Query         035527
Match_columns 522
No_of_seqs    182 out of 1910
Neff          10.7
Searched_HMMs 46136
Date          Fri Mar 29 03:44:59 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035527.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035527hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0   6E-84 1.3E-88  630.5  47.1  459   29-522    25-488 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0 3.6E-78 7.8E-83  611.5  47.9  468   27-522    25-499 (499)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 7.1E-78 1.5E-82  578.1  42.1  457   28-522    29-499 (499)
  4 PLN02971 tryptophan N-hydroxyl 100.0 1.5E-76 3.3E-81  601.9  46.0  465   27-521    54-533 (543)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 5.4E-76 1.2E-80  596.1  47.4  466   27-521    31-508 (517)
  6 PLN02966 cytochrome P450 83A1  100.0 8.8E-76 1.9E-80  593.0  47.4  472   21-520    20-498 (502)
  7 PLN00110 flavonoid 3',5'-hydro 100.0 1.5E-75 3.3E-80  589.2  47.6  486    4-521     4-496 (504)
  8 PLN03112 cytochrome P450 famil 100.0 4.1E-75 8.8E-80  590.9  48.7  486    8-521    10-507 (514)
  9 PLN02183 ferulate 5-hydroxylas 100.0 1.9E-75 4.1E-80  592.0  45.9  460   27-521    33-511 (516)
 10 PTZ00404 cytochrome P450; Prov 100.0 1.3E-73 2.8E-78  575.7  46.6  452   26-521    25-482 (482)
 11 PLN02394 trans-cinnamate 4-mon 100.0 4.6E-73   1E-77  574.8  47.4  467   25-522    25-502 (503)
 12 PLN00168 Cytochrome P450; Prov 100.0 1.4E-72 3.1E-77  571.4  47.2  462   27-521    32-516 (519)
 13 KOG0157 Cytochrome P450 CYP4/C 100.0 5.2E-73 1.1E-77  565.8  34.3  451   28-522    33-496 (497)
 14 PLN02655 ent-kaurene oxidase   100.0   6E-72 1.3E-76  559.7  42.1  455   32-522     1-464 (466)
 15 PLN02290 cytokinin trans-hydro 100.0 2.7E-72 5.9E-77  570.5  38.7  449   28-521    40-514 (516)
 16 PLN02500 cytochrome P450 90B1  100.0 1.6E-71 3.5E-76  560.7  40.5  438   24-520    32-488 (490)
 17 PLN03018 homomethionine N-hydr 100.0 2.6E-70 5.7E-75  551.9  48.6  464   28-521    38-523 (534)
 18 PLN02774 brassinosteroid-6-oxi 100.0 2.1E-70 4.6E-75  548.1  39.7  446   11-520    12-462 (463)
 19 PF00067 p450:  Cytochrome P450 100.0 1.2E-71 2.5E-76  563.1  28.4  453   32-518     1-463 (463)
 20 KOG0159 Cytochrome P450 CYP11/ 100.0 2.2E-70 4.8E-75  513.3  33.7  454   28-521    48-517 (519)
 21 KOG0684 Cytochrome P450 [Secon 100.0 9.8E-70 2.1E-74  495.9  34.0  444   30-522    31-485 (486)
 22 PLN02169 fatty acid (omega-1)- 100.0 2.8E-69   6E-74  542.6  40.1  449   31-522    32-500 (500)
 23 PLN03195 fatty acid omega-hydr 100.0 1.1E-69 2.5E-74  550.8  37.0  453   31-521    31-515 (516)
 24 PLN02196 abscisic acid 8'-hydr 100.0   4E-69 8.7E-74  538.4  38.8  443   11-521    16-462 (463)
 25 PLN02738 carotene beta-ring hy 100.0 6.1E-69 1.3E-73  547.5  39.2  441   42-522   143-595 (633)
 26 PLN02987 Cytochrome P450, fami 100.0 2.1E-68 4.5E-73  531.2  41.7  461    1-522     1-469 (472)
 27 PLN03141 3-epi-6-deoxocathaste 100.0 1.5E-67 3.2E-72  526.4  38.1  432   27-521     4-449 (452)
 28 PLN02302 ent-kaurenoic acid ox 100.0 4.9E-67 1.1E-71  530.5  41.8  437   26-521    38-487 (490)
 29 PLN02936 epsilon-ring hydroxyl 100.0 1.2E-66 2.7E-71  523.6  36.6  451   30-522    12-482 (489)
 30 PLN02426 cytochrome P450, fami 100.0 3.2E-64   7E-69  505.0  41.1  443   38-522    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 3.3E-57 7.2E-62  447.1  30.5  410   28-493    15-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0   2E-52 4.4E-57  408.6  33.9  382   52-521    24-410 (411)
 33 PF12554 MOZART1:  Mitotic-spin  49.3      41 0.00089   21.5   3.8   42  316-357     6-48  (48)
 34 PF05952 ComX:  Bacillus compet  48.9      17 0.00036   24.1   2.1   18  338-355     5-22  (57)
 35 PHA03049 IMV membrane protein;  48.1      45 0.00097   22.7   4.0   22    4-25      6-27  (68)
 36 KOG0114 Predicted RNA-binding   46.7      90  0.0019   23.7   5.8   62   27-91      9-76  (124)
 37 PF05393 Hum_adeno_E3A:  Human   46.3      42 0.00091   24.3   3.9   23    1-23     35-57  (94)
 38 KOG0159 Cytochrome P450 CYP11/  46.1 3.1E+02  0.0067   27.9  11.2   15  376-390   349-363 (519)
 39 PRK06789 flagellar motor switc  38.0      39 0.00083   23.9   2.7   39  380-418    21-62  (74)
 40 PF01102 Glycophorin_A:  Glycop  36.4      47   0.001   26.2   3.3    9   16-24     84-92  (122)
 41 PF05961 Chordopox_A13L:  Chord  35.9      87  0.0019   21.5   4.0   20    5-24      7-26  (68)
 42 KOG4189 Uncharacterized conser  34.2 1.7E+02  0.0036   25.1   6.3   49  311-359   127-178 (209)
 43 PRK14750 kdpF potassium-transp  33.6      88  0.0019   17.3   3.2   22    1-22      1-22  (29)
 44 PF12508 DUF3714:  Protein of u  32.9      35 0.00077   29.6   2.3   44  373-417    51-94  (200)
 45 KOG3653 Transforming growth fa  32.0 1.7E+02  0.0036   29.3   6.8   37   60-96    220-256 (534)
 46 PF08776 VASP_tetra:  VASP tetr  31.4 1.1E+02  0.0023   18.6   3.4   29  346-387    10-38  (40)
 47 PF15330 SIT:  SHP2-interacting  30.8   1E+02  0.0022   23.8   4.2   10   38-47     46-55  (107)
 48 COG0851 MinE Septum formation   30.7   1E+02  0.0023   22.5   4.0   18  345-362    35-52  (88)
 49 PF07886 BA14K:  BA14K-like pro  30.2      45 0.00097   19.0   1.7   16  450-465    16-31  (31)
 50 PF09201 SRX:  SRX;  InterPro:   28.4      57  0.0012   26.1   2.5   22  463-484    19-40  (148)
 51 COG1707 ACT domain-containing   28.3      65  0.0014   26.7   2.9   38   49-86    153-195 (218)
 52 PF14459 Prok-E2_C:  Prokaryoti  28.2      29 0.00063   26.2   0.9   18  450-467   103-120 (131)
 53 PF14483 Cut8_M:  Cut8 dimerisa  23.8 1.2E+02  0.0027   18.2   2.9   19  336-354    16-35  (38)
 54 PF13893 RRM_5:  RNA recognitio  23.5 2.1E+02  0.0046   18.3   4.7   35   57-91      2-40  (56)
 55 KOG3506 40S ribosomal protein   23.4      37  0.0008   22.1   0.6   11  455-465    12-22  (56)
 56 PF12444 Sox_N:  Sox developmen  22.3      54  0.0012   23.8   1.3   20  473-492    61-80  (84)
 57 PF08138 Sex_peptide:  Sex pept  22.0      43 0.00093   21.6   0.7   25   12-36     13-37  (56)
 58 PF14129 DUF4296:  Domain of un  21.7 3.3E+02  0.0071   19.9   7.1   49  313-361    30-79  (87)
 59 PRK05933 type III secretion sy  21.2      89  0.0019   29.2   2.8   43  377-419   317-363 (372)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6e-84  Score=630.50  Aligned_cols=459  Identities=42%  Similarity=0.727  Sum_probs=405.6

Q ss_pred             CCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCC-Cccccc
Q 035527           29 AKLPPGPPGLPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPA-LSGTQK  107 (522)
Q Consensus        29 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~-~~~~~~  107 (522)
                      .+.||||+++|++||++++....++.++.++.++|||||.+++|..++|||+|++.+++++.+++..|.+|+. ......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            8899999999999999999444599999999999999999999999999999999999999999999999997 234466


Q ss_pred             cccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhccccccccc
Q 035527          108 LSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAADDY  187 (522)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  187 (522)
                      +.+++.++.++++|+.|+.+||.....+++...++++.....++++                 .+++.+.+.        
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~-----------------~l~~~l~~~--------  159 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVD-----------------ELVKKLSKS--------  159 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHH-----------------HHHHHHHhc--------
Confidence            6767889999999999999999999999999999999888888888                 888888762        


Q ss_pred             ccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhcccccccccc-ccchhhhhhhhhHHHHH
Q 035527          188 VSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCLP-FVGCWLDSLTGWNRRLR  266 (522)
Q Consensus       188 ~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~  266 (522)
                      ..+ +++|+...+..++.++|++++||.++...+.+...++.+.+.+.....+.....+++| ++. |+++..+..++..
T Consensus       160 ~~~-~~vdl~~~l~~~~~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~-~~~~~~g~~~~~~  237 (489)
T KOG0156|consen  160 KKG-EPVDLSELLDLLVGNVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLR-WLDGISGLEKRLK  237 (489)
T ss_pred             CCC-ceeeHHHHHHHHHHHHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHH-hcccccHHHHHHH
Confidence            223 8999999999999999999999999987644546678999999999999888999999 555 6655456677777


Q ss_pred             hhhhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhccccCCc-cChHHHHHHHHH-HHhhccchHHHHHHHHHHHhh
Q 035527          267 NNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKIADDH-QTFDSIKSTIME-NIAAMDTIKVTLEWAMTNLMK  344 (522)
Q Consensus       267 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~-~~~~~i~~~~~~-~~ag~~tt~~~l~~~l~~L~~  344 (522)
                      ....++.++++..|+++.+.. ..++ ..|+++.+++...+...+ ++++++...+.+ ++||+|||++|+.|++.+|++
T Consensus       238 ~~~~~~~~~~~~~i~eh~~~~-~~~~-~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~  315 (489)
T KOG0156|consen  238 KVSKRLDEFLERIIDEHREKI-GDEE-GRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLN  315 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHhhh-ccCC-CCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHh
Confidence            777789999999999997764 2122 489999999887754433 899999999999 999999999999999999999


Q ss_pred             CcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCC-CCcccccccceeecEEeCCCcEEEEechhhc
Q 035527          345 NPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQ-FLPRETTERCVIDGYHIPAKTTVFVNVLAIG  423 (522)
Q Consensus       345 ~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~  423 (522)
                      ||++|+|+|+||+++++.++.++.+|+.+||||+|||+|++|+||++| .++|.+.+|+.++||.|||||.|+++.|++|
T Consensus       316 ~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~  395 (489)
T KOG0156|consen  316 NPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIH  395 (489)
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhh
Confidence            999999999999999998888999999999999999999999999999 8899999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCCCCCCCCCCCC
Q 035527          424 RDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGMEIDDLDYDAN  503 (522)
Q Consensus       424 ~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  503 (522)
                      +||++|+||++|+||||++.+ +.+.....++|||.|+|.|||..+|.+++.+++|.|+++|||+++++    ++++...
T Consensus       396 rDp~vw~dP~eF~PERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~  470 (489)
T KOG0156|consen  396 RDPKVWEDPEEFKPERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEA  470 (489)
T ss_pred             cCCccCCCccccChhhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCccc
Confidence            999999999999999999975 23336789999999999999999999999999999999999999876    3344444


Q ss_pred             CcceecccCCeeeEeeecC
Q 035527          504 PGFTQHKKNPLRLAATKFI  522 (522)
Q Consensus       504 ~~~~~~~~~~~~~~~~~r~  522 (522)
                       ++++..+.|+.+...+|.
T Consensus       471 -~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  471 -GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             -ccceecCCcceeeeecCC
Confidence             377777778888777663


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=3.6e-78  Score=611.50  Aligned_cols=468  Identities=44%  Similarity=0.790  Sum_probs=384.5

Q ss_pred             cCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCcccc
Q 035527           27 TRAKLPPGPPGLPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGTQ  106 (522)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~  106 (522)
                      ++.+.||||+++|++||++++...++..++.+++++||++|++++|+.++++++||+++++|+.++...|..++......
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            55678999999999999998844467788999999999999999999999999999999999998877888777544332


Q ss_pred             ccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccccc
Q 035527          107 KLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAADD  186 (522)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  186 (522)
                      .....+....+...++.|+.+|+.+..++|+..++..+.+.+.++++                 ++++.+...       
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~-----------------~ll~~l~~~-------  160 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQ-----------------RMMDKIYKA-------  160 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHH-----------------HHHHHHHHh-------
Confidence            22222233344566789999999866789999999999999999999                 999999754       


Q ss_pred             cccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccccccccccccchhhhhhhhhHHHHH
Q 035527          187 YVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNRRLR  266 (522)
Q Consensus       187 ~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~  266 (522)
                       ..+++++|+.+.+..+++++++.++||.+++....+ ...+.+.+.+.............+|++. ++..+.+..++..
T Consensus       161 -~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~l~~~~~~~~  237 (499)
T PLN03234        161 -ADQSGTVDLSELLLSFTNCVVCRQAFGKRYNEYGTE-MKRFIDILYETQALLGTLFFSDLFPYFG-FLDNLTGLSARLK  237 (499)
T ss_pred             -ccCCCeEEHHHHHHHHHHHHHHHHHhCCcccccchh-HHHHHHHHHHHHHHcCCCcHHHHhhHHH-HhhhhhhHHHHHH
Confidence             345678999999999999999999999988754333 4555565555444333333334455543 3333334456677


Q ss_pred             hhhhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhccccC--CccChHHHHHHHHH-HHhhccchHHHHHHHHHHHh
Q 035527          267 NNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKIAD--DHQTFDSIKSTIME-NIAAMDTIKVTLEWAMTNLM  343 (522)
Q Consensus       267 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~--~~~~~~~i~~~~~~-~~ag~~tt~~~l~~~l~~L~  343 (522)
                      ++.+.+.+++.++|+++.+....+.+ ..|+++.+++...+.+  ..++++++.+++.+ ++||+|||+++++|++|+|+
T Consensus       238 ~~~~~~~~~~~~~i~~~~~~~~~~~~-~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~  316 (499)
T PLN03234        238 KAFKELDTYLQELLDETLDPNRPKQE-TESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLI  316 (499)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCC-cccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Confidence            88899999999999987654322222 5789999987654322  25899999999999 99999999999999999999


Q ss_pred             hCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCCC-CcccccccceeecEEeCCCcEEEEechhh
Q 035527          344 KNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAI  422 (522)
Q Consensus       344 ~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~-~~R~~~~d~~~~g~~ip~G~~v~~~~~~~  422 (522)
                      +||++|+++|+|++++.++.+.++++++.+|||++|||+|+||++|+++. ++|.+.+|++++||.||||+.|.++++.+
T Consensus       317 ~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~  396 (499)
T PLN03234        317 KYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAV  396 (499)
T ss_pred             hCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhh
Confidence            99999999999999999877778999999999999999999999999995 58999999999999999999999999999


Q ss_pred             ccCCCCC-CCCCCCCCCcccCCCCC--CCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCCCCCCCC
Q 035527          423 GRDGQVW-DKPDEFIPERFVGSNID--MGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGMEIDDLD  499 (522)
Q Consensus       423 ~~d~~~~-~dp~~F~P~R~l~~~~~--~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~  499 (522)
                      ||||++| +||++||||||+++...  .+..+..|+|||+|+|+|+|+++|++|+++++|.|+++|+|++.++.++.++.
T Consensus       397 ~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~  476 (499)
T PLN03234        397 SRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIK  476 (499)
T ss_pred             hCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCC
Confidence            9999999 89999999999975432  22346789999999999999999999999999999999999998764444556


Q ss_pred             CCCCCcceecccCCeeeEeeecC
Q 035527          500 YDANPGFTQHKKNPLRLAATKFI  522 (522)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~r~  522 (522)
                      .....+++.+|++++++.+++||
T Consensus       477 ~~~~~~~~~~~~~~~~~~~~~~~  499 (499)
T PLN03234        477 MDVMTGLAMHKKEHLVLAPTKHI  499 (499)
T ss_pred             cccccccccccCCCeEEEeecCC
Confidence            67778899899999999999986


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.1e-78  Score=578.07  Aligned_cols=457  Identities=24%  Similarity=0.322  Sum_probs=363.1

Q ss_pred             CCCCCCCCCCCcccccccCCCC-CChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCcccc
Q 035527           28 RAKLPPGPPGLPLIGNLHQLDA-TNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGTQ  106 (522)
Q Consensus        28 ~~~~ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~  106 (522)
                      .++..|+|+++|++||+..+.. ..+.....+.+.++|+++.++.+.+|.++|+|||++++|+.++..+|.++.......
T Consensus        29 ~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d  108 (499)
T KOG0158|consen   29 RRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGD  108 (499)
T ss_pred             ccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCC
Confidence            4457899999999999988742 223455555555569999999999999999999999999999999999854211111


Q ss_pred             ccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccccc
Q 035527          107 KLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAADD  186 (522)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  186 (522)
                      .........++...|++||++|..+ +|.|++.+++.+.+.+++.+.                 ++++.+..+       
T Consensus       109 ~~~~l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~-----------------~l~~~l~~~-------  163 (499)
T KOG0158|consen  109 PEDPLSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGD-----------------ELVRHLRRK-------  163 (499)
T ss_pred             CCCcccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHH-----------------HHHHHHHHh-------
Confidence            1111122566677899999999998 999999999999999999999                 999999986       


Q ss_pred             cccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhcccc-----ccccccccchhhhhhhhh
Q 035527          187 YVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVF-----FRDCLPFVGCWLDSLTGW  261 (522)
Q Consensus       187 ~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~p~l~~~~~~~~~~  261 (522)
                       ...+..+++.+.+..++.|+|+.++||.+.+...+. ...+...-...........     ....+|.+...+    ..
T Consensus       164 -~~~~~~~~~~dl~~~yT~DVI~~~AfG~~~~s~~d~-~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l----~~  237 (499)
T KOG0158|consen  164 -SEGGQEGEIKDLCARYTTDVIGSCAFGLDANSLRDP-KAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL----RV  237 (499)
T ss_pred             -hcccCCccHHHHHHHHHHHHHhHhhcccchhhhcCc-hHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh----hc
Confidence             232367899999999999999999999998876544 3444443333333211111     111223222111    11


Q ss_pred             HHHHHhhhhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhccc--cC---C-ccChHHHHHHHHH-HHhhccchHHH
Q 035527          262 NRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKI--AD---D-HQTFDSIKSTIME-NIAAMDTIKVT  334 (522)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~--~~---~-~~~~~~i~~~~~~-~~ag~~tt~~~  334 (522)
                      ........+.+.+.+.+.++.|.++    .....|+++.+++....  .+   . .++.++++++++. ++||.||||++
T Consensus       238 ~~~~~~~~~~~~~~v~~~v~~R~~~----~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~t  313 (499)
T KOG0158|consen  238 KLFPEDVTDFFRKLVNSRVEQREKE----NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTAST  313 (499)
T ss_pred             ccChHHHHHHHHHHHHHHHHHHHhc----CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHH
Confidence            1222344455566666666666222    23378999999988753  11   2 5999999999999 99999999999


Q ss_pred             HHHHHHHHhhCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCCCCcccccccceee-cEEeCCCc
Q 035527          335 LEWAMTNLMKNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCVID-GYHIPAKT  413 (522)
Q Consensus       335 l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~~-g~~ip~G~  413 (522)
                      +++++|+|++||++|+|||+||+++..+...+++|.+.+|+||++||+||||+||+++.+.|.+++|++++ ++.||||+
T Consensus       314 lsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~  393 (499)
T KOG0158|consen  314 LSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGT  393 (499)
T ss_pred             HHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCC
Confidence            99999999999999999999999997765559999999999999999999999999999999999999999 99999999


Q ss_pred             EEEEechhhccCCCCCCCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCC
Q 035527          414 TVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGM  493 (522)
Q Consensus       414 ~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~  493 (522)
                      .|.++++++||||++||||++|+||||.+.+.+ ..+++.|+|||.|||.|+|++||.+|+|+.|++||++|+++.++ .
T Consensus       394 ~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~-~  471 (499)
T KOG0158|consen  394 PVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP-T  471 (499)
T ss_pred             EEEeecccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC-c
Confidence            999999999999999999999999999987644 55789999999999999999999999999999999999999988 4


Q ss_pred             CCCCCCCCCCCcceecccCCeeeEeeecC
Q 035527          494 EIDDLDYDANPGFTQHKKNPLRLAATKFI  522 (522)
Q Consensus       494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  522 (522)
                      +..+ ......++++.|++++.+++++|.
T Consensus       472 t~~~-~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  472 TIIP-LEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             ccCc-ccCCccceeeecCCceEEEEEeCC
Confidence            3333 222233788999999999999984


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.5e-76  Score=601.93  Aligned_cols=465  Identities=27%  Similarity=0.464  Sum_probs=364.7

Q ss_pred             cCCCCCCCCCCCcccccccCCCCCC-hhHHHHHHHHhhC-CeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCcc
Q 035527           27 TRAKLPPGPPGLPLIGNLHQLDATN-LAFCFWKLSKQYG-PIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSG  104 (522)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~~~~-~~~~~~~~~~kyG-~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~  104 (522)
                      ++.+.||||+++|++||++.+..+. .+..+.++.++|| +||++++|+.++++|+||+++++++.+++..|.+++....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            4557899999999999998874332 3567889999999 8999999999999999999999999998888888875433


