Query 035526
Match_columns 557
No_of_seqs 423 out of 2854
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 05:33:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035526.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035526hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 2.2E-39 7.4E-44 330.6 31.8 272 188-542 22-302 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 2E-39 6.7E-44 329.3 31.2 270 189-544 14-294 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 3.7E-39 1.3E-43 327.9 32.3 268 189-544 10-289 (306)
4 2vpj_A Kelch-like protein 12; 100.0 1.1E-38 3.6E-43 323.5 31.2 269 189-543 13-294 (301)
5 4asc_A Kelch repeat and BTB do 100.0 4.3E-37 1.5E-41 314.3 31.9 268 190-539 4-289 (315)
6 2woz_A Kelch repeat and BTB do 100.0 2.1E-36 7.1E-41 309.7 28.3 281 189-554 14-312 (318)
7 2xn4_A Kelch-like protein 2; s 100.0 1.4E-34 4.7E-39 293.6 29.7 252 158-455 30-290 (302)
8 1zgk_A Kelch-like ECH-associat 100.0 7.9E-35 2.7E-39 296.8 27.5 250 157-456 38-301 (308)
9 3ii7_A Kelch-like protein 7; p 100.0 1.3E-34 4.5E-39 294.3 26.5 252 158-455 24-285 (306)
10 2uvk_A YJHT; unknown function, 100.0 9.5E-35 3.3E-39 301.8 26.0 274 190-540 19-355 (357)
11 4asc_A Kelch repeat and BTB do 100.0 9.7E-35 3.3E-39 296.9 25.3 246 158-448 13-283 (315)
12 2vpj_A Kelch-like protein 12; 100.0 1.8E-34 6E-39 292.4 26.9 249 157-455 30-291 (301)
13 2woz_A Kelch repeat and BTB do 100.0 5.8E-34 2E-38 291.5 23.1 244 160-448 26-293 (318)
14 2uvk_A YJHT; unknown function, 100.0 5.3E-31 1.8E-35 273.5 25.7 242 220-542 2-309 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 1.2E-29 4.1E-34 287.0 27.0 260 189-521 396-690 (695)
16 1k3i_A Galactose oxidase precu 100.0 3E-29 1E-33 282.1 17.2 303 160-552 168-522 (656)
17 2zwa_A Leucine carboxyl methyl 99.9 9.4E-27 3.2E-31 263.3 22.6 237 217-533 378-641 (695)
18 1k3i_A Galactose oxidase precu 99.9 7.5E-27 2.6E-31 262.5 16.1 285 159-521 220-545 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 98.1 0.0004 1.4E-08 72.7 24.5 41 137-177 16-56 (445)
20 1p22_A F-BOX/WD-repeat protein 98.0 0.00095 3.2E-08 69.7 23.8 36 140-175 11-50 (435)
21 3v7d_B Cell division control p 97.8 0.0014 4.7E-08 68.6 20.1 38 139-176 14-51 (464)
22 3dsm_A Uncharacterized protein 97.7 0.0086 2.9E-07 60.2 24.4 179 205-447 16-217 (328)
23 1fs1_A SKP2 F-BOX, cyclin A/CD 97.5 4.5E-05 1.5E-09 55.7 2.5 42 138-179 7-48 (53)
24 3mbr_X Glutamine cyclotransfer 97.2 0.055 1.9E-06 52.3 21.4 157 229-444 21-181 (243)
25 3dsm_A Uncharacterized protein 97.2 0.048 1.6E-06 54.6 21.8 192 190-445 53-256 (328)
26 2e31_A FBS1, F-box only protei 96.9 0.00028 9.5E-09 70.4 2.4 46 139-184 50-96 (297)
27 3q7m_A Lipoprotein YFGL, BAMB; 96.9 0.42 1.4E-05 48.2 26.7 259 189-532 52-344 (376)
28 3nol_A Glutamine cyclotransfer 96.6 0.14 4.6E-06 50.1 18.8 156 230-444 44-203 (262)
29 1l0q_A Surface layer protein; 96.5 0.2 7E-06 50.3 20.7 188 191-447 2-194 (391)
30 3u4y_A Uncharacterized protein 96.2 0.89 3E-05 44.3 22.8 192 190-445 9-210 (331)
31 3jrp_A Fusion protein of prote 96.1 0.41 1.4E-05 47.3 20.0 202 190-443 22-241 (379)
32 1ri6_A Putative isomerase YBHE 96.1 0.76 2.6E-05 44.7 21.3 65 376-446 142-215 (343)
33 3nok_A Glutaminyl cyclase; bet 95.9 0.37 1.3E-05 47.1 17.6 153 230-444 56-212 (268)
34 3hfq_A Uncharacterized protein 95.6 0.65 2.2E-05 45.9 18.9 63 206-282 18-80 (347)
35 2z2n_A Virginiamycin B lyase; 95.5 1.7 6E-05 41.2 20.8 187 190-444 109-297 (299)
36 3bws_A Protein LP49; two-domai 95.5 1.4 4.7E-05 44.8 21.1 198 190-446 133-338 (433)
37 3bws_A Protein LP49; two-domai 95.4 0.47 1.6E-05 48.4 17.2 180 207-445 102-295 (433)
38 2iwa_A Glutamine cyclotransfer 95.4 0.83 2.8E-05 44.6 17.9 155 231-444 23-183 (266)
39 3scy_A Hypothetical bacterial 95.4 1.5 5.1E-05 43.5 20.6 29 422-450 220-250 (361)
40 3vgz_A Uncharacterized protein 95.2 2.5 8.4E-05 41.3 24.5 207 190-454 52-274 (353)
41 1jmx_B Amine dehydrogenase; ox 94.8 2.8 9.7E-05 40.7 20.3 68 190-279 10-79 (349)
42 2hqs_A Protein TOLB; TOLB, PAL 94.7 2.3 7.8E-05 43.7 20.3 187 206-450 203-395 (415)
43 3hve_A Gigaxonin; ubiquitin, c 94.3 2E-05 6.9E-10 77.4 -18.7 136 22-169 99-252 (256)
44 3nol_A Glutamine cyclotransfer 94.3 4.2 0.00014 39.4 20.2 69 190-278 52-120 (262)
45 2xbg_A YCF48-like protein; pho 94.3 4.7 0.00016 40.0 25.6 278 160-506 17-310 (327)
46 2pm7_B Protein transport prote 94.1 4.4 0.00015 39.0 20.2 61 376-442 171-238 (297)
47 1k8k_C P40, ARP2/3 complex 41 94.1 4.3 0.00015 39.7 20.0 72 376-454 215-288 (372)
48 3jrp_A Fusion protein of prote 94.0 1.5 5.2E-05 43.0 16.6 72 376-453 222-299 (379)
49 1l0q_A Surface layer protein; 94.0 1.4 4.8E-05 44.0 16.4 187 190-445 43-236 (391)
50 1gxr_A ESG1, transducin-like e 93.9 4.7 0.00016 38.6 21.0 61 376-444 196-257 (337)
51 4ery_A WD repeat-containing pr 93.9 4.8 0.00017 38.7 24.3 64 375-444 161-225 (312)
52 1gxr_A ESG1, transducin-like e 93.7 3.8 0.00013 39.4 18.4 188 191-445 109-299 (337)
53 3jro_A Fusion protein of prote 93.6 3 0.0001 46.5 19.8 201 191-443 21-239 (753)
54 3i3n_A Kelch-like protein 11; 93.5 4.7E-05 1.6E-09 75.7 -17.9 136 21-168 106-258 (279)
55 3mbr_X Glutamine cyclotransfer 93.5 0.98 3.3E-05 43.5 13.2 102 316-444 32-135 (243)
56 1k8k_C P40, ARP2/3 complex 41 93.3 3.6 0.00012 40.3 17.7 71 190-281 19-90 (372)
57 2z2n_A Virginiamycin B lyase; 93.2 5.7 0.0002 37.4 20.1 189 190-448 25-218 (299)
58 4aez_A CDC20, WD repeat-contai 93.1 8 0.00027 38.9 24.3 178 206-446 113-297 (401)
59 3vgz_A Uncharacterized protein 93.1 6.7 0.00023 38.0 21.1 62 376-446 244-307 (353)
60 1rwi_B Serine/threonine-protei 93.0 5.8 0.0002 37.0 21.9 186 190-444 34-224 (270)
61 3v7d_B Cell division control p 92.8 9.4 0.00032 38.9 24.6 63 376-446 363-425 (464)
62 2ovr_B FBW7, F-BOX/WD repeat p 92.7 9.5 0.00033 38.8 21.3 63 376-445 330-394 (445)
63 3q7m_A Lipoprotein YFGL, BAMB; 92.7 8.7 0.0003 38.2 29.9 60 376-448 241-304 (376)
64 3bg1_A Protein SEC13 homolog; 92.6 4 0.00014 39.8 16.7 61 376-442 180-247 (316)
65 3dwl_C Actin-related protein 2 92.4 0.9 3.1E-05 45.2 11.9 69 190-279 22-92 (377)
66 2iwa_A Glutamine cyclotransfer 92.1 9.1 0.00031 37.1 21.0 186 191-442 32-237 (266)
67 3g4e_A Regucalcin; six bladed 92.1 8.9 0.0003 36.9 20.0 67 190-283 24-91 (297)
68 3ei3_B DNA damage-binding prot 91.8 10 0.00034 37.6 19.0 69 192-281 87-157 (383)
69 4a11_B DNA excision repair pro 91.6 8.5 0.00029 37.9 18.2 22 423-444 256-278 (408)
70 2pm9_A Protein WEB1, protein t 91.6 12 0.00039 37.3 21.1 62 376-443 179-250 (416)
71 3vl1_A 26S proteasome regulato 91.3 13 0.00043 37.2 24.4 63 375-444 259-324 (420)
72 3fm0_A Protein CIAO1; WDR39,SG 91.3 6.8 0.00023 38.6 16.9 60 375-440 162-223 (345)
73 2qc5_A Streptogramin B lactona 91.2 10 0.00034 35.7 21.5 188 190-447 72-264 (300)
74 2qc5_A Streptogramin B lactona 90.9 11 0.00037 35.5 20.5 189 190-448 30-223 (300)
75 1q7f_A NHL, brain tumor CG1071 90.8 11 0.00038 35.5 21.5 189 190-442 88-280 (286)
76 4g56_B MGC81050 protein; prote 90.8 5.8 0.0002 39.5 15.9 58 376-442 283-343 (357)
77 1p22_A F-BOX/WD-repeat protein 90.5 6.4 0.00022 40.1 16.3 59 376-443 307-366 (435)
78 2dg1_A DRP35, lactonase; beta 90.2 5.1 0.00018 38.9 14.6 70 190-278 55-125 (333)
79 4e54_B DNA damage-binding prot 90.0 8.5 0.00029 39.3 16.8 71 190-281 131-203 (435)
80 3l2o_B F-box only protein 4; s 90.0 0.089 3E-06 52.1 1.3 42 140-181 5-46 (312)
81 1q7f_A NHL, brain tumor CG1071 89.8 13 0.00045 35.0 22.3 62 375-443 175-239 (286)
82 3u4y_A Uncharacterized protein 89.5 5.8 0.0002 38.3 14.4 69 376-450 189-260 (331)
83 3jro_A Fusion protein of prote 89.1 9.4 0.00032 42.5 17.4 62 376-443 68-133 (753)
84 2ece_A 462AA long hypothetical 89.0 20 0.00068 37.6 18.4 61 389-451 226-298 (462)
85 4a2l_A BT_4663, two-component 89.0 26 0.00089 39.0 21.1 55 392-449 563-621 (795)
86 4g56_B MGC81050 protein; prote 89.0 19 0.00065 35.6 18.9 61 376-444 240-303 (357)
87 3nok_A Glutaminyl cyclase; bet 88.8 4 0.00014 39.7 12.2 99 316-444 66-166 (268)
88 1rwi_B Serine/threonine-protei 88.4 16 0.00054 33.9 18.2 185 190-443 77-265 (270)
89 4gqb_B Methylosome protein 50; 88.3 21 0.00072 35.3 17.8 59 376-443 271-332 (344)
90 2ast_B S-phase kinase-associat 88.1 0.14 4.9E-06 50.9 1.4 42 137-178 6-47 (336)
91 3v9f_A Two-component system se 87.7 16 0.00056 40.6 18.2 175 206-442 469-656 (781)
92 3dwl_C Actin-related protein 2 87.5 3.4 0.00012 40.8 11.3 74 375-454 217-293 (377)
93 2hes_X YDR267CP; beta-propelle 87.1 20 0.0007 34.8 16.7 61 376-442 262-328 (330)
94 3f3f_A Nucleoporin SEH1; struc 86.9 21 0.00071 33.7 23.6 62 376-443 183-250 (351)
95 2aq5_A Coronin-1A; WD40 repeat 86.8 24 0.00081 35.2 17.4 64 375-444 188-256 (402)
96 3e5z_A Putative gluconolactona 86.2 23 0.00079 33.5 18.6 199 190-448 39-252 (296)
97 2aq5_A Coronin-1A; WD40 repeat 86.1 29 0.00098 34.5 17.9 66 375-444 232-301 (402)
98 3mkq_A Coatomer beta'-subunit; 85.9 22 0.00075 39.1 18.0 63 375-444 153-219 (814)
99 3ow8_A WD repeat-containing pr 85.7 27 0.00093 33.8 18.7 63 375-445 176-240 (321)
100 4a2l_A BT_4663, two-component 85.3 20 0.00069 39.9 17.3 59 392-450 194-252 (795)
101 1sq9_A Antiviral protein SKI8; 84.9 22 0.00074 35.0 15.8 62 377-444 199-269 (397)
102 3ow8_A WD repeat-containing pr 84.6 30 0.001 33.5 19.3 62 375-444 218-281 (321)
103 4gqb_B Methylosome protein 50; 84.5 29 0.001 34.2 16.5 63 376-444 183-248 (344)
104 3bg1_A Protein SEC13 homolog; 84.3 15 0.0005 35.6 13.9 70 376-453 229-305 (316)
105 1kb0_A Quinohemoprotein alcoho 84.3 44 0.0015 36.7 19.2 68 189-279 76-154 (677)
106 1vyh_C Platelet-activating fac 83.5 39 0.0013 33.9 19.2 63 191-276 120-183 (410)
107 1r5m_A SIR4-interacting protei 83.4 28 0.00095 34.2 15.9 60 377-444 302-363 (425)
108 1pjx_A Dfpase, DIISOPROPYLFLUO 83.1 31 0.0011 32.5 19.1 57 206-280 46-106 (314)
109 3sfz_A APAF-1, apoptotic pepti 83.1 24 0.00083 41.2 17.4 62 376-445 1098-1161(1249)
110 3v9f_A Two-component system se 83.1 40 0.0014 37.4 18.5 182 206-450 427-619 (781)
111 3sfz_A APAF-1, apoptotic pepti 83.1 49 0.0017 38.6 20.0 66 376-447 756-833 (1249)
112 4ery_A WD repeat-containing pr 83.0 33 0.0011 32.6 20.5 64 375-444 204-270 (312)
113 1ri6_A Putative isomerase YBHE 82.9 33 0.0011 32.6 22.4 69 376-450 191-272 (343)
114 3zwl_B Eukaryotic translation 82.9 34 0.0012 32.8 16.0 51 392-444 296-348 (369)
115 1pby_B Quinohemoprotein amine 82.2 35 0.0012 32.3 18.4 58 206-279 11-70 (337)
116 1got_B GT-beta; complex (GTP-b 81.9 39 0.0013 32.8 18.4 62 375-444 196-259 (340)
117 1n7d_A LDL receptor, low-densi 81.6 47 0.0016 36.6 18.1 67 375-447 552-619 (699)
118 2hes_X YDR267CP; beta-propelle 81.3 41 0.0014 32.5 17.0 68 376-449 212-287 (330)
119 4aow_A Guanine nucleotide-bind 81.2 38 0.0013 32.2 19.7 61 375-444 227-288 (340)
120 2p1m_B Transport inhibitor res 80.9 0.38 1.3E-05 51.8 0.7 36 138-173 4-40 (594)
121 1got_B GT-beta; complex (GTP-b 80.6 43 0.0015 32.4 20.1 63 375-443 238-302 (340)
122 3fm0_A Protein CIAO1; WDR39,SG 80.2 29 0.00099 33.9 14.4 70 375-450 117-189 (345)
123 1pgu_A Actin interacting prote 80.1 51 0.0018 34.4 17.3 63 377-447 175-243 (615)
124 3vl1_A 26S proteasome regulato 79.9 49 0.0017 32.6 19.8 22 423-444 258-280 (420)
125 3mkq_A Coatomer beta'-subunit; 79.8 44 0.0015 36.6 17.2 62 376-445 199-262 (814)
126 3k26_A Polycomb protein EED; W 79.1 42 0.0014 32.1 15.2 65 191-279 85-152 (366)
127 4aez_A CDC20, WD repeat-contai 78.4 56 0.0019 32.4 18.6 54 391-444 327-382 (401)
128 1ijq_A LDL receptor, low-densi 78.2 52 0.0018 31.9 21.9 64 375-444 176-240 (316)
129 3no2_A Uncharacterized protein 77.8 49 0.0017 31.5 16.6 59 376-444 137-197 (276)
130 3zwl_B Eukaryotic translation 77.7 50 0.0017 31.5 19.1 65 375-447 187-254 (369)
131 2dg1_A DRP35, lactonase; beta 77.6 20 0.00069 34.5 12.2 58 391-448 112-177 (333)
132 3dm0_A Maltose-binding peripla 77.3 85 0.0029 33.9 19.2 63 375-445 573-635 (694)
133 4gga_A P55CDC, cell division c 77.3 62 0.0021 32.3 22.9 57 206-278 125-182 (420)
134 2pm7_B Protein transport prote 77.2 50 0.0017 31.2 17.4 70 376-451 220-295 (297)
135 3odt_A Protein DOA1; ubiquitin 77.2 47 0.0016 30.9 15.9 59 391-450 246-304 (313)
136 1nir_A Nitrite reductase; hemo 76.0 41 0.0014 35.7 15.0 57 391-447 302-360 (543)
137 4a11_B DNA excision repair pro 75.8 61 0.0021 31.5 16.7 52 391-444 314-367 (408)
138 1nir_A Nitrite reductase; hemo 75.6 86 0.0029 33.1 18.2 61 391-453 346-418 (543)
139 2eqx_A Kelch repeat and BTB do 75.3 0.0021 7.2E-08 53.9 -15.2 83 51-140 7-100 (105)
140 2pbi_B Guanine nucleotide-bind 75.2 64 0.0022 31.5 17.1 62 375-444 210-273 (354)
141 3c5m_A Oligogalacturonate lyas 74.6 33 0.0011 33.5 13.1 54 391-448 264-335 (396)
142 1kv9_A Type II quinohemoprotei 74.6 32 0.0011 37.7 14.0 65 376-447 68-143 (668)
143 2pm9_A Protein WEB1, protein t 74.4 68 0.0023 31.4 17.8 63 375-444 275-339 (416)
144 2hqs_A Protein TOLB; TOLB, PAL 74.3 76 0.0026 31.9 21.2 188 206-449 159-351 (415)
145 4e54_B DNA damage-binding prot 74.1 41 0.0014 33.9 14.0 61 375-444 221-284 (435)
146 1r5m_A SIR4-interacting protei 74.0 68 0.0023 31.2 19.4 60 376-444 260-321 (425)
147 3c75_H MADH, methylamine dehyd 73.7 81 0.0028 32.5 16.0 77 190-278 84-162 (426)
148 1npe_A Nidogen, entactin; glyc 73.5 58 0.002 30.2 21.4 190 190-446 47-242 (267)
149 2ad6_A Methanol dehydrogenase 73.4 33 0.0011 36.9 13.4 65 376-447 117-192 (571)
150 2vdu_B TRNA (guanine-N(7)-)-me 73.4 54 0.0019 33.2 14.7 64 376-446 211-275 (450)
151 2vdu_B TRNA (guanine-N(7)-)-me 72.8 83 0.0029 31.7 18.3 55 391-446 330-397 (450)
152 3p5b_L Low density lipoprotein 72.4 86 0.0029 31.7 22.0 63 375-443 258-321 (400)
153 1yiq_A Quinohemoprotein alcoho 72.4 40 0.0014 37.1 14.1 65 376-447 72-147 (689)
154 3i2n_A WD repeat-containing pr 72.0 69 0.0024 30.4 17.7 65 376-446 130-203 (357)
155 1sq9_A Antiviral protein SKI8; 71.7 48 0.0017 32.3 13.5 68 190-276 197-269 (397)
156 3lrv_A PRE-mRNA-splicing facto 71.7 67 0.0023 31.0 14.4 61 376-444 183-246 (343)
157 3no2_A Uncharacterized protein 71.2 72 0.0025 30.3 16.3 78 335-430 147-230 (276)
158 1vyh_C Platelet-activating fac 70.7 89 0.0031 31.2 18.1 61 375-443 308-370 (410)
159 3m0c_C LDL receptor, low-densi 70.2 1.4E+02 0.0049 33.3 23.2 63 375-443 570-633 (791)
160 3fvz_A Peptidyl-glycine alpha- 70.1 80 0.0027 30.4 23.2 197 190-442 101-322 (329)
161 1kb0_A Quinohemoprotein alcoho 69.8 46 0.0016 36.5 13.8 65 376-447 79-154 (677)
162 4aow_A Guanine nucleotide-bind 69.5 76 0.0026 29.9 16.0 23 422-444 316-339 (340)
163 1jmx_B Amine dehydrogenase; ox 69.0 35 0.0012 32.5 11.5 62 376-443 56-135 (349)
164 1yiq_A Quinohemoprotein alcoho 68.8 69 0.0024 35.1 15.0 58 391-448 131-200 (689)
165 1qhu_A Protein (hemopexin); be 68.0 1.2E+02 0.0041 31.6 21.1 58 190-276 158-217 (460)
166 4gga_A P55CDC, cell division c 67.9 57 0.0019 32.6 13.3 135 266-443 126-262 (420)
167 2ynn_A Coatomer subunit beta'; 67.9 83 0.0028 29.7 16.9 60 376-444 154-219 (304)
168 4ggc_A P55CDC, cell division c 67.6 58 0.002 30.4 12.6 23 422-444 160-183 (318)
169 3ogk_B Coronatine-insensitive 67.5 1.3 4.3E-05 47.7 0.4 33 141-173 14-47 (592)
170 2ojh_A Uncharacterized protein 67.4 74 0.0025 28.9 18.5 65 206-282 62-127 (297)
171 3mmy_A MRNA export factor; mRN 66.8 89 0.003 29.6 16.3 60 375-443 141-200 (368)
172 2fp8_A Strictosidine synthase; 66.2 94 0.0032 29.7 18.3 59 206-281 40-117 (322)
173 2ad6_A Methanol dehydrogenase 65.5 64 0.0022 34.5 13.6 66 376-447 64-141 (571)
174 3f3f_A Nucleoporin SEH1; struc 65.4 89 0.003 29.1 15.9 63 376-444 72-145 (351)
175 1qks_A Cytochrome CD1 nitrite 64.8 1.2E+02 0.0042 32.3 15.6 56 391-446 320-377 (567)
176 3scy_A Hypothetical bacterial 64.7 54 0.0018 31.8 12.0 65 376-443 63-130 (361)
177 3i2n_A WD repeat-containing pr 64.6 97 0.0033 29.3 18.0 67 191-278 129-203 (357)
178 2fp8_A Strictosidine synthase; 64.4 1E+02 0.0035 29.5 14.7 51 392-443 261-314 (322)
179 1kv9_A Type II quinohemoprotei 64.4 92 0.0031 34.0 14.8 65 376-447 119-194 (668)
180 2p4o_A Hypothetical protein; p 63.6 1E+02 0.0035 29.3 14.7 64 376-443 84-148 (306)
181 3ott_A Two-component system se 63.4 1.2E+02 0.0042 33.2 15.9 57 375-442 569-626 (758)
182 1pgu_A Actin interacting prote 62.7 1.5E+02 0.005 30.7 19.0 59 375-442 553-614 (615)
183 3v65_B Low-density lipoprotein 62.6 1.3E+02 0.0044 30.1 21.8 188 190-443 127-319 (386)
184 2xyi_A Probable histone-bindin 62.4 59 0.002 32.7 12.1 61 376-442 245-309 (430)
185 2pbi_B Guanine nucleotide-bind 62.2 1.2E+02 0.0041 29.5 15.7 62 192-276 211-273 (354)
186 1erj_A Transcriptional repress 61.2 1.3E+02 0.0045 29.6 15.7 62 376-443 220-288 (393)
187 3pe7_A Oligogalacturonate lyas 61.0 1.2E+02 0.0042 29.3 17.3 62 390-451 215-282 (388)
188 4h5i_A Guanine nucleotide-exch 59.4 1.4E+02 0.0047 29.3 19.1 60 375-442 281-343 (365)
189 3lp9_A LS-24; SEED albumin, pl 58.7 71 0.0024 29.8 10.9 21 422-443 182-202 (227)
190 1w6s_A Methanol dehydrogenase 58.3 72 0.0025 34.5 12.4 57 392-448 132-199 (599)
191 1yfq_A Cell cycle arrest prote 57.7 1.3E+02 0.0043 28.4 17.8 58 206-282 33-97 (342)
192 3azo_A Aminopeptidase; POP fam 57.4 2E+02 0.0067 30.5 20.1 67 376-450 306-377 (662)
193 2p9w_A MAL S 1 allergenic prot 57.3 51 0.0017 32.9 10.0 130 375-509 148-305 (334)
194 3b7f_A Glycosyl hydrolase, BNR 56.9 1.6E+02 0.0054 29.2 20.0 59 392-450 139-216 (394)
195 2xyi_A Probable histone-bindin 56.9 1.3E+02 0.0045 30.0 13.7 25 423-447 389-415 (430)
196 2z3z_A Dipeptidyl aminopeptida 56.8 1.8E+02 0.0063 31.0 15.6 64 204-281 282-351 (706)
197 3gre_A Serine/threonine-protei 56.0 1.6E+02 0.0055 29.1 15.5 25 420-444 336-361 (437)
198 3iz6_a 40S ribosomal protein R 55.8 1.6E+02 0.0053 28.9 19.6 63 375-443 310-376 (380)
199 3fvz_A Peptidyl-glycine alpha- 55.6 1.5E+02 0.005 28.5 23.9 67 375-447 208-282 (329)
200 3odt_A Protein DOA1; ubiquitin 55.5 1.3E+02 0.0044 27.7 18.0 61 376-444 156-216 (313)
201 3azo_A Aminopeptidase; POP fam 55.0 2.1E+02 0.0073 30.2 17.0 71 376-450 254-333 (662)
202 3frx_A Guanine nucleotide-bind 54.6 1.5E+02 0.005 28.2 20.5 61 375-443 208-268 (319)
203 1su3_A Interstitial collagenas 54.2 2E+02 0.007 29.7 16.9 61 375-444 368-434 (450)
204 3ott_A Two-component system se 54.0 2.5E+02 0.0085 30.6 18.4 54 392-448 537-592 (758)
205 2ojh_A Uncharacterized protein 53.8 1.3E+02 0.0044 27.2 15.6 58 205-282 21-80 (297)
206 3oyo_A Hemopexin fold protein 53.8 1.4E+02 0.0048 27.7 12.7 59 375-442 128-198 (225)
207 3v64_C Agrin; beta propeller, 53.2 1.7E+02 0.0059 28.6 22.7 187 190-444 84-277 (349)
208 4ggc_A P55CDC, cell division c 53.0 1.4E+02 0.0049 27.6 22.2 57 206-278 45-102 (318)
209 3e5z_A Putative gluconolactona 53.0 92 0.0032 29.1 11.1 57 391-448 90-167 (296)
210 1yr2_A Prolyl oligopeptidase; 52.5 2.6E+02 0.0088 30.4 17.2 77 190-282 279-360 (741)
211 2ghs_A AGR_C_1268P; regucalcin 51.8 1.7E+02 0.0058 28.1 18.1 66 190-282 60-126 (326)
212 2xdw_A Prolyl endopeptidase; a 51.1 2.6E+02 0.009 30.1 17.5 77 190-282 244-331 (710)
213 1erj_A Transcriptional repress 50.5 1.9E+02 0.0066 28.3 17.0 54 206-278 187-242 (393)
214 3hrp_A Uncharacterized protein 49.8 2.1E+02 0.0073 28.7 15.4 26 423-448 230-255 (409)
215 3c5m_A Oligogalacturonate lyas 49.2 1.9E+02 0.0064 27.8 14.3 65 206-283 216-282 (396)
216 3o4h_A Acylamino-acid-releasin 49.0 2.3E+02 0.0079 29.4 14.5 59 208-282 134-192 (582)
217 3c7x_A Matrix metalloproteinas 48.5 1.6E+02 0.0053 26.7 14.5 58 375-444 110-177 (196)
218 2oiz_A Aromatic amine dehydrog 47.1 2.1E+02 0.0073 27.9 18.6 254 190-535 15-342 (361)
219 3tc9_A Hypothetical hydrolase; 45.6 1.4E+02 0.0046 30.5 11.6 60 376-441 239-300 (430)
220 3iz6_a 40S ribosomal protein R 45.6 2.2E+02 0.0076 27.7 14.5 61 376-442 171-237 (380)
221 2z3z_A Dipeptidyl aminopeptida 45.3 3.1E+02 0.011 29.2 18.8 69 375-449 323-398 (706)
222 1w6s_A Methanol dehydrogenase 43.7 1.5E+02 0.0051 31.9 11.9 66 376-447 64-147 (599)
223 3hfq_A Uncharacterized protein 43.6 31 0.0011 33.3 6.0 60 391-450 18-80 (347)
224 2ynn_A Coatomer subunit beta'; 43.3 2.1E+02 0.0072 26.8 17.2 60 376-443 241-303 (304)
225 1qks_A Cytochrome CD1 nitrite 42.0 3.4E+02 0.012 28.8 17.0 62 390-453 363-437 (567)
226 1mda_H Methylamine dehydrogena 41.8 2.8E+02 0.0095 27.7 15.9 59 474-541 300-358 (368)
227 3hrp_A Uncharacterized protein 40.8 2.9E+02 0.0099 27.6 19.8 196 190-449 141-361 (409)
228 1flg_A Protein (quinoprotein e 40.6 2.2E+02 0.0075 30.3 12.7 65 376-447 70-143 (582)
229 1npe_A Nidogen, entactin; glyc 40.5 2.2E+02 0.0074 26.1 17.3 63 376-446 92-159 (267)
230 2xbg_A YCF48-like protein; pho 39.4 2.7E+02 0.0091 26.8 20.0 68 375-450 216-287 (327)
231 3k26_A Polycomb protein EED; W 39.2 2.5E+02 0.0085 26.3 16.9 63 376-444 129-194 (366)
232 1pby_B Quinohemoprotein amine 37.4 2.5E+02 0.0086 25.9 14.7 66 376-447 47-129 (337)
233 3o4h_A Acylamino-acid-releasin 37.0 3.7E+02 0.013 27.8 14.2 55 391-447 175-232 (582)
234 2mad_H Methylamine dehydrogena 35.3 3.4E+02 0.012 26.8 26.6 78 190-277 32-109 (373)
235 1n7d_A LDL receptor, low-densi 35.0 4.1E+02 0.014 28.9 14.0 59 375-442 508-571 (699)
236 2bkl_A Prolyl endopeptidase; m 34.6 4.6E+02 0.016 28.1 15.8 62 205-282 251-315 (695)
237 3dr2_A Exported gluconolactona 33.4 3E+02 0.01 25.7 13.7 52 390-444 168-226 (305)
238 2bkl_A Prolyl endopeptidase; m 32.9 4.8E+02 0.016 27.9 20.5 69 376-448 283-357 (695)
239 3ei3_B DNA damage-binding prot 32.8 3.4E+02 0.011 26.0 17.1 64 376-445 132-197 (383)
240 1pjx_A Dfpase, DIISOPROPYLFLUO 32.6 1E+02 0.0035 28.8 7.7 56 391-448 46-106 (314)
241 1itv_A MMP9; adaptive molecula 32.0 2.8E+02 0.0096 24.9 18.5 58 375-444 110-176 (195)
242 3pe7_A Oligogalacturonate lyas 31.7 3.5E+02 0.012 25.8 13.3 65 206-282 168-233 (388)
243 3frx_A Guanine nucleotide-bind 31.5 3.3E+02 0.011 25.6 14.3 61 376-444 167-229 (319)
244 3dr2_A Exported gluconolactona 31.0 3.3E+02 0.011 25.4 16.8 203 190-448 56-273 (305)
245 2hz6_A Endoplasmic reticulum t 30.8 23 0.00079 35.4 2.6 23 422-444 91-113 (369)
246 1ijq_A LDL receptor, low-densi 30.3 3.6E+02 0.012 25.6 20.7 61 376-446 90-156 (316)
247 1jof_A Carboxy-CIS,CIS-muconat 28.5 4E+02 0.014 25.6 11.8 22 423-444 321-343 (365)
248 2ghs_A AGR_C_1268P; regucalcin 28.2 2.6E+02 0.0089 26.7 9.9 65 376-450 62-126 (326)
249 3iuj_A Prolyl endopeptidase; h 27.6 5.9E+02 0.02 27.2 17.8 177 190-467 245-430 (693)
250 3g4e_A Regucalcin; six bladed 27.5 1.8E+02 0.0063 27.2 8.5 66 376-451 26-91 (297)
251 3sov_A LRP-6, low-density lipo 27.4 4.2E+02 0.014 25.4 21.3 62 375-444 178-240 (318)
252 3mmy_A MRNA export factor; mRN 26.8 3.9E+02 0.013 24.8 20.0 69 191-280 54-123 (368)
253 2xdw_A Prolyl endopeptidase; a 26.4 6.2E+02 0.021 27.0 20.3 70 376-449 299-376 (710)
254 3lrv_A PRE-mRNA-splicing facto 24.6 4.5E+02 0.015 24.8 20.9 65 191-277 139-204 (343)
255 3tc9_A Hypothetical hydrolase; 23.9 4.2E+02 0.014 26.7 10.9 23 423-445 237-260 (430)
256 1yfq_A Cell cycle arrest prote 23.8 4.4E+02 0.015 24.4 14.6 60 376-442 113-179 (342)
257 1pex_A Collagenase-3, MMP-13; 23.7 4.1E+02 0.014 24.1 18.4 58 375-444 128-194 (207)
258 3ju4_A Endo-N-acetylneuraminid 22.6 6.4E+02 0.022 25.9 19.2 43 229-281 339-381 (670)
259 2xzm_R RACK1; ribosome, transl 22.6 4.9E+02 0.017 24.5 16.7 191 190-444 87-287 (343)
260 3b7f_A Glycosyl hydrolase, BNR 22.3 5.5E+02 0.019 25.0 12.4 72 376-450 69-155 (394)
261 2mad_H Methylamine dehydrogena 22.1 1.6E+02 0.0053 29.3 7.0 67 376-444 280-352 (373)
262 2ecf_A Dipeptidyl peptidase IV 20.9 3.5E+02 0.012 28.9 10.2 58 391-450 129-189 (741)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.2e-39 Score=330.60 Aligned_cols=272 Identities=17% Similarity=0.227 Sum_probs=233.7
Q ss_pred cCCCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 188 HQNPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 188 ~~~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
..++.||+|||. .+...+++++||+.+++|..++++|.+ |..|++++++++|||+||..... ......+++
T Consensus 22 ~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG~~~~~-------~~~~~~~~~ 92 (308)
T 1zgk_A 22 KVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLADLQVP-RSGLAGCVVGGLLYAVGGRNNSP-------DGNTDSSAL 92 (308)
T ss_dssp CCCCCEEEECCB-SSSBCCCEEEEETTTTEEEECCCCSSC-CBSCEEEEETTEEEEECCEEEET-------TEEEECCCE
T ss_pred CCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeECCCCCcc-cccceEEEECCEEEEECCCcCCC-------CCCeecceE
Confidence 348899999998 455678999999999999999999876 99999999999999999973100 001356799
Q ss_pred EEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCccc
Q 035526 268 LVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFE 347 (557)
Q Consensus 268 ~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~ 347 (557)
++||+.+++|+++++|+.+|..+++++++ + ++|++||.. +...++.+++||+.+++|+
T Consensus 93 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~----------------~iyv~GG~~----~~~~~~~~~~yd~~~~~W~ 150 (308)
T 1zgk_A 93 DCYNPMTNQWSPCAPMSVPRNRIGVGVID--G----------------HIYAVGGSH----GCIHHNSVERYEPERDEWH 150 (308)
T ss_dssp EEEETTTTEEEECCCCSSCCBTCEEEEET--T----------------EEEEECCEE----TTEECCCEEEEETTTTEEE
T ss_pred EEECCCCCeEeECCCCCcCccccEEEEEC--C----------------EEEEEcCCC----CCcccccEEEECCCCCeEe
Confidence 99999999999999999999998888775 3 899999975 4456889999999999999
Q ss_pred c--cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCE
Q 035526 348 G--SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI 425 (557)
Q Consensus 348 ~--~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~ 425 (557)
. ++|.+|..|+++.+++ +||++||.+... .++++++||+.+++|+.++++|.++..+++ ++++++
T Consensus 151 ~~~~~p~~r~~~~~~~~~~-----------~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~ 217 (308)
T 1zgk_A 151 LVAPMLTRRIGVGVAVLNR-----------LLYAVGGFDGTN-RLNSAECYYPERNEWRMITAMNTIRSGAGV-CVLHNC 217 (308)
T ss_dssp ECCCCSSCCBSCEEEEETT-----------EEEEECCBCSSC-BCCCEEEEETTTTEEEECCCCSSCCBSCEE-EEETTE
T ss_pred ECCCCCccccceEEEEECC-----------EEEEEeCCCCCC-cCceEEEEeCCCCeEeeCCCCCCccccceE-EEECCE
Confidence 8 7888999999999986 999999997664 588999999999999999999999988764 677999
Q ss_pred EEEEecC------CeEEEEECCCCcEEeccCCCCCCcccccCCEEEEEcCCCccCcCcEEEcccCCCCCCCCCceEEeeC
Q 035526 426 FYVYSET------EKLAGYYIERGFWIGIQTSPFPPCVIEYYPKLVSWARSHVPQLECWTKVSVHPDAPMDWSAAFVADR 499 (557)
Q Consensus 426 lYv~GG~------~~i~~YD~~~~~W~~i~~~p~p~~~~~~~~~lv~~~gG~~~~~~~W~~v~~~p~~~~~~~~~~~~~~ 499 (557)
|||+||. +.+++||+++++|+.++.+|.++ .++++++.+
T Consensus 218 iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-----------------------------------~~~~~~~~~ 262 (308)
T 1zgk_A 218 IYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR-----------------------------------SALGITVHQ 262 (308)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC-----------------------------------BSCEEEEET
T ss_pred EEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc-----------------------------------cceEEEEEC
Confidence 9999996 58999999999999998776554 234556789
Q ss_pred CEEEEEceeeEeceEeeeEEEEecCCCC-CCceecccCCcCccc
Q 035526 500 NHIFGVEMFKIFGQVLDFLTVCDVSEKW-MNWSHISRNHMDYEL 542 (557)
Q Consensus 500 ~~iyvvgG~~~~g~~~~~v~vy~~~d~~-~~W~~i~~~~~~~~~ 542 (557)
++||++||++ ....++++++| |++ ++|+.++.|+..+..
T Consensus 263 ~~i~v~GG~~-~~~~~~~v~~y---d~~~~~W~~~~~~p~~r~~ 302 (308)
T 1zgk_A 263 GRIYVLGGYD-GHTFLDSVECY---DPDTDTWSEVTRMTSGRSG 302 (308)
T ss_dssp TEEEEECCBC-SSCBCCEEEEE---ETTTTEEEEEEECSSCCBS
T ss_pred CEEEEEcCcC-CCcccceEEEE---cCCCCEEeecCCCCCCccc
Confidence 9999999987 56678899999 999 999999999988765
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=329.30 Aligned_cols=270 Identities=18% Similarity=0.220 Sum_probs=232.2
Q ss_pred CCCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 189 QNPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 189 ~~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
.++.||++||... ...+++++||+.+++|..++++|.+ |..|++++++++|||+||..+. ...++++
T Consensus 14 ~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG~~~~-----------~~~~~~~ 80 (302)
T 2xn4_A 14 LPKLMVVVGGQAP-KAIRSVECYDFKEERWHQVAELPSR-RCRAGMVYMAGLVFAVGGFNGS-----------LRVRTVD 80 (302)
T ss_dssp -CEEEEEECCBSS-SBCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEESCBCSS-----------SBCCCEE
T ss_pred CCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEcccCCcc-cccceEEEECCEEEEEeCcCCC-----------ccccceE
Confidence 4678999999754 3567899999999999999999876 9999999999999999998754 2467899
Q ss_pred EEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc
Q 035526 269 VFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (557)
Q Consensus 269 ~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~ 348 (557)
+||+.+++|+++++||.+|..+++++++ + ++|++||.. +...++.+++||+.+++|+.
T Consensus 81 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~----------------~iyv~GG~~----~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 81 SYDPVKDQWTSVANMRDRRSTLGAAVLN--G----------------LLYAVGGFD----GSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEET--T----------------EEEEEEEEC----SSCEEEEEEEEETTTTEEEE
T ss_pred EECCCCCceeeCCCCCccccceEEEEEC--C----------------EEEEEcCCC----CCccCceEEEEeCCCCeEee
Confidence 9999999999999999999998888775 3 899999975 45668899999999999998
Q ss_pred --cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCC-CCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCE
Q 035526 349 --SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWD-EPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI 425 (557)
Q Consensus 349 --~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~-~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~ 425 (557)
++|.+|..|+++.+++ +||++||.+... ..++++++||+.+++|+.++++|.++..+++ ++++++
T Consensus 139 ~~~~p~~r~~~~~~~~~~-----------~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~ 206 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVVGG-----------LLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGV-GVLNNL 206 (302)
T ss_dssp ECCCSSCCBSCEEEEETT-----------EEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEE-EEETTE
T ss_pred cCCCCCcccCceEEEECC-----------EEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccE-EEECCE
Confidence 7888999999999987 999999986543 2478999999999999999999999988654 778999
Q ss_pred EEEEecC------CeEEEEECCCCcEEeccCCCCCCcccccCCEEEEEcCCCccCcCcEEEcccCCCCCCCCCceEEeeC
Q 035526 426 FYVYSET------EKLAGYYIERGFWIGIQTSPFPPCVIEYYPKLVSWARSHVPQLECWTKVSVHPDAPMDWSAAFVADR 499 (557)
Q Consensus 426 lYv~GG~------~~i~~YD~~~~~W~~i~~~p~p~~~~~~~~~lv~~~gG~~~~~~~W~~v~~~p~~~~~~~~~~~~~~ 499 (557)
||++||. +.+++||+++++|+.++.+|.++ .+++++..+
T Consensus 207 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r-----------------------------------~~~~~~~~~ 251 (302)
T 2xn4_A 207 LYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR-----------------------------------RNAGVCAVN 251 (302)
T ss_dssp EEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC-----------------------------------BSCEEEEET
T ss_pred EEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc-----------------------------------ccCeEEEEC
Confidence 9999996 48999999999999998776554 234566789
Q ss_pred CEEEEEceeeEeceEeeeEEEEecCCCC-CCceecc-cCCcCcccCc
Q 035526 500 NHIFGVEMFKIFGQVLDFLTVCDVSEKW-MNWSHIS-RNHMDYELDA 544 (557)
Q Consensus 500 ~~iyvvgG~~~~g~~~~~v~vy~~~d~~-~~W~~i~-~~~~~~~~~~ 544 (557)
++||++||++ ....++.+++| |++ ++|+.++ .|+..+...+
T Consensus 252 ~~i~v~GG~~-~~~~~~~v~~y---d~~~~~W~~~~~~~~~~r~~~~ 294 (302)
T 2xn4_A 252 GLLYVVGGDD-GSCNLASVEYY---NPTTDKWTVVSSCMSTGRSYAG 294 (302)
T ss_dssp TEEEEECCBC-SSSBCCCEEEE---ETTTTEEEECSSCCSSCCBSCE
T ss_pred CEEEEECCcC-CCcccccEEEE---cCCCCeEEECCcccCcccccce
Confidence 9999999987 55678899999 999 9999997 7888776543
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=327.87 Aligned_cols=268 Identities=16% Similarity=0.199 Sum_probs=232.3
Q ss_pred CCCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 189 QNPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 189 ~~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
..+.||++||... .+++++||+.+++|..++++|.+ |..|+++++++.|||+||.. . ...++++
T Consensus 10 ~~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG~~-~-----------~~~~~~~ 73 (306)
T 3ii7_A 10 KHDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRCPFEK-RRDAACVFWDNVVYILGGSQ-L-----------FPIKRMD 73 (306)
T ss_dssp CCCEEEEEECCSS---TTSEEEEETTTTEEEECCCCSCC-CBSCEEEEETTEEEEECCBS-S-----------SBCCEEE
T ss_pred ccceEEEEeCCCC---CceEEEecCCCCCEecCCCCCcc-cceeEEEEECCEEEEEeCCC-C-----------CCcceEE
Confidence 3588999999754 68899999999999999999986 99999999999999999977 2 3568999
Q ss_pred EEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc
Q 035526 269 VFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (557)
Q Consensus 269 ~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~ 348 (557)
+|||.+++|+++++||.+|..+++++++ + ++|++||.+. +...++.+++||+.+++|+.
T Consensus 74 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~----------------~iyv~GG~~~---~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 74 CYNVVKDSWYSKLGPPTPRDSLAACAAE--G----------------KIYTSGGSEV---GNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp EEETTTTEEEEEECCSSCCBSCEEEEET--T----------------EEEEECCBBT---TBSCCCCEEEEETTTTEEEE
T ss_pred EEeCCCCeEEECCCCCccccceeEEEEC--C----------------EEEEECCCCC---CCcEeeeEEEEeCCCCceEe
Confidence 9999999999999999999998888775 3 8999999752 45568899999999999998
Q ss_pred --cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCC---CCceEEEEeCCCCcEEEccCCCCCCcCceEEEEEC
Q 035526 349 --SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDE---PLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCN 423 (557)
Q Consensus 349 --~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~---~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~ 423 (557)
++|.+|..|+++.+++ +||++||...... .++++++||+.+++|+.++++|.++..+++ ++++
T Consensus 133 ~~~~p~~r~~~~~~~~~~-----------~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~ 200 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANG-----------LIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGL-VFVK 200 (306)
T ss_dssp ECCCSSCCBSCEEEEETT-----------EEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEE-EEET
T ss_pred CCCCcCCcceeEEEEECC-----------EEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceE-EEEC
Confidence 7888999999999886 9999999866542 288999999999999999999999988664 7779
Q ss_pred CEEEEEecC------CeEEEEECCCCcEEeccCCCCCCcccccCCEEEEEcCCCccCcCcEEEcccCCCCCCCCCceEEe
Q 035526 424 GIFYVYSET------EKLAGYYIERGFWIGIQTSPFPPCVIEYYPKLVSWARSHVPQLECWTKVSVHPDAPMDWSAAFVA 497 (557)
Q Consensus 424 g~lYv~GG~------~~i~~YD~~~~~W~~i~~~p~p~~~~~~~~~lv~~~gG~~~~~~~W~~v~~~p~~~~~~~~~~~~ 497 (557)
++||++||. +.+++||+++++|+.++.+|.++ .++++++
T Consensus 201 ~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----------------------------------~~~~~~~ 245 (306)
T 3ii7_A 201 DKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKG-----------------------------------VTVKCAA 245 (306)
T ss_dssp TEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCB-----------------------------------SCCEEEE
T ss_pred CEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCc-----------------------------------cceeEEE
Confidence 999999995 58999999999999998776554 2345667
Q ss_pred eCCEEEEEceeeEeceEeeeEEEEecCCCC-CCceecccCCcCcccCc
Q 035526 498 DRNHIFGVEMFKIFGQVLDFLTVCDVSEKW-MNWSHISRNHMDYELDA 544 (557)
Q Consensus 498 ~~~~iyvvgG~~~~g~~~~~v~vy~~~d~~-~~W~~i~~~~~~~~~~~ 544 (557)
.+++||++||++ ....++.+++| |++ ++|+.++.|+..+...+
T Consensus 246 ~~~~i~v~GG~~-~~~~~~~~~~y---d~~~~~W~~~~~~~~~r~~~~ 289 (306)
T 3ii7_A 246 VGSIVYVLAGFQ-GVGRLGHILEY---NTETDKWVANSKVRAFPVTSC 289 (306)
T ss_dssp ETTEEEEEECBC-SSSBCCEEEEE---ETTTTEEEEEEEEECCSCTTC
T ss_pred ECCEEEEEeCcC-CCeeeeeEEEE---cCCCCeEEeCCCcccccceeE
Confidence 799999999997 55577899999 999 99999999998776544
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=323.52 Aligned_cols=269 Identities=17% Similarity=0.282 Sum_probs=233.8
Q ss_pred CCCeEEEEee-ecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 189 QNPWLFLFGA-VKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 189 ~~~~L~v~GG-~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
.++.||++|| ...+...+++++||+.+++|..++++|.+ |..|++++++++|||+||..+. ...+++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~l~v~GG~~~~-----------~~~~~~ 80 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRK-RRYVASVSLHDRIYVIGGYDGR-----------SRLSSV 80 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSC-CBSCEEEEETTEEEEECCBCSS-----------CBCCCE
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChh-hccccEEEECCEEEEEcCCCCC-----------ccCceE
Confidence 4778999999 55556788999999999999999999875 9999999999999999998743 356799
Q ss_pred EEEecCCCc---EEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCC
Q 035526 268 LVFSPLTKS---WWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFD 344 (557)
Q Consensus 268 ~~ydp~t~~---W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~ 344 (557)
++||+.+++ |+++++||.+|..+++++++ + ++|++||.. +...++.+++||+.++
T Consensus 81 ~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~--~----------------~lyv~GG~~----~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 81 ECLDYTADEDGVWYSVAPMNVRRGLAGATTLG--D----------------MIYVSGGFD----GSRRHTSMERYDPNID 138 (301)
T ss_dssp EEEETTCCTTCCCEEECCCSSCCBSCEEEEET--T----------------EEEEECCBC----SSCBCCEEEEEETTTT
T ss_pred EEEECCCCCCCeeEECCCCCCCccceeEEEEC--C----------------EEEEEcccC----CCcccceEEEEcCCCC
Confidence 999999999 99999999999998887775 3 899999976 4456889999999999
Q ss_pred cccc--cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEE
Q 035526 345 GFEG--SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC 422 (557)
Q Consensus 345 ~W~~--~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~ 422 (557)
+|+. ++|.+|..|++++.++ +||++||.+... .++++++||+.+++|+.++++|.++..+++ +++
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~~~-----------~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~-~~~ 205 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVASG-----------VIYCLGGYDGLN-ILNSVEKYDPHTGHWTNVTPMATKRSGAGV-ALL 205 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEETT-----------EEEEECCBCSSC-BCCCEEEEETTTTEEEEECCCSSCCBSCEE-EEE
T ss_pred eEEECCCCCCCcccceEEEECC-----------EEEEECCCCCCc-ccceEEEEeCCCCcEEeCCCCCcccccceE-EEE
Confidence 9998 7889999999999986 999999987654 789999999999999999999999987654 778
Q ss_pred CCEEEEEecC------CeEEEEECCCCcEEeccCCCCCCcccccCCEEEEEcCCCccCcCcEEEcccCCCCCCCCCceEE
Q 035526 423 NGIFYVYSET------EKLAGYYIERGFWIGIQTSPFPPCVIEYYPKLVSWARSHVPQLECWTKVSVHPDAPMDWSAAFV 496 (557)
Q Consensus 423 ~g~lYv~GG~------~~i~~YD~~~~~W~~i~~~p~p~~~~~~~~~lv~~~gG~~~~~~~W~~v~~~p~~~~~~~~~~~ 496 (557)
+++||++||. +.++.||+++++|+.++.+|.++ .+++.+
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-----------------------------------~~~~~~ 250 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPR-----------------------------------CYVGAT 250 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCC-----------------------------------BSCEEE
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcc-----------------------------------cceeEE
Confidence 9999999995 48999999999999998776554 234556
Q ss_pred eeCCEEEEEceeeEeceEeeeEEEEecCCCC-CCceecccCCcCcccC
Q 035526 497 ADRNHIFGVEMFKIFGQVLDFLTVCDVSEKW-MNWSHISRNHMDYELD 543 (557)
Q Consensus 497 ~~~~~iyvvgG~~~~g~~~~~v~vy~~~d~~-~~W~~i~~~~~~~~~~ 543 (557)
+.+++||++||++ ....++.+++| |++ ++|+.++.|+..+...
T Consensus 251 ~~~~~i~v~GG~~-~~~~~~~v~~y---d~~~~~W~~~~~~~~~r~~~ 294 (301)
T 2vpj_A 251 VLRGRLYAIAGYD-GNSLLSSIECY---DPIIDSWEVVTSMGTQRCDA 294 (301)
T ss_dssp EETTEEEEECCBC-SSSBEEEEEEE---ETTTTEEEEEEEEEEEEESC
T ss_pred EECCEEEEEcCcC-CCcccccEEEE---cCCCCeEEEcCCCCcccccc
Confidence 7899999999987 55677899999 999 9999999998877653
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=314.34 Aligned_cols=268 Identities=16% Similarity=0.194 Sum_probs=219.4
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCc-CcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASIL-KGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~-~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
++.||++|| +++++|||.+++|.. +++|. .+|.+|++++++++|||+||...... .......++++
T Consensus 4 ~~~l~~~GG-------~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~-----~~~~~~~~~~~ 70 (315)
T 4asc_A 4 QDLIFMISE-------EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNED-----NKEDPMSAYFL 70 (315)
T ss_dssp EEEEEEEET-------TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSS-----CSSSCEEEEEE
T ss_pred ceEEEEEcC-------CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCC-----CCccccccceE
Confidence 457999998 469999999999987 66643 25999999999999999999732110 00112456799
Q ss_pred EEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc
Q 035526 269 VFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (557)
Q Consensus 269 ~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~ 348 (557)
+|||.+++|+++++||.+|..+++++++ + ++|++||.... ++...++.+++||+.+++|+.
T Consensus 71 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~----------------~lyv~GG~~~~-~~~~~~~~~~~~d~~~~~W~~ 131 (315)
T 4asc_A 71 QFDHLDSEWLGMPPLPSPRCLFGLGEAL--N----------------SIYVVGGREIK-DGERCLDSVMCYDRLSFKWGE 131 (315)
T ss_dssp EEETTTTEEEECCCBSSCEESCEEEEET--T----------------EEEEECCEESS-TTCCBCCCEEEEETTTTEEEE
T ss_pred EecCCCCeEEECCCCCcchhceeEEEEC--C----------------EEEEEeCCcCC-CCCcccceEEEECCCCCcEeE
Confidence 9999999999999999999998888775 3 89999997421 245678999999999999998
Q ss_pred --cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEE
Q 035526 349 --SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIF 426 (557)
Q Consensus 349 --~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~l 426 (557)
++|.+|..|+++..++ +||++||.......++++++||+.+++|+.++++|.+|..+++ ++++++|
T Consensus 132 ~~~~p~~r~~~~~~~~~~-----------~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~i 199 (315)
T 4asc_A 132 SDPLPYVVYGHTVLSHMD-----------LVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGA-TVHDGRI 199 (315)
T ss_dssp CCCCSSCCBSCEEEEETT-----------EEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEE-EEETTEE
T ss_pred CCCCCCcccceeEEEECC-----------EEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEE-EEECCEE
Confidence 7888999999999987 9999999955445789999999999999999999999998764 6779999
Q ss_pred EEEecC------CeEEEEECCCCcEEeccCCCCCCcccccCCEEEEEcCCCccCcCcEEEcccCCCCCCCCCceEEeeCC
Q 035526 427 YVYSET------EKLAGYYIERGFWIGIQTSPFPPCVIEYYPKLVSWARSHVPQLECWTKVSVHPDAPMDWSAAFVADRN 500 (557)
Q Consensus 427 Yv~GG~------~~i~~YD~~~~~W~~i~~~p~p~~~~~~~~~lv~~~gG~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~ 500 (557)
||+||. +.+++||+++++|+.++++|.|+ .++++++.++
T Consensus 200 yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----------------------------------~~~~~~~~~~ 244 (315)
T 4asc_A 200 IVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQER-----------------------------------SSLSLVSLVG 244 (315)
T ss_dssp EEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCC-----------------------------------BSCEEEEETT
T ss_pred EEEeccCCCCccceEEEEECCCCeEEECCCCCCcc-----------------------------------cceeEEEECC
Confidence 999996 37999999999999998776555 2345667899
Q ss_pred EEEEEceeeEe----c----eEeeeEEEEecCCCC-CCceecccCCcC
Q 035526 501 HIFGVEMFKIF----G----QVLDFLTVCDVSEKW-MNWSHISRNHMD 539 (557)
Q Consensus 501 ~iyvvgG~~~~----g----~~~~~v~vy~~~d~~-~~W~~i~~~~~~ 539 (557)
+||++||++.. + ..++.+++| |++ ++|+.+.+.+..
