7MWN8|Y562_PORGI Uncharacterized transporter PG_0562 OS=Porphyromonas gingivalis
           (strain ATCC BAA-308 / W83) GN=PG_0562 PE=3 SV=1
          Length = 558

 Score = 30.0 bits (66), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)

Query: 76  DEIYVVGEGETLHTISDKCGDPFIVEHNPHIHDPDDLFPGLVI 118
           D + VVGEG+ +  +++  GD      NPH+     LF GLV+
Sbjct: 350 DRLTVVGEGKAVERVAEILGDEVKQLDNPHL---TTLFGGLVL 389


>sp|Q55G75|Y7786_DICDI PH domain-containing protein DDB_G0267786 OS=Dictyostelium
           discoideum GN=DDB_G0267786 PE=4 SV=1
          Length = 528

 Score = 29.3 bits (64), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 97  PFIVEHNPHIHDPDDLFPGLVIKITA 122
           P+++E  P  HD  D+F G ++K+ A
Sbjct: 46  PYLLEPRPRDHDKSDVFSGYLVKLGA 71


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.136    0.410 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,556,633
Number of Sequences: 539616
Number of extensions: 1857781
Number of successful extensions: 4062
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 4058
Number of HSP's gapped (non-prelim): 11
length of query: 125
length of database: 191,569,459
effective HSP length: 92
effective length of query: 33
effective length of database: 141,924,787
effective search space: 4683517971
effective search space used: 4683517971
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)