Q ss_pred             ccccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccc
Q 035527          105 TQKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAA  184 (522)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  184 (522)
                      ...+..+..+.++..+|+.|+++||.+....++......+.+.+.+++.                 .+++.+...     
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~-----------------~l~~~l~~~-----  191 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETD-----------------HLTAWLYNM-----  191 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH-----------------HHHHHHHHh-----
Confidence            3222222234577788999999999997778888778888888888887                 787777653     


Q ss_pred             cccccCCCccchHHHHHHHHHHHHHHHhcCccccccc----hhHHHhHHHHHHHHHHhhcc---ccccccccccchhhhh
Q 035527          185 DDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEG----TAAVSRLHSVFAETQAMVGR---VFFRDCLPFVGCWLDS  257 (522)
Q Consensus       185 ~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~l~~~~~~  257 (522)
                         ...++++|+.+.+..+++++++.++||.++....    ++...+..+.+...+.....   ..+.+.+|++. +++ 
T Consensus       192 ---~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~-~~~-  266 (543)
T PLN02971        192 ---VKNSEPVDLRFVTRHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLT-GLD-  266 (543)
T ss_pred             ---ccCCCceehHHHHHHHHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchh-hhc-
Confidence               2345689999999999999999999999863211    01012233333333322211   12334556544 221 


Q ss_pred             hhhhHHHHHhhhhhHHHHHHHHHHhhcCCCCCC-ccccccHHHHHHHhccccCC-ccChHHHHHHHHH-HHhhccchHHH
Q 035527          258 LTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPK-VAEQEDLIDVLLTEMKIADD-HQTFDSIKSTIME-NIAAMDTIKVT  334 (522)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~l~~ll~~~~~~~~-~~~~~~i~~~~~~-~~ag~~tt~~~  334 (522)
                      +.+..+...+..+.+.+++.+.|+++++..+.+ .....|+++.+++...+.+. .++++++.+++.+ ++||+|||+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~t  346 (543)
T PLN02971        267 LNGHEKIMRESSAIMDKYHDPIIDERIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNA  346 (543)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHH
Confidence            112334455566777888888888775432111 11146999999986543322 4899999999999 99999999999


Q ss_pred             HHHHHHHHhhCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCC-CCcccccccceeecEEeCCCc
Q 035527          335 LEWAMTNLMKNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQ-FLPRETTERCVIDGYHIPAKT  413 (522)
Q Consensus       335 l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~-~~~R~~~~d~~~~g~~ip~G~  413 (522)
                      ++|++++|++||++|+|+|+||+++++.++.++++++.+|||++|||+|+||++|+++ .++|.+.+|++++||.||||+
T Consensus       347 l~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt  426 (543)
T PLN02971        347 VEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGS  426 (543)
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCC
Confidence            9999999999999999999999999987778999999999999999999999999999 589999999999999999999


Q ss_pred             EEEEechhhccCCCCCCCCCCCCCCcccCCCCC--CCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCC
Q 035527          414 TVFVNVLAIGRDGQVWDKPDEFIPERFVGSNID--MGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPH  491 (522)
Q Consensus       414 ~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~--~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~  491 (522)
                      .|+++.|++||||++|+||++|+||||++...+  ....+..|+|||+|+|.|+|++||+.|+++++|+||++|+|++.+
T Consensus       427 ~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~  506 (543)
T PLN02971        427 QVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAG  506 (543)
T ss_pred             EEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCC
Confidence            999999999999999999999999999975322  123467899999999999999999999999999999999999876


Q ss_pred             CCCCCCCCCCCCCcceecccCCeeeEeeec
Q 035527          492 GMEIDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      +.  .+++....++ ++..++++.+.+++|
T Consensus       507 ~~--~~~~~~~~~~-~~~~~~~~~~~~~~~  533 (543)
T PLN02971        507 SE--TRVELMESSH-DMFLSKPLVMVGELR  533 (543)
T ss_pred             CC--CCcchhhhcC-cccccccceeeeeec
Confidence            54  2455556666 665556899998887


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=5.4e-76  Score=596.11  Aligned_cols=466  Identities=35%  Similarity=0.634  Sum_probs=378.6

Q ss_pred             cCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCcccc
Q 035527           27 TRAKLPPGPPGLPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGTQ  106 (522)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~  106 (522)
                      +..+.||||+++|++||++.+ ..++...+.+++++||++|++++|+.++++++||+++++++.++...|.+++......
T Consensus        31 ~~~~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~  109 (517)
T PLN02687         31 HKRPLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAE  109 (517)
T ss_pred             CCCCCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchh
Confidence            445678999999999999888 5668889999999999999999999999999999999999998877888776543333


Q ss_pred             ccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccccc
Q 035527          107 KLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAADD  186 (522)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  186 (522)
                      .....+.+.+++.+|+.|+++|+.+..+.|+.+.++.+.+.+.+++.                 .+++.|...       
T Consensus       110 ~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~-----------------~l~~~l~~~-------  165 (517)
T PLN02687        110 HMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVA-----------------LLVRELARQ-------  165 (517)
T ss_pred             hhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHH-----------------HHHHHHHHh-------
Confidence            33323346677778999999999985489999999999999999999                 999999753       


Q ss_pred             cccCCCccchHHHHHHHHHHHHHHHhcCccccccc-hhHHHhHHHHHHHHHHhhccccccccccccchhhhhhhhhHHHH
Q 035527          187 YVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEG-TAAVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNRRL  265 (522)
Q Consensus       187 ~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~  265 (522)
                        .+++++|+.+++..+++++++.++||.++.... .+....+.+.+...............+|++. |+.. .+..++.
T Consensus       166 --~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-~l~~-~~~~~~~  241 (517)
T PLN02687        166 --HGTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALR-WLDL-QGVVGKM  241 (517)
T ss_pred             --cCCCceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHH-HhCc-ccHHHHH
Confidence              234689999999999999999999999875321 1224556666666554433322234455443 3211 1223455


Q ss_pred             HhhhhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhccc-----cCCccChHHHHHHHHH-HHhhccchHHHHHHHH
Q 035527          266 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKI-----ADDHQTFDSIKSTIME-NIAAMDTIKVTLEWAM  339 (522)
Q Consensus       266 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~-----~~~~~~~~~i~~~~~~-~~ag~~tt~~~l~~~l  339 (522)
                      .+..+.+.+++.+.++++++....+.....|+++.+++....     .+..++++++.+++.. ++||+|||+++++|++
T Consensus       242 ~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l  321 (517)
T PLN02687        242 KRLHRRFDAMMNGIIEEHKAAGQTGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAI  321 (517)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHH
Confidence            566778888899999888765322112257999999986543     1246999999999999 9999999999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCC-CCcccccccceeecEEeCCCcEEEEe
Q 035527          340 TNLMKNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQ-FLPRETTERCVIDGYHIPAKTTVFVN  418 (522)
Q Consensus       340 ~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~  418 (522)
                      |+|++||++|+++++|++++.+.++.++.+++.+||||+|||+||||++|+++ .++|.+.+|++++|+.||||+.|.++
T Consensus       322 ~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~  401 (517)
T PLN02687        322 AELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVN  401 (517)
T ss_pred             HHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEe
Confidence            99999999999999999999887777899999999999999999999999999 58999999999999999999999999


Q ss_pred             chhhccCCCCCCCCCCCCCCcccCCCCC----CCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCCC
Q 035527          419 VLAIGRDGQVWDKPDEFIPERFVGSNID----MGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGME  494 (522)
Q Consensus       419 ~~~~~~d~~~~~dp~~F~P~R~l~~~~~----~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~  494 (522)
                      .+.+|+||++|+||++|+||||++.+..    .+..+..|+|||+|+|.|+|++||++|+++++|+|+++|+|++.++.+
T Consensus       402 ~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~  481 (517)
T PLN02687        402 VWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQT  481 (517)
T ss_pred             cHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCC
Confidence            9999999999999999999999975321    122456899999999999999999999999999999999999987644


Q ss_pred             CCCCCCCCCCcceecccCCeeeEeeec
Q 035527          495 IDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       495 ~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      .+++.....+++++.+..++.+++++|
T Consensus       482 ~~~~~~~~~~~~~~~~~~~~~~~~~~R  508 (517)
T PLN02687        482 PDKLNMEEAYGLTLQRAVPLMVHPRPR  508 (517)
T ss_pred             cccCCcccccceeeecCCCeEEeeccC
Confidence            334444445667777778999999988


No 6  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=8.8e-76  Score=592.96  Aligned_cols=472  Identities=39%  Similarity=0.713  Sum_probs=370.6

Q ss_pred             hhhccccCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCC
Q 035527           21 QKHRKNTRAKLPPGPPGLPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRP  100 (522)
Q Consensus        21 ~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~  100 (522)
                      +.+...+..+.||||+++|++||++.+...++...+.+|+++||++|++++++.++++++||+.+++|+.++...|.+++
T Consensus        20 ~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~   99 (502)
T PLN02966         20 YQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRP   99 (502)
T ss_pred             HhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCC
Confidence            33333345678999999999999998755568889999999999999999999999999999999999998777776655


Q ss_pred             CCccccccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcc
Q 035527          101 ALSGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAP  180 (522)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  180 (522)
                      ..........+.....+..+++.|+.+|+.+..+.|+...+..+.+.+.+.+.                 ++++.|.+. 
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~-----------------~l~~~l~~~-  161 (502)
T PLN02966        100 PHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEAR-----------------RMMDKINKA-  161 (502)
T ss_pred             CCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH-----------------HHHHHHHHh-
Confidence            43322222222223445567999999999965899999999999999999999                 999999764 


Q ss_pred             cccccccccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccccccccccccchhhhhhhh
Q 035527          181 AAAADDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTG  260 (522)
Q Consensus       181 ~~~~~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~  260 (522)
                             ..+++++|+.+++..+++++++.++||.+++....+ ...+.+.+...........+...+|++. ++..+.+
T Consensus       162 -------~~~~~~vdl~~~~~~~t~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~  232 (502)
T PLN02966        162 -------ADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDGEE-MKRFIKILYGTQSVLGKIFFSDFFPYCG-FLDDLSG  232 (502)
T ss_pred             -------ccCCCceeHHHHHHHHHHHHHHHHHhCCccCccchH-HHHHHHHHHHHHHHhCcccHHHhhchhh-hhhhhcc
Confidence                   344668999999999999999999999988754333 4455555555444444333444455432 1211112


Q ss_pred             hHHHHHhhhhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhcccc--CCccChHHHHHHHHH-HHhhccchHHHHHH
Q 035527          261 WNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKIA--DDHQTFDSIKSTIME-NIAAMDTIKVTLEW  337 (522)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~--~~~~~~~~i~~~~~~-~~ag~~tt~~~l~~  337 (522)
                      ..+......+...+++.+.+++..+....... ..++++.+++...+.  +..++.+++.+++.+ ++||+|||+++++|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~  311 (502)
T PLN02966        233 LTAYMKECFERQDTYIQEVVNETLDPKRVKPE-TESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVW  311 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccccccc-cccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHH
Confidence            22233345556666677776665432211112 468999998765433  235899999999999 99999999999999


Q ss_pred             HHHHHhhCcHHHHHHHHHHHHHhccC--CCCCCCCCCCchhHHHHHHHHhccCCCCCC-CcccccccceeecEEeCCCcE
Q 035527          338 AMTNLMKNPEAMKKVQKEVRYVVKDK--GFVDEDDLPRLEYLKAVVKETLRFQPAAQF-LPRETTERCVIDGYHIPAKTT  414 (522)
Q Consensus       338 ~l~~L~~~p~~~~~lr~Ei~~~~~~~--~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~-~~R~~~~d~~~~g~~ip~G~~  414 (522)
                      ++|+|++||++|+|+++|++++++.+  ..++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.
T Consensus       312 ~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~  391 (502)
T PLN02966        312 GMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTT  391 (502)
T ss_pred             HHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCE
Confidence            99999999999999999999998743  357999999999999999999999999994 689999999999999999999


Q ss_pred             EEEechhhccCCCCC-CCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCC
Q 035527          415 VFVNVLAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGM  493 (522)
Q Consensus       415 v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~  493 (522)
                      |.++++++||||++| +||++|+||||++...+....+..|+|||+|+|+|+|++||++|+++++|.||++|+|++.++.
T Consensus       392 V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~  471 (502)
T PLN02966        392 VNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGM  471 (502)
T ss_pred             EEEecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCC
Confidence            999999999999999 9999999999997543222346789999999999999999999999999999999999998776


Q ss_pred             CCCCCCCCCCCcceecccCCeeeEeee
Q 035527          494 EIDDLDYDANPGFTQHKKNPLRLAATK  520 (522)
Q Consensus       494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  520 (522)
                      +.++++.+...|++..+..++.+.++|
T Consensus       472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (502)
T PLN02966        472 KPDDINMDVMTGLAMHKSQHLKLVPEK  498 (502)
T ss_pred             CcccCCcccccCeeeccCCCeEEEEEe
Confidence            555566666667776565577766665


No 7  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.5e-75  Score=589.20  Aligned_cols=486  Identities=30%  Similarity=0.572  Sum_probs=385.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhc-cccCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCH
Q 035527            4 LVLVILFCLPIFLLFLLQKHR-KNTRAKLPPGPPGLPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSA   82 (522)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp   82 (522)
                      +.-+....++.+++.++.++. ...+.+.||||+++|++||++.+ ...++.++.+++++||+||++++|++++|+++||
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp   82 (504)
T PLN00110          4 LLELAAATLLFFITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTP   82 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCH
Confidence            333334444444444444443 34567789999999999999877 5667889999999999999999999999999999


Q ss_pred             HHHHHHHHhCCcccccCCCCccccccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccc
Q 035527           83 KLAKEAFKTHDLQFSSRPALSGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRK  162 (522)
Q Consensus        83 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  162 (522)
                      +++++++.++...|.+++..........+..+.+++.+|+.|+++|+.+..+.|+...++.+.+.+.+++.         
T Consensus        83 e~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~---------  153 (504)
T PLN00110         83 EAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELG---------  153 (504)
T ss_pred             HHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHH---------
Confidence            99999999887788887754332222223345667778999999999986578999999999999998888         


Q ss_pred             cCCchhHHHHHHHHhhcccccccccccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccc
Q 035527          163 SDGLNQKKIYISKLSAAPAAAADDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRV  242 (522)
Q Consensus       163 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (522)
                              .+++.+.+.        ..+++++|+.+++..++.++++.++||.++.........++.+.+..........
T Consensus       154 --------~~~~~l~~~--------~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (504)
T PLN00110        154 --------HMLRAMLEL--------SQRGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYF  217 (504)
T ss_pred             --------HHHHHHHHh--------ccCCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccc
Confidence                    888888764        3456789999999999999999999999762211121455666666655443333


Q ss_pred             cccccccccchhhhhhhhhHHHHHhhhhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhccc-cCCccChHHHHHHH
Q 035527          243 FFRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKI-ADDHQTFDSIKSTI  321 (522)
Q Consensus       243 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~-~~~~~~~~~i~~~~  321 (522)
                      .+...+|++. |+. ..+..++..+..+.+.+++.+.++++.+....... ..|+++.+++.... .+..++++++.+++
T Consensus       218 ~~~~~~p~l~-~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~d~l~~ll~~~~~~~~~~l~~~~i~~~~  294 (504)
T PLN00110        218 NIGDFIPSIA-WMD-IQGIERGMKHLHKKFDKLLTRMIEEHTASAHERKG-NPDFLDVVMANQENSTGEKLTLTNIKALL  294 (504)
T ss_pred             cHHHHcchHh-hhC-cchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-CCChhhHHhhcccccCCCCCCHHHHHHHH
Confidence            3334556543 322 11233455566777888888888877654322112 46899999976432 23468999999999


Q ss_pred             HH-HHhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCC-CCccccc
Q 035527          322 ME-NIAAMDTIKVTLEWAMTNLMKNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQ-FLPRETT  399 (522)
Q Consensus       322 ~~-~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~-~~~R~~~  399 (522)
                      +. ++||+|||+++++|++++|++||++|+|+++|++++++.++.++++++++||||+|||+||||++|+++ .++|.+.
T Consensus       295 ~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~  374 (504)
T PLN00110        295 LNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVST  374 (504)
T ss_pred             HhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccC
Confidence            99 999999999999999999999999999999999999887777899999999999999999999999999 4899999


Q ss_pred             ccceeecEEeCCCcEEEEechhhccCCCCCCCCCCCCCCcccCCCCCC---CCCCccccccCCCCCCCCcHHhHHHHHHH
Q 035527          400 ERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDM---GGQNFEFIPFGAGRRICTGLPIAMPIVEL  476 (522)
Q Consensus       400 ~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~---~~~~~~~~pFg~G~r~C~G~~lA~~~~~~  476 (522)
                      +|++++||.||||+.|.++.+++|+||++|+||++|+||||++.+...   +..++.|+|||+|+|.|+|++||+.|+++
T Consensus       375 ~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~  454 (504)
T PLN00110        375 QACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEY  454 (504)
T ss_pred             CCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999653211   11235799999999999999999999999


Q ss_pred             HHHHHHHhceeecCCCCCCCCCCCCCCCcceecccCCeeeEeeec
Q 035527          477 ALANLLYKLDWTMPHGMEIDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       477 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      ++|+|+++|||++.++.   +++.....++++.|+.++++++++|
T Consensus       455 ~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r  496 (504)
T PLN00110        455 ILGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSAMVTPR  496 (504)
T ss_pred             HHHHHHHhceeecCCCC---ccCcccccccccccCCCceEeeccC
Confidence            99999999999987653   3344445678888999999999988


No 8  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=4.1e-75  Score=590.91  Aligned_cols=486  Identities=32%  Similarity=0.556  Sum_probs=385.0

Q ss_pred             HHHHHHHHHHHHHhhhccccCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHH
Q 035527            8 ILFCLPIFLLFLLQKHRKNTRAKLPPGPPGLPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKE   87 (522)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~   87 (522)
                      +.++++.++.+.+.+++..++.+.||||+++|++||++.+ ..+++..+.++++|||++|++++++.+.++++||+++++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~   88 (514)
T PLN03112         10 FSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIRE   88 (514)
T ss_pred             HHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHH
Confidence            3333444444444555556677889999999999999887 567888899999999999999999999999999999999


Q ss_pred             HHHhCCcccccCCCCccccccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCch
Q 035527           88 AFKTHDLQFSSRPALSGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLN  167 (522)
Q Consensus        88 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (522)
                      |+.++...|.+++.........++....++..+|+.|+.+|+.+..+.|+...++.+.+.+.++++              
T Consensus        89 vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~--------------  154 (514)
T PLN03112         89 ILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEAR--------------  154 (514)
T ss_pred             HHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHH--------------
Confidence            998887788877654322222222234456678999999999976789999999999999999998              


Q ss_pred             hHHHHHHHHhhcccccccccccCCCccchHHHHHHHHHHHHHHHhcCccccccch---hHHHhHHHHHHHHHHhhccccc
Q 035527          168 QKKIYISKLSAAPAAAADDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGT---AAVSRLHSVFAETQAMVGRVFF  244 (522)
Q Consensus       168 ~~~~l~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  244 (522)
                         .+++.+.+.        ...++++|+.+.+..+++++++.++||.++.....   +....+.+.+............
T Consensus       155 ---~lv~~l~~~--------~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (514)
T PLN03112        155 ---HLIQDVWEA--------AQTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYL  223 (514)
T ss_pred             ---HHHHHHHHh--------hccCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcH
Confidence               899887654        23456899999999999999999999998643211   2134455555555443332233


Q ss_pred             cccccccchhhhhhhhhHHHHHhhhhhHHHHHHHHHHhhcCCCCCC--ccccccHHHHHHHhccccC-CccChHHHHHHH
Q 035527          245 RDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPK--VAEQEDLIDVLLTEMKIAD-DHQTFDSIKSTI  321 (522)
Q Consensus       245 ~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~l~~ll~~~~~~~-~~~~~~~i~~~~  321 (522)
                      ...+|++. ++.. .+..++..+..+.+.+++...++++++..+..  .....|+++.+++...+.+ ..++++++.+++
T Consensus       224 ~~~~p~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~  301 (514)
T PLN03112        224 GDYLPAWR-WLDP-YGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALM  301 (514)
T ss_pred             HHhChHHH-hcCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHH
Confidence            34455443 2211 12235556677778888888888766543211  1224689999998654332 358999999999


Q ss_pred             HH-HHhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCC-CCccccc
Q 035527          322 ME-NIAAMDTIKVTLEWAMTNLMKNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQ-FLPRETT  399 (522)
Q Consensus       322 ~~-~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~-~~~R~~~  399 (522)
                      .. ++||+|||+++++|++++|++||++|+++|+|++++.+.++.++.+++++|||++|||+||+|++|+++ +++|.+.
T Consensus       302 ~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~  381 (514)
T PLN03112        302 QDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESL  381 (514)
T ss_pred             HHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccC
Confidence            99 999999999999999999999999999999999999987777999999999999999999999999999 5789999


Q ss_pred             ccceeecEEeCCCcEEEEechhhccCCCCCCCCCCCCCCcccCCCCC----CCCCCccccccCCCCCCCCcHHhHHHHHH
Q 035527          400 ERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNID----MGGQNFEFIPFGAGRRICTGLPIAMPIVE  475 (522)
Q Consensus       400 ~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~----~~~~~~~~~pFg~G~r~C~G~~lA~~~~~  475 (522)
                      +|++++|+.||||+.|.++++.+|+||++|+||++||||||.++...    .......|+|||+|+|.|+|++||++|++
T Consensus       382 ~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~  461 (514)
T PLN03112        382 RATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVL  461 (514)
T ss_pred             CCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHH
Confidence            99999999999999999999999999999999999999998754211    11234689999999999999999999999


Q ss_pred             HHHHHHHHhceeecCCCCCCCCCCCCCCCcceecccCCeeeEeeec
Q 035527          476 LALANLLYKLDWTMPHGMEIDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       476 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      +++|.|+++|||++.++....++.+....++++.+++++.+++.+|
T Consensus       462 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  507 (514)
T PLN03112        462 MALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPR  507 (514)
T ss_pred             HHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecC
Confidence            9999999999999876543345556566678878888999999998


No 9  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.9e-75  Score=592.04  Aligned_cols=460  Identities=34%  Similarity=0.631  Sum_probs=365.1