T Consensus 245 ~l~v~GG~~~~~~~~~~~~~~~~~~v~~y---d~~~~~W~~~~~~~r~ 289 (315)
T 4asc_A 245 TLYAIGGFATLETESGELVPTELNDIWRY---NEEEKKWEGVLREIAY 289 (315)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEEEE---ETTTTEEEEEESCSSC
T ss_pred EEEEECCccccCcCCccccccccCcEEEe---cCCCChhhhhccCCcC
Confidence 99999998631 1 467889999 999 999999554443
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-36 Score=309.71 Aligned_cols=281 Identities=14% Similarity=0.184 Sum_probs=221.8
Q ss_pred CCCeEEEEeeecCCcccceEEEeeCCCCceEEccCCC-cCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 189 QNPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASI-LKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 189 ~~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p-~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
..+.||++||. .+++|||.+++|... +++ ..+|.+|+++++++.|||+||...... .......+.+
T Consensus 14 ~~~~i~~~GG~-------~~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~-----~~~~~~~~~~ 80 (318)
T 2woz_A 14 VKDLILLVNDT-------AAVAYDPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEE-----NKDQPLQSYF 80 (318)
T ss_dssp EEEEEEEECSS-------EEEEEETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC------------CCCBEE
T ss_pred ecchhhhcccc-------ceEEECCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCcc-----ccCCCccccE
Confidence 46789999983 379999999999984 443 235999999999999999999642110 0000134569
Q ss_pred EEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCccc
Q 035526 268 LVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFE 347 (557)
Q Consensus 268 ~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~ 347 (557)
++|||.+++|+++++||.+|..+++++++ + ++|++||... ++...++.+++||+.+++|+
T Consensus 81 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~----------------~iyv~GG~~~--~~~~~~~~~~~yd~~~~~W~ 140 (318)
T 2woz_A 81 FQLDNVSSEWVGLPPLPSARCLFGLGEVD--D----------------KIYVVAGKDL--QTEASLDSVLCYDPVAAKWS 140 (318)
T ss_dssp EEEETTTTEEEECSCBSSCBCSCEEEEET--T----------------EEEEEEEEBT--TTCCEEEEEEEEETTTTEEE
T ss_pred EEEeCCCCcEEECCCCCccccccceEEEC--C----------------EEEEEcCccC--CCCcccceEEEEeCCCCCEe
Confidence 99999999999999999999998887775 3 8999999752 13456889999999999999
Q ss_pred c--cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCE
Q 035526 348 G--SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI 425 (557)
Q Consensus 348 ~--~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~ 425 (557)
. ++|.+|..|+++..++ +||++||.......++++++||+.+++|+.++++|.++..+++ ++++++
T Consensus 141 ~~~~~p~~r~~~~~~~~~~-----------~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~ 208 (318)
T 2woz_A 141 EVKNLPIKVYGHNVISHNG-----------MIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGV-AIHKGK 208 (318)
T ss_dssp EECCCSSCEESCEEEEETT-----------EEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEE-EEETTE
T ss_pred ECCCCCCcccccEEEEECC-----------EEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceE-EEECCE
Confidence 8 7888999999999886 9999999855445788999999999999999999999988765 778999
Q ss_pred EEEEecC------CeEEEEECCCCcEEeccCCCCCCcccccCCEEEEEcCCCccCcCcEEEcccCCCCCCCCCceEEeeC
Q 035526 426 FYVYSET------EKLAGYYIERGFWIGIQTSPFPPCVIEYYPKLVSWARSHVPQLECWTKVSVHPDAPMDWSAAFVADR 499 (557)
Q Consensus 426 lYv~GG~------~~i~~YD~~~~~W~~i~~~p~p~~~~~~~~~lv~~~gG~~~~~~~W~~v~~~p~~~~~~~~~~~~~~ 499 (557)
|||+||. +.+++||+++++|+.++.+|.++ .++++++.+
T Consensus 209 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----------------------------------~~~~~~~~~ 253 (318)
T 2woz_A 209 IVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQER-----------------------------------SSISLVSLA 253 (318)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCC-----------------------------------BSCEEEEET
T ss_pred EEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcc-----------------------------------cceEEEEEC
Confidence 9999995 47899999999999998776554 234566789
Q ss_pred CEEEEEceeeEe--------ceEeeeEEEEecCCCC-CCceecccCCcCcccCccceeeccccc
Q 035526 500 NHIFGVEMFKIF--------GQVLDFLTVCDVSEKW-MNWSHISRNHMDYELDATSCMTKSLAV 554 (557)
Q Consensus 500 ~~iyvvgG~~~~--------g~~~~~v~vy~~~d~~-~~W~~i~~~~~~~~~~~~sc~~~~~~~ 554 (557)
++||++||++.. ...++.+++| |++ ++|+.+ ++..+...++.++...+-+
T Consensus 254 ~~i~v~GG~~~~~~~~~~~~~~~~~~v~~y---d~~~~~W~~~--~~~~r~~~~~~~~~~~iyi 312 (318)
T 2woz_A 254 GSLYAIGGFAMIQLESKEFAPTEVNDIWKY---EDDKKEWAGM--LKEIRYASGASCLATRLNL 312 (318)
T ss_dssp TEEEEECCBCCBC----CCBCCBCCCEEEE---ETTTTEEEEE--ESCCGGGTTCEEEEEEEEG
T ss_pred CEEEEECCeeccCCCCceeccceeeeEEEE---eCCCCEehhh--cccccccccceeeCCEEEE
Confidence 999999998631 1346889999 999 999999 4444444444444433333
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=293.59 Aligned_cols=252 Identities=18% Similarity=0.252 Sum_probs=211.4
Q ss_pred cchhhhhhcccccccccCChhhhhhhhccccCCCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE
Q 035526 158 TSLMNARLVCKKWRYLTTTPRFLQMRREGLHQNPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI 237 (557)
Q Consensus 158 ~sl~~~~~vck~W~~l~~sp~~~~~~~~~~~~~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~ 237 (557)
.++..+++..++|..+...|... ........++.||++||.......++++.||+.+++|..++++|.+ |..|+++++
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~ 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRR-CRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR-RSTLGAAVL 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCccc-ccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc-ccceEEEEE
Confidence 45667788888999987666311 1111223489999999987666778999999999999999999976 999999999
Q ss_pred CCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcE
Q 035526 238 MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPR 317 (557)
Q Consensus 238 ~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~l 317 (557)
+++|||+||..+. ...+++++||+.+++|+.+++||.+|..+++++++ + ++
T Consensus 108 ~~~iyv~GG~~~~-----------~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~----------------~i 158 (302)
T 2xn4_A 108 NGLLYAVGGFDGS-----------TGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVG--G----------------LL 158 (302)
T ss_dssp TTEEEEEEEECSS-----------CEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEET--T----------------EE
T ss_pred CCEEEEEcCCCCC-----------ccCceEEEEeCCCCeEeecCCCCCcccCceEEEEC--C----------------EE
Confidence 9999999998754 25679999999999999999999999998877765 3 89
Q ss_pred EEEcccccccCCCCcccceeeccccCCcccc--cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEE
Q 035526 318 SRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG--SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEI 395 (557)
Q Consensus 318 yv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~--~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~ 395 (557)
|++||.+.. ....++.+++||+.+++|+. ++|.+|..|+++++++ +||++||.++.. .++++++
T Consensus 159 yv~GG~~~~--~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-----------~iyv~GG~~~~~-~~~~~~~ 224 (302)
T 2xn4_A 159 YAVGGYDVA--SRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNN-----------LLYAVGGHDGPL-VRKSVEV 224 (302)
T ss_dssp EEECCEETT--TTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT-----------EEEEECCBSSSS-BCCCEEE
T ss_pred EEEeCCCCC--CCccccEEEEEeCCCCcEEECCCCccccccccEEEECC-----------EEEEECCCCCCc-ccceEEE
Confidence 999997521 12347889999999999998 7888999999999986 999999987653 6789999
Q ss_pred EeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC------CeEEEEECCCCcEEecc-CCCCCC
Q 035526 396 YDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET------EKLAGYYIERGFWIGIQ-TSPFPP 455 (557)
Q Consensus 396 YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~------~~i~~YD~~~~~W~~i~-~~p~p~ 455 (557)
||+.+++|+.++++|.++..+. +++++++|||+||. +.+++||+++++|+.++ .+|.|+
T Consensus 225 yd~~~~~W~~~~~~~~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r 290 (302)
T 2xn4_A 225 YDPTTNAWRQVADMNMCRRNAG-VCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGR 290 (302)
T ss_dssp EETTTTEEEEECCCSSCCBSCE-EEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCC
T ss_pred EeCCCCCEeeCCCCCCccccCe-EEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCccc
Confidence 9999999999999999988765 47789999999996 37999999999999997 676665
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=7.9e-35 Score=296.78 Aligned_cols=250 Identities=19% Similarity=0.253 Sum_probs=214.1
Q ss_pred ccchhhhhhcccccccccCChhhhhhhhc--cccCCCeEEEEeee----cCCcccceEEEeeCCCCceEEccCCCcCcce
Q 035526 157 LTSLMNARLVCKKWRYLTTTPRFLQMRRE--GLHQNPWLFLFGAV----KDGYYSGEIHALDVSQDQWHRIDASILKGRF 230 (557)
Q Consensus 157 ~~sl~~~~~vck~W~~l~~sp~~~~~~~~--~~~~~~~L~v~GG~----~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~ 230 (557)
+.++..+++..++|..+...|. .+.. ....++.||++||. ......++++.||+.+++|..++++|.+ |.
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~ 113 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQV---PRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP-RN 113 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSS---CCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC-CB
T ss_pred cceEEEEcCCCCeEeECCCCCc---ccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC-cc
Confidence 4567888899999999976663 2221 22348999999998 3344678899999999999999999986 99
Q ss_pred eeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCC
Q 035526 231 MFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSH 310 (557)
Q Consensus 231 ~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~ 310 (557)
.|++++++++|||+||..+. ...+++++||+.+++|+++++||.+|..+++++++ +
T Consensus 114 ~~~~~~~~~~iyv~GG~~~~-----------~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--~----------- 169 (308)
T 1zgk_A 114 RIGVGVIDGHIYAVGGSHGC-----------IHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLN--R----------- 169 (308)
T ss_dssp TCEEEEETTEEEEECCEETT-----------EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEET--T-----------
T ss_pred ccEEEEECCEEEEEcCCCCC-----------cccccEEEECCCCCeEeECCCCCccccceEEEEEC--C-----------
Confidence 99999999999999998754 25678999999999999999999999998887764 3
Q ss_pred CCCCCcEEEEcccccccCCCCcccceeeccccCCcccc--cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCC
Q 035526 311 QDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG--SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDE 388 (557)
Q Consensus 311 ~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~--~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~ 388 (557)
++|++||.+ +...++.+++||+.+++|+. ++|.+|..++++.+++ +||++||.+...
T Consensus 170 -----~iyv~GG~~----~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-----------~iyv~GG~~~~~- 228 (308)
T 1zgk_A 170 -----LLYAVGGFD----GTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHN-----------CIYAAGGYDGQD- 228 (308)
T ss_dssp -----EEEEECCBC----SSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT-----------EEEEECCBCSSS-
T ss_pred -----EEEEEeCCC----CCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECC-----------EEEEEeCCCCCC-
Confidence 899999975 34458899999999999998 7888999999999986 999999997654
Q ss_pred CCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC------CeEEEEECCCCcEEeccCCCCCCc
Q 035526 389 PLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET------EKLAGYYIERGFWIGIQTSPFPPC 456 (557)
Q Consensus 389 ~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~------~~i~~YD~~~~~W~~i~~~p~p~~ 456 (557)
.++++++||+.+++|+.++++|.++..+++ ++++++|||+||. +.+++||+++++|+.++.||.|+.
T Consensus 229 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 301 (308)
T 1zgk_A 229 QLNSVERYDVETETWTFVAPMKHRRSALGI-TVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRS 301 (308)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEE-EEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCB
T ss_pred ccceEEEEeCCCCcEEECCCCCCCccceEE-EEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCcc
Confidence 688999999999999999999999988664 6779999999995 489999999999999999888774
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=294.30 Aligned_cols=252 Identities=18% Similarity=0.229 Sum_probs=212.7
Q ss_pred cchhhhhhcccccccccCChhhhhhhhc--cccCCCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEE
Q 035526 158 TSLMNARLVCKKWRYLTTTPRFLQMRRE--GLHQNPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVV 235 (557)
Q Consensus 158 ~sl~~~~~vck~W~~l~~sp~~~~~~~~--~~~~~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a 235 (557)
.++..+++..++|..+...|. .|.. ....++.||++||.. ....++++.||+.+++|..++++|.+ |..|+++
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~ 98 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFE---KRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGPPTP-RDSLAAC 98 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSC---CCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEECCSSC-CBSCEEE
T ss_pred ceEEEecCCCCCEecCCCCCc---ccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCCCCcc-ccceeEE
Confidence 567788899999999977663 2222 223488999999987 55678999999999999999999876 9999999
Q ss_pred EECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCC
Q 035526 236 SIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRF 315 (557)
Q Consensus 236 ~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~ 315 (557)
+++++|||+||.+... ...+++++||+.+++|+++++||.+|..+++++++ +
T Consensus 99 ~~~~~iyv~GG~~~~~----------~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~---------------- 150 (306)
T 3ii7_A 99 AAEGKIYTSGGSEVGN----------SALYLFECYDTRTESWHTKPSMLTQRCSHGMVEAN--G---------------- 150 (306)
T ss_dssp EETTEEEEECCBBTTB----------SCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET--T----------------
T ss_pred EECCEEEEECCCCCCC----------cEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEEC--C----------------
Confidence 9999999999986321 35679999999999999999999999998877764 3
Q ss_pred cEEEEcccccccCCCCcccceeeccccCCcccc--cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceE
Q 035526 316 PRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG--SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSG 393 (557)
Q Consensus 316 ~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~--~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~v 393 (557)
++|++||..........++.+++||+.+++|+. ++|.+|..|+++.+++ +||++||.+... .++++
T Consensus 151 ~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-----------~i~v~GG~~~~~-~~~~~ 218 (306)
T 3ii7_A 151 LIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKD-----------KIFAVGGQNGLG-GLDNV 218 (306)
T ss_dssp EEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT-----------EEEEECCEETTE-EBCCE
T ss_pred EEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECC-----------EEEEEeCCCCCC-CCceE
Confidence 899999975211111228899999999999999 7888999999999986 999999986653 67899
Q ss_pred EEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC------CeEEEEECCCCcEEeccCCCCCC
Q 035526 394 EIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET------EKLAGYYIERGFWIGIQTSPFPP 455 (557)
Q Consensus 394 e~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~------~~i~~YD~~~~~W~~i~~~p~p~ 455 (557)
++||+.+++|+.++++|.++..+.+ ++++++|||+||. +.++.||+++++|+.++.+|.++
T Consensus 219 ~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r 285 (306)
T 3ii7_A 219 EYYDIKLNEWKMVSPMPWKGVTVKC-AAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFP 285 (306)
T ss_dssp EEEETTTTEEEECCCCSCCBSCCEE-EEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCS
T ss_pred EEeeCCCCcEEECCCCCCCccceeE-EEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCccccc
Confidence 9999999999999999999988664 6779999999995 48999999999999999887766
No 10
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=9.5e-35 Score=301.78 Aligned_cols=274 Identities=13% Similarity=0.042 Sum_probs=206.2
Q ss_pred CCeEEEEeeecCCcccceEEEeeCC--CCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVS--QDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~--~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
++.||++||... +++++||+. +++|..++++|..+|..|++++++++|||+||..... .......+++
T Consensus 19 ~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~------~~~~~~~~~v 88 (357)
T 2uvk_A 19 NDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNS------EGLTQVFNDV 88 (357)
T ss_dssp TTEEEEECGGGT----TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECT------TSCEEECCCE
T ss_pred CCEEEEEeCcCC----CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCC------CccceeeccE
Confidence 899999999753 479999998 4999999999933499999999999999999982100 0011357899
Q ss_pred EEEecCCCcEEEcccCC-cCcccceEEEEecCCCcccccccCCCCCCCCcEEEEccccccc-C-----------------
Q 035526 268 LVFSPLTKSWWKVASMR-YARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVY-E----------------- 328 (557)
Q Consensus 268 ~~ydp~t~~W~~l~~m~-~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y-~----------------- 328 (557)
++|||.+++|+++++|+ .+|..+++++++ + +||++||.+... +
T Consensus 89 ~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~--~----------------~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
T 2uvk_A 89 HKYNPKTNSWVKLMSHAPMGMAGHVTFVHN--G----------------KAYVTGGVNQNIFNGYFEDLNEAGKDSTAID 150 (357)
T ss_dssp EEEETTTTEEEECSCCCSSCCSSEEEEEET--T----------------EEEEEECCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred EEEeCCCCcEEECCCCCCcccccceEEEEC--C----------------EEEEEeCcCCCcCcccccchhhcCCcccchh
Confidence 99999999999999998 888887666644 4 899999975210 0
Q ss_pred ------------CCCcccceeeccccCCcccc--cCCCCCCC-ceEEEeccchhhhhhccceEEEEEcccCCCCCCCceE
Q 035526 329 ------------DPHRLSLRRQYRNSFDGFEG--SLLPNRKS-YKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSG 393 (557)
Q Consensus 329 ------------~~~~l~~v~~yd~~~~~W~~--~~~~~r~~-~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~v 393 (557)
....++.+++||+.+++|+. ++|.+|.. +++++.++ +||++||.+.......++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~-----------~iyv~GG~~~~~~~~~~v 219 (357)
T 2uvk_A 151 KINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGD-----------KTWLINGEAKPGLRTDAV 219 (357)
T ss_dssp HHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETT-----------EEEEECCEEETTEECCCE
T ss_pred hhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECC-----------EEEEEeeecCCCcccCce
Confidence 00246899999999999998 67766554 88888886 999999986544457889
Q ss_pred EEEeC--CCCcEEEccCCCCCCcCc-eEEEEECCEEEEEecC-----------------------CeEEEEECCCCcEEe
Q 035526 394 EIYDS--VSNKWMEIQRLPVDFGVV-SSGVVCNGIFYVYSET-----------------------EKLAGYYIERGFWIG 447 (557)
Q Consensus 394 e~YD~--~t~~W~~v~~lp~~~~~~-~~~vv~~g~lYv~GG~-----------------------~~i~~YD~~~~~W~~ 447 (557)
++||+ .+++|+.++++|.++..+ +++++++++|||+||. +.+++||+++++|+.
T Consensus 220 ~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~ 299 (357)
T 2uvk_A 220 FELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDK 299 (357)
T ss_dssp EEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEE
T ss_pred EEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceee
Confidence 99986 999999999987775532 2357889999999994 268899999999998
Q ss_pred ccCCCCCCcccccCCEEEEEcCCCccCcCcEEEcccCCCCCCCCCceEEeeCCEEEEEceeeEeceEeeeEEEEecCCCC
Q 035526 448 IQTSPFPPCVIEYYPKLVSWARSHVPQLECWTKVSVHPDAPMDWSAAFVADRNHIFGVEMFKIFGQVLDFLTVCDVSEKW 527 (557)
Q Consensus 448 i~~~p~p~~~~~~~~~lv~~~gG~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~iyvvgG~~~~g~~~~~v~vy~~~d~~ 527 (557)
++.+|.|+ .++++++.+++|||+||++..+..+++++++ +.+
T Consensus 300 ~~~~p~~r-----------------------------------~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l---~~~ 341 (357)
T 2uvk_A 300 SGELSQGR-----------------------------------AYGVSLPWNNSLLIIGGETAGGKAVTDSVLI---TVK 341 (357)
T ss_dssp EEECSSCC-----------------------------------BSSEEEEETTEEEEEEEECGGGCEEEEEEEE---EC-
T ss_pred CCCCCCCc-----------------------------------ccceeEEeCCEEEEEeeeCCCCCEeeeEEEE---EEc
Confidence 87766554 2245567899999999998556678999988 666
Q ss_pred -CCceecccCCcCc
Q 035526 528 -MNWSHISRNHMDY 540 (557)
Q Consensus 528 -~~W~~i~~~~~~~ 540 (557)
++|....+.+-.|
T Consensus 342 ~~~~~~~~~~~~~~ 355 (357)
T 2uvk_A 342 DNKVTVQNLEHHHH 355 (357)
T ss_dssp CCSCEEEC------
T ss_pred CcEeEeeecccccc
Confidence 8998887766554
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=9.7e-35 Score=296.91 Aligned_cols=246 Identities=16% Similarity=0.235 Sum_probs=202.3
Q ss_pred cchhhhhhcccccccccCChhhhhhhhc--cccCCCeEEEEeeec----C--CcccceEEEeeCCCCceEEccCCCcCcc
Q 035526 158 TSLMNARLVCKKWRYLTTTPRFLQMRRE--GLHQNPWLFLFGAVK----D--GYYSGEIHALDVSQDQWHRIDASILKGR 229 (557)
Q Consensus 158 ~sl~~~~~vck~W~~l~~sp~~~~~~~~--~~~~~~~L~v~GG~~----~--~~~~~~v~~yd~~~~~W~~l~~~p~~~R 229 (557)
.++..+++..++|.. +..|.. ..|.. ....++.||++||.. . ....++++.||+.+++|..++++|.+ |
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r 89 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQ-VPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSP-R 89 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCC-SCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSC-E
T ss_pred CceEEECCCCCeEec-CCCCCC-CCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcc-h
Confidence 356678888999985 443321 11221 223488999999962 1 12345699999999999999999976 9
Q ss_pred eeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCC
Q 035526 230 FMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQS 309 (557)
Q Consensus 230 ~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~ 309 (557)
..|++++++++|||+||..... .....+++++|||.+++|+++++||.+|..+++++++ +
T Consensus 90 ~~~~~~~~~~~lyv~GG~~~~~--------~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~---------- 149 (315)
T 4asc_A 90 CLFGLGEALNSIYVVGGREIKD--------GERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHM--D---------- 149 (315)
T ss_dssp ESCEEEEETTEEEEECCEESST--------TCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET--T----------
T ss_pred hceeEEEECCEEEEEeCCcCCC--------CCcccceEEEECCCCCcEeECCCCCCcccceeEEEEC--C----------
Confidence 9999999999999999975310 0135789999999999999999999999998887765 3
Q ss_pred CCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc--cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCC
Q 035526 310 HQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG--SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWD 387 (557)
Q Consensus 310 ~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~--~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~ 387 (557)
++|++||... +...++.+++||+.+++|+. ++|.+|..|+++++++ +||++||.+...
T Consensus 150 ------~iyv~GG~~~---~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-----------~iyv~GG~~~~~ 209 (315)
T 4asc_A 150 ------LVYVIGGKGS---DRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDG-----------RIIVAAGVTDTG 209 (315)
T ss_dssp ------EEEEECCBCT---TSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT-----------EEEEEEEECSSS
T ss_pred ------EEEEEeCCCC---CCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECC-----------EEEEEeccCCCC
Confidence 8999999742 55678999999999999998 7888999999999987 999999987654
Q ss_pred CCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC---------------CeEEEEECCCCcEEec
Q 035526 388 EPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET---------------EKLAGYYIERGFWIGI 448 (557)
Q Consensus 388 ~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~---------------~~i~~YD~~~~~W~~i 448 (557)
.++++++||+.+++|+.++++|.+|..+++ ++++++|||+||. +++++||+++++|+.+
T Consensus 210 -~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 210 -LTSSAEVYSITDNKWAPFEAFPQERSSLSL-VSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp -EEEEEEEEETTTTEEEEECCCSSCCBSCEE-EEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred -ccceEEEEECCCCeEEECCCCCCcccceeE-EEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 678999999999999999999999998764 6779999999996 2588999999999988
No 12
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.8e-34 Score=292.43 Aligned_cols=249 Identities=17% Similarity=0.295 Sum_probs=214.1
Q ss_pred ccchhhhhhcccccccccCChhhhhhhhc--cccCCCeEEEEeeecCCcccceEEEeeCCCCc---eEEccCCCcCccee
Q 035526 157 LTSLMNARLVCKKWRYLTTTPRFLQMRRE--GLHQNPWLFLFGAVKDGYYSGEIHALDVSQDQ---WHRIDASILKGRFM 231 (557)
Q Consensus 157 ~~sl~~~~~vck~W~~l~~sp~~~~~~~~--~~~~~~~L~v~GG~~~~~~~~~v~~yd~~~~~---W~~l~~~p~~~R~~ 231 (557)
..++..+++..++|..+...|. .+.. ....++.||++||.......++++.||+.+++ |..++++|.+ |..
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~-r~~ 105 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITR---KRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR-RGL 105 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSS---CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC-CBS
T ss_pred eeEEEEEcCCCCeEEeCCCCCh---hhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC-ccc
Confidence 3567778888999999886663 2221 22348899999998766678899999999999 9999999976 999
Q ss_pred eEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCC
Q 035526 232 FSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQ 311 (557)
Q Consensus 232 ~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~ 311 (557)
|++++++++|||+||..+. ...+++++||+.+++|+++++||.+|..+++++++ +
T Consensus 106 ~~~~~~~~~lyv~GG~~~~-----------~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~------------ 160 (301)
T 2vpj_A 106 AGATTLGDMIYVSGGFDGS-----------RRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVAS--G------------ 160 (301)
T ss_dssp CEEEEETTEEEEECCBCSS-----------CBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEET--T------------
T ss_pred eeEEEECCEEEEEcccCCC-----------cccceEEEEcCCCCeEEECCCCCCCcccceEEEEC--C------------
Confidence 9999999999999998754 24679999999999999999999999998887764 3
Q ss_pred CCCCcEEEEcccccccCCCCcccceeeccccCCcccc--cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCC
Q 035526 312 DRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG--SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEP 389 (557)
Q Consensus 312 ~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~--~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~ 389 (557)
++|++||.+ +...++.+++||+.+++|+. ++|.+|..|+++..++ +||++||.+... .
T Consensus 161 ----~iyv~GG~~----~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~-----------~i~v~GG~~~~~-~ 220 (301)
T 2vpj_A 161 ----VIYCLGGYD----GLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLND-----------HIYVVGGFDGTA-H 220 (301)
T ss_dssp ----EEEEECCBC----SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT-----------EEEEECCBCSSS-B
T ss_pred ----EEEEECCCC----CCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECC-----------EEEEEeCCCCCc-c
Confidence 899999975 44578899999999999998 7888999999999986 999999987654 5
Q ss_pred CceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC------CeEEEEECCCCcEEeccCCCCCC
Q 035526 390 LDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET------EKLAGYYIERGFWIGIQTSPFPP 455 (557)
Q Consensus 390 l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~------~~i~~YD~~~~~W~~i~~~p~p~ 455 (557)
++++++||+.+++|+.++++|.++..+.+ ++++++||++||. +.++.||+++++|+.++.+|.|+
T Consensus 221 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r 291 (301)
T 2vpj_A 221 LSSVEAYNIRTDSWTTVTSMTTPRCYVGA-TVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQR 291 (301)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEE-EEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred cceEEEEeCCCCcEEECCCCCCcccceeE-EEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCccc
Confidence 78999999999999999999999988664 6779999999996 47999999999999999887765
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=5.8e-34 Score=291.53 Aligned_cols=244 Identities=17% Similarity=0.238 Sum_probs=198.1
Q ss_pred hhhhhhcccccccccCChh-hhhhhhccccCCCeEEEEeeecC---C---cccceEEEeeCCCCceEEccCCCcCcceee
Q 035526 160 LMNARLVCKKWRYLTTTPR-FLQMRREGLHQNPWLFLFGAVKD---G---YYSGEIHALDVSQDQWHRIDASILKGRFMF 232 (557)
Q Consensus 160 l~~~~~vck~W~~l~~sp~-~~~~~~~~~~~~~~L~v~GG~~~---~---~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~ 232 (557)
+..+++..++|... ..+. ...........++.||++||... + ...+.++.||+.+++|..++++|.+ |..|
T Consensus 26 ~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~ 103 (318)
T 2woz_A 26 AVAYDPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA-RCLF 103 (318)
T ss_dssp EEEEETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC-BCSC
T ss_pred eEEECCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc-cccc
Confidence 45678888999873 2221 11111122335889999999521 1 1234599999999999999999986 9999
Q ss_pred EEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCC
Q 035526 233 SVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQD 312 (557)
Q Consensus 233 s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~ 312 (557)
++++++++|||+||..... ....+++++||+.+++|+++++||.+|..+++++++ +
T Consensus 104 ~~~~~~~~iyv~GG~~~~~---------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--~------------- 159 (318)
T 2woz_A 104 GLGEVDDKIYVVAGKDLQT---------EASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHN--G------------- 159 (318)
T ss_dssp EEEEETTEEEEEEEEBTTT---------CCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEET--T-------------
T ss_pred ceEEECCEEEEEcCccCCC---------CcccceEEEEeCCCCCEeECCCCCCcccccEEEEEC--C-------------
Confidence 9999999999999986321 135689999999999999999999999998877754 3
Q ss_pred CCCcEEEEcccccccCCCCcccceeeccccCCcccc--cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCC
Q 035526 313 RRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG--SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPL 390 (557)
Q Consensus 313 ~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~--~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l 390 (557)
++|++||... +...++.+++||+.+++|+. ++|.+|..|+++++++ +||++||.+... .+
T Consensus 160 ---~iyv~GG~~~---~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-----------~iyv~GG~~~~~-~~ 221 (318)
T 2woz_A 160 ---MIYCLGGKTD---DKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKG-----------KIVIAGGVTEDG-LS 221 (318)
T ss_dssp ---EEEEECCEES---SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT-----------EEEEEEEEETTE-EE
T ss_pred ---EEEEEcCCCC---CCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECC-----------EEEEEcCcCCCC-cc
Confidence 8999999752 44568899999999999999 7888999999999886 999999987643 57
Q ss_pred ceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC---------------CeEEEEECCCCcEEec
Q 035526 391 DSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET---------------EKLAGYYIERGFWIGI 448 (557)
Q Consensus 391 ~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~---------------~~i~~YD~~~~~W~~i 448 (557)
+++++||+.+++|+.++++|.++..++ +++++++||++||. +++++||+++++|+.+
T Consensus 222 ~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 222 ASVEAFDLKTNKWEVMTEFPQERSSIS-LVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EEEEEEETTTCCEEECCCCSSCCBSCE-EEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred ceEEEEECCCCeEEECCCCCCcccceE-EEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 899999999999999999999998865 47789999999985 3688999999999988
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.98 E-value=5.3e-31 Score=273.51 Aligned_cols=242 Identities=9% Similarity=-0.030 Sum_probs=191.1
Q ss_pred EccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecC--CCcEEEcccCC-cCcccceEEEEe
Q 035526 220 RIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPL--TKSWWKVASMR-YARSMPILGISE 296 (557)
Q Consensus 220 ~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~--t~~W~~l~~m~-~~R~~~~~~v~~ 296 (557)
.+++||.+ |.++++++++++|||+||..+ +++++||+. +++|+++++|| .+|..+++++++
T Consensus 2 ~l~~lP~~-r~~~~~~~~~~~iyv~GG~~~---------------~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~ 65 (357)
T 2uvk_A 2 VLPETPVP-FKSGTGAIDNDTVYIGLGSAG---------------TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFID 65 (357)
T ss_dssp CSCCCSSC-CCSCEEEEETTEEEEECGGGT---------------TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEET
T ss_pred CCCCCCcc-ccceEEEEECCEEEEEeCcCC---------------CeEEEEccccCCCCeeECCCCCCCcCccceEEEEC
Confidence 46888876 888999999999999999653 379999998 49999999999 899998888775
Q ss_pred cCCCcccccccCCCCCCCCcEEEEccccc-ccCCCCcccceeeccccCCcccc--cCC-CCCCCceEEEeccchhhhhhc
Q 035526 297 VSPEFSIIPCHQSHQDRRFPRSRLGGVSD-VYEDPHRLSLRRQYRNSFDGFEG--SLL-PNRKSYKFIRQKSDQSIAKAS 372 (557)
Q Consensus 297 ~~g~~~~~~~~~~~~~~r~~lyv~GG~~~-~y~~~~~l~~v~~yd~~~~~W~~--~~~-~~r~~~~~~~~~~d~~~~~~~ 372 (557)
+ ++|++||... .-.....++.+++||+.+++|+. +++ .+|..|++++.++
T Consensus 66 --~----------------~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~-------- 119 (357)
T 2uvk_A 66 --G----------------NLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNG-------- 119 (357)
T ss_dssp --T----------------EEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETT--------
T ss_pred --C----------------EEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECC--------
Confidence 3 8999999721 11123568899999999999998 555 7899999988886
Q ss_pred cceEEEEEcccCCCC---------------------------------CCCceEEEEeCCCCcEEEccCCCCCCcCceEE
Q 035526 373 KRFVLIAVGGLGSWD---------------------------------EPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG 419 (557)
Q Consensus 373 ~~~~iyviGG~~~~~---------------------------------~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~ 419 (557)
+||++||.+... ..++++++||+.+++|+.++++|.++....++
T Consensus 120 ---~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~ 196 (357)
T 2uvk_A 120 ---KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAV 196 (357)
T ss_dssp ---EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEE
T ss_pred ---EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccE
Confidence 999999985421 14689999999999999999999876553455
Q ss_pred EEECCEEEEEecC-------CeEEEEEC--CCCcEEeccCCCCCCcccccCCEEEEEcCCCccCcCcEEEcccCCCCCCC
Q 035526 420 VVCNGIFYVYSET-------EKLAGYYI--ERGFWIGIQTSPFPPCVIEYYPKLVSWARSHVPQLECWTKVSVHPDAPMD 490 (557)
Q Consensus 420 vv~~g~lYv~GG~-------~~i~~YD~--~~~~W~~i~~~p~p~~~~~~~~~lv~~~gG~~~~~~~W~~v~~~p~~~~~ 490 (557)
++++++|||+||. +.++.||+ ++++|+.++.++.|+ ..
T Consensus 197 ~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~---------------------------------~~ 243 (357)
T 2uvk_A 197 VNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPD---------------------------------GV 243 (357)
T ss_dssp EEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTT---------------------------------CC
T ss_pred EEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCc---------------------------------cc
Confidence 7889999999994 47888876 888888888765544 23
Q ss_pred CCceEEeeCCEEEEEceeeEe----------------ceEeeeEEEEecCCCC-CCceecccCCcCccc
Q 035526 491 WSAAFVADRNHIFGVEMFKIF----------------GQVLDFLTVCDVSEKW-MNWSHISRNHMDYEL 542 (557)
Q Consensus 491 ~~~~~~~~~~~iyvvgG~~~~----------------g~~~~~v~vy~~~d~~-~~W~~i~~~~~~~~~ 542 (557)
.++++++.+++||++||.... ...+..+++| |++ ++|+.++.++..+..
T Consensus 244 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~y---d~~~~~W~~~~~~p~~r~~ 309 (357)
T 2uvk_A 244 AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIH---LWHNGKWDKSGELSQGRAY 309 (357)
T ss_dssp BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEE---ECC---CEEEEECSSCCBS
T ss_pred ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEE---ecCCCceeeCCCCCCCccc
Confidence 455677899999999998621 1235678999 888 999999999988765
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=1.2e-29 Score=286.96 Aligned_cols=260 Identities=14% Similarity=0.097 Sum_probs=201.8
Q ss_pred CCCeEEEEeeecCCcccceEEEeeCCCCceEEcc-C-----CCcCcceeeEEEEE--CCEEEEEcccCCCCCCccccCCc
Q 035526 189 QNPWLFLFGAVKDGYYSGEIHALDVSQDQWHRID-A-----SILKGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDGSS 260 (557)
Q Consensus 189 ~~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~-~-----~p~~~R~~~s~a~~--~~~IYViGG~~~~~~~~~~~~~~ 260 (557)
.++.||++||... ...+++++||+.+++|..++ + +|.+ |..|+++++ +++|||+||.+...
T Consensus 396 ~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~-R~~hs~~~~~~~~~lyv~GG~~~~~--------- 464 (695)
T 2zwa_A 396 AGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVA-RMCHTFTTISRNNQLLLIGGRKAPH--------- 464 (695)
T ss_dssp CSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCC-CBSCEEEEETTTTEEEEECCBSSTT---------
T ss_pred ECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCcc-ccceEEEEEccCCEEEEEcCCCCCC---------
Confidence 4889999999866 66789999999999999998 5 5655 999999999 99999999987642
Q ss_pred ccccceEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeecc
Q 035526 261 FKTHKRVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYR 340 (557)
Q Consensus 261 ~~~~~~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd 340 (557)
...+++|+||+.+++|+++++||.+|..++++++. ++ ++|++||.+. .. .+++||
T Consensus 465 -~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~-~~----------------~iyv~GG~~~----~~---~v~~yd 519 (695)
T 2zwa_A 465 -QGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLP-DG----------------NVLILGGVTE----GP---AMLLYN 519 (695)
T ss_dssp -CBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECT-TS----------------CEEEECCBCS----SC---SEEEEE
T ss_pred -CccccEEEEeCCCCcEEECCCCCCCcccceEEEEc-CC----------------EEEEECCCCC----CC---CEEEEE
Confidence 25678999999999999999999999998887752 23 8999999752 22 899999
Q ss_pred ccCCcccc--c---CCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCC-CCCceEEEEeCCCCc------EEEccC
Q 035526 341 NSFDGFEG--S---LLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWD-EPLDSGEIYDSVSNK------WMEIQR 408 (557)
Q Consensus 341 ~~~~~W~~--~---~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~-~~l~~ve~YD~~t~~------W~~v~~ 408 (557)
+.++.|+. + +|.+|..|++++++.+ .++||++||..... ..++++++||+.+++ |+.+.+
T Consensus 520 ~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~--------~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 520 VTEEIFKDVTPKDEFFQNSLVSAGLEFDPV--------SKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp TTTTEEEECCCSSGGGGSCCBSCEEEEETT--------TTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred CCCCceEEccCCCCCCCcccceeEEEEeCC--------CCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 99999998 3 7889999998877620 02999999985442 468999999999999 999987
Q ss_pred C-CCCCcCceEEEEEC-CEEEEEecC---------CeEEEEECCCCcEEeccCCCCCCcccccCCEEEEEcCCCccCcCc
Q 035526 409 L-PVDFGVVSSGVVCN-GIFYVYSET---------EKLAGYYIERGFWIGIQTSPFPPCVIEYYPKLVSWARSHVPQLEC 477 (557)
Q Consensus 409 l-p~~~~~~~~~vv~~-g~lYv~GG~---------~~i~~YD~~~~~W~~i~~~p~p~~~~~~~~~lv~~~gG~~~~~~~ 477 (557)
+ +.+|..+++ ++++ ++|||+||. +.++.||+++++|+.++ .|...
T Consensus 592 ~p~~~R~~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~---~p~~~-------------------- 647 (695)
T 2zwa_A 592 HPLFQRYGSQI-KYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIP---ISRRI-------------------- 647 (695)
T ss_dssp CGGGCCBSCEE-EEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECC---CCHHH--------------------
T ss_pred CCCCCcccceE-EEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEee---ccccc--------------------
Confidence 6 467777655 6667 999999994 47999999999999542 22210
Q ss_pred EEEcccCCCCCCCCCceEEeeCC-EEEEEceeeE---eceEeeeEEEE
Q 035526 478 WTKVSVHPDAPMDWSAAFVADRN-HIFGVEMFKI---FGQVLDFLTVC 521 (557)
Q Consensus 478 W~~v~~~p~~~~~~~~~~~~~~~-~iyvvgG~~~---~g~~~~~v~vy 521 (557)
|. . | .+...+++.++.++ +|||+||... +|...+.+..+
T Consensus 648 ~~--~--~-~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~l 690 (695)
T 2zwa_A 648 WE--D--H-SLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKL 690 (695)
T ss_dssp HH--H--S-CCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEE
T ss_pred cC--C--C-CccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEE
Confidence 00 0 1 12344555565555 9999999643 56666655555
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=3e-29 Score=282.12 Aligned_cols=303 Identities=11% Similarity=0.023 Sum_probs=216.9
Q ss_pred hhhhhhcccccccccCChhhhhhhhccc-cC-CCeEEEEeeecCCc------ccceEEEeeCCCCceEEccCCCcCccee
Q 035526 160 LMNARLVCKKWRYLTTTPRFLQMRREGL-HQ-NPWLFLFGAVKDGY------YSGEIHALDVSQDQWHRIDASILKGRFM 231 (557)
Q Consensus 160 l~~~~~vck~W~~l~~sp~~~~~~~~~~-~~-~~~L~v~GG~~~~~------~~~~v~~yd~~~~~W~~l~~~p~~~R~~ 231 (557)
...+++...+|..++..|. ...... .. ++.||++||..... ....+++||+.+++|..++.+|.+ |..
T Consensus 168 ~~~~dp~~~~W~~~~~~P~---~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~-~~~ 243 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPI---VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTK-HDM 243 (656)
T ss_dssp CCCCCTTSCEEEEEEECSS---CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECS-CCC
T ss_pred cccCCCCCCeeeeeccCCC---CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCC-CCC
Confidence 4456677789999887775 111222 22 88999999975421 245799999999999999988765 555
Q ss_pred eE--EEE-ECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccC
Q 035526 232 FS--VVS-IMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQ 308 (557)
Q Consensus 232 ~s--~a~-~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~ 308 (557)
|+ +++ .+++|||+||.... ++++|||.+++|+++++|+.+|..++++++. +|
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~---------------~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~-dg--------- 298 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAK---------------KTSLYDSSSDSWIPGPDMQVARGYQSSATMS-DG--------- 298 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTT---------------CEEEEEGGGTEEEECCCCSSCCSSCEEEECT-TS---------
T ss_pred ccccccCCCCCCEEEeCCCCCC---------------ceEEecCcCCceeECCCCCccccccceEEec-CC---------
Confidence 43 443 58999999996532 6999999999999999999999998777762 23
Q ss_pred CCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc-------cCCCCCCCceEEEeccchhhhhhccceEEEEEc
Q 035526 309 SHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-------SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVG 381 (557)
Q Consensus 309 ~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~-------~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviG 381 (557)
++|++||.. ++...++++++||+.+++|+. +++..+. ++++..++ ++|++|
T Consensus 299 -------~iyv~GG~~---~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~~~~~~~-----------~iyv~G 356 (656)
T 1k3i_A 299 -------RVFTIGGSW---SGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK-QGLYRSDN-----------HAWLFG 356 (656)
T ss_dssp -------CEEEECCCC---CSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT-TGGGTTTC-----------SCCEEE
T ss_pred -------eEEEEeCcc---cCCcccccceEeCCCCCcceeCCCccccccccccc-cceeecCC-----------ceEEEE
Confidence 899999943 244578899999999999987 2333433 24444444 899999
Q ss_pred ccCCCC---CCCceEEEEeCCCCcEEEccC-CCC------CCcCceEEEE---ECCEEEEEecCC------------eEE
Q 035526 382 GLGSWD---EPLDSGEIYDSVSNKWMEIQR-LPV------DFGVVSSGVV---CNGIFYVYSETE------------KLA 436 (557)
Q Consensus 382 G~~~~~---~~l~~ve~YD~~t~~W~~v~~-lp~------~~~~~~~~vv---~~g~lYv~GG~~------------~i~ 436 (557)
|.++.. .....++.||+.++.|..... .+. ++.. ++++. .+++|||+||.+ .++
T Consensus 357 g~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~-~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~ 435 (656)
T 1k3i_A 357 WKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMC-GNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIIT 435 (656)
T ss_dssp CGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBT-CEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEE
T ss_pred CCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCC-CceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEE
Confidence 986531 246899999999999886432 221 1222 23332 599999999942 577
Q ss_pred EEECCCCcEEecc--CCCCCCcccccCCEEEEEcCCCccCcCcEEEcccCCCCCCCCCceEEee-CCEEEEEceeeEe--
Q 035526 437 GYYIERGFWIGIQ--TSPFPPCVIEYYPKLVSWARSHVPQLECWTKVSVHPDAPMDWSAAFVAD-RNHIFGVEMFKIF-- 511 (557)
Q Consensus 437 ~YD~~~~~W~~i~--~~p~p~~~~~~~~~lv~~~gG~~~~~~~W~~v~~~p~~~~~~~~~~~~~-~~~iyvvgG~~~~-- 511 (557)
+||+++++|..+. .||.++ . .+++++. +++|||+||.+..
T Consensus 436 ~yd~~~~~W~~~~~~~mp~~R---------------------------------~--~~~~~~l~~g~i~v~GG~~~~~~ 480 (656)
T 1k3i_A 436 LGEPGTSPNTVFASNGLYFAR---------------------------------T--FHTSVVLPDGSTFITGGQRRGIP 480 (656)
T ss_dssp CCSTTSCCEEEECTTCCSSCC---------------------------------B--SCEEEECTTSCEEEECCBSBCCT
T ss_pred cCCCCCCCeeEEccCCCCCCc---------------------------------c--cCCeEECCCCCEEEECCcccCcC
Confidence 8888888888775 454443 1 2233444 9999999997621
Q ss_pred ---ceEeeeEEEEecCCCC-CCceecccCCcCcccCccceeeccc
Q 035526 512 ---GQVLDFLTVCDVSEKW-MNWSHISRNHMDYELDATSCMTKSL 552 (557)
Q Consensus 512 ---g~~~~~v~vy~~~d~~-~~W~~i~~~~~~~~~~~~sc~~~~~ 552 (557)
...+..+++| |++ ++|+.++.++..+..+.+++++...
T Consensus 481 ~~~~~~~~~v~~y---dp~t~~W~~~~~~~~~R~~hs~a~ll~dg 522 (656)
T 1k3i_A 481 FEDSTPVFTPEIY---VPEQDTFYKQNPNSIVRVYHSISLLLPDG 522 (656)
T ss_dssp TCCCSBCCCCEEE---EGGGTEEEECCCCSSCCCTTEEEEECTTS
T ss_pred cCCCCcccceEEE---cCCCCceeecCCCCCccccccHhhcCCCc
Confidence 2456889999 998 9999999999888775544443333
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.95 E-value=9.4e-27 Score=263.27 Aligned_cols=237 Identities=12% Similarity=0.038 Sum_probs=184.9
Q ss_pred ceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcc-c-----CCcCcccc
Q 035526 217 QWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVA-S-----MRYARSMP 290 (557)
Q Consensus 217 ~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~-~-----m~~~R~~~ 290 (557)
+|...+..|.+ |+++++ ++++.|||+||... . ..+++++|||.+++|+.++ + ||.+|..+
T Consensus 378 ~~~~~~~~p~r-r~g~~~-~~~~~iyv~GG~~~-~-----------~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~h 443 (695)
T 2zwa_A 378 QLLECECPINR-KFGDVD-VAGNDVFYMGGSNP-Y-----------RVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCH 443 (695)
T ss_dssp EEEECCCTTCC-BSCEEE-ECSSCEEEECCBSS-S-----------BCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSC
T ss_pred eEeccCCCCCC-ceeEEE-EECCEEEEECCCCC-C-----------CcCcEEEEECCCCeEEEeccCCCCCCCCccccce
Confidence 45555554543 666544 48999999999765 2 4578999999999999998 6 88999998
Q ss_pred eEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc--cCCCCCCCceEEEe-ccchh
Q 035526 291 ILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG--SLLPNRKSYKFIRQ-KSDQS 367 (557)
Q Consensus 291 ~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~--~~~~~r~~~~~~~~-~~d~~ 367 (557)
+++++..++ ++|++||.+. ....++++++||+.+++|+. ++|.+|..|+++++ ++
T Consensus 444 s~~~~~~~~----------------~lyv~GG~~~---~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~--- 501 (695)
T 2zwa_A 444 TFTTISRNN----------------QLLLIGGRKA---PHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDG--- 501 (695)
T ss_dssp EEEEETTTT----------------EEEEECCBSS---TTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTS---
T ss_pred EEEEEccCC----------------EEEEEcCCCC---CCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCC---
Confidence 888872123 8999999862 22368899999999999998 88899999999997 65
Q ss_pred hhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccC---CCCCCcCceEEEEEC---CEEEEEecC--------C
Q 035526 368 IAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQR---LPVDFGVVSSGVVCN---GIFYVYSET--------E 433 (557)
Q Consensus 368 ~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~---lp~~~~~~~~~vv~~---g~lYv~GG~--------~ 433 (557)
+||++||.+... ++++||+.+++|+.+++ +|.++..+++ ++++ ++|||+||. +
T Consensus 502 --------~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a-~v~~~~~~~iyv~GG~~~~~~~~~~ 568 (695)
T 2zwa_A 502 --------NVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNSLVSAG-LEFDPVSKQGIILGGGFMDQTTVSD 568 (695)
T ss_dssp --------CEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSCCBSCE-EEEETTTTEEEEECCBCTTSSCBCC
T ss_pred --------EEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCcccceeE-EEEeCCCCEEEEECCcCCCCCeeeC
Confidence 999999987653 89999999999999986 8889988765 4446 899999996 4
Q ss_pred eEEEEECCCCcEEeccCCCCCCcccccCCEEEEEcCCCccCcCcEEEcccCCCCCCCCCceEEeeC-CEEEEEceeeEec
Q 035526 434 KLAGYYIERGFWIGIQTSPFPPCVIEYYPKLVSWARSHVPQLECWTKVSVHPDAPMDWSAAFVADR-NHIFGVEMFKIFG 512 (557)
Q Consensus 434 ~i~~YD~~~~~W~~i~~~p~p~~~~~~~~~lv~~~gG~~~~~~~W~~v~~~p~~~~~~~~~~~~~~-~~iyvvgG~~~~g 512 (557)
.+++||+.+++| .+ ..+|+++..+|..+ +.++++++.+ ++||++||++..+
T Consensus 569 ~v~~yd~~~~~w-~~--------------------------~~~W~~~~~~p~~~-R~~~~~~~~~~~~iyv~GG~~~~~ 620 (695)
T 2zwa_A 569 KAIIFKYDAENA-TE--------------------------PITVIKKLQHPLFQ-RYGSQIKYITPRKLLIVGGTSPSG 620 (695)
T ss_dssp EEEEEEECTTCS-SC--------------------------CEEEEEEEECGGGC-CBSCEEEEEETTEEEEECCBCSSC
T ss_pred cEEEEEccCCcc-cc--------------------------ceEEEEcCCCCCCC-cccceEEEeCCCEEEEECCccCCC
Confidence 799999999997 21 23577776654222 2345556677 9999999986222
Q ss_pred --eEeeeEEEEecCCCC-CCceec
Q 035526 513 --QVLDFLTVCDVSEKW-MNWSHI 533 (557)
Q Consensus 513 --~~~~~v~vy~~~d~~-~~W~~i 533 (557)
...+.+++| |++ ++|+.+
T Consensus 621 ~~~~~~~v~~y---d~~t~~W~~~ 641 (695)
T 2zwa_A 621 LFDRTNSIISL---DPLSETLTSI 641 (695)
T ss_dssp CCCTTTSEEEE---ETTTTEEEEC
T ss_pred CCCCCCeEEEE---ECCCCeEEEe
Confidence 247889999 999 999854
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.94 E-value=7.5e-27 Score=262.55 Aligned_cols=285 Identities=14% Similarity=0.021 Sum_probs=200.9
Q ss_pred chhhhhhcccccccccCChhhhhhhhc-cc-cCCCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEE
Q 035526 159 SLMNARLVCKKWRYLTTTPRFLQMRRE-GL-HQNPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVS 236 (557)
Q Consensus 159 sl~~~~~vck~W~~l~~sp~~~~~~~~-~~-~~~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~ 236 (557)
.+..+++...+|..+...|.-...+.. .. ..++.||++||.... ++++||+.+++|..+++||.+ |..|++++
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~~~~~-R~~~s~~~ 294 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPDMQVA-RGYQSSAT 294 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCCCSSC-CSSCEEEE
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCCCCcc-ccccceEE
Confidence 566778888999988755431111111 11 247899999997542 799999999999999999886 99999999
Q ss_pred E-CCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEc-----ccCCcCcccceEEEEecCCCcccccccCCC
Q 035526 237 I-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKV-----ASMRYARSMPILGISEVSPEFSIIPCHQSH 310 (557)
Q Consensus 237 ~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l-----~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~ 310 (557)
+ +++|||+||..... ...+++++|||.+++|+.+ +||+.+|.. +++..++
T Consensus 295 ~~dg~iyv~GG~~~~~----------~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~---~~~~~~~----------- 350 (656)
T 1k3i_A 295 MSDGRVFTIGGSWSGG----------VFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ---GLYRSDN----------- 350 (656)
T ss_dssp CTTSCEEEECCCCCSS----------SCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT---GGGTTTC-----------
T ss_pred ecCCeEEEEeCcccCC----------cccccceEeCCCCCcceeCCCcccccccccccc---ceeecCC-----------
Confidence 9 99999999953221 2467899999999999997 566666543 2222223
Q ss_pred CCCCCcEEEEcccccccCCCCcccceeeccccCCcccccCCC---------CCCCceEEE---eccchhhhhhccceEEE
Q 035526 311 QDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLP---------NRKSYKFIR---QKSDQSIAKASKRFVLI 378 (557)
Q Consensus 311 ~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~~~~~---------~r~~~~~~~---~~~d~~~~~~~~~~~iy 378 (557)
++|++||.+...-.....+.++.||+..+.|..++.. .+..+.++. .++ +||
T Consensus 351 -----~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~-----------~i~ 414 (656)
T 1k3i_A 351 -----HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKG-----------KIL 414 (656)
T ss_dssp -----SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTT-----------EEE
T ss_pred -----ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCC-----------eEE
Confidence 8999998752100112467889999999999873322 233444443 243 999
Q ss_pred EEcccCCCC--CCCc---eEEEEeCCCCcEEEcc--CCCCCCcCceEEEEECCEEEEEecC------------CeEEEEE
Q 035526 379 AVGGLGSWD--EPLD---SGEIYDSVSNKWMEIQ--RLPVDFGVVSSGVVCNGIFYVYSET------------EKLAGYY 439 (557)
Q Consensus 379 viGG~~~~~--~~l~---~ve~YD~~t~~W~~v~--~lp~~~~~~~~~vv~~g~lYv~GG~------------~~i~~YD 439 (557)
++||.+... ..++ .+++||+.+++|+.+. +||.+|..+.++++.+|+|||+||. +.++.||
T Consensus 415 v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~yd 494 (656)
T 1k3i_A 415 TFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYV 494 (656)
T ss_dssp EECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEE
T ss_pred EEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEc
Confidence 999974321 2344 8999999999999986 8999998876544449999999994 3688999
Q ss_pred CCCCcEEeccCCCCCCcccccCCEEEEEcCCCccCcCcEEEcccCCCCCCCCCceEEeeCCEEEEEceeeEec--eEeee
Q 035526 440 IERGFWIGIQTSPFPPCVIEYYPKLVSWARSHVPQLECWTKVSVHPDAPMDWSAAFVADRNHIFGVEMFKIFG--QVLDF 517 (557)
Q Consensus 440 ~~~~~W~~i~~~p~p~~~~~~~~~lv~~~gG~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~iyvvgG~~~~g--~~~~~ 517 (557)
+++++|+.++.++.|+ ..++++++..+++||++||....+ ...-.
T Consensus 495 p~t~~W~~~~~~~~~R---------------------------------~~hs~a~ll~dg~v~v~GG~~~~~~~~~~~~ 541 (656)
T 1k3i_A 495 PEQDTFYKQNPNSIVR---------------------------------VYHSISLLLPDGRVFNGGGGLCGDCTTNHFD 541 (656)
T ss_dssp GGGTEEEECCCCSSCC---------------------------------CTTEEEEECTTSCEEEEECCCCTTCSCCCCE
T ss_pred CCCCceeecCCCCCcc---------------------------------ccccHhhcCCCcEEEecCCCCCCCCCCCeeE
Confidence 9999998888766555 233333334489999999964221 11234
Q ss_pred EEEE
Q 035526 518 LTVC 521 (557)
Q Consensus 518 v~vy 521 (557)
+++|
T Consensus 542 ~e~~ 545 (656)
T 1k3i_A 542 AQIF 545 (656)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6777
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.15 E-value=0.0004 Score=72.65 Aligned_cols=41 Identities=22% Similarity=0.404 Sum_probs=36.2
Q ss_pred cCCCCCCCHHHHHHHHhcCCccchhhhhhcccccccccCCh
Q 035526 137 SRMHIFLPDDTLEMCLVRFPLTSLMNARLVCKKWRYLTTTP 177 (557)
Q Consensus 137 ~r~~~~lp~dl~~~il~rLP~~sl~~~~~vck~W~~l~~sp 177 (557)
.-+...||+|++..||..|+..+|.++..|||+|+.++..+
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~ 56 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDN 56 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCS
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCch
Confidence 34567899999999999999999999999999998877654
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.00 E-value=0.00095 Score=69.69 Aligned_cols=36 Identities=36% Similarity=0.494 Sum_probs=32.0
Q ss_pred CCCCCHH----HHHHHHhcCCccchhhhhhcccccccccC
Q 035526 140 HIFLPDD----TLEMCLVRFPLTSLMNARLVCKKWRYLTT 175 (557)
Q Consensus 140 ~~~lp~d----l~~~il~rLP~~sl~~~~~vck~W~~l~~ 175 (557)
+..||+| |+..||+.|+..+|.++..|||+|+.++.
T Consensus 11 ~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~ 50 (435)
T 1p22_A 11 ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTS 50 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHH
T ss_pred HHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc
Confidence 3468999 99999999999999999999999986664
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.76 E-value=0.0014 Score=68.65 Aligned_cols=38 Identities=13% Similarity=0.222 Sum_probs=35.0
Q ss_pred CCCCCCHHHHHHHHhcCCccchhhhhhcccccccccCC
Q 035526 139 MHIFLPDDTLEMCLVRFPLTSLMNARLVCKKWRYLTTT 176 (557)
Q Consensus 139 ~~~~lp~dl~~~il~rLP~~sl~~~~~vck~W~~l~~s 176 (557)
++..||+|++..||+.||..+|.++..|||+|+.++..
T Consensus 14 ~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp HHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred ChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 34579999999999999999999999999999998876
No 22
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.71 E-value=0.0086 Score=60.21 Aligned_cols=179 Identities=8% Similarity=-0.114 Sum_probs=107.2
Q ss_pred cceEEEeeCCCCceEEcc-----CCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEE-
Q 035526 205 SGEIHALDVSQDQWHRID-----ASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWW- 278 (557)
Q Consensus 205 ~~~v~~yd~~~~~W~~l~-----~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~- 278 (557)
...+..||+.++++..-- ..+. +.....++..++++||.... .+.+.++|+.|.+-.
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~l-g~~~~~i~~~~~~lyv~~~~----------------~~~v~viD~~t~~~~~ 78 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKL-GDVAQSMVIRDGIGWIVVNN----------------SHVIFAIDINTFKEVG 78 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCC-BSCEEEEEEETTEEEEEEGG----------------GTEEEEEETTTCCEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCccc-CccceEEEEECCEEEEEEcC----------------CCEEEEEECcccEEEE
Confidence 567999999998875421 1122 23345677789999999752 247999999988763
Q ss_pred EcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccccCCCCC----
Q 035526 279 KVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPNR---- 354 (557)
Q Consensus 279 ~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~~~~~~r---- 354 (557)
.++....|+. ++ +..++ ++|+.... .+.+.++|+.+.+-....+...
T Consensus 79 ~i~~~~~p~~---i~-~~~~g----------------~lyv~~~~---------~~~v~~iD~~t~~~~~~i~~g~~~~~ 129 (328)
T 3dsm_A 79 RITGFTSPRY---IH-FLSDE----------------KAYVTQIW---------DYRIFIINPKTYEITGYIECPDMDME 129 (328)
T ss_dssp EEECCSSEEE---EE-EEETT----------------EEEEEEBS---------CSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred EcCCCCCCcE---EE-EeCCC----------------eEEEEECC---------CCeEEEEECCCCeEEEEEEcCCcccc
Confidence 3543322221 22 21233 67777632 1456678887766443222222
Q ss_pred --CCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC
Q 035526 355 --KSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET 432 (557)
Q Consensus 355 --~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~ 432 (557)
....++..++ ++|+..- + .-+.+.++|+.+++....-+.... -......-+|++|+....
T Consensus 130 ~~~p~~i~~~~~-----------~lyv~~~-~----~~~~v~viD~~t~~~~~~i~~g~~--p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 130 SGSTEQMVQYGK-----------YVYVNCW-S----YQNRILKIDTETDKVVDELTIGIQ--PTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp TCBCCCEEEETT-----------EEEEEEC-T----TCCEEEEEETTTTEEEEEEECSSC--BCCCEECTTSEEEEEBCC
T ss_pred CCCcceEEEECC-----------EEEEEcC-C----CCCEEEEEECCCCeEEEEEEcCCC--ccceEEcCCCCEEEEECC
Confidence 3344554443 8998852 0 135799999999876543222211 112223447899988642
Q ss_pred -----------CeEEEEECCCCcEEe
Q 035526 433 -----------EKLAGYYIERGFWIG 447 (557)
Q Consensus 433 -----------~~i~~YD~~~~~W~~ 447 (557)
+.+.++|+++++...
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred CccCCccccCCceEEEEECCCCeEEE
Confidence 589999999887653
No 23
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=97.48 E-value=4.5e-05 Score=55.74 Aligned_cols=42 Identities=26% Similarity=0.377 Sum_probs=37.3
Q ss_pred CCCCCCCHHHHHHHHhcCCccchhhhhhcccccccccCChhh
Q 035526 138 RMHIFLPDDTLEMCLVRFPLTSLMNARLVCKKWRYLTTTPRF 179 (557)
Q Consensus 138 r~~~~lp~dl~~~il~rLP~~sl~~~~~vck~W~~l~~sp~~ 179 (557)
..+..||+|++..||.+||..++.++..|||+|+.++..+.+
T Consensus 7 ~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~l 48 (53)
T 1fs1_A 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (53)
T ss_dssp --CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGG
T ss_pred CCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHH
Confidence 346689999999999999999999999999999999988764
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.20 E-value=0.055 Score=52.31 Aligned_cols=157 Identities=12% Similarity=-0.047 Sum_probs=99.2
Q ss_pred ceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccC
Q 035526 229 RFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQ 308 (557)
Q Consensus 229 R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~ 308 (557)
-+-.++...++.||+..|..+. +.+.++|+.|++=..--+++.. .++.++...++
T Consensus 21 ~ftqGL~~~~~~LyestG~~g~--------------S~v~~vD~~tgkv~~~~~l~~~--~fgeGi~~~~~--------- 75 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETGR--------------SSVRKVDLETGRILQRAEVPPP--YFGAGIVAWRD--------- 75 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTTS--------------CEEEEEETTTCCEEEEEECCTT--CCEEEEEEETT---------
T ss_pred cccccEEEECCEEEEECCCCCC--------------ceEEEEECCCCCEEEEEeCCCC--cceeEEEEeCC---------
Confidence 3445788889999999997653 4799999999977654444432 23344443333
Q ss_pred CCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccccCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCC
Q 035526 309 SHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDE 388 (557)
Q Consensus 309 ~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~ 388 (557)
++|++... -+.+..||+.+-+-....+.+..+.+++.-+. ++|+.-|.
T Consensus 76 -------~ly~ltw~---------~~~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~-----------~L~vSdgs----- 123 (243)
T 3mbr_X 76 -------RLIQLTWR---------NHEGFVYDLATLTPRARFRYPGEGWALTSDDS-----------HLYMSDGT----- 123 (243)
T ss_dssp -------EEEEEESS---------SSEEEEEETTTTEEEEEEECSSCCCEEEECSS-----------CEEEECSS-----
T ss_pred -------EEEEEEee---------CCEEEEEECCcCcEEEEEeCCCCceEEeeCCC-----------EEEEECCC-----
Confidence 78887543 24566788776554443333345556654443 88888762
Q ss_pred CCceEEEEeCCCCcEEEc---cCCCCCCcCceEEEEECCEEEEEe-cCCeEEEEECCCCc
Q 035526 389 PLDSGEIYDSVSNKWMEI---QRLPVDFGVVSSGVVCNGIFYVYS-ETEKLAGYYIERGF 444 (557)
Q Consensus 389 ~l~~ve~YD~~t~~W~~v---~~lp~~~~~~~~~vv~~g~lYv~G-G~~~i~~YD~~~~~ 444 (557)
+.+..+||++.+=..- ..-+.+..........+|+||+-- ..+.|.+.|+++++
T Consensus 124 --~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 124 --AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGK 181 (243)
T ss_dssp --SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCB
T ss_pred --CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCC
Confidence 4689999999754322 112222222122344599999866 46799999999876
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.17 E-value=0.048 Score=54.62 Aligned_cols=192 Identities=11% Similarity=-0.059 Sum_probs=109.6
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCce-EEccCCCcCcceeeEEEE-ECCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQW-HRIDASILKGRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W-~~l~~~p~~~R~~~s~a~-~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
++.+|+.... .+.+..+|+.+.+- .+++.... ...++. .++++||.... ...+
T Consensus 53 ~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~~~~----p~~i~~~~~g~lyv~~~~----------------~~~v 107 (328)
T 3dsm_A 53 DGIGWIVVNN-----SHVIFAIDINTFKEVGRITGFTS----PRYIHFLSDEKAYVTQIW----------------DYRI 107 (328)
T ss_dssp TTEEEEEEGG-----GTEEEEEETTTCCEEEEEECCSS----EEEEEEEETTEEEEEEBS----------------CSEE
T ss_pred CCEEEEEEcC-----CCEEEEEECcccEEEEEcCCCCC----CcEEEEeCCCeEEEEECC----------------CCeE
Confidence 5678877642 35789999998876 44543222 234444 68899998742 2379
Q ss_pred EEEecCCCcEEEcccCCc--Cc--ccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccC
Q 035526 268 LVFSPLTKSWWKVASMRY--AR--SMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSF 343 (557)
Q Consensus 268 ~~ydp~t~~W~~l~~m~~--~R--~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~ 343 (557)
.++|+.+++-...-+... .+ .-..+++ .++ ++|+..- ...+.+.++|+.+
T Consensus 108 ~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~----------------~lyv~~~--------~~~~~v~viD~~t 161 (328)
T 3dsm_A 108 FIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGK----------------YVYVNCW--------SYQNRILKIDTET 161 (328)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETT----------------EEEEEEC--------TTCCEEEEEETTT
T ss_pred EEEECCCCeEEEEEEcCCccccCCCcceEEE--ECC----------------EEEEEcC--------CCCCEEEEEECCC
Confidence 999999987543212111 00 1112233 223 6777641 0124567788887
Q ss_pred CcccccCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCC----CceEEEEeCCCCcEEEccCCCCCCcCceEE
Q 035526 344 DGFEGSLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEP----LDSGEIYDSVSNKWMEIQRLPVDFGVVSSG 419 (557)
Q Consensus 344 ~~W~~~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~----l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~ 419 (557)
++.....+.......++.-. .+++|+....+..... ...+.++|+.+++....-.+|.... ....
T Consensus 162 ~~~~~~i~~g~~p~~i~~~~----------dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~-p~~l 230 (328)
T 3dsm_A 162 DKVVDELTIGIQPTSLVMDK----------YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDW-PSEV 230 (328)
T ss_dssp TEEEEEEECSSCBCCCEECT----------TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCC-CEEE
T ss_pred CeEEEEEEcCCCccceEEcC----------CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCC-ceeE
Confidence 76555322222233333322 2488887643211101 3689999999988664433443221 1223
Q ss_pred EEE--CCEEEEEecCCeEEEEECCCCcE
Q 035526 420 VVC--NGIFYVYSETEKLAGYYIERGFW 445 (557)
Q Consensus 420 vv~--~g~lYv~GG~~~i~~YD~~~~~W 445 (557)
++. ++.||+..+ .+..||+++++.
T Consensus 231 a~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 231 QLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp EECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred EEecCCCEEEEEcc--EEEEEECCCCce
Confidence 443 577888776 899999988764
No 26
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=96.94 E-value=0.00028 Score=70.43 Aligned_cols=46 Identities=28% Similarity=0.509 Sum_probs=41.6
Q ss_pred CCCCCCHHHHHHHHhcCCccchh-hhhhcccccccccCChhhhhhhh
Q 035526 139 MHIFLPDDTLEMCLVRFPLTSLM-NARLVCKKWRYLTTTPRFLQMRR 184 (557)
Q Consensus 139 ~~~~lp~dl~~~il~rLP~~sl~-~~~~vck~W~~l~~sp~~~~~~~ 184 (557)
.+..||+||+.+||.+||..+|. ++++|||+|+.|+.+|.|...+.
T Consensus 50 ~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~ 96 (297)
T 2e31_A 50 YLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKC 96 (297)
T ss_dssp CTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHh
Confidence 45689999999999999999999 99999999999999998876544
No 27
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.92 E-value=0.42 Score=48.18 Aligned_cols=259 Identities=13% Similarity=0.095 Sum_probs=131.2
Q ss_pred CCCeEEEEeeecCCcccceEEEeeCCCCc--eEEccCCCc------CcceeeEEEEECCEEEEEcccCCCCCCccccCCc
Q 035526 189 QNPWLFLFGAVKDGYYSGEIHALDVSQDQ--WHRIDASIL------KGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSS 260 (557)
Q Consensus 189 ~~~~L~v~GG~~~~~~~~~v~~yd~~~~~--W~~l~~~p~------~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~ 260 (557)
.++.||+... ...+++||+.+++ |..-..... ......+.+..++.||+...
T Consensus 52 ~~~~v~~~~~------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------------- 111 (376)
T 3q7m_A 52 ADNVVYAADR------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-------------- 111 (376)
T ss_dssp ETTEEEEECT------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET--------------
T ss_pred ECCEEEEEcC------CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC--------------
Confidence 3677777643 2368999998765 765332110 11334456677889998543
Q ss_pred ccccceEEEEecCCCc--EEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceee
Q 035526 261 FKTHKRVLVFSPLTKS--WWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQ 338 (557)
Q Consensus 261 ~~~~~~v~~ydp~t~~--W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~ 338 (557)
...++.||+.|++ |+.-.+-. ....+ .+.+ + .+|+..+. ..+..
T Consensus 112 ---~g~l~a~d~~tG~~~W~~~~~~~-~~~~p--~~~~--~----------------~v~v~~~~----------g~l~~ 157 (376)
T 3q7m_A 112 ---KAQVYALNTSDGTVAWQTKVAGE-ALSRP--VVSD--G----------------LVLIHTSN----------GQLQA 157 (376)
T ss_dssp ---TSEEEEEETTTCCEEEEEECSSC-CCSCC--EEET--T----------------EEEEECTT----------SEEEE
T ss_pred ---CCEEEEEECCCCCEEEEEeCCCc-eEcCC--EEEC--C----------------EEEEEcCC----------CeEEE
Confidence 1379999998874 76432211 11111 1211 2 34443221 23455
Q ss_pred ccccCCc--ccccCCCC----CCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCC--cEEEccCCC
Q 035526 339 YRNSFDG--FEGSLLPN----RKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLP 410 (557)
Q Consensus 339 yd~~~~~--W~~~~~~~----r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~--~W~~v~~lp 410 (557)
||+.+.+ |+...+.+ +.....+..++ .||+ |.. -..+..||+.++ .|+.-...|
T Consensus 158 ~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-----------~v~~-g~~------~g~l~~~d~~tG~~~w~~~~~~~ 219 (376)
T 3q7m_A 158 LNEADGAVKWTVNLDMPSLSLRGESAPTTAFG-----------AAVV-GGD------NGRVSAVLMEQGQMIWQQRISQA 219 (376)
T ss_dssp EETTTCCEEEEEECCC-----CCCCCCEEETT-----------EEEE-CCT------TTEEEEEETTTCCEEEEEECCC-
T ss_pred EECCCCcEEEEEeCCCCceeecCCCCcEEECC-----------EEEE-EcC------CCEEEEEECCCCcEEEEEecccC
Confidence 7765554 65522211 11122233333 6665 322 236889998876 587654333
Q ss_pred CCC-------cCceEEEEECCEEEEEecCCeEEEEECCCC--cEEeccCCCCCCcccccCCEEEEEcC-CC----ccC--
Q 035526 411 VDF-------GVVSSGVVCNGIFYVYSETEKLAGYYIERG--FWIGIQTSPFPPCVIEYYPKLVSWAR-SH----VPQ-- 474 (557)
Q Consensus 411 ~~~-------~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~--~W~~i~~~p~p~~~~~~~~~lv~~~g-G~----~~~-- 474 (557)
... ......++.++.+|+.+....+.++|++++ .|+.-.. .........+.+++... |. +++
T Consensus 220 ~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~--~~~~~~~~~~~l~~~~~~g~l~~~d~~tG 297 (376)
T 3q7m_A 220 TGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG--SVNDFIVDGNRIYLVDQNDRVMALTIDGG 297 (376)
T ss_dssp ----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC--CEEEEEEETTEEEEEETTCCEEEEETTTC
T ss_pred CCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC--CCCCceEECCEEEEEcCCCeEEEEECCCC
Confidence 211 011223567999999886678999999876 4765322 11111223444544332 22 222
Q ss_pred cCcEEEcccCCCCCCCCCceEEeeCCEEEEEceeeEeceEeeeEEEEecCCCCCCcee
Q 035526 475 LECWTKVSVHPDAPMDWSAAFVADRNHIFGVEMFKIFGQVLDFLTVCDVSEKWMNWSH 532 (557)
Q Consensus 475 ~~~W~~v~~~p~~~~~~~~~~~~~~~~iyvvgG~~~~g~~~~~v~vy~~~d~~~~W~~ 532 (557)
...|+.-. ++. ......+..++.||+... -..+.+++..+.+..|+.
T Consensus 298 ~~~w~~~~-~~~---~~~~~~~~~~~~l~v~~~-------~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 298 VTLWTQSD-LLH---RLLTSPVLYNGNLVVGDS-------EGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp CEEEEECT-TTT---SCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEE
T ss_pred cEEEeecc-cCC---CcccCCEEECCEEEEEeC-------CCeEEEEECCCCcEEEEE
Confidence 44687541 111 111233457888884321 134667744444455754
No 28
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.63 E-value=0.14 Score=50.07 Aligned_cols=156 Identities=12% Similarity=-0.016 Sum_probs=96.0
Q ss_pred eeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCC
Q 035526 230 FMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQS 309 (557)
Q Consensus 230 ~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~ 309 (557)
+..++...++.||+..|..+. +.+.++|+.|++=..--+++ ...++.++...++
T Consensus 44 ftqGL~~~~~~LyestG~~g~--------------S~v~~vD~~Tgkv~~~~~l~--~~~FgeGit~~g~---------- 97 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNGR--------------SSIRKVDIESGKTLQQIELG--KRYFGEGISDWKD---------- 97 (262)
T ss_dssp EEEEEEEETTEEEEEEEETTE--------------EEEEEECTTTCCEEEEEECC--TTCCEEEEEEETT----------
T ss_pred ccceEEEECCEEEEECCCCCC--------------ceEEEEECCCCcEEEEEecC--CccceeEEEEeCC----------
Confidence 445677779999999996653 47999999999765433443 2334444444333
Q ss_pred CCCCCCcEEEEcccccccCCCCcccceeeccccCCcccccCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCC
Q 035526 310 HQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEP 389 (557)
Q Consensus 310 ~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~ 389 (557)
++|++... -+.+..||+.+.+-....+.+..+.+++.-+. ++|+.-|.
T Consensus 98 ------~ly~ltw~---------~~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~-----------~L~~SdGs------ 145 (262)
T 3nol_A 98 ------KIVGLTWK---------NGLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQ-----------YLIMSDGT------ 145 (262)
T ss_dssp ------EEEEEESS---------SSEEEEEETTTCCEEEEEECSSCCCCEEECSS-----------CEEECCSS------
T ss_pred ------EEEEEEee---------CCEEEEEECccCcEEEEEECCCCceEEecCCC-----------EEEEECCC------
Confidence 78887542 24566788876654443333334555554332 78887652
Q ss_pred CceEEEEeCCCCcEEEccCC---CCCCcCceEEEEECCEEEEEec-CCeEEEEECCCCc
Q 035526 390 LDSGEIYDSVSNKWMEIQRL---PVDFGVVSSGVVCNGIFYVYSE-TEKLAGYYIERGF 444 (557)
Q Consensus 390 l~~ve~YD~~t~~W~~v~~l---p~~~~~~~~~vv~~g~lYv~GG-~~~i~~YD~~~~~ 444 (557)
+.+..+||++.+=..--.. +.+..........+|+||+--. .+.|.+.|+++++
T Consensus 146 -~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~ 203 (262)
T 3nol_A 146 -PVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGK 203 (262)
T ss_dssp -SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCB
T ss_pred -CeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCc
Confidence 4699999998754322112 1121211112345999998663 5799999999876
No 29
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.54 E-value=0.2 Score=50.34 Aligned_cols=188 Identities=11% Similarity=0.008 Sum_probs=98.0
Q ss_pred CeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CC-EEEEEcccCCCCCCccccCCcccccceEE
Q 035526 191 PWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MD-DVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 191 ~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~-~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
+.+|+.++.+ ..+..+|..+++-...-.... .-.+++.. ++ .||+.|+.+ ..+.
T Consensus 2 ~~l~vs~~~d-----~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~d----------------~~i~ 57 (391)
T 1l0q_A 2 TFAYIANSES-----DNISVIDVTSNKVTATIPVGS---NPMGAVISPDGTKVYVANAHS----------------NDVS 57 (391)
T ss_dssp EEEEEEETTT-----TEEEEEETTTTEEEEEEECSS---SEEEEEECTTSSEEEEEEGGG----------------TEEE
T ss_pred CEEEEEcCCC-----CEEEEEECCCCeEEEEeecCC---CcceEEECCCCCEEEEECCCC----------------CeEE
Confidence 3567776532 468899998876543222211 12334433 33 577777533 3789
Q ss_pred EEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc
Q 035526 269 VFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (557)
Q Consensus 269 ~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~ 348 (557)
+||+.+++-...-+... ......+..++ ..+|+.|..+ ..+..||...++-..
T Consensus 58 v~d~~~~~~~~~~~~~~---~v~~~~~spdg---------------~~l~~~~~~~---------~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 58 IIDTATNNVIATVPAGS---SPQGVAVSPDG---------------KQVYVTNMAS---------STLSVIDTTSNTVAG 110 (391)
T ss_dssp EEETTTTEEEEEEECSS---SEEEEEECTTS---------------SEEEEEETTT---------TEEEEEETTTTEEEE
T ss_pred EEECCCCeEEEEEECCC---CccceEECCCC---------------CEEEEEECCC---------CEEEEEECCCCeEEE
Confidence 99998887654333222 11122222222 1345554321 346677777655433
Q ss_pred cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-E-CCEE
Q 035526 349 SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-C-NGIF 426 (557)
Q Consensus 349 ~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~-~g~l 426 (557)
..........++...+ ...||+.++.+ ..+.+||+.+++....-.... .. ...++ - +..|
T Consensus 111 ~~~~~~~~~~~~~s~d---------g~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~--~~-~~~~~~~dg~~l 172 (391)
T 1l0q_A 111 TVKTGKSPLGLALSPD---------GKKLYVTNNGD------KTVSVINTVTKAVINTVSVGR--SP-KGIAVTPDGTKV 172 (391)
T ss_dssp EEECSSSEEEEEECTT---------SSEEEEEETTT------TEEEEEETTTTEEEEEEECCS--SE-EEEEECTTSSEE
T ss_pred EEeCCCCcceEEECCC---------CCEEEEEeCCC------CEEEEEECCCCcEEEEEecCC--Cc-ceEEECCCCCEE
Confidence 2222222222332211 11566776532 479999999887655432221 11 22222 2 3467
Q ss_pred EEEecC-CeEEEEECCCCcEEe
Q 035526 427 YVYSET-EKLAGYYIERGFWIG 447 (557)
Q Consensus 427 Yv~GG~-~~i~~YD~~~~~W~~ 447 (557)
|+.++. ..+..||+.++.-..
T Consensus 173 ~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 173 YVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCEEEEEECCCCeEEE
Confidence 777654 589999998876543
No 30
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.23 E-value=0.89 Score=44.32 Aligned_cols=192 Identities=5% Similarity=-0.108 Sum_probs=94.3
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEE-ECC-EEEEEcccCCCCCCccccCCcccccceE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMD-DVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~-~~~-~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
.+.+|+.... ...+..||+.+++.......+.. .. .++. -++ .||+.+... ..+
T Consensus 9 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~--~~-~~~~s~dg~~l~~~~~~~----------------~~i 64 (331)
T 3u4y_A 9 SNFGIVVEQH-----LRRISFFSTDTLEILNQITLGYD--FV-DTAITSDCSNVVVTSDFC----------------QTL 64 (331)
T ss_dssp CCEEEEEEGG-----GTEEEEEETTTCCEEEEEECCCC--EE-EEEECSSSCEEEEEESTT----------------CEE
T ss_pred CCEEEEEecC-----CCeEEEEeCcccceeeeEEccCC--cc-eEEEcCCCCEEEEEeCCC----------------CeE
Confidence 5677777653 35789999999887654443322 22 3433 244 577776522 379
Q ss_pred EEEecCCCcE--EEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCc
Q 035526 268 LVFSPLTKSW--WKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDG 345 (557)
Q Consensus 268 ~~ydp~t~~W--~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~ 345 (557)
++||+.+++- ..+.....+... ..+.-+| ..+| .+.. ......+..||....+
T Consensus 65 ~~~d~~~~~~~~~~~~~~~~~~~~---~~~s~dg---------------~~l~-~~~~------~~~~~~i~v~d~~~~~ 119 (331)
T 3u4y_A 65 VQIETQLEPPKVVAIQEGQSSMAD---VDITPDD---------------QFAV-TVTG------LNHPFNMQSYSFLKNK 119 (331)
T ss_dssp EEEECSSSSCEEEEEEECSSCCCC---EEECTTS---------------SEEE-ECCC------SSSSCEEEEEETTTTE
T ss_pred EEEECCCCceeEEecccCCCCccc---eEECCCC---------------CEEE-EecC------CCCcccEEEEECCCCC
Confidence 9999998874 223222222221 2222222 1344 3221 1111256677776665
Q ss_pred ccccCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCce-EEEEeCCCCc-EEEc--cCCCCCCcCceEEEE
Q 035526 346 FEGSLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDS-GEIYDSVSNK-WMEI--QRLPVDFGVVSSGVV 421 (557)
Q Consensus 346 W~~~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~-ve~YD~~t~~-W~~v--~~lp~~~~~~~~~vv 421 (557)
-....+.....+.++.-.+ ...+|+.+..+ .. +.+|+...+. -... ..++........+..
T Consensus 120 ~~~~~~~~~~~~~~~~spd---------g~~l~~~~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s 184 (331)
T 3u4y_A 120 FISTIPIPYDAVGIAISPN---------GNGLILIDRSS------ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFT 184 (331)
T ss_dssp EEEEEECCTTEEEEEECTT---------SSCEEEEEETT------TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEEC
T ss_pred eEEEEECCCCccceEECCC---------CCEEEEEecCC------CceEEEEEECCCCcEeecCCccccCCCCccceEEC
Confidence 4432222222233333221 11477766532 23 6667655432 1111 111111111122223
Q ss_pred ECC-EEEEEec-CCeEEEEECCCCcE
Q 035526 422 CNG-IFYVYSE-TEKLAGYYIERGFW 445 (557)
Q Consensus 422 ~~g-~lYv~GG-~~~i~~YD~~~~~W 445 (557)
-+| .+|+.+. .+.+..||+++.+.
T Consensus 185 pdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 185 PDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp TTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred CCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 355 4888874 46899999987764
No 31
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.15 E-value=0.41 Score=47.33 Aligned_cols=202 Identities=9% Similarity=-0.012 Sum_probs=95.9
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-C--CEEEEEcccCCCCCCccccCCcccccce
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-M--DDVYVVGGCSSLTSFGRVDGSSFKTHKR 266 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~--~~IYViGG~~~~~~~~~~~~~~~~~~~~ 266 (557)
++.+++.|+.+ ..+..||.....+..+..+......-.+++.. + +.+++.|+.++ .
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg----------------~ 80 (379)
T 3jrp_A 22 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG----------------K 80 (379)
T ss_dssp SSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS----------------C
T ss_pred CCCEEEEEECC-----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC----------------E
Confidence 33455555532 34778887766665554443221222334432 2 56777777543 5
Q ss_pred EEEEecCCCcEEEcccCCcCcccceEEEEecC--CCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCC
Q 035526 267 VLVFSPLTKSWWKVASMRYARSMPILGISEVS--PEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFD 344 (557)
Q Consensus 267 v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~--g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~ 344 (557)
+.+||..+++|..+..+...........+..+ + ..++.|+.+ ..+..||....
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----------------~~l~~~~~d---------~~i~v~d~~~~ 135 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG----------------PLLLVASSD---------GKVSVVEFKEN 135 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC----------------SEEEEEETT---------SEEEEEECCTT
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCC----------------CEEEEecCC---------CcEEEEecCCC
Confidence 88999999988766544432222112222211 2 456666543 23444555443
Q ss_pred cccc--cCCCCCCCceEEEeccchh----hhhhccceEEEEEcccCCCCCCCceEEEEeCCCC--cEEEccCCCCCCcCc
Q 035526 345 GFEG--SLLPNRKSYKFIRQKSDQS----IAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDFGVV 416 (557)
Q Consensus 345 ~W~~--~~~~~r~~~~~~~~~~d~~----~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~--~W~~v~~lp~~~~~~ 416 (557)
.-.. ...........+....... ......++.+++.|+.++ .+.+||..++ .|..+..+.......
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~h~~~v 209 (379)
T 3jrp_A 136 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWV 209 (379)
T ss_dssp SCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred CceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC------eEEEEEecCCCcceeeEEEEecccCcE
Confidence 2211 0000111111111110000 000000236777777543 5788887654 466554443322222
Q ss_pred eEEEE-EC---CEEEEEecCC-eEEEEECCCC
Q 035526 417 SSGVV-CN---GIFYVYSETE-KLAGYYIERG 443 (557)
Q Consensus 417 ~~~vv-~~---g~lYv~GG~~-~i~~YD~~~~ 443 (557)
.+.+. -+ +.+.+.|+.+ .+..||+.+.
T Consensus 210 ~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 210 RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred eEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 23233 23 6777777654 7899998775
No 32
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.07 E-value=0.76 Score=44.68 Aligned_cols=65 Identities=9% Similarity=-0.035 Sum_probs=35.4
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCC-CcEEEcc--C--CCCCCcCceEEEEECC-EEEEEe-cCCeEEEEECC--CCcEE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVS-NKWMEIQ--R--LPVDFGVVSSGVVCNG-IFYVYS-ETEKLAGYYIE--RGFWI 446 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t-~~W~~v~--~--lp~~~~~~~~~vv~~g-~lYv~G-G~~~i~~YD~~--~~~W~ 446 (557)
.||+.+..+ ..+.+||..+ ++...+. . .+........+..-++ .||+.+ +.+.+..||+. ++.+.
T Consensus 142 ~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 142 TLWVPALKQ------DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp EEEEEEGGG------TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCE
T ss_pred EEEEecCCC------CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence 566665322 4689999887 6666433 1 2222111111122244 588877 44689999984 34443
No 33
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.94 E-value=0.37 Score=47.08 Aligned_cols=153 Identities=9% Similarity=-0.015 Sum_probs=94.2
Q ss_pred eeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCC
Q 035526 230 FMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQS 309 (557)
Q Consensus 230 ~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~ 309 (557)
+..++...++.||+..|..+ .+.++|+.|++=..-- ++ ...++.++...++
T Consensus 56 ftqGL~~~~~~Ly~stG~~g----------------~v~~iD~~Tgkv~~~~-l~--~~~FgeGit~~g~---------- 106 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQG----------------TLRQLSLESAQPVWME-RL--GNIFAEGLASDGE---------- 106 (268)
T ss_dssp CEEEEEEETTEEEEEETTTT----------------EEEECCSSCSSCSEEE-EC--TTCCEEEEEECSS----------
T ss_pred ccceEEEECCEEEEEcCCCC----------------EEEEEECCCCcEEeEE-CC--CCcceeEEEEeCC----------
Confidence 44577778999999998543 4899999988653322 22 2334444444333
Q ss_pred CCCCCCcEEEEcccccccCCCCcccceeeccccCCcccccCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCC
Q 035526 310 HQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEP 389 (557)
Q Consensus 310 ~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~ 389 (557)
++|++... -+.+..||+.+-+-....+.+..+.+++.-+. ++|+..|.
T Consensus 107 ------~Ly~ltw~---------~~~v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~-----------~L~vSdGs------ 154 (268)
T 3nok_A 107 ------RLYQLTWT---------EGLLFTWSGMPPQRERTTRYSGEGWGLCYWNG-----------KLVRSDGG------ 154 (268)
T ss_dssp ------CEEEEESS---------SCEEEEEETTTTEEEEEEECSSCCCCEEEETT-----------EEEEECSS------
T ss_pred ------EEEEEEcc---------CCEEEEEECCcCcEEEEEeCCCceeEEecCCC-----------EEEEECCC------
Confidence 78887543 24566788776654443333344556664443 88888752
Q ss_pred CceEEEEeCCCCcEEEc---cCCCCCCcCceEEEEECCEEEEEe-cCCeEEEEECCCCc
Q 035526 390 LDSGEIYDSVSNKWMEI---QRLPVDFGVVSSGVVCNGIFYVYS-ETEKLAGYYIERGF 444 (557)
Q Consensus 390 l~~ve~YD~~t~~W~~v---~~lp~~~~~~~~~vv~~g~lYv~G-G~~~i~~YD~~~~~ 444 (557)
+.+..+||++.+=..- ..-+.+.....-....+|+||+-- ..+.|.+.|+++++
T Consensus 155 -~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 155 -TMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp -SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCB
T ss_pred -CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCc
Confidence 4799999999754322 112222221112234599999766 35799999999876
No 34
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.64 E-value=0.65 Score=45.89 Aligned_cols=63 Identities=11% Similarity=0.016 Sum_probs=37.2
Q ss_pred ceEEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEccc
Q 035526 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVAS 282 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~ 282 (557)
-.++.+|+.++++..+...........-+..-+++||+.+.... ...+++||+.+++++.+..
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~--------------~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDD--------------EGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETT--------------EEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCC--------------CceEEEEEecCCcEEEeee
Confidence 34677788888876654322111111222233677888764211 2479999998888876654
No 35
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.47 E-value=1.7 Score=41.21 Aligned_cols=187 Identities=7% Similarity=-0.063 Sum_probs=92.8
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
++.||+.... ...+..||+ +++...... +.......+++.. ++.||+.... ...++
T Consensus 109 ~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~----------------~~~i~ 165 (299)
T 2z2n_A 109 NGDIWFTEMN-----GNRIGRITD-DGKIREYEL-PNKGSYPSFITLGSDNALWFTENQ----------------NNAIG 165 (299)
T ss_dssp TSCEEEEETT-----TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSCEEEEETT----------------TTEEE
T ss_pred CCCEEEEecC-----CceEEEECC-CCCEEEecC-CCCCCCCceEEEcCCCCEEEEeCC----------------CCEEE
Confidence 4556665422 246888998 666554322 1111223444444 5688886531 23799
Q ss_pred EEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc
Q 035526 269 VFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (557)
Q Consensus 269 ~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~ 348 (557)
+||+ +++....+ .+..-..+....+..+| .+|+.... .+.+.+||+ ......
T Consensus 166 ~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g----------------~l~v~~~~---------~~~i~~~~~-~g~~~~ 217 (299)
T 2z2n_A 166 RITE-SGDITEFK-IPTPASGPVGITKGNDD----------------ALWFVEII---------GNKIGRITT-SGEITE 217 (299)
T ss_dssp EECT-TCCEEEEE-CSSTTCCEEEEEECTTS----------------SEEEEETT---------TTEEEEECT-TCCEEE
T ss_pred EEcC-CCcEEEee-CCCCCCcceeEEECCCC----------------CEEEEccC---------CceEEEECC-CCcEEE
Confidence 9999 77776542 11111112122222223 67766421 123455666 444333
Q ss_pred -cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEE
Q 035526 349 -SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFY 427 (557)
Q Consensus 349 -~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lY 427 (557)
..+............. .++||+.... ...+.+||+ +++...+. ++.........++.++.||
T Consensus 218 ~~~~~~~~~~~~i~~~~---------~g~l~v~~~~------~~~i~~~d~-~g~~~~~~-~~~~~~~~~~i~~~~g~l~ 280 (299)
T 2z2n_A 218 FKIPTPNARPHAITAGA---------GIDLWFTEWG------ANKIGRLTS-NNIIEEYP-IQIKSAEPHGICFDGETIW 280 (299)
T ss_dssp EECSSTTCCEEEEEECS---------TTCEEEEETT------TTEEEEEET-TTEEEEEE-CSSSSCCEEEEEECSSCEE
T ss_pred EECCCCCCCceeEEECC---------CCCEEEeccC------CceEEEECC-CCceEEEe-CCCCCCccceEEecCCCEE
Confidence 1221111111222221 1478776521 246889998 45544442 2221122222233688999
Q ss_pred EEecCCeEEEEECCCCc
Q 035526 428 VYSETEKLAGYYIERGF 444 (557)
Q Consensus 428 v~GG~~~i~~YD~~~~~ 444 (557)
+....+.+.+||+++++
T Consensus 281 v~~~~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 281 FAMECDKIGKLTLIKDN 297 (299)
T ss_dssp EEETTTEEEEEEEC---
T ss_pred EEecCCcEEEEEcCccc
Confidence 98766799999998754
No 36
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.46 E-value=1.4 Score=44.80 Aligned_cols=198 Identities=12% Similarity=-0.028 Sum_probs=97.5
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCC---cCcceeeEEEE-ECCEEEEEcccCCCCCCccccCCcccccc
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASI---LKGRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDGSSFKTHK 265 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p---~~~R~~~s~a~-~~~~IYViGG~~~~~~~~~~~~~~~~~~~ 265 (557)
++.+++.++.+ ..+..+|+.+.+........ .+...-.+++. -++.+|+.++.+ .
T Consensus 133 ~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d----------------~ 191 (433)
T 3bws_A 133 NTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA----------------N 191 (433)
T ss_dssp SSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG----------------T
T ss_pred CCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC----------------C
Confidence 56677766432 35899999988766543321 11111122333 367888887743 3
Q ss_pred eEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCc
Q 035526 266 RVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDG 345 (557)
Q Consensus 266 ~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~ 345 (557)
.+.+||+.+.+....-.. .........+..++ ..+|+.++.+ ..+..||+....
T Consensus 192 ~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~---------------~~l~~~~~~~---------~~i~~~d~~~~~ 245 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDL--TGKWSKILLYDPIR---------------DLVYCSNWIS---------EDISVIDRKTKL 245 (433)
T ss_dssp EEEEEETTTCCEEEEEEC--SSSSEEEEEEETTT---------------TEEEEEETTT---------TEEEEEETTTTE
T ss_pred EEEEEECCCceEEEEEcC--CCCCeeEEEEcCCC---------------CEEEEEecCC---------CcEEEEECCCCc
Confidence 789999887654332111 11111122222222 1455555432 245667776554
Q ss_pred ccccCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCC-C-CCceEEEEeCCCCcEEEccCCCCCCcCceEEEEEC
Q 035526 346 FEGSLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWD-E-PLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCN 423 (557)
Q Consensus 346 W~~~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~-~-~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~ 423 (557)
.....+.......++...+ ++.+++++..... . .-..+.+||+.+.+-......+. .....+..-+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~----------g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~ 313 (433)
T 3bws_A 246 EIRKTDKIGLPRGLLLSKD----------GKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNT 313 (433)
T ss_dssp EEEECCCCSEEEEEEECTT----------SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSS
T ss_pred EEEEecCCCCceEEEEcCC----------CCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC--CcceEEECCC
Confidence 4332222211122222111 2444444432211 0 12478999998875443321111 1111112223
Q ss_pred C-EEEEEecC-CeEEEEECCCCcEE
Q 035526 424 G-IFYVYSET-EKLAGYYIERGFWI 446 (557)
Q Consensus 424 g-~lYv~GG~-~~i~~YD~~~~~W~ 446 (557)
+ .+|+.++. +.+..||+.+++-.
T Consensus 314 g~~l~~~~~~~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 314 ENKIYVSDMCCSKIEVYDLKEKKVQ 338 (433)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCEEEEEecCCCEEEEEECCCCcEE
Confidence 4 78888654 58999999876543
No 37
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.38 E-value=0.47 Score=48.39 Aligned_cols=180 Identities=9% Similarity=-0.105 Sum_probs=91.6
Q ss_pred eEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCCc
Q 035526 207 EIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMRY 285 (557)
Q Consensus 207 ~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~~ 285 (557)
.++.+|+.+..+..+..++.. ....+++.. ++.+|+.++.+ ..+.+||+.+++.....+...
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~----------------~~i~~~d~~~g~~~~~~~~~~ 164 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAIPLLED----------------EGMDVLDINSGQTVRLSPPEK 164 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEEEBTTS----------------SSEEEEETTTCCEEEECCCHH
T ss_pred EEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEEEeCCC----------------CeEEEEECCCCeEeeecCccc
Confidence 688889887766665544332 111233332 67888877633 258999999888765433221
Q ss_pred ---CcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccccCCCCCCCceEEEe
Q 035526 286 ---ARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPNRKSYKFIRQ 362 (557)
Q Consensus 286 ---~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~~~~~~r~~~~~~~~ 362 (557)
.........+..++ .+++.|+.+ ..+..||....+..............+..
T Consensus 165 ~~~~~~~v~~~~~~~~~----------------~~~~s~~~d---------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 219 (433)
T 3bws_A 165 YKKKLGFVETISIPEHN----------------ELWVSQMQA---------NAVHVFDLKTLAYKATVDLTGKWSKILLY 219 (433)
T ss_dssp HHTTCCEEEEEEEGGGT----------------EEEEEEGGG---------TEEEEEETTTCCEEEEEECSSSSEEEEEE
T ss_pred ccccCCceeEEEEcCCC----------------EEEEEECCC---------CEEEEEECCCceEEEEEcCCCCCeeEEEE
Confidence 11111112222223 566666532 34556776654433222111111112222
Q ss_pred ccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECC-EEEEEec--------C
Q 035526 363 KSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNG-IFYVYSE--------T 432 (557)
Q Consensus 363 ~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g-~lYv~GG--------~ 432 (557)
..+ ...+|+.++.+ ..+.+||+.+.+....-. ..... ...++ -++ .||+.+. .
T Consensus 220 ~~~--------~~~l~~~~~~~------~~i~~~d~~~~~~~~~~~--~~~~~-~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 220 DPI--------RDLVYCSNWIS------EDISVIDRKTKLEIRKTD--KIGLP-RGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp ETT--------TTEEEEEETTT------TEEEEEETTTTEEEEECC--CCSEE-EEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred cCC--------CCEEEEEecCC------CcEEEEECCCCcEEEEec--CCCCc-eEEEEcCCCCEEEEEECCCCccccCC
Confidence 211 12566766532 368999998886644322 22111 22222 245 5555542 3
Q ss_pred CeEEEEECCCCcE
Q 035526 433 EKLAGYYIERGFW 445 (557)
Q Consensus 433 ~~i~~YD~~~~~W 445 (557)
..|..||+.+++-
T Consensus 283 g~i~~~d~~~~~~ 295 (433)
T 3bws_A 283 GRLGIYSMDKEKL 295 (433)
T ss_dssp EEEEEEETTTTEE
T ss_pred CeEEEEECCCCcE
Confidence 4788999987653
No 38
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.37 E-value=0.83 Score=44.62 Aligned_cols=155 Identities=12% Similarity=-0.018 Sum_probs=89.5
Q ss_pred eeEEEEEC-CEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCC
Q 035526 231 MFSVVSIM-DDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQS 309 (557)
Q Consensus 231 ~~s~a~~~-~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~ 309 (557)
-++++..+ +.||+..|..+. +.+.++|+.|++=..--+++. ..+..++...++
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~--------------s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~g~---------- 76 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGR--------------SSVRQVALQTGKVENIHKMDD--SYFGEGLTLLNE---------- 76 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTT--------------CEEEEEETTTCCEEEEEECCT--TCCEEEEEEETT----------
T ss_pred cccEEEeCCCeEEEECCCCCC--------------CEEEEEECCCCCEEEEEecCC--CcceEEEEEeCC----------
Confidence 36677666 899998874332 489999999998654333322 223333333223
Q ss_pred CCCCCCcEEEEcccccccCCCCcccceeeccccCCcccccCCCC-CCCceEEEeccchhhhhhccceEEEEEcccCCCCC
Q 035526 310 HQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPN-RKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDE 388 (557)
Q Consensus 310 ~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~~~~~~-r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~ 388 (557)
.+|+..-. -+.+..||+.+.+=....+.+ ..+.+++.-+ .++|+..|
T Consensus 77 ------~lyv~t~~---------~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg-----------~~l~vs~g------ 124 (266)
T 2iwa_A 77 ------KLYQVVWL---------KNIGFIYDRRTLSNIKNFTHQMKDGWGLATDG-----------KILYGSDG------ 124 (266)
T ss_dssp ------EEEEEETT---------CSEEEEEETTTTEEEEEEECCSSSCCEEEECS-----------SSEEEECS------
T ss_pred ------EEEEEEec---------CCEEEEEECCCCcEEEEEECCCCCeEEEEECC-----------CEEEEECC------
Confidence 67777532 245667887755433322222 3344444322 27888754
Q ss_pred CCceEEEEeCCCCcEEE-cc--CCCCCCcCceEEEEECCEEEEEec-CCeEEEEECCCCc
Q 035526 389 PLDSGEIYDSVSNKWME-IQ--RLPVDFGVVSSGVVCNGIFYVYSE-TEKLAGYYIERGF 444 (557)
Q Consensus 389 ~l~~ve~YD~~t~~W~~-v~--~lp~~~~~~~~~vv~~g~lYv~GG-~~~i~~YD~~~~~ 444 (557)
.+.+.++|+++.+=.. +. ..+.+..........++++|+-.. .+.|.+.|+++++
T Consensus 125 -s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~ 183 (266)
T 2iwa_A 125 -TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGT 183 (266)
T ss_dssp -SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCC
T ss_pred -CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCc
Confidence 2579999999875332 21 111221111122344999998764 5799999998875
No 39
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.36 E-value=1.5 Score=43.51 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=20.8
Q ss_pred ECC-EEEEEe-cCCeEEEEECCCCcEEeccC
Q 035526 422 CNG-IFYVYS-ETEKLAGYYIERGFWIGIQT 450 (557)
Q Consensus 422 ~~g-~lYv~G-G~~~i~~YD~~~~~W~~i~~ 450 (557)
-+| .+|+.+ +.+.+..||+.++.+..+..
T Consensus 220 pdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 220 SDGKFAYLINEIGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp TTSSEEEEEETTTCEEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEEcCCCCeEEEEEecCCceEEeEE
Confidence 355 588887 45689999998887765543
No 40
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.24 E-value=2.5 Score=41.26 Aligned_cols=207 Identities=10% Similarity=-0.035 Sum_probs=101.0
Q ss_pred CCeEEEEeeecCC-cccceEEEeeCCCCceEEccCCCcCcceeeEEEE-EC-CEEEEEcccCCCCCCccccCCcccccce
Q 035526 190 NPWLFLFGAVKDG-YYSGEIHALDVSQDQWHRIDASILKGRFMFSVVS-IM-DDVYVVGGCSSLTSFGRVDGSSFKTHKR 266 (557)
Q Consensus 190 ~~~L~v~GG~~~~-~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~-~~-~~IYViGG~~~~~~~~~~~~~~~~~~~~ 266 (557)
+..+|+....... .....++.+|+.+.+....-+... . .++++. -+ +.+|+.++.. ..
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~-~~~~~~s~dg~~l~v~~~~~----------------~~ 112 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL--K-PFGATINNTTQTLWFGNTVN----------------SA 112 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS--C-CCSEEEETTTTEEEEEETTT----------------TE
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC--C-cceEEECCCCCEEEEEecCC----------------CE
Confidence 5677776532111 124579999998876543222211 1 122333 33 4588876532 37
Q ss_pred EEEEecCCCcEEEcccCCcCcc-------cceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeec
Q 035526 267 VLVFSPLTKSWWKVASMRYARS-------MPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQY 339 (557)
Q Consensus 267 v~~ydp~t~~W~~l~~m~~~R~-------~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~y 339 (557)
+++||+.+++-...-+...... .+....+..+| ..+|+.+... ...+..|
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg---------------~~l~~~~~~~--------~~~i~~~ 169 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDAT---------------NTVYISGIGK--------ESVIWVV 169 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTT---------------TEEEEEEESS--------SCEEEEE
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCC---------------CEEEEEecCC--------CceEEEE
Confidence 9999999887533222221110 11122233233 1456554211 1345567
Q ss_pred cccCCcccccCC-CCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCC--CCcCc
Q 035526 340 RNSFDGFEGSLL-PNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPV--DFGVV 416 (557)
Q Consensus 340 d~~~~~W~~~~~-~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~--~~~~~ 416 (557)
|+.+.+-....+ .......++...+ ...+|+... -..+.+||+.+.+=...-..+. +....
T Consensus 170 d~~~~~~~~~~~~~~~~~~~~~~s~d---------g~~l~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 233 (353)
T 3vgz_A 170 DGGNIKLKTAIQNTGKMSTGLALDSE---------GKRLYTTNA-------DGELITIDTADNKILSRKKLLDDGKEHFF 233 (353)
T ss_dssp ETTTTEEEEEECCCCTTCCCCEEETT---------TTEEEEECT-------TSEEEEEETTTTEEEEEEECCCSSSCCCE
T ss_pred cCCCCceEEEecCCCCccceEEECCC---------CCEEEEEcC-------CCeEEEEECCCCeEEEEEEcCCCCCCccc
Confidence 766554333222 2222233333221 125666543 2468899998875433222211 11111
Q ss_pred eEEEEE--CCEEEEEecC-CeEEEEECCCCcEEeccCCCCC
Q 035526 417 SSGVVC--NGIFYVYSET-EKLAGYYIERGFWIGIQTSPFP 454 (557)
Q Consensus 417 ~~~vv~--~g~lYv~GG~-~~i~~YD~~~~~W~~i~~~p~p 454 (557)
...++. ++.+|+.+.. +.+..||+.+++....-..+.+
T Consensus 234 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 274 (353)
T 3vgz_A 234 INISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES 274 (353)
T ss_dssp EEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 122332 4568887754 6999999988775543333333
No 41
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.77 E-value=2.8 Score=40.66 Aligned_cols=68 Identities=12% Similarity=-0.048 Sum_probs=40.4
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CC-EEEEEcccCCCCCCccccCCcccccceE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MD-DVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~-~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
++.+|+.++. ...+..+|+.+++....-..+.. .....++.. ++ .+|+.+..+ ..+
T Consensus 10 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~~~v~~~~~----------------~~i 67 (349)
T 1jmx_B 10 GHEYMIVTNY-----PNNLHVVDVASDTVYKSCVMPDK-FGPGTAMMAPDNRTAYVLNNHY----------------GDI 67 (349)
T ss_dssp TCEEEEEEET-----TTEEEEEETTTTEEEEEEECSSC-CSSCEEEECTTSSEEEEEETTT----------------TEE
T ss_pred CCEEEEEeCC-----CCeEEEEECCCCcEEEEEecCCC-CCCceeEECCCCCEEEEEeCCC----------------CcE
Confidence 5667777754 35689999998875433222220 011233333 44 578776422 379
Q ss_pred EEEecCCCcEEE
Q 035526 268 LVFSPLTKSWWK 279 (557)
Q Consensus 268 ~~ydp~t~~W~~ 279 (557)
++||+.+++-..
T Consensus 68 ~~~d~~t~~~~~ 79 (349)
T 1jmx_B 68 YGIDLDTCKNTF 79 (349)
T ss_dssp EEEETTTTEEEE
T ss_pred EEEeCCCCcEEE
Confidence 999998887553
No 42
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.74 E-value=2.3 Score=43.70 Aligned_cols=187 Identities=6% Similarity=-0.112 Sum_probs=94.1
Q ss_pred ceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCE-EEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccC
Q 035526 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDD-VYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASM 283 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~-IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m 283 (557)
..++.+|..+++...+...+. ...+++.. +++ |++.+..++ ...+++||+.+++...+...
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~---~~~~~~~spdg~~la~~~~~~g--------------~~~i~~~d~~~~~~~~l~~~ 265 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR---HNGAPAFSPDGSKLAFALSKTG--------------SLNLYVMDLASGQIRQVTDG 265 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS---CEEEEEECTTSSEEEEEECTTS--------------SCEEEEEETTTCCEEECCCC
T ss_pred cEEEEEECCCCcEEEeecCCC---cccCEEEcCCCCEEEEEEecCC--------------CceEEEEECCCCCEEeCcCC
Confidence 578999999988776654332 12233332 444 554554332 23799999999887766543
Q ss_pred CcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccccCCCCCCCceEEEec
Q 035526 284 RYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPNRKSYKFIRQK 363 (557)
Q Consensus 284 ~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~~~~~~r~~~~~~~~~ 363 (557)
... .....+.-+| +.+++++.. .....+..+|.....-............ +...
T Consensus 266 ~~~---~~~~~~spdg----------------~~l~~~s~~------~g~~~i~~~d~~~~~~~~l~~~~~~~~~-~~~s 319 (415)
T 2hqs_A 266 RSN---NTEPTWFPDS----------------QNLAFTSDQ------AGRPQVYKVNINGGAPQRITWEGSQNQD-ADVS 319 (415)
T ss_dssp SSC---EEEEEECTTS----------------SEEEEEECT------TSSCEEEEEETTSSCCEECCCSSSEEEE-EEEC
T ss_pred CCc---ccceEECCCC----------------CEEEEEECC------CCCcEEEEEECCCCCEEEEecCCCcccC-eEEC
Confidence 211 1112222233 333333311 1122344556554432211111111111 1221
Q ss_pred cchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC-C---eEEEEE
Q 035526 364 SDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET-E---KLAGYY 439 (557)
Q Consensus 364 ~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~-~---~i~~YD 439 (557)
. .++.+++++.+.. ...+.++|+.+++...+..-. .....+..-+|+..++++. . .++.+|
T Consensus 320 p---------dG~~l~~~~~~~g---~~~i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 320 S---------DGKFMVMVSSNGG---QQHIAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGMGSVLNLVS 384 (415)
T ss_dssp T---------TSSEEEEEEECSS---CEEEEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred C---------CCCEEEEEECcCC---ceEEEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCCccEEEEEE
Confidence 1 1354555543221 357999999999887765322 2112223335655444433 2 799999
Q ss_pred CCCCcEEeccC
Q 035526 440 IERGFWIGIQT 450 (557)
Q Consensus 440 ~~~~~W~~i~~ 450 (557)
+..+....+..
T Consensus 385 ~~g~~~~~l~~ 395 (415)
T 2hqs_A 385 TDGRFKARLPA 395 (415)
T ss_dssp TTSCCEEECCC
T ss_pred CCCCcEEEeeC
Confidence 98877766654
No 43
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=94.32 E-value=2e-05 Score=77.37 Aligned_cols=136 Identities=12% Similarity=0.072 Sum_probs=80.0
Q ss_pred hhHHHHHHHH---HHHhccCCCCCCCCCcccccccceeeeee--ecCCCceeeeccCCCcCCCCCcccCCCccccCCCCC
Q 035526 22 VSKRLVRSVS---RKLRNKNLRNYDGDDEDDVKGVSLKCLTL--YGRGGGCKVGAETGEECGDSSSRRRSSASEEGKGYK 96 (557)
Q Consensus 22 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (557)
++..+|..|. .+|+....+..|.+++. .+...-||+.+ +|...+|.-+...-.+|+..++.. ...+++ |+
T Consensus 99 i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~-~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~-v~~~~~---f~ 173 (256)
T 3hve_A 99 LNEDTIQDVVQAADLLLLTDLKTLCCEFLE-GCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRD-VSSTEE---FL 173 (256)
T ss_dssp CC-CCHHHHHHHHHHHTCHHHHHHHHHHHH-HTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTTCHH---HH
T ss_pred ccHhHHHHHHHHHHHHChHHHHHHHHHHHH-hhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH-HhCCcc---hh
Confidence 4455555554 77777777777777776 45666799998 777788875555555555444433 222222 33
Q ss_pred CCCCCcc---------cce-eeeeeeccceeceeeecCCc--cccccccccccCCCCCCCHHHHHHHHhcCCccchhhhh
Q 035526 97 PFCGSEE---------IGV-GVDCFSYGVKEKFWKKSNSK--NLELQDSVRNSRMHIFLPDDTLEMCLVRFPLTSLMNAR 164 (557)
Q Consensus 97 ~~c~~e~---------~~~-~~~~~~~~~~~~~W~~~~~~--~~~l~~l~~~~r~~~~lp~dl~~~il~rLP~~sl~~~~ 164 (557)
.+..++. .+. ..+.|.. .+.|++|+.+ ..+++++++++|++.+.|+++.+.+.. ..+++..