Q ss_pred             cCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCcccc
Q 035527           27 TRAKLPPGPPGLPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGTQ  106 (522)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~  106 (522)
                      ++.+.||||+++|++|+++.+ ....+..+.+|+++||++|++++++.++++++||+++++|+.++...|..++......
T Consensus        33 ~~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~  111 (516)
T PLN02183         33 RRLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS  111 (516)
T ss_pred             CCCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence            445789999999999999876 4455677899999999999999999999999999999999998777777776543322


Q ss_pred             ccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccccc
Q 035527          107 KLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAADD  186 (522)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  186 (522)
                      ....++.+.+++.+|+.|+++|+.+..++|+...++.+.+.. +++.                 .+++.+...       
T Consensus       112 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~-----------------~~~~~l~~~-------  166 (516)
T PLN02183        112 YLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVD-----------------SMVRSVSSN-------  166 (516)
T ss_pred             ccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHH-----------------HHHHHHHhc-------
Confidence            222222356677889999999999657899999999888864 5677                 888888542       


Q ss_pred             cccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccccccccccccchhhhhhhhhHHHHH
Q 035527          187 YVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNRRLR  266 (522)
Q Consensus       187 ~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~  266 (522)
                         .++++|+.+++..++++++++++||.+.+..    ..++.+.+...............+|++. ++.. ....++..
T Consensus       167 ---~~~~v~~~~~~~~~~~~vi~~~~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~-~~~~~~~~  237 (516)
T PLN02183        167 ---IGKPVNIGELIFTLTRNITYRAAFGSSSNEG----QDEFIKILQEFSKLFGAFNVADFIPWLG-WIDP-QGLNKRLV  237 (516)
T ss_pred             ---CCCcEeHHHHHHHHHHHHHHhHhhcCcccch----HHHHHHHHHHHHHHhCCccHHHhcchhH-hccc-ccHHHHHH
Confidence               3568999999999999999999999976542    3345555554444333333344556543 2211 11234556


Q ss_pred             hhhhhHHHHHHHHHHhhcCCCCC------CccccccHHHHHHHhcccc-----------CCccChHHHHHHHHH-HHhhc
Q 035527          267 NNFSDCDKVYQQLIEDHLDPKRP------KVAEQEDLIDVLLTEMKIA-----------DDHQTFDSIKSTIME-NIAAM  328 (522)
Q Consensus       267 ~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~l~~ll~~~~~~-----------~~~~~~~~i~~~~~~-~~ag~  328 (522)
                      +..+.+.+++.++++++.+....      +.....|+++.+++.....           +..++++++..++.+ ++||+
T Consensus       238 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~  317 (516)
T PLN02183        238 KARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGT  317 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcch
Confidence            67777888888777766432211      1112468999999754321           125899999999999 99999


Q ss_pred             cchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCCCCcccccccceeecEE
Q 035527          329 DTIKVTLEWAMTNLMKNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCVIDGYH  408 (522)
Q Consensus       329 ~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~~g~~  408 (522)
                      |||+++++|++|+|++||++|+|+++|++++++.++.++.+++++||||+|||+||||++|+++...|.+.+|++++||.
T Consensus       318 dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~  397 (516)
T PLN02183        318 ETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYF  397 (516)
T ss_pred             hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEE
Confidence            99999999999999999999999999999998866678999999999999999999999999998889999999999999


Q ss_pred             eCCCcEEEEechhhccCCCCCCCCCCCCCCcccCCCCC-CCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhcee
Q 035527          409 IPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNID-MGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDW  487 (522)
Q Consensus       409 ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~-~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~  487 (522)
                      ||||+.|.++.+++||||++|+||++|+||||++++.+ ...+++.|+|||+|+|.|+|++||++|+++++|+|+++|++
T Consensus       398 IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~  477 (516)
T PLN02183        398 IPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTW  477 (516)
T ss_pred             ECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEE
Confidence            99999999999999999999999999999999975432 12345689999999999999999999999999999999999


Q ss_pred             ecCCCCCCCCCCCCCCCcceecccCCeeeEeeec
Q 035527          488 TMPHGMEIDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      ++.++....+......++.+..+.+++.+.+++|
T Consensus       478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        478 ELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             EcCCCCCCCCCChhhccccccccCCCcEEEeecC
Confidence            9877653334544455566655666888888887


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.3e-73  Score=575.73  Aligned_cols=452  Identities=24%  Similarity=0.392  Sum_probs=359.7

Q ss_pred             ccCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCccc
Q 035527           26 NTRAKLPPGPPGLPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGT  105 (522)
Q Consensus        26 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~  105 (522)
                      +.+.+.+|||+++|++||++.+ ..+++..+.+++++||++|++++|+.++|+++||+++++|+.++...|..++.....
T Consensus        25 ~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~  103 (482)
T PTZ00404         25 KIHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSI  103 (482)
T ss_pred             hccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCccee
Confidence            4567788999999999999888 557889999999999999999999999999999999999998876677766654332


Q ss_pred             cccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhccccccc
Q 035527          106 QKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAAD  185 (522)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  185 (522)
                      ..... +. .+++.+|+.|+++|+.+ .+.|+...++.+.+.+.+.+.                 .+++.|.+.      
T Consensus       104 ~~~~~-~~-~l~~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~-----------------~l~~~l~~~------  157 (482)
T PTZ00404        104 KHGTF-YH-GIVTSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVD-----------------VLIESMKKI------  157 (482)
T ss_pred             eeecc-CC-ceeccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHH-----------------HHHHHHHHH------
Confidence            21111 23 34556899999999998 899999999999999999999                 999998764      


Q ss_pred             ccccCCCccchHHHHHHHHHHHHHHHhcCccccccch---hHHHhHHHHHHHHHHhhccccccccccccchhhhhhhhhH
Q 035527          186 DYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGT---AAVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWN  262 (522)
Q Consensus       186 ~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~  262 (522)
                        .+.++.+|+.+++..+++++++.++||.+.+..++   +....+.+.+...+...........++++.+.+.   .+.
T Consensus       158 --~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  232 (482)
T PTZ00404        158 --ESSGETFEPRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYY---QYL  232 (482)
T ss_pred             --HhcCCccCHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhH---HHH
Confidence              33456799999999999999999999998764311   1134555555555544333222222333221111   112


Q ss_pred             HHHHhhhhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchHHHHHHHHHH
Q 035527          263 RRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIKVTLEWAMTN  341 (522)
Q Consensus       263 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~~~l~~~l~~  341 (522)
                      ....+..+.+.+++.+.++++++....  ....|+++.+++...+. .....+++++++.. ++||+|||+++++|++|+
T Consensus       233 ~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~dll~~ll~~~~~~-~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~  309 (482)
T PTZ00404        233 EHTDKNFKKIKKFIKEKYHEHLKTIDP--EVPRDLLDLLIKEYGTN-TDDDILSILATILDFFLAGVDTSATSLEWMVLM  309 (482)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCC--CCcccHHHHHHHHhccC-CcccHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence            233455667788888888776543221  12578999999764321 12233458889999 999999999999999999


Q ss_pred             HhhCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCC-CCccccccccee-ecEEeCCCcEEEEec
Q 035527          342 LMKNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQ-FLPRETTERCVI-DGYHIPAKTTVFVNV  419 (522)
Q Consensus       342 L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~-~~~R~~~~d~~~-~g~~ip~G~~v~~~~  419 (522)
                      |++||++|+|+++|++++++++..++.+++++||||+|||+||||++|+++ .++|.+.+|+++ +||.||||+.|.++.
T Consensus       310 L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~  389 (482)
T PTZ00404        310 LCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINY  389 (482)
T ss_pred             HHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeH
Confidence            999999999999999999987667899999999999999999999999999 479999999999 999999999999999


Q ss_pred             hhhccCCCCCCCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCCCCCCCC
Q 035527          420 LAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGMEIDDLD  499 (522)
Q Consensus       420 ~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~  499 (522)
                      +++|+||++|+||++|+||||++..     .+..|+|||+|+|.|+|++||++|++++++.|+++|+|+.+++.   +..
T Consensus       390 ~a~hrdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~  461 (482)
T PTZ00404        390 YSLGRNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGK---KID  461 (482)
T ss_pred             HHhhCCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCC---CCC
Confidence            9999999999999999999998642     45689999999999999999999999999999999999987653   222


Q ss_pred             CCCCCcceecccCCeeeEeeec
Q 035527          500 YDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      .....++++. +.+++|++++|
T Consensus       462 ~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        462 ETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             cccccceeec-CCCceeeeecC
Confidence            3334567777 45899999887


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.6e-73  Score=574.77  Aligned_cols=467  Identities=27%  Similarity=0.476  Sum_probs=354.4

Q ss_pred             cccCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCcc
Q 035527           25 KNTRAKLPPGPPGLPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSG  104 (522)
Q Consensus        25 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~  104 (522)
                      ..++.+.||||+++|++|++..+.....+..+.+++++||+||++++|+++.|+++||+.+++++.++...|.+++....
T Consensus        25 ~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~  104 (503)
T PLN02394         25 RGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV  104 (503)
T ss_pred             hcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence            34567889999999999999887434456788999999999999999999999999999999999887777776654333


Q ss_pred             ccccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccc
Q 035527          105 TQKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAA  184 (522)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  184 (522)
                      ...+...+.+.+++.+|+.|+++||.+..+.|+.+.++.+.+.+.++++                 .+++.|....    
T Consensus       105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~-----------------~lv~~l~~~~----  163 (503)
T PLN02394        105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAD-----------------LVVEDVRANP----  163 (503)
T ss_pred             HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHH-----------------HHHHHHHHhh----
Confidence            3333222335667778999999999986699999999999999999999                 9999987541    


Q ss_pred             cccccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhcc--ccccccccccchhhhhhhhhH
Q 035527          185 DDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGR--VFFRDCLPFVGCWLDSLTGWN  262 (522)
Q Consensus       185 ~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~  262 (522)
                         ...++.+|+.+.+..+++++++.++||.+++...+.....+.............  ......+|++.+++   ....
T Consensus       164 ---~~~~~~v~~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  237 (503)
T PLN02394        164 ---EAATEGVVIRRRLQLMMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL---RGYL  237 (503)
T ss_pred             ---hccCCcEecHHHHHHHHHHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh---hHHH
Confidence               112446899999999999999999999988653222122222222222221111  11123344433211   1111


Q ss_pred             HHHHhhhhhHHH-HHHHHHHhhcCCCC---CCccccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchHHHHHH
Q 035527          263 RRLRNNFSDCDK-VYQQLIEDHLDPKR---PKVAEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIKVTLEW  337 (522)
Q Consensus       263 ~~~~~~~~~~~~-~~~~~i~~~~~~~~---~~~~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~~~l~~  337 (522)
                      +..........+ +....++++++..+   .+.....|+++.+++...++  .++++++..++.+ ++||+|||+++++|
T Consensus       238 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~l~~~~i~~~~~~~~~AG~dTTa~tl~~  315 (503)
T PLN02394        238 KICQDVKERRLALFKDYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKKG--EINEDNVLYIVENINVAAIETTLWSIEW  315 (503)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhhhHHHHHHhccccC--CCCHHHHHHHHHHHHHhchhhHHHHHHH
Confidence            112222222222 22334555443211   01112478999999875443  5899999999999 89999999999999


Q ss_pred             HHHHHhhCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCC-CCcccccccceeecEEeCCCcEEE
Q 035527          338 AMTNLMKNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQ-FLPRETTERCVIDGYHIPAKTTVF  416 (522)
Q Consensus       338 ~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~-~~~R~~~~d~~~~g~~ip~G~~v~  416 (522)
                      ++|+|++||++|+|||+||+++.+.++.++++++++||||+|||+||||++|+++ ..+|.+.+|++++||.||||+.|.
T Consensus       316 ~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~  395 (503)
T PLN02394        316 GIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKIL  395 (503)
T ss_pred             HHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEE
Confidence            9999999999999999999999987667899999999999999999999999999 558999999999999999999999


Q ss_pred             EechhhccCCCCCCCCCCCCCCcccCCCCC--CCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCCC
Q 035527          417 VNVLAIGRDGQVWDKPDEFIPERFVGSNID--MGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGME  494 (522)
Q Consensus       417 ~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~--~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~  494 (522)
                      ++++++|+||++|+||++|+||||++.+.+  .......|+|||+|+|.|+|++||++|+++++|.|+++|+|++.++.+
T Consensus       396 ~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~  475 (503)
T PLN02394        396 VNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS  475 (503)
T ss_pred             EchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC
Confidence            999999999999999999999999975421  223456899999999999999999999999999999999999877642


Q ss_pred             CCCCCCCCCCc-ceecccCCeeeEeeecC
Q 035527          495 IDDLDYDANPG-FTQHKKNPLRLAATKFI  522 (522)
Q Consensus       495 ~~~~~~~~~~~-~~~~~~~~~~~~~~~r~  522 (522)
                        +++.....+ +....+.++.+++.+|.
T Consensus       476 --~~~~~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        476 --KIDVSEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             --cCccccccCceeeccCCCceEEeecCC
Confidence              233333343 55555669999999983


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.4e-72  Score=571.37  Aligned_cols=462  Identities=29%  Similarity=0.469  Sum_probs=360.4

Q ss_pred             cCCCCCCCCCCCcccccccCCC--CCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCcc
Q 035527           27 TRAKLPPGPPGLPLIGNLHQLD--ATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSG  104 (522)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~  104 (522)
                      ...+.||||+++|++||++.+.  ..++...+.+++++||++|++++|+.+.++++||+++++++.++...|..++....
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            3567899999999999997652  23577889999999999999999999999999999999999988888887765432


Q ss_pred             ccccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccc
Q 035527          105 TQKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAA  184 (522)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  184 (522)
                      ...+..+.....+..+|+.|+++||.+..+.|+.+.++.+.+.+.++++                 .+++.|...     
T Consensus       112 ~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~-----------------~l~~~l~~~-----  169 (519)
T PLN00168        112 SRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRR-----------------VLVDKLRRE-----  169 (519)
T ss_pred             hhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH-----------------HHHHHHHHh-----
Confidence            2222211112222367999999998666999999999999999999999                 999999764     


Q ss_pred             cccccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhh-ccccccccccccchhhhhhhhhHH
Q 035527          185 DDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMV-GRVFFRDCLPFVGCWLDSLTGWNR  263 (522)
Q Consensus       185 ~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~~~  263 (522)
                         ...++.+|+.+.+..++.++++.++||.+++..  . ...+........... ....+...+|.+..++.  .+..+
T Consensus       170 ---~~~~~~v~~~~~~~~~~~~ii~~~~fG~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~--~~~~~  241 (519)
T PLN00168        170 ---AEDAAAPRVVETFQYAMFCLLVLMCFGERLDEP--A-VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLF--RGRLQ  241 (519)
T ss_pred             ---cCCCCCcCHHHHHHHHHHHHHHHHHcCCCcChh--h-HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhh--hhHHH
Confidence               233457899999999999999999999987642  1 222323333222111 11223344554332211  11233


Q ss_pred             HHHhhhhhHHHHHHHHHHhhcCCCC---C-C--c----cccccHHHHHHHhccc--cCCccChHHHHHHHHH-HHhhccc
Q 035527          264 RLRNNFSDCDKVYQQLIEDHLDPKR---P-K--V----AEQEDLIDVLLTEMKI--ADDHQTFDSIKSTIME-NIAAMDT  330 (522)
Q Consensus       264 ~~~~~~~~~~~~~~~~i~~~~~~~~---~-~--~----~~~~~~l~~ll~~~~~--~~~~~~~~~i~~~~~~-~~ag~~t  330 (522)
                      +..+..+.+.+++.++++++++...   . +  .    ....|+++.|++....  .+..++++++.+++.+ ++||+||
T Consensus       242 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dT  321 (519)
T PLN00168        242 KALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDT  321 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchH
Confidence            4456777888888888887754321   0 0  0    0135899999976432  2236999999999999 9999999


Q ss_pred             hHHHHHHHHHHHhhCcHHHHHHHHHHHHHhccC-CCCCCCCCCCchhHHHHHHHHhccCCCCC-CCcccccccceeecEE
Q 035527          331 IKVTLEWAMTNLMKNPEAMKKVQKEVRYVVKDK-GFVDEDDLPRLEYLKAVVKETLRFQPAAQ-FLPRETTERCVIDGYH  408 (522)
Q Consensus       331 t~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~p~~~-~~~R~~~~d~~~~g~~  408 (522)
                      |+++++|++++|++||++|+|+++||+++++.+ +.++.+++++||||+|||+||||++|+++ .++|.+.+|++++||.
T Consensus       322 Ta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~  401 (519)
T PLN00168        322 TSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYL  401 (519)
T ss_pred             HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEE
Confidence            999999999999999999999999999998753 56899999999999999999999999998 5689999999999999


Q ss_pred             eCCCcEEEEechhhccCCCCCCCCCCCCCCcccCCCCC-----CCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHH
Q 035527          409 IPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNID-----MGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLY  483 (522)
Q Consensus       409 ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~-----~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~  483 (522)
                      ||||+.|.++.+++||||++|+||++|+||||++.+..     ....+..|+|||+|+|.|+|++||++|+++++|.|++
T Consensus       402 IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~  481 (519)
T PLN00168        402 IPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVR  481 (519)
T ss_pred             ECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999974211     1123468999999999999999999999999999999


Q ss_pred             hceeecCCCCCCCCCCCCCCCcceecccCCeeeEeeec
Q 035527          484 KLDWTMPHGMEIDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       484 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      +|||++.++.   +++.....+++..+++++.+++++|
T Consensus       482 ~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~R  516 (519)
T PLN00168        482 EFEWKEVPGD---EVDFAEKREFTTVMAKPLRARLVPR  516 (519)
T ss_pred             HccceeCCCC---cCChhhhceeEEeecCCcEEEEEec
Confidence            9999987653   2233333456777888999999987


No 13 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=5.2e-73  Score=565.76  Aligned_cols=451  Identities=28%  Similarity=0.464  Sum_probs=360.6

Q ss_pred             CCCCCCCCCCCcccccccCCCCC--ChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCc-c
Q 035527           28 RAKLPPGPPGLPLIGNLHQLDAT--NLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALS-G  104 (522)
Q Consensus        28 ~~~~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~-~  104 (522)
                      ..+.||||+++|++|++.++...  +...++.++..+||++|+.++||.++++++||+.+++|+.++.....+.+.+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            56789999999999999998433  67778889999999999999999999999999999999976555555544444 2


Q ss_pred             ccccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccc
Q 035527          105 TQKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAA  184 (522)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  184 (522)
                      .....  |.|++++. |+.|+.+||.+ .+.|+...++.+...+.+...                 .++..+...     
T Consensus       113 ~~~~l--G~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~-----------------~~~~~~~~~-----  166 (497)
T KOG0157|consen  113 LKPWL--GDGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFVPVFIESSL-----------------ILLLLLELA-----  166 (497)
T ss_pred             HHHHh--cCccccCC-chHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHH-----------------HHHHHHHHh-----
Confidence            22222  34666665 99999999997 899999999999999888887                 777777663     


Q ss_pred             cccccCCCccchHHHHHHHHHHHHHHHhcCccc-cccchhHHHhHHHHHHHHHHhhcccccccccc-ccchhhhhhhhhH
Q 035527          185 DDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRF-EDEGTAAVSRLHSVFAETQAMVGRVFFRDCLP-FVGCWLDSLTGWN  262 (522)
Q Consensus       185 ~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~  262 (522)
                          ..++.+|+.+.++.+++|+++.++||... .....+ ..++.+++......+.   .....| +.. ++..+ +..
T Consensus       167 ----~~~~~vd~~~~~~~~tld~i~~~~~G~~~~~~~~~~-~~~~~~a~~~~~~~~~---~~~~~p~~~~-~~~~~-~~~  236 (497)
T KOG0157|consen  167 ----ASGEEVDLQDLLKRLTLDIICKTAMGPESLDAEGPE-LFEYVQAFDDLTELIS---KRINLPLGTK-FLYGL-KSE  236 (497)
T ss_pred             ----hcCCeEcHHHHHHHHHHHHHHHHhcCCccccccCCc-ccHHHHHHHHHHHHHH---HHHcCchhhh-HHhhc-chH
Confidence                22333999999999999999999999332 222222 3445555554433332   223334 222 22222 256


Q ss_pred             HHHHhhhhhHHHHHHHHHHhhcCCCCCCc----cccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchHHHHHH
Q 035527          263 RRLRNNFSDCDKVYQQLIEDHLDPKRPKV----AEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIKVTLEW  337 (522)
Q Consensus       263 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~~~l~~  337 (522)
                      ++..++.+.+++++.++|++++++.....    ....++++.+.....   ..++++++.+++.+ ++||+||||++++|
T Consensus       237 ~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~~~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw  313 (497)
T KOG0157|consen  237 RKLKKARKILHDFLEKIIRERREELEKEGSGEEKKRLDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTW  313 (497)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHH
Confidence            88889999999999999999886432211    225677775333222   48999999999999 99999999999999


Q ss_pred             HHHHHhhCcHHHHHHHHHHHHHhccCCC-CCCCCCCCchhHHHHHHHHhccCCCCCCCccccccccee-ecEEeCCCcEE
Q 035527          338 AMTNLMKNPEAMKKVQKEVRYVVKDKGF-VDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCVI-DGYHIPAKTTV  415 (522)
Q Consensus       338 ~l~~L~~~p~~~~~lr~Ei~~~~~~~~~-~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~-~g~~ip~G~~v  415 (522)
                      ++++|+.||++|+++++|++++++++.. .+..+.++|+||++||+||||||||+|.+.|.+.+|+++ +||.||||+.|
T Consensus       314 ~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V  393 (497)
T KOG0157|consen  314 TLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNV  393 (497)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEE
Confidence            9999999999999999999999975432 233333469999999999999999999999999999999 58999999999


Q ss_pred             EEechhhccCCCCCC-CCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCCC
Q 035527          416 FVNVLAIGRDGQVWD-KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGME  494 (522)
Q Consensus       416 ~~~~~~~~~d~~~~~-dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~  494 (522)
                      +++++++|||+++|+ ||++||||||+++....+.++++|+|||+|+|.|+|++||++|+|+++++|+++|+|++..+..
T Consensus       394 ~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~  473 (497)
T KOG0157|consen  394 LISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK  473 (497)
T ss_pred             EEehHHhccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC
Confidence            999999999999996 9999999999976544355689999999999999999999999999999999999999877642


Q ss_pred             CCCCCCCCCCcceecccCCeeeEeeecC
Q 035527          495 IDDLDYDANPGFTQHKKNPLRLAATKFI  522 (522)
Q Consensus       495 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~  522 (522)
                           .......+++|+++++|++++|.
T Consensus       474 -----~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  474 -----PKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             -----ceeeeEEEEEecCCeEEEEEeCC
Confidence                 34556799999999999999983


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=6e-72  Score=559.72  Aligned_cols=455  Identities=29%  Similarity=0.462  Sum_probs=359.3

Q ss_pred             CCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCccccccccC
Q 035527           32 PPGPPGLPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGTQKLSYN  111 (522)
Q Consensus        32 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  111 (522)
                      ||||+++|++||++++...+++..+.+|+++||++|++++|+.++++|+||+++++|+.++...|.+++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999999885566889999999999999999999999999999999999999888888777644333322222


Q ss_pred             ccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccccccccCC
Q 035527          112 FLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAADDYVSSE  191 (522)
Q Consensus       112 ~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~  191 (522)
                      +..+....+|+.|+.+||.+..++++...++.+.+.+.+.+.                 .+++.+.....      ...+
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~-----------------~~~~~l~~~~~------~~~~  137 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIE-----------------NMLSGLHALVK------DDPH  137 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHH-----------------HHHHHHHhhcc------ccCC
Confidence            222344456899999999887888998888999998888888                 88887765421      1135


Q ss_pred             CccchHHHHHHHHHHHHHHHhcCccccccchhHH-------HhHHHHHHHHHHhhccccccccccccchhhhhhhhhHHH
Q 035527          192 APINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAV-------SRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNRR  264 (522)
Q Consensus       192 ~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~  264 (522)
                      +++|+.+.+..+++++++.++||.+++....+..       ..+...+...+.......+...+|+++ |++. ....+.
T Consensus       138 ~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~-~~~~-~~~~~~  215 (466)
T PLN02655        138 SPVNFRDVFENELFGLSLIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLS-WIPN-KSFETR  215 (466)
T ss_pred             CceeHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhh-hcCc-hhHHHH
Confidence            6799999999999999999999998765321101       112222333333332223345666544 4432 112233


Q ss_pred             HHhhhhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchHHHHHHHHHHHh
Q 035527          265 LRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIKVTLEWAMTNLM  343 (522)
Q Consensus       265 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~~~l~~~l~~L~  343 (522)
                      ..+....+.++++++++++++....+.. ..|+++.+++..    ..++++++.+++.+ ++||+|||+++++|++++|+
T Consensus       216 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~d~l~~ll~~~----~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~  290 (466)
T PLN02655        216 VQTTEFRRTAVMKALIKQQKKRIARGEE-RDCYLDFLLSEA----THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELA  290 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCC-cccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333445567788888776654322222 468999999764    25899999999999 99999999999999999999


Q ss_pred             hCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCC-CCcccccccceeecEEeCCCcEEEEechhh
Q 035527          344 KNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQ-FLPRETTERCVIDGYHIPAKTTVFVNVLAI  422 (522)
Q Consensus       344 ~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~  422 (522)
                      +||++|+++|+||+++++.+. ++.++++++|||+|||+||||++|+++ ..+|.+.+|++++|+.||||+.|+++.+++
T Consensus       291 ~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~  369 (466)
T PLN02655        291 KNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGC  369 (466)
T ss_pred             cCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHh
Confidence            999999999999999988654 899999999999999999999999999 457999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCCCCCCCCCCC
Q 035527          423 GRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGMEIDDLDYDA  502 (522)
Q Consensus       423 ~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~  502 (522)
                      ||||++|+||++|+||||++.+.. ......++|||+|+|.|+|++||+.|+++++++||++|+|++.++.. .   ...
T Consensus       370 ~~d~~~~~~p~~F~PeR~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~---~~~  444 (466)
T PLN02655        370 NMDKKRWENPEEWDPERFLGEKYE-SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-E---KED  444 (466)
T ss_pred             cCCcccCCChhccCccccCCCCcc-cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-c---ccc
Confidence            999999999999999999975422 12347899999999999999999999999999999999999876642 1   123


Q ss_pred             CCcceecccCCeeeEeeecC
Q 035527          503 NPGFTQHKKNPLRLAATKFI  522 (522)
Q Consensus       503 ~~~~~~~~~~~~~~~~~~r~  522 (522)
                      ..+++..+++++.+++++|.
T Consensus       445 ~~~~~~~~~~~~~~~~~~r~  464 (466)
T PLN02655        445 TVQLTTQKLHPLHAHLKPRG  464 (466)
T ss_pred             hhheeEeecCCcEEEEeecC
Confidence            45778889999999998884


No 15 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=2.7e-72  Score=570.49  Aligned_cols=449  Identities=24%  Similarity=0.378  Sum_probs=349.7

Q ss_pred             CCCCCCCCCCCcccccccCCCC------------------CChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHH
Q 035527           28 RAKLPPGPPGLPLIGNLHQLDA------------------TNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAF   89 (522)
Q Consensus        28 ~~~~ppgp~~~p~~G~~~~~~~------------------~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~   89 (522)
                      ..+.||||+++|++||++.+..                  .+....+.+|+++||++|++++|+.+.++++||+++++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            5567999999999999877621                  1222346789999999999999999999999999999999


Q ss_pred             HhCCcccccCCCCccccccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhH
Q 035527           90 KTHDLQFSSRPALSGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQK  169 (522)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (522)
                      .++. .+..++...........+.+ ++..+|+.|+++||.+ .+.|+...++.+.+.+.+++.                
T Consensus       120 ~~~~-~~~~r~~~~~~~~~~~~g~~-l~~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~----------------  180 (516)
T PLN02290        120 TKYN-TVTGKSWLQQQGTKHFIGRG-LLMANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTK----------------  180 (516)
T ss_pred             hcCC-CCCCCcchhhhHHHHHhcCC-ccccCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHH----------------
Confidence            8763 34334322111001111233 4556799999999997 799999999999999999999                


Q ss_pred             HHHHHHHhhccccccccccc-CCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccccccccc
Q 035527          170 KIYISKLSAAPAAAADDYVS-SEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCL  248 (522)
Q Consensus       170 ~~l~~~l~~~~~~~~~~~~~-~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (522)
                       .+++.|...        .. ++.++|+.+.+..+++++++.++||.++...     .++.+.+...............+
T Consensus       181 -~l~~~l~~~--------~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  246 (516)
T PLN02290        181 -QMLQSLQKA--------VESGQTEVEIGEYMTRLTADIISRTEFDSSYEKG-----KQIFHLLTVLQRLCAQATRHLCF  246 (516)
T ss_pred             -HHHHHHHHH--------HhcCCceEEhHHHHHHHHHHHHHHHHcCCccccc-----hHHHHHHHHHHHHHHHhhhhhcC
Confidence             999999764        22 2357999999999999999999999987542     12222222222211111111123


Q ss_pred             cccchhhhhhhhhHHHHHhhhhhHHHHHHHHHHhhcCCCCCC--ccccccHHHHHHHhcccc---CCccChHHHHHHHHH
Q 035527          249 PFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPK--VAEQEDLIDVLLTEMKIA---DDHQTFDSIKSTIME  323 (522)
Q Consensus       249 p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~l~~ll~~~~~~---~~~~~~~~i~~~~~~  323 (522)
                      |++. +++  .+..++.....+.+.+++.+.|+++++..+.+  .....|+++.+++.....   +..++.+++.+++.+
T Consensus       247 p~~~-~~p--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~  323 (516)
T PLN02290        247 PGSR-FFP--SKYNREIKSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKT  323 (516)
T ss_pred             chhh-hCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHH
Confidence            4332 222  12234555667788888888888876532211  112578999999764421   224788999999999


Q ss_pred             -HHhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCCCCcccccccc
Q 035527          324 -NIAAMDTIKVTLEWAMTNLMKNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERC  402 (522)
Q Consensus       324 -~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~  402 (522)
                       ++||+|||+++++|++++|++||++|+|+|+||+++++.+ .++++++++||||+|||+||||++|+++.++|.+.+|+
T Consensus       324 ~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~  402 (516)
T PLN02290        324 FFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDI  402 (516)
T ss_pred             HHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCe
Confidence             9999999999999999999999999999999999998764 68999999999999999999999999998899999999


Q ss_pred             eeecEEeCCCcEEEEechhhccCCCCC-CCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHH
Q 035527          403 VIDGYHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANL  481 (522)
Q Consensus       403 ~~~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~l  481 (522)
                      +++||.||||+.|.++.+++|+||++| +||++||||||++...   .....|+|||.|+|.|+|++||++|++++++.|
T Consensus       403 ~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~l  479 (516)
T PLN02290        403 KLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAML  479 (516)
T ss_pred             eECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999 8999999999995421   134579999999999999999999999999999


Q ss_pred             HHhceeecCCCCCCCCCCCCCCCcceecccCCeeeEeeec
Q 035527          482 LYKLDWTMPHGMEIDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       482 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      +++|+++++++.+     .....++++.|+++++|++++|
T Consensus       480 l~~f~~~~~~~~~-----~~~~~~~~~~p~~~~~~~~~~~  514 (516)
T PLN02290        480 ISKFSFTISDNYR-----HAPVVVLTIKPKYGVQVCLKPL  514 (516)
T ss_pred             HHhceEeeCCCcc-----cCccceeeecCCCCCeEEEEeC
Confidence            9999999876532     1222358889999999999987


No 16 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=1.6e-71  Score=560.73  Aligned_cols=438  Identities=20%  Similarity=0.311  Sum_probs=335.9

Q ss_pred             ccccCCCCCCCCCCCcccccccCCC----CCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccC
Q 035527           24 RKNTRAKLPPGPPGLPLIGNLHQLD----ATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSR   99 (522)
Q Consensus        24 ~~~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~   99 (522)
                      ...++.+.||||+++|++||++.+.    ...++.++.+++++||++|++++|++++|+++||+++++++.+++..|..+
T Consensus        32 ~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~  111 (490)
T PLN02500         32 PKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECS  111 (490)
T ss_pred             cccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEee
Confidence            3445667899999999999986542    235677889999999999999999999999999999999999877666543


Q ss_pred             CCCccccccccCccceeecCCChhHHHHHHHHHhhcCChHHHHH-hhhhhHHHHHhhhcccccccCCchhHHHHHHHHhh
Q 035527          100 PALSGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQ-FRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSA  178 (522)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  178 (522)
                      ..... ... .+ ...++..+|+.|+.+|+.+ .+.|+...++. +.+.+.+.+.                 .+++.|..
T Consensus       112 ~~~~~-~~~-~g-~~~~~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~-----------------~~~~~~~~  170 (490)
T PLN02500        112 YPRSI-GGI-LG-KWSMLVLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTL-----------------LVLDSWKE  170 (490)
T ss_pred             CchHH-HHH-hC-cccccccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHH-----------------HHHHHhCC
Confidence            22111 111 11 1233445799999999998 68899988876 4566666665                 66665532


Q ss_pred             cccccccccccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccccccccccccchhhhhh
Q 035527          179 APAAAADDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSL  258 (522)
Q Consensus       179 ~~~~~~~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~  258 (522)
                                  +..+|+.+.+..++++++++++||.+.+..  + ...+...+.........  ....+|...      
T Consensus       171 ------------~~~vd~~~~~~~~~~~vi~~~~fg~~~~~~--~-~~~~~~~~~~~~~~~~~--~~~~~p~~~------  227 (490)
T PLN02500        171 ------------NSTFSAQDEAKKFTFNLMAKHIMSMDPGEE--E-TEQLKKEYVTFMKGVVS--APLNFPGTA------  227 (490)
T ss_pred             ------------CCCEEehHHHHHHHHHHHHHHHhCCCCCch--H-HHHHHHHHHHHHhhhhc--chhcCCCcc------
Confidence                        347899999999999999999999875432  1 23333333333222111  111122211      


Q ss_pred             hhhHHHHHhhhhhHHHHHHHHHHhhcCCCCCCc--cccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchHHHH
Q 035527          259 TGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKV--AEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIKVTL  335 (522)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~~~l  335 (522)
                         .++..+..+.+.+++.+.++++++....+.  ....|+++.+++.     ..++++++++++.+ ++||+|||++++
T Consensus       228 ---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~-----~~ls~~~i~~~~~~ll~AG~dTta~tl  299 (490)
T PLN02500        228 ---YRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKH-----SNLSTEQILDLILSLLFAGHETSSVAI  299 (490)
T ss_pred             ---cHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhc-----cCCCHHHHHHHHHHHHHhhhhHHHHHH
Confidence               234445667788888888887765322111  1246899999874     25899999999999 999999999999


Q ss_pred             HHHHHHHhhCcHHHHHHHHHHHHHhc-----cCCCCCCCCCCCchhHHHHHHHHhccCCCCCCCcccccccceeecEEeC
Q 035527          336 EWAMTNLMKNPEAMKKVQKEVRYVVK-----DKGFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCVIDGYHIP  410 (522)
Q Consensus       336 ~~~l~~L~~~p~~~~~lr~Ei~~~~~-----~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~~g~~ip  410 (522)
                      +|++++|++||++|+|+|+|++++.+     .+..++++++++|||++|||+||||++|+++.++|.+.+|++++||.||
T Consensus       300 ~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IP  379 (490)
T PLN02500        300 ALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIP  379 (490)
T ss_pred             HHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEEC
Confidence            99999999999999999999999864     2345899999999999999999999999999888999999999999999


Q ss_pred             CCcEEEEechhhccCCCCCCCCCCCCCCcccCCCCCCC------CCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHh
Q 035527          411 AKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMG------GQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYK  484 (522)
Q Consensus       411 ~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~------~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~  484 (522)
                      ||+.|+++.+++||||++|+||++||||||++++.+.+      ..++.|+|||+|+|.|+|++||++|+++++|+|+++
T Consensus       380 kGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~  459 (490)
T PLN02500        380 SGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLN  459 (490)
T ss_pred             CCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999997542211      245789999999999999999999999999999999


Q ss_pred             ceeecCCCCCCCCCCCCCCCcceecccCCeeeEeee
Q 035527          485 LDWTMPHGMEIDDLDYDANPGFTQHKKNPLRLAATK  520 (522)
Q Consensus       485 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  520 (522)
                      |+|++.++..  +..   .. .+ .+.+++.|++++
T Consensus       460 f~~~~~~~~~--~~~---~~-~~-~~~~~l~~~~~~  488 (490)
T PLN02500        460 FNWELAEADQ--AFA---FP-FV-DFPKGLPIRVRR  488 (490)
T ss_pred             cEEEEcCCCc--cee---cc-cc-cCCCCceEEEEe
Confidence            9999876542  211   11 22 344699999875


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.6e-70  Score=551.88  Aligned_cols=464  Identities=26%  Similarity=0.433  Sum_probs=347.9

Q ss_pred             CCCCCCCCCCCcccccccCCCCCCh-hHHHHHHHHhh-CCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCccc
Q 035527           28 RAKLPPGPPGLPLIGNLHQLDATNL-AFCFWKLSKQY-GPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGT  105 (522)
Q Consensus        28 ~~~~ppgp~~~p~~G~~~~~~~~~~-~~~~~~~~~ky-G~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~  105 (522)
                      ..+.||||+++|++||++++....+ ...+.++.++| |+||++++|++++|+|+||+.+++++.++...|.+++.....
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~  117 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM  117 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh
Confidence            3447999999999999988733222 23466666666 799999999999999999999999999888888888755443


Q ss_pred             cccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhccccccc
Q 035527          106 QKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAAD  185 (522)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  185 (522)
                      ..+..++.++.+..+|+.|+.+|+.+....++......+.+...+++.                 .+++.+...      
T Consensus       118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~-----------------~l~~~l~~~------  174 (534)
T PLN03018        118 ETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEAD-----------------NLIAYIHSM------  174 (534)
T ss_pred             hhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH-----------------HHHHHHHHh------
Confidence            333322334566667999999999985444566556666667666777                 888888753      


Q ss_pred             ccccCCCccchHHHHHHHHHHHHHHHhcCccccccch------hHHHhHHHHHHHHHHhhc---ccccccccc-ccchhh
Q 035527          186 DYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGT------AAVSRLHSVFAETQAMVG---RVFFRDCLP-FVGCWL  255 (522)
Q Consensus       186 ~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~p-~l~~~~  255 (522)
                        ...+.++|+.+.+..+++++++.++||.++.....      +....+...+........   ...+.+.+| ++..+.
T Consensus       175 --~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  252 (534)
T PLN03018        175 --YQRSETVDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWN  252 (534)
T ss_pred             --cccCCceeHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhc
Confidence              23345799999999999999999999998753211      101111111221111111   111112233 222110


Q ss_pred             hhhhhhHHHHHhhhhhHHHHHHHHHHhhcCCCC--CCccccccHHHHHHHhccccCC-ccChHHHHHHHHH-HHhhccch
Q 035527          256 DSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKR--PKVAEQEDLIDVLLTEMKIADD-HQTFDSIKSTIME-NIAAMDTI  331 (522)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~l~~ll~~~~~~~~-~~~~~~i~~~~~~-~~ag~~tt  331 (522)
                        +.+...+.....+.+.+++.++++++++...  .+.....|+++.+++...+.+. .++++++++++.+ ++||+|||
T Consensus       253 --~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTt  330 (534)
T PLN03018        253 --IDGQEERAKVNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNP  330 (534)
T ss_pred             --ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHH
Confidence              0122334444566778888888887764321  1111146899999976543322 4899999999999 99999999


Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCCC-CcccccccceeecEEeC
Q 035527          332 KVTLEWAMTNLMKNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQF-LPRETTERCVIDGYHIP  410 (522)
Q Consensus       332 ~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~-~~R~~~~d~~~~g~~ip  410 (522)
                      +++++|++++|+.||++|+++++||+++++.++.++.+++.+||||+|||+||||++|+++. .+|.+.+|++++||.||
T Consensus       331 a~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~Ip  410 (534)
T PLN03018        331 ANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIP  410 (534)
T ss_pred             HHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEEC
Confidence            99999999999999999999999999999877778999999999999999999999999995 47999999999999999


Q ss_pred             CCcEEEEechhhccCCCCCCCCCCCCCCcccCCCCCC-----CCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhc
Q 035527          411 AKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDM-----GGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKL  485 (522)
Q Consensus       411 ~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~-----~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f  485 (522)
                      ||+.|.++.+++|+||++|+||++|+||||++.+...     ...+..|+|||+|+|.|+|++||.+|+++++|+|+++|
T Consensus       411 kGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f  490 (534)
T PLN03018        411 KGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGF  490 (534)
T ss_pred             CCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999753211     12456899999999999999999999999999999999


Q ss_pred             eeecCCCCCCCCCCCCCCCcceecccCCeeeEeeec
Q 035527          486 DWTMPHGMEIDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      +|++.++.  .+++.....+.+.. +.++.|++++|
T Consensus       491 ~~~~~~~~--~~~~~~~~~~~~~~-p~~~~v~~~~R  523 (534)
T PLN03018        491 NWKLHQDF--GPLSLEEDDASLLM-AKPLLLSVEPR  523 (534)
T ss_pred             eEEeCCCC--CCCCccccccceec-CCCeEEEEEec
Confidence            99987653  13333333455544 46999999998


No 18 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.1e-70  Score=548.10  Aligned_cols=446  Identities=18%  Similarity=0.233  Sum_probs=344.6

Q ss_pred             HHHHHHHHHHhhhccccCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHH
Q 035527           11 CLPIFLLFLLQKHRKNTRAKLPPGPPGLPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFK   90 (522)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~   90 (522)
                      .+++++...++...+..+++.||||+++|++||++.+ ..++..++.+++++||++|+++++++++++++||+.+++++.
T Consensus        12 ~~~~~~~~~~~~~~~~~r~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~   90 (463)
T PLN02774         12 IVCLCSALLRWNEVRYSKKGLPPGTMGWPLFGETTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILM   90 (463)
T ss_pred             HHHHHHHHHHHHhhccCCCCCCCCCCCCCchhhHHHH-HHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHc
Confidence            3333333333333334556788999999999999887 555677899999999999999999999999999999999998


Q ss_pred             hCCcccccCCCCccccccccCccceeecCCChhHHHHHHHHHhhcCChHHHHH-hhhhhHHHHHhhhcccccccCCchhH
Q 035527           91 THDLQFSSRPALSGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQ-FRQVQTEEIFLGAQYGRRKSDGLNQK  169 (522)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (522)
                      ++...|..+....... . .+ .+.+++.+|+.|+.+|+.+ .+.|+...++. +.+.+.+.+.                
T Consensus        91 ~~~~~~~~~~~~~~~~-~-lg-~~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~----------------  150 (463)
T PLN02774         91 NEGKGLVPGYPQSMLD-I-LG-TCNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMR----------------  150 (463)
T ss_pred             CCCCeEEecCCHHHHH-H-hC-ccchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHH----------------
Confidence            7766664332211111 1 12 2334455799999999998 78899998875 6888887777                


Q ss_pred             HHHHHHHhhcccccccccccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhcccccccccc
Q 035527          170 KIYISKLSAAPAAAADDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCLP  249 (522)
Q Consensus       170 ~~l~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  249 (522)
                       ++++.|..            ++++|+.+.+..+++++++.++||......    ..++.+.+.....  ........+|
T Consensus       151 -~~~~~~~~------------~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~--~~~~~~~~lp  211 (463)
T PLN02774        151 -SHLSGWDG------------LKTIDIQEKTKEMALLSALKQIAGTLSKPI----SEEFKTEFFKLVL--GTLSLPIDLP  211 (463)
T ss_pred             -HHHHhhCC------------CCCEEeeHHHHHHHHHHHHHHHcCCCChHH----HHHHHHHHHHHhc--ccccCCcCCC
Confidence             77776642            257999999999999999999999865321    2233333322211  1111111112