T Consensus 174 ~L~~~~l~~lL~~d~L~v~~E~~v~~a---v~~W~~~~~~~R~~~~~~ll~~VRf~~l~~~~l~~~v~~----~~l~~~~ 246 (256)
T 3hve_A 174 ELSPQKLKEVISLEKLNVGNERYVFEA---VIRWIAHDTEIRKVHMKDVMSALWVSGLDSSYLREQMLN----EPLVREI 246 (256)
T ss_dssp SSCHHHHHHHHHCC-------CTTHHH---HTTTCCC--CCSTTTHHHHHHHHHHHTTCC-CHHHHHHT----STTHHHH
T ss_pred cCCHHHHHHHHccCCCCCCCHHHHHHH---HHHHHHcCHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhc----ChHHHhh
Confidence 2211110 000 1222332 2459999987 588999999999999999999988766 5566665
Q ss_pred -hcccc
Q 035526 165 -LVCKK 169 (557)
Q Consensus 165 -~vck~ 169 (557)
..|+.
T Consensus 247 ~~~c~~ 252 (256)
T 3hve_A 247 VKECSN 252 (256)
T ss_dssp HCC---
T ss_pred HHHHHH
Confidence 45654
No 44
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.27 E-value=4.2 Score=39.43 Aligned_cols=69 Identities=9% Similarity=-0.005 Sum_probs=50.3
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLV 269 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ 269 (557)
++.||+-.|..+ .+.+..+|+.+++-..--+++.. -++.+++..+++||+.... .+.+++
T Consensus 52 ~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l~~~-~FgeGit~~g~~ly~ltw~----------------~~~v~v 111 (262)
T 3nol_A 52 NGYFYESTGLNG---RSSIRKVDIESGKTLQQIELGKR-YFGEGISDWKDKIVGLTWK----------------NGLGFV 111 (262)
T ss_dssp TTEEEEEEEETT---EEEEEEECTTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESS----------------SSEEEE
T ss_pred CCEEEEECCCCC---CceEEEEECCCCcEEEEEecCCc-cceeEEEEeCCEEEEEEee----------------CCEEEE
Confidence 678998888543 35789999999986544344432 4566788899999999653 347999
Q ss_pred EecCCCcEE
Q 035526 270 FSPLTKSWW 278 (557)
Q Consensus 270 ydp~t~~W~ 278 (557)
||+.|.+-.
T Consensus 112 ~D~~t~~~~ 120 (262)
T 3nol_A 112 WNIRNLRQV 120 (262)
T ss_dssp EETTTCCEE
T ss_pred EECccCcEE
Confidence 999887654
No 45
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.27 E-value=4.7 Score=39.95 Aligned_cols=278 Identities=12% Similarity=0.089 Sum_probs=130.1
Q ss_pred hhhhhhcccccccccCChhhhhhhhccccCCCeEEEEeeecCCcccceEEEeeCCCCceEEccCCC-cCcceeeEEEEEC
Q 035526 160 LMNARLVCKKWRYLTTTPRFLQMRREGLHQNPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASI-LKGRFMFSVVSIM 238 (557)
Q Consensus 160 l~~~~~vck~W~~l~~sp~~~~~~~~~~~~~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p-~~~R~~~s~a~~~ 238 (557)
+.+..-.-+.|+.+.. |.-.....-.....+.+|++|.. ..++.-.-.-.+|..+.... .+.....+++..+
T Consensus 17 ~~~s~d~g~~W~~~~~-~~~~~~~~v~~~~~~~~~~~G~~------g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~ 89 (327)
T 2xbg_A 17 SAIPALDYNPWEAIQL-PTTATILDMSFIDRHHGWLVGVN------ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQG 89 (327)
T ss_dssp -CCCBCSSCCEEEEEC-SCSSCEEEEEESSSSCEEEEETT------TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEET
T ss_pred eeecCCCCCCceEeec-CCCCcEEEEEECCCCcEEEEcCC------CeEEEeCCCCCCCeECCCCCCCCCccEEEEEecC
Confidence 3344445568987652 21111111111234556666531 23444444456899886421 2223445566667
Q ss_pred CEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCC-cCcccceEEEEecCCCcccccccCCCCCCCCcE
Q 035526 239 DDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMR-YARSMPILGISEVSPEFSIIPCHQSHQDRRFPR 317 (557)
Q Consensus 239 ~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~-~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~l 317 (557)
+.+|++|.. ..+++-.=.-++|+.+.... .+-....+... .++ .+
T Consensus 90 ~~~~~~g~~-----------------g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~-~~~----------------~~ 135 (327)
T 2xbg_A 90 NEGWIVGEP-----------------PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKAL-GNG----------------SA 135 (327)
T ss_dssp TEEEEEEET-----------------TEEEEESSTTSSCEECCCCTTCSSCEEEEEEE-ETT----------------EE
T ss_pred CeEEEEECC-----------------CeEEEECCCCCCceECccccCCCCCeEEEEEE-CCC----------------CE
Confidence 889987531 13444333356899876431 11111112211 122 56
Q ss_pred EEEcccccccCCCCcccceeeccccCCcccc-cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEE
Q 035526 318 SRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIY 396 (557)
Q Consensus 318 yv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~-~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~Y 396 (557)
|+.|.... +.+-......|+. ..+.+..-+.++...+ +.+|++|..+ .++.-
T Consensus 136 ~~~~~~g~----------v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~----------~~~~~~g~~G-------~~~~S 188 (327)
T 2xbg_A 136 EMITNVGA----------IYRTKDSGKNWQALVQEAIGVMRNLNRSPS----------GEYVAVSSRG-------SFYST 188 (327)
T ss_dssp EEEETTCC----------EEEESSTTSSEEEEECSCCCCEEEEEECTT----------SCEEEEETTS-------SEEEE
T ss_pred EEEeCCcc----------EEEEcCCCCCCEEeecCCCcceEEEEEcCC----------CcEEEEECCC-------cEEEE
Confidence 66664221 1122223456877 3333333333333322 3677666321 23333
Q ss_pred -eCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECC-CCcEEeccCCCCCC--cccc--c--CCEEEEEc
Q 035526 397 -DSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIE-RGFWIGIQTSPFPP--CVIE--Y--YPKLVSWA 468 (557)
Q Consensus 397 -D~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~-~~~W~~i~~~p~p~--~~~~--~--~~~lv~~~ 468 (557)
|..-..|+.+.. +........+..-++.+|+.+....+...+.. -.+|+.+...+.+. .+.. + .+.+++.+
T Consensus 189 ~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g 267 (327)
T 2xbg_A 189 WEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG 267 (327)
T ss_dssp ECTTCSSCEEEEC-CSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE
T ss_pred eCCCCCceeECCC-CCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe
Confidence 333578998853 33333222223347789988866566666433 56899876421221 1111 1 34455543
Q ss_pred C-CCc-c--C-cCcEEEcccCCCCCCCCCceEEeeCCEEEEEc
Q 035526 469 R-SHV-P--Q-LECWTKVSVHPDAPMDWSAAFVADRNHIFGVE 506 (557)
Q Consensus 469 g-G~~-~--~-~~~W~~v~~~p~~~~~~~~~~~~~~~~iyvvg 506 (557)
+ |.+ . + ..+|+.+......+..........++.+|++|
T Consensus 268 ~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G 310 (327)
T 2xbg_A 268 GAGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILG 310 (327)
T ss_dssp STTCEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEEC
T ss_pred CCCeEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEc
Confidence 3 322 1 2 67999986421111122222223567777555
No 46
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.11 E-value=4.4 Score=39.02 Aligned_cols=61 Identities=10% Similarity=0.044 Sum_probs=34.1
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCC--cEEEccCCCCCCcCceEEEEE-C---CEEEEEecCC-eEEEEECCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDFGVVSSGVVC-N---GIFYVYSETE-KLAGYYIER 442 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~--~W~~v~~lp~~~~~~~~~vv~-~---g~lYv~GG~~-~i~~YD~~~ 442 (557)
++++.|+.++ .+.+||..+. .|..+..+........+.+.. + +.+.+.|+.+ .+..+|+++
T Consensus 171 ~~l~sgs~D~------~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 171 RKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp CEEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred ceEEEEcCCC------cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 5778887654 4677776553 365554443222222222332 2 3666677654 788888765
No 47
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.06 E-value=4.3 Score=39.74 Aligned_cols=72 Identities=6% Similarity=-0.127 Sum_probs=45.6
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCC--CcEEeccCCCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIER--GFWIGIQTSPF 453 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~--~~W~~i~~~p~ 453 (557)
..++.|+.+ ..+.+||..+.+-...-..+.. ........-++.+++.|....+..||+.+ +.|..+..+..
T Consensus 215 ~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~ 287 (372)
T 1k8k_C 215 SRVAWVSHD------STVCLADADKKMAVATLASETL-PLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDV 287 (372)
T ss_dssp SEEEEEETT------TEEEEEEGGGTTEEEEEECSSC-CEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCC
T ss_pred CEEEEEeCC------CEEEEEECCCCceeEEEccCCC-CeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCc
Confidence 566777643 3688999887653322111111 11122234578877777666899999988 99999887665
Q ss_pred C
Q 035526 454 P 454 (557)
Q Consensus 454 p 454 (557)
+
T Consensus 288 ~ 288 (372)
T 1k8k_C 288 P 288 (372)
T ss_dssp C
T ss_pred c
Confidence 4
No 48
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.03 E-value=1.5 Score=43.05 Aligned_cols=72 Identities=10% Similarity=0.003 Sum_probs=40.3
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCc----EEEccCCCCCCcCceEEEEECCEEEEEecC-CeEEEEECC-CCcEEecc
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNK----WMEIQRLPVDFGVVSSGVVCNGIFYVYSET-EKLAGYYIE-RGFWIGIQ 449 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~----W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~-~~i~~YD~~-~~~W~~i~ 449 (557)
.+++.|+.++ .+.+||..+.. -...................++.+.+.++. ..+..||+. ...|..+.
T Consensus 222 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~ 295 (379)
T 3jrp_A 222 SYLASVSQDR------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAG 295 (379)
T ss_dssp EEEEEEETTS------CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEE
T ss_pred CeEEEEeCCC------EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccccc
Confidence 7788887654 47888887753 222222112111112222246666665554 478899987 57788777
Q ss_pred CCCC
Q 035526 450 TSPF 453 (557)
Q Consensus 450 ~~p~ 453 (557)
.+..
T Consensus 296 ~~~~ 299 (379)
T 3jrp_A 296 EVHQ 299 (379)
T ss_dssp EEC-
T ss_pred ceec
Confidence 6543
No 49
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.02 E-value=1.4 Score=44.02 Aligned_cols=187 Identities=10% Similarity=-0.044 Sum_probs=95.5
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE--CCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~--~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
+..||+.++.+ ..+..+|..+++....-..+. .-.+++.. +..||+.+..+ ..+
T Consensus 43 g~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~~~---~v~~~~~spdg~~l~~~~~~~----------------~~v 98 (391)
T 1l0q_A 43 GTKVYVANAHS-----NDVSIIDTATNNVIATVPAGS---SPQGVAVSPDGKQVYVTNMAS----------------STL 98 (391)
T ss_dssp SSEEEEEEGGG-----TEEEEEETTTTEEEEEEECSS---SEEEEEECTTSSEEEEEETTT----------------TEE
T ss_pred CCEEEEECCCC-----CeEEEEECCCCeEEEEEECCC---CccceEECCCCCEEEEEECCC----------------CEE
Confidence 45677766432 468899998876544322221 22233333 34566665422 379
Q ss_pred EEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCccc
Q 035526 268 LVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFE 347 (557)
Q Consensus 268 ~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~ 347 (557)
.+||+.+++-...-.... ......+..++ ..+|+.++.+ ..+..||....+..
T Consensus 99 ~v~d~~~~~~~~~~~~~~---~~~~~~~s~dg---------------~~l~~~~~~~---------~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 99 SVIDTTSNTVAGTVKTGK---SPLGLALSPDG---------------KKLYVTNNGD---------KTVSVINTVTKAVI 151 (391)
T ss_dssp EEEETTTTEEEEEEECSS---SEEEEEECTTS---------------SEEEEEETTT---------TEEEEEETTTTEEE
T ss_pred EEEECCCCeEEEEEeCCC---CcceEEECCCC---------------CEEEEEeCCC---------CEEEEEECCCCcEE
Confidence 999999887654322211 11122222222 1455665432 24566777655543
Q ss_pred ccCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-EC-CE
Q 035526 348 GSLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CN-GI 425 (557)
Q Consensus 348 ~~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~-g~ 425 (557)
...........++...+ ...||+.++.+ ..+.+||+.+++-...-.... .. ...++ -+ ..
T Consensus 152 ~~~~~~~~~~~~~~~~d---------g~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~--~~-~~~~~~~~g~~ 213 (391)
T 1l0q_A 152 NTVSVGRSPKGIAVTPD---------GTKVYVANFDS------MSISVIDTVTNSVIDTVKVEA--AP-SGIAVNPEGTK 213 (391)
T ss_dssp EEEECCSSEEEEEECTT---------SSEEEEEETTT------TEEEEEETTTTEEEEEEECSS--EE-EEEEECTTSSE
T ss_pred EEEecCCCcceEEECCC---------CCEEEEEeCCC------CEEEEEECCCCeEEEEEecCC--Cc-cceEECCCCCE
Confidence 32221111122222211 12566666532 469999998886554432211 11 12222 23 45
Q ss_pred EEEEe---cCCeEEEEECCCCcE
Q 035526 426 FYVYS---ETEKLAGYYIERGFW 445 (557)
Q Consensus 426 lYv~G---G~~~i~~YD~~~~~W 445 (557)
||+.+ +...+..||+.+.+-
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTNKI 236 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTTEE
T ss_pred EEEEecCcCCCcEEEEECCCCeE
Confidence 67666 356899999987653
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=93.91 E-value=4.7 Score=38.64 Aligned_cols=61 Identities=11% Similarity=0.172 Sum_probs=35.3
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC-CeEEEEECCCCc
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
..++.|+.+ ..+.+||..+.+-...-..+. ........-++.++++|+. ..+..||+.+..
T Consensus 196 ~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 196 TKLWTGGLD------NTVRSWDLREGRQLQQHDFTS--QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD 257 (337)
T ss_dssp SEEEEEETT------SEEEEEETTTTEEEEEEECSS--CEEEEEECTTSSEEEEEETTSCEEEEETTSSC
T ss_pred CEEEEEecC------CcEEEEECCCCceEeeecCCC--ceEEEEECCCCCEEEEEcCCCcEEEEECCCCC
Confidence 667777643 468999998775433322222 1112222235666666654 589999998764
No 51
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.87 E-value=4.8 Score=38.66 Aligned_cols=64 Identities=16% Similarity=0.091 Sum_probs=35.3
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC-CeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
+++++.|+.++ .+.+||..+.+-...-...............++...+.|+. ..+..||..+..
T Consensus 161 ~~~l~~~~~d~------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 161 GSLIVSSSYDG------LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 225 (312)
T ss_dssp SSEEEEEETTS------CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE
T ss_pred CCEEEEEeCCC------cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 36777787543 58899998876433211111111111112235555555554 589999987754
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=93.67 E-value=3.8 Score=39.35 Aligned_cols=188 Identities=9% Similarity=-0.026 Sum_probs=88.9
Q ss_pred CeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEEE
Q 035526 191 PWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLV 269 (557)
Q Consensus 191 ~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ 269 (557)
+.+++.|+.+ ..+..||..+.+......+......-.+++.. ++..+++|+.++ .+.+
T Consensus 109 ~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----------------~v~~ 167 (337)
T 1gxr_A 109 GCTLIVGGEA-----STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG----------------NIAV 167 (337)
T ss_dssp SSEEEEEESS-----SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS----------------CEEE
T ss_pred CCEEEEEcCC-----CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC----------------cEEE
Confidence 3445555432 46889999887754433332221112233333 556667776443 5889
Q ss_pred EecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCccccc
Q 035526 270 FSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGS 349 (557)
Q Consensus 270 ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~~ 349 (557)
||..+.+....-. ..........+..++ ..++.|+.+ ..+..||.....-...
T Consensus 168 ~d~~~~~~~~~~~--~~~~~i~~~~~~~~~----------------~~l~~~~~d---------g~i~~~d~~~~~~~~~ 220 (337)
T 1gxr_A 168 WDLHNQTLVRQFQ--GHTDGASCIDISNDG----------------TKLWTGGLD---------NTVRSWDLREGRQLQQ 220 (337)
T ss_dssp EETTTTEEEEEEC--CCSSCEEEEEECTTS----------------SEEEEEETT---------SEEEEEETTTTEEEEE
T ss_pred EeCCCCceeeeee--cccCceEEEEECCCC----------------CEEEEEecC---------CcEEEEECCCCceEee
Confidence 9988775433211 111111111222122 455566532 2344566554432221
Q ss_pred CCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCEEEE
Q 035526 350 LLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYV 428 (557)
Q Consensus 350 ~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~lYv 428 (557)
......-..++... .++++++|+.+ ..+.+||..+..=..+..... . ....+. .++.+++
T Consensus 221 ~~~~~~v~~~~~s~----------~~~~l~~~~~~------~~i~~~~~~~~~~~~~~~~~~--~-v~~~~~~~~~~~l~ 281 (337)
T 1gxr_A 221 HDFTSQIFSLGYCP----------TGEWLAVGMES------SNVEVLHVNKPDKYQLHLHES--C-VLSLKFAYCGKWFV 281 (337)
T ss_dssp EECSSCEEEEEECT----------TSSEEEEEETT------SCEEEEETTSSCEEEECCCSS--C-EEEEEECTTSSEEE
T ss_pred ecCCCceEEEEECC----------CCCEEEEEcCC------CcEEEEECCCCCeEEEcCCcc--c-eeEEEECCCCCEEE
Confidence 11111111122111 13677777643 358899988775433322111 1 122222 3466566
Q ss_pred EecC-CeEEEEECCCCcE
Q 035526 429 YSET-EKLAGYYIERGFW 445 (557)
Q Consensus 429 ~GG~-~~i~~YD~~~~~W 445 (557)
.++. ..+..||+.++.-
T Consensus 282 ~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 282 STGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp EEETTSEEEEEETTTCCE
T ss_pred EecCCCcEEEEECCCCeE
Confidence 6654 5899999887653
No 53
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.64 E-value=3 Score=46.55 Aligned_cols=201 Identities=9% Similarity=-0.006 Sum_probs=96.4
Q ss_pred CeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-C--CEEEEEcccCCCCCCccccCCcccccceE
Q 035526 191 PWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-M--DDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 191 ~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~--~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
+.+++.|+.+ ..+..||....++..+..+......-.+++.. + +.+++.|+.++ .+
T Consensus 21 g~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg----------------~I 79 (753)
T 3jro_A 21 GKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG----------------KV 79 (753)
T ss_dssp SCCEEEEETT-----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS----------------CE
T ss_pred CCeEEEEECC-----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC----------------eE
Confidence 3345555532 35788888777776655543321222334432 3 56777777543 58
Q ss_pred EEEecCCCcEEEcccCCcCcccceEEEEecC--CCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCc
Q 035526 268 LVFSPLTKSWWKVASMRYARSMPILGISEVS--PEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDG 345 (557)
Q Consensus 268 ~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~--g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~ 345 (557)
.+||..+++|..+..+...........+..+ + ..++.|+.+ ..+..||.....
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~----------------~~l~sgs~d---------g~I~vwdl~~~~ 134 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG----------------PLLLVASSD---------GKVSVVEFKENG 134 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC----------------SEEEEEETT---------SEEEEEECCSSS
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCC----------------CEEEEEeCC---------CcEEEEEeecCC
Confidence 8999999888766544332222112222211 2 566666643 234445554432
Q ss_pred ccc--cCCCCCCCceEEEeccch----hhhhhccceEEEEEcccCCCCCCCceEEEEeCCCC--cEEEccCCCCCCcCce
Q 035526 346 FEG--SLLPNRKSYKFIRQKSDQ----SIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDFGVVS 417 (557)
Q Consensus 346 W~~--~~~~~r~~~~~~~~~~d~----~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~--~W~~v~~lp~~~~~~~ 417 (557)
-.. ...........+...... .......++.+++.|+.++ .+.+||..++ .+..+..+........
T Consensus 135 ~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg------~I~iwd~~~~~~~~~~~~~~~~h~~~V~ 208 (753)
T 3jro_A 135 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (753)
T ss_dssp CCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred CcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC------eEEEEeccCCcccceeeeeecCCCCcEE
Confidence 111 000000111111111000 0000000236777777543 4778877554 4554443332222222
Q ss_pred EEEE-EC---CEEEEEecCC-eEEEEECCCC
Q 035526 418 SGVV-CN---GIFYVYSETE-KLAGYYIERG 443 (557)
Q Consensus 418 ~~vv-~~---g~lYv~GG~~-~i~~YD~~~~ 443 (557)
+.+. -+ +.+.+.|+.+ .+..||+.+.
T Consensus 209 ~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred EEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 2232 23 6777777664 7899998764
No 54
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=93.50 E-value=4.7e-05 Score=75.71 Aligned_cols=136 Identities=15% Similarity=0.079 Sum_probs=85.0
Q ss_pred hhhHHHHHHHH---HHHhccCCCCCCCCCcccccccceeeeee--ecCCCceeeeccCCCcCCCCCcccCCCccccCCCC
Q 035526 21 SVSKRLVRSVS---RKLRNKNLRNYDGDDEDDVKGVSLKCLTL--YGRGGGCKVGAETGEECGDSSSRRRSSASEEGKGY 95 (557)
Q Consensus 21 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (557)
.++..+|..|. .+|+....+..|.+++. .....-||+.+ +|...+|.-+...-.+|+..++.. ...+++ |
T Consensus 106 ~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~-~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~-v~~~~~---f 180 (279)
T 3i3n_A 106 RVSTGSVHEVLELADRFLLIRLKEFCGEFLK-KKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHK-VIQDEE---F 180 (279)
T ss_dssp EEETTTHHHHHHHHHHTTCHHHHHHHHHHHH-HHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHH-HTTSSG---G
T ss_pred ccCHHHHHHHHHHHHHHCcHHHHHHHHHHHH-HcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH-HhcCcC---h
Confidence 34555566555 77777778888888877 45677799999 778888875555555555444443 222222 3
Q ss_pred CCCCCC---------cccce-eeeeeeccceeceeeecCCc--cccccccccccCCCCCCCHHHHHHHHhcCCccchhhh
Q 035526 96 KPFCGS---------EEIGV-GVDCFSYGVKEKFWKKSNSK--NLELQDSVRNSRMHIFLPDDTLEMCLVRFPLTSLMNA 163 (557)
Q Consensus 96 ~~~c~~---------e~~~~-~~~~~~~~~~~~~W~~~~~~--~~~l~~l~~~~r~~~~lp~dl~~~il~rLP~~sl~~~ 163 (557)
+.+..+ +..+. ..+.|.. .+.|++|+.+ ..++.++++++|++.+.|++|.+.+.. ..+++.
T Consensus 181 ~~L~~~~l~~lL~~d~L~v~sE~~vf~a---v~~W~~~~~~~r~~~~~~ll~~VRf~l~~~~~L~~~v~~----~~l~~~ 253 (279)
T 3i3n_A 181 YTLPFHLIRDWLSDLEITVDSEEVLFET---VLKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRHVKP----ERLVAN 253 (279)
T ss_dssp GGSCHHHHHHHHTCSSCCCSCHHHHHHH---HHHHHHTTHHHHTTTHHHHHTTSCGGGSCHHHHHHTTTT----SHHHHT
T ss_pred hcCCHHHHHHHhcCcCCCCCCHHHHHHH---HHHHHHcCHHHHHHHHHHHHHhcCCCCCCHHHHHHHhhc----cchhcC
Confidence 332111 10000 1222332 2459999987 589999999999999999998875543 556666
Q ss_pred hhccc
Q 035526 164 RLVCK 168 (557)
Q Consensus 164 ~~vck 168 (557)
...|+
T Consensus 254 ~~~c~ 258 (279)
T 3i3n_A 254 NEVCV 258 (279)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 66664
No 55
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=93.47 E-value=0.98 Score=43.47 Aligned_cols=102 Identities=12% Similarity=-0.051 Sum_probs=68.3
Q ss_pred cEEEEcccccccCCCCcccceeeccccCCcccc--cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceE
Q 035526 316 PRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG--SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSG 393 (557)
Q Consensus 316 ~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~--~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~v 393 (557)
.+|+-.|.. ..+.+..+|+.+.+=.. +++..-.+.+++..++ +||+.... -+.+
T Consensus 32 ~LyestG~~-------g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~-----------~ly~ltw~------~~~v 87 (243)
T 3mbr_X 32 HLYESTGET-------GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRD-----------RLIQLTWR------NHEG 87 (243)
T ss_dssp EEEEEECCT-------TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETT-----------EEEEEESS------SSEE
T ss_pred EEEEECCCC-------CCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCC-----------EEEEEEee------CCEE
Confidence 677776632 24677789998887655 3443334455566665 99998643 4679
Q ss_pred EEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCc
Q 035526 394 EIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGF 444 (557)
Q Consensus 394 e~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~ 444 (557)
.+||+.+-+=. ..++.+..+.+ .+.-+++||+.-|.+.+..+|+++.+
T Consensus 88 ~v~D~~tl~~~--~ti~~~~~Gwg-lt~dg~~L~vSdgs~~l~~iDp~t~~ 135 (243)
T 3mbr_X 88 FVYDLATLTPR--ARFRYPGEGWA-LTSDDSHLYMSDGTAVIRKLDPDTLQ 135 (243)
T ss_dssp EEEETTTTEEE--EEEECSSCCCE-EEECSSCEEEECSSSEEEEECTTTCC
T ss_pred EEEECCcCcEE--EEEeCCCCceE-EeeCCCEEEEECCCCeEEEEeCCCCe
Confidence 99999886543 33333333323 24557789999999999999999865
No 56
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=93.26 E-value=3.6 Score=40.31 Aligned_cols=71 Identities=13% Similarity=0.169 Sum_probs=42.4
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
++.++++|+. ...+..||..+.++..+..+......-.+++.. ++.+++.|+.++ .+.
T Consensus 19 ~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg----------------~i~ 77 (372)
T 1k8k_C 19 DRTQIAICPN-----NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR----------------NAY 77 (372)
T ss_dssp TSSEEEEECS-----SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS----------------CEE
T ss_pred CCCEEEEEeC-----CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC----------------eEE
Confidence 3445556643 246889999888765555443221222334433 566777776443 588
Q ss_pred EEecCCCcEEEcc
Q 035526 269 VFSPLTKSWWKVA 281 (557)
Q Consensus 269 ~ydp~t~~W~~l~ 281 (557)
+||..++++....
T Consensus 78 vwd~~~~~~~~~~ 90 (372)
T 1k8k_C 78 VWTLKGRTWKPTL 90 (372)
T ss_dssp EEEEETTEEEEEE
T ss_pred EEECCCCeeeeeE
Confidence 8998888876543
No 57
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=93.20 E-value=5.7 Score=37.45 Aligned_cols=189 Identities=6% Similarity=-0.066 Sum_probs=95.7
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEE-ECCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~-~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
++.||+.... ...+..||+. +++........ ...-++++. -++.||+..... ..++
T Consensus 25 ~g~l~v~~~~-----~~~v~~~d~~-~~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~----------------~~i~ 81 (299)
T 2z2n_A 25 KGKVWITQHK-----ANMISCINLD-GKITEYPLPTP-DAKVMCLTISSDGEVWFTENAA----------------NKIG 81 (299)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-CCEEEEECSST-TCCEEEEEECTTSCEEEEETTT----------------TEEE
T ss_pred CCCEEEEecC-----CCcEEEEcCC-CCeEEecCCcc-cCceeeEEECCCCCEEEeCCCC----------------CeEE
Confidence 4556664321 2468899998 77765542211 122344544 357888875421 3689
Q ss_pred EEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc
Q 035526 269 VFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (557)
Q Consensus 269 ~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~ 348 (557)
+||+. ++..... ++..-..+....+..+| .+|+..... ..+.+||+ ......
T Consensus 82 ~~~~~-g~~~~~~-~~~~~~~~~~i~~~~~g----------------~l~v~~~~~---------~~i~~~d~-~g~~~~ 133 (299)
T 2z2n_A 82 RITKK-GIIKEYT-LPNPDSAPYGITEGPNG----------------DIWFTEMNG---------NRIGRITD-DGKIRE 133 (299)
T ss_dssp EECTT-SCEEEEE-CSSTTCCEEEEEECTTS----------------CEEEEETTT---------TEEEEECT-TCCEEE
T ss_pred EECCC-CcEEEEe-CCCcCCCceeeEECCCC----------------CEEEEecCC---------ceEEEECC-CCCEEE
Confidence 99986 5555443 12111112122222233 677654211 23445665 333222
Q ss_pred -cCCC-CCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCE
Q 035526 349 -SLLP-NRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGI 425 (557)
Q Consensus 349 -~~~~-~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~ 425 (557)
..+. ......++.-. .+++|+.... ...+.+||+ +++...+. ++.........++ -+|.
T Consensus 134 ~~~~~~~~~~~~i~~~~----------~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~ 195 (299)
T 2z2n_A 134 YELPNKGSYPSFITLGS----------DNALWFTENQ------NNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDA 195 (299)
T ss_dssp EECSSTTCCEEEEEECT----------TSCEEEEETT------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSS
T ss_pred ecCCCCCCCCceEEEcC----------CCCEEEEeCC------CCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCC
Confidence 1111 11122222221 2478876531 246899999 77776642 2222222222233 3578
Q ss_pred EEEEec-CCeEEEEECCCCcEEec
Q 035526 426 FYVYSE-TEKLAGYYIERGFWIGI 448 (557)
Q Consensus 426 lYv~GG-~~~i~~YD~~~~~W~~i 448 (557)
||+... .+.+..||+ ++.+..+
T Consensus 196 l~v~~~~~~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 196 LWFVEIIGNKIGRITT-SGEITEF 218 (299)
T ss_dssp EEEEETTTTEEEEECT-TCCEEEE
T ss_pred EEEEccCCceEEEECC-CCcEEEE
Confidence 998874 468999999 7777654
No 58
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.11 E-value=8 Score=38.87 Aligned_cols=178 Identities=11% Similarity=0.036 Sum_probs=87.1
Q ss_pred ceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCC
Q 035526 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMR 284 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~ 284 (557)
..+..||..+++...+...... ..-.+++.. ++.++++|+.++ .+.+||..+.+-...-.
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~-~~v~~v~~s~~~~~l~~~~~dg----------------~i~iwd~~~~~~~~~~~-- 173 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDES-TYVASVKWSHDGSFLSVGLGNG----------------LVDIYDVESQTKLRTMA-- 173 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTT-CCEEEEEECTTSSEEEEEETTS----------------CEEEEETTTCCEEEEEC--
T ss_pred CeEEEeeCCCCcEeEeeecCCC-CCEEEEEECCCCCEEEEECCCC----------------eEEEEECcCCeEEEEec--
Confidence 4689999998887655443221 222334333 566777776443 58899988775433211
Q ss_pred cCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc-cCCCCCCCceEEEec
Q 035526 285 YARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-SLLPNRKSYKFIRQK 363 (557)
Q Consensus 285 ~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~-~~~~~r~~~~~~~~~ 363 (557)
.... ...++.- ++ ..++.|+.+ ..+..||.....-.. ...........+...
T Consensus 174 ~~~~-~v~~~~~-~~----------------~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 226 (401)
T 4aez_A 174 GHQA-RVGCLSW-NR----------------HVLSSGSRS---------GAIHHHDVRIANHQIGTLQGHSSEVCGLAWR 226 (401)
T ss_dssp CCSS-CEEEEEE-ET----------------TEEEEEETT---------SEEEEEETTSSSCEEEEEECCSSCEEEEEEC
T ss_pred CCCC-ceEEEEE-CC----------------CEEEEEcCC---------CCEEEEecccCcceeeEEcCCCCCeeEEEEc
Confidence 1111 1111111 22 556666543 234455554222111 111111111112221
Q ss_pred cchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEE--CCEEEEEec---CCeEEEE
Q 035526 364 SDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC--NGIFYVYSE---TEKLAGY 438 (557)
Q Consensus 364 ~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~--~g~lYv~GG---~~~i~~Y 438 (557)
. .+.+++.|+.++ .+.+||..+.+=...-. ... ....+.+.. +..+++.|+ ...+..|
T Consensus 227 ~---------~~~~l~s~~~d~------~v~iwd~~~~~~~~~~~-~~~-~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 227 S---------DGLQLASGGNDN------VVQIWDARSSIPKFTKT-NHN-AAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp T---------TSSEEEEEETTS------CEEEEETTCSSEEEEEC-CCS-SCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred C---------CCCEEEEEeCCC------eEEEccCCCCCccEEec-CCc-ceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 1 236778887543 58899998754332211 111 111222332 446777765 3589999
Q ss_pred ECCCCcEE
Q 035526 439 YIERGFWI 446 (557)
Q Consensus 439 D~~~~~W~ 446 (557)
|+.++.-.
T Consensus 290 d~~~~~~~ 297 (401)
T 4aez_A 290 NAATGARV 297 (401)
T ss_dssp ETTTCCEE
T ss_pred ECCCCCEE
Confidence 99876543
No 59
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=93.11 E-value=6.7 Score=38.00 Aligned_cols=62 Identities=8% Similarity=-0.071 Sum_probs=39.3
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECC-EEEEEec-CCeEEEEECCCCcEE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNG-IFYVYSE-TEKLAGYYIERGFWI 446 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g-~lYv~GG-~~~i~~YD~~~~~W~ 446 (557)
.+|+.... ...+.+||+.+.+-...-+.+.+. ..+..-++ .+|+.+. .+.+..||+.+.+..
T Consensus 244 ~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~~---~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 244 RAFITDSK------AAEVLVVDTRNGNILAKVAAPESL---AVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp EEEEEESS------SSEEEEEETTTCCEEEEEECSSCC---CEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEEeCC------CCEEEEEECCCCcEEEEEEcCCCc---eEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 57666532 357999999888765544444331 22233344 5888874 568999999877643
No 60
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=93.02 E-value=5.8 Score=37.02 Aligned_cols=186 Identities=9% Similarity=-0.069 Sum_probs=89.8
Q ss_pred CCeEEE-EeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 190 NPWLFL-FGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 190 ~~~L~v-~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
++.||+ .... ...+..||+.+.....+..... ..-.+++.. ++.|||... . ..+
T Consensus 34 ~g~l~v~~~~~-----~~~i~~~~~~~~~~~~~~~~~~--~~p~~i~~~~~g~l~v~~~-~----------------~~i 89 (270)
T 1rwi_B 34 AGNVYVTSEGM-----YGRVVKLATGSTGTTVLPFNGL--YQPQGLAVDGAGTVYVTDF-N----------------NRV 89 (270)
T ss_dssp TCCEEEEECSS-----SCEEEEECC-----EECCCCSC--CSCCCEEECTTCCEEEEET-T----------------TEE
T ss_pred CCCEEEEccCC-----CCcEEEecCCCcccceEeeCCc--CCcceeEECCCCCEEEEcC-C----------------CEE
Confidence 445777 4221 2468889887766544432211 122344443 567998765 2 268
Q ss_pred EEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCccc
Q 035526 268 LVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFE 347 (557)
Q Consensus 268 ~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~ 347 (557)
.+||+.++....++.... ..+....+..+| .+|+..... ..+.+|+.......
T Consensus 90 ~~~d~~~~~~~~~~~~~~--~~p~~i~~~~~g----------------~l~v~~~~~---------~~i~~~~~~~~~~~ 142 (270)
T 1rwi_B 90 VTLAAGSNNQTVLPFDGL--NYPEGLAVDTQG----------------AVYVADRGN---------NRVVKLAAGSKTQT 142 (270)
T ss_dssp EEECTTCSCCEECCCCSC--SSEEEEEECTTC----------------CEEEEEGGG---------TEEEEECTTCCSCE
T ss_pred EEEeCCCceEeeeecCCc--CCCcceEECCCC----------------CEEEEECCC---------CEEEEEECCCceeE
Confidence 999998876554432111 111122222233 577664321 12334444333222
Q ss_pred c-cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCE
Q 035526 348 G-SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGI 425 (557)
Q Consensus 348 ~-~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~ 425 (557)
. ..........++.-. .++||+.... ...+.+||+.+..-....... .......++ -+|.
T Consensus 143 ~~~~~~~~~p~~i~~~~----------~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~--~~~p~~i~~d~~g~ 204 (270)
T 1rwi_B 143 VLPFTGLNDPDGVAVDN----------SGNVYVTDTD------NNRVVKLEAESNNQVVLPFTD--ITAPWGIAVDEAGT 204 (270)
T ss_dssp ECCCCSCCSCCCEEECT----------TCCEEEEEGG------GTEEEEECTTTCCEEECCCSS--CCSEEEEEECTTCC
T ss_pred eeccccCCCceeEEEeC----------CCCEEEEECC------CCEEEEEecCCCceEeecccC--CCCceEEEECCCCC
Confidence 1 111111223333322 1478887642 246899999877644432111 111122233 3568
Q ss_pred EEEEec-CCeEEEEECCCCc
Q 035526 426 FYVYSE-TEKLAGYYIERGF 444 (557)
Q Consensus 426 lYv~GG-~~~i~~YD~~~~~ 444 (557)
||+... .+.|..||+....
T Consensus 205 l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 205 VYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp EEEEETTTSCEEEECTTCSC
T ss_pred EEEEECCCCcEEEEcCCCCc
Confidence 999874 4589999987654
No 61
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=92.84 E-value=9.4 Score=38.94 Aligned_cols=63 Identities=8% Similarity=-0.019 Sum_probs=40.4
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCcEE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGFWI 446 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~W~ 446 (557)
..++.|+.+ ..+.+||..+..-..... ........+...++.+.+.|+.+.+..||+++++-.
T Consensus 363 ~~l~s~s~d------g~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 363 KFLVSAAAD------GSIRGWDANDYSRKFSYH--HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLV 425 (464)
T ss_dssp SEEEEEETT------SEEEEEETTTCCEEEEEE--CTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEE
T ss_pred CEEEEEeCC------CcEEEEECCCCceeeeec--CCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEE
Confidence 566777654 368899998765332221 111122234556788888888779999999887643
No 62
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=92.75 E-value=9.5 Score=38.80 Aligned_cols=63 Identities=16% Similarity=0.236 Sum_probs=36.8
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCC-CCcCceEEEEECCEEEEEecC-CeEEEEECCCCcE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPV-DFGVVSSGVVCNGIFYVYSET-EKLAGYYIERGFW 445 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~-~~~~~~~~vv~~g~lYv~GG~-~~i~~YD~~~~~W 445 (557)
.+++.|+.++ .+.+||..+.+-...-..+. ...... ++..++.+.+.|+. ..+..||+.+++.
T Consensus 330 ~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 330 NILVSGNADS------TVKIWDIKTGQCLQTLQGPNKHQSAVT-CLQFNKNFVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp TEEEEEETTS------CEEEEETTTCCEEEEECSTTSCSSCEE-EEEECSSEEEEEETTSEEEEEETTTCCE
T ss_pred CEEEEEeCCC------eEEEEECCCCcEEEEEccCCCCCCCEE-EEEECCCEEEEEeCCCeEEEEECCCCce
Confidence 5677777543 58899987765332211111 112222 23446666666665 5899999988764
No 63
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.70 E-value=8.7 Score=38.19 Aligned_cols=60 Identities=18% Similarity=0.280 Sum_probs=42.0
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCC--cEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCc--EEec
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGF--WIGI 448 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~--~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~--W~~i 448 (557)
.||+.+. -..+.+||+.++ .|+.-.. . ....++.++.||+......+.+||+.+++ |+.-
T Consensus 241 ~v~~~~~-------~g~l~~~d~~tG~~~w~~~~~--~----~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 241 VVFALAY-------NGNLTALDLRSGQIMWKRELG--S----VNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp EEEEECT-------TSCEEEEETTTCCEEEEECCC--C----EEEEEEETTEEEEEETTCCEEEEETTTCCEEEEEC
T ss_pred EEEEEec-------CcEEEEEECCCCcEEeeccCC--C----CCCceEECCEEEEEcCCCeEEEEECCCCcEEEeec
Confidence 7777642 135889999876 5875421 1 12346679999999877799999998776 7653
No 64
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.58 E-value=4 Score=39.82 Aligned_cols=61 Identities=13% Similarity=0.151 Sum_probs=34.3
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCC-CcEEEccCCCCCCcCceEEEEE-C----CEEEEEecCC-eEEEEECCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVS-NKWMEIQRLPVDFGVVSSGVVC-N----GIFYVYSETE-KLAGYYIER 442 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t-~~W~~v~~lp~~~~~~~~~vv~-~----g~lYv~GG~~-~i~~YD~~~ 442 (557)
++++.|+.++ .+.+||..+ ..|..+..+........+++.. + +.+.+.|+.+ .+..+|+++
T Consensus 180 ~~l~sgs~D~------~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 180 KRFASGGCDN------LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CBEECCBTTS------BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred ceEEEecCCC------eEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 5677777543 466777763 4687766554322222222221 2 2556666654 788888765
No 65
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.44 E-value=0.9 Score=45.21 Aligned_cols=69 Identities=9% Similarity=0.149 Sum_probs=36.8
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
++.+++.|+.+ ..+..||..++.|..+..+......-.+++.. ++.+++.|+.++ .+.
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~----------------~v~ 80 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR----------------NAY 80 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS----------------SEE
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC----------------eEE
Confidence 44456666542 35778888888887776654332222334433 456667776443 588
Q ss_pred EEecCCCc-EEE
Q 035526 269 VFSPLTKS-WWK 279 (557)
Q Consensus 269 ~ydp~t~~-W~~ 279 (557)
+||..++. |..
T Consensus 81 vwd~~~~~~~~~ 92 (377)
T 3dwl_C 81 VYEKRPDGTWKQ 92 (377)
T ss_dssp EC------CCCC
T ss_pred EEEcCCCCceee
Confidence 88988776 543
No 66
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.12 E-value=9.1 Score=37.10 Aligned_cols=186 Identities=11% Similarity=-0.026 Sum_probs=101.9
Q ss_pred CeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEE
Q 035526 191 PWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVF 270 (557)
Q Consensus 191 ~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~y 270 (557)
+.||+..|... .+.+..+|+.+++-..--+++.. .+..+++..++.||+..-. .+.+++|
T Consensus 32 g~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~g~~lyv~t~~----------------~~~v~vi 91 (266)
T 2iwa_A 32 DTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDS-YFGEGLTLLNEKLYQVVWL----------------KNIGFIY 91 (266)
T ss_dssp TEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEETT----------------CSEEEEE
T ss_pred CeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCC-cceEEEEEeCCEEEEEEec----------------CCEEEEE
Confidence 68898766322 35799999999885543333322 4556788889999999642 3479999
Q ss_pred ecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccccC
Q 035526 271 SPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSL 350 (557)
Q Consensus 271 dp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~~~ 350 (557)
|+.|.+=. ...+.+ .....++.. +| ..+|+.-|. +.+...|+.+.+-....
T Consensus 92 D~~t~~v~--~~i~~g-~~~g~glt~-Dg---------------~~l~vs~gs----------~~l~viD~~t~~v~~~I 142 (266)
T 2iwa_A 92 DRRTLSNI--KNFTHQ-MKDGWGLAT-DG---------------KILYGSDGT----------SILYEIDPHTFKLIKKH 142 (266)
T ss_dssp ETTTTEEE--EEEECC-SSSCCEEEE-CS---------------SSEEEECSS----------SEEEEECTTTCCEEEEE
T ss_pred ECCCCcEE--EEEECC-CCCeEEEEE-CC---------------CEEEEECCC----------CeEEEEECCCCcEEEEE
Confidence 99876432 222222 111233333 22 267766542 34556777665433321
Q ss_pred CCCC------CCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCc---EEEccCCC-------CCC-
Q 035526 351 LPNR------KSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNK---WMEIQRLP-------VDF- 413 (557)
Q Consensus 351 ~~~r------~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~---W~~v~~lp-------~~~- 413 (557)
+... ....+...+ +++|+--. ..+.+-+-|+.+++ |-.++.+. .+.
T Consensus 143 ~Vg~~~~p~~~~nele~~d-----------g~lyvn~~------~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~ 205 (266)
T 2iwa_A 143 NVKYNGHRVIRLNELEYIN-----------GEVWANIW------QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDI 205 (266)
T ss_dssp ECEETTEECCCEEEEEEET-----------TEEEEEET------TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTC
T ss_pred EECCCCcccccceeEEEEC-----------CEEEEecC------CCCeEEEEECCCCcEEEEEECCCccccccccccccc
Confidence 1110 011122223 27776542 24689999999885 33332110 000
Q ss_pred cCceEEEEE--CCEEEEEecC-CeEEEEECCC
Q 035526 414 GVVSSGVVC--NGIFYVYSET-EKLAGYYIER 442 (557)
Q Consensus 414 ~~~~~~vv~--~g~lYv~GG~-~~i~~YD~~~ 442 (557)
......++. ++++||.|+. +.+...++..
T Consensus 206 ~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 206 DVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp CCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 111122333 4689999975 5777777654
No 67
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=92.09 E-value=8.9 Score=36.92 Aligned_cols=67 Identities=13% Similarity=0.032 Sum_probs=41.6
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEE-ECCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~-~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
++.||++... ...++.||+.++....... +. +. .+++. -++.+|+..+ ..++
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~-~~--~~-~~i~~~~dG~l~v~~~------------------~~l~ 76 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTM-DA--PV-SSVALRQSGGYVATIG------------------TKFC 76 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEEC-SS--CE-EEEEEBTTSSEEEEET------------------TEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeC-CC--ce-EEEEECCCCCEEEEEC------------------CeEE
Confidence 4567776542 3568999999887644332 21 11 23333 3566666431 3699
Q ss_pred EEecCCCcEEEcccC
Q 035526 269 VFSPLTKSWWKVASM 283 (557)
Q Consensus 269 ~ydp~t~~W~~l~~m 283 (557)
+||+.+++++.+...
T Consensus 77 ~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 77 ALNWKEQSAVVLATV 91 (297)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEECCCCcEEEEEec
Confidence 999999998876544
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=91.85 E-value=10 Score=37.56 Aligned_cols=69 Identities=10% Similarity=-0.047 Sum_probs=40.4
Q ss_pred eEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEEC--CEEEEEcccCCCCCCccccCCcccccceEEE
Q 035526 192 WLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIM--DDVYVVGGCSSLTSFGRVDGSSFKTHKRVLV 269 (557)
Q Consensus 192 ~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~--~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ 269 (557)
.+++.|+.+ ..+..||..+.+.............-.+++... +.+++.|+.+ ..+.+
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----------------~~i~i 145 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR----------------GATTL 145 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT----------------TEEEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC----------------CEEEE
Confidence 466666543 358899998887665443211112233444443 3666666643 26888
Q ss_pred EecCCCcEEEcc
Q 035526 270 FSPLTKSWWKVA 281 (557)
Q Consensus 270 ydp~t~~W~~l~ 281 (557)
||..++....+.
T Consensus 146 wd~~~~~~~~~~ 157 (383)
T 3ei3_B 146 RDFSGSVIQVFA 157 (383)
T ss_dssp EETTSCEEEEEE
T ss_pred EECCCCceEEEe
Confidence 998876665554
No 69
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=91.65 E-value=8.5 Score=37.95 Aligned_cols=22 Identities=14% Similarity=0.268 Sum_probs=15.4
Q ss_pred CCEEEEEecC-CeEEEEECCCCc
Q 035526 423 NGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 423 ~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
++...+.|+. ..+..||+.+..
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCEEEEecCCCeEEEEECCCCc
Confidence 5555555554 589999998765
No 70
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=91.63 E-value=12 Score=37.27 Aligned_cols=62 Identities=10% Similarity=-0.019 Sum_probs=36.5
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCC----CcCceEEEEE-CC-EEEEEecCC----eEEEEECCCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVD----FGVVSSGVVC-NG-IFYVYSETE----KLAGYYIERG 443 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~----~~~~~~~vv~-~g-~lYv~GG~~----~i~~YD~~~~ 443 (557)
.+++.|+.+ ..+.+||..+.+-...-..+.. .......+.. ++ .+++.|+.+ .+..||+.+.
T Consensus 179 ~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 179 HVFASAGSS------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp TEEEEESSS------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred cEEEEEcCC------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 677777754 3589999988765544333211 1111222332 33 466666654 8999999875
No 71
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=91.33 E-value=13 Score=37.16 Aligned_cols=63 Identities=11% Similarity=-0.024 Sum_probs=35.0
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCE-EEEEecC-CeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGI-FYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~-lYv~GG~-~~i~~YD~~~~~ 444 (557)
+++++.|+.++ .+.+||..+.+-...-....... ..+.+. -++. +++.|+. ..+..||+.+..
T Consensus 259 ~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 259 GKYVIAGHVSG------VITVHNVFSKEQTIQLPSKFTCS-CNSLTVDGNNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp TEEEEEEETTS------CEEEEETTTCCEEEEECCTTSSC-EEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred CCEEEEEcCCC------eEEEEECCCCceeEEcccccCCC-ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 47777777543 58999998765332221111111 122222 2444 5555555 589999997653
No 72
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=91.30 E-value=6.8 Score=38.64 Aligned_cols=60 Identities=13% Similarity=0.115 Sum_probs=35.9
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCEEEEEecCC-eEEEEEC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSETE-KLAGYYI 440 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~lYv~GG~~-~i~~YD~ 440 (557)
+.+++.|+.++ .+.+||..++.|..+..+........+.+. -++.+.+.|+.+ .+..||.
T Consensus 162 ~~~l~s~s~d~------~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 162 QELLASASYDD------TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SSCEEEEETTS------CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCEEEEEeCCC------cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 36777777543 588899988888765444322222222222 356666666654 6777774
No 73
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=91.19 E-value=10 Score=35.72 Aligned_cols=188 Identities=8% Similarity=-0.051 Sum_probs=93.5
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
++.+|+.... ...+..||+. +++..+.. +.....-++++.. ++.||+.... ...++
T Consensus 72 ~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~----------------~~~i~ 128 (300)
T 2qc5_A 72 LGDIWFTENG-----ANKIGKLSKK-GGFTEYPL-PQPDSGPYGITEGLNGDIWFTQLN----------------GDRIG 128 (300)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEEC-SSTTCCEEEEEECSTTCEEEEETT----------------TTEEE
T ss_pred CCCEEEEecC-----CCeEEEECCC-CCeEEecC-CCCCCCCccceECCCCCEEEEccC----------------CCeEE
Confidence 4556665421 2458899988 66654432 1111233455544 6788887532 13689
Q ss_pred EEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc
Q 035526 269 VFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (557)
Q Consensus 269 ~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~ 348 (557)
+||+. ++..... ++..-..+....+..+| .+|+.... ...+.+||+ ......
T Consensus 129 ~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g----------------~l~v~~~~---------~~~i~~~~~-~g~~~~ 180 (300)
T 2qc5_A 129 KLTAD-GTIYEYD-LPNKGSYPAFITLGSDN----------------ALWFTENQ---------NNSIGRITN-TGKLEE 180 (300)
T ss_dssp EECTT-SCEEEEE-CSSTTCCEEEEEECTTS----------------SEEEEETT---------TTEEEEECT-TCCEEE
T ss_pred EECCC-CCEEEcc-CCCCCCCceeEEECCCC----------------CEEEEecC---------CCeEEEECC-CCcEEE
Confidence 99987 6655432 12111122222233233 56665421 123445665 333332
Q ss_pred -cCCCCC-CCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCE
Q 035526 349 -SLLPNR-KSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGI 425 (557)
Q Consensus 349 -~~~~~r-~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~ 425 (557)
..+..- ....++ ... .+.||+.... ...+.+||+ ++++.... ++.........++ -+|.
T Consensus 181 ~~~~~~~~~~~~i~-~d~---------~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~ 242 (300)
T 2qc5_A 181 YPLPTNAAAPVGIT-SGN---------DGALWFVEIM------GNKIGRITT-TGEISEYD-IPTPNARPHAITAGKNSE 242 (300)
T ss_dssp EECSSTTCCEEEEE-ECT---------TSSEEEEETT------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTC
T ss_pred eeCCCCCCCcceEE-ECC---------CCCEEEEccC------CCEEEEEcC-CCcEEEEE-CCCCCCCceEEEECCCCC
Confidence 111111 112222 221 2478876532 246889998 66666543 2222222222222 3678
Q ss_pred EEEEec-CCeEEEEECCCCcEEe
Q 035526 426 FYVYSE-TEKLAGYYIERGFWIG 447 (557)
Q Consensus 426 lYv~GG-~~~i~~YD~~~~~W~~ 447 (557)
||+... .+.|..||+ +++...
T Consensus 243 l~v~~~~~~~i~~~~~-~g~~~~ 264 (300)
T 2qc5_A 243 IWFTEWGANQIGRITN-DNTIQE 264 (300)
T ss_dssp EEEEETTTTEEEEECT-TSCEEE
T ss_pred EEEeccCCCeEEEECC-CCcEEE
Confidence 999874 468999998 455443
No 74
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=90.87 E-value=11 Score=35.50 Aligned_cols=189 Identities=10% Similarity=-0.006 Sum_probs=95.9
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
++.||+.... ...+..||+. .+...+.. +.....-++++.. ++.||+.... ...+.
T Consensus 30 ~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~----------------~~~v~ 86 (300)
T 2qc5_A 30 DGKVWFTQHK-----ANKISSLDQS-GRIKEFEV-PTPDAKVMCLIVSSLGDIWFTENG----------------ANKIG 86 (300)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEEC-SSTTCCEEEEEECTTSCEEEEETT----------------TTEEE
T ss_pred CCCEEEEcCC-----CCeEEEECCC-CceEEEEC-CCCCCcceeEEECCCCCEEEEecC----------------CCeEE
Confidence 4567775421 2468899988 76655432 1111223344443 5788887532 23689
Q ss_pred EEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc
Q 035526 269 VFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (557)
Q Consensus 269 ~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~ 348 (557)
+||+. +++..... +..-..+....+..+| .+|+..... +.+.+||+. .....
T Consensus 87 ~~d~~-g~~~~~~~-~~~~~~~~~i~~~~~g----------------~l~v~~~~~---------~~i~~~~~~-g~~~~ 138 (300)
T 2qc5_A 87 KLSKK-GGFTEYPL-PQPDSGPYGITEGLNG----------------DIWFTQLNG---------DRIGKLTAD-GTIYE 138 (300)
T ss_dssp EECTT-SCEEEEEC-SSTTCCEEEEEECSTT----------------CEEEEETTT---------TEEEEECTT-SCEEE
T ss_pred EECCC-CCeEEecC-CCCCCCCccceECCCC----------------CEEEEccCC---------CeEEEECCC-CCEEE
Confidence 99998 77664431 1111222222222233 677654311 234456655 33222
Q ss_pred -cCCC-CCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCE
Q 035526 349 -SLLP-NRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGI 425 (557)
Q Consensus 349 -~~~~-~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~ 425 (557)
..+. ......++.-. .++||+.... ...+.+||+ +++...+. ++.........++ -+|.
T Consensus 139 ~~~~~~~~~~~~i~~d~----------~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~ 200 (300)
T 2qc5_A 139 YDLPNKGSYPAFITLGS----------DNALWFTENQ------NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGA 200 (300)
T ss_dssp EECSSTTCCEEEEEECT----------TSSEEEEETT------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSS
T ss_pred ccCCCCCCCceeEEECC----------CCCEEEEecC------CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCC
Confidence 2221 11222222222 1477776532 246889999 67776643 2322222222233 2678
Q ss_pred EEEEec-CCeEEEEECCCCcEEec
Q 035526 426 FYVYSE-TEKLAGYYIERGFWIGI 448 (557)
Q Consensus 426 lYv~GG-~~~i~~YD~~~~~W~~i 448 (557)
||+... .+.+..||+ ++.+..+
T Consensus 201 l~v~~~~~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 201 LWFVEIMGNKIGRITT-TGEISEY 223 (300)
T ss_dssp EEEEETTTTEEEEECT-TCCEEEE
T ss_pred EEEEccCCCEEEEEcC-CCcEEEE
Confidence 999874 357999999 5666554
No 75
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=90.76 E-value=11 Score=35.52 Aligned_cols=189 Identities=9% Similarity=-0.015 Sum_probs=92.0
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
++.||+.+... ...+..||+.......+..... ..-.+++.. ++.|||.... ...+.