Q ss_pred             ccchhhhhhhhhHHHHHhhhhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhc
Q 035527          250 FVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAM  328 (522)
Q Consensus       250 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~  328 (522)
                      .         ...++..++.+.+.+++.+.++++.+...   . .+|+++.+++... .+..++++++.+++.+ ++||+
T Consensus       212 ~---------~~~~~~~~~~~~~~~~~~~~i~~r~~~~~---~-~~d~l~~ll~~~~-~~~~~s~~ei~~~~~~ll~Ag~  277 (463)
T PLN02774        212 G---------TNYRSGVQARKNIVRMLRQLIQERRASGE---T-HTDMLGYLMRKEG-NRYKLTDEEIIDQIITILYSGY  277 (463)
T ss_pred             C---------hhhhHHHHHHHHHHHHHHHHHHHHHhcCC---C-cccHHHHHHhCcc-CCCCCCHHHHHHHHHHHHHhcc
Confidence            1         11244556778888999999988765421   2 5799999987432 2235899999999999 99999


Q ss_pred             cchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcc---CCCCCCCCCCCchhHHHHHHHHhccCCCCCCCcccccccceee
Q 035527          329 DTIKVTLEWAMTNLMKNPEAMKKVQKEVRYVVKD---KGFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCVID  405 (522)
Q Consensus       329 ~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~~  405 (522)
                      |||+++++|++++|++||++|+++++|++++.+.   +..++++++++||||+|||+|+||++|+++.++|.+.+|++++
T Consensus       278 dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~  357 (463)
T PLN02774        278 ETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELN  357 (463)
T ss_pred             hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeEC
Confidence            9999999999999999999999999999999753   3468899999999999999999999999998889999999999


Q ss_pred             cEEeCCCcEEEEechhhccCCCCCCCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhc
Q 035527          406 GYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKL  485 (522)
Q Consensus       406 g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f  485 (522)
                      ||.||||+.|+++.+.+|+||++|+||++|+||||++.+.  +. ...|+|||+|+|.|+|++||++|+++++|.|+++|
T Consensus       358 g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~--~~-~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f  434 (463)
T PLN02774        358 GYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL--ES-HNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRY  434 (463)
T ss_pred             CEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc--CC-CccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999996532  11 23699999999999999999999999999999999


Q ss_pred             eeecCCCCCCCCCCCCCCCcceecccCCeeeEeee
Q 035527          486 DWTMPHGMEIDDLDYDANPGFTQHKKNPLRLAATK  520 (522)
Q Consensus       486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  520 (522)
                      +|++.++.+  ..   ..  .++.|++++.|++++
T Consensus       435 ~~~~~~~~~--~~---~~--~~~~p~~g~~~~~~~  462 (463)
T PLN02774        435 RWEEVGGDK--LM---KF--PRVEAPNGLHIRVSP  462 (463)
T ss_pred             eEEECCCCc--cc---cC--CCCCCCCCceEEeee
Confidence            999976632  11   11  234478899999874


No 19 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.2e-71  Score=563.08  Aligned_cols=453  Identities=31%  Similarity=0.499  Sum_probs=363.7

Q ss_pred             CCCCCCCcccccccCCC-CCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCccccc--c
Q 035527           32 PPGPPGLPLIGNLHQLD-ATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGTQK--L  108 (522)
Q Consensus        32 ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~--~  108 (522)
                      ||||+++|++||++.+. .++++.++.++++|||+||+++++++++++|+||+++++|+.++...+..++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999984 37888889999999999999999999999999999999999987766665533222221  1


Q ss_pred             ccCccceeecCCChhHHHHHHHHHhhcCChH-HHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhccccccccc
Q 035527          109 SYNFLGLTLTPHYNSWREMKKKFVTHILSAN-RTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAADDY  187 (522)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  187 (522)
                      ...+.+ ++..+++.|+.+|+.+ .+.|+.. .+ .+.+.+.+.++                 .+++.|...        
T Consensus        81 ~~~~~~-l~~~~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~-----------------~l~~~l~~~--------  132 (463)
T PF00067_consen   81 PFGGKG-LFFSDGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAE-----------------ELIDQLRKK--------  132 (463)
T ss_dssp             HHTTTS-STTSSHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHH-----------------HHHHHHHHT--------
T ss_pred             cccccc-cccccccccccccccc-cccccccccc-ccccccccccc-----------------ccccccccc--------
Confidence            122333 3445579999999998 6777777 66 89999999999                 999999886        


Q ss_pred             ccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccc--cccccccccchhhhhhhhhHHHH
Q 035527          188 VSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRV--FFRDCLPFVGCWLDSLTGWNRRL  265 (522)
Q Consensus       188 ~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~  265 (522)
                      ......+|+.+++..+++++++.++||.+++....+....+.+.+......+...  .+...+|++. ++.  ....+..
T Consensus       133 ~~~~~~vd~~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~--~~~~~~~  209 (463)
T PF00067_consen  133 AGSSGPVDLFDWLRRFALDVIGRVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLK-YLP--TPLFRRF  209 (463)
T ss_dssp             TTSESEEEHHHHHHHHHHHHHHHHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-TSS--HHHHHHH
T ss_pred             ccccceeeeecccccccccccccccccceeeeccccccccccccccccccccccccccccccccccc-ccc--ccccccc
Confidence            3444479999999999999999999999987543332445666666665544221  1233445433 221  2344566


Q ss_pred             HhhhhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhc-cccC-CccChHHHHHHHHH-HHhhccchHHHHHHHHHHH
Q 035527          266 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEM-KIAD-DHQTFDSIKSTIME-NIAAMDTIKVTLEWAMTNL  342 (522)
Q Consensus       266 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~-~~~~-~~~~~~~i~~~~~~-~~ag~~tt~~~l~~~l~~L  342 (522)
                      .+..+.+.+++.+.++++++....+.....|+++.+++.. ...+ ..++.+++.++++. ++||+|||+++++|++++|
T Consensus       210 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L  289 (463)
T PF00067_consen  210 KRARDRLRKYIKEIIEERREELDDGDESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYEL  289 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSHHSSSSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            6677888999999999887765443223689999999886 3333 38999999999999 9999999999999999999


Q ss_pred             hhCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCC-CCcccccccceeecEEeCCCcEEEEechh
Q 035527          343 MKNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQ-FLPRETTERCVIDGYHIPAKTTVFVNVLA  421 (522)
Q Consensus       343 ~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~-~~~R~~~~d~~~~g~~ip~G~~v~~~~~~  421 (522)
                      ++||++|+++++||+++.++++.++.+++++||||+|||+||||++|+++ .++|.+.+|++++||.||||+.|+++.++
T Consensus       290 ~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~  369 (463)
T PF00067_consen  290 AKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYA  369 (463)
T ss_dssp             HHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999977678899999999999999999999999999 89999999999999999999999999999


Q ss_pred             hccCCCCCCCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCCCCCCCCCC
Q 035527          422 IGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGMEIDDLDYD  501 (522)
Q Consensus       422 ~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~  501 (522)
                      +|+||++|+||++|+||||++.+.........|+|||.|+|.|+|++||++|+++++|+||++|||++.++....+ ...
T Consensus       370 ~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~-~~~  448 (463)
T PF00067_consen  370 LHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEP-QEQ  448 (463)
T ss_dssp             HTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGE-EEC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCC-ccc
Confidence            9999999999999999999987652234678999999999999999999999999999999999999976643222 222


Q ss_pred             CCCcceecccCCeeeEe
Q 035527          502 ANPGFTQHKKNPLRLAA  518 (522)
Q Consensus       502 ~~~~~~~~~~~~~~~~~  518 (522)
                      .. +++ .|+.++.|.|
T Consensus       449 ~~-~~~-~~~~~~~~~~  463 (463)
T PF00067_consen  449 QN-GFL-LPPKPLKVKF  463 (463)
T ss_dssp             SC-SSS-EEESSSEEEE
T ss_pred             cC-ceE-eeCCCcEEeC
Confidence            22 444 4555777765


No 20 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.2e-70  Score=513.31  Aligned_cols=454  Identities=22%  Similarity=0.337  Sum_probs=372.3

Q ss_pred             CCCCCCCCCCCccccccc---CCCCCChhHHHHHHHHhhCCeEEEe-ecCeeEEEecCHHHHHHHHHhCCcccccCC-CC
Q 035527           28 RAKLPPGPPGLPLIGNLH---QLDATNLAFCFWKLSKQYGPIFSLR-LGFRPTIVISSAKLAKEAFKTHDLQFSSRP-AL  102 (522)
Q Consensus        28 ~~~~ppgp~~~p~~G~~~---~~~~~~~~~~~~~~~~kyG~v~~~~-~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~-~~  102 (522)
                      +...+|+|+++|++|.+.   .....+.++.....++|||+||+.. +|+...|.+.+|+.++.+++..+ .++.|+ ..
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~  126 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLI  126 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCccccc
Confidence            445679999999999998   3335688888899999999999999 89999999999999999998654 445554 21


Q ss_pred             cccc--ccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcc
Q 035527          103 SGTQ--KLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAP  180 (522)
Q Consensus       103 ~~~~--~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  180 (522)
                      ..+.  .-.+++...++..+|+.|.+.|..++...+.++..+.|.+.+++.++                 ++++.+....
T Consensus       127 ~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~-----------------DF~~~l~~~r  189 (519)
T KOG0159|consen  127 EPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSD-----------------DFVERLRAQR  189 (519)
T ss_pred             chhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHH-----------------HHHHHHHHHh
Confidence            1111  11233455667778999999999999999999999999999999999                 9999998874


Q ss_pred             cccccccccCCCccchHHHHHHHHHHHHHHHhcCccccccch---hHHHhHHHHHHHHHHhhccccccccccccchhhhh
Q 035527          181 AAAADDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGT---AAVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDS  257 (522)
Q Consensus       181 ~~~~~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~  257 (522)
                      +.     ..+..+.|+.+.+..++++.++.++||.+.+....   +..+.+++++..++.....+   ...|-+.+++. 
T Consensus       190 ~~-----~~~~~~~D~~~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l---~~~p~l~r~~~-  260 (519)
T KOG0159|consen  190 DP-----ERGELVPDFAQELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQL---MLMPSLWRYFP-  260 (519)
T ss_pred             cc-----cccccchhHHHHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHH---HhcchHHHhCC-
Confidence            22     23456889999999999999999999999987633   33667777777777655432   23343333443 


Q ss_pred             hhhhHHHHHhhhhhHHHHHHHHHHhhcCCCCCCc----cccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchH
Q 035527          258 LTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKV----AEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIK  332 (522)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~  332 (522)
                       ++.++++.++.+.+.++...+|++..++.+.+.    +....+...+.+.      .++.+++...+++ +.||.||||
T Consensus       261 -t~~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~~------~l~~k~~~~~~~dll~aGvDTTs  333 (519)
T KOG0159|consen  261 -TKVWKDFVRAWDQIFDVGDKYIDNALEELEKQDSAGSEYTGSLLELLLRK------ELSRKDAKANVMDLLAAGVDTTS  333 (519)
T ss_pred             -ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHc------cCCHHHHHHHHHHHHHHhccchH
Confidence             355677778888887777777776654432211    1122344444432      6888999999999 999999999


Q ss_pred             HHHHHHHHHHhhCcHHHHHHHHHHHHHhcc-CCCCCCCCCCCchhHHHHHHHHhccCCCCCCCcccccccceeecEEeCC
Q 035527          333 VTLEWAMTNLMKNPEAMKKVQKEVRYVVKD-KGFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCVIDGYHIPA  411 (522)
Q Consensus       333 ~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~~g~~ip~  411 (522)
                      ++++|+||+|++||++|++|++|+.+++++ +..++.+++.++|||.||||||+||||++++..|...+|.+++||.|||
T Consensus       334 ~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPa  413 (519)
T KOG0159|consen  334 NTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPA  413 (519)
T ss_pred             HHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecC
Confidence            999999999999999999999999999987 6788999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEechhhccCCCCCCCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCC
Q 035527          412 KTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPH  491 (522)
Q Consensus       412 G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~  491 (522)
                      ||.|.++.+...+||++|++|++|+|||||+++. ...++..++|||.|+|+|+|+++|++|+.+.||+|+++|+++..+
T Consensus       414 gT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~  492 (519)
T KOG0159|consen  414 GTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLH  492 (519)
T ss_pred             CCeEEEeehhhccChhhCCCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecC
Confidence            9999999999999999999999999999998763 355889999999999999999999999999999999999999877


Q ss_pred             CCCCCCCCCCCCCcceecccCCeeeEeeec
Q 035527          492 GMEIDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      +.   |  ....+.+++.|..++.++|++|
T Consensus       493 ~~---p--v~~~~~~il~P~~~l~f~f~~r  517 (519)
T KOG0159|consen  493 EE---P--VEYVYRFILVPNRPLRFKFRPR  517 (519)
T ss_pred             CC---C--ccceeEEEEcCCCCcceeeeeC
Confidence            53   4  3344568888999999999987


No 21 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=9.8e-70  Score=495.93  Aligned_cols=444  Identities=22%  Similarity=0.311  Sum_probs=352.8

Q ss_pred             CCCCCCCC-CcccccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCcccccc
Q 035527           30 KLPPGPPG-LPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGTQKL  108 (522)
Q Consensus        30 ~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~  108 (522)
                      ..||..++ +|++|++..| ++++..++++.++|||+||++.++|+.+.++.+|+....+++.+...++...........
T Consensus        31 ~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~  109 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTP  109 (486)
T ss_pred             CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhh
Confidence            56677765 8999999999 999999999999999999999999999999999999999998764444332221111111


Q ss_pred             ccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccccccc
Q 035527          109 SYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAADDYV  188 (522)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  188 (522)
                      .+ +.+......+...-++.+.+ ...+....++++.+.+.+++.                 ++++.  ..        .
T Consensus       110 vF-g~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~-----------------~~f~~--~~--------~  160 (486)
T KOG0684|consen  110 VF-GKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELH-----------------AYFET--SL--------G  160 (486)
T ss_pred             hc-CCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHH-----------------HHHhc--cc--------c
Confidence            11 23454444455666666676 888999999999999999888                 77766  11        2


Q ss_pred             cCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccccccccccccchhhhhhhhhHHHHHhh
Q 035527          189 SSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNRRLRNN  268 (522)
Q Consensus       189 ~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~  268 (522)
                      ++|.+..+.++...+++.+...++||......+.+ ...+...++..+.....     .||.   +++  ....++..++
T Consensus       161 ~s~~~d~l~~~~~~ii~tAs~~ll~~e~r~~~d~~-~a~l~~dLd~~F~~~d~-----~FP~---~LP--~~~~r~~~ra  229 (486)
T KOG0684|consen  161 ESGETDGLYTFCRLIIFTASRLLLGGEVRDQLDAD-VAKLYHDLDQGFQPFDF-----LFPY---NLP--IPLLRRRDRA  229 (486)
T ss_pred             cccchhHhhhhhHHHhhhhHHHhhhhhhhhhhcch-HHHHHHHHhccccchHh-----hccc---CCC--cchhhhHHHH
Confidence            35667778888888888888888888765543333 34444444444433332     2331   111  1234566688


Q ss_pred             hhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchHHHHHHHHHHHhhCcH
Q 035527          269 FSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIKVTLEWAMTNLMKNPE  347 (522)
Q Consensus       269 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~~~l~~~l~~L~~~p~  347 (522)
                      ++++.+.+...|.++++..+.  . ..|+++.+++ .-.++.+.+++|++..++. +|||+.||++|.+|++++|++|||
T Consensus       230 ~~~i~k~f~~~i~~rr~s~s~--~-~~dmlq~l~~-~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe  305 (486)
T KOG0684|consen  230 RKKISKIFSKIILDRRASISK--W-DNDMLQSLME-KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPE  305 (486)
T ss_pred             HHHHHHHHHHHHHHHHhcccc--c-cHHHHHHHHH-HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHH
Confidence            999999999999998876432  1 5689999988 3334468999999999999 999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCC-CCCCCCCCchhHHHHHHHHhccCCCCCCCcccccccceeec----EEeCCCcEEEEechhh
Q 035527          348 AMKKVQKEVRYVVKDKGF-VDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCVIDG----YHIPAKTTVFVNVLAI  422 (522)
Q Consensus       348 ~~~~lr~Ei~~~~~~~~~-~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~~g----~~ip~G~~v~~~~~~~  422 (522)
                      +++.+++|+++++++++. ++.+.+++||+|++||+|||||+||.+.+.|.+.+|+++.+    |.||+|..|.+++..+
T Consensus       306 ~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~  385 (486)
T KOG0684|consen  306 AQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLL  385 (486)
T ss_pred             HHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccc
Confidence            999999999999988765 99999999999999999999999999999999999999966    9999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCcccCCCCCCC--C--CCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCCCCCCC
Q 035527          423 GRDGQVWDKPDEFIPERFVGSNIDMG--G--QNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGMEIDDL  498 (522)
Q Consensus       423 ~~d~~~~~dp~~F~P~R~l~~~~~~~--~--~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~  498 (522)
                      |+||++|+||+.|+|+||++++.+.+  +  -.+.++|||+|.|.|||+.||.+|+|.++..+|++||+++.++ +.+++
T Consensus       386 hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~  464 (486)
T KOG0684|consen  386 HRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEV  464 (486)
T ss_pred             cCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCC
Confidence            99999999999999999997765431  2  2245699999999999999999999999999999999999987 33444


Q ss_pred             CCCCCCcceecccCCeeeEeeecC
Q 035527          499 DYDANPGFTQHKKNPLRLAATKFI  522 (522)
Q Consensus       499 ~~~~~~~~~~~~~~~~~~~~~~r~  522 (522)
                      ++.   ..++.|..+|.|+++.|+
T Consensus       465 d~s---~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  465 DYS---RMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             CHH---HhhcCCCCCceEEEeecC
Confidence            443   348899999999999985


No 22 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=2.8e-69  Score=542.59  Aligned_cols=449  Identities=18%  Similarity=0.284  Sum_probs=336.7

Q ss_pred             CCCCCCCCcccccccCCCCC--ChhHHHHHHHHhhCCeEE---EeecCeeEEEecCHHHHHHHHHhCCcccccCCCCccc
Q 035527           31 LPPGPPGLPLIGNLHQLDAT--NLAFCFWKLSKQYGPIFS---LRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGT  105 (522)
Q Consensus        31 ~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~kyG~v~~---~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~  105 (522)
                      ..|||+++|++||+..+..+  ....++.+...+||..++   .++|+.++++|+||+++++|+.++...|.+++.....
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            46889999999999766322  223333344445786655   6789999999999999999998876666665432221


Q ss_pred             cccccCccceeecCCChhHHHHHHHHHhhcCChHHHHH--hhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhccccc
Q 035527          106 QKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQ--FRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAA  183 (522)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  183 (522)
                      ..  ..+.++ +..+|+.|+.+||.+ .+.|+...+..  +.+.+.+.++                 .+++.+...    
T Consensus       112 ~~--~~g~gl-~~~~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~-----------------~l~~~l~~~----  166 (500)
T PLN02169        112 FD--VLGEGI-LTVDFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKE-----------------GLVPFLDNA----  166 (500)
T ss_pred             HH--hhcCcc-cccCcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHH-----------------HHHHHHHHH----
Confidence            11  123344 445699999999998 79999887764  2355666666                 777777654    


Q ss_pred             ccccccCCCccchHHHHHHHHHHHHHHHhcCccccccchh-HHHhHHHHHHHHHHhhccccccccccccch-hhhhh-hh
Q 035527          184 ADDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTA-AVSRLHSVFAETQAMVGRVFFRDCLPFVGC-WLDSL-TG  260 (522)
Q Consensus       184 ~~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~~~~-~~  260 (522)
                          ..+++++|+.+.+..+++++++.++||.+.+....+ ....+.+.+........   .....|++.. +..++ .+
T Consensus       167 ----~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~  239 (500)
T PLN02169        167 ----AHENIIIDLQDVFMRFMFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIG  239 (500)
T ss_pred             ----HhcCCeEeHHHHHHHHHHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCc
Confidence                334568999999999999999999999977543211 01233333333222111   1122232210 11111 23


Q ss_pred             hHHHHHhhhhhHHHHHHHHHHhhcCCCC-C--CccccccHHHHHHHhcccc---CCccChHHHHHHHHH-HHhhccchHH
Q 035527          261 WNRRLRNNFSDCDKVYQQLIEDHLDPKR-P--KVAEQEDLIDVLLTEMKIA---DDHQTFDSIKSTIME-NIAAMDTIKV  333 (522)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~--~~~~~~~~l~~ll~~~~~~---~~~~~~~~i~~~~~~-~~ag~~tt~~  333 (522)
                      ..++..+..+.+.+++.+.|+++++... .  .....+|+++.+++.....   +..++++++.+++.+ ++||+|||++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~  319 (500)
T PLN02169        240 LERKMRTALATVNRMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSS  319 (500)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHH
Confidence            4566778888999999999998765311 1  1111468999998764321   124788899999999 9999999999


Q ss_pred             HHHHHHHHHhhCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCCCCcccccccce-eecEEeCCC
Q 035527          334 TLEWAMTNLMKNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCV-IDGYHIPAK  412 (522)
Q Consensus       334 ~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~-~~g~~ip~G  412 (522)
                      +++|++|+|++||++|+|+++||+++      ++.+++.+||||+|||+||||+||++|...|.+.+|.+ ++|+.||||
T Consensus       320 tl~w~l~~La~~Pevq~kl~~Ei~~v------~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkG  393 (500)
T PLN02169        320 ALTWFFWLLSKHPQVMAKIRHEINTK------FDNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAE  393 (500)
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHhh------CCHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCC
Confidence            99999999999999999999999987      46789999999999999999999999988888777765 499999999


Q ss_pred             cEEEEechhhccCCCCC-CCCCCCCCCcccCCCCCCC-CCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecC
Q 035527          413 TTVFVNVLAIGRDGQVW-DKPDEFIPERFVGSNIDMG-GQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMP  490 (522)
Q Consensus       413 ~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~-~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~  490 (522)
                      +.|.++++++||||++| +||++||||||++.+.+.. ..++.|+|||+|+|.|+|++||++|+++++|.|+++|+|++.
T Consensus       394 t~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~  473 (500)
T PLN02169        394 SKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVI  473 (500)
T ss_pred             CEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEc
Confidence            99999999999999999 8999999999997543321 236789999999999999999999999999999999999987


Q ss_pred             CCCCCCCCCCCCCCcceecccCCeeeEeeecC
Q 035527          491 HGMEIDDLDYDANPGFTQHKKNPLRLAATKFI  522 (522)
Q Consensus       491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  522 (522)
                      ++.   ++  ....+++++|++++.|++++||
T Consensus       474 ~~~---~~--~~~~~~~l~~~~gl~l~l~~~~  500 (500)
T PLN02169        474 EGH---KI--EAIPSILLRMKHGLKVTVTKKI  500 (500)
T ss_pred             CCC---Cc--ccccceEEecCCCEEEEEEeCC
Confidence            543   22  2345688899999999999997