T Consensus 88 ~g~l~v~~~~~----~~~i~~~d~~g~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~----------------~~~i~ 145 (286)
T 1q7f_A 88 SGDIIVTERSP----THQIQIYNQYGQFVRKFGATIL--QHPRGVTVDNKGRIIVVECK----------------VMRVI 145 (286)
T ss_dssp TTEEEEEECGG----GCEEEEECTTSCEEEEECTTTC--SCEEEEEECTTSCEEEEETT----------------TTEEE
T ss_pred CCeEEEEcCCC----CCEEEEECCCCcEEEEecCccC--CCceEEEEeCCCCEEEEECC----------------CCEEE
Confidence 56777765321 2468889955444333332111 122344443 5789987542 23789
Q ss_pred EEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc
Q 035526 269 VFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (557)
Q Consensus 269 ~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~ 348 (557)
+||+..+....+.... .-..+....+..+| .+|+....+ +.+.+||+.......
T Consensus 146 ~~~~~g~~~~~~~~~~-~~~~p~~i~~~~~g----------------~l~v~~~~~---------~~i~~~~~~g~~~~~ 199 (286)
T 1q7f_A 146 IFDQNGNVLHKFGCSK-HLEFPNGVVVNDKQ----------------EIFISDNRA---------HCVKVFNYEGQYLRQ 199 (286)
T ss_dssp EECTTSCEEEEEECTT-TCSSEEEEEECSSS----------------EEEEEEGGG---------TEEEEEETTCCEEEE
T ss_pred EEcCCCCEEEEeCCCC-ccCCcEEEEECCCC----------------CEEEEECCC---------CEEEEEcCCCCEEEE
Confidence 9998765444442111 11112222333233 577765321 245566654332111
Q ss_pred -cCCC-CCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccC-CCCCCcCceEEEEECCE
Q 035526 349 -SLLP-NRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQR-LPVDFGVVSSGVVCNGI 425 (557)
Q Consensus 349 -~~~~-~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~-lp~~~~~~~~~vv~~g~ 425 (557)
...- ......++.-. .++||+....+. ..+.+||+....-..+.. .+.... ...+..-+|.
T Consensus 200 ~~~~g~~~~p~~i~~d~----------~G~l~v~~~~~~-----~~i~~~~~~g~~~~~~~~~~~~~~~-~~i~~~~~g~ 263 (286)
T 1q7f_A 200 IGGEGITNYPIGVGINS----------NGEILIADNHNN-----FNLTIFTQDGQLISALESKVKHAQC-FDVALMDDGS 263 (286)
T ss_dssp ESCTTTSCSEEEEEECT----------TCCEEEEECSSS-----CEEEEECTTSCEEEEEEESSCCSCE-EEEEEETTTE
T ss_pred EccCCccCCCcEEEECC----------CCCEEEEeCCCC-----EEEEEECCCCCEEEEEcccCCCCcc-eeEEECCCCc
Confidence 1110 01112232222 247888775321 268999986554333322 111111 1222334789
Q ss_pred EEEEecCCeEEEEECCC
Q 035526 426 FYVYSETEKLAGYYIER 442 (557)
Q Consensus 426 lYv~GG~~~i~~YD~~~ 442 (557)
|||....+.|..|+...
T Consensus 264 l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 264 VVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEETTTEEEEEECSC
T ss_pred EEEECCCCeEEEEEccc
Confidence 99997666888888644
No 76
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=90.76 E-value=5.8 Score=39.49 Aligned_cols=58 Identities=9% Similarity=-0.061 Sum_probs=34.0
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE--ECCEEEEEecCC-eEEEEECCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV--CNGIFYVYSETE-KLAGYYIER 442 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv--~~g~lYv~GG~~-~i~~YD~~~ 442 (557)
++++.|+.++ .+.+||..+.+-... +.... ...+++. .++.+++.||.+ .|..+|+.+
T Consensus 283 ~~lasgs~D~------~i~iwd~~~~~~~~~--~~H~~-~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 283 PFLASISEDC------TVAVLDADFSEVFRD--LSHRD-FVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp CCEEEEETTS------CEEEECTTSCEEEEE--CCCSS-CEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred CEEEEEeCCC------EEEEEECCCCcEeEE--CCCCC-CEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 5667776543 588999988754432 22221 1223333 267777777764 788888754
No 77
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=90.49 E-value=6.4 Score=40.09 Aligned_cols=59 Identities=12% Similarity=0.128 Sum_probs=34.9
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC-CeEEEEECCCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET-EKLAGYYIERG 443 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~-~~i~~YD~~~~ 443 (557)
.+++.|+.++ .+.+||..+.+-... +........+ +..++.+.+.|+. ..|..||+.+.
T Consensus 307 ~~l~~g~~dg------~i~iwd~~~~~~~~~--~~~h~~~v~~-~~~~~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 307 RLVVSGSSDN------TIRLWDIECGACLRV--LEGHEELVRC-IRFDNKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp TEEEEEETTS------CEEEEETTTCCEEEE--ECCCSSCEEE-EECCSSEEEEEETTSCEEEEEHHHH
T ss_pred CEEEEEeCCC------eEEEEECCCCCEEEE--EeCCcCcEEE-EEecCCEEEEEeCCCcEEEEECCCC
Confidence 6777777543 589999987643222 2211122222 3447777777765 47899997543
No 78
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=90.17 E-value=5.1 Score=38.91 Aligned_cols=70 Identities=11% Similarity=0.022 Sum_probs=42.4
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
++.||+.+.. ...++.||+.+++...+...+. ..-.+++.. ++.+|+....... ....++
T Consensus 55 ~g~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~--~~~~~i~~~~dg~l~v~~~~~~~------------~~~~i~ 115 (333)
T 2dg1_A 55 QGQLFLLDVF-----EGNIFKINPETKEIKRPFVSHK--ANPAAIKIHKDGRLFVCYLGDFK------------STGGIF 115 (333)
T ss_dssp TSCEEEEETT-----TCEEEEECTTTCCEEEEEECSS--SSEEEEEECTTSCEEEEECTTSS------------SCCEEE
T ss_pred CCCEEEEECC-----CCEEEEEeCCCCcEEEEeeCCC--CCcceEEECCCCcEEEEeCCCCC------------CCceEE
Confidence 4557776543 2468999999988776542211 222344443 6788887542211 124799
Q ss_pred EEecCCCcEE
Q 035526 269 VFSPLTKSWW 278 (557)
Q Consensus 269 ~ydp~t~~W~ 278 (557)
+||+.++...
T Consensus 116 ~~d~~~~~~~ 125 (333)
T 2dg1_A 116 AATENGDNLQ 125 (333)
T ss_dssp EECTTSCSCE
T ss_pred EEeCCCCEEE
Confidence 9999888765
No 79
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=90.00 E-value=8.5 Score=39.27 Aligned_cols=71 Identities=10% Similarity=0.007 Sum_probs=39.8
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE--CCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~--~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
++.+++.|+.+ ..|..+|..+..-..+-........-.+++.. ++.+++.|+.++ .+
T Consensus 131 ~~~~lasGs~d-----g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~----------------~v 189 (435)
T 4e54_B 131 HPSTVAVGSKG-----GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG----------------TT 189 (435)
T ss_dssp CTTCEEEEETT-----SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS----------------CE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC----------------EE
Confidence 45566777643 35888888776543332221111222344443 456677776543 57
Q ss_pred EEEecCCCcEEEcc
Q 035526 268 LVFSPLTKSWWKVA 281 (557)
Q Consensus 268 ~~ydp~t~~W~~l~ 281 (557)
-+||..++....+.
T Consensus 190 ~iwd~~~~~~~~~~ 203 (435)
T 4e54_B 190 RLQDFKGNILRVFA 203 (435)
T ss_dssp EEEETTSCEEEEEE
T ss_pred EEeeccCCceeEEe
Confidence 88898877665443
No 80
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=89.98 E-value=0.089 Score=52.10 Aligned_cols=42 Identities=17% Similarity=0.127 Sum_probs=38.0
Q ss_pred CCCCCHHHHHHHHhcCCccchhhhhhcccccccccCChhhhh
Q 035526 140 HIFLPDDTLEMCLVRFPLTSLMNARLVCKKWRYLTTTPRFLQ 181 (557)
Q Consensus 140 ~~~lp~dl~~~il~rLP~~sl~~~~~vck~W~~l~~sp~~~~ 181 (557)
+..||+|++..||+.|++.++.++..|||+|+.++..+.+.+
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr 46 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWR 46 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHH
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHH
Confidence 346899999999999999999999999999999999987654
No 81
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=89.84 E-value=13 Score=34.97 Aligned_cols=62 Identities=6% Similarity=-0.015 Sum_probs=36.8
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCEEEEEecC-C-eEEEEECCCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSET-E-KLAGYYIERG 443 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~lYv~GG~-~-~i~~YD~~~~ 443 (557)
++||+.+.. ...+.+||+....-..+..-. ........++ -+|.|||.... + .|..||++..
T Consensus 175 g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~g-~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 175 QEIFISDNR------AHCVKVFNYEGQYLRQIGGEG-ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ 239 (286)
T ss_dssp SEEEEEEGG------GTEEEEEETTCCEEEEESCTT-TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC
T ss_pred CCEEEEECC------CCEEEEEcCCCCEEEEEccCC-ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC
Confidence 488887653 247899998766444443211 0111122222 46889998854 3 8999997654
No 82
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=89.52 E-value=5.8 Score=38.28 Aligned_cols=69 Identities=13% Similarity=0.050 Sum_probs=39.8
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcE-EEccCCCCCCcCceEEEEECCE-EEEEec-CCeEEEEECCCCcEEeccC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKW-MEIQRLPVDFGVVSSGVVCNGI-FYVYSE-TEKLAGYYIERGFWIGIQT 450 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W-~~v~~lp~~~~~~~~~vv~~g~-lYv~GG-~~~i~~YD~~~~~W~~i~~ 450 (557)
.+|+.+.. -..+.+||+.+.+. +.+..++........+..-+|+ ||+... .+.+..||+++++...+..
T Consensus 189 ~l~v~~~~------~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~ 260 (331)
T 3u4y_A 189 FAFVANLI------GNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKS 260 (331)
T ss_dssp EEEEEETT------TTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEeCC------CCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecc
Confidence 47776642 24699999988765 1122222222212222333555 777754 3579999999888755543
No 83
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=89.12 E-value=9.4 Score=42.48 Aligned_cols=62 Identities=15% Similarity=0.204 Sum_probs=39.1
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEE-C--CEEEEEecC-CeEEEEECCCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-N--GIFYVYSET-EKLAGYYIERG 443 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~-~--g~lYv~GG~-~~i~~YD~~~~ 443 (557)
.+++.|+.++ .+.+||..+++|..+..+........+.+.. + +.+++.|+. ..+..||+.+.
T Consensus 68 ~~l~s~s~Dg------~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 68 TILASCSYDG------KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp SEEEEEETTS------CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred CEEEEEeCCC------eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 5666776543 5888999998887776544333332333332 2 555566655 58999998776
No 84
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=89.03 E-value=20 Score=37.60 Aligned_cols=61 Identities=10% Similarity=0.063 Sum_probs=34.7
Q ss_pred CCceEEEEeCCCCcEEEccCCCCCCcC-ceEEEEE-----CCEEEEEec-----C-CeEEEEECCCCcEEeccCC
Q 035526 389 PLDSGEIYDSVSNKWMEIQRLPVDFGV-VSSGVVC-----NGIFYVYSE-----T-EKLAGYYIERGFWIGIQTS 451 (557)
Q Consensus 389 ~l~~ve~YD~~t~~W~~v~~lp~~~~~-~~~~vv~-----~g~lYv~GG-----~-~~i~~YD~~~~~W~~i~~~ 451 (557)
..+.+.+||..+. +.+..++.+..+ ....+.. +..+||... . +.|..|..+.+.|..++..
T Consensus 226 ~~d~V~v~D~~~~--k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vI 298 (462)
T 2ece_A 226 YGNRIHFWDLRKR--KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVI 298 (462)
T ss_dssp SCCEEEEEETTTT--EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEE
T ss_pred cCCEEEEEECCCC--cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEE
Confidence 3689999999876 444443332111 0111112 457888876 4 3666555555888876653
No 85
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=89.01 E-value=26 Score=39.00 Aligned_cols=55 Identities=7% Similarity=0.074 Sum_probs=37.6
Q ss_pred eEEEEeCCCCcEEEcc---CCCCCCcCceEEEE-ECCEEEEEecCCeEEEEECCCCcEEecc
Q 035526 392 SGEIYDSVSNKWMEIQ---RLPVDFGVVSSGVV-CNGIFYVYSETEKLAGYYIERGFWIGIQ 449 (557)
Q Consensus 392 ~ve~YD~~t~~W~~v~---~lp~~~~~~~~~vv-~~g~lYv~GG~~~i~~YD~~~~~W~~i~ 449 (557)
-+.+||+.+++++... .+|.... .+.+. -+|.|++.+ .+.+.+||++++++....
T Consensus 563 Gl~~~d~~~~~~~~~~~~~gl~~~~i--~~i~~d~~g~lWi~t-~~Gl~~~~~~~~~~~~~~ 621 (795)
T 4a2l_A 563 GFYCFNEKDKQIKRYNTTNGLPNNVV--YGILEDSFGRLWLST-NRGISCFNPETEKFRNFT 621 (795)
T ss_dssp CEEEEETTTTEEEEECGGGTCSCSCE--EEEEECTTSCEEEEE-TTEEEEEETTTTEEEEEC
T ss_pred CceeECCCCCcEEEeCCCCCCchhhe--EEEEECCCCCEEEEc-CCceEEEcCCCCcEEEcC
Confidence 3789999999988763 2443321 22222 257787766 468999999999988654
No 86
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=89.00 E-value=19 Score=35.61 Aligned_cols=61 Identities=10% Similarity=-0.066 Sum_probs=33.3
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECC-EEEEEecC-CeEEEEECCCCc
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNG-IFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g-~lYv~GG~-~~i~~YD~~~~~ 444 (557)
.+++.|+.++ .+.+||..+.+= +..+........+.++ .++ .+.+.|+. ..|..||.++++
T Consensus 240 ~~la~g~~d~------~i~~wd~~~~~~--~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 240 DTFACGDETG------NVSLVNIKNPDS--AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp TEEEEEESSS------CEEEEESSCGGG--CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred ceEEEeeccc------ceeEEECCCCcE--eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 6788887543 588899876531 1111111111122233 244 55555655 478999987765
No 87
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=88.84 E-value=4 Score=39.69 Aligned_cols=99 Identities=7% Similarity=-0.252 Sum_probs=64.5
Q ss_pred cEEEEcccccccCCCCcccceeeccccCCcccccCCCCCCC--ceEEEeccchhhhhhccceEEEEEcccCCCCCCCceE
Q 035526 316 PRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPNRKS--YKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSG 393 (557)
Q Consensus 316 ~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~~~~~~r~~--~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~v 393 (557)
.+|+..|.. ..+..+|+.+.+=.... .+... .+++..++ +||+.... -+.+
T Consensus 66 ~Ly~stG~~---------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~-----------~Ly~ltw~------~~~v 118 (268)
T 3nok_A 66 HFFESTGHQ---------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGE-----------RLYQLTWT------EGLL 118 (268)
T ss_dssp EEEEEETTT---------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSS-----------CEEEEESS------SCEE
T ss_pred EEEEEcCCC---------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCC-----------EEEEEEcc------CCEE
Confidence 677777742 12777888877655533 32232 33555554 89998653 3579
Q ss_pred EEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCc
Q 035526 394 EIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGF 444 (557)
Q Consensus 394 e~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~ 444 (557)
.+||+++.+=.. .++.+..+.+ .+.-++.||+..|.+.+..+|+++.+
T Consensus 119 ~V~D~~Tl~~~~--ti~~~~eGwG-Lt~Dg~~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 119 FTWSGMPPQRER--TTRYSGEGWG-LCYWNGKLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp EEEETTTTEEEE--EEECSSCCCC-EEEETTEEEEECSSSEEEEECTTTCC
T ss_pred EEEECCcCcEEE--EEeCCCceeE-EecCCCEEEEECCCCEEEEEcCCCCe
Confidence 999998865443 2222222223 24568899999999999999999865
No 88
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=88.35 E-value=16 Score=33.89 Aligned_cols=185 Identities=8% Similarity=-0.050 Sum_probs=91.8
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
++.||+... ...+..||+.......+..... ..-.+++.. ++.||+..... ..++
T Consensus 77 ~g~l~v~~~------~~~i~~~d~~~~~~~~~~~~~~--~~p~~i~~~~~g~l~v~~~~~----------------~~i~ 132 (270)
T 1rwi_B 77 AGTVYVTDF------NNRVVTLAAGSNNQTVLPFDGL--NYPEGLAVDTQGAVYVADRGN----------------NRVV 132 (270)
T ss_dssp TCCEEEEET------TTEEEEECTTCSCCEECCCCSC--SSEEEEEECTTCCEEEEEGGG----------------TEEE
T ss_pred CCCEEEEcC------CCEEEEEeCCCceEeeeecCCc--CCCcceEECCCCCEEEEECCC----------------CEEE
Confidence 345777653 2368899988876554432211 122345444 67899875422 3688
Q ss_pred EEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc
Q 035526 269 VFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG 348 (557)
Q Consensus 269 ~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~ 348 (557)
+||+.+............ .+....+..+| .+|+..... +.+.+||+....-..
T Consensus 133 ~~~~~~~~~~~~~~~~~~--~p~~i~~~~~g----------------~l~v~~~~~---------~~i~~~~~~~~~~~~ 185 (270)
T 1rwi_B 133 KLAAGSKTQTVLPFTGLN--DPDGVAVDNSG----------------NVYVTDTDN---------NRVVKLEAESNNQVV 185 (270)
T ss_dssp EECTTCCSCEECCCCSCC--SCCCEEECTTC----------------CEEEEEGGG---------TEEEEECTTTCCEEE
T ss_pred EEECCCceeEeeccccCC--CceeEEEeCCC----------------CEEEEECCC---------CEEEEEecCCCceEe
Confidence 888776655433221111 11112222233 577665321 234456655443221
Q ss_pred -cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCEE
Q 035526 349 -SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIF 426 (557)
Q Consensus 349 -~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~l 426 (557)
..........++.-. .+.||+.... ...+.+||+.+..-..... .........++ -+|.|
T Consensus 186 ~~~~~~~~p~~i~~d~----------~g~l~v~~~~------~~~v~~~~~~~~~~~~~~~--~~~~~p~~i~~~~~g~l 247 (270)
T 1rwi_B 186 LPFTDITAPWGIAVDE----------AGTVYVTEHN------TNQVVKLLAGSTTSTVLPF--TGLNTPLAVAVDSDRTV 247 (270)
T ss_dssp CCCSSCCSEEEEEECT----------TCCEEEEETT------TSCEEEECTTCSCCEECCC--CSCSCEEEEEECTTCCE
T ss_pred ecccCCCCceEEEECC----------CCCEEEEECC------CCcEEEEcCCCCcceeecc--CCCCCceeEEECCCCCE
Confidence 111111122233222 2478887642 2358899987764333211 11112222233 35789
Q ss_pred EEEec-CCeEEEEECCCC
Q 035526 427 YVYSE-TEKLAGYYIERG 443 (557)
Q Consensus 427 Yv~GG-~~~i~~YD~~~~ 443 (557)
|+... .+.|..|++...
T Consensus 248 ~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 248 YVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp EEEEGGGTEEEEECCCGG
T ss_pred EEEECCCCEEEEEcCCCc
Confidence 99875 468999987543
No 89
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=88.30 E-value=21 Score=35.29 Aligned_cols=59 Identities=10% Similarity=-0.007 Sum_probs=32.3
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEE-C-CEEEEEecCC-eEEEEECCCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-N-GIFYVYSETE-KLAGYYIERG 443 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~-~-g~lYv~GG~~-~i~~YD~~~~ 443 (557)
++++.|+.++ .+.+||..+.+=.... .+. ....+++.. + ..|.+.||.+ .|..+++.++
T Consensus 271 ~~lasgs~D~------~i~vwd~~~~~~~~~~--~H~-~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 271 PFLASLSEDC------SLAVLDSSLSELFRSQ--AHR-DFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp CCEEEEETTS------CEEEECTTCCEEEEEC--CCS-SCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred eEEEEEeCCC------eEEEEECCCCcEEEEc--CCC-CCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 5667777543 5888998877533221 111 112222332 3 4566677754 7888887653
No 90
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=88.14 E-value=0.14 Score=50.94 Aligned_cols=42 Identities=26% Similarity=0.365 Sum_probs=36.9
Q ss_pred cCCCCCCCHHHHHHHHhcCCccchhhhhhcccccccccCChh
Q 035526 137 SRMHIFLPDDTLEMCLVRFPLTSLMNARLVCKKWRYLTTTPR 178 (557)
Q Consensus 137 ~r~~~~lp~dl~~~il~rLP~~sl~~~~~vck~W~~l~~sp~ 178 (557)
.+.+..||+|++..|+.+|+..++.++..|||+|+.+...|.
T Consensus 6 ~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp -CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred cCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 345678999999999999999999999999999999986654
No 91
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=87.71 E-value=16 Score=40.59 Aligned_cols=175 Identities=13% Similarity=0.023 Sum_probs=91.0
Q ss_pred ceEEEeeCCCCceEEccCCC---cCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcc
Q 035526 206 GEIHALDVSQDQWHRIDASI---LKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVA 281 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~p---~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~ 281 (557)
.-++.||+.+++|......+ .....-.+++.. ++.|+|... . ..+++||+.+++++...
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~----------------~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G----------------GGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S----------------SCEEEECTTCCEEEEEC
T ss_pred CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C----------------CCEEEEeCCCCeEEEcc
Confidence 34788999998887654322 111112233332 466776421 1 25889999999988765
Q ss_pred cCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc-----cCCCCCCC
Q 035526 282 SMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-----SLLPNRKS 356 (557)
Q Consensus 282 ~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~-----~~~~~r~~ 356 (557)
....-......+++.... +.+|+... . ..+.+||+..+++.. .++.. .-
T Consensus 532 ~~~~l~~~~i~~i~~d~~---------------g~lWi~T~-~---------Glv~~~d~~~~~~~~~~~~~gl~~~-~i 585 (781)
T 3v9f_A 532 QYEGFCSNTINQIYRSSK---------------GQMWLATG-E---------GLVCFPSARNFDYQVFQRKEGLPNT-HI 585 (781)
T ss_dssp TTTTCSCSCEEEEEECTT---------------SCEEEEET-T---------EEEEESCTTTCCCEEECGGGTCSCC-CC
T ss_pred CCCCCCCCeeEEEEECCC---------------CCEEEEEC-C---------CceEEECCCCCcEEEccccCCCCCc-eE
Confidence 311111222334433211 25555432 1 111356666655443 11111 11
Q ss_pred ceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEcc---CCCCCCcCceEEEEE-CCEEEEEecC
Q 035526 357 YKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQ---RLPVDFGVVSSGVVC-NGIFYVYSET 432 (557)
Q Consensus 357 ~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~---~lp~~~~~~~~~vv~-~g~lYv~GG~ 432 (557)
.+++.-. .|.|++.+. +-+.+|||.+.+++... .++.......+++.. +|.||+ |+.
T Consensus 586 ~~i~~d~----------~g~lW~~t~--------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~ 646 (781)
T 3v9f_A 586 RAISEDK----------NGNIWASTN--------TGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYF-GSI 646 (781)
T ss_dssp CEEEECS----------SSCEEEECS--------SCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEE-EET
T ss_pred EEEEECC----------CCCEEEEcC--------CceEEEECCCCceEEecccCCccccccccCceEECCCCEEEE-ECC
Confidence 2222221 247777652 24788999999888763 244433222233333 566655 666
Q ss_pred CeEEEEECCC
Q 035526 433 EKLAGYYIER 442 (557)
Q Consensus 433 ~~i~~YD~~~ 442 (557)
+.+..|||+.
T Consensus 647 ~Gl~~f~p~~ 656 (781)
T 3v9f_A 647 NGLCFFNPDI 656 (781)
T ss_dssp TEEEEECSCC
T ss_pred CceEEEChhh
Confidence 7899999975
No 92
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=87.50 E-value=3.4 Score=40.83 Aligned_cols=74 Identities=8% Similarity=-0.163 Sum_probs=42.4
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcE--EEccCCCCCCcC-ceEEEEECCEEEEEecCCeEEEEECCCCcEEeccCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKW--MEIQRLPVDFGV-VSSGVVCNGIFYVYSETEKLAGYYIERGFWIGIQTS 451 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W--~~v~~lp~~~~~-~~~~vv~~g~lYv~GG~~~i~~YD~~~~~W~~i~~~ 451 (557)
+++++.|+.+ ..+.+||..+.+- ..+..+...... .+....-++.+.+.|+.+.+..|+.....|.....+
T Consensus 217 ~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
T 3dwl_C 217 GNALAYAGHD------SSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDL 290 (377)
T ss_dssp SSCEEEEETT------TEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---CCSBCC
T ss_pred CCEEEEEeCC------CcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEEEeee
Confidence 3667777654 3577788776542 223222222111 122344588888888888888999998888887776
Q ss_pred CCC
Q 035526 452 PFP 454 (557)
Q Consensus 452 p~p 454 (557)
..+
T Consensus 291 ~~~ 293 (377)
T 3dwl_C 291 DAG 293 (377)
T ss_dssp CSC
T ss_pred ccc
Confidence 544
No 93
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=87.09 E-value=20 Score=34.79 Aligned_cols=61 Identities=15% Similarity=0.209 Sum_probs=33.1
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCc--CceEEEEE---CCEEEEEecCC-eEEEEECCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFG--VVSSGVVC---NGIFYVYSETE-KLAGYYIER 442 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~--~~~~~vv~---~g~lYv~GG~~-~i~~YD~~~ 442 (557)
.+++.||.++ .+.+||..++.|+.+........ ...+.+.. ++.+.+.|+.+ .+..+|+++
T Consensus 262 ~~l~s~~~dg------~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 262 GLIASVGADG------VLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp SCEEEEETTS------CEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred CEEEEEeCCC------EEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 3556666543 58889988888876543221111 11222222 46677777765 678888754
No 94
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=86.95 E-value=21 Score=33.74 Aligned_cols=62 Identities=13% Similarity=0.038 Sum_probs=35.6
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEE-CC----EEEEEecCC-eEEEEECCCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-NG----IFYVYSETE-KLAGYYIERG 443 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~-~g----~lYv~GG~~-~i~~YD~~~~ 443 (557)
.++++|+.++ .+..++........+..++.......+.+.. ++ .+++.|+.+ .|..||+.+.
T Consensus 183 ~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 183 EKLAVSALEQ------AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp CEEEEEETTE------EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred cEEEEecCCC------cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 6777776543 3555666677765554444332222333333 33 677777664 7888888754
No 95
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=86.79 E-value=24 Score=35.18 Aligned_cols=64 Identities=11% Similarity=-0.006 Sum_probs=37.7
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEcc-CCCCCCcCceEEEEECCEEEEEe---cC-CeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQ-RLPVDFGVVSSGVVCNGIFYVYS---ET-EKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~-~lp~~~~~~~~~vv~~g~lYv~G---G~-~~i~~YD~~~~~ 444 (557)
+.+++.|+.+ ..+.+||+.+.+-...- ..............-++.+++.| +. ..+..||+.+..
T Consensus 188 ~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 188 GALICTSCRD------KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp SSCEEEEETT------SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred CCEEEEEecC------CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 3667777644 46899999887643322 11111111223334578877777 33 489999997643
No 96
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=86.22 E-value=23 Score=33.53 Aligned_cols=199 Identities=7% Similarity=-0.121 Sum_probs=96.9
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEE-ECCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~-~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
+..||+++.. ...++.||+.++ ...+.... ..-.+++. -++.||+.... ...+.
T Consensus 39 g~~l~~~~~~-----~~~i~~~~~~~~-~~~~~~~~---~~~~~l~~~~dg~l~v~~~~----------------~~~i~ 93 (296)
T 3e5z_A 39 RSAVIFSDVR-----QNRTWAWSDDGQ-LSPEMHPS---HHQNGHCLNKQGHLIACSHG----------------LRRLE 93 (296)
T ss_dssp GTEEEEEEGG-----GTEEEEEETTSC-EEEEESSC---SSEEEEEECTTCCEEEEETT----------------TTEEE
T ss_pred CCEEEEEeCC-----CCEEEEEECCCC-eEEEECCC---CCcceeeECCCCcEEEEecC----------------CCeEE
Confidence 4457777643 246899999987 55544321 22234444 36788876531 13799
Q ss_pred EEecCCCcEEEcccCCcC-c-ccceEEEEecCCCcccccccCCCCCCCCcEEEE----cccccc--cCC--CCcccceee
Q 035526 269 VFSPLTKSWWKVASMRYA-R-SMPILGISEVSPEFSIIPCHQSHQDRRFPRSRL----GGVSDV--YED--PHRLSLRRQ 338 (557)
Q Consensus 269 ~ydp~t~~W~~l~~m~~~-R-~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~----GG~~~~--y~~--~~~l~~v~~ 338 (557)
+||+.+++.+.+...... . ..+....+..+| .+|+. |..... +.. ......+.+
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G----------------~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~ 157 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDG----------------SLWFSDPTYGIDKPEEGYGGEMELPGRWVFR 157 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTS----------------CEEEEECSHHHHCGGGSSCCCCCSSSCEEEE
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCC----------------CEEEECCccccccccccccccccCCCcEEEE
Confidence 999999888765432111 1 111123333334 67775 331100 000 001234556
Q ss_pred ccccCCcccccCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCC-CCcE-E--EccCCCCCCc
Q 035526 339 YRNSFDGFEGSLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSV-SNKW-M--EIQRLPVDFG 414 (557)
Q Consensus 339 yd~~~~~W~~~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~-t~~W-~--~v~~lp~~~~ 414 (557)
|++. ..............+++.-.+ +++++.+.. ...+.+||+. +++. . .+-.......
T Consensus 158 ~~~~-g~~~~~~~~~~~~~gi~~s~d----------g~~lv~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~p 220 (296)
T 3e5z_A 158 LAPD-GTLSAPIRDRVKPNGLAFLPS----------GNLLVSDTG------DNATHRYCLNARGETEYQGVHFTVEPGKT 220 (296)
T ss_dssp ECTT-SCEEEEECCCSSEEEEEECTT----------SCEEEEETT------TTEEEEEEECSSSCEEEEEEEECCSSSCC
T ss_pred ECCC-CCEEEeecCCCCCccEEECCC----------CCEEEEeCC------CCeEEEEEECCCCcCcCCCeEeeCCCCCC
Confidence 6665 222211111111122222211 355544331 2478889886 4555 2 1111111111
Q ss_pred CceEEEEECCEEEEEecCCeEEEEECCCCcEEec
Q 035526 415 VVSSGVVCNGIFYVYSETEKLAGYYIERGFWIGI 448 (557)
Q Consensus 415 ~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~W~~i 448 (557)
...+.--+|.||+.. .+.|.+||++......+
T Consensus 221 -~~i~~d~~G~l~v~~-~~~v~~~~~~g~~~~~~ 252 (296)
T 3e5z_A 221 -DGLRVDAGGLIWASA-GDGVHVLTPDGDELGRV 252 (296)
T ss_dssp -CSEEEBTTSCEEEEE-TTEEEEECTTSCEEEEE
T ss_pred -CeEEECCCCCEEEEc-CCeEEEECCCCCEEEEE
Confidence 122333578899988 66899999975544333
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=86.11 E-value=29 Score=34.52 Aligned_cols=66 Identities=14% Similarity=0.123 Sum_probs=34.7
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcE-EEccCCCCCCcCceEEEE-E-CCEEEEEec-CCeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKW-MEIQRLPVDFGVVSSGVV-C-NGIFYVYSE-TEKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W-~~v~~lp~~~~~~~~~vv-~-~g~lYv~GG-~~~i~~YD~~~~~ 444 (557)
+++++.|.... .-..+.+||..+..- .....++..... ...+. - +..||+.|+ ...|..||+.++.
T Consensus 232 ~~~l~~g~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 232 GKILTTGFSRM---SERQVALWDTKHLEEPLSLQELDTSSGV-LLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp TEEEEEEECTT---CCEEEEEEETTBCSSCSEEEECCCCSSC-EEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CcEEEEeccCC---CCceEEEEcCccccCCceEEeccCCCce-eEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 37777773211 125789999876431 011112222122 22222 2 345667775 4589999998765
No 98
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=85.92 E-value=22 Score=39.10 Aligned_cols=63 Identities=8% Similarity=-0.052 Sum_probs=34.7
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEE---CCEEEEEecC-CeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC---NGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~---~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
+.++++|+.+ ..+.+||..+..-...-........ ...+.. ++.+++.|+. ..+..||+.++.
T Consensus 153 ~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 153 PSTFASGCLD------RTVKVWSLGQSTPNFTLTTGQERGV-NYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp EEEEEEEETT------SEEEEEETTCSSCSEEEECCCTTCC-CEEEECCSTTCCEEEEECTTSEEEEEETTTTE
T ss_pred CCEEEEEeCC------CeEEEEECCCCcceeEEecCCCCCE-EEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 3777887754 3688999865532211111111111 222222 5666666655 488999987765
No 99
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=85.66 E-value=27 Score=33.83 Aligned_cols=63 Identities=14% Similarity=0.126 Sum_probs=37.7
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCc-CceEEEEECCEEEEEecCC-eEEEEECCCCcE
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFG-VVSSGVVCNGIFYVYSETE-KLAGYYIERGFW 445 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~-~~~~~vv~~g~lYv~GG~~-~i~~YD~~~~~W 445 (557)
+++++.|+.++ .+.+||..+.+-... +..... ..+....-++.+.+.|+.+ .+..||+.+..-
T Consensus 176 g~~lasg~~dg------~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~ 240 (321)
T 3ow8_A 176 GKYLASGAIDG------IINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 240 (321)
T ss_dssp SSEEEEEETTS------CEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCE
T ss_pred CCEEEEEcCCC------eEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcce
Confidence 47778887653 588999988753322 111111 1122233467777777664 799999987654
No 100
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=85.27 E-value=20 Score=39.90 Aligned_cols=59 Identities=7% Similarity=-0.126 Sum_probs=37.8
Q ss_pred eEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCcEEeccC
Q 035526 392 SGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGFWIGIQT 450 (557)
Q Consensus 392 ~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~W~~i~~ 450 (557)
.+.+||+.+++++.....+..........--++.|+|....+.+..||+.++++..+..
T Consensus 194 Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 194 GLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECC
T ss_pred CEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeec
Confidence 47889999999987643322211111122347888886645579999999998887653
No 101
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=84.95 E-value=22 Score=34.97 Aligned_cols=62 Identities=16% Similarity=0.008 Sum_probs=34.3
Q ss_pred EEEEcccCCCCCCCceEEEEeCCCCcEEEccCCC-CC---CcCceEEEE-ECCEEEEEecC----CeEEEEECCCCc
Q 035526 377 LIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLP-VD---FGVVSSGVV-CNGIFYVYSET----EKLAGYYIERGF 444 (557)
Q Consensus 377 iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp-~~---~~~~~~~vv-~~g~lYv~GG~----~~i~~YD~~~~~ 444 (557)
++++|+.+ ..+.+||..+.+-...-... .. .....+.+. -++.+++.|+. ..+..||+.+..
T Consensus 199 ~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 199 LIATGFNN------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE 269 (397)
T ss_dssp EEEEECTT------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred eEEEEeCC------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc
Confidence 66666643 46899999877543322110 01 111122222 25666666655 489999998764
No 102
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=84.56 E-value=30 Score=33.46 Aligned_cols=62 Identities=13% Similarity=0.070 Sum_probs=35.9
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCEEEEEecCC-eEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSETE-KLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~lYv~GG~~-~i~~YD~~~~~ 444 (557)
+++++.|+.++ .+.+||..+..-... +..........+. -++.+.+.|+.+ .+..||+.+.+
T Consensus 218 ~~~l~s~s~dg------~i~iwd~~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 218 SQLLVTASDDG------YIKIYDVQHANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp SCEEEEECTTS------CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCEEEEEcCCC------eEEEEECCCcceeEE--EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence 37778887543 588999887654432 1111111122222 256666666654 79999987654
No 103
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=84.46 E-value=29 Score=34.18 Aligned_cols=63 Identities=6% Similarity=-0.083 Sum_probs=34.4
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEE--CCEEEEEecCC-eEEEEECCCCc
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC--NGIFYVYSETE-KLAGYYIERGF 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~--~g~lYv~GG~~-~i~~YD~~~~~ 444 (557)
.+++.|+.++ .+.+||..+.+-...-..........+.+.. ++.+++.|+.+ .|..||+.+.+
T Consensus 183 ~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~ 248 (344)
T 4gqb_B 183 SVFLSCSEDN------RILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS 248 (344)
T ss_dssp TEEEEEETTS------CEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--
T ss_pred Cceeeecccc------ccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc
Confidence 4777777543 5889999877543321111111111222222 56677777764 78899987654
No 104
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=84.33 E-value=15 Score=35.59 Aligned_cols=70 Identities=16% Similarity=0.146 Sum_probs=37.6
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCC---CcEEE--ccCCCCCCcCceEEEEECCEEEEEecCC-eEEEEECC-CCcEEec
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVS---NKWME--IQRLPVDFGVVSSGVVCNGIFYVYSETE-KLAGYYIE-RGFWIGI 448 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t---~~W~~--v~~lp~~~~~~~~~vv~~g~lYv~GG~~-~i~~YD~~-~~~W~~i 448 (557)
.+++.|+.++ .+.+||..+ +.|.. +.... ......+...++.+.+.|+.+ .+..||.. .+.|..+
T Consensus 229 ~~las~s~D~------~v~iw~~~~~~~~~~~~~~~~~~~--~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~ 300 (316)
T 3bg1_A 229 STIASCSQDG------RVFIWTCDDASSNTWSPKLLHKFN--DVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI 300 (316)
T ss_dssp CEEEEEETTC------EEEEEECSSTTCCCCBCCEEEECS--SCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEE
T ss_pred ceEEEEcCCC------eEEEEEccCccccchhhhhhhcCC--CcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEe
Confidence 5667777543 577888765 33431 11111 111111122356666666654 78888865 5678877
Q ss_pred cCCCC
Q 035526 449 QTSPF 453 (557)
Q Consensus 449 ~~~p~ 453 (557)
..+..
T Consensus 301 ~~~~~ 305 (316)
T 3bg1_A 301 SDVNK 305 (316)
T ss_dssp EECC-
T ss_pred eeccC
Confidence 76554
No 105
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=84.28 E-value=44 Score=36.66 Aligned_cols=68 Identities=16% Similarity=0.225 Sum_probs=43.4
Q ss_pred CCCeEEEEeeecCCcccceEEEeeCCCCc--eEEccCCCcCc-------ceeeEEEEECCEEEEEcccCCCCCCccccCC
Q 035526 189 QNPWLFLFGAVKDGYYSGEIHALDVSQDQ--WHRIDASILKG-------RFMFSVVSIMDDVYVVGGCSSLTSFGRVDGS 259 (557)
Q Consensus 189 ~~~~L~v~GG~~~~~~~~~v~~yd~~~~~--W~~l~~~p~~~-------R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~ 259 (557)
.++.||+... ...++++|..+.+ |+.-...+... ....++++.++.||+...
T Consensus 76 ~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------------- 136 (677)
T 1kb0_A 76 VDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------------- 136 (677)
T ss_dssp ETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------------
T ss_pred ECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------------
Confidence 3777887654 2468999998875 87644322100 112345667889998643
Q ss_pred cccccceEEEEecCCCc--EEE
Q 035526 260 SFKTHKRVLVFSPLTKS--WWK 279 (557)
Q Consensus 260 ~~~~~~~v~~ydp~t~~--W~~ 279 (557)
...++.+|+.|++ |+.
T Consensus 137 ----dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 137 ----DGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp ----TSEEEEEETTTCCEEEEE
T ss_pred ----CCEEEEEECCCCCEEeee
Confidence 1368999998874 775
No 106
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=83.51 E-value=39 Score=33.92 Aligned_cols=63 Identities=5% Similarity=-0.037 Sum_probs=33.7
Q ss_pred CeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEEE
Q 035526 191 PWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLV 269 (557)
Q Consensus 191 ~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ 269 (557)
..+++.|+.+ ..+..||..+.+....-.... ..-.+++.. ++.+++.|+.++ .+.+
T Consensus 120 ~~~l~s~s~D-----g~i~vwd~~~~~~~~~l~~h~--~~V~~v~~~~~~~~l~sgs~D~----------------~i~i 176 (410)
T 1vyh_C 120 FSVMVSASED-----ATIKVWDYETGDFERTLKGHT--DSVQDISFDHSGKLLASCSADM----------------TIKL 176 (410)
T ss_dssp SSEEEEEESS-----SCEEEEETTTCCCCEEECCCS--SCEEEEEECTTSSEEEEEETTS----------------CCCE
T ss_pred CCEEEEEeCC-----CeEEEEECCCCcEEEEEeccC--CcEEEEEEcCCCCEEEEEeCCC----------------eEEE
Confidence 3455666542 358888988776432211111 112233332 567777777554 4667
Q ss_pred EecCCCc
Q 035526 270 FSPLTKS 276 (557)
Q Consensus 270 ydp~t~~ 276 (557)
||..+.+
T Consensus 177 wd~~~~~ 183 (410)
T 1vyh_C 177 WDFQGFE 183 (410)
T ss_dssp EETTSSC
T ss_pred EeCCCCc
Confidence 7876654
No 107
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=83.39 E-value=28 Score=34.21 Aligned_cols=60 Identities=10% Similarity=0.090 Sum_probs=33.1
Q ss_pred EEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEE-EECCEEEEEecC-CeEEEEECCCCc
Q 035526 377 LIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGV-VCNGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 377 iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~v-v~~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
+++.|+.+ ..+.+||..+.+-...-.... ......+ ..++.+++.|+. ..+..||+.+..
T Consensus 302 ~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~--~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 302 KVISCSMD------GSVRLWSLKQNTLLALSIVDG--VPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEEEETT------SEEEEEETTTTEEEEEEECTT--CCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred EEEEEeCC------CcEEEEECCCCcEeEecccCC--ccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 56666643 368999998765333221111 1112222 235666666655 489999986543
No 108
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=83.15 E-value=31 Score=32.54 Aligned_cols=57 Identities=16% Similarity=0.101 Sum_probs=35.4
Q ss_pred ceEEEeeCCCCceEEccCC--CcCcceeeEEEEE-C-CEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEc
Q 035526 206 GEIHALDVSQDQWHRIDAS--ILKGRFMFSVVSI-M-DDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKV 280 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~--p~~~R~~~s~a~~-~-~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l 280 (557)
..+..||+.++++..+... ......-.+++.. + +.|||.... +.+++||+. ++...+
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-----------------~~l~~~d~~-g~~~~~ 106 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-----------------LGLLVVQTD-GTFEEI 106 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-----------------TEEEEEETT-SCEEEC
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-----------------CCEEEEeCC-CCEEEE
Confidence 4689999998888765431 0000122344443 4 688887541 268999998 777766
No 109
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=83.14 E-value=24 Score=41.22 Aligned_cols=62 Identities=11% Similarity=0.177 Sum_probs=35.1
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEE-EEECCEEEEEecCC-eEEEEECCCCcE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSETE-KLAGYYIERGFW 445 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~-vv~~g~lYv~GG~~-~i~~YD~~~~~W 445 (557)
++++.|+.++ .+.+||..+.+ .+..+........+. ...++.+.+.|+.+ .+..||+.++.-
T Consensus 1098 ~~l~s~s~d~------~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1098 TKFSSTSADK------TAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQL 1161 (1249)
T ss_dssp SSCEEECCSS------CCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCC
T ss_pred CEEEEEcCCC------cEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCce
Confidence 6677776543 46778876653 222222221211222 33467777777654 799999987653
No 110
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=83.12 E-value=40 Score=37.39 Aligned_cols=182 Identities=9% Similarity=-0.024 Sum_probs=94.7
Q ss_pred ceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCC
Q 035526 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMR 284 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~ 284 (557)
.-++.||+.++++..+.....+...-.+++.. ++.|++... ..+++||+.+++|.......
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~------------------~Gl~~~~~~~~~~~~~~~~~ 488 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH------------------AGVFVIDLASKKVIHHYDTS 488 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET------------------TEEEEEESSSSSCCEEECTT
T ss_pred CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC------------------CceEEEeCCCCeEEecccCc
Confidence 35778888888887765321111222344443 467776421 36899999999987764322
Q ss_pred c-C-cccceEEEEe-cCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccc-cCCC--CCCCce
Q 035526 285 Y-A-RSMPILGISE-VSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEG-SLLP--NRKSYK 358 (557)
Q Consensus 285 ~-~-R~~~~~~v~~-~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~-~~~~--~r~~~~ 358 (557)
. . ......++.. .+| .+++-.-.. -+.+||+..+.++. .... +.....
T Consensus 489 ~~~~~~~~i~~i~~d~~g----------------~lWigt~~~----------Gl~~~~~~~~~~~~~~~~~~l~~~~i~ 542 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDSEG----------------RFWIGTFGG----------GVGIYTPDMQLVRKFNQYEGFCSNTIN 542 (781)
T ss_dssp TSSCSCSCEEEEEECTTC----------------CEEEEESSS----------CEEEECTTCCEEEEECTTTTCSCSCEE
T ss_pred ccccccceeEEEEEcCCC----------------CEEEEEcCC----------CEEEEeCCCCeEEEccCCCCCCCCeeE
Confidence 1 0 0122223332 222 565532101 13346666655544 1111 111111
Q ss_pred EEEeccchhhhhhccceEEEEEcccCCCCCCCceE-EEEeCCCCcEEEcc---CCCCCCcCceEEEEECCEEEEEecCCe
Q 035526 359 FIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSG-EIYDSVSNKWMEIQ---RLPVDFGVVSSGVVCNGIFYVYSETEK 434 (557)
Q Consensus 359 ~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~v-e~YD~~t~~W~~v~---~lp~~~~~~~~~vv~~g~lYv~GG~~~ 434 (557)
....+ .++.|++... .-+ .+||+.+++++... .+|..... +...--+|.||+.+ .+.
T Consensus 543 ~i~~d---------~~g~lWi~T~--------~Glv~~~d~~~~~~~~~~~~~gl~~~~i~-~i~~d~~g~lW~~t-~~G 603 (781)
T 3v9f_A 543 QIYRS---------SKGQMWLATG--------EGLVCFPSARNFDYQVFQRKEGLPNTHIR-AISEDKNGNIWAST-NTG 603 (781)
T ss_dssp EEEEC---------TTSCEEEEET--------TEEEEESCTTTCCCEEECGGGTCSCCCCC-EEEECSSSCEEEEC-SSC
T ss_pred EEEEC---------CCCCEEEEEC--------CCceEEECCCCCcEEEccccCCCCCceEE-EEEECCCCCEEEEc-CCc
Confidence 11111 1246665432 235 88999988877653 24443322 22122357777765 558
Q ss_pred EEEEECCCCcEEeccC
Q 035526 435 LAGYYIERGFWIGIQT 450 (557)
Q Consensus 435 i~~YD~~~~~W~~i~~ 450 (557)
+.+||+++.++.....
T Consensus 604 l~~~~~~~~~~~~~~~ 619 (781)
T 3v9f_A 604 ISCYITSKKCFYTYDH 619 (781)
T ss_dssp EEEEETTTTEEEEECG
T ss_pred eEEEECCCCceEEecc
Confidence 9999999998877643
No 111
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=83.10 E-value=49 Score=38.57 Aligned_cols=66 Identities=12% Similarity=0.052 Sum_probs=36.8
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCC------------CCcCceEEEEECCEEEEEecCCeEEEEECCCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPV------------DFGVVSSGVVCNGIFYVYSETEKLAGYYIERG 443 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~------------~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~ 443 (557)
.+++.|+.+ ..+.+||..+..-...-..+. .....+.+..-++...+.++.+.+..||+.+.
T Consensus 756 ~~l~s~s~d------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~ 829 (1249)
T 3sfz_A 756 ELLASCSAD------GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTS 829 (1249)
T ss_dssp TEEEEEESS------SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTC
T ss_pred CEEEEEECC------CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCC
Confidence 567777654 358888887664332211100 00111111234666777777789999999887
Q ss_pred cEEe
Q 035526 444 FWIG 447 (557)
Q Consensus 444 ~W~~ 447 (557)
....
T Consensus 830 ~~~~ 833 (1249)
T 3sfz_A 830 GLLA 833 (1249)
T ss_dssp CEEE
T ss_pred Ccee
Confidence 6544
No 112
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=82.97 E-value=33 Score=32.57 Aligned_cols=64 Identities=11% Similarity=0.084 Sum_probs=35.5
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEc-cCCCCCCcCceEE-EEECCEEEEEecCC-eEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEI-QRLPVDFGVVSSG-VVCNGIFYVYSETE-KLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v-~~lp~~~~~~~~~-vv~~g~lYv~GG~~-~i~~YD~~~~~ 444 (557)
++.++.|+.+ ..+.+||..+.+-... ............. ...++.+++.|+.+ .|..||+.+..
T Consensus 204 ~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 204 GKYILAATLD------NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp SSEEEEEETT------TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred CCEEEEEcCC------CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 3666777643 3689999987753322 1111111111111 22356666777654 79999987754
No 113
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=82.94 E-value=33 Score=32.59 Aligned_cols=69 Identities=9% Similarity=0.105 Sum_probs=37.4
Q ss_pred EEEEEcccCCCCCCCceEEEEeCC--CCcEEE---ccCCCCCCc---CceEEEE-EC-CEEEEEec-CCeEEEEECC--C
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSV--SNKWME---IQRLPVDFG---VVSSGVV-CN-GIFYVYSE-TEKLAGYYIE--R 442 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~--t~~W~~---v~~lp~~~~---~~~~~vv-~~-g~lYv~GG-~~~i~~YD~~--~ 442 (557)
.+|+.+.. ...+.+||.. +.+++. +..++.... .....++ -+ ..||+.+. .+.+..||+. +
T Consensus 191 ~l~~~~~~------~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~ 264 (343)
T 1ri6_A 191 YAYCVNEL------NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG 264 (343)
T ss_dssp EEEEEETT------TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred EEEEEeCC------CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCC
Confidence 46666542 2468888884 455433 333333211 1112222 23 46887763 4689999987 5
Q ss_pred CcEEeccC
Q 035526 443 GFWIGIQT 450 (557)
Q Consensus 443 ~~W~~i~~ 450 (557)
+.+..+..
T Consensus 265 ~~~~~~~~ 272 (343)
T 1ri6_A 265 SVLSKEGF 272 (343)
T ss_dssp CCEEEEEE
T ss_pred CceEEeee
Confidence 56666544
No 114
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=82.86 E-value=34 Score=32.78 Aligned_cols=51 Identities=12% Similarity=0.203 Sum_probs=27.8
Q ss_pred eEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCEEEEEecC-CeEEEEECCCCc
Q 035526 392 SGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 392 ~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
.+.+||..+.+=... +..........+. -++.+++.|+. ..+..||++++.
T Consensus 296 ~i~~~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 296 EARFYHKIFEEEIGR--VQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp EEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred eeEEEecCCCcchhh--eecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 688888877642221 1111111122222 36666676665 478889887654
No 115
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=82.20 E-value=35 Score=32.33 Aligned_cols=58 Identities=9% Similarity=-0.015 Sum_probs=32.3
Q ss_pred ceEEEeeCCCCceEEccCCCcCcceeeEEEE-ECC-EEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEE
Q 035526 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMD-DVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWK 279 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~-~~~-~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~ 279 (557)
..+..+|+.+.+....-..+...-....++. -++ .+|+.+... ..+++||+.+.+-..
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~----------------~~v~~~d~~~~~~~~ 70 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS----------------ESLVKIDLVTGETLG 70 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT----------------TEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC----------------CeEEEEECCCCCeEe
Confidence 4688999988765432222210001122333 244 677776522 379999998876543
No 116
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=81.85 E-value=39 Score=32.76 Aligned_cols=62 Identities=10% Similarity=0.083 Sum_probs=36.3
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCEEEEEecCC-eEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSETE-KLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~lYv~GG~~-~i~~YD~~~~~ 444 (557)
+++++.|+.++ .+.+||..+..-... +........+.+. -++.+++.|+.+ .+..||+.++.
T Consensus 196 ~~~l~sg~~d~------~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 196 TRLFVSGACDA------SAKLWDVREGMCRQT--FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp SSEEEEEETTS------CEEEEETTTCSEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCEEEEEeCCC------cEEEEECCCCeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc
Confidence 36788887654 588899887653322 1111111122222 356667777654 79999988764
No 117
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=81.59 E-value=47 Score=36.62 Aligned_cols=67 Identities=15% Similarity=-0.080 Sum_probs=41.2
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEec-CCeEEEEECCCCcEEe
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSE-TEKLAGYYIERGFWIG 447 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG-~~~i~~YD~~~~~W~~ 447 (557)
++||+.-. ....|++||+....-+.+...+.......+.++.++.|||.-. .+.|.++|+.+++-..
T Consensus 552 ~~LY~aD~------~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 552 GRLYWVDS------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp CCEEEEET------TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEE
T ss_pred CEEEEEec------CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceE
Confidence 38998774 2467999998754444443222111111223556889999874 3689999987765433
No 118
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=81.28 E-value=41 Score=32.54 Aligned_cols=68 Identities=16% Similarity=0.101 Sum_probs=36.4
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCC------CcEEEccCCCCC-CcCceEEEEECCEEEEEecC-CeEEEEECCCCcEEe
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVS------NKWMEIQRLPVD-FGVVSSGVVCNGIFYVYSET-EKLAGYYIERGFWIG 447 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t------~~W~~v~~lp~~-~~~~~~~vv~~g~lYv~GG~-~~i~~YD~~~~~W~~ 447 (557)
..++.|+.++ .+.+||..+ ..|..+..++.. .....+.+...+.+++.|+. ..+..||..++.|..
T Consensus 212 ~~l~s~s~D~------~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~ 285 (330)
T 2hes_X 212 FRLCSGSDDS------TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKV 285 (330)
T ss_dssp CEEEEEETTS------CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEE
T ss_pred eEEEEEeCCC------eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEE
Confidence 4566666543 356665533 356655544431 11122223334444555554 488999988887765
Q ss_pred cc
Q 035526 448 IQ 449 (557)
Q Consensus 448 i~ 449 (557)
+.
T Consensus 286 ~~ 287 (330)
T 2hes_X 286 FA 287 (330)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 119
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=81.25 E-value=38 Score=32.15 Aligned_cols=61 Identities=15% Similarity=0.099 Sum_probs=33.6
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEE-CCEEEEEecCCeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-NGIFYVYSETEKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~-~g~lYv~GG~~~i~~YD~~~~~ 444 (557)
+++++.|+.++ .+.+||..+.+-... +..... ....+.. ++.+.+.+....+..||+++..
T Consensus 227 ~~~l~s~s~Dg------~i~iwd~~~~~~~~~--~~~~~~-v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~ 288 (340)
T 4aow_A 227 GSLCASGGKDG------QAMLWDLNEGKHLYT--LDGGDI-INALCFSPNRYWLCAATGPSIKIWDLEGKI 288 (340)
T ss_dssp SSEEEEEETTC------EEEEEETTTTEEEEE--EECSSC-EEEEEECSSSSEEEEEETTEEEEEETTTTE
T ss_pred CCEEEEEeCCC------eEEEEEeccCceeee--ecCCce-EEeeecCCCCceeeccCCCEEEEEECCCCe
Confidence 37778887643 588899876543222 222111 1222333 3444444444588899987665
No 120
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=80.94 E-value=0.38 Score=51.85 Aligned_cols=36 Identities=25% Similarity=0.501 Sum_probs=29.0
Q ss_pred CCCCCCCHHHHHHHHhcCC-ccchhhhhhcccccccc
Q 035526 138 RMHIFLPDDTLEMCLVRFP-LTSLMNARLVCKKWRYL 173 (557)
Q Consensus 138 r~~~~lp~dl~~~il~rLP-~~sl~~~~~vck~W~~l 173 (557)
..+..||+|++..||.+|| ..++.+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4566899999999999999 99999999999999977
No 121
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=80.60 E-value=43 Score=32.44 Aligned_cols=63 Identities=8% Similarity=-0.014 Sum_probs=36.0
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEE-EEECCEEEEEecCC-eEEEEECCCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSETE-KLAGYYIERG 443 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~-vv~~g~lYv~GG~~-~i~~YD~~~~ 443 (557)
+++++.|+.++ .+.+||..+++-...-..+.......+. ...++.+.+.|+.+ .+..||..+.
T Consensus 238 ~~~l~s~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 238 GNAFATGSDDA------TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp SSEEEEEETTS------CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CCEEEEEcCCC------cEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence 36778887553 5889998876533221111111111222 22366777777654 7899998654
No 122
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=80.19 E-value=29 Score=33.90 Aligned_cols=70 Identities=14% Similarity=0.058 Sum_probs=39.9
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCC-cEEEccCCCCCCcCceEEEE-ECCEEEEEecC-CeEEEEECCCCcEEeccC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSN-KWMEIQRLPVDFGVVSSGVV-CNGIFYVYSET-EKLAGYYIERGFWIGIQT 450 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~-~W~~v~~lp~~~~~~~~~vv-~~g~lYv~GG~-~~i~~YD~~~~~W~~i~~ 450 (557)
+++++.|+.++ .+.+||..+. .+..+..+..........+. -++.+.+.|+. ..+..||..++.|..+..
T Consensus 117 ~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~ 189 (345)
T 3fm0_A 117 GNLLATCSRDK------SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCAT 189 (345)
T ss_dssp SSEEEEEETTS------CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred CCEEEEEECCC------eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEE
Confidence 36777887653 5788887654 34333322221111122222 35666666665 478999999888875443
No 123
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=80.14 E-value=51 Score=34.37 Aligned_cols=63 Identities=14% Similarity=0.087 Sum_probs=35.6
Q ss_pred EEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCc---CceEEEE-EC-CEEEEEecC-CeEEEEECCCCcEEe
Q 035526 377 LIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFG---VVSSGVV-CN-GIFYVYSET-EKLAGYYIERGFWIG 447 (557)
Q Consensus 377 iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~---~~~~~vv-~~-g~lYv~GG~-~~i~~YD~~~~~W~~ 447 (557)
+++.|+.+ ..+.+||..+.+-... +..... ...+.+. -+ +.+++.|+. ..+..||+.+.+-..
T Consensus 175 ~l~~~~~d------~~v~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 175 RSMTVGDD------GSVVFYQGPPFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 243 (615)
T ss_dssp EEEEEETT------TEEEEEETTTBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEE
T ss_pred EEEEEeCC------CcEEEEeCCCcceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeE
Confidence 66777643 4688899876543322 222111 2222233 24 566666654 589999998776443
No 124
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=79.92 E-value=49 Score=32.65 Aligned_cols=22 Identities=5% Similarity=-0.031 Sum_probs=16.3
Q ss_pred CCEEEEEecCC-eEEEEECCCCc
Q 035526 423 NGIFYVYSETE-KLAGYYIERGF 444 (557)
Q Consensus 423 ~g~lYv~GG~~-~i~~YD~~~~~ 444 (557)
++.+.+.|+.+ .+..||+.+..
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKE 280 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCC
T ss_pred CCCEEEEEcCCCeEEEEECCCCc
Confidence 56666766654 79999998765
No 125
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=79.84 E-value=44 Score=36.64 Aligned_cols=62 Identities=10% Similarity=-0.070 Sum_probs=35.1
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEE-EEECCEEEEEecC-CeEEEEECCCCcE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSET-EKLAGYYIERGFW 445 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~-vv~~g~lYv~GG~-~~i~~YD~~~~~W 445 (557)
.++++|+.+ ..+.+||..+.+-... +.......... ..-++.+.+.|+. ..+..||+.+..-
T Consensus 199 ~~l~~~~~d------g~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 199 PYMITASDD------LTIKIWDYQTKSCVAT--LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV 262 (814)
T ss_dssp CEEEEECTT------SEEEEEETTTTEEEEE--EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSE
T ss_pred CEEEEEeCC------CEEEEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 677777753 3689999887653222 11111111222 2235556666665 5799999887553
No 126
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=79.13 E-value=42 Score=32.07 Aligned_cols=65 Identities=8% Similarity=-0.037 Sum_probs=36.8
Q ss_pred CeEEEEeeecCCcccceEEEeeCCCCceEE-ccCCCcCcceeeEEEEE--CCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 191 PWLFLFGAVKDGYYSGEIHALDVSQDQWHR-IDASILKGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 191 ~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~-l~~~p~~~R~~~s~a~~--~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
+.+++.|+.+ ..+..||..+.+-.. +.... ..-.+++.. ++.+++.|+.++ .+
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~l~s~~~dg----------------~i 140 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKHYVGHG---NAINELKFHPRDPNLLLSVSKDH----------------AL 140 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEEEESCC---SCEEEEEECSSCTTEEEEEETTS----------------CE
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeeeecCCC---CcEEEEEECCCCCCEEEEEeCCC----------------eE
Confidence 4466666542 368889988765322 22111 112233333 567777777543 58
Q ss_pred EEEecCCCcEEE
Q 035526 268 LVFSPLTKSWWK 279 (557)
Q Consensus 268 ~~ydp~t~~W~~ 279 (557)
.+||..+++-..
T Consensus 141 ~iwd~~~~~~~~ 152 (366)
T 3k26_A 141 RLWNIQTDTLVA 152 (366)
T ss_dssp EEEETTTTEEEE
T ss_pred EEEEeecCeEEE
Confidence 899988775443
No 127
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=78.37 E-value=56 Score=32.40 Aligned_cols=54 Identities=15% Similarity=0.113 Sum_probs=31.9
Q ss_pred ceEEEEeCCCCcEEEccCCCCCCcCceEE-EEECCEEEEEecC-CeEEEEECCCCc
Q 035526 391 DSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 391 ~~ve~YD~~t~~W~~v~~lp~~~~~~~~~-vv~~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
..+.+||..+........++......... ..-++.+.+.|+. ..+..||+.++.
T Consensus 327 g~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 327 NNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp CEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred CcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 46899998887777664433222222222 3335666666665 478899987765
No 128
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=78.17 E-value=52 Score=31.94 Aligned_cols=64 Identities=16% Similarity=-0.075 Sum_probs=39.9
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEec-CCeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSE-TEKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG-~~~i~~YD~~~~~ 444 (557)
++||+... ....++++|+....=+.+...+.........++.++.||+... .+.|.++|+.+++
T Consensus 176 ~~lY~~D~------~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 176 GRLYWVDS------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp TEEEEEET------TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred CEEEEEEC------CCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCc
Confidence 38998864 2457999998754333332221111122234567899999874 4699999986654
No 129
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=77.78 E-value=49 Score=31.46 Aligned_cols=59 Identities=10% Similarity=-0.158 Sum_probs=36.7
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCC-cEEEccCCCCCCcCceEEEEECCEEEEEecCC-eEEEEECCCCc
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSN-KWMEIQRLPVDFGVVSSGVVCNGIFYVYSETE-KLAGYYIERGF 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~-~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~-~i~~YD~~~~~ 444 (557)
.+++.... -..+.+||++-+ .|+.-.+ . ..+.+.+..+|.++|.+..+ .+..+|+++++
T Consensus 137 ~~lv~~~~------~~~v~~~d~~G~~~w~~~~~--~--~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 137 NYLVPLFA------TSEVREIAPNGQLLNSVKLS--G--TPFSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp CEEEEETT------TTEEEEECTTSCEEEEEECS--S--CCCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred CEEEEecC------CCEEEEECCCCCEEEEEECC--C--CccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 66665432 246899998732 4765432 1 11233345578888877654 79999998655
No 130
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=77.67 E-value=50 Score=31.49 Aligned_cols=65 Identities=9% Similarity=0.009 Sum_probs=35.7
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCC-CcEEEccCCCCCCcCceEEEE-ECCEEEEEecC-CeEEEEECCCCcEEe
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVS-NKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSET-EKLAGYYIERGFWIG 447 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t-~~W~~v~~lp~~~~~~~~~vv-~~g~lYv~GG~-~~i~~YD~~~~~W~~ 447 (557)
++.+++|+.+ ..+.+||..+ ..-... +..........+. -++.+++.++. ..+..||+.+..-..
T Consensus 187 ~~~l~~~~~d------g~i~i~d~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 187 GKYIIAGHKD------GKISKYDVSNNYEYVDS--IDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp GCEEEEEETT------SEEEEEETTTTTEEEEE--EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCEEEEEcCC------CEEEEEECCCCcEeEEE--EecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 3677777643 3689999987 332221 1111111122222 25655566554 589999998765443
No 131
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=77.62 E-value=20 Score=34.47 Aligned_cols=58 Identities=10% Similarity=-0.036 Sum_probs=32.5
Q ss_pred ceEEEEeCCCCcEEEc-cCCCCCCcCceEEEEECCEEEEEecC-------CeEEEEECCCCcEEec
Q 035526 391 DSGEIYDSVSNKWMEI-QRLPVDFGVVSSGVVCNGIFYVYSET-------EKLAGYYIERGFWIGI 448 (557)
Q Consensus 391 ~~ve~YD~~t~~W~~v-~~lp~~~~~~~~~vv~~g~lYv~GG~-------~~i~~YD~~~~~W~~i 448 (557)
..+.+||+.++.-+.+ .............+.-+|.+|+.... ..++.||+++++...+
T Consensus 112 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 112 GGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp CEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred ceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 4678888877765532 21111111111122236788887542 4789999887766554
No 132
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=77.30 E-value=85 Score=33.92 Aligned_cols=63 Identities=14% Similarity=0.059 Sum_probs=37.6
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCcE
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGFW 445 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~W 445 (557)
+++++.|+.++ .+.+||..+.+- +..+.......+.+..-++.+.+.+..+.+..||+++..-
T Consensus 573 g~~l~sg~~Dg------~i~iwd~~~~~~--~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 573 GSLCASGGKDG------VVLLWDLAEGKK--LYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSI 635 (694)
T ss_dssp SSEEEEEETTS------BCEEEETTTTEE--EECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEE
T ss_pred CCEEEEEeCCC------eEEEEECCCCce--EEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCC
Confidence 47788887653 578899887753 2223222222222222355566666667899999987653
No 133
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=77.27 E-value=62 Score=32.35 Aligned_cols=57 Identities=16% Similarity=0.163 Sum_probs=36.1
Q ss_pred ceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEE
Q 035526 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWW 278 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~ 278 (557)
+.|+.+|..+++...+-.+......-.+++.. ++..+++|+.++ .+.+||..+++-.
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg----------------~v~iWd~~~~~~~ 182 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA----------------EVQLWDVQQQKRL 182 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS----------------CEEEEETTTTEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC----------------eEEEEEcCCCcEE
Confidence 46899999998876654443321222344443 567777777543 5889998877543
No 134
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=77.24 E-value=50 Score=31.25 Aligned_cols=70 Identities=11% Similarity=0.062 Sum_probs=36.8
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCC--CcEEEccC--CCCCCcCceEEEEECCEEEEEecC-CeEEEEECC-CCcEEecc
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVS--NKWMEIQR--LPVDFGVVSSGVVCNGIFYVYSET-EKLAGYYIE-RGFWIGIQ 449 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t--~~W~~v~~--lp~~~~~~~~~vv~~g~lYv~GG~-~~i~~YD~~-~~~W~~i~ 449 (557)
.+++.|+.++ .+.+||..+ ..|....- ..........+...++.+.+.|+. ..+..|+.. .+.|..+.
T Consensus 220 ~~las~s~D~------~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~~ 293 (297)
T 2pm7_B 220 SYMASVSQDR------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAG 293 (297)
T ss_dssp EEEEEEETTS------CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC-
T ss_pred eEEEEEECCC------cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEecc
Confidence 6777777653 477777665 34653211 111111111112236776676665 478888875 56788776
Q ss_pred CC
Q 035526 450 TS 451 (557)
Q Consensus 450 ~~ 451 (557)
.+
T Consensus 294 ~~ 295 (297)
T 2pm7_B 294 EV 295 (297)
T ss_dssp --
T ss_pred cc
Confidence 54
No 135
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=77.22 E-value=47 Score=30.93 Aligned_cols=59 Identities=17% Similarity=0.166 Sum_probs=33.7
Q ss_pred ceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCcEEeccC
Q 035526 391 DSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGFWIGIQT 450 (557)
Q Consensus 391 ~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~W~~i~~ 450 (557)
..+.+||..+.+-...-..+.... .......++.+.+.+....+..||++++.+.....
T Consensus 246 g~v~iwd~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVITLPAISI-WSVDCMSNGDIIVGSSDNLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp SEEEEECTTTCCEEEEEECSSSCE-EEEEECTTSCEEEEETTSCEEEEESCGGGCCC---
T ss_pred CEEEEEECCCCceeEEEeccCceE-EEEEEccCCCEEEEeCCCcEEEEeCCCCceeehhh
Confidence 468999998886554433232211 12223346665544444589999999888765443
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=76.03 E-value=41 Score=35.68 Aligned_cols=57 Identities=7% Similarity=-0.067 Sum_probs=31.0
Q ss_pred ceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCE-EEEEec-CCeEEEEECCCCcEEe
Q 035526 391 DSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI-FYVYSE-TEKLAGYYIERGFWIG 447 (557)
Q Consensus 391 ~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~-lYv~GG-~~~i~~YD~~~~~W~~ 447 (557)
..+.++|..+.+-..+..++....-+..+..-+++ +|+.+. .+.|..+|+.+++-..
T Consensus 302 g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEE
Confidence 57888888764311111112222222222333555 666654 4699999999886543
No 137
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=75.82 E-value=61 Score=31.49 Aligned_cols=52 Identities=10% Similarity=-0.021 Sum_probs=28.4
Q ss_pred ceEEEEeCCCCcEEEccCCCCCCcCc-eEEEEECCEEEEEecC-CeEEEEECCCCc
Q 035526 391 DSGEIYDSVSNKWMEIQRLPVDFGVV-SSGVVCNGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 391 ~~ve~YD~~t~~W~~v~~lp~~~~~~-~~~vv~~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
..+.+||..+.+-... +....... +....-++.+.+.|+. ..+..||+++.+
T Consensus 314 ~~i~v~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 314 STIAVYTVYSGEQITM--LKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp TEEEEEETTTCCEEEE--ECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred CEEEEEECcCCcceee--eccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 4688999887653322 22111111 2223345666666665 479999987754
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=75.64 E-value=86 Score=33.15 Aligned_cols=61 Identities=11% Similarity=0.084 Sum_probs=38.4
Q ss_pred ceEEEEeCCCCcEEEc---cCCCCCCcCceEEEEE--CCEEEEEec--CCeEEEEECCCC-----cEEeccCCCC
Q 035526 391 DSGEIYDSVSNKWMEI---QRLPVDFGVVSSGVVC--NGIFYVYSE--TEKLAGYYIERG-----FWIGIQTSPF 453 (557)
Q Consensus 391 ~~ve~YD~~t~~W~~v---~~lp~~~~~~~~~vv~--~g~lYv~GG--~~~i~~YD~~~~-----~W~~i~~~p~ 453 (557)
+.+.++|..+++-... ...|.+... ...+. ++.+|+.+. .+.|..+|..+. .|+.+..++.
T Consensus 346 ~~v~v~D~~tg~l~~~i~~g~~ph~g~g--~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~ 418 (543)
T 1nir_A 346 NKVAVIDSKDRRLSALVDVGKTPHPGRG--ANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG 418 (543)
T ss_dssp TEEEEEETTTTEEEEEEECSSSBCCTTC--EEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred CeEEEEECCCCeEEEeeccCCCCCCCCC--cccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc
Confidence 5788899999865443 223443222 22222 478898874 468999998773 2877776654
No 139
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.28 E-value=0.0021 Score=53.93 Aligned_cols=83 Identities=8% Similarity=0.013 Sum_probs=53.4
Q ss_pred cccceeeeee--ecCCCceeeeccCCCcCCCCCcccCCCccccCCCCCCCCCCcccc-------eeeeeeeccceeceee
Q 035526 51 KGVSLKCLTL--YGRGGGCKVGAETGEECGDSSSRRRSSASEEGKGYKPFCGSEEIG-------VGVDCFSYGVKEKFWK 121 (557)
Q Consensus 51 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~e~~~-------~~~~~~~~~~~~~~W~ 121 (557)
+.+.-|||.+ ||...||.-+...-.+|+..++.+ ...++| |+.+..++... ...+.|.. .+.|+
T Consensus 7 ~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~-v~~~~e---Fl~L~~~~L~~lL~sdv~~E~~vf~a---v~~Wv 79 (105)
T 2eqx_A 7 GVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQ-LQNTEE---FLHLPHRLLTDIISDGVPCSQNPTEA---IEAWI 79 (105)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHH-HHTSHH---HHHSCHHHHHHHHHTCEETTSCHHHH---HHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-HHhccc---HhhCCHHHHHHHHcCCCCCHHHHHHH---HHHHH
Confidence 3455699999 889999987777777887766666 333333 43322111100 01223433 34599
Q ss_pred ecCCc--cccccccccccCCC
Q 035526 122 KSNSK--NLELQDSVRNSRMH 140 (557)
Q Consensus 122 ~~~~~--~~~l~~l~~~~r~~ 140 (557)
+||++ .++++++++++|.+
T Consensus 80 ~~d~~~R~~~~~~Ll~~VR~~ 100 (105)
T 2eqx_A 80 NFNKEEREAFAESLRTSLKEI 100 (105)
T ss_dssp HTTHHHHHHHHHHHHHHCCEE
T ss_pred HcCHHHHHHHHHHHHHHHHHh
Confidence 99987 58999999999965
No 140
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=75.21 E-value=64 Score=31.51 Aligned_cols=62 Identities=13% Similarity=0.042 Sum_probs=37.0
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCEEEEEecC-CeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
+.+++.|+.++ .+.+||..+.+....-.... ....+.+. .++.+++.|+. ..+..||+.++.
T Consensus 210 g~~l~sgs~Dg------~v~~wd~~~~~~~~~~~~h~--~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 210 GNTFVSGGCDK------KAMVWDMRSGQCVQAFETHE--SDVNSVRYYPSGDAFASGSDDATCRLYDLRADR 273 (354)
T ss_dssp CCEEEEEETTS------CEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCEEEEEeCCC------eEEEEECCCCcEEEEecCCC--CCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 36778887654 58899998876544321111 11122222 25666666665 478999987764
No 141
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=74.65 E-value=33 Score=33.47 Aligned_cols=54 Identities=11% Similarity=-0.107 Sum_probs=33.2
Q ss_pred ceEEEEeCCCCcEEEccCCCCCCcCceEEEEE-CCEEEEEec-----------------CCeEEEEECCCCcEEec
Q 035526 391 DSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-NGIFYVYSE-----------------TEKLAGYYIERGFWIGI 448 (557)
Q Consensus 391 ~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~-~g~lYv~GG-----------------~~~i~~YD~~~~~W~~i 448 (557)
..+.+||+.+++.+.+..++. . .....- +|+++++++ ...++.+|+.++....+
T Consensus 264 ~~l~~~d~~~g~~~~l~~~~~--~--~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (396)
T 3c5m_A 264 RVIYKANPETLENEEVMVMPP--C--SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKL 335 (396)
T ss_dssp EEEEEECTTTCCEEEEEECCS--E--EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEE
T ss_pred ceEEEEECCCCCeEEeeeCCC--C--CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEc
Confidence 348888988887777655442 1 122334 677666543 24788888877664433
No 142
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=74.64 E-value=32 Score=37.70 Aligned_cols=65 Identities=15% Similarity=0.116 Sum_probs=43.6
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCC--cEEEccCCCCCCc-------CceEEEEECCEEEEEecCCeEEEEECCCCc--
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDFG-------VVSSGVVCNGIFYVYSETEKLAGYYIERGF-- 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~--~W~~v~~lp~~~~-------~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~-- 444 (557)
+||+.... ..+..+|..++ .|+.-...+.... .....++.+++||+......+.++|.++++
T Consensus 68 ~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~ 140 (668)
T 1kv9_A 68 VIYTSMSW-------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAI 140 (668)
T ss_dssp EEEEEEGG-------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEECCC-------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEe
Confidence 88887642 46888998776 4987543322100 011235679999998777799999998765
Q ss_pred EEe
Q 035526 445 WIG 447 (557)
Q Consensus 445 W~~ 447 (557)
|+.
T Consensus 141 W~~ 143 (668)
T 1kv9_A 141 WSQ 143 (668)
T ss_dssp EEE
T ss_pred eee
Confidence 665
No 143
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=74.44 E-value=68 Score=31.41 Aligned_cols=63 Identities=6% Similarity=-0.003 Sum_probs=35.3
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECC-EEEEEecC-CeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNG-IFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g-~lYv~GG~-~~i~~YD~~~~~ 444 (557)
+.+++.|+.+ ..+.+||..+.+-...-..... ........-++ .+++.++. ..+..||+.+..
T Consensus 275 ~~~l~s~~~d------g~v~~wd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 275 EHLLLSSGRD------NTVLLWNPESAEQLSQFPARGN-WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp SSCEEEEESS------SEEEEECSSSCCEEEEEECSSS-CCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCeEEEEeCC------CCEEEeeCCCCccceeecCCCC-ceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 3677777754 3688999887643322111111 11122222344 57777765 488999987654
No 144
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=74.29 E-value=76 Score=31.94 Aligned_cols=188 Identities=9% Similarity=-0.160 Sum_probs=88.9
Q ss_pred ceEEEeeCCCCceEEccCCCcCcceeeEEEE-ECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccCC
Q 035526 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASMR 284 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~-~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m~ 284 (557)
..++.+|.....-..+..... . -.+++. -+++..++++.... ...++++|+.+++...+...+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~--~-v~~~~~Spdg~~la~~s~~~~-------------~~~i~~~d~~tg~~~~l~~~~ 222 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ--P-LMSPAWSPDGSKLAYVTFESG-------------RSALVIQTLANGAVRQVASFP 222 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS--C-EEEEEECTTSSEEEEEECTTS-------------SCEEEEEETTTCCEEEEECCS
T ss_pred ceEEEEcCCCCCCEEEeCCCC--c-ceeeEEcCCCCEEEEEEecCC-------------CcEEEEEECCCCcEEEeecCC
Confidence 678899987665544433211 1 122332 35555555553321 247999999998877665433
Q ss_pred cCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcccccCCCCCCCceEEEecc
Q 035526 285 YARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGFEGSLLPNRKSYKFIRQKS 364 (557)
Q Consensus 285 ~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W~~~~~~~r~~~~~~~~~~ 364 (557)
. ......+.-+| ..+++.+..+ ....+..||..+.....-.... ..........
T Consensus 223 ~---~~~~~~~spdg---------------~~la~~~~~~-------g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~~sp 276 (415)
T 2hqs_A 223 R---HNGAPAFSPDG---------------SKLAFALSKT-------GSLNLYVMDLASGQIRQVTDGR-SNNTEPTWFP 276 (415)
T ss_dssp S---CEEEEEECTTS---------------SEEEEEECTT-------SSCEEEEEETTTCCEEECCCCS-SCEEEEEECT
T ss_pred C---cccCEEEcCCC---------------CEEEEEEecC-------CCceEEEEECCCCCEEeCcCCC-CcccceEECC
Confidence 2 11122233233 1233233211 1234556666555432211111 1111122221
Q ss_pred chhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC----CeEEEEEC
Q 035526 365 DQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET----EKLAGYYI 440 (557)
Q Consensus 365 d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~----~~i~~YD~ 440 (557)
.++.+++++... ....++++|..+++-+.+.... .........-+|+..++++. ..+..+|+
T Consensus 277 ---------dg~~l~~~s~~~---g~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 277 ---------DSQNLAFTSDQA---GRPQVYKVNINGGAPQRITWEG--SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp ---------TSSEEEEEECTT---SSCEEEEEETTSSCCEECCCSS--SEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred ---------CCCEEEEEECCC---CCcEEEEEECCCCCEEEEecCC--CcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 134444443211 1247888999887655443211 11111122235554444332 47999999
Q ss_pred CCCcEEecc
Q 035526 441 ERGFWIGIQ 449 (557)
Q Consensus 441 ~~~~W~~i~ 449 (557)
+++....+.
T Consensus 343 ~~~~~~~l~ 351 (415)
T 2hqs_A 343 ATGGVQVLS 351 (415)
T ss_dssp TTCCEEECC
T ss_pred CCCCEEEec
Confidence 988776554
No 145
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=74.10 E-value=41 Score=33.94 Aligned_cols=61 Identities=7% Similarity=0.014 Sum_probs=33.4
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEE-C-CEEEEEecC-CeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC-N-GIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~-~-g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
+++++.|+.++ .+.+||..... +..+........+.+.. + ..+++.|+. ..|..||+.+..
T Consensus 221 ~~~l~~g~~dg------~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 221 SRMVVTGDNVG------NVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp TTEEEEECSSS------BEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred CCEEEEEeCCC------cEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccc
Confidence 36788887543 58888886542 22222211222222322 3 346666665 478899987654
No 146
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=73.98 E-value=68 Score=31.24 Aligned_cols=60 Identities=5% Similarity=-0.037 Sum_probs=32.2
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCEEEEEec-CCeEEEEECCCCc
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSE-TEKLAGYYIERGF 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~lYv~GG-~~~i~~YD~~~~~ 444 (557)
++++.|+.++ .+.+||..+.+-... +..........+. -++ +++.++ ...+..||+.+..
T Consensus 260 ~~l~~~~~d~------~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 260 KLLLSASDDG------TLRIWHGGNGNSQNC--FYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT 321 (425)
T ss_dssp TEEEEEETTS------CEEEECSSSBSCSEE--ECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE
T ss_pred CEEEEEcCCC------EEEEEECCCCccceE--ecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc
Confidence 5677776443 588888876532221 1111111122233 356 444444 4589999998765
No 147
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=73.65 E-value=81 Score=32.50 Aligned_cols=77 Identities=12% Similarity=-0.096 Sum_probs=41.1
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEE--ECCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVS--IMDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~--~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
...+|+.-...... .+.+..+|+.+.+-.. .++.. ... .++. -+..+||.--...... .....+.+
T Consensus 84 ~~~vyV~n~~~~~~-~~~VsVID~~t~~vv~--~I~vG-~~P-gia~SpDgk~lyVan~~~~~~~-------~G~~~~~V 151 (426)
T 3c75_H 84 ARRVYIQDPAHFAA-ITQQFVIDGSTGRILG--MTDGG-FLP-HPVAAEDGSFFAQASTVFERIA-------RGKRTDYV 151 (426)
T ss_dssp TTEEEEEECTTTCS-SEEEEEEETTTTEEEE--EEEEC-SSC-EEEECTTSSCEEEEEEEEEETT-------EEEEEEEE
T ss_pred CCEEEEECCCcCCC-CCeEEEEECCCCEEEE--EEECC-CCC-ceEECCCCCEEEEEeccccccc-------cCCCCCEE
Confidence 45688876432111 1789999998876432 22222 222 3333 2457888742100000 00123589
Q ss_pred EEEecCCCcEE
Q 035526 268 LVFSPLTKSWW 278 (557)
Q Consensus 268 ~~ydp~t~~W~ 278 (557)
.++|+.|++=.
T Consensus 152 sviD~~t~~vv 162 (426)
T 3c75_H 152 EVFDPVTFLPI 162 (426)
T ss_dssp EEECTTTCCEE
T ss_pred EEEECCCCcEE
Confidence 99999998654
No 148
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=73.48 E-value=58 Score=30.23 Aligned_cols=190 Identities=6% Similarity=-0.153 Sum_probs=96.1
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE--CCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~--~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
++.||+.... ...++.||+....-..+..... ..-++++.. ++.||+.... .+.+
T Consensus 47 ~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~--~~p~~ia~d~~~~~lyv~d~~----------------~~~I 103 (267)
T 1npe_A 47 DKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQDL--GSPEGIALDHLGRTIFWTDSQ----------------LDRI 103 (267)
T ss_dssp TTEEEEEETT-----TTEEEEEESSSCCCEEEECTTC--CCEEEEEEETTTTEEEEEETT----------------TTEE
T ss_pred CCEEEEEECC-----CCEEEEEecCCCCcEEEEECCC--CCccEEEEEecCCeEEEEECC----------------CCEE
Confidence 5678876532 3568999987765433322111 122455554 5799998642 2478
Q ss_pred EEEecCCCcEEEcccCCcCcccceEEEEec-CCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcc
Q 035526 268 LVFSPLTKSWWKVASMRYARSMPILGISEV-SPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGF 346 (557)
Q Consensus 268 ~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~-~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W 346 (557)
.++|+....-+.+.+... ..+...++.- ++ .+|+..... ..+.+.++++....-
T Consensus 104 ~~~~~~g~~~~~~~~~~~--~~P~~i~vd~~~g----------------~lyv~~~~~-------~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 104 EVAKMDGTQRRVLFDTGL--VNPRGIVTDPVRG----------------NLYWTDWNR-------DNPKIETSHMDGTNR 158 (267)
T ss_dssp EEEETTSCSCEEEECSSC--SSEEEEEEETTTT----------------EEEEEECCS-------SSCEEEEEETTSCCC
T ss_pred EEEEcCCCCEEEEEECCC--CCccEEEEeeCCC----------------EEEEEECCC-------CCcEEEEEecCCCCc
Confidence 899886544333322111 1122223332 23 566654210 112344444432211
Q ss_pred cc-cCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEc-cCCCCCCcCceEEEEECC
Q 035526 347 EG-SLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEI-QRLPVDFGVVSSGVVCNG 424 (557)
Q Consensus 347 ~~-~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v-~~lp~~~~~~~~~vv~~g 424 (557)
+. .........+++.-. ..++||+.... .+.+.+||+....=+.+ ..+..+ ...++.++
T Consensus 159 ~~~~~~~~~~P~gia~d~---------~~~~lyv~d~~------~~~I~~~~~~g~~~~~~~~~~~~P----~gi~~d~~ 219 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDA---------FSSQLCWVDAG------THRAECLNPAQPGRRKVLEGLQYP----FAVTSYGK 219 (267)
T ss_dssp EEEECTTCSCEEEEEEET---------TTTEEEEEETT------TTEEEEEETTEEEEEEEEECCCSE----EEEEEETT
T ss_pred EEEEECCCCCCcEEEEcC---------CCCEEEEEECC------CCEEEEEecCCCceEEEecCCCCc----eEEEEeCC
Confidence 11 001111222333321 11388887642 35799999976433222 222222 12345689
Q ss_pred EEEEEec-CCeEEEEECCCCcEE
Q 035526 425 IFYVYSE-TEKLAGYYIERGFWI 446 (557)
Q Consensus 425 ~lYv~GG-~~~i~~YD~~~~~W~ 446 (557)
.|||... .+.|.+||+++++-.
T Consensus 220 ~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 220 NLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEEECCCCeEEEEeCCCCCce
Confidence 9999874 469999999887643
No 149
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=73.43 E-value=33 Score=36.86 Aligned_cols=65 Identities=9% Similarity=0.114 Sum_probs=40.1
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCC--cEEEccCC-CCCCcCceEEEEECCEEEEEec------CCeEEEEECCCCc--
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRL-PVDFGVVSSGVVCNGIFYVYSE------TEKLAGYYIERGF-- 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~--~W~~v~~l-p~~~~~~~~~vv~~g~lYv~GG------~~~i~~YD~~~~~-- 444 (557)
+||+... -..+..+|..++ .|+.-..- +.......+-++.++.+|+..+ ...+.+||+++++
T Consensus 117 ~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 117 QIVKKQA-------NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp EEEEECT-------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred EEEEEeC-------CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 7776542 135888888776 58754221 1111111223567999998764 3589999998765
Q ss_pred EEe
Q 035526 445 WIG 447 (557)
Q Consensus 445 W~~ 447 (557)
|+.
T Consensus 190 W~~ 192 (571)
T 2ad6_A 190 WRA 192 (571)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 150
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=73.39 E-value=54 Score=33.17 Aligned_cols=64 Identities=11% Similarity=0.007 Sum_probs=35.6
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC-CeEEEEECCCCcEE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET-EKLAGYYIERGFWI 446 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~-~~i~~YD~~~~~W~ 446 (557)
++++.|+.+ ..+.+||..+.+-...-..... ....+.++.++.+++.|+. ..|..||+.+++-.
T Consensus 211 ~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~h~-~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 211 QFIITSDRD------EHIKISHYPQCFIVDKWLFGHK-HFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp EEEEEEETT------SCEEEEEESCTTCEEEECCCCS-SCEEEEEECSTTEEEEEESSSEEEEEETTTCCEE
T ss_pred cEEEEEcCC------CcEEEEECCCCceeeeeecCCC-CceEEEEECCCCEEEEEeCCCeEEEEECCCCcEe
Confidence 677777754 3578888876653322110111 1112222226666666665 48999999887643
No 151
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=72.80 E-value=83 Score=31.71 Aligned_cols=55 Identities=16% Similarity=0.087 Sum_probs=33.7
Q ss_pred ceEEEEeC--C-CCcEEEccCCCCCCcCceEEEEECCEEEEEecCC----------eEEEEECCCCcEE
Q 035526 391 DSGEIYDS--V-SNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETE----------KLAGYYIERGFWI 446 (557)
Q Consensus 391 ~~ve~YD~--~-t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~----------~i~~YD~~~~~W~ 446 (557)
..+.+||. . .++++.+..++.. ......+...+.+++..+.. .++.++.+++.|+
T Consensus 330 ~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 330 KCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp SEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred CeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 46888887 3 3556666554443 22234455667788776531 6677778888885
No 152
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=72.40 E-value=86 Score=31.67 Aligned_cols=63 Identities=16% Similarity=-0.061 Sum_probs=39.2
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEec-CCeEEEEECCCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSE-TEKLAGYYIERG 443 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG-~~~i~~YD~~~~ 443 (557)
++||+... ....|+++|+....-+.+...+.......+.++.++.||+... .+.|.++|..++
T Consensus 258 ~~lY~aD~------~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 258 GRLYWVDS------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp TEEEEEET------TTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSC
T ss_pred CEEEEEEC------CCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCC
Confidence 48999864 2468999998754433332211111222234668999999874 458999996554
No 153
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=72.36 E-value=40 Score=37.08 Aligned_cols=65 Identities=18% Similarity=0.179 Sum_probs=43.7
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCC--cEEEccCCCCCC-------cCceEEEEECCEEEEEecCCeEEEEECCCCc--
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDF-------GVVSSGVVCNGIFYVYSETEKLAGYYIERGF-- 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~--~W~~v~~lp~~~-------~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~-- 444 (557)
+||+.... ..+..+|..++ .|+.-...+... ......++.+++||+.+....+.++|.++++
T Consensus 72 ~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~ 144 (689)
T 1yiq_A 72 VMYTTGPF-------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRA 144 (689)
T ss_dssp EEEEECGG-------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEEcCC-------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEe
Confidence 89887642 45889998876 498754332110 0011235679999998777799999998765
Q ss_pred EEe
Q 035526 445 WIG 447 (557)
Q Consensus 445 W~~ 447 (557)
|+.
T Consensus 145 W~~ 147 (689)
T 1yiq_A 145 WSV 147 (689)
T ss_dssp EEE
T ss_pred eee
Confidence 665
No 154
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=72.04 E-value=69 Score=30.42 Aligned_cols=65 Identities=5% Similarity=-0.059 Sum_probs=34.8
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCc--EEEccCCCCC-CcCceEEE-----EECCEEEEEecC-CeEEEEECCCCcEE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNK--WMEIQRLPVD-FGVVSSGV-----VCNGIFYVYSET-EKLAGYYIERGFWI 446 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~--W~~v~~lp~~-~~~~~~~v-----v~~g~lYv~GG~-~~i~~YD~~~~~W~ 446 (557)
.+++.|+.++ .+.+||..+.. ...+...... .....+.+ ..++.+++.|+. ..+..||+.+..-.
T Consensus 130 ~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 130 PEIVTGSRDG------TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR 203 (357)
T ss_dssp CEEEEEETTS------CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE
T ss_pred cEEEEEeCCC------eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee
Confidence 5666666433 57788887654 3333221111 11111112 136666666665 58999999887643
No 155
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=71.74 E-value=48 Score=32.33 Aligned_cols=68 Identities=10% Similarity=0.050 Sum_probs=35.0
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEE-ccCC--C-cCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCccccc
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHR-IDAS--I-LKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTH 264 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~-l~~~--p-~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~ 264 (557)
++ +++.|+. ...+..||..+.+... +... . .....-.+++.. ++.++++|+.++. .
T Consensus 197 ~~-~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~-------------~ 257 (397)
T 1sq9_A 197 RG-LIATGFN-----NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS-------------F 257 (397)
T ss_dssp TS-EEEEECT-----TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT-------------E
T ss_pred Cc-eEEEEeC-----CCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCC-------------C
Confidence 45 5666553 2468899988765432 2210 1 001112233332 5666777764311 1
Q ss_pred ceEEEEecCCCc
Q 035526 265 KRVLVFSPLTKS 276 (557)
Q Consensus 265 ~~v~~ydp~t~~ 276 (557)
..+.+||..+.+
T Consensus 258 g~i~i~d~~~~~ 269 (397)
T 1sq9_A 258 GCITLYETEFGE 269 (397)
T ss_dssp EEEEEEETTTCC
T ss_pred ceEEEEECCCCc
Confidence 378999987654
No 156
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=71.68 E-value=67 Score=30.97 Aligned_cols=61 Identities=11% Similarity=0.157 Sum_probs=35.5
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEE--EccCCCCCCcCceEEEE-ECCEEEEEecCCeEEEEECCCCc
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWM--EIQRLPVDFGVVSSGVV-CNGIFYVYSETEKLAGYYIERGF 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~--~v~~lp~~~~~~~~~vv-~~g~lYv~GG~~~i~~YD~~~~~ 444 (557)
.+++.|+.++ .+.+||..+.+-. .+.. ... ....+.+. -++.+.+.|+.+.+..||+.+..
T Consensus 183 ~~lasg~~dg------~i~iwd~~~~~~~~~~~~~-~h~-~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 183 LLLALYSPDG------ILDVYNLSSPDQASSRFPV-DEE-AKIKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp CEEEEECTTS------CEEEEESSCTTSCCEECCC-CTT-SCEEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred CEEEEEcCCC------EEEEEECCCCCCCccEEec-cCC-CCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 6777777543 5888898876532 2211 011 11122222 36666667777799999998754
No 157
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=71.18 E-value=72 Score=30.27 Aligned_cols=78 Identities=10% Similarity=-0.150 Sum_probs=42.2
Q ss_pred ceeeccccCC-cccccCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCC--cEEEcc-CCC
Q 035526 335 LRRQYRNSFD-GFEGSLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQ-RLP 410 (557)
Q Consensus 335 ~v~~yd~~~~-~W~~~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~--~W~~v~-~lp 410 (557)
.+..||+..+ .|+...+ ...+.+....+ +.+++.+..+ ..+..+|+.++ .|+.-. .++
T Consensus 147 ~v~~~d~~G~~~w~~~~~--~~~~~~~~~~~----------g~~~v~~~~~------~~v~~~d~~tG~~~w~~~~~~~~ 208 (276)
T 3no2_A 147 EVREIAPNGQLLNSVKLS--GTPFSSAFLDN----------GDCLVACGDA------HCFVQLNLESNRIVRRVNANDIE 208 (276)
T ss_dssp EEEEECTTSCEEEEEECS--SCCCEEEECTT----------SCEEEECBTT------SEEEEECTTTCCEEEEEEGGGSB
T ss_pred EEEEECCCCCEEEEEECC--CCccceeEcCC----------CCEEEEeCCC------CeEEEEeCcCCcEEEEecCCCCC
Confidence 4556777622 2443222 22344554432 3788776532 36899999966 477643 223
Q ss_pred CCCcC--ceEEEEECCEEEEEe
Q 035526 411 VDFGV--VSSGVVCNGIFYVYS 430 (557)
Q Consensus 411 ~~~~~--~~~~vv~~g~lYv~G 430 (557)
..+.. .......+|.+||..
T Consensus 209 ~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 209 GVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp SCCCSEEEEEEECTTSCEEEEE
T ss_pred CccccccccceEcCCCCEEEEe
Confidence 21211 122345689999987
No 158
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=70.74 E-value=89 Score=31.19 Aligned_cols=61 Identities=11% Similarity=0.098 Sum_probs=33.0
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEE-EECCEEEEEecCC-eEEEEECCCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGV-VCNGIFYVYSETE-KLAGYYIERG 443 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~v-v~~g~lYv~GG~~-~i~~YD~~~~ 443 (557)
+.+++.|+.+ ..+.+||..+..=. ..+........+.+ ..++.+.+.|+.+ .|..||..+.
T Consensus 308 g~~l~sgs~D------~~i~iwd~~~~~~~--~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 308 GPFLLSGSRD------KTIKMWDVSTGMCL--MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370 (410)
T ss_dssp CCEEEEEETT------SEEEEEETTTTEEE--EEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS
T ss_pred CCEEEEEeCC------CeEEEEECCCCceE--EEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 3677777754 36889998876421 11111111112222 2355656666654 7888988654
No 159
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=70.17 E-value=1.4e+02 Score=33.34 Aligned_cols=63 Identities=16% Similarity=-0.067 Sum_probs=38.8
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC-CeEEEEECCCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET-EKLAGYYIERG 443 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~-~~i~~YD~~~~ 443 (557)
++||+.-. ....|+++|+....=+.+..-........+.++.++.|||.... +.|.++|..++
T Consensus 570 ~~LYwaD~------~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 570 GRLYWVDS------KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp TEEEEEET------TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CeEEEEeC------CCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCC
Confidence 48999864 24679999987543333321111111112346679999999754 68999997554
No 160
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=70.15 E-value=80 Score=30.41 Aligned_cols=197 Identities=13% Similarity=0.094 Sum_probs=99.0
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCC--ceEEccCCC------cCcceeeEEEEE--CCEEEEEcccCCCCCCccccCC
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQD--QWHRIDASI------LKGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDGS 259 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~--~W~~l~~~p------~~~R~~~s~a~~--~~~IYViGG~~~~~~~~~~~~~ 259 (557)
++.||+.... ...+..||+... .-..+.... .....-.+++.. ++.|||..+..
T Consensus 101 ~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~----------- 164 (329)
T 3fvz_A 101 DGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC----------- 164 (329)
T ss_dssp TSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-----------
T ss_pred CCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-----------
Confidence 4457776532 346889998765 223332110 000122455554 68999997521
Q ss_pred cccccceEEEEecCCCcEEEcccCC-------cCcccceEEEEecC-CCcccccccCCCCCCCCcEEEEcccccccCCCC
Q 035526 260 SFKTHKRVLVFSPLTKSWWKVASMR-------YARSMPILGISEVS-PEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPH 331 (557)
Q Consensus 260 ~~~~~~~v~~ydp~t~~W~~l~~m~-------~~R~~~~~~v~~~~-g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~ 331 (557)
...+.+||+....-..+.... .....+....+.-+ + .+|+....+
T Consensus 165 ----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g----------------~l~v~d~~~------- 217 (329)
T 3fvz_A 165 ----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD----------------QLCVADREN------- 217 (329)
T ss_dssp ----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTT----------------EEEEEETTT-------
T ss_pred ----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCC----------------EEEEEECCC-------
Confidence 137899996544333332111 11111222233322 3 677775422
Q ss_pred cccceeeccccCCcccccC--C-CCCCCceEEEeccchhhhhhccceEEEEEcccCCCC-CCCceEEEEeCCCCcEEEc-
Q 035526 332 RLSLRRQYRNSFDGFEGSL--L-PNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWD-EPLDSGEIYDSVSNKWMEI- 406 (557)
Q Consensus 332 ~l~~v~~yd~~~~~W~~~~--~-~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~-~~l~~ve~YD~~t~~W~~v- 406 (557)
+.+.+||+.+.+..... + .......++... +.+|+..|..... .....+.+||+.+++....
T Consensus 218 --~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-----------g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 218 --GRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-----------GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp --TEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-----------TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred --CEEEEEECCCCcEEEEEeccccCCCcceeeecC-----------CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 35667887654443311 1 111122222222 2677777653221 1235799999888876654
Q ss_pred cCCCCCCcCceE-EEEECCEEEEEecC-CeEEEEECCC
Q 035526 407 QRLPVDFGVVSS-GVVCNGIFYVYSET-EKLAGYYIER 442 (557)
Q Consensus 407 ~~lp~~~~~~~~-~vv~~g~lYv~GG~-~~i~~YD~~~ 442 (557)
...+........ ++.-+|.|||.... +.|..|+++.
T Consensus 285 ~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 285 KPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred cCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 211222222122 23346799998754 5899998753
No 161
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=69.85 E-value=46 Score=36.51 Aligned_cols=65 Identities=14% Similarity=0.164 Sum_probs=44.4
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCC--cEEEccCCCCCC-------cCceEEEEECCEEEEEecCCeEEEEECCCCc--
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDF-------GVVSSGVVCNGIFYVYSETEKLAGYYIERGF-- 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~--~W~~v~~lp~~~-------~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~-- 444 (557)
+||+.... ..+..+|..++ .|+.-...+... ......++.+++||+......+.++|.++++
T Consensus 79 ~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 79 IMYVSASW-------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEV 151 (677)
T ss_dssp EEEEECGG-------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEECCC-------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEE
Confidence 88887652 46899998876 498764432110 0112235679999998877799999998765
Q ss_pred EEe
Q 035526 445 WIG 447 (557)
Q Consensus 445 W~~ 447 (557)
|+.
T Consensus 152 W~~ 154 (677)
T 1kb0_A 152 WHQ 154 (677)
T ss_dssp EEE
T ss_pred eee
Confidence 655
No 162
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=69.51 E-value=76 Score=29.90 Aligned_cols=23 Identities=13% Similarity=0.135 Sum_probs=15.2
Q ss_pred ECCEEEEEecCC-eEEEEECCCCc
Q 035526 422 CNGIFYVYSETE-KLAGYYIERGF 444 (557)
Q Consensus 422 ~~g~lYv~GG~~-~i~~YD~~~~~ 444 (557)
.++.+.+.|+.+ .|..||+++++
T Consensus 316 ~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 316 ADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCCEEEEEeCCCEEEEEeCCCcC
Confidence 356666667664 78899988764
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=69.02 E-value=35 Score=32.53 Aligned_cols=62 Identities=13% Similarity=0.006 Sum_probs=33.2
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCC-----CcCceEEEEECC-EEEEEecC------------CeEEE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVD-----FGVVSSGVVCNG-IFYVYSET------------EKLAG 437 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~-----~~~~~~~vv~~g-~lYv~GG~------------~~i~~ 437 (557)
.+|+.+.. -..+.+||+.+++-...-.++.. ......+..-+| .||+.+.. ..+..
T Consensus 56 ~~~v~~~~------~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~ 129 (349)
T 1jmx_B 56 TAYVLNNH------YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEV 129 (349)
T ss_dssp EEEEEETT------TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE
T ss_pred EEEEEeCC------CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEE
Confidence 46666532 24688888888765433222221 011122222244 56666532 68999
Q ss_pred EECCCC
Q 035526 438 YYIERG 443 (557)
Q Consensus 438 YD~~~~ 443 (557)
||++++
T Consensus 130 ~d~~~~ 135 (349)
T 1jmx_B 130 FSTADG 135 (349)
T ss_dssp EEGGGG
T ss_pred EECCCc
Confidence 998874
No 164
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=68.76 E-value=69 Score=35.12 Aligned_cols=58 Identities=19% Similarity=0.233 Sum_probs=36.1
Q ss_pred ceEEEEeCCCC--cEEEccC-CCC-CCcCceEEEEECCEEEEEec------CCeEEEEECCCCc--EEec
Q 035526 391 DSGEIYDSVSN--KWMEIQR-LPV-DFGVVSSGVVCNGIFYVYSE------TEKLAGYYIERGF--WIGI 448 (557)
Q Consensus 391 ~~ve~YD~~t~--~W~~v~~-lp~-~~~~~~~~vv~~g~lYv~GG------~~~i~~YD~~~~~--W~~i 448 (557)
..+..+|..++ .|+.-.. -+. .....++.++.++.+|+-.+ ...+.+||+++++ |+.-
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 131 GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 35788888776 4886542 111 11111223567999998543 2489999998876 8753
No 165
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=67.98 E-value=1.2e+02 Score=31.61 Aligned_cols=58 Identities=16% Similarity=0.243 Sum_probs=36.1
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEc--cCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRI--DASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l--~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
++.+|+|-| +..+.||..+++...- +.+| . --++....+.+|++-| +..
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi~---~-iDAA~~~~g~~YfFkG------------------~~y 208 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG---N-CTSALRWLGRYYCFQG------------------NQF 208 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTTSC---C-CSEEEEETTEEEEEET------------------TEE
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCCCC---c-cchheeeCCceEEEEC------------------CEE
Confidence 345566665 3578999887754321 1222 2 2244445789999987 368
Q ss_pred EEEecCCCc
Q 035526 268 LVFSPLTKS 276 (557)
Q Consensus 268 ~~ydp~t~~ 276 (557)
|+||+.+++
T Consensus 209 ~rfd~~~~~ 217 (460)
T 1qhu_A 209 LRFNPVSGE 217 (460)
T ss_dssp EEECTTTCC
T ss_pred EEEcCccCc
Confidence 899987654
No 166
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=67.95 E-value=57 Score=32.65 Aligned_cols=135 Identities=9% Similarity=-0.041 Sum_probs=63.4
Q ss_pred eEEEEecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCc
Q 035526 266 RVLVFSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDG 345 (557)
Q Consensus 266 ~v~~ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~ 345 (557)
.|++||..|++-.++-.+...........+..+| ..++.|+.+ ..+..||..+.+
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg----------------~~lasgs~D---------g~v~iWd~~~~~ 180 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG----------------NYLAVGTSS---------AEVQLWDVQQQK 180 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS----------------SEEEEEETT---------SCEEEEETTTTE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC----------------CEEEEEECC---------CeEEEEEcCCCc
Confidence 6888888888776554433322221122222233 566777643 245566665543
Q ss_pred ccccCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceE-EEEECC
Q 035526 346 FEGSLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSS-GVVCNG 424 (557)
Q Consensus 346 W~~~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~-~vv~~g 424 (557)
-................++ .+++.|+.+ ..+..+|..+...... .+......... ....++
T Consensus 181 ~~~~~~~h~~~v~~~s~~~-----------~~l~sgs~d------~~i~~~d~~~~~~~~~-~~~~h~~~~~~~~~~~~g 242 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSWNS-----------YILSSGSRS------GHIHHHDVRVAEHHVA-TLSGHSQEVCGLRWAPDG 242 (420)
T ss_dssp EEEEECCCSSCEEEEEEET-----------TEEEEEETT------SEEEEEETTSSSCEEE-EEECCSSCEEEEEECTTS
T ss_pred EEEEEeCCCCceEEEeeCC-----------CEEEEEeCC------CceeEeeecccceeeE-EecccccceeeeeecCCC
Confidence 2221111111122222332 677777754 3567777665433211 11111111111 122345
Q ss_pred EEEEEecC-CeEEEEECCCC
Q 035526 425 IFYVYSET-EKLAGYYIERG 443 (557)
Q Consensus 425 ~lYv~GG~-~~i~~YD~~~~ 443 (557)
...+.++. +.+..+|..++
T Consensus 243 ~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 243 RHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp SEEEEEETTSCEEEEESSCC
T ss_pred CeeeeeeccccceEEeeccc
Confidence 55555554 47778887654
No 167
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=67.94 E-value=83 Score=29.74 Aligned_cols=60 Identities=8% Similarity=0.047 Sum_probs=31.7
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCc--EEEccCCCCCCcCceEEEEE---CCEEEEEecC-CeEEEEECCCCc
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNK--WMEIQRLPVDFGVVSSGVVC---NGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~--W~~v~~lp~~~~~~~~~vv~---~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
.+++.|+.++ .+.+||..+.. .+... ..... ....... ++.+.+.|+. ..|..||+.+..
T Consensus 154 ~~l~sgs~D~------~v~iwd~~~~~~~~~~~~--~~~~~-v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 154 STFASGCLDR------TVKVWSLGQSTPNFTLTT--GQERG-VNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (304)
T ss_dssp TEEEEEETTS------EEEEEETTCSSCSEEEEC--CCTTC-EEEEEECCSTTCCEEEEEETTSEEEEEETTTTE
T ss_pred CEEEEEeCCC------eEEEEECCCCCccceecc--CCcCc-EEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc
Confidence 6777787543 58888876542 11111 11111 1111221 4555566655 488999987754
No 168
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=67.59 E-value=58 Score=30.42 Aligned_cols=23 Identities=9% Similarity=-0.005 Sum_probs=15.0
Q ss_pred ECCEEEEEecC-CeEEEEECCCCc
Q 035526 422 CNGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 422 ~~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
.++.+.+.|+. ..+..||+.++.
T Consensus 160 ~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 160 PDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp TTSSEEEEEETTSCEEEEESSCBT
T ss_pred CCCCEEEEEecCcceeEEECCCCc
Confidence 35555555555 478899987653
No 169
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=67.51 E-value=1.3 Score=47.72 Aligned_cols=33 Identities=24% Similarity=0.466 Sum_probs=30.5
Q ss_pred CCCCHHHHHHHHhcC-Cccchhhhhhcccccccc
Q 035526 141 IFLPDDTLEMCLVRF-PLTSLMNARLVCKKWRYL 173 (557)
Q Consensus 141 ~~lp~dl~~~il~rL-P~~sl~~~~~vck~W~~l 173 (557)
..||+|++..|+.+| |..++.+...|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 469999999999999 899999999999999876
No 170
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=67.40 E-value=74 Score=28.95 Aligned_cols=65 Identities=8% Similarity=0.033 Sum_probs=36.7
Q ss_pred ceEEEeeCCC-CceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEccc
Q 035526 206 GEIHALDVSQ-DQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVAS 282 (557)
Q Consensus 206 ~~v~~yd~~~-~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~ 282 (557)
..++.+|..+ .+...+...+...........-++..+++++.... ....++.+|..++.-..+..
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~------------~~~~l~~~~~~~~~~~~~~~ 127 (297)
T 2ojh_A 62 GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF------------GKSAIYLLPSTGGTPRLMTK 127 (297)
T ss_dssp TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT------------SSCEEEEEETTCCCCEECCS
T ss_pred CeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC------------CcceEEEEECCCCceEEeec
Confidence 3689999998 77766654332111111222235555555553221 23579999988877665543
No 171
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=66.84 E-value=89 Score=29.64 Aligned_cols=60 Identities=18% Similarity=0.225 Sum_probs=37.0
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERG 443 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~ 443 (557)
+.+++.|+.+ ..+.+||..+.+-...-..+. . ..+.....+.+++.+....+..||....
T Consensus 141 ~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 200 (368)
T 3mmy_A 141 YSCVMTGSWD------KTLKFWDTRSSNPMMVLQLPE--R-CYCADVIYPMAVVATAERGLIVYQLENQ 200 (368)
T ss_dssp CEEEEEEETT------SEEEEECSSCSSCSEEEECSS--C-EEEEEEETTEEEEEEGGGCEEEEECSSS
T ss_pred CCEEEEccCC------CcEEEEECCCCcEEEEEecCC--C-ceEEEecCCeeEEEeCCCcEEEEEeccc
Confidence 4777777754 358899987764221111121 1 1233555777777777778999998765
No 172
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=66.23 E-value=94 Score=29.73 Aligned_cols=59 Identities=8% Similarity=0.053 Sum_probs=35.6
Q ss_pred ceEEEeeCCCCceEEccCCCc-----------------CcceeeEEEEE--CCEEEEEcccCCCCCCccccCCcccccce
Q 035526 206 GEIHALDVSQDQWHRIDASIL-----------------KGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDGSSFKTHKR 266 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~p~-----------------~~R~~~s~a~~--~~~IYViGG~~~~~~~~~~~~~~~~~~~~ 266 (557)
..++.||+.+.++..+..... ....-++++.. ++.|||.... ..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~-----------------~~ 102 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY-----------------YH 102 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT-----------------TE
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC-----------------CC
Confidence 468899998877665431100 00123556665 5789987431 24
Q ss_pred EEEEecCCCcEEEcc
Q 035526 267 VLVFSPLTKSWWKVA 281 (557)
Q Consensus 267 v~~ydp~t~~W~~l~ 281 (557)
+.+||+.++..+.+.