No 23 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.1e-69  Score=550.80  Aligned_cols=453  Identities=22%  Similarity=0.300  Sum_probs=338.6

Q ss_pred             CCCCCCCCcccccccCCCCCChhHHHHHHHHhh---CCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCccccc
Q 035527           31 LPPGPPGLPLIGNLHQLDATNLAFCFWKLSKQY---GPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGTQK  107 (522)
Q Consensus        31 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~  107 (522)
                      .+|||+++|++||++.+. .+ ...+.+|.++|   |++|++++++.+.++++||+.+++|+.++...|.+.+.+.....
T Consensus        31 ~~pgp~~~p~~G~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~  108 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQL-KN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYME  108 (516)
T ss_pred             ccCCCCCCCeecchHHHH-hc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHH
Confidence            368999999999987653 22 23456777777   89999999999999999999999999876455554432211100


Q ss_pred             cccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhh-HHHHHhhhcccccccCCchhHHHHHHHHhhcccccccc
Q 035527          108 LSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQ-TEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAADD  186 (522)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  186 (522)
                      . ..+.+ +++.+|+.|+.+||.+ .+.|+...++.+.+.+ .+.+.                 .+++.+...       
T Consensus       109 ~-~~g~~-l~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~-----------------~l~~~l~~~-------  161 (516)
T PLN03195        109 V-LLGDG-IFNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSL-----------------KLSSILSQA-------  161 (516)
T ss_pred             H-HhcCe-eeccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHH-----------------HHHHHHHHH-------
Confidence            0 11233 4556799999999998 8889999999998875 55565                 666666543       


Q ss_pred             cccCCCccchHHHHHHHHHHHHHHHhcCccccccchhH-HHhHHHHHHHHHHhhccccccccccccchhhhhhhhhHHHH
Q 035527          187 YVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAA-VSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNRRL  265 (522)
Q Consensus       187 ~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~  265 (522)
                       ..+++++|+.+++..+++++++.++||.+++....+. ...+.+.+......... .....++.+..++.  .+..++.
T Consensus       162 -~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~--~~~~~~~  237 (516)
T PLN03195        162 -SFANQVVDMQDLFMRMTLDSICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTL-RFIDPLWKLKKFLN--IGSEALL  237 (516)
T ss_pred             -HhcCCeEcHHHHHHHHHHHHHHHHHhCCCccccccCCCccHHHHHHHHHHHHHHH-HHhcchhhHHHhcc--cchHHHH
Confidence             2345679999999999999999999999886543210 12333333332221100 00001111111111  1122344


Q ss_pred             HhhhhhHHHHHHHHHHhhcCCCCC----CccccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchHHHHHHHHH
Q 035527          266 RNNFSDCDKVYQQLIEDHLDPKRP----KVAEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIKVTLEWAMT  340 (522)
Q Consensus       266 ~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~~~l~~~l~  340 (522)
                      .+..+.+.+++.+.++++++....    ......|+++.+++...+.+..++++++.+++.+ ++||+|||+++++|++|
T Consensus       238 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~  317 (516)
T PLN03195        238 SKSIKVVDDFTYSVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVY  317 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHH
Confidence            556677888888888876543211    1112568999999765433346899999999999 99999999999999999


Q ss_pred             HHhhCcHHHHHHHHHHHHHhcc--------------------CCCCCCCCCCCchhHHHHHHHHhccCCCCCCCcccccc
Q 035527          341 NLMKNPEAMKKVQKEVRYVVKD--------------------KGFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTE  400 (522)
Q Consensus       341 ~L~~~p~~~~~lr~Ei~~~~~~--------------------~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~  400 (522)
                      +|++||++|+|+|+|++++.++                    ++.++++++.+||||+|||+||||++|+++..+|.+.+
T Consensus       318 ~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~  397 (516)
T PLN03195        318 MIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILE  397 (516)
T ss_pred             HHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhcc
Confidence            9999999999999999987642                    24578999999999999999999999999987888877


Q ss_pred             ccee-ecEEeCCCcEEEEechhhccCCCCC-CCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHH
Q 035527          401 RCVI-DGYHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELAL  478 (522)
Q Consensus       401 d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~l  478 (522)
                      |.++ +|+.||||+.|.++.+++||||++| +||++|+||||++.+......++.|+|||+|+|.|+|++||++|+++++
T Consensus       398 d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~l  477 (516)
T PLN03195        398 DDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMAL  477 (516)
T ss_pred             CcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHH
Confidence            7665 9999999999999999999999999 9999999999996432122355689999999999999999999999999


Q ss_pred             HHHHHhceeecCCCCCCCCCCCCCCCcceecccCCeeeEeeec
Q 035527          479 ANLLYKLDWTMPHGMEIDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       479 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      |.|+++|++++.++.   +..  .....++.|+.++.|++++|
T Consensus       478 a~ll~~f~~~~~~~~---~~~--~~~~~~~~~~~~~~v~~~~r  515 (516)
T PLN03195        478 ALLCRFFKFQLVPGH---PVK--YRMMTILSMANGLKVTVSRR  515 (516)
T ss_pred             HHHHHhceeEecCCC---cce--eeeeeEEecCCCEEEEEEeC
Confidence            999999999987553   222  23345678999999999987


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=4e-69  Score=538.39  Aligned_cols=443  Identities=20%  Similarity=0.284  Sum_probs=347.1

Q ss_pred             HHHHHHHHHHhhhccccCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHH
Q 035527           11 CLPIFLLFLLQKHRKNTRAKLPPGPPGLPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFK   90 (522)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~   90 (522)
                      +++++..+....+....+.+.||||+++|++||++++..++++.++.+++++||++|+++++++++++++||+++++++.
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~   95 (463)
T PLN02196         16 FLCLLRFLAGFRRSSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLV   95 (463)
T ss_pred             HHHHHHHHHHhccCCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHh
Confidence            33334444433333345667789998999999998764678888999999999999999999999999999999999998


Q ss_pred             hCCcccccCCCCccccccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHH
Q 035527           91 THDLQFSSRPALSGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKK  170 (522)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (522)
                      ++...|.  +.......... +...++..+|+.|+++||.+ .+.|+.+.++.+.+.+.+.+.                 
T Consensus        96 ~~~~~~~--~~~~~~~~~~~-g~~~l~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~-----------------  154 (463)
T PLN02196         96 TKSHLFK--PTFPASKERML-GKQAIFFHQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQ-----------------  154 (463)
T ss_pred             CCCCccc--ccCchHHHHHc-CcccccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHH-----------------
Confidence            7766553  22221111112 22344556799999999998 688999999999999998888                 


Q ss_pred             HHHHHHhhcccccccccccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccccccccccc
Q 035527          171 IYISKLSAAPAAAADDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCLPF  250 (522)
Q Consensus       171 ~l~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  250 (522)
                      ++++.|.             +.++|+.+++..+++++++.++||.+....    ...+.+.+.......      ..+|+
T Consensus       155 ~~~~~~~-------------~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~----~~~~~~~~~~~~~~~------~~~~~  211 (463)
T PLN02196        155 ESLNSWE-------------GTQINTYQEMKTYTFNVALLSIFGKDEVLY----REDLKRCYYILEKGY------NSMPI  211 (463)
T ss_pred             HHHHcCC-------------CCeEEeHHHHHHHHHHHHHHHHcCCCCchH----HHHHHHHHHHHhcch------hcccc
Confidence            8887663             236899999999999999999999875321    122222222111111      11222


Q ss_pred             cchhhhhhhhhHHHHHhhhhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhcc
Q 035527          251 VGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMD  329 (522)
Q Consensus       251 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~  329 (522)
                      .   ++  ....++..++.+.+.+++.+.|+++.+...   . ..|+++.+++.    +..++++++.++++. ++||+|
T Consensus       212 ~---~p--~~~~~~~~~a~~~~~~~~~~~i~~~~~~~~---~-~~d~l~~ll~~----~~~l~~~ei~~~~~~~~~Ag~d  278 (463)
T PLN02196        212 N---LP--GTLFHKSMKARKELAQILAKILSKRRQNGS---S-HNDLLGSFMGD----KEGLTDEQIADNIIGVIFAARD  278 (463)
T ss_pred             c---CC--CccchHHHHHHHHHHHHHHHHHHHHhhcCC---C-cccHHHHHHhc----CCCCCHHHHHHHHHHHHHhhhH
Confidence            1   10  011245566777888888888888765421   1 57899988853    236899999999999 999999


Q ss_pred             chHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcc---CCCCCCCCCCCchhHHHHHHHHhccCCCCCCCcccccccceeec
Q 035527          330 TIKVTLEWAMTNLMKNPEAMKKVQKEVRYVVKD---KGFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCVIDG  406 (522)
Q Consensus       330 tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~~g  406 (522)
                      ||+++++|++++|++||++|+++++|++++.+.   ++.++.++++++|||+|||+|+||++|+++...|.+.+|++++|
T Consensus       279 Tta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g  358 (463)
T PLN02196        279 TTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEG  358 (463)
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCC
Confidence            999999999999999999999999999998753   35688999999999999999999999999988899999999999


Q ss_pred             EEeCCCcEEEEechhhccCCCCCCCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhce
Q 035527          407 YHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLD  486 (522)
Q Consensus       407 ~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~  486 (522)
                      |.||||+.|+++.+++|+||++|+||++|+||||++..     .+..++|||+|+|.|+|+++|++|+++++|.|+++|+
T Consensus       359 ~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~  433 (463)
T PLN02196        359 YLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYR  433 (463)
T ss_pred             EEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcE
Confidence            99999999999999999999999999999999999632     3568999999999999999999999999999999999


Q ss_pred             eecCCCCCCCCCCCCCCCcceecccCCeeeEeeec
Q 035527          487 WTMPHGMEIDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      |++.++..  ++.    ...+..|++++.|+++..
T Consensus       434 ~~~~~~~~--~~~----~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        434 WSIVGTSN--GIQ----YGPFALPQNGLPIALSRK  462 (463)
T ss_pred             EEEcCCCC--ceE----EcccccCCCCceEEEecC
Confidence            99876431  222    233456888999888753


No 25 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=6.1e-69  Score=547.46  Aligned_cols=441  Identities=21%  Similarity=0.323  Sum_probs=334.3

Q ss_pred             ccccCCCCCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCccccccccCccceeecCCC
Q 035527           42 GNLHQLDATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGTQKLSYNFLGLTLTPHY  121 (522)
Q Consensus        42 G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (522)
                      ||+..+..+.+...+.++++|||+||++++|+.++++|+||+.+++|+.++...|.+++........  .+.+ +++.++
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g~~-l~~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MGKG-LIPADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cCCc-eecCCc
Confidence            3333333466788899999999999999999999999999999999998766666654322111111  1223 445679


Q ss_pred             hhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccccccccCCCccchHHHHH
Q 035527          122 NSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAADDYVSSEAPINLSEIAM  201 (522)
Q Consensus       122 ~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~vd~~~~~~  201 (522)
                      +.|+.+|+.+ .+.|+...+..+.+.+.+.++                 .+++.|...        ..+++++|+.+.+.
T Consensus       220 e~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~-----------------~L~~~L~~~--------~~~g~~vdl~~~~~  273 (633)
T PLN02738        220 EIWRVRRRAI-VPALHQKYVAAMISLFGQASD-----------------RLCQKLDAA--------ASDGEDVEMESLFS  273 (633)
T ss_pred             HHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHH-----------------HHHHHHHHH--------hcCCCcEeHHHHHH
Confidence            9999999998 899999999999999999999                 999999765        34577899999999


Q ss_pred             HHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccccccccccccchhhhhhhhhHHHHHhhhhhHHHHHHHHHH
Q 035527          202 TLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIE  281 (522)
Q Consensus       202 ~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  281 (522)
                      .+++|+|+.++||.+++....+  ..+.+.+................+|..+++..++...++..+..+.+.++..++++
T Consensus       274 ~lt~DVI~~~~FG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~  351 (633)
T PLN02738        274 RLTLDIIGKAVFNYDFDSLSND--TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIA  351 (633)
T ss_pred             HHHHHHHHHHHhCCCccccccc--hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999988753221  12222222222111110011111121111111122223344444555555555544


Q ss_pred             hhcC-------CCCC--CccccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchHHHHHHHHHHHhhCcHHHHH
Q 035527          282 DHLD-------PKRP--KVAEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIKVTLEWAMTNLMKNPEAMKK  351 (522)
Q Consensus       282 ~~~~-------~~~~--~~~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~~~l~~~l~~L~~~p~~~~~  351 (522)
                      .+++       ....  ......++++.|++..    ..++.+++.++++. ++||+|||+.+|+|++|+|++||++|+|
T Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~k  427 (633)
T PLN02738        352 ICKRMVEEEELQFHEEYMNERDPSILHFLLASG----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAK  427 (633)
T ss_pred             HHHHHHhhhcccchhcccccccchHHHHHHHcC----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHH
Confidence            3221       1000  0111457999998652    36889999999999 9999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCCCCcccccccceeecEEeCCCcEEEEechhhccCCCCCCC
Q 035527          352 VQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDK  431 (522)
Q Consensus       352 lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~d  431 (522)
                      ||+|++++++. +.++++++++||||+|||+|+|||||+++.++|.+.+|++++||.||||+.|.++.+.+||||++|+|
T Consensus       428 LreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpd  506 (633)
T PLN02738        428 LQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDD  506 (633)
T ss_pred             HHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCC
Confidence            99999999874 56899999999999999999999999999888999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccCCCC--CCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCCCCCCCCCCCCCcceec
Q 035527          432 PDEFIPERFVGSNI--DMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGMEIDDLDYDANPGFTQH  509 (522)
Q Consensus       432 p~~F~P~R~l~~~~--~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  509 (522)
                      |++|+||||++++.  +.......|+|||.|+|.|+|++||++|++++||.|+++|+|++.++.+  ++  ....++++.
T Consensus       507 P~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~~--~~~~~~~~~  582 (633)
T PLN02738        507 AEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--PV--KMTTGATIH  582 (633)
T ss_pred             ccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--Cc--ccccceEEe
Confidence            99999999985321  1223456899999999999999999999999999999999999976642  32  233467888


Q ss_pred             ccCCeeeEeeecC
Q 035527          510 KKNPLRLAATKFI  522 (522)
Q Consensus       510 ~~~~~~~~~~~r~  522 (522)
                      |++++.|++++|.
T Consensus       583 p~~~l~v~l~~R~  595 (633)
T PLN02738        583 TTEGLKMTVTRRT  595 (633)
T ss_pred             eCCCcEEEEEECC
Confidence            8999999999883


No 26 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.1e-68  Score=531.19  Aligned_cols=461  Identities=19%  Similarity=0.236  Sum_probs=354.0

Q ss_pred             ChhHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCCCCcccccccCCC----CCChhHHHHHHHHhhCCeEEEeecCeeE
Q 035527            1 MALLVLVILFCLPIFLLFLLQKHRKNTRAKLPPGPPGLPLIGNLHQLD----ATNLAFCFWKLSKQYGPIFSLRLGFRPT   76 (522)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~   76 (522)
                      |++...+++.+++..++.+..++.+..+.+.||||.++|++||++.+.    ..++..++.+++++||++|+++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~   80 (472)
T PLN02987          1 MAFSAFLLLLSSLAAIFFLLLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPT   80 (472)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCe
Confidence            677777766666666666666666667778899999999999998762    2457888899999999999999999999


Q ss_pred             EEecCHHHHHHHHHhCCcccccCCCCccccccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhh
Q 035527           77 IVISSAKLAKEAFKTHDLQFSSRPALSGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGA  156 (522)
Q Consensus        77 vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~  156 (522)
                      ++++||+++++++.++...|.+++.......  .++.++ +..+|+.|+++|+.+ ...++.+.++.+..   +++.   
T Consensus        81 vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~--lg~~~l-~~~~g~~wr~~R~~~-~~f~~~~~~~~~~~---~~~~---  150 (472)
T PLN02987         81 VFSADPETNRFILQNEGKLFECSYPGSISNL--LGKHSL-LLMKGNLHKKMHSLT-MSFANSSIIKDHLL---LDID---  150 (472)
T ss_pred             EEEeCHHHHHHHHhCCCceEEecCcHHHHHH--hCcccc-cccCcHHHHHHHHHH-HHhcChHHHHHHHH---HHHH---
Confidence            9999999999999988777755432111111  122234 444799999999997 45545445444321   1222   


Q ss_pred             cccccccCCchhHHHHHHHHhhcccccccccccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHH
Q 035527          157 QYGRRKSDGLNQKKIYISKLSAAPAAAADDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQ  236 (522)
Q Consensus       157 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~  236 (522)
                                    ++++.....        .  .+++++.+.+..++++++++++||.+.+..    ...+.+.+....
T Consensus       151 --------------~~~~~~~~~--------~--~~~v~~~~~~~~~t~~vi~~~~fg~~~~~~----~~~~~~~~~~~~  202 (472)
T PLN02987        151 --------------RLIRFNLDS--------W--SSRVLLMEEAKKITFELTVKQLMSFDPGEW----TESLRKEYVLVI  202 (472)
T ss_pred             --------------HHHHHHHHh--------h--ccceehHHHHHHHHHHHHHHHHcCCCChHH----HHHHHHHHHHHH
Confidence                          332222111        0  136899999999999999999999875432    222222222222


Q ss_pred             HhhccccccccccccchhhhhhhhhHHHHHhhhhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhccccCCccChHH
Q 035527          237 AMVGRVFFRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKIADDHQTFDS  316 (522)
Q Consensus       237 ~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~  316 (522)
                      ...    ....+|++.       +..++..+..+++.+++.+.++++++..+.+....+|+++.+++..    .++++++
T Consensus       203 ~~~----~~~~~p~l~-------~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~----~~~~~~e  267 (472)
T PLN02987        203 EGF----FSVPLPLFS-------TTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLASD----DGFSDEE  267 (472)
T ss_pred             hhh----hcCCCcCCC-------chHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccHHHHHHhcC----CCCCHHH
Confidence            111    122334431       2345667788899999999999887643322222579999999753    2689999


Q ss_pred             HHHHHHH-HHhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhc---cCCCCCCCCCCCchhHHHHHHHHhccCCCCC
Q 035527          317 IKSTIME-NIAAMDTIKVTLEWAMTNLMKNPEAMKKVQKEVRYVVK---DKGFVDEDDLPRLEYLKAVVKETLRFQPAAQ  392 (522)
Q Consensus       317 i~~~~~~-~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~---~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~  392 (522)
                      +.+++.. ++||+|||+++++|++++|++||++|+++++|++++.+   .++.++.+++.+|||++||++|+||++|+++
T Consensus       268 i~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~  347 (472)
T PLN02987        268 IVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIG  347 (472)
T ss_pred             HHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcC
Confidence            9999999 99999999999999999999999999999999999875   2345788999999999999999999999999


Q ss_pred             CCcccccccceeecEEeCCCcEEEEechhhccCCCCCCCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHH
Q 035527          393 FLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMP  472 (522)
Q Consensus       393 ~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~  472 (522)
                      .++|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|+||||++++.. ......++|||+|+|.|+|++||+.
T Consensus       348 ~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~  426 (472)
T PLN02987        348 GIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARV  426 (472)
T ss_pred             CccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHH
Confidence            888999999999999999999999999999999999999999999999975422 2234689999999999999999999


Q ss_pred             HHHHHHHHHHHhceeecCCCCCCCCCCCCCCCcceecccCCeeeEeeecC
Q 035527          473 IVELALANLLYKLDWTMPHGMEIDDLDYDANPGFTQHKKNPLRLAATKFI  522 (522)
Q Consensus       473 ~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  522 (522)
                      |++++++.|+++|+|++.++.   ++..    ..++.|.+++.+++++|.
T Consensus       427 e~~~~la~ll~~f~~~~~~~~---~~~~----~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        427 ALSVFLHRLVTRFSWVPAEQD---KLVF----FPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             HHHHHHHHHHhceEEEECCCC---ceee----cccccCCCCceEEEEecc
Confidence            999999999999999987553   2222    348899999999999984


No 27 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.5e-67  Score=526.42  Aligned_cols=432  Identities=20%  Similarity=0.258  Sum_probs=336.5

Q ss_pred             cCCCCCCCCCCCcccccccCCC----CCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCC
Q 035527           27 TRAKLPPGPPGLPLIGNLHQLD----ATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPAL  102 (522)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~  102 (522)
                      ++++.||||.++|++||++.+.    ..+++.++.+++++||+||++++++.+.+|++||+++++++.+++..|..+...
T Consensus         4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~   83 (452)
T PLN03141          4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK   83 (452)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch
Confidence            4566789999999999998762    246888899999999999999999999999999999999999877766644321


Q ss_pred             ccccccccCccceeecCCChhHHHHHHHHHhhcCChHHHHH-hhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhccc
Q 035527          103 SGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQ-FRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPA  181 (522)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  181 (522)
                       ......  +.+.++..+|+.|+++|+.+ .+.|+...+.. ..+.+.+.+.                 .+++.+.    
T Consensus        84 -~~~~l~--g~~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~-----------------~~~~~~~----  138 (452)
T PLN03141         84 -SLTELM--GKSSILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVS-----------------ESLDSWR----  138 (452)
T ss_pred             -hHHHHh--CcccccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHH-----------------HHHHhcc----
Confidence             111111  22334556799999999997 67787766654 3444444444                 4444331    


Q ss_pred             ccccccccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccccccccccccchhhhhhhhh
Q 035527          182 AAADDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGW  261 (522)
Q Consensus       182 ~~~~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~  261 (522)
                              .+.++|+.+.+..++++++++++||.+.+.   + ..++.+.+..+......  +...+|..         .
T Consensus       139 --------~~~~~~~~~~~~~~~~~vi~~~~~G~~~~~---~-~~~~~~~~~~~~~~~~~--~~~~~p~~---------~  195 (452)
T PLN03141        139 --------DDPPVLVQDETKKIAFEVLVKALISLEPGE---E-MEFLKKEFQEFIKGLMS--LPIKLPGT---------R  195 (452)
T ss_pred             --------CCCCEEhHHHHHHHHHHHHHHHHcCCCchH---H-HHHHHHHHHHHhhhHHh--CccCCCch---------H
Confidence                    345789999999999999999999986543   2 33333333333322111  11112211         1