T Consensus 103 i~~~d~~~g~~~~~~ 117 (322)
T 2fp8_A 103 LSVVGSEGGHATQLA 117 (322)
T ss_dssp EEEECTTCEECEEEE
T ss_pred EEEEeCCCCEEEEec
Confidence 888998877665554
No 173
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=65.50 E-value=64 Score=34.50 Aligned_cols=66 Identities=9% Similarity=0.055 Sum_probs=44.0
Q ss_pred EEEEEcccCCCCCCCceEEEEeC-CCC--cEEEccCCCCCC-------cCceEEEEECCEEEEEecCCeEEEEECCCCc-
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDS-VSN--KWMEIQRLPVDF-------GVVSSGVVCNGIFYVYSETEKLAGYYIERGF- 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~-~t~--~W~~v~~lp~~~-------~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~- 444 (557)
+||+.... ...+..+|. .++ .|+.-...+... ......++.+++||+......+.++|.++++
T Consensus 64 ~vyv~~~~------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~ 137 (571)
T 2ad6_A 64 MMYVHSAF------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKI 137 (571)
T ss_dssp EEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCE
T ss_pred EEEEEeCC------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCE
Confidence 89987652 236899998 766 598754322110 0011235679999998877799999998764
Q ss_pred -EEe
Q 035526 445 -WIG 447 (557)
Q Consensus 445 -W~~ 447 (557)
|+.
T Consensus 138 ~W~~ 141 (571)
T 2ad6_A 138 NWEV 141 (571)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 654
No 174
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=65.36 E-value=89 Score=29.12 Aligned_cols=63 Identities=14% Similarity=0.158 Sum_probs=32.4
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCC-------cEEEccCCCCCCcCceEEEEE-C--CEEEEEecC-CeEEEEECCCCc
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSN-------KWMEIQRLPVDFGVVSSGVVC-N--GIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~-------~W~~v~~lp~~~~~~~~~vv~-~--g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
.+++.|+.++ .+.+||..+. .|..+..+........+.+.. + +.+.+.|+. ..+..||+.+..
T Consensus 72 ~~l~s~~~dg------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 72 RIIASASYDK------TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp SEEEEEETTS------CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred CEEEEEcCCC------eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 5566666433 4666666553 344443332222222222332 2 555555554 589999987654
No 175
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=64.81 E-value=1.2e+02 Score=32.32 Aligned_cols=56 Identities=11% Similarity=0.049 Sum_probs=35.2
Q ss_pred ceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCE-EEEEe-cCCeEEEEECCCCcEE
Q 035526 391 DSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI-FYVYS-ETEKLAGYYIERGFWI 446 (557)
Q Consensus 391 ~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~-lYv~G-G~~~i~~YD~~~~~W~ 446 (557)
..+.+.|........+..++..+..+..+...+++ +|+.. +.+.|.++|.++++=.
T Consensus 320 g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~ 377 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV 377 (567)
T ss_dssp TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEE
Confidence 56788888776665555554444444433344554 55544 4579999999988633
No 176
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=64.71 E-value=54 Score=31.80 Aligned_cols=65 Identities=5% Similarity=-0.077 Sum_probs=34.5
Q ss_pred EEEEEcccCCCCCCCceEE--EEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEec-CCeEEEEECCCC
Q 035526 376 VLIAVGGLGSWDEPLDSGE--IYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSE-TEKLAGYYIERG 443 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve--~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG-~~~i~~YD~~~~ 443 (557)
.||+.+..+. ....+. .+|..+++.+.+...+.........+.-++.||+.+. ...+..||+.++
T Consensus 63 ~l~~~~~~~~---~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~ 130 (361)
T 3scy_A 63 FVYSVNEFSK---DQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQD 130 (361)
T ss_dssp EEEEEECCSS---TTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTT
T ss_pred EEEEEEccCC---CCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCC
Confidence 4666554321 113444 4455557777776544322222333343445777664 358999998643
No 177
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=64.59 E-value=97 Score=29.31 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=35.9
Q ss_pred CeEEEEeeecCCcccceEEEeeCCCCc--eEEccCCCcC-cceeeEEE-----EECCEEEEEcccCCCCCCccccCCccc
Q 035526 191 PWLFLFGAVKDGYYSGEIHALDVSQDQ--WHRIDASILK-GRFMFSVV-----SIMDDVYVVGGCSSLTSFGRVDGSSFK 262 (557)
Q Consensus 191 ~~L~v~GG~~~~~~~~~v~~yd~~~~~--W~~l~~~p~~-~R~~~s~a-----~~~~~IYViGG~~~~~~~~~~~~~~~~ 262 (557)
+.+++.|+.+ ..+..||..+.. ...+...... .+.-.+++ ..++.+++.|+.+
T Consensus 129 ~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-------------- 189 (357)
T 3i2n_A 129 APEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-------------- 189 (357)
T ss_dssp CCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT--------------
T ss_pred ccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC--------------
Confidence 3355555532 358888888764 3344332211 11222333 1456777777643
Q ss_pred ccceEEEEecCCCcEE
Q 035526 263 THKRVLVFSPLTKSWW 278 (557)
Q Consensus 263 ~~~~v~~ydp~t~~W~ 278 (557)
..+.+||..+.+-.
T Consensus 190 --~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 190 --GDIKLFDLRNMALR 203 (357)
T ss_dssp --SEEEEEETTTTEEE
T ss_pred --CeEEEEECccCcee
Confidence 26889998877643
No 178
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=64.44 E-value=1e+02 Score=29.49 Aligned_cols=51 Identities=16% Similarity=0.160 Sum_probs=27.5
Q ss_pred eEEEEeCCCCcEEEccCCCCC--CcCceEEEEECCEEEEEec-CCeEEEEECCCC
Q 035526 392 SGEIYDSVSNKWMEIQRLPVD--FGVVSSGVVCNGIFYVYSE-TEKLAGYYIERG 443 (557)
Q Consensus 392 ~ve~YD~~t~~W~~v~~lp~~--~~~~~~~vv~~g~lYv~GG-~~~i~~YD~~~~ 443 (557)
.+.+||+....-..+. .|.. ......++..++.|||.+. .+.|.+|++..+
T Consensus 261 ~v~~~d~~G~~~~~~~-~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 261 KGIKFDEFGNILEVIP-LPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEEEECTTSCEEEEEE-CCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC---
T ss_pred EEEEECCCCCEEEEEE-CCCCCccccceEEEEeCCEEEEeecCCCceEEEecccc
Confidence 4666766543333332 2211 1222334557899999874 358999998644
No 179
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=64.38 E-value=92 Score=33.96 Aligned_cols=65 Identities=12% Similarity=0.138 Sum_probs=40.3
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCC--cEEEccCCCC-CCcCceEEEEECCEEEEEecC------CeEEEEECCCCc--
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPV-DFGVVSSGVVCNGIFYVYSET------EKLAGYYIERGF-- 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~--~W~~v~~lp~-~~~~~~~~vv~~g~lYv~GG~------~~i~~YD~~~~~-- 444 (557)
+||+... -..+..+|..++ .|+.-..-+. ......+.++.++.+|+..+. ..+.+||+++++
T Consensus 119 ~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 119 KVYVGTL-------DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp EEEEECT-------TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred EEEEEcC-------CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 6776532 136888898776 4886532111 111112235679999986432 489999998765
Q ss_pred EEe
Q 035526 445 WIG 447 (557)
Q Consensus 445 W~~ 447 (557)
|+.
T Consensus 192 W~~ 194 (668)
T 1kv9_A 192 WRF 194 (668)
T ss_dssp EEE
T ss_pred EEe
Confidence 876
No 180
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=63.61 E-value=1e+02 Score=29.30 Aligned_cols=64 Identities=8% Similarity=-0.099 Sum_probs=38.9
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEe-cCCeEEEEECCCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYS-ETEKLAGYYIERG 443 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~G-G~~~i~~YD~~~~ 443 (557)
++|+...... ...+..||+.+++.+.+..++..+.....+...++.+|+.. +...++++|+.+.
T Consensus 84 ~l~vad~~~~----~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 84 DLVATGWNAD----SIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp CEEEEEECTT----SCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred cEEEEeccCC----cceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 6666553211 12477788888887776655443332222233467788876 3568999999864
No 181
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=63.44 E-value=1.2e+02 Score=33.15 Aligned_cols=57 Identities=7% Similarity=-0.160 Sum_probs=33.0
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-ECCEEEEEecCCeEEEEECCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CNGIFYVYSETEKLAGYYIER 442 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~g~lYv~GG~~~i~~YD~~~ 442 (557)
+.|++... .-+.+|||.+.+.+... +|..... .+... -+|.|| +||.+.+..|||+.
T Consensus 569 g~lWi~t~--------~Gl~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~G~l~-fG~~~Gl~~f~p~~ 626 (758)
T 3ott_A 569 NSIWVSTT--------NGLWIIDRKTMDARQQN-MTNKRFT-SLLFDPKEDCVY-LGGADGFGISHSNL 626 (758)
T ss_dssp TEEEEEES--------SCEEEEETTTCCEEEC---CCCCCS-EEEEETTTTEEE-EECBSEEEEEEC--
T ss_pred CCEEEECC--------CCeEEEcCCCceeEEec-CCCCcee-eeEEECCCCcEE-EecCCceEEEChhh
Confidence 47766542 24788999998876543 3332222 22222 267766 56677999999975
No 182
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=62.73 E-value=1.5e+02 Score=30.73 Aligned_cols=59 Identities=17% Similarity=0.047 Sum_probs=34.2
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCC--cEEEccCCCCCCcCceEEEEECCEEEEEecC-CeEEEEECCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDFGVVSSGVVCNGIFYVYSET-EKLAGYYIER 442 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~--~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~-~~i~~YD~~~ 442 (557)
+++++.|+.++ .+.+||..+. .-..+... ..........-++. .+.++. ..+..||+++
T Consensus 553 ~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~h--~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 553 EDLVATGSLDT------NIFIYSVKRPMKIIKALNAH--KDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp CCEEEEEETTS------CEEEEESSCTTCCEEETTSS--TTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred CCEEEEEcCCC------cEEEEECCCCceechhhhcC--ccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 47888887553 5899999875 23332211 11111233456788 555655 4788888765
No 183
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=62.63 E-value=1.3e+02 Score=30.07 Aligned_cols=188 Identities=9% Similarity=-0.118 Sum_probs=93.7
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLV 269 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ 269 (557)
++.||+.-.. ...++.+++.......+.........+.++-..++.||+.-.. .+.+++
T Consensus 127 ~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~----------------~~~I~~ 185 (386)
T 3v65_B 127 RELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG----------------TSRIEV 185 (386)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETT----------------TTEEEE
T ss_pred CCeEEEEeCC-----CCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCC----------------CCeEEE
Confidence 5677776422 3568899988876655433211111222332247899998542 236888
Q ss_pred EecCCCcEEEcc--cCCcCcccceEEEEe-cCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcc
Q 035526 270 FSPLTKSWWKVA--SMRYARSMPILGISE-VSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGF 346 (557)
Q Consensus 270 ydp~t~~W~~l~--~m~~~R~~~~~~v~~-~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W 346 (557)
+++....-+.+. .+..| ...+++ .++ .+|+.-- .....++++++....-
T Consensus 186 ~~~dg~~~~~l~~~~l~~P----~giavdp~~g----------------~ly~td~--------~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 186 ANLDGAHRKVLLWQSLEKP----RAIALHPMEG----------------TIYWTDW--------GNTPRIEASSMDGSGR 237 (386)
T ss_dssp CBTTSCSCEEEECSSCSCE----EEEEEETTTT----------------EEEEEEC--------SSSCEEEEEETTSCSC
T ss_pred EeCCCCceEEeecCCCCCC----cEEEEEcCCC----------------eEEEecc--------CCCCEEEEEeCCCCCc
Confidence 887655433332 22222 122232 222 4554421 1123455555543221
Q ss_pred cccC-CCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCE
Q 035526 347 EGSL-LPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI 425 (557)
Q Consensus 347 ~~~~-~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~ 425 (557)
+... .......++++-. ..++||+.-. ....|+++|+....=+.+.... .......++.++.
T Consensus 238 ~~~~~~~~~~PnGlavd~---------~~~~lY~aD~------~~~~I~~~d~dG~~~~~~~~~~--~~~P~giav~~~~ 300 (386)
T 3v65_B 238 RIIADTHLFWPNGLTIDY---------AGRRMYWVDA------KHHVIERANLDGSHRKAVISQG--LPHPFAITVFEDS 300 (386)
T ss_dssp EEEECSSCSCEEEEEEEG---------GGTEEEEEET------TTTEEEEECTTSCSCEEEECSS--CSSEEEEEEETTE
T ss_pred EEEEECCCCCeeeEEEeC---------CCCEEEEEEC------CCCEEEEEeCCCCeeEEEEECC--CCCceEEEEECCE
Confidence 1100 0011122333320 1248999864 2467999998754323232111 1112234557999
Q ss_pred EEEEec-CCeEEEEECCCC
Q 035526 426 FYVYSE-TEKLAGYYIERG 443 (557)
Q Consensus 426 lYv~GG-~~~i~~YD~~~~ 443 (557)
||+... .+.|.++|..++
T Consensus 301 ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 301 LYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp EEEEETTTTEEEEEETTTC
T ss_pred EEEeeCCCCeEEEEECCCC
Confidence 999874 468999996444
No 184
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=62.37 E-value=59 Score=32.74 Aligned_cols=61 Identities=10% Similarity=0.029 Sum_probs=32.6
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCc-EEEccCCCCCCcCceEEEEE-CC-EEEEEecC-CeEEEEECCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNK-WMEIQRLPVDFGVVSSGVVC-NG-IFYVYSET-EKLAGYYIER 442 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~-W~~v~~lp~~~~~~~~~vv~-~g-~lYv~GG~-~~i~~YD~~~ 442 (557)
.+++.|+.+ ..+.+||..+.. ...+..+........+.+.. ++ .+++.|+. ..|..||+.+
T Consensus 245 ~~l~s~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 245 SLFGSVADD------QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp TEEEEEETT------SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CEEEEEeCC------CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 677777643 468999988652 11111111111111222222 23 47777776 4899999876
No 185
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=62.20 E-value=1.2e+02 Score=29.50 Aligned_cols=62 Identities=13% Similarity=0.079 Sum_probs=33.6
Q ss_pred eEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEEEE
Q 035526 192 WLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVF 270 (557)
Q Consensus 192 ~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~y 270 (557)
.+++.|+.+ ..+..||..+.+....-.... ..-.+++.. ++.+++.|+.++ .+.+|
T Consensus 211 ~~l~sgs~D-----g~v~~wd~~~~~~~~~~~~h~--~~v~~v~~~p~~~~l~s~s~D~----------------~v~lw 267 (354)
T 2pbi_B 211 NTFVSGGCD-----KKAMVWDMRSGQCVQAFETHE--SDVNSVRYYPSGDAFASGSDDA----------------TCRLY 267 (354)
T ss_dssp CEEEEEETT-----SCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEETTS----------------CEEEE
T ss_pred CEEEEEeCC-----CeEEEEECCCCcEEEEecCCC--CCeEEEEEeCCCCEEEEEeCCC----------------eEEEE
Confidence 455566542 358888988876533211111 111233332 466777777543 57888
Q ss_pred ecCCCc
Q 035526 271 SPLTKS 276 (557)
Q Consensus 271 dp~t~~ 276 (557)
|..+.+
T Consensus 268 d~~~~~ 273 (354)
T 2pbi_B 268 DLRADR 273 (354)
T ss_dssp ETTTTE
T ss_pred ECCCCc
Confidence 876653
No 186
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=61.16 E-value=1.3e+02 Score=29.63 Aligned_cols=62 Identities=19% Similarity=0.171 Sum_probs=30.3
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCC----CC-CcCceEEEE-ECCEEEEEecCC-eEEEEECCCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLP----VD-FGVVSSGVV-CNGIFYVYSETE-KLAGYYIERG 443 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp----~~-~~~~~~~vv-~~g~lYv~GG~~-~i~~YD~~~~ 443 (557)
++++.|+.++ .+.+||..+..-...-..+ .. .....+.+. -++.+.+.|+.+ .+..||+.+.
T Consensus 220 ~~l~~~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 220 KYIAAGSLDR------AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp CEEEEEETTS------CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred CEEEEEcCCC------cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 5666666543 4777887776533221100 00 111112222 356666666654 7888998654
No 187
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=60.97 E-value=1.2e+02 Score=29.26 Aligned_cols=62 Identities=6% Similarity=-0.175 Sum_probs=34.8
Q ss_pred CceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCE-EEEEec---CC--eEEEEECCCCcEEeccCC
Q 035526 390 LDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI-FYVYSE---TE--KLAGYYIERGFWIGIQTS 451 (557)
Q Consensus 390 l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~-lYv~GG---~~--~i~~YD~~~~~W~~i~~~ 451 (557)
...++.+|..+...+.+...+...........-+|+ |++.+. .. .++.+|++++.-+.+..+
T Consensus 215 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~ 282 (388)
T 3pe7_A 215 DARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSM 282 (388)
T ss_dssp SCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEE
T ss_pred cceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcC
Confidence 468999999887776665432111111111223554 544332 22 399999998876665443
No 188
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=59.39 E-value=1.4e+02 Score=29.29 Aligned_cols=60 Identities=3% Similarity=-0.119 Sum_probs=36.1
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCC-CcCceEE-EEECCEEEEEecCC-eEEEEECCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVD-FGVVSSG-VVCNGIFYVYSETE-KLAGYYIER 442 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~-~~~~~~~-vv~~g~lYv~GG~~-~i~~YD~~~ 442 (557)
+++++.|+.++ .|.+||..+.+= +..+... .....++ ..-++++.+.|+.+ .|..+|+..
T Consensus 281 g~~lasgs~D~------~V~iwd~~~~~~--~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 281 GELAVLASNDN------SIALVKLKDLSM--SKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp SCEEEEEETTS------CEEEEETTTTEE--EEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCceEEEcCCC------EEEEEECCCCcE--EEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 58888888653 589999987653 2221111 1111222 23478877777764 888888743
No 189
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=58.72 E-value=71 Score=29.83 Aligned_cols=21 Identities=10% Similarity=0.183 Sum_probs=17.7
Q ss_pred ECCEEEEEecCCeEEEEECCCC
Q 035526 422 CNGIFYVYSETEKLAGYYIERG 443 (557)
Q Consensus 422 ~~g~lYv~GG~~~i~~YD~~~~ 443 (557)
.++++|++-|. .-++||..++
T Consensus 182 ~~g~~YfFkg~-~Ywr~d~~~~ 202 (227)
T 3lp9_A 182 KTNEVYFFKDD-HYARVKVTPX 202 (227)
T ss_dssp STTEEEEEETT-EEEEEECCSS
T ss_pred CCceEEEEECC-EEEEEECCcc
Confidence 36899999985 8899998776
No 190
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=58.31 E-value=72 Score=34.47 Aligned_cols=57 Identities=12% Similarity=0.147 Sum_probs=34.9
Q ss_pred eEEEEeCCCCc--EEEccCCCC-CCcCceEEEEECCEEEEEec------CCeEEEEECCCCc--EEec
Q 035526 392 SGEIYDSVSNK--WMEIQRLPV-DFGVVSSGVVCNGIFYVYSE------TEKLAGYYIERGF--WIGI 448 (557)
Q Consensus 392 ~ve~YD~~t~~--W~~v~~lp~-~~~~~~~~vv~~g~lYv~GG------~~~i~~YD~~~~~--W~~i 448 (557)
.+..+|..+++ |+.-..-+. ......+-++.++.+|+-++ ...|.+||+++++ |+.-
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 132 NVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 57778877764 875422111 11111223567999988653 3589999998765 8753
No 191
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=57.74 E-value=1.3e+02 Score=28.37 Aligned_cols=58 Identities=12% Similarity=0.067 Sum_probs=32.4
Q ss_pred ceEEEeeCCCCc----eEEccCCCcCcceeeEEEE-ECCE-EEEEcccCCCCCCccccCCcccccceEEEEec-CCCcEE
Q 035526 206 GEIHALDVSQDQ----WHRIDASILKGRFMFSVVS-IMDD-VYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSP-LTKSWW 278 (557)
Q Consensus 206 ~~v~~yd~~~~~----W~~l~~~p~~~R~~~s~a~-~~~~-IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp-~t~~W~ 278 (557)
..+..||..+.. ...+... . ..-.+++. -++. +++.|+.++ .+.+||. .+++-.
T Consensus 33 ~~v~iw~~~~~~~~~~~~~~~~~--~-~~v~~~~~~~~~~~~l~~~~~dg----------------~i~~wd~~~~~~~~ 93 (342)
T 1yfq_A 33 GSLTVYKFDIQAKNVDLLQSLRY--K-HPLLCCNFIDNTDLQIYVGTVQG----------------EILKVDLIGSPSFQ 93 (342)
T ss_dssp SEEEEEEEETTTTEEEEEEEEEC--S-SCEEEEEEEESSSEEEEEEETTS----------------CEEEECSSSSSSEE
T ss_pred CeEEEEEeCCCCccccceeeeec--C-CceEEEEECCCCCcEEEEEcCCC----------------eEEEEEeccCCceE
Confidence 357777776655 3222211 1 12223333 3566 667776443 6889998 888765
Q ss_pred Eccc
Q 035526 279 KVAS 282 (557)
Q Consensus 279 ~l~~ 282 (557)
.+..
T Consensus 94 ~~~~ 97 (342)
T 1yfq_A 94 ALTN 97 (342)
T ss_dssp ECBS
T ss_pred eccc
Confidence 5543
No 192
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=57.42 E-value=2e+02 Score=30.50 Aligned_cols=67 Identities=12% Similarity=-0.011 Sum_probs=39.8
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEE-EEECCEEEEEec-CC---eEEEEECCCCcEEeccC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSE-TE---KLAGYYIERGFWIGIQT 450 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~-vv~~g~lYv~GG-~~---~i~~YD~~~~~W~~i~~ 450 (557)
++++.+.. + ...++.+|..+++.+.+..- . ...... ..-++.+++..+ .+ .++.+|+.+++...+..
T Consensus 306 ~~~~~~~~-~----~~~l~~~d~~~~~~~~l~~~-~--~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~ 377 (662)
T 3azo_A 306 LIAVVHGK-G----AAVLGILDPESGELVDAAGP-W--TEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGA 377 (662)
T ss_dssp CEEEEEBS-S----SCEEEEEETTTTEEEECCSS-C--CEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEES
T ss_pred EEEEEEEc-C----ccEEEEEECCCCcEEEecCC-C--CeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeec
Confidence 56666554 2 24677779888877766431 1 111222 344666665543 32 78888998888777643
No 193
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=57.28 E-value=51 Score=32.91 Aligned_cols=130 Identities=8% Similarity=-0.016 Sum_probs=69.1
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCC---cEEEccCCCCCCcCceEEEEE--CCEEEEEecCCeEEEEECCCCcE--Ee
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSN---KWMEIQRLPVDFGVVSSGVVC--NGIFYVYSETEKLAGYYIERGFW--IG 447 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~---~W~~v~~lp~~~~~~~~~vv~--~g~lYv~GG~~~i~~YD~~~~~W--~~ 447 (557)
|.+||.+.+.. ..+.+++|... .|-.-.+.+..+.+....++. +..|++......+.+||+.+-.. ..
T Consensus 148 GnaYVt~s~~~-----~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~ 222 (334)
T 2p9w_A 148 GNSYVAFALGM-----PAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP 222 (334)
T ss_dssp SCEEEEEEESS-----CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE
T ss_pred CCEEEeCCCCC-----CeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec
Confidence 68999876531 46888888754 254333323334333344555 45777776667899999885443 11
Q ss_pred cc------CCCCCCcc--cccCCEEEEEcCC--C---ccCcCcEEEcc---cCCCCCCCCCceEE-e----eCCEEEEEc
Q 035526 448 IQ------TSPFPPCV--IEYYPKLVSWARS--H---VPQLECWTKVS---VHPDAPMDWSAAFV-A----DRNHIFGVE 506 (557)
Q Consensus 448 i~------~~p~p~~~--~~~~~~lv~~~gG--~---~~~~~~W~~v~---~~p~~~~~~~~~~~-~----~~~~iyvvg 506 (557)
+. .+..+..+ ..+.++++.+..+ . +...+-|.... ..|.....-+.+.+ + .+++||++.
T Consensus 223 ~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~DgW~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~ 302 (334)
T 2p9w_A 223 VKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDNWKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVS 302 (334)
T ss_dssp CEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSSTTSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEE
T ss_pred ccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCCcceeEEeeeecCccccCceeEEEEeccccCCeEEEEe
Confidence 21 12222221 1256666554431 1 22344487653 33321111222222 2 689999988
Q ss_pred eee
Q 035526 507 MFK 509 (557)
Q Consensus 507 G~~ 509 (557)
++-
T Consensus 303 ~~f 305 (334)
T 2p9w_A 303 AFF 305 (334)
T ss_dssp CCG
T ss_pred eec
Confidence 763
No 194
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=56.91 E-value=1.6e+02 Score=29.23 Aligned_cols=59 Identities=10% Similarity=0.031 Sum_probs=36.9
Q ss_pred eEEEEeCCCCcEEEccCC---CCC-------------CcCceEEEEE---CCEEEEEecCCeEEEEECCCCcEEeccC
Q 035526 392 SGEIYDSVSNKWMEIQRL---PVD-------------FGVVSSGVVC---NGIFYVYSETEKLAGYYIERGFWIGIQT 450 (557)
Q Consensus 392 ~ve~YD~~t~~W~~v~~l---p~~-------------~~~~~~~vv~---~g~lYv~GG~~~i~~YD~~~~~W~~i~~ 450 (557)
.+++.+-...+|+.+..+ |.. .......++. .+.||+......++..+-...+|+.+..
T Consensus 139 gl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~ 216 (394)
T 3b7f_A 139 GLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNR 216 (394)
T ss_dssp EEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCT
T ss_pred cEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCC
Confidence 467777777889987532 210 0111122222 3678887665678888888899998753
No 195
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=56.87 E-value=1.3e+02 Score=30.02 Aligned_cols=25 Identities=4% Similarity=0.045 Sum_probs=16.4
Q ss_pred CCE-EEEEecC-CeEEEEECCCCcEEe
Q 035526 423 NGI-FYVYSET-EKLAGYYIERGFWIG 447 (557)
Q Consensus 423 ~g~-lYv~GG~-~~i~~YD~~~~~W~~ 447 (557)
++. +++.++. +.|..|++.++.+..
T Consensus 389 ~~~~~l~s~s~dg~i~iw~~~~~~~~~ 415 (430)
T 2xyi_A 389 NEPWIICSVSEDNIMQVWQMAENVYND 415 (430)
T ss_dssp SSTTEEEEEETTSEEEEEEECHHHHCC
T ss_pred CCCCEEEEEECCCCEEEeEcccccccC
Confidence 444 5555554 578899988776653
No 196
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=56.77 E-value=1.8e+02 Score=31.03 Aligned_cols=64 Identities=6% Similarity=0.022 Sum_probs=34.9
Q ss_pred ccceEEEeeCCCC-ceEEccCCCcCcce--eeEEE-EE--CCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcE
Q 035526 204 YSGEIHALDVSQD-QWHRIDASILKGRF--MFSVV-SI--MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSW 277 (557)
Q Consensus 204 ~~~~v~~yd~~~~-~W~~l~~~p~~~R~--~~s~a-~~--~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W 277 (557)
....++.+|+.+. ....+......... ..+++ +- ++++++.+..++ ...+|.+|...+..
T Consensus 282 ~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g--------------~~~l~~~~~~~~~~ 347 (706)
T 2z3z_A 282 NECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG--------------WNHLYLYDTTGRLI 347 (706)
T ss_dssp CEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS--------------SCEEEEEETTSCEE
T ss_pred CeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC--------------ccEEEEEECCCCEE
Confidence 3457889999888 66554321111000 01222 23 667555554332 24789999777666
Q ss_pred EEcc
Q 035526 278 WKVA 281 (557)
Q Consensus 278 ~~l~ 281 (557)
+.+.
T Consensus 348 ~~l~ 351 (706)
T 2z3z_A 348 RQVT 351 (706)
T ss_dssp EECC
T ss_pred EecC
Confidence 6664
No 197
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=56.01 E-value=1.6e+02 Score=29.06 Aligned_cols=25 Identities=12% Similarity=0.131 Sum_probs=18.8
Q ss_pred EEECCEEEEEecC-CeEEEEECCCCc
Q 035526 420 VVCNGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 420 vv~~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
+..++.+.+.|+. ..|..||+.+.+
T Consensus 336 ~~~~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 336 SVSNDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp EEETTEEEEEEGGGTEEEEEETTCGG
T ss_pred EECCceEEEecCCCCeEEEEECCCcc
Confidence 4448887777775 489999998765
No 198
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=55.81 E-value=1.6e+02 Score=28.86 Aligned_cols=63 Identities=11% Similarity=0.078 Sum_probs=36.2
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEE-ccCCCCC--CcCceEEEEECCEEEEEecCC-eEEEEECCCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWME-IQRLPVD--FGVVSSGVVCNGIFYVYSETE-KLAGYYIERG 443 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~-v~~lp~~--~~~~~~~vv~~g~lYv~GG~~-~i~~YD~~~~ 443 (557)
+++++.|+.+ ..+.+||..+.+-.. +..+... ....+.+...++.+.+.|+.+ .+..+|+...
T Consensus 310 g~~l~~g~~d------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 310 GRLLFAGYSN------GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp SSEEEEECTT------SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CCEEEEEECC------CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 3777777654 358999987765432 2222111 111122233477777777765 7778887643
No 199
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=55.60 E-value=1.5e+02 Score=28.46 Aligned_cols=67 Identities=7% Similarity=-0.080 Sum_probs=39.3
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC--------CeEEEEECCCCcEE
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET--------EKLAGYYIERGFWI 446 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~--------~~i~~YD~~~~~W~ 446 (557)
+.||+.... ...+.+||+.+++....-..+.......+.+...+.+|+..|. ..+..+|+.+++..
T Consensus 208 g~l~v~d~~------~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 208 DQLCVADRE------NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEII 281 (329)
T ss_dssp TEEEEEETT------TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEE
T ss_pred CEEEEEECC------CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEE
Confidence 489988753 3579999998776654432222111112233444666666653 27888887776544
Q ss_pred e
Q 035526 447 G 447 (557)
Q Consensus 447 ~ 447 (557)
.
T Consensus 282 ~ 282 (329)
T 3fvz_A 282 D 282 (329)
T ss_dssp E
T ss_pred E
Confidence 3
No 200
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=55.45 E-value=1.3e+02 Score=27.75 Aligned_cols=61 Identities=11% Similarity=-0.026 Sum_probs=32.0
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCc
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGF 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~ 444 (557)
..++.|+.++ .+.+||..+..-. ... +...........-++.+++.+....+..||+.+..
T Consensus 156 ~~l~~~~~d~------~i~i~d~~~~~~~-~~~-~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~ 216 (313)
T 3odt_A 156 NKFLTASADK------TIKLWQNDKVIKT-FSG-IHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGD 216 (313)
T ss_dssp TEEEEEETTS------CEEEEETTEEEEE-ECS-SCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCC
T ss_pred CEEEEEECCC------CEEEEecCceEEE-Eec-cCcccEEEEEEcCCCeEEEccCCCeEEEEECCchh
Confidence 5666776543 5788884332222 211 11112222334457774444444589999998765
No 201
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=55.02 E-value=2.1e+02 Score=30.20 Aligned_cols=71 Identities=17% Similarity=0.107 Sum_probs=43.2
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCc------CceEEEE-ECCEEEEEe--cCCeEEEEECCCCcEE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFG------VVSSGVV-CNGIFYVYS--ETEKLAGYYIERGFWI 446 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~------~~~~~vv-~~g~lYv~G--G~~~i~~YD~~~~~W~ 446 (557)
++|+.+..++. ..++.+|+.+++++.+........ .....+. -++++++.+ |...++.+|+.++...
T Consensus 254 ~l~~~~~~~~~----~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 329 (662)
T 3azo_A 254 SLIVATDRTGW----WNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELV 329 (662)
T ss_dssp CEEEEECTTSS----CEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEE
T ss_pred eEEEEECCCCC----eEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEE
Confidence 66666654432 368889988888988755332211 0112233 367777766 3457888899888777
Q ss_pred eccC
Q 035526 447 GIQT 450 (557)
Q Consensus 447 ~i~~ 450 (557)
.+..
T Consensus 330 ~l~~ 333 (662)
T 3azo_A 330 DAAG 333 (662)
T ss_dssp ECCS
T ss_pred EecC
Confidence 6653
No 202
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=54.63 E-value=1.5e+02 Score=28.20 Aligned_cols=61 Identities=16% Similarity=0.128 Sum_probs=34.1
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERG 443 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~ 443 (557)
+++++.|+.++ .+.+||..+.+=... +.........+...++.+.+.+..+.+..|+.+..
T Consensus 208 g~~l~s~~~dg------~i~iwd~~~~~~~~~--~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~ 268 (319)
T 3frx_A 208 GTLIASAGKDG------EIMLWNLAAKKAMYT--LSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQ 268 (319)
T ss_dssp SSEEEEEETTC------EEEEEETTTTEEEEE--EECCSCEEEEEECSSSSEEEEEETTEEEEEEETTE
T ss_pred CCEEEEEeCCC------eEEEEECCCCcEEEE--ecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcC
Confidence 47788887543 688899887642211 11111111222334566666666667888877654
No 203
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=54.20 E-value=2e+02 Score=29.71 Aligned_cols=61 Identities=15% Similarity=0.044 Sum_probs=38.6
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEE-----Ecc-CCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWM-----EIQ-RLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~-----~v~-~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~ 444 (557)
+++|++-| +..++||..+++-. .+. ..|.-....-+++..++++|++-|. ..++||..+.+
T Consensus 368 ~k~yfFkG--------~~yw~yd~~~~~~~~gYPk~I~~~fpgip~~iDAA~~~~g~~YFFkg~-~ywr~d~~~~~ 434 (450)
T 1su3_A 368 GKTYFFVA--------NKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHGT-RQYKFDPKTKR 434 (450)
T ss_dssp TEEEEEET--------TEEEEEETTTTEECSSCSEEHHHHSTTSCSCCSEEEEETTEEEEEETT-EEEEEETTTTE
T ss_pred CeEEEEeC--------CEEEEEeCCCccccCCCCcchhhcCCCCCCCccEEEEcCCeEEEEeCC-EEEEEECCcce
Confidence 49999887 36888987654321 111 1111111223445679999999986 88999987765
No 204
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=54.02 E-value=2.5e+02 Score=30.64 Aligned_cols=54 Identities=9% Similarity=-0.139 Sum_probs=33.9
Q ss_pred eEEEEeCCCCcEEEcc--CCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCcEEec
Q 035526 392 SGEIYDSVSNKWMEIQ--RLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGFWIGI 448 (557)
Q Consensus 392 ~ve~YD~~t~~W~~v~--~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~W~~i 448 (557)
-+.+||+.+++++... .+|... ..+.+.-+|.|++.+ .+.+.+||+++.+....
T Consensus 537 Gl~~~~~~~~~~~~~~~~gl~~~~--i~~i~~~~g~lWi~t-~~Gl~~~~~~~~~~~~~ 592 (758)
T 3ott_A 537 GVMRINPKDESQQSISFGSFSNNE--ILSMTCVKNSIWVST-TNGLWIIDRKTMDARQQ 592 (758)
T ss_dssp EEEEECC--CCCCBCCCCC---CC--EEEEEEETTEEEEEE-SSCEEEEETTTCCEEEC
T ss_pred ceEEEecCCCceEEecccCCCccc--eEEEEECCCCEEEEC-CCCeEEEcCCCceeEEe
Confidence 4788999998877652 344322 222344588888766 45899999999887654
No 205
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=53.83 E-value=1.3e+02 Score=27.24 Aligned_cols=58 Identities=9% Similarity=-0.044 Sum_probs=35.8
Q ss_pred cceEEEeeCCCCceEEccCCCcCcceeeEEEE-ECCEEEEEcccCCCCCCccccCCcccccceEEEEecCC-CcEEEccc
Q 035526 205 SGEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLT-KSWWKVAS 282 (557)
Q Consensus 205 ~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~-~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t-~~W~~l~~ 282 (557)
...++.+|+.+++...+..... .-.+++. -++..+++++ . ..+++||+.+ ++...+..
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~---~v~~~~~spdg~~l~~~~-~----------------~~i~~~d~~~~~~~~~~~~ 80 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE---LFEAPNWSPDGKYLLLNS-E----------------GLLYRLSLAGDPSPEKVDT 80 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS---CCEEEEECTTSSEEEEEE-T----------------TEEEEEESSSCCSCEECCC
T ss_pred ceeEEEEeCCCCceeeeccCCc---ceEeeEECCCCCEEEEEc-C----------------CeEEEEeCCCCCCceEecc
Confidence 4678899998887765544221 1223333 3556555554 1 2799999998 77776553
No 206
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=53.83 E-value=1.4e+02 Score=27.72 Aligned_cols=59 Identities=10% Similarity=0.014 Sum_probs=38.0
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEE----cc-CCCCC-----CcCceEEEE--ECCEEEEEecCCeEEEEECCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWME----IQ-RLPVD-----FGVVSSGVV--CNGIFYVYSETEKLAGYYIER 442 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~----v~-~lp~~-----~~~~~~~vv--~~g~lYv~GG~~~i~~YD~~~ 442 (557)
+++|.+-| +..++||..+++-.. +. .+|.- ....-++.. .++++|++-|. ..++||..+
T Consensus 128 gk~yfFkG--------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~-~ywr~d~~~ 198 (225)
T 3oyo_A 128 KEVYLFKG--------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ-NYVRIDFTP 198 (225)
T ss_dssp TEEEEEET--------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT-EEEEEECCT
T ss_pred CcEEEEeC--------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC-EEEEEeCCc
Confidence 49999987 357888877665443 11 12221 112233344 37999999986 899999983
No 207
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=53.20 E-value=1.7e+02 Score=28.61 Aligned_cols=187 Identities=9% Similarity=-0.118 Sum_probs=95.2
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEE--ECCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVS--IMDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~--~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
++.||+.-.. ...++.+++.......+...... .-.++++ .++.||+.-.. .+.+
T Consensus 84 ~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~--~p~glavd~~~g~ly~~d~~----------------~~~I 140 (349)
T 3v64_C 84 RELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLE--SPGGLAVDWVHDKLYWTDSG----------------TSRI 140 (349)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCS--CCCEEEEETTTTEEEEEETT----------------TTEE
T ss_pred ccEEEEEecc-----CCceEEEecCCCCceEEEeCCCC--CccEEEEecCCCeEEEEcCC----------------CCeE
Confidence 5678876432 35688899887765554322111 1134444 47899998542 2478
Q ss_pred EEEecCCCcEEEcc--cCCcCcccceEEEEe-cCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCC
Q 035526 268 LVFSPLTKSWWKVA--SMRYARSMPILGISE-VSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFD 344 (557)
Q Consensus 268 ~~ydp~t~~W~~l~--~m~~~R~~~~~~v~~-~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~ 344 (557)
+++++....-+.+. .+..|+ ..+++ .++ .+|+.--. ....++++++...
T Consensus 141 ~~~~~dG~~~~~l~~~~l~~P~----~iavdp~~g----------------~ly~td~~--------~~~~I~r~~~dG~ 192 (349)
T 3v64_C 141 EVANLDGAHRKVLLWQSLEKPR----AIALHPMEG----------------TIYWTDWG--------NTPRIEASSMDGS 192 (349)
T ss_dssp EEEETTSCSCEEEECTTCSCEE----EEEEETTTT----------------EEEEEECS--------SSCEEEEEETTSC
T ss_pred EEEcCCCCceEEEEeCCCCCcc----eEEEecCcC----------------eEEEeccC--------CCCEEEEEeCCCC
Confidence 88888765433332 222222 22233 223 45554310 1234555554432
Q ss_pred cccccCCC-CCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEEC
Q 035526 345 GFEGSLLP-NRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCN 423 (557)
Q Consensus 345 ~W~~~~~~-~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~ 423 (557)
.-+..... -....+++.-. ..++||+.-. ....|+++|+....=+.+.... .......++.+
T Consensus 193 ~~~~~~~~~~~~PnGla~d~---------~~~~lY~aD~------~~~~I~~~~~dG~~~~~~~~~~--~~~P~giav~~ 255 (349)
T 3v64_C 193 GRRIIADTHLFWPNGLTIDY---------AGRRMYWVDA------KHHVIERANLDGSHRKAVISQG--LPHPFAITVFE 255 (349)
T ss_dssp SCEESCCSSCSCEEEEEEET---------TTTEEEEEET------TTTEEEEEETTSCSCEEEECSS--CSSEEEEEEET
T ss_pred CcEEEEECCCCCcceEEEeC---------CCCEEEEEEC------CCCEEEEEeCCCCceEEEEeCC--CCCceEEEEEC
Confidence 21111111 11122333321 1248999864 2357999998754333332211 11122335579
Q ss_pred CEEEEEec-CCeEEEEECCCCc
Q 035526 424 GIFYVYSE-TEKLAGYYIERGF 444 (557)
Q Consensus 424 g~lYv~GG-~~~i~~YD~~~~~ 444 (557)
+.||+... .+.|.++|..++.
T Consensus 256 ~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 256 DSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp TEEEEEETTTTEEEEEETTTCC
T ss_pred CEEEEecCCCCeEEEEEccCCC
Confidence 99999874 4689999965543
No 208
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=53.02 E-value=1.4e+02 Score=27.55 Aligned_cols=57 Identities=16% Similarity=0.163 Sum_probs=35.1
Q ss_pred ceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEE
Q 035526 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWW 278 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~ 278 (557)
+.+..+|..+++...+-........-.+++.. ++..++.|+.++ .+.+||..+++-.
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg----------------~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA----------------EVQLWDVQQQKRL 102 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS----------------EEEEEETTTTEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC----------------cEEEeecCCceeE
Confidence 35899999998765543332221222344433 567777777543 6888998887643
No 209
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=52.99 E-value=92 Score=29.13 Aligned_cols=57 Identities=9% Similarity=-0.006 Sum_probs=32.6
Q ss_pred ceEEEEeCCCCcEEEccCCCCC--C-cCceEEEEECCEEEEE----ec--------------CCeEEEEECCCCcEEec
Q 035526 391 DSGEIYDSVSNKWMEIQRLPVD--F-GVVSSGVVCNGIFYVY----SE--------------TEKLAGYYIERGFWIGI 448 (557)
Q Consensus 391 ~~ve~YD~~t~~W~~v~~lp~~--~-~~~~~~vv~~g~lYv~----GG--------------~~~i~~YD~~~~~W~~i 448 (557)
..+.+||+.+++.+.+...... . .....++.-+|.||+. |. ...|+.||+. +....+
T Consensus 90 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 90 RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 4688888888877765331111 1 0112223347889986 32 2478999987 554443
No 210
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=52.54 E-value=2.6e+02 Score=30.42 Aligned_cols=77 Identities=12% Similarity=0.168 Sum_probs=45.0
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCC--c-eEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccce
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQD--Q-WHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKR 266 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~--~-W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~ 266 (557)
+.+|++..... .....+++.+|..+. . |..+...... .. ..+...++.||+...... ....
T Consensus 279 G~~l~~~~~~~-~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~-~~~~~dg~~l~~~s~~~~-------------~~~~ 342 (741)
T 1yr2_A 279 GRWVVITSSEG-TDPVNTVHVARVTNGKIGPVTALIPDLKA-QW-DFVDGVGDQLWFVSGDGA-------------PLKK 342 (741)
T ss_dssp SCEEEEEEECT-TCSCCEEEEEEEETTEECCCEEEECSSSS-CE-EEEEEETTEEEEEECTTC-------------TTCE
T ss_pred CCEEEEEEEcc-CCCcceEEEEECCCCCCcccEEecCCCCc-eE-EEEeccCCEEEEEECCCC-------------CCCE
Confidence 34555544322 113568899998876 6 8877653321 21 223345677887754321 2347
Q ss_pred EEEEecCC--CcEEEccc
Q 035526 267 VLVFSPLT--KSWWKVAS 282 (557)
Q Consensus 267 v~~ydp~t--~~W~~l~~ 282 (557)
++++|..+ ..|+.+-+
T Consensus 343 l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 343 IVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp EEEEECSSSSCEEEEEEC
T ss_pred EEEEeCCCCccccEEEec
Confidence 99999887 57887653
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=51.78 E-value=1.7e+02 Score=28.07 Aligned_cols=66 Identities=9% Similarity=0.023 Sum_probs=41.9
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEE-EECCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVV-SIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a-~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
++.+|+++.. ...++.||+.+++...+.. +. . -.+++ .-++.+++... ..++
T Consensus 60 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~-~~--~-v~~i~~~~dg~l~v~~~------------------~gl~ 112 (326)
T 2ghs_A 60 SGTAWWFNIL-----ERELHELHLASGRKTVHAL-PF--M-GSALAKISDSKQLIASD------------------DGLF 112 (326)
T ss_dssp TTEEEEEEGG-----GTEEEEEETTTTEEEEEEC-SS--C-EEEEEEEETTEEEEEET------------------TEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEEC-CC--c-ceEEEEeCCCeEEEEEC------------------CCEE
Confidence 4678877643 2468999999877654432 21 1 12333 34678877531 2599
Q ss_pred EEecCCCcEEEccc
Q 035526 269 VFSPLTKSWWKVAS 282 (557)
Q Consensus 269 ~ydp~t~~W~~l~~ 282 (557)
+||+.+++.+.+..
T Consensus 113 ~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 113 LRDTATGVLTLHAE 126 (326)
T ss_dssp EEETTTCCEEEEEC
T ss_pred EEECCCCcEEEEee
Confidence 99999998876644
No 212
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=51.09 E-value=2.6e+02 Score=30.09 Aligned_cols=77 Identities=10% Similarity=0.039 Sum_probs=43.9
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCC------C--ceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcc
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQ------D--QWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSF 261 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~------~--~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~ 261 (557)
+.+|++.... ......+++.+|..+ . .+..+...... ....+...++.||+.+....
T Consensus 244 g~~l~~~~~~-~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~s~~~~------------ 308 (710)
T 2xdw_A 244 GRYVLLSIRE-GCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG--EYDYVTNEGTVFTFKTNRHS------------ 308 (710)
T ss_dssp SCEEEEEEEC-SSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS--CEEEEEEETTEEEEEECTTC------------
T ss_pred CCEEEEEEEc-cCCCccEEEEEECcccccccCCccceEEeeCCCCc--EEEEEeccCCEEEEEECCCC------------
Confidence 4455544432 111246789999876 4 57777653221 12233345678888865432
Q ss_pred cccceEEEEecCCC---cEEEccc
Q 035526 262 KTHKRVLVFSPLTK---SWWKVAS 282 (557)
Q Consensus 262 ~~~~~v~~ydp~t~---~W~~l~~ 282 (557)
....++++|+.+. .|+.+.+
T Consensus 309 -~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 309 -PNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp -TTCEEEEEETTSCCGGGCEEEEC
T ss_pred -CCCEEEEEeCCCCCcccceeccC
Confidence 2347999998775 4776643
No 213
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=50.53 E-value=1.9e+02 Score=28.34 Aligned_cols=54 Identities=13% Similarity=-0.012 Sum_probs=30.9
Q ss_pred ceEEEeeCCCCceEEccCCCcCcceeeEEEEE--CCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEE
Q 035526 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVSI--MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWW 278 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~--~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~ 278 (557)
..+..+|..+.+....-... ..-.+++.. ++.+++.|+.++ .+.+||..+..-.
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~s~d~----------------~v~iwd~~~~~~~ 242 (393)
T 1erj_A 187 RTVRIWDLRTGQCSLTLSIE---DGVTTVAVSPGDGKYIAAGSLDR----------------AVRVWDSETGFLV 242 (393)
T ss_dssp SEEEEEETTTTEEEEEEECS---SCEEEEEECSTTCCEEEEEETTS----------------CEEEEETTTCCEE
T ss_pred CcEEEEECCCCeeEEEEEcC---CCcEEEEEECCCCCEEEEEcCCC----------------cEEEEECCCCcEE
Confidence 45788898877643322211 111223332 567777777543 5888898876543
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=49.82 E-value=2.1e+02 Score=28.66 Aligned_cols=26 Identities=8% Similarity=0.144 Sum_probs=20.4
Q ss_pred CCEEEEEecCCeEEEEECCCCcEEec
Q 035526 423 NGIFYVYSETEKLAGYYIERGFWIGI 448 (557)
Q Consensus 423 ~g~lYv~GG~~~i~~YD~~~~~W~~i 448 (557)
++.||+......|.+||+++.....+
T Consensus 230 ~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 230 EEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp SSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred CCeEEEEECCCcEEEEECCCCCEEEE
Confidence 68999966656899999988765544
No 215
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=49.23 E-value=1.9e+02 Score=27.82 Aligned_cols=65 Identities=12% Similarity=0.015 Sum_probs=36.6
Q ss_pred ceEEEeeCCCCceEEccCCCcCcceeeEEEE-ECCE-EEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcccC
Q 035526 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVS-IMDD-VYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVASM 283 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~-~~~~-IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~m 283 (557)
..++.+|.....+..+.. ..+......++. -+++ |++.+...+. ....+++||+.+++...+...
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~------------~~~~l~~~d~~~g~~~~l~~~ 282 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQ------------TDRVIYKANPETLENEEVMVM 282 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETTT------------CCEEEEEECTTTCCEEEEEEC
T ss_pred ceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCCC------------ccceEEEEECCCCCeEEeeeC
Confidence 578999998888777755 211112222232 2444 5444322111 123599999998887766543
No 216
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=49.00 E-value=2.3e+02 Score=29.44 Aligned_cols=59 Identities=10% Similarity=-0.055 Sum_probs=35.1
Q ss_pred EEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEccc
Q 035526 208 IHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVAS 282 (557)
Q Consensus 208 v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~ 282 (557)
...||..+++..++...+. . ....+-+|+..++++.... ....++++|+.+++++.+..
T Consensus 134 ~~l~d~~~g~~~~l~~~~~---~-~~~~spDG~~la~~~~~~~------------~~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG---F-GFVSDIRGDLIAGLGFFGG------------GRVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp EEEEEEETTEEEEEEEESS---C-EEEEEEETTEEEEEEEEET------------TEEEEEEEETTTCCCEEECC
T ss_pred ceEEEccCCcEEEeecCCC---c-eEEECCCCCEEEEEEEcCC------------CCeEEEEEcCCCCCceEeec
Confidence 3477888887766654332 2 2223345555555443321 12469999999999887754
No 217
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=48.48 E-value=1.6e+02 Score=26.70 Aligned_cols=58 Identities=10% Similarity=0.057 Sum_probs=36.6
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEE-----cc---CCCCCCcCceEEEEE-CC-EEEEEecCCeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWME-----IQ---RLPVDFGVVSSGVVC-NG-IFYVYSETEKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~-----v~---~lp~~~~~~~~~vv~-~g-~lYv~GG~~~i~~YD~~~~~ 444 (557)
+++|.+-| +..++||..+++=.. +. .+|.. ..++... ++ ++|++-|. ..++||..+.+
T Consensus 110 g~~yfFkG--------~~yw~yd~~~~~v~~gyPk~i~~~~gip~~---idaAf~~~~~~~~YfFkg~-~y~r~d~~~~~ 177 (196)
T 3c7x_A 110 GKTYFFRG--------NKYYRFNEELRAVDSEYPKNIKVWEGIPES---PRGSFMGSDEVFTYFYKGN-KYWKFNNQKLK 177 (196)
T ss_dssp TEEEEEET--------TEEEEEETTTTEECTTCSEEGGGSBTCCSS---CSEEEECTTSSEEEEEETT-EEEEEETTTTE
T ss_pred CEEEEEEC--------CEEEEEeCCcccccCCCCccHHHCCCcCCC---cceeEEecCCCEEEEEECC-EEEEEECCcce
Confidence 49999877 357889987753211 11 22321 2233333 44 99999886 88999988764
No 218
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=47.14 E-value=2.1e+02 Score=27.90 Aligned_cols=254 Identities=11% Similarity=0.038 Sum_probs=0.0
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLV 269 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ 269 (557)
...+|+.-...+......++.||+.+.+-...-+....+ +.++.--+..+|+..-.......+ ...+.+.+
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g-------~~~~~v~v 85 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRG-------KRSDVVEV 85 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSS-------CEEEEEEE
T ss_pred CCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccC-------CCCCEEEE
Q ss_pred EecCCCcEEEcccCCcCcc----cceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCc
Q 035526 270 FSPLTKSWWKVASMRYARS----MPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDG 345 (557)
Q Consensus 270 ydp~t~~W~~l~~m~~~R~----~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~ 345 (557)
||+.+.+-..--+++..+. .+....+.-+| ..+|+. +....+++..||..+.+
T Consensus 86 ~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg---------------~~l~v~--------n~~~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 86 WDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDG---------------KFIVLQ--------NASPATSIGIVDVAKGD 142 (361)
T ss_dssp EETTTCCEEEEEEECTTBCCBCCCGGGEEECTTS---------------SEEEEE--------EESSSEEEEEEETTTTE
T ss_pred EECcCCcEEEEEEcCccccccCCCcceEEECCCC---------------CEEEEE--------CCCCCCeEEEEECCCCc
Q ss_pred cccc------------CCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCC-----------------------
Q 035526 346 FEGS------------LLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPL----------------------- 390 (557)
Q Consensus 346 W~~~------------~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l----------------------- 390 (557)
-... .|.....+.+..-++ ++.++.-..... ..
T Consensus 143 ~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg-----------~~~~v~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (361)
T 2oiz_A 143 YVEDVTAAAGCWSVIPQPNRPRSFMTICGDG-----------GLLTINLGEDGK-VASQSRSKQMFSVKDDPIFIAPALD 210 (361)
T ss_dssp EEEEEGGGTTEEEEEECTTSSSEEEEEETTS-----------SEEEEEECTTSS-EEEEEECCCCSCTTTSCBCSCCEEC
T ss_pred EEEEEecCCCcceeEEcCCCCeeEEEECCCC-----------cEEEEEECCCCc-EeeeccccceEcCCCCceEEEeccc
Q ss_pred ----------ceEEEEeCCCCcEEEccCCCC-----------CCcCceEEEEEC-CEEEEEec-----------CCeEEE
Q 035526 391 ----------DSGEIYDSVSNKWMEIQRLPV-----------DFGVVSSGVVCN-GIFYVYSE-----------TEKLAG 437 (557)
Q Consensus 391 ----------~~ve~YD~~t~~W~~v~~lp~-----------~~~~~~~~vv~~-g~lYv~GG-----------~~~i~~ 437 (557)
..+.++|...++-..+...+. +......+..-+ +++|+... .+.+..
T Consensus 211 g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~v 290 (361)
T 2oiz_A 211 KDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWV 290 (361)
T ss_dssp SSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEE
T ss_pred CCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEE
Q ss_pred EECCCCcEEeccCCCCCCcccccCCEEEEEcCCCccCcCcEEEcccCCCCCCCCCceEEeeCCEEEEEceeeEeceEeee
Q 035526 438 YYIERGFWIGIQTSPFPPCVIEYYPKLVSWARSHVPQLECWTKVSVHPDAPMDWSAAFVADRNHIFGVEMFKIFGQVLDF 517 (557)
Q Consensus 438 YD~~~~~W~~i~~~p~p~~~~~~~~~lv~~~gG~~~~~~~W~~v~~~p~~~~~~~~~~~~~~~~iyvvgG~~~~g~~~~~ 517 (557)
+|+++.+ .+..++... ..+.++...+..|| ..+. +.
T Consensus 291 iD~~t~~-----------------------------------~v~~i~~~~-p~~ia~spdg~~l~------v~n~--~~ 326 (361)
T 2oiz_A 291 MDTKTKQ-----------------------------------RVARIPGRD-ALSMTIDQQRNLML------TLDG--GN 326 (361)
T ss_dssp EETTTTE-----------------------------------EEEEEECTT-CCEEEEETTTTEEE------EECS--SC
T ss_pred EECCCCc-----------------------------------EEEEEecCC-eeEEEECCCCCEEE------EeCC--Ce
Q ss_pred EEEEecCCCCCCc--eeccc
Q 035526 518 LTVCDVSEKWMNW--SHISR 535 (557)
Q Consensus 518 v~vy~~~d~~~~W--~~i~~ 535 (557)
+.+| |. .++ +.+..
T Consensus 327 v~v~---D~-~t~~l~~~~~ 342 (361)
T 2oiz_A 327 VNVY---DI-SQPEPKLLRT 342 (361)
T ss_dssp EEEE---EC-SSSSCEEEEE
T ss_pred EEEE---EC-CCCcceeeEE
No 219
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=45.63 E-value=1.4e+02 Score=30.52 Aligned_cols=60 Identities=8% Similarity=-0.124 Sum_probs=32.6
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECC-EEEEEec-CCeEEEEECC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNG-IFYVYSE-TEKLAGYYIE 441 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g-~lYv~GG-~~~i~~YD~~ 441 (557)
.||+..-. ...+.+||+.+..-+.+..++....-...++.-++ .|||... .+.|.+||.+
T Consensus 239 ~lyv~d~~------~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 239 ELYFNSWN------AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CEEEEETT------TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECC------CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 67776531 24688899887655344333221111112222345 4999864 4588887654
No 220
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=45.58 E-value=2.2e+02 Score=27.67 Aligned_cols=61 Identities=8% Similarity=0.170 Sum_probs=34.5
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEcc--CCCCCCcCceEEEEE---CCEEEEEecCC-eEEEEECCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQ--RLPVDFGVVSSGVVC---NGIFYVYSETE-KLAGYYIER 442 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~--~lp~~~~~~~~~vv~---~g~lYv~GG~~-~i~~YD~~~ 442 (557)
..++.|+.+ ..+.+||..+++-...- ..+......-..+.. ++.+++.|+.+ .+..||+..
T Consensus 171 ~~l~s~s~D------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~ 237 (380)
T 3iz6_a 171 TRLITGSGD------QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRI 237 (380)
T ss_dssp SCEEEECTT------SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTT
T ss_pred CEEEEECCC------CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCC
Confidence 445566543 35888999887655432 122221111111222 66777777764 889999863
No 221
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=45.33 E-value=3.1e+02 Score=29.20 Aligned_cols=69 Identities=12% Similarity=0.025 Sum_probs=39.7
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEE-EC-CEEEEEecCC-----eEEEEECCCCcEEe
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVV-CN-GIFYVYSETE-----KLAGYYIERGFWIG 447 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv-~~-g~lYv~GG~~-----~i~~YD~~~~~W~~ 447 (557)
+++++.+..++ ...++.+|......+.+..-... .....+. -+ +.||+.+..+ .++.+|+.++....
T Consensus 323 g~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~~~~~--v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 396 (706)
T 2z3z_A 323 NQFIWQSRRDG----WNHLYLYDTTGRLIRQVTKGEWE--VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKD 396 (706)
T ss_dssp SEEEEEECTTS----SCEEEEEETTSCEEEECCCSSSC--EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEE
T ss_pred CEEEEEEccCC----ccEEEEEECCCCEEEecCCCCeE--EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCcee
Confidence 46666665443 35688888777777776432111 1111122 23 4677766542 78888988877666
Q ss_pred cc
Q 035526 448 IQ 449 (557)
Q Consensus 448 i~ 449 (557)
+.
T Consensus 397 l~ 398 (706)
T 2z3z_A 397 LT 398 (706)
T ss_dssp SC
T ss_pred cc
Confidence 65
No 222
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=43.68 E-value=1.5e+02 Score=31.95 Aligned_cols=66 Identities=11% Similarity=0.050 Sum_probs=42.9
Q ss_pred EEEEEcccCCCCCCCceEEEEeC-CCC--cEEEccCCCCC-----Cc--CceEEEE--ECCE----EEEEecCCeEEEEE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDS-VSN--KWMEIQRLPVD-----FG--VVSSGVV--CNGI----FYVYSETEKLAGYY 439 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~-~t~--~W~~v~~lp~~-----~~--~~~~~vv--~~g~----lYv~GG~~~i~~YD 439 (557)
+||+...+ ...+..+|. .+. .|+.-...+.. .. .....++ .+++ ||+......+.++|
T Consensus 64 ~vyv~~~~------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlD 137 (599)
T 1w6s_A 64 KMYIHTSF------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALN 137 (599)
T ss_dssp EEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEE
T ss_pred EEEEEeCC------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEE
Confidence 89988752 235889998 776 59876443221 00 0012245 5777 99987767999999
Q ss_pred CCCCc--EEe
Q 035526 440 IERGF--WIG 447 (557)
Q Consensus 440 ~~~~~--W~~ 447 (557)
.++++ |+.
T Consensus 138 a~TG~~~W~~ 147 (599)
T 1w6s_A 138 AETGETVWKV 147 (599)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCCEEEee
Confidence 98765 654
No 223
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=43.63 E-value=31 Score=33.29 Aligned_cols=60 Identities=10% Similarity=0.046 Sum_probs=38.1
Q ss_pred ceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEec---CCeEEEEECCCCcEEeccC
Q 035526 391 DSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSE---TEKLAGYYIERGFWIGIQT 450 (557)
Q Consensus 391 ~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG---~~~i~~YD~~~~~W~~i~~ 450 (557)
-.++.+|..+++++.+........-...+..-+|+||+.+. ...+..||+.++.++.+..
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeee
Confidence 35677788888887754322211111223344788888875 2589999998888776654
No 224
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=43.35 E-value=2.1e+02 Score=26.75 Aligned_cols=60 Identities=10% Similarity=-0.003 Sum_probs=31.2
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEE-EECC-EE-EEEecCCeEEEEECCCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGV-VCNG-IF-YVYSETEKLAGYYIERG 443 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~v-v~~g-~l-Yv~GG~~~i~~YD~~~~ 443 (557)
.+++.|+.++ .+.+||..+.+-...-...... ..+.+ ..++ .. ++.|..+.+..+++..+
T Consensus 241 ~~l~s~s~Dg------~i~iWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~asg~~~g~~~~~~~~~ 303 (304)
T 2ynn_A 241 PIIISGSEDG------TLKIWNSSTYKVEKTLNVGLER--SWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (304)
T ss_dssp SEEEEEETTS------CEEEEETTTCCEEEEECCSSSS--EEEEEECTTCGGGCEEEEETTEEEEEECC--
T ss_pred CEEEEEcCCC------eEEEEECCCCceeeeccCCCcc--EEEEEECCCCCceEEEEecCCceEEEEeccC
Confidence 6777777654 5889998876544332222211 11222 2233 34 44455567777777654
No 225
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=42.03 E-value=3.4e+02 Score=28.77 Aligned_cols=62 Identities=15% Similarity=0.089 Sum_probs=37.8
Q ss_pred CceEEEEeCCCCcEEE---c-cCCCCCCcCceEEEEE--CCEEEEEe--cCCeEEEEECCCCc-----EEeccCCCC
Q 035526 390 LDSGEIYDSVSNKWME---I-QRLPVDFGVVSSGVVC--NGIFYVYS--ETEKLAGYYIERGF-----WIGIQTSPF 453 (557)
Q Consensus 390 l~~ve~YD~~t~~W~~---v-~~lp~~~~~~~~~vv~--~g~lYv~G--G~~~i~~YD~~~~~-----W~~i~~~p~ 453 (557)
.+.+.++|..+++=.. + ...|.+..+ +..+. ++.+|+.+ |.+.|..+|..+.. |+.+..++.
T Consensus 363 sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g--~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~ 437 (567)
T 1qks_A 363 RNKLVVIDTKEGKLVAIEDTGGQTPHPGRG--ANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA 437 (567)
T ss_dssp GTEEEEEETTTTEEEEEEECSSSSBCCTTC--EEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred CCeEEEEECCCCcEEEEEeccCcCCCCccc--eeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEec
Confidence 3568889988875322 2 234444332 22233 36788876 45689999987643 888776554
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=41.83 E-value=2.8e+02 Score=27.67 Aligned_cols=59 Identities=7% Similarity=-0.126 Sum_probs=34.7
Q ss_pred CcCcEEEcccCCCCCCCCCceEEeeCCEEEEEceeeEeceEeeeEEEEecCCCCCCceecccCCcCcc
Q 035526 474 QLECWTKVSVHPDAPMDWSAAFVADRNHIFGVEMFKIFGQVLDFLTVCDVSEKWMNWSHISRNHMDYE 541 (557)
Q Consensus 474 ~~~~W~~v~~~p~~~~~~~~~~~~~~~~iyvvgG~~~~g~~~~~v~vy~~~d~~~~W~~i~~~~~~~~ 541 (557)
+..+.+.+..+|......+.++..++.++|+..++ .-+.|.|+ |. .+|+.+...++...
T Consensus 300 D~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~-----~~~~VsVI---D~-~t~kvv~~I~vg~~ 358 (368)
T 1mda_H 300 TASVGQTSGPISNGHDSDAIIAAQDGASDNYANSA-----GTEVLDIY---DA-ASDQDQSSVELDKG 358 (368)
T ss_dssp ESSSCCEEECCEEEEEECEEEECCSSSCEEEEEET-----TTTEEEEE---ES-SSCEEEEECCCCSC
T ss_pred ECCCCeEEEEEECCCCcceEEECCCCCEEEEEccC-----CCCeEEEE---EC-CCCcEEEEEECCCC
Confidence 35556666666544334555554555667755542 13678888 66 66777766665543
No 227
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=40.79 E-value=2.9e+02 Score=27.62 Aligned_cols=196 Identities=11% Similarity=0.013 Sum_probs=95.2
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLV 269 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ 269 (557)
++.||+.... ...+..+|+.++.-..+......++ .++..-++.||+...... ..+++
T Consensus 141 ~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~~---------------~~I~~ 198 (409)
T 3hrp_A 141 NNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEGT---------------HTVYV 198 (409)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSSTT---------------CEEEE
T ss_pred CCCEEEEecC-----CCcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCCC---------------ceEEE
Confidence 5567777542 3568999999877665543321111 222222456777654211 27999
Q ss_pred EecCCCc-EEEcccCCc-Cccc-ceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCCcc
Q 035526 270 FSPLTKS-WWKVASMRY-ARSM-PILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFDGF 346 (557)
Q Consensus 270 ydp~t~~-W~~l~~m~~-~R~~-~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~~W 346 (557)
+|+.++. ...+..... .-.. ..+++-..++ .+|+... ...+.+||+.....
T Consensus 199 ~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g----------------~lyv~d~----------~~~I~~~d~~~~~~ 252 (409)
T 3hrp_A 199 YMKASGWAPTRIGQLGSTFSGKIGAVALDETEE----------------WLYFVDS----------NKNFGRFNVKTQEV 252 (409)
T ss_dssp EEGGGTTCEEEEEECCTTSCSCCCBCEECTTSS----------------EEEEECT----------TCEEEEEETTTCCE
T ss_pred EEcCCCceeEEeeeccchhcCCcEEEEEeCCCC----------------eEEEEEC----------CCcEEEEECCCCCE
Confidence 9987653 233311111 1111 1122221123 6676322 12455666654432
Q ss_pred ccc----C-CCCCCC-c-eEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCC-C-------
Q 035526 347 EGS----L-LPNRKS-Y-KFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLP-V------- 411 (557)
Q Consensus 347 ~~~----~-~~~r~~-~-~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp-~------- 411 (557)
... . ...... + .++.-.. .+.||+.... ...+.+||+... ...+...+ .
T Consensus 253 ~~~~~~~~~g~~~~~P~~~ia~~p~---------~g~lyv~d~~------~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~ 316 (409)
T 3hrp_A 253 TLIKQLELSGSLGTNPGPYLIYYFV---------DSNFYMSDQN------LSSVYKITPDGE-CEWFCGSATQKTVQDGL 316 (409)
T ss_dssp EEEEECCCCSCCCCSSCCEEEEETT---------TTEEEEEETT------TTEEEEECTTCC-EEEEEECTTCCSCBCEE
T ss_pred EEEecccccCCCCCCccccEEEeCC---------CCEEEEEeCC------CCEEEEEecCCC-EEEEEeCCCCCCcCCCc
Confidence 210 1 111111 2 3443321 1489987642 357899988765 22222111 0
Q ss_pred ----CCcCceEEEE-ECCEEEEEec--CCeEEEEECCCCcEEecc
Q 035526 412 ----DFGVVSSGVV-CNGIFYVYSE--TEKLAGYYIERGFWIGIQ 449 (557)
Q Consensus 412 ----~~~~~~~~vv-~~g~lYv~GG--~~~i~~YD~~~~~W~~i~ 449 (557)
........++ -+|.|||... .+.|.+||+.++.-..+.
T Consensus 317 ~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 317 REEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp GGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEE
T ss_pred ccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEe
Confidence 0111112222 3578999874 468999997666654443
No 228
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=40.64 E-value=2.2e+02 Score=30.34 Aligned_cols=65 Identities=15% Similarity=0.238 Sum_probs=44.0
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCC--cEEEccCCCCCCc-----CceEEEEECCEEEEEecCCeEEEEECCCCc--EE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSN--KWMEIQRLPVDFG-----VVSSGVVCNGIFYVYSETEKLAGYYIERGF--WI 446 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~--~W~~v~~lp~~~~-----~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~--W~ 446 (557)
+||+.... ..+..+|..+. .|+.-...+.... .....++.+++||+......+.++|.++++ |+
T Consensus 70 ~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~ 142 (582)
T 1flg_A 70 VIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWK 142 (582)
T ss_dssp EEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEE
T ss_pred EEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEee
Confidence 89987753 23889998876 4987544332110 001235679999998777799999998775 76
Q ss_pred e
Q 035526 447 G 447 (557)
Q Consensus 447 ~ 447 (557)
.
T Consensus 143 ~ 143 (582)
T 1flg_A 143 K 143 (582)
T ss_dssp E
T ss_pred e
Confidence 4
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=40.50 E-value=2.2e+02 Score=26.08 Aligned_cols=63 Identities=11% Similarity=-0.045 Sum_probs=35.0
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEE--CCEEEEEecC---CeEEEEECCCCcEE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVC--NGIFYVYSET---EKLAGYYIERGFWI 446 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~--~g~lYv~GG~---~~i~~YD~~~~~W~ 446 (557)
+||+.... ...+.++|+....-+.+.... .......++. ++.||+.... ..|.+++++...-.
T Consensus 92 ~lyv~d~~------~~~I~~~~~~g~~~~~~~~~~--~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~ 159 (267)
T 1npe_A 92 TIFWTDSQ------LDRIEVAKMDGTQRRVLFDTG--LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR 159 (267)
T ss_dssp EEEEEETT------TTEEEEEETTSCSCEEEECSS--CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred eEEEEECC------CCEEEEEEcCCCCEEEEEECC--CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE
Confidence 67776542 246777877654333332111 1111222333 6899998743 58899998754433
No 230
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=39.39 E-value=2.7e+02 Score=26.79 Aligned_cols=68 Identities=12% Similarity=-0.023 Sum_probs=37.6
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCC-CCcEEEccC--CCCCCcCceEEEE-ECCEEEEEecCCeEEEEECCCCcEEeccC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSV-SNKWMEIQR--LPVDFGVVSSGVV-CNGIFYVYSETEKLAGYYIERGFWIGIQT 450 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~-t~~W~~v~~--lp~~~~~~~~~vv-~~g~lYv~GG~~~i~~YD~~~~~W~~i~~ 450 (557)
+.+|+++.. ..+...+.. -.+|+.+.. ++..... ...+. -++.+|+.|+...++.-.=.-.+|+.+..
T Consensus 216 g~~~~~~~~-------G~~~~s~~D~G~tW~~~~~~~~~~~~~~-~~v~~~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 216 GRLWMIVNG-------GKIAFSDPDNSENWGELLSPLRRNSVGF-LDLAYRTPNEVWLAGGAGALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp SCEEEEETT-------TEEEEEETTEEEEECCCBCTTSSCCSCE-EEEEESSSSCEEEEESTTCEEEESSTTSSCEECGG
T ss_pred CCEEEEeCC-------ceEEEecCCCCCeeEeccCCcccCCcce-EEEEecCCCEEEEEeCCCeEEEeCCCCcccEEcCc
Confidence 378877642 123444222 457998753 3332222 22222 26789999877656544334578998874
No 231
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=39.19 E-value=2.5e+02 Score=26.35 Aligned_cols=63 Identities=11% Similarity=-0.024 Sum_probs=34.5
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEcc-CCCCCCcCceEEEE-ECCEEEEEecC-CeEEEEECCCCc
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQ-RLPVDFGVVSSGVV-CNGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~-~lp~~~~~~~~~vv-~~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
.+++.|+.++ .+.+||..+.+-...- .+..........+. -++...+.|+. ..+..||+.+..
T Consensus 129 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 129 NLLLSVSKDH------ALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp TEEEEEETTS------CEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred CEEEEEeCCC------eEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCc
Confidence 5666666533 5888888877544332 11221122222222 24555555554 589999998654
No 232
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=37.38 E-value=2.5e+02 Score=25.94 Aligned_cols=66 Identities=15% Similarity=0.085 Sum_probs=36.2
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCC----CcCceEEEEECC-EEEEEe------------cCCeEEEE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVD----FGVVSSGVVCNG-IFYVYS------------ETEKLAGY 438 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~----~~~~~~~vv~~g-~lYv~G------------G~~~i~~Y 438 (557)
.+|+.+.. -..+.+||+.+.+-...-..+.. ......+..-++ .||+.. +...+..|
T Consensus 47 ~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~ 120 (337)
T 1pby_B 47 IAYATVNK------SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120 (337)
T ss_dssp EEEEEETT------TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEE
T ss_pred EEEEEeCC------CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEE
Confidence 56665542 24688888887764432222210 011122222344 777775 24689999
Q ss_pred ECCCCcEEe
Q 035526 439 YIERGFWIG 447 (557)
Q Consensus 439 D~~~~~W~~ 447 (557)
|+.+.+...
T Consensus 121 d~~~~~~~~ 129 (337)
T 1pby_B 121 DAETLSRRK 129 (337)
T ss_dssp ETTTTEEEE
T ss_pred ECCCCcEEE
Confidence 998876543
No 233
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=36.96 E-value=3.7e+02 Score=27.78 Aligned_cols=55 Identities=15% Similarity=-0.125 Sum_probs=33.6
Q ss_pred ceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecC-C--eEEEEECCCCcEEe
Q 035526 391 DSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSET-E--KLAGYYIERGFWIG 447 (557)
Q Consensus 391 ~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~-~--~i~~YD~~~~~W~~ 447 (557)
..++++|+.+++++.+..-+... ...+..-||+..+.+.. . .|+.+|++++....
T Consensus 175 ~~i~~~d~~~g~~~~l~~~~~~~--~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~ 232 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFDSGEGSF--SSASISPGMKVTAGLETAREARLVTVDPRDGSVED 232 (582)
T ss_dssp EEEEEEETTTCCCEEECCSSCEE--EEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEE
T ss_pred eEEEEEcCCCCCceEeecCCCcc--ccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEE
Confidence 35888998888888764322111 11223346654444433 2 79999999988773
No 234
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=35.28 E-value=3.4e+02 Score=26.78 Aligned_cols=78 Identities=12% Similarity=-0.101 Sum_probs=40.2
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLV 269 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ 269 (557)
..++|+.-+....... .+..||+.+.+- +..++.....+..+.--+..+||..-....... ....+.+.+
T Consensus 32 ~~~~yv~~~~~~~~~~-~v~v~D~~t~~~--~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~r-------g~~~~~v~v 101 (373)
T 2mad_H 32 GRRSYINLPAHHSAII-QQWVLDAGSGSI--LGHVNGGFLPNPVAAHSGSEFALASTSFSRIAK-------GKRTDYVEV 101 (373)
T ss_pred CCEEEEeCCcccCCcc-EEEEEECCCCeE--EEEecCCCCCCeEECCCCCEEEEEecccccccc-------CCCCCeEEE
Confidence 4578887541111111 789999988764 233332212222222335589988532211000 012457899
Q ss_pred EecCCCcE
Q 035526 270 FSPLTKSW 277 (557)
Q Consensus 270 ydp~t~~W 277 (557)
||+.+.+-
T Consensus 102 iD~~t~~~ 109 (373)
T 2mad_H 102 FDPVTFLP 109 (373)
T ss_pred EECCCCcE
Confidence 99987643
No 235
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=35.00 E-value=4.1e+02 Score=28.90 Aligned_cols=59 Identities=3% Similarity=-0.116 Sum_probs=32.5
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEcc--CCCCCCcCceEEEE--ECCEEEEEec-CCeEEEEECCC
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQ--RLPVDFGVVSSGVV--CNGIFYVYSE-TEKLAGYYIER 442 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~--~lp~~~~~~~~~vv--~~g~lYv~GG-~~~i~~YD~~~ 442 (557)
++||+..-. ....|+++++....-+.+. .+..+ ...++ .+++||+.-. .+.|.+||+..
T Consensus 508 g~ly~td~~-----~~~~I~~~~~dG~~~~~l~~~~l~~P----nGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 508 GFMYWTDWG-----TPAKIKKGGLNGVDIYSLVTENIQWP----NGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp SCCEECCCS-----SSCCEEBCCSSSCCCCEESCSSCSSC----CCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CcEEEcccC-----CCCeEEEEeCCCCCeeEEEeCCCCCc----cEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 377775421 1246777776544333332 12211 12233 2588999874 46899999864
No 236
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=34.60 E-value=4.6e+02 Score=28.08 Aligned_cols=62 Identities=13% Similarity=0.270 Sum_probs=36.6
Q ss_pred cceEEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCc---EEEcc
Q 035526 205 SGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKS---WWKVA 281 (557)
Q Consensus 205 ~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~---W~~l~ 281 (557)
..+++.+|..+..|..+..... .....+..++.+|+....+. ....++++|+.+.. |+.+-
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~---~~~~~~~~~g~l~~~s~~~~-------------~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVG---AKYEVHAWKDRFYVLTDEGA-------------PRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSS---CCEEEEEETTEEEEEECTTC-------------TTCEEEEEBTTBCSGGGCEEEE
T ss_pred ceEEEEEcCCCCceEEeecCCC---ceEEEEecCCcEEEEECCCC-------------CCCEEEEEeCCCCCccCCeEEe
Confidence 4578888877778887765322 12223335666666643221 23479999987654 77654
Q ss_pred c
Q 035526 282 S 282 (557)
Q Consensus 282 ~ 282 (557)
+
T Consensus 315 ~ 315 (695)
T 2bkl_A 315 P 315 (695)
T ss_dssp C
T ss_pred c
Confidence 3
No 237
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=33.36 E-value=3e+02 Score=25.68 Aligned_cols=52 Identities=10% Similarity=0.057 Sum_probs=32.3
Q ss_pred CceEEEEeCCCCcEEEccCCCCCCcCceEEEEECC-EEEEEecC------CeEEEEECCCCc
Q 035526 390 LDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNG-IFYVYSET------EKLAGYYIERGF 444 (557)
Q Consensus 390 l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g-~lYv~GG~------~~i~~YD~~~~~ 444 (557)
...+++||+.+++.+.+. ...... ..+..-++ .||+.... +.|.+||+..+.
T Consensus 168 ~~~v~~~d~~~g~~~~~~--~~~~p~-gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA--DLDHPN-GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp CEEEEEECSSSCCCEEEE--EESSEE-EEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred CCeEEEEcCCCCcEEEEe--cCCCCc-ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 357999999888887764 111111 12222344 58887653 589999987654
No 238
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=32.93 E-value=4.8e+02 Score=27.87 Aligned_cols=69 Identities=12% Similarity=0.035 Sum_probs=40.2
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCc---EEEccCCCCCCcCceEEEEECCEEEEEecC---CeEEEEECCCCcEEec
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNK---WMEIQRLPVDFGVVSSGVVCNGIFYVYSET---EKLAGYYIERGFWIGI 448 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~---W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~---~~i~~YD~~~~~W~~i 448 (557)
.+|+....+. ....+..+|..+.. |+.+-+-...... ......++.|++.... ..++.+|+....-..+
T Consensus 283 ~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l-~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 283 RFYVLTDEGA---PRQRVFEVDPAKPARASWKEIVPEDSSASL-LSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp EEEEEECTTC---TTCEEEEEBTTBCSGGGCEEEECCCSSCEE-EEEEEETTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred cEEEEECCCC---CCCEEEEEeCCCCCccCCeEEecCCCCCeE-EEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 5666544321 34678899987754 8887542212111 2234458888887643 4788888765544444
No 239
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=32.75 E-value=3.4e+02 Score=25.99 Aligned_cols=64 Identities=6% Similarity=-0.094 Sum_probs=36.7
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceE-EEEECCEEEEEecC-CeEEEEECCCCcE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSS-GVVCNGIFYVYSET-EKLAGYYIERGFW 445 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~-~vv~~g~lYv~GG~-~~i~~YD~~~~~W 445 (557)
.+++.|+.+ ..+.+||..+.....+...........+ ....++.+.+.|+. ..+..||+....-
T Consensus 132 ~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 197 (383)
T 3ei3_B 132 NQLFVSSIR------GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEI 197 (383)
T ss_dssp EEEEEEETT------TEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEE
T ss_pred CEEEEEeCC------CEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEE
Confidence 566666643 3588899887776666433221111122 23335566666655 5899999864433
No 240
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=32.59 E-value=1e+02 Score=28.76 Aligned_cols=56 Identities=16% Similarity=0.040 Sum_probs=36.9
Q ss_pred ceEEEEeCCCCcEEEccCCCC---CCcCceEEEE-EC-CEEEEEecCCeEEEEECCCCcEEec
Q 035526 391 DSGEIYDSVSNKWMEIQRLPV---DFGVVSSGVV-CN-GIFYVYSETEKLAGYYIERGFWIGI 448 (557)
Q Consensus 391 ~~ve~YD~~t~~W~~v~~lp~---~~~~~~~~vv-~~-g~lYv~GG~~~i~~YD~~~~~W~~i 448 (557)
..+.+||+.+++++.+.. |. ........++ -+ +.||+.+..+.+..||++ ++...+
T Consensus 46 ~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~ 106 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICK-PEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEI 106 (314)
T ss_dssp CEEEEECTTTCCEEEEEC-CEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEEC
T ss_pred CEEEEEeCCCCcEEEEEe-cccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEE
Confidence 468999999998876642 10 0011112222 35 899998866689999999 777665
No 241
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=32.05 E-value=2.8e+02 Score=24.89 Aligned_cols=58 Identities=10% Similarity=0.031 Sum_probs=38.4
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEE-----Ec----cCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWM-----EI----QRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~-----~v----~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~ 444 (557)
+++|++-| +..+.||..+++=. .+ ..+|.. ..++...+|.+|++-|. ..+.||..+..
T Consensus 110 g~~yfFkg--------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~~---idaa~~~~g~~Yffkg~-~y~~~~~~~~~ 176 (195)
T 1itv_A 110 GKMLLFSG--------RRLWRFDVKAQMVDPRSASEVDRMFPGVPLD---THDVFQFREKAYFCQDR-FYWRVSSRSEL 176 (195)
T ss_dssp TEEEEEET--------TEEEEEETTTTEECGGGCEEHHHHSTTSCSS---CSEEEEETTEEEEEETT-EEEEEECCTTC
T ss_pred CeEEEEeC--------CEEEEEeCCcccccCCCccChhhcCCCCCCC---CCEEEEeCCeEEEEeCC-EEEEEECCccE
Confidence 59999877 35788998775321 11 122321 23445668999999986 88899987664
No 242
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=31.66 E-value=3.5e+02 Score=25.83 Aligned_cols=65 Identities=9% Similarity=-0.011 Sum_probs=35.4
Q ss_pred ceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEccc
Q 035526 206 GEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVAS 282 (557)
Q Consensus 206 ~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~~ 282 (557)
..++.+|+.+++-..+...+. ...+...+- +++..++....... .....++.+|+.+...+.+..
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~--~~~~~~~sp~dg~~l~~~~~~~~~----------~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ--WLGHPIYRPYDDSTVAFCHEGPHD----------LVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS--CEEEEEEETTEEEEEEEEECSCTT----------TSSCSEEEEETTSCCCEESCC
T ss_pred ceEEEEECCCCceEEeecCCc--cccccEECCCCCCEEEEEEecCCC----------CCcceEEEEeCCCCceEEeee
Confidence 578899999887666654221 222333333 44433332221110 123579999988877666644
No 243
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=31.52 E-value=3.3e+02 Score=25.56 Aligned_cols=61 Identities=7% Similarity=-0.018 Sum_probs=34.3
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEE-EEECCEEEEEecCC-eEEEEECCCCc
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG-VVCNGIFYVYSETE-KLAGYYIERGF 444 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~-vv~~g~lYv~GG~~-~i~~YD~~~~~ 444 (557)
.+++.|+.++ .+.+||..+.+-... +........+. ..-++.+.+.|+.+ .+..||+.+.+
T Consensus 167 ~~l~s~~~d~------~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 167 VTIISAGNDK------MVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp CEEEEEETTS------CEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred cEEEEEeCCC------EEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 4666666543 588889877543321 11111111222 23367777777664 88999988764
No 244
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=31.05 E-value=3.3e+02 Score=25.40 Aligned_cols=203 Identities=6% Similarity=-0.127 Sum_probs=95.5
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVL 268 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~ 268 (557)
+..||+.+.. ...++.|++ +.....+.... ....+++.. ++.||+.... ...+.
T Consensus 56 g~~l~~~d~~-----~~~i~~~~~-~g~~~~~~~~~---~~~~gl~~d~dG~l~v~~~~----------------~~~v~ 110 (305)
T 3dr2_A 56 QRTLVWSDLV-----GRRVLGWRE-DGTVDVLLDAT---AFTNGNAVDAQQRLVHCEHG----------------RRAIT 110 (305)
T ss_dssp GTEEEEEETT-----TTEEEEEET-TSCEEEEEESC---SCEEEEEECTTSCEEEEETT----------------TTEEE
T ss_pred CCEEEEEECC-----CCEEEEEeC-CCCEEEEeCCC---CccceeeECCCCCEEEEECC----------------CCEEE
Confidence 4457776532 246888888 45444333211 122334333 5778876421 13688
Q ss_pred EEecCCCcEEEcccCCc-Cc-ccceEEEEecCCCcccccccCCCCCCCCcEEEE----cccccccCC-----CCccccee
Q 035526 269 VFSPLTKSWWKVASMRY-AR-SMPILGISEVSPEFSIIPCHQSHQDRRFPRSRL----GGVSDVYED-----PHRLSLRR 337 (557)
Q Consensus 269 ~ydp~t~~W~~l~~m~~-~R-~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~----GG~~~~y~~-----~~~l~~v~ 337 (557)
+||+. ++.+.+..... .+ ..+...++.-+| .+|+. |-.. .+++ ......+.
T Consensus 111 ~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG----------------~l~~td~~~g~~~-~~~~~~~~~~~~~~~v~ 172 (305)
T 3dr2_A 111 RSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDG----------------AIWFTDPPFGLRK-PSQGCPADPELAHHSVY 172 (305)
T ss_dssp EECTT-SCEEEEECEETTEECSCCCCEEECTTS----------------CEEEECCSGGGSC-GGGSCCCCCSSSCEEEE
T ss_pred EECCC-CCEEEEEeccCCCccCCCCCEEECCCC----------------CEEEeCcCCCccc-cccccccccccCCCeEE
Confidence 99986 66666543211 11 111123333334 67764 3211 1111 11134566
Q ss_pred eccccCCcccccCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEE---ccCCCCCCc
Q 035526 338 QYRNSFDGFEGSLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWME---IQRLPVDFG 414 (557)
Q Consensus 338 ~yd~~~~~W~~~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~---v~~lp~~~~ 414 (557)
+||+.+.+.+... .......++.-.+ ...||+........ ....+.+||...+.... ....+....
T Consensus 173 ~~d~~~g~~~~~~-~~~~p~gl~~spd---------g~~lyv~~~~~~~~-~~~~i~~~~~~~~~l~~~~~~~~~~~~~p 241 (305)
T 3dr2_A 173 RLPPDGSPLQRMA-DLDHPNGLAFSPD---------EQTLYVSQTPEQGH-GSVEITAFAWRDGALHDRRHFASVPDGLP 241 (305)
T ss_dssp EECSSSCCCEEEE-EESSEEEEEECTT---------SSEEEEEECCC----CCCEEEEEEEETTEEEEEEEEECCSSSCC
T ss_pred EEcCCCCcEEEEe-cCCCCcceEEcCC---------CCEEEEEecCCcCC-CCCEEEEEEecCCCccCCeEEEECCCCCC
Confidence 7887666554321 1111122222211 11577765421100 12578899987654321 112211111
Q ss_pred CceEEEEECCEEEEEecCCeEEEEECCCCcEEec
Q 035526 415 VVSSGVVCNGIFYVYSETEKLAGYYIERGFWIGI 448 (557)
Q Consensus 415 ~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~W~~i 448 (557)
....+-.+|.||+.. .+.|.+||++...-..+
T Consensus 242 -dgi~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 242 -DGFCVDRGGWLWSSS-GTGVCVFDSDGQLLGHI 273 (305)
T ss_dssp -CSEEECTTSCEEECC-SSEEEEECTTSCEEEEE
T ss_pred -CeEEECCCCCEEEec-CCcEEEECCCCCEEEEE
Confidence 122233467888876 45799999976554444
No 245
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=30.76 E-value=23 Score=35.43 Aligned_cols=23 Identities=17% Similarity=0.219 Sum_probs=10.7
Q ss_pred ECCEEEEEecCCeEEEEECCCCc
Q 035526 422 CNGIFYVYSETEKLAGYYIERGF 444 (557)
Q Consensus 422 ~~g~lYv~GG~~~i~~YD~~~~~ 444 (557)
.++.||+-+....+.++|+++++
T Consensus 91 ~~~~v~~g~~dg~v~a~D~~tG~ 113 (369)
T 2hz6_A 91 SDGILYMGKKQDIWYVIDLLTGE 113 (369)
T ss_dssp ----CCCCEEEEEEEEECCC---
T ss_pred cCCEEEEEeCCCEEEEEECCCCc
Confidence 46666654444568888887654
No 246
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=30.26 E-value=3.6e+02 Score=25.62 Aligned_cols=61 Identities=13% Similarity=0.002 Sum_probs=35.7
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEcc--CCCCCCcCceEEEE--ECCEEEEEecC--CeEEEEECCCCcEE
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQ--RLPVDFGVVSSGVV--CNGIFYVYSET--EKLAGYYIERGFWI 446 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~--~lp~~~~~~~~~vv--~~g~lYv~GG~--~~i~~YD~~~~~W~ 446 (557)
+||+.... ...++++|+....=+.+. .+..+ ...++ .++.||+.... ..|++++++...=+
T Consensus 90 ~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~~~P----~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~ 156 (316)
T 1ijq_A 90 NIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKP----RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 156 (316)
T ss_dssp EEEEEETT------TTEEEEEETTSSSEEEEEECTTCCE----EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred eEEEEECC------CCEEEEEeCCCCceEEEEECCCCCc----ceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE
Confidence 77776532 246778887765433332 12221 22334 37899998742 58999998754433
No 247
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=28.49 E-value=4e+02 Score=25.55 Aligned_cols=22 Identities=14% Similarity=0.152 Sum_probs=15.3
Q ss_pred CCEEEEEecC-CeEEEEECCCCc
Q 035526 423 NGIFYVYSET-EKLAGYYIERGF 444 (557)
Q Consensus 423 ~g~lYv~GG~-~~i~~YD~~~~~ 444 (557)
+..||+.+.. +.+..|+.+.+.
T Consensus 321 g~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 321 DEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp TTEEEEECSSSCEEEEEEEETTE
T ss_pred CCEEEEEEcCCCeEEEEEEchhh
Confidence 5677777653 688888876653
No 248
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=28.18 E-value=2.6e+02 Score=26.68 Aligned_cols=65 Identities=11% Similarity=-0.105 Sum_probs=43.6
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCcEEeccC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGFWIGIQT 450 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~W~~i~~ 450 (557)
.+|+++..+ ..+.+||+.+++.+.+. ++. ...+.+..-+|.+|+.. .+.+..||+++++...+..
T Consensus 62 ~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~--~v~~i~~~~dg~l~v~~-~~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 62 TAWWFNILE------RELHELHLASGRKTVHA-LPF--MGSALAKISDSKQLIAS-DDGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEGGG------TEEEEEETTTTEEEEEE-CSS--CEEEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEEC
T ss_pred EEEEEECCC------CEEEEEECCCCcEEEEE-CCC--cceEEEEeCCCeEEEEE-CCCEEEEECCCCcEEEEee
Confidence 788876532 46899999988765543 232 11122344588988876 4579999999998876654
No 249
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=27.65 E-value=5.9e+02 Score=27.24 Aligned_cols=177 Identities=14% Similarity=0.107 Sum_probs=0.0
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCC--ceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQD--QWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRV 267 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~--~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v 267 (557)
+.+|++....... .++++.+|..+. .|..+...... .... +...++.||+....+.. ...+
T Consensus 245 g~~l~~~~~~~~~--~~~i~~~d~~~~~~~~~~l~~~~~~-~~~~-~~~~g~~l~~~t~~~~~-------------~~~l 307 (693)
T 3iuj_A 245 DRFLLISAANSTS--GNRLYVKDLSQENAPLLTVQGDLDA-DVSL-VDNKGSTLYLLTNRDAP-------------NRRL 307 (693)
T ss_dssp SCEEEEEEESSSS--CCEEEEEETTSTTCCCEEEECSSSS-CEEE-EEEETTEEEEEECTTCT-------------TCEE
T ss_pred CCEEEEEEccCCC--CcEEEEEECCCCCCceEEEeCCCCc-eEEE-EeccCCEEEEEECCCCC-------------CCEE
Q ss_pred EEEecCC---CcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCcEEEEcccccccCCCCcccceeeccccCC
Q 035526 268 LVFSPLT---KSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFPRSRLGGVSDVYEDPHRLSLRRQYRNSFD 344 (557)
Q Consensus 268 ~~ydp~t---~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~lyv~GG~~~~y~~~~~l~~v~~yd~~~~ 344 (557)
+.+|+.+ ..|+.+.+-..... .+...++
T Consensus 308 ~~~d~~~~~~~~~~~l~~~~~~~~----~~s~~g~--------------------------------------------- 338 (693)
T 3iuj_A 308 VTVDAANPGPAHWRDLIPERQQVL----TVHSGSG--------------------------------------------- 338 (693)
T ss_dssp EEEETTSCCGGGCEEEECCCSSCE----EEEEETT---------------------------------------------
T ss_pred EEEeCCCCCccccEEEecCCCCEE----EEEEECC---------------------------------------------
Q ss_pred cccccCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECC
Q 035526 345 GFEGSLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNG 424 (557)
Q Consensus 345 ~W~~~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g 424 (557)
.|++....++.. .+.++|......+.+.--........+..--++
T Consensus 339 -------------------------------~lv~~~~~~g~~----~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~ 383 (693)
T 3iuj_A 339 -------------------------------YLFAEYMVDATA----RVEQFDYEGKRVREVALPGLGSVSGFNGKHDDP 383 (693)
T ss_dssp -------------------------------EEEEEEEETTEE----EEEEECTTSCEEEEECCSSSSEEEECCCCTTCS
T ss_pred -------------------------------EEEEEEEECCee----EEEEEECCCCeeEEeecCCCceEEeeecCCCCC
Q ss_pred EEEEEecC----CeEEEEECCCCcEEeccCCCCCCcccccCCEEEEE
Q 035526 425 IFYVYSET----EKLAGYYIERGFWIGIQTSPFPPCVIEYYPKLVSW 467 (557)
Q Consensus 425 ~lYv~GG~----~~i~~YD~~~~~W~~i~~~p~p~~~~~~~~~lv~~ 467 (557)
.|++.... ..++.||+.++.++.+...+.+-....+...-+.+
T Consensus 384 ~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~ 430 (693)
T 3iuj_A 384 ALYFGFENYAQPPTLYRFEPKSGAISLYRASAAPFKPEDYVSEQRFY 430 (693)
T ss_dssp CEEEEEECSSSCCEEEEECTTTCCEEEEECCCSSCCGGGEEEEEEEE
T ss_pred EEEEEecCCCCCCEEEEEECCCCeEEEEEeCCCCcChhhCeeEEEEE
No 250
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=27.50 E-value=1.8e+02 Score=27.21 Aligned_cols=66 Identities=14% Similarity=0.063 Sum_probs=42.8
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCcEEeccCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGFWIGIQTS 451 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~W~~i~~~ 451 (557)
.||+++-. ...+.+||+.++.-+... ++.. ..+.+..-+|.||+.. .+.+..||+++++++.+...
T Consensus 26 ~l~~~d~~------~~~i~~~d~~~~~~~~~~-~~~~--~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 26 SLLFVDIP------AKKVCRWDSFTKQVQRVT-MDAP--VSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp EEEEEETT------TTEEEEEETTTCCEEEEE-CSSC--EEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEECC------CCEEEEEECCCCcEEEEe-CCCc--eEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEec
Confidence 78887753 357899999988765442 2211 1122223467777665 46899999999988876543
No 251
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=27.37 E-value=4.2e+02 Score=25.42 Aligned_cols=62 Identities=10% Similarity=-0.070 Sum_probs=39.5
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCEEEEEec-CCeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGIFYVYSE-TEKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG-~~~i~~YD~~~~~ 444 (557)
++||+.-. ....|+++|+....-+.+..- ........++.++.+|+..- ...|.++|+.++.
T Consensus 178 ~~lY~aD~------~~~~I~~~d~dG~~~~~~~~~--~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 178 QKLYWADA------KLNFIHKSNLDGTNRQAVVKG--SLPHPFALTLFEDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp TEEEEEET------TTTEEEEEETTSCSCEEEECS--CCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred CEEEEEEC------CCCEEEEEcCCCCceEEEecC--CCCCceEEEEeCCEEEEEecCCCeEEEEECCCCC
Confidence 48998864 346799999875443433221 11112234567899999863 4699999996654
No 252
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=26.78 E-value=3.9e+02 Score=24.84 Aligned_cols=69 Identities=7% Similarity=0.094 Sum_probs=36.4
Q ss_pred CeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEEE
Q 035526 191 PWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLV 269 (557)
Q Consensus 191 ~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ 269 (557)
+.+++.|+.+ ..+..||..+........+......-.+++.. ++..++.|+.++ .+.+
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg----------------~v~i 112 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK----------------TAKM 112 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS----------------EEEE
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC----------------cEEE
Confidence 3566666542 35788888763322211111111112233333 556666666432 6889
Q ss_pred EecCCCcEEEc
Q 035526 270 FSPLTKSWWKV 280 (557)
Q Consensus 270 ydp~t~~W~~l 280 (557)
||..+.+-..+
T Consensus 113 wd~~~~~~~~~ 123 (368)
T 3mmy_A 113 WDLSSNQAIQI 123 (368)
T ss_dssp EETTTTEEEEE
T ss_pred EEcCCCCceee
Confidence 99988876554
No 253
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=26.38 E-value=6.2e+02 Score=27.03 Aligned_cols=70 Identities=11% Similarity=-0.076 Sum_probs=42.2
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCC---cEEEccCCCCCCcCceEEEEE-CCEEEEEecC---CeEEEEECCCCc-EEe
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSN---KWMEIQRLPVDFGVVSSGVVC-NGIFYVYSET---EKLAGYYIERGF-WIG 447 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~---~W~~v~~lp~~~~~~~~~vv~-~g~lYv~GG~---~~i~~YD~~~~~-W~~ 447 (557)
.||+.+..+. ....+..+|..+. .|+.+.+-..... ....+.. ++.|++.... ..|..+|+.++. ...
T Consensus 299 ~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~ 374 (710)
T 2xdw_A 299 VFTFKTNRHS---PNYRLINIDFTDPEESKWKVLVPEHEKDV-LEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKI 374 (710)
T ss_dssp EEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCC---CCCEEEEEeCCCCCcccceeccCCCCCCe-EEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEe
Confidence 7777765432 3467899998875 5888754222111 2223445 7788877644 368899986554 344
Q ss_pred cc
Q 035526 448 IQ 449 (557)
Q Consensus 448 i~ 449 (557)
+.
T Consensus 375 l~ 376 (710)
T 2xdw_A 375 FP 376 (710)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 254
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=24.56 E-value=4.5e+02 Score=24.78 Aligned_cols=65 Identities=11% Similarity=-0.024 Sum_probs=37.6
Q ss_pred CeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEE-CCEEEEEcccCCCCCCccccCCcccccceEEE
Q 035526 191 PWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSI-MDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLV 269 (557)
Q Consensus 191 ~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~-~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ 269 (557)
+.+++.|+.+ ..+..||..+.+-..+...... ..-.+++.. ++.+++.|+.++ .+.+
T Consensus 139 ~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~~~~-~~i~~~~~~pdg~~lasg~~dg----------------~i~i 196 (343)
T 3lrv_A 139 TEYFIWADNR-----GTIGFQSYEDDSQYIVHSAKSD-VEYSSGVLHKDSLLLALYSPDG----------------ILDV 196 (343)
T ss_dssp CCEEEEEETT-----CCEEEEESSSSCEEEEECCCSS-CCCCEEEECTTSCEEEEECTTS----------------CEEE
T ss_pred CCEEEEEeCC-----CcEEEEECCCCcEEEEEecCCC-CceEEEEECCCCCEEEEEcCCC----------------EEEE
Confidence 3455555532 3588999888776443322211 112233333 567777777543 6889
Q ss_pred EecCCCcE
Q 035526 270 FSPLTKSW 277 (557)
Q Consensus 270 ydp~t~~W 277 (557)
||..+.+-
T Consensus 197 wd~~~~~~ 204 (343)
T 3lrv_A 197 YNLSSPDQ 204 (343)
T ss_dssp EESSCTTS
T ss_pred EECCCCCC
Confidence 99887753
No 255
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=23.91 E-value=4.2e+02 Score=26.69 Aligned_cols=23 Identities=22% Similarity=0.239 Sum_probs=18.5
Q ss_pred CCEEEEEe-cCCeEEEEECCCCcE
Q 035526 423 NGIFYVYS-ETEKLAGYYIERGFW 445 (557)
Q Consensus 423 ~g~lYv~G-G~~~i~~YD~~~~~W 445 (557)
++.||+.. +.+.|.+||+.+..-
T Consensus 237 ~g~lyv~d~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 237 NGELYFNSWNAGQVFRYDFTTQET 260 (430)
T ss_dssp TCCEEEEETTTTEEEEEETTTTEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcE
Confidence 68899976 456999999987764
No 256
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=23.77 E-value=4.4e+02 Score=24.36 Aligned_cols=60 Identities=7% Similarity=-0.048 Sum_probs=32.9
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCC---c----EEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSN---K----WMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIER 442 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~---~----W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~ 442 (557)
.+++.|+.+ ..+.+||..+. . .+.+..+..... ..+.+...+.+++.+....+..||+.+
T Consensus 113 ~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~l~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 113 DKLIAASWD------GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNK-IFTMDTNSSRLIVGMNNSQVQWFRLPL 179 (342)
T ss_dssp TEEEEEETT------SEEEEECHHHHTTBCEEEEESCSSSSSSCCC-EEEEEECSSEEEEEESTTEEEEEESSC
T ss_pred CEEEEEcCC------CeEEEEcccccccccccccCCeeeEEeeCCc-eEEEEecCCcEEEEeCCCeEEEEECCc
Confidence 566666644 35788887640 0 223333332222 233345566655444445999999987
No 257
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=23.71 E-value=4.1e+02 Score=24.06 Aligned_cols=58 Identities=17% Similarity=0.106 Sum_probs=38.5
Q ss_pred eEEEEEcccCCCCCCCceEEEEeCCCCcEEE-----c----cCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCc
Q 035526 375 FVLIAVGGLGSWDEPLDSGEIYDSVSNKWME-----I----QRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGF 444 (557)
Q Consensus 375 ~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~-----v----~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~ 444 (557)
+++|++-| +..++||..+++=.. + ..+|. ...++...+|.+|++-|. ..++||..+.+
T Consensus 128 gk~yfFkG--------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~---~iDaAf~~~g~~YfFkg~-~y~rf~~~~~~ 194 (207)
T 1pex_A 128 GKTLLFSG--------NQVWRYDDTNHIMDKDYPRLIEEDFPGIGD---KVDAVYEKNGYIYFFNGP-IQFEYSIWSNR 194 (207)
T ss_dssp SEEEEEET--------TEEEEEETTTTEECSSCCCBHHHHSTTSCS---CCSEEEEETTEEEEEETT-EEEEEETTTTE
T ss_pred CEEEEEeC--------CEEEEEeCcCccccCCCCccHHHcCCCCCC---CccEEEEcCCcEEEEECC-EEEEEeCCccE
Confidence 59999987 367889887653110 1 12232 123445579999999886 88999987765
No 258
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=22.65 E-value=6.4e+02 Score=25.93 Aligned_cols=43 Identities=5% Similarity=0.012 Sum_probs=29.2
Q ss_pred ceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEEEecCCCcEEEcc
Q 035526 229 RFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLVFSPLTKSWWKVA 281 (557)
Q Consensus 229 R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ydp~t~~W~~l~ 281 (557)
-..-++-..++.||++--..... +.-+.+.+.+-.-..|..+.
T Consensus 339 AsEPCvkyYdgvLyLtTRgt~~~----------~~GS~L~rs~d~Gq~w~slr 381 (670)
T 3ju4_A 339 ASEPCIKYYDGVLYLITRGTRGD----------RLGSSLHRSRDIGQTWESLR 381 (670)
T ss_dssp EEEEEEEEETTEEEEEEEESCTT----------SCCCEEEEESSTTSSCEEEE
T ss_pred cccchhhhhCCEEEEEecCcCCC----------CCcceeeeecccCCchhhee
Confidence 34556778899999985432221 23457888888888998763
No 259
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=22.57 E-value=4.9e+02 Score=24.53 Aligned_cols=191 Identities=7% Similarity=-0.064 Sum_probs=0.0
Q ss_pred CCeEEEEeeecCCcccceEEEeeCCCCceEEccCCCcCcceeeEEEEECCEEEEEcccCCCCCCccccCCcccccceEEE
Q 035526 190 NPWLFLFGAVKDGYYSGEIHALDVSQDQWHRIDASILKGRFMFSVVSIMDDVYVVGGCSSLTSFGRVDGSSFKTHKRVLV 269 (557)
Q Consensus 190 ~~~L~v~GG~~~~~~~~~v~~yd~~~~~W~~l~~~p~~~R~~~s~a~~~~~IYViGG~~~~~~~~~~~~~~~~~~~~v~~ 269 (557)
++.+++.|+.+ ..+..+|..+.+....-.-... .........++..++.||.++ .+.+
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~h~~-~v~~v~~sp~~~~l~s~~~d~----------------~i~~ 144 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKRFVGHQS-EVYSVAFSPDNRQILSAGAER----------------EIKL 144 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEEEECCCS-CEEEEEECSSTTEEEEEETTS----------------CEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEEEcCCCC-cEEEEEECCCCCEEEEEcCCC----------------EEEE
Q ss_pred EecCCCcEEEcccCCcCcccceEEEEecCCCcccccccCCCCCCCCc----------EEEEcccccccCCCCcccceeec
Q 035526 270 FSPLTKSWWKVASMRYARSMPILGISEVSPEFSIIPCHQSHQDRRFP----------RSRLGGVSDVYEDPHRLSLRRQY 339 (557)
Q Consensus 270 ydp~t~~W~~l~~m~~~R~~~~~~v~~~~g~~~~~~~~~~~~~~r~~----------lyv~GG~~~~y~~~~~l~~v~~y 339 (557)
||.....-.................+...+ . .++.|+.+ ..+..|
T Consensus 145 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------------~~~~~~~~~~~~l~s~~~d---------~~i~iw 199 (343)
T 2xzm_R 145 WNILGECKFSSAEKENHSDWVSCVRYSPIM----------------KSANKVQPFAPYFASVGWD---------GRLKVW 199 (343)
T ss_dssp EESSSCEEEECCTTTSCSSCEEEEEECCCC----------------CSCSCCCSSCCEEEEEETT---------SEEEEE
T ss_pred EeccCCceeeeecccCCCceeeeeeecccc----------------ccccccCCCCCEEEEEcCC---------CEEEEE
Q ss_pred cccCCcccccCCCCCCCceEEEeccchhhhhhccceEEEEEcccCCCCCCCceEEEEeCCCCcEEEccCCCCCCcCceEE
Q 035526 340 RNSFDGFEGSLLPNRKSYKFIRQKSDQSIAKASKRFVLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSG 419 (557)
Q Consensus 340 d~~~~~W~~~~~~~r~~~~~~~~~~d~~~~~~~~~~~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~ 419 (557)
|.....-.........-.+++...+ ++.++.|+.++. +.+||..+.. .....+.........+
T Consensus 200 d~~~~~~~~~~~h~~~v~~~~~s~~----------g~~l~sgs~dg~------v~iwd~~~~~-~~~~~~~~~~~v~~v~ 262 (343)
T 2xzm_R 200 NTNFQIRYTFKAHESNVNHLSISPN----------GKYIATGGKDKK------LLIWDILNLT-YPQREFDAGSTINQIA 262 (343)
T ss_dssp ETTTEEEEEEECCSSCEEEEEECTT----------SSEEEEEETTCE------EEEEESSCCS-SCSEEEECSSCEEEEE
T ss_pred cCCCceeEEEcCccccceEEEECCC----------CCEEEEEcCCCe------EEEEECCCCc-ccceeecCCCcEEEEE
Q ss_pred EEECCEEEEEecCCeEEEEECCCCc
Q 035526 420 VVCNGIFYVYSETEKLAGYYIERGF 444 (557)
Q Consensus 420 vv~~g~lYv~GG~~~i~~YD~~~~~ 444 (557)
..-++.+...|..+.+..||..+..
T Consensus 263 ~sp~~~~la~~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 263 FNPKLQWVAVGTDQGVKIFNLMTQS 287 (343)
T ss_dssp ECSSSCEEEEEESSCEEEEESSSCC
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCC
No 260
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=22.27 E-value=5.5e+02 Score=25.02 Aligned_cols=72 Identities=14% Similarity=0.060 Sum_probs=42.9
Q ss_pred EEEEEcccCCCCCCCceEEEEeCCCCcEEEccC---CCCCC------c--CceEEEEE----CCEEEEEecCCeEEEEEC
Q 035526 376 VLIAVGGLGSWDEPLDSGEIYDSVSNKWMEIQR---LPVDF------G--VVSSGVVC----NGIFYVYSETEKLAGYYI 440 (557)
Q Consensus 376 ~iyviGG~~~~~~~l~~ve~YD~~t~~W~~v~~---lp~~~------~--~~~~~vv~----~g~lYv~GG~~~i~~YD~ 440 (557)
.||+.+..+.. -..+.+++....+|+.+.. ++... . ...+.++. .+.||+.+....|++.+-
T Consensus 69 ~l~~g~~~g~~---g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D 145 (394)
T 3b7f_A 69 RMLMAARTGHL---GPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD 145 (394)
T ss_dssp CEEEEEEC--C---CEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS
T ss_pred eEEEEecCCCC---CccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC
Confidence 56665532111 1246667667788998853 22111 0 11122332 578998876678999988
Q ss_pred CCCcEEeccC
Q 035526 441 ERGFWIGIQT 450 (557)
Q Consensus 441 ~~~~W~~i~~ 450 (557)
...+|+.+..
T Consensus 146 gG~tW~~~~~ 155 (394)
T 3b7f_A 146 HGASWEPVAG 155 (394)
T ss_dssp TTSBCEECHH
T ss_pred CCCCeEECcC
Confidence 8899998754
No 261
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=22.13 E-value=1.6e+02 Score=29.35 Aligned_cols=67 Identities=16% Similarity=0.086 Sum_probs=39.8
Q ss_pred EEEEEcccCCC---CCCCceEEEEeCCCCcEEEccCCCCCCcCceEEEEECCE--EEEEe-cCCeEEEEECCCCc
Q 035526 376 VLIAVGGLGSW---DEPLDSGEIYDSVSNKWMEIQRLPVDFGVVSSGVVCNGI--FYVYS-ETEKLAGYYIERGF 444 (557)
Q Consensus 376 ~iyviGG~~~~---~~~l~~ve~YD~~t~~W~~v~~lp~~~~~~~~~vv~~g~--lYv~G-G~~~i~~YD~~~~~ 444 (557)
++|+....... ...-+.+.++|..+.+= +..++.+....+....-+|+ +|+.. +.+.+.+||+++.+
T Consensus 280 ~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 280 GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred EEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 88887542111 11346899999987644 33333332222333444554 67666 46899999998765
No 262
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=20.94 E-value=3.5e+02 Score=28.87 Aligned_cols=58 Identities=10% Similarity=0.028 Sum_probs=34.8
Q ss_pred ceEEEEeCCCC---cEEEccCCCCCCcCceEEEEECCEEEEEecCCeEEEEECCCCcEEeccC
Q 035526 391 DSGEIYDSVSN---KWMEIQRLPVDFGVVSSGVVCNGIFYVYSETEKLAGYYIERGFWIGIQT 450 (557)
Q Consensus 391 ~~ve~YD~~t~---~W~~v~~lp~~~~~~~~~vv~~g~lYv~GG~~~i~~YD~~~~~W~~i~~ 450 (557)
..++++|..++ .-+.+..... ........-+|+..+++..+.|..+|+.++....+..
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~~--~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGEG--FATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSSS--CEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCC
T ss_pred CcEEEEECCCCCcceEEEcccCCc--ccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEecc
Confidence 57899998876 4433322111 1112223346765555556689999999887766543
Done!