Q ss_pred             HHHHHhhhhhHHHHHHHHHHhhcCCCCCCc----cccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchHHHHH
Q 035527          262 NRRLRNNFSDCDKVYQQLIEDHLDPKRPKV----AEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIKVTLE  336 (522)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~~~l~  336 (522)
                      .++..+..+++.+++...|+++++..+.+.    ....|+++.+++..   +..+++++++.++.. ++||+|||+++++
T Consensus       196 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~---~~~l~~~~i~~~~~~ll~Ag~dTts~tl~  272 (452)
T PLN03141        196 LYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRDG---SDELTDDLISDNMIDMMIPGEDSVPVLMT  272 (452)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhcC---CCCCCHHHHHHHHHHHHHhcchhHHHHHH
Confidence            133445678888899988888765432211    11368999998754   236899999999999 9999999999999


Q ss_pred             HHHHHHhhCcHHHHHHHHHHHHHhc----cCCCCCCCCCCCchhHHHHHHHHhccCCCCCCCcccccccceeecEEeCCC
Q 035527          337 WAMTNLMKNPEAMKKVQKEVRYVVK----DKGFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCVIDGYHIPAK  412 (522)
Q Consensus       337 ~~l~~L~~~p~~~~~lr~Ei~~~~~----~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~~g~~ip~G  412 (522)
                      |++++|++||++|+++++|++++.+    .+..++.+++.+||||+|||+|+||++|++++++|.+.+|++++||.||||
T Consensus       273 ~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG  352 (452)
T PLN03141        273 LAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKG  352 (452)
T ss_pred             HHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCC
Confidence            9999999999999999999998763    234578899999999999999999999999988999999999999999999


Q ss_pred             cEEEEechhhccCCCCCCCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCC
Q 035527          413 TTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHG  492 (522)
Q Consensus       413 ~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~  492 (522)
                      +.|.++.+++|+|+++|+||++|+||||++.+    ..+..|+|||+|+|.|+|++||++|+++++|.|+++|+|++.++
T Consensus       353 ~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~----~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~  428 (452)
T PLN03141        353 WCVLAYFRSVHLDEENYDNPYQFNPWRWQEKD----MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEED  428 (452)
T ss_pred             CEEEEehHhccCCchhcCCccccCcccccCCC----CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCC
Confidence            99999999999999999999999999999752    23568999999999999999999999999999999999998655


Q ss_pred             CCCCCCCCCCCCcceecccCCeeeEeeec
Q 035527          493 MEIDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      .   ..     ...++.|+.++.|++++|
T Consensus       429 ~---~~-----~~~~~~~~~~~~~~~~~~  449 (452)
T PLN03141        429 T---IV-----NFPTVRMKRKLPIWVTRI  449 (452)
T ss_pred             C---ee-----ecccccCCCCceEEEEeC
Confidence            2   11     124778889999999987


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=4.9e-67  Score=530.51  Aligned_cols=437  Identities=19%  Similarity=0.244  Sum_probs=341.2

Q ss_pred             ccCCCCCCCCCCCcccccccCCC----CCChhHHHHHHHHhhCC--eEEEeecCeeEEEecCHHHHHHHHHhCCcccccC
Q 035527           26 NTRAKLPPGPPGLPLIGNLHQLD----ATNLAFCFWKLSKQYGP--IFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSR   99 (522)
Q Consensus        26 ~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~   99 (522)
                      ..+.+.||||+++|++|+++.+.    ..+++.++.+++++||+  +|++++++.+.++++||+++++|+.++ ..|.++
T Consensus        38 ~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~  116 (490)
T PLN02302         38 EGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPG  116 (490)
T ss_pred             cCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccC
Confidence            34567899999999999988752    34678889999999997  799999999999999999999999865 445443


Q ss_pred             CCCccccccccCccceeecCCChhHHHHHHHHHhhcC-ChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhh
Q 035527          100 PALSGTQKLSYNFLGLTLTPHYNSWREMKKKFVTHIL-SANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSA  178 (522)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  178 (522)
                      .......  .. +.+.....+|+.|+++|+.+ .+.| +.+.++.+.+.+.+.+.                 .+++.+..
T Consensus       117 ~~~~~~~--~~-g~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~-----------------~~~~~~~~  175 (490)
T PLN02302        117 WPESTVE--LI-GRKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVK-----------------SCLEKWSK  175 (490)
T ss_pred             CchhHHH--Hh-ccccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHH-----------------HHHHHhcC
Confidence            2211111  11 22334445799999999998 6666 57889999999999888                 88887743


Q ss_pred             cccccccccccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccccccccccccchhhhhh
Q 035527          179 APAAAADDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSL  258 (522)
Q Consensus       179 ~~~~~~~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~  258 (522)
                                  +..+|+.+.+..++++++++++||.+....    ...+.+.+......+...  ...+|..       
T Consensus       176 ------------~~~v~~~~~~~~~~~~vi~~~~~G~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~p~~-------  230 (490)
T PLN02302        176 ------------MGEIEFLTELRKLTFKIIMYIFLSSESELV----MEALEREYTTLNYGVRAM--AINLPGF-------  230 (490)
T ss_pred             ------------CCCEehHHHHHHHHHHHHHHHHcCCCChHH----HHHHHHHHHHHHHHhhhC--CcCCCch-------
Confidence                        235999999999999999999999876432    222322222221111110  1112221       


Q ss_pred             hhhHHHHHhhhhhHHHHHHHHHHhhcCCCCCC-ccccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchHHHHH
Q 035527          259 TGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPK-VAEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIKVTLE  336 (522)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~~~l~  336 (522)
                        ..++..+..+.+.+++.+.++++++....+ .....|+++.+++...+.+..++++++.+++.. ++||+|||+++++
T Consensus       231 --~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~  308 (490)
T PLN02302        231 --AYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTM  308 (490)
T ss_pred             --hhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHH
Confidence              122334556677788888888776543211 122579999999875544456899999999999 9999999999999


Q ss_pred             HHHHHHhhCcHHHHHHHHHHHHHhccC----CCCCCCCCCCchhHHHHHHHHhccCCCCCCCcccccccceeecEEeCCC
Q 035527          337 WAMTNLMKNPEAMKKVQKEVRYVVKDK----GFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCVIDGYHIPAK  412 (522)
Q Consensus       337 ~~l~~L~~~p~~~~~lr~Ei~~~~~~~----~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~~g~~ip~G  412 (522)
                      |++++|++||++|+|+++|++++.+..    ..++++++++||||+|||+|+||++|+++..+|.+.+|++++|+.||||
T Consensus       309 ~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~G  388 (490)
T PLN02302        309 WATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKG  388 (490)
T ss_pred             HHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCC
Confidence            999999999999999999999987642    1378899999999999999999999999988899999999999999999


Q ss_pred             cEEEEechhhccCCCCCCCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCC
Q 035527          413 TTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHG  492 (522)
Q Consensus       413 ~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~  492 (522)
                      +.|.++.+++|+||++|+||++|+||||++..    ..+..++|||+|+|.|+|++||..|++++++.|+++|+|++.++
T Consensus       389 t~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  464 (490)
T PLN02302        389 WKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNP  464 (490)
T ss_pred             CEEEeeHHHhcCCcccCCCccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCC
Confidence            99999999999999999999999999999642    24568999999999999999999999999999999999998754


Q ss_pred             CCCCCCCCCCCCcceecccCCeeeEeeec
Q 035527          493 MEIDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                      ..  +  ..  ...+..|.+++.|++++|
T Consensus       465 ~~--~--~~--~~~~~~p~~~~~~~~~~~  487 (490)
T PLN02302        465 GC--K--VM--YLPHPRPKDNCLARITKV  487 (490)
T ss_pred             CC--c--ce--eCCCCCCCCCceEEEEec
Confidence            21  1  12  223368888999999877


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.2e-66  Score=523.61  Aligned_cols=451  Identities=21%  Similarity=0.317  Sum_probs=347.0

Q ss_pred             CCCCCCCCCcccccccCCC----CCChhHHHHHHHHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCccc
Q 035527           30 KLPPGPPGLPLIGNLHQLD----ATNLAFCFWKLSKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGT  105 (522)
Q Consensus        30 ~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~  105 (522)
                      +.-.|-.|||++|..+++.    ...++..+.+|+++||+||++++|+.+.++++||+++++|+.+.+..|.+++.....
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~   91 (489)
T PLN02936         12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS   91 (489)
T ss_pred             ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence            4557888999999988864    567888999999999999999999999999999999999998766777665432211


Q ss_pred             cccccCccceeecCCChhHHHHHHHHHhhcCChHHHHHhhh-hhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccc
Q 035527          106 QKLSYNFLGLTLTPHYNSWREMKKKFVTHILSANRTEQFRQ-VQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAA  184 (522)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  184 (522)
                      ...  .+. .++..+|+.|+.+||.+ .+.|+...+..+.+ ++.++++                 .+++.+.+.     
T Consensus        92 ~~~--~~~-~i~~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~-----------------~l~~~l~~~-----  145 (489)
T PLN02936         92 EFL--FGS-GFAIAEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAE-----------------RLVEKLEPV-----  145 (489)
T ss_pred             HHH--hcC-ccccCCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHH-----------------HHHHHHHHH-----
Confidence            111  122 34456799999999998 88999888887644 7778888                 899998765     


Q ss_pred             cccccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccccccccccccc-hhhhhhhhhHH
Q 035527          185 DDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCLPFVG-CWLDSLTGWNR  263 (522)
Q Consensus       185 ~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~-~~~~~~~~~~~  263 (522)
                         ..++.++|+.+++..+++++++.++||.+++....+  .++.+.+......... .....+|++. .++..+.+..+
T Consensus       146 ---~~~g~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~  219 (489)
T PLN02936        146 ---ALSGEAVNMEAKFSQLTLDVIGLSVFNYNFDSLTTD--SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQI  219 (489)
T ss_pred             ---hcCCCceeHHHHHHHHHHHHHHHHHcCCCccccccC--cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhH
Confidence               345678999999999999999999999998754222  1233333332221111 1112233221 11111112334


Q ss_pred             HHHhhhhhHHHHHHHHHHhhcCCCCC-------C---ccccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchH
Q 035527          264 RLRNNFSDCDKVYQQLIEDHLDPKRP-------K---VAEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIK  332 (522)
Q Consensus       264 ~~~~~~~~~~~~~~~~i~~~~~~~~~-------~---~~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~  332 (522)
                      +..++.+.+.+++.+.++++++..+.       .   .....++++.|++..    +.++.+++.+++.. ++||+|||+
T Consensus       220 ~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~i~~~~~~~~~aG~dTta  295 (489)
T PLN02936        220 KAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASR----EEVSSVQLRDDLLSMLVAGHETTG  295 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCchHHHHHHHhcc----ccCCHHHHHHHHHHHHHHhHHHHH
Confidence            55667777777877777765431110       0   011467888888653    25889999999999 999999999


Q ss_pred             HHHHHHHHHHhhCcHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhccCCCCC-CCcccccccceeecEEeCC
Q 035527          333 VTLEWAMTNLMKNPEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRFQPAAQ-FLPRETTERCVIDGYHIPA  411 (522)
Q Consensus       333 ~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~-~~~R~~~~d~~~~g~~ip~  411 (522)
                      ++++|++|+|++||++|+++|+|++++++. ..++++++++||||+|||+||||++|+++ ..+|.+.+|+.++|++|||
T Consensus       296 ~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~  374 (489)
T PLN02936        296 SVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNA  374 (489)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECC
Confidence            999999999999999999999999999875 45788999999999999999999999998 5556667778889999999


Q ss_pred             CcEEEEechhhccCCCCCCCCCCCCCCcccCCCCC--CCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeec
Q 035527          412 KTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNID--MGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTM  489 (522)
Q Consensus       412 G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~--~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~  489 (522)
                      |+.|+++.+.+|+||++|+||++|+||||++++..  ....+..|+|||.|+|.|+|++||++|+++++++|+++|++++
T Consensus       375 Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~  454 (489)
T PLN02936        375 GQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLEL  454 (489)
T ss_pred             CCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEe
Confidence            99999999999999999999999999999964321  1223468999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCcceecccCCeeeEeeecC
Q 035527          490 PHGMEIDDLDYDANPGFTQHKKNPLRLAATKFI  522 (522)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  522 (522)
                      +++.   ++  ....+++..|+++++|++++|.
T Consensus       455 ~~~~---~~--~~~~~~~~~~~~~~~v~~~~R~  482 (489)
T PLN02936        455 VPDQ---DI--VMTTGATIHTTNGLYMTVSRRR  482 (489)
T ss_pred             cCCC---cc--ceecceEEeeCCCeEEEEEeee
Confidence            7653   22  2234577788899999999984


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=3.2e-64  Score=505.04  Aligned_cols=443  Identities=18%  Similarity=0.230  Sum_probs=333.9

Q ss_pred             CcccccccCCCCCChhHHHHHHHHhhC-CeEEEeecCeeEEEecCHHHHHHHHHhCCcccccCCCCccccccccCcccee
Q 035527           38 LPLIGNLHQLDATNLAFCFWKLSKQYG-PIFSLRLGFRPTIVISSAKLAKEAFKTHDLQFSSRPALSGTQKLSYNFLGLT  116 (522)
Q Consensus        38 ~p~~G~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (522)
                      .++.|+.... ..+....+..+.++++ .+++++..+.  ++++||+.+++|+..+...|.+.......... ..+.+ +
T Consensus        49 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~-~~g~g-i  123 (502)
T PLN02426         49 AYLTASWAKD-FDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGD-LLGRG-I  123 (502)
T ss_pred             CCccHHHHHh-cccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHH-hcCCc-e
Confidence            5578887664 2345666666778877 6788776554  89999999999998776666654332111111 11334 4


Q ss_pred             ecCCChhHHHHHHHHHhhcCChHHHHHhh--hhhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccccccccCCCcc
Q 035527          117 LTPHYNSWREMKKKFVTHILSANRTEQFR--QVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAADDYVSSEAPI  194 (522)
Q Consensus       117 ~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~v  194 (522)
                      ++.+|+.|+.+||.+ .+.|+...++.+.  +.+.+...                 .+++.+.+...      .+++.++
T Consensus       124 ~~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~-----------------~l~~~l~~~~~------~~~~~~v  179 (502)
T PLN02426        124 FNVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIES-----------------RLLPLLSSAAD------DGEGAVL  179 (502)
T ss_pred             eecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHhh------cCCCceE
Confidence            556799999999998 8999999888763  56666666                 77777765410      1124679


Q ss_pred             chHHHHHHHHHHHHHHHhcCccccccchh-HHHhHHHHHHHHHHhhccccccccccccchhhhhh-hhhHHHHHhhhhhH
Q 035527          195 NLSEIAMTLIRYIIFRVGFGKRFEDEGTA-AVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSL-TGWNRRLRNNFSDC  272 (522)
Q Consensus       195 d~~~~~~~~~~~ii~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~-~~~~~~~~~~~~~~  272 (522)
                      |+.+++..+++|+++.++||.+++..+.+ ...++.+.+......... .....+|++..+..++ .+..++..+..+.+
T Consensus       180 d~~~~~~~~t~dvi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  258 (502)
T PLN02426        180 DLQDVFRRFSFDNICKFSFGLDPGCLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLV  258 (502)
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCcccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHH
Confidence            99999999999999999999988654321 023344444433221110 0111223222111111 12345667788889


Q ss_pred             HHHHHHHHHhhcCCCCCCccccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchHHHHHHHHHHHhhCcHHHHH
Q 035527          273 DKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIKVTLEWAMTNLMKNPEAMKK  351 (522)
Q Consensus       273 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~~~l~~~l~~L~~~p~~~~~  351 (522)
                      .+++.+.|+++++...   ....|+++.+++..      .+++++.+++.+ ++||+|||+++++|++|+|++||++|+|
T Consensus       259 ~~~~~~~I~~r~~~~~---~~~~dll~~ll~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~k  329 (502)
T PLN02426        259 DELAAEVIRQRRKLGF---SASKDLLSRFMASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASA  329 (502)
T ss_pred             HHHHHHHHHHHHhccc---CCcchHHHHHHhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHH
Confidence            9999999998875421   12578999999753      266889999999 9999999999999999999999999999


Q ss_pred             HHHHHHHHhccC-CCCCCCCCCCchhHHHHHHHHhccCCCCCCCccccccccee-ecEEeCCCcEEEEechhhccCCCCC
Q 035527          352 VQKEVRYVVKDK-GFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCVI-DGYHIPAKTTVFVNVLAIGRDGQVW  429 (522)
Q Consensus       352 lr~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~  429 (522)
                      +|+|++++.+.+ ..++++++++||||+|||+|+||++|+++...|.+.+|.++ +|+.||||+.|.++.+++||||++|
T Consensus       330 l~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~  409 (502)
T PLN02426        330 IREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIW  409 (502)
T ss_pred             HHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCcccc
Confidence            999999988753 36899999999999999999999999999777999999887 9999999999999999999999999


Q ss_pred             -CCCCCCCCCcccCCCCCCCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCCCCCCCCCCCCCccee
Q 035527          430 -DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGMEIDDLDYDANPGFTQ  508 (522)
Q Consensus       430 -~dp~~F~P~R~l~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  508 (522)
                       +||++|+||||++++......++.|+|||+|+|.|+|++||++|++++++.|+++|++++.++..  + ......++++
T Consensus       410 G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~-~~~~~~~~~~  486 (502)
T PLN02426        410 GPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN--R-APRFAPGLTA  486 (502)
T ss_pred             CcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC--C-CCcccceeEE
Confidence             99999999999974321123456899999999999999999999999999999999999864421  1 1223446889


Q ss_pred             cccCCeeeEeeecC
Q 035527          509 HKKNPLRLAATKFI  522 (522)
Q Consensus       509 ~~~~~~~~~~~~r~  522 (522)
                      +|++++.|++++|.
T Consensus       487 ~~~~gl~v~~~~r~  500 (502)
T PLN02426        487 TVRGGLPVRVRERV  500 (502)
T ss_pred             ecCCCEEEEEEEcc
Confidence            99999999999884


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3.3e-57  Score=447.11  Aligned_cols=410  Identities=18%  Similarity=0.237  Sum_probs=294.1

Q ss_pred             CCCCCCCCCCCcccccccCCC----CCChhHHHHHHHHhhCC-eEEEeecCeeE-------EEecCHHHHHHHHHh----
Q 035527           28 RAKLPPGPPGLPLIGNLHQLD----ATNLAFCFWKLSKQYGP-IFSLRLGFRPT-------IVISSAKLAKEAFKT----   91 (522)
Q Consensus        28 ~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvi~dp~~~~~i~~~----   91 (522)
                      +.+.|||+.+||++|++.+|.    ..++..++.+.++|||+ ||+++++|.|.       |+++||++++.+|..    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            456799999999999998652    45667899999999998 99999999666       999999999999974    


Q ss_pred             CCcccccCCCCccccccccCccc---eeecCCChhHHHHHHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchh
Q 035527           92 HDLQFSSRPALSGTQKLSYNFLG---LTLTPHYNSWREMKKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQ  168 (522)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (522)
                      ++..+..... .... + . +.+   .++..+|+.|+++|+.+ .+.|+. .++.+.+.+.+.+.               
T Consensus        95 ~~~~~~~~~~-~~~~-l-~-G~~~~~s~~~~~g~~H~r~Rrll-~~~f~~-~~~~~~~~m~~~~~---------------  153 (480)
T PLN02648         95 KRDVFTGTYM-PSTA-F-T-GGYRVLSYLDPSEPKHAKLKSFL-FELLKS-RHRRFIPEFRAAFA---------------  153 (480)
T ss_pred             ccccceeeec-cCcc-c-c-CCceeeeecCCCCchHHHHHHHH-HHHHHH-hhhhhhhHHHHHHH---------------
Confidence            3333332211 1222 2 1 222   45566799999999998 788884 66889999999999               


Q ss_pred             HHHHHHHHhhcccccccccccCCCccchHHHHHHHHHHHHHHHhcCccccccchhHHHhHHHHHHHHHHhhccccccccc
Q 035527          169 KKIYISKLSAAPAAAADDYVSSEAPINLSEIAMTLIRYIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCL  248 (522)
Q Consensus       169 ~~~l~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (522)
                        .+++.|...        .+.+.++|+.+.++.++++++++++||.+.+..  +....+...................+
T Consensus       154 --~~~~~w~~~--------~~~~~~vdv~~~~~~lt~~vi~~~lfG~~~~~~--~l~~~~~~~~~~~~~~~~~p~~~~~l  221 (480)
T PLN02648        154 --ELFDTWEAE--------LAKKGKAEFNDPLDQMAFNFLCKALTGKDPSET--ALGSDGPALIQKWLALQLAPLASTGL  221 (480)
T ss_pred             --HHHHHHHHH--------HhhCCCccccchHHHHHHHHHHHHHcCCCcchh--hhccchhHHHHHHHHHHhhHHHHcCc
Confidence              999999653        234557999999999999999999999875531  10111111111111100000000000


Q ss_pred             c-ccchhhh-hhhhhHHHHHhhhhhHHHHHHHHHHhhcCCCCCCccccccHHHHHHHhccccCCccChHHHHHHHHH--H
Q 035527          249 P-FVGCWLD-SLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLTEMKIADDHQTFDSIKSTIME--N  324 (522)
Q Consensus       249 p-~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~--~  324 (522)
                      | ++...+. .+........+..+.+.+++++                  .+..+++...+  .+++++++.++++.  .
T Consensus       222 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~ll~~~~~--~~l~~~ei~~~~l~~~~  281 (480)
T PLN02648        222 PHVLEELLLHTFPLPFFLVKSDYDKLYDFFRA------------------SATEALDLAEK--FGISREEALHNLLFVLG  281 (480)
T ss_pred             hHHHHHHhhcccCCchhhhhccHHHHHHHHHH------------------HHHHHHHHHHh--cCCCHHHHHHHHHHHHH
Confidence            1 0000000 0000000000111111111111                  12233333322  25899999998876  4


Q ss_pred             HhhccchHHHHHHHHHHHhhCcH-HHHHHHHHHHHHhcc-CCCCCCCCCCCchhHHHHHHHHhccCCCCCCCcccccccc
Q 035527          325 IAAMDTIKVTLEWAMTNLMKNPE-AMKKVQKEVRYVVKD-KGFVDEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERC  402 (522)
Q Consensus       325 ~ag~~tt~~~l~~~l~~L~~~p~-~~~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~  402 (522)
                      +++++|++++++|++|+|++||+ +|+++++|++++.+. ++.++.+++++||||++||+|+||++|+++...|.+.+|+
T Consensus       282 ~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~  361 (480)
T PLN02648        282 FNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDF  361 (480)
T ss_pred             HHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCE
Confidence            67788888999999999999995 999999999999863 4568999999999999999999999999998889999999


Q ss_pred             eee----cEEeCCCcEEEEechhhccCCCCCCCCCCCCCCcccCCCCCCCCCCcccccc---------CCCCCCCCcHHh
Q 035527          403 VID----GYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPF---------GAGRRICTGLPI  469 (522)
Q Consensus       403 ~~~----g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~pF---------g~G~r~C~G~~l  469 (522)
                      +++    ||.||||+.|+++.+.+|+||++|+||++|||+||++++.+   ....+++|         |+|+|.|+|++|
T Consensus       362 ~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~  438 (480)
T PLN02648        362 VIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDF  438 (480)
T ss_pred             EEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHH
Confidence            996    79999999999999999999999999999999999864321   11233333         678899999999


Q ss_pred             HHHHHHHHHHHHHHhce-eecCCCC
Q 035527          470 AMPIVELALANLLYKLD-WTMPHGM  493 (522)
Q Consensus       470 A~~~~~~~la~ll~~f~-~~~~~~~  493 (522)
                      |+.|++++++.|+++|+ |++.++.
T Consensus       439 A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        439 VVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             HHHHHHHHHHHHHHHhCEEeecCCc
Confidence            99999999999999998 9987764


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2e-52  Score=408.55  Aligned_cols=382  Identities=25%  Similarity=0.309  Sum_probs=304.7

Q ss_pred             hhHHHHHHHHhhCCeEEEeecCee--EEEecCHHHHHHHHHhCCcccccCCCCcccc--ccccCccceeecCCChhHHHH
Q 035527           52 LAFCFWKLSKQYGPIFSLRLGFRP--TIVISSAKLAKEAFKTHDLQFSSRPALSGTQ--KLSYNFLGLTLTPHYNSWREM  127 (522)
Q Consensus        52 ~~~~~~~~~~kyG~v~~~~~~~~~--~vvi~dp~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  127 (522)
                      +......+.+.||.+++++..++.  ++++++++.++++++++. .+++........  .....+.+.++..+|+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            445567788899999998887765  899999999999998764 222222111111  111112333667789999999


Q ss_pred             HHHHHhhcCChHHHHHhhhhhHHHHHhhhcccccccCCchhHHHHHHHHhhcccccccccccCCCccchHHHHHHHHHHH
Q 035527          128 KKKFVTHILSANRTEQFRQVQTEEIFLGAQYGRRKSDGLNQKKIYISKLSAAPAAAADDYVSSEAPINLSEIAMTLIRYI  207 (522)
Q Consensus       128 Rk~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~i  207 (522)
                      ||.+ .+.|+++.++.+.+.+.+.+.                 ++++.+ ..          + ..+++.+.+..++.++
T Consensus       103 Rkl~-~~~F~~~~~~~~~~~i~~~~~-----------------~~~~~~-~~----------~-~~~~v~~~a~~l~~~v  152 (411)
T COG2124         103 RKLL-APAFTPRALRGYRPLIREIAD-----------------RLLDDL-WQ----------G-GADLVLDFAAELTLRV  152 (411)
T ss_pred             HHHh-ccccCHHHHHHHHHHHHHHHH-----------------HHHHhc-cc----------C-CchhHHHHhhhhhHHH
Confidence            9998 899999999999999999998                 899888 43          2 6888999999999999


Q ss_pred             HHHHhcCccccccchhHHHhHHHHHHHHHHhhccccccccccccchhhhhhhhhHHHHHhhhhhHHHHHHHHHHhhcCCC
Q 035527          208 IFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPK  287 (522)
Q Consensus       208 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  287 (522)
                      ++ .+||.+..+     ...+...........        .|....     ....++..++...+.+++..+|++++...
T Consensus       153 i~-~l~Gv~~~~-----~~~~~~~~~~~~~~~--------~~~~~~-----~~~~~~~~~a~~~~~~~~~~li~~rR~~~  213 (411)
T COG2124         153 IA-ELLGVPLED-----RPQLLRWSDALLLRL--------DPDLGP-----EEPWRRARAARRELDAYLRALIAERRAAP  213 (411)
T ss_pred             HH-HHhCCCHHH-----HHHHHHHHHHHHhcc--------CcccCC-----cccHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            99 999998764     222322222222210        021110     11246677888999999999999998332


Q ss_pred             CCCccccccHHHHHHHhccccCCccChHHHHHHHHH-HHhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhccCCCC
Q 035527          288 RPKVAEQEDLIDVLLTEMKIADDHQTFDSIKSTIME-NIAAMDTIKVTLEWAMTNLMKNPEAMKKVQKEVRYVVKDKGFV  366 (522)
Q Consensus       288 ~~~~~~~~~~l~~ll~~~~~~~~~~~~~~i~~~~~~-~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  366 (522)
                            .+|+++.|+....+++..++++|+.+++++ ++||+|||+++|+|++|.|++||+.++++++|.+.        
T Consensus       214 ------~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~--------  279 (411)
T COG2124         214 ------RDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR--------  279 (411)
T ss_pred             ------cccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch--------
Confidence                  789999999887766446999999999999 99999999999999999999999999999999764        


Q ss_pred             CCCCCCCchhHHHHHHHHhccCCCCCCCcccccccceeecEEeCCCcEEEEechhhccCCCCCCCCCCCCCCcccCCCCC
Q 035527          367 DEDDLPRLEYLKAVVKETLRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNID  446 (522)
Q Consensus       367 ~~~~l~~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~  446 (522)
                              ||++++++|+||++||++...|.+.+|++++|+.||||+.|+++.+++||||++|+||++|||+||.     
T Consensus       280 --------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~-----  346 (411)
T COG2124         280 --------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN-----  346 (411)
T ss_pred             --------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC-----
Confidence                    8999999999999999999999999999999999999999999999999999999999999999997     


Q ss_pred             CCCCCccccccCCCCCCCCcHHhHHHHHHHHHHHHHHhceeecCCCCCCCCCCCCCCCcceecccCCeeeEeeec
Q 035527          447 MGGQNFEFIPFGAGRRICTGLPIAMPIVELALANLLYKLDWTMPHGMEIDDLDYDANPGFTQHKKNPLRLAATKF  521 (522)
Q Consensus       447 ~~~~~~~~~pFg~G~r~C~G~~lA~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  521 (522)
                           ..++|||+|+|.|+|.+||++|++++++.++++|++....+ . ..    .....+..+..+..+.++.+
T Consensus       347 -----~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~~----~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         347 -----NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-P-PP----LVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             -----CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-C-CC----ccccccccCCCcceeeeecC
Confidence                 47899999999999999999999999999999999987665 2 11    12233445555566655543


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=49.34  E-value=41  Score=21.45  Aligned_cols=42  Identities=24%  Similarity=0.295  Sum_probs=32.8

Q ss_pred             HHHHHHHH-HHhhccchHHHHHHHHHHHhhCcHHHHHHHHHHH
Q 035527          316 SIKSTIME-NIAAMDTIKVTLEWAMTNLMKNPEAMKKVQKEVR  357 (522)
Q Consensus       316 ~i~~~~~~-~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~  357 (522)
                      ++..++.. +-.|.|-.+-.++-.+.+..-||+.++.+-.|++
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            44555555 6678888888888888888889999999888863


No 34 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=48.91  E-value=17  Score=24.14  Aligned_cols=18  Identities=28%  Similarity=0.612  Sum_probs=15.6

Q ss_pred             HHHHHhhCcHHHHHHHHH
Q 035527          338 AMTNLMKNPEAMKKVQKE  355 (522)
Q Consensus       338 ~l~~L~~~p~~~~~lr~E  355 (522)
                      .+.+|.+||++.+++.+.
T Consensus         5 iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHChHHHHHHHcC
Confidence            578999999999999764


No 35 
>PHA03049 IMV membrane protein; Provisional
Probab=48.05  E-value=45  Score=22.67  Aligned_cols=22  Identities=5%  Similarity=0.310  Sum_probs=12.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcc
Q 035527            4 LVLVILFCLPIFLLFLLQKHRK   25 (522)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~   25 (522)
                      ++++++++++++++|-++.+..
T Consensus         6 ~l~iICVaIi~lIvYgiYnkk~   27 (68)
T PHA03049          6 ILVIICVVIIGLIVYGIYNKKT   27 (68)
T ss_pred             HHHHHHHHHHHHHHHHHHhccc
Confidence            3344555555566666666554


No 36 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=46.74  E-value=90  Score=23.72  Aligned_cols=62  Identities=26%  Similarity=0.306  Sum_probs=44.0

Q ss_pred             cCCCCCCCCCCCcccccccCCCCCChhHHHHHHHHhhCCeEEEeecC------eeEEEecCHHHHHHHHHh
Q 035527           27 TRAKLPPGPPGLPLIGNLHQLDATNLAFCFWKLSKQYGPIFSLRLGF------RPTIVISSAKLAKEAFKT   91 (522)
Q Consensus        27 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~------~~~vvi~dp~~~~~i~~~   91 (522)
                      .+.+.||....+-++-|+.-   +=-..-..++.-+||+|-++++|.      .-+||-.|-..++.....
T Consensus         9 ~~~rlppevnriLyirNLp~---~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen    9 QNIRLPPEVNRILYIRNLPF---KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCCCCChhhheeEEEecCCc---cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            45566777777777877753   223344667888999999999885      456787887777777653


No 37 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=46.32  E-value=42  Score=24.29  Aligned_cols=23  Identities=35%  Similarity=0.506  Sum_probs=10.3

Q ss_pred             ChhHHHHHHHHHHHHHHHHHhhh
Q 035527            1 MALLVLVILFCLPIFLLFLLQKH   23 (522)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~   23 (522)
                      |.++++.+.+++++++.+...+.
T Consensus        35 m~~lvI~~iFil~VilwfvCC~k   57 (94)
T PF05393_consen   35 MWFLVICGIFILLVILWFVCCKK   57 (94)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHH
Confidence            34444444444444444444443


No 38 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=46.08  E-value=3.1e+02  Score=27.92  Aligned_cols=15  Identities=20%  Similarity=0.286  Sum_probs=10.4

Q ss_pred             hHHHHHHHHhccCCC
Q 035527          376 YLKAVVKETLRFQPA  390 (522)
Q Consensus       376 ~l~a~i~EtlRl~p~  390 (522)
                      .-++.-+|.++.-|.
T Consensus       349 ~Q~~L~~Ei~~~~p~  363 (519)
T KOG0159|consen  349 VQQRLREEILAVLPS  363 (519)
T ss_pred             HHHHHHHHHHhhCCC
Confidence            345667788887776


No 39 
>PRK06789 flagellar motor switch protein; Validated
Probab=37.98  E-value=39  Score=23.93  Aligned_cols=39  Identities=13%  Similarity=0.168  Sum_probs=30.4

Q ss_pred             HHHHHhccCCCCC-CCccccccc--ceeecEEeCCCcEEEEe
Q 035527          380 VVKETLRFQPAAQ-FLPRETTER--CVIDGYHIPAKTTVFVN  418 (522)
Q Consensus       380 ~i~EtlRl~p~~~-~~~R~~~~d--~~~~g~~ip~G~~v~~~  418 (522)
                      -++|.+.|.+... .+-|.+.+.  +.++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            3788999997665 666777665  45699999999998875


No 40 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=36.42  E-value=47  Score=26.23  Aligned_cols=9  Identities=11%  Similarity=0.523  Sum_probs=3.5

Q ss_pred             HHHHHhhhc
Q 035527           16 LLFLLQKHR   24 (522)
Q Consensus        16 ~~~~~~~~~   24 (522)
                      +.|++.+++
T Consensus        84 i~y~irR~~   92 (122)
T PF01102_consen   84 ISYCIRRLR   92 (122)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHHh
Confidence            334433333


No 41 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=35.95  E-value=87  Score=21.48  Aligned_cols=20  Identities=10%  Similarity=0.354  Sum_probs=10.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhc
Q 035527            5 VLVILFCLPIFLLFLLQKHR   24 (522)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~   24 (522)
                      +++++++++++++|-++.+.
T Consensus         7 Li~ICVaii~lIlY~iYnr~   26 (68)
T PF05961_consen    7 LIIICVAIIGLILYGIYNRK   26 (68)
T ss_pred             HHHHHHHHHHHHHHHHHhcc
Confidence            33344445555666665554


No 42 
>KOG4189 consensus Uncharacterized conserved protein [Function unknown]
Probab=34.17  E-value=1.7e+02  Score=25.12  Aligned_cols=49  Identities=14%  Similarity=0.272  Sum_probs=39.2

Q ss_pred             ccChHHHHHHHHH-HHhhccchH--HHHHHHHHHHhhCcHHHHHHHHHHHHH
Q 035527          311 HQTFDSIKSTIME-NIAAMDTIK--VTLEWAMTNLMKNPEAMKKVQKEVRYV  359 (522)
Q Consensus       311 ~~~~~~i~~~~~~-~~ag~~tt~--~~l~~~l~~L~~~p~~~~~lr~Ei~~~  359 (522)
                      ..+..+++..+.+ .+|-+.+-+  .+...++|-|-..|+.+.+|+++++..
T Consensus       127 D~s~~diakesYd~~lakhHsW~IRtAV~~amYtLPTR~~lL~~Lk~d~~~~  178 (209)
T KOG4189|consen  127 DESLKDIAKESYDKTLAKHHSWAIRTAVAAAMYTLPTRPELLCRLKEDMDAA  178 (209)
T ss_pred             cchhhHHHHHHHHHhhhccccHHHHHHHHHHHHhCCCcHHHHHHHHhHHHHH
Confidence            4455677778888 778877765  466788999999999999999998665


No 43 
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=33.61  E-value=88  Score=17.26  Aligned_cols=22  Identities=14%  Similarity=0.248  Sum_probs=12.5

Q ss_pred             ChhHHHHHHHHHHHHHHHHHhh
Q 035527            1 MALLVLVILFCLPIFLLFLLQK   22 (522)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~   22 (522)
                      |++.++.-.+++++++.|+++.
T Consensus         1 Ms~~vi~g~llv~lLl~YLvYA   22 (29)
T PRK14750          1 MNFSIVCGALLVLLLLGYLVYA   22 (29)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH
Confidence            5666666555555555555554


No 44 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=32.92  E-value=35  Score=29.64  Aligned_cols=44  Identities=23%  Similarity=0.216  Sum_probs=31.6

Q ss_pred             CchhHHHHHHHHhccCCCCCCCcccccccceeecEEeCCCcEEEE
Q 035527          373 RLEYLKAVVKETLRFQPAAQFLPRETTERCVIDGYHIPAKTTVFV  417 (522)
Q Consensus       373 ~lp~l~a~i~EtlRl~p~~~~~~R~~~~d~~~~g~~ip~G~~v~~  417 (522)
                      .-..+.|||.|+.-+.... .+.=...+|+.++|..||||+.|+-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGS-RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCC-EEEEEEcCceEECCEEeCCCCEEEE
Confidence            3445679999998776332 3322456889999999999998765


No 45 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=31.95  E-value=1.7e+02  Score=29.25  Aligned_cols=37  Identities=16%  Similarity=0.283  Sum_probs=21.0

Q ss_pred             HHhhCCeEEEeecCeeEEEecCHHHHHHHHHhCCccc
Q 035527           60 SKQYGPIFSLRLGFRPTIVISSAKLAKEAFKTHDLQF   96 (522)
Q Consensus        60 ~~kyG~v~~~~~~~~~~vvi~dp~~~~~i~~~~~~~~   96 (522)
                      +-+||.|++-.+.++.+-|=.-|+.-++=|.+....|
T Consensus       220 ~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy  256 (534)
T KOG3653|consen  220 RGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIY  256 (534)
T ss_pred             cCccceeehhhccCceeEEEecCHHHHHHHHhHHHHH
Confidence            3478889988877766655444444444444433333


No 46 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=31.37  E-value=1.1e+02  Score=18.59  Aligned_cols=29  Identities=31%  Similarity=0.429  Sum_probs=19.9

Q ss_pred             cHHHHHHHHHHHHHhccCCCCCCCCCCCchhHHHHHHHHhcc
Q 035527          346 PEAMKKVQKEVRYVVKDKGFVDEDDLPRLEYLKAVVKETLRF  387 (522)
Q Consensus       346 p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl  387 (522)
                      .|+++.+|.|+..+-.             ..++|+..|-.|.
T Consensus        10 qEIL~EvrkEl~K~K~-------------EIIeA~~~eL~r~   38 (40)
T PF08776_consen   10 QEILEEVRKELQKVKE-------------EIIEAIRQELSRR   38 (40)
T ss_dssp             HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH-------------HHHHHHHHHHhcc
Confidence            4778888888877633             2567777776653


No 47 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=30.78  E-value=1e+02  Score=23.78  Aligned_cols=10  Identities=40%  Similarity=0.434  Sum_probs=6.6

Q ss_pred             CcccccccCC
Q 035527           38 LPLIGNLHQL   47 (522)
Q Consensus        38 ~p~~G~~~~~   47 (522)
                      -|+-||+...
T Consensus        46 ~p~YgNL~~~   55 (107)
T PF15330_consen   46 DPCYGNLELQ   55 (107)
T ss_pred             Cccccccccc
Confidence            6777776554


No 48 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=30.73  E-value=1e+02  Score=22.51  Aligned_cols=18  Identities=22%  Similarity=0.551  Sum_probs=15.5

Q ss_pred             CcHHHHHHHHHHHHHhcc
Q 035527          345 NPEAMKKVQKEVRYVVKD  362 (522)
Q Consensus       345 ~p~~~~~lr~Ei~~~~~~  362 (522)
                      .|+.++.+|+||-+++..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            489999999999998764


No 49 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=30.18  E-value=45  Score=19.00  Aligned_cols=16  Identities=25%  Similarity=0.773  Sum_probs=13.1

Q ss_pred             CCccccccCCCCCCCC
Q 035527          450 QNFEFIPFGAGRRICT  465 (522)
Q Consensus       450 ~~~~~~pFg~G~r~C~  465 (522)
                      ....|+|+++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            4468999999999984


No 50 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=28.39  E-value=57  Score=26.10  Aligned_cols=22  Identities=14%  Similarity=0.308  Sum_probs=16.5

Q ss_pred             CCCcHHhHHHHHHHHHHHHHHh
Q 035527          463 ICTGLPIAMPIVELALANLLYK  484 (522)
Q Consensus       463 ~C~G~~lA~~~~~~~la~ll~~  484 (522)
                      .|.|+.||+.++-.++..|+..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999864


No 51 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=28.31  E-value=65  Score=26.66  Aligned_cols=38  Identities=21%  Similarity=0.323  Sum_probs=29.9

Q ss_pred             CCChhHHHHHHHHhhC-CeEEEeecCe-e---EEEecCHHHHH
Q 035527           49 ATNLAFCFWKLSKQYG-PIFSLRLGFR-P---TIVISSAKLAK   86 (522)
Q Consensus        49 ~~~~~~~~~~~~~kyG-~v~~~~~~~~-~---~vvi~dp~~~~   86 (522)
                      +......++++++++| +|+.+.++|. |   -+|++||-.+-
T Consensus       153 GGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAG  195 (218)
T COG1707         153 GGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAG  195 (218)
T ss_pred             cchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhh
Confidence            5678888999999999 9999998773 2   26888887443


No 52 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=28.18  E-value=29  Score=26.17  Aligned_cols=18  Identities=33%  Similarity=0.488  Sum_probs=14.9

Q ss_pred             CCccccccCCCCCCCCcH
Q 035527          450 QNFEFIPFGAGRRICTGL  467 (522)
Q Consensus       450 ~~~~~~pFg~G~r~C~G~  467 (522)
                      .-...+|||.|.-.|+|.
T Consensus       103 ~gss~~p~GaGaAaC~aA  120 (131)
T PF14459_consen  103 CGSSNNPFGAGAAACFAA  120 (131)
T ss_pred             cCcccCCcCccHHHHHHH
Confidence            345789999999999875


No 53 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=23.78  E-value=1.2e+02  Score=18.19  Aligned_cols=19  Identities=16%  Similarity=0.434  Sum_probs=12.5

Q ss_pred             HHHHHHHh-hCcHHHHHHHH
Q 035527          336 EWAMTNLM-KNPEAMKKVQK  354 (522)
Q Consensus       336 ~~~l~~L~-~~p~~~~~lr~  354 (522)
                      --.+..++ +||++++.+++
T Consensus        16 ~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   16 QSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHHhChhHHHHHHh
Confidence            33444444 79999888764


No 54 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=23.49  E-value=2.1e+02  Score=18.34  Aligned_cols=35  Identities=17%  Similarity=0.272  Sum_probs=25.2

Q ss_pred             HHHHHhhCCeEEEeecC----eeEEEecCHHHHHHHHHh
Q 035527           57 WKLSKQYGPIFSLRLGF----RPTIVISSAKLAKEAFKT   91 (522)
Q Consensus        57 ~~~~~kyG~v~~~~~~~----~~~vvi~dp~~~~~i~~~   91 (522)
                      .++-.+||+|-.+.+..    .-+|-..+++.++.....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            46678999999887644    345666889988888763


No 55 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=23.43  E-value=37  Score=22.09  Aligned_cols=11  Identities=45%  Similarity=0.939  Sum_probs=9.2

Q ss_pred             cccCCCCCCCC
Q 035527          455 IPFGAGRRICT  465 (522)
Q Consensus       455 ~pFg~G~r~C~  465 (522)
                      .+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            46999999993


No 56 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=22.27  E-value=54  Score=23.84  Aligned_cols=20  Identities=25%  Similarity=0.414  Sum_probs=17.8

Q ss_pred             HHHHHHHHHHHhceeecCCC
Q 035527          473 IVELALANLLYKLDWTMPHG  492 (522)
Q Consensus       473 ~~~~~la~ll~~f~~~~~~~  492 (522)
                      -|+-++..+|+-|||.+.+-
T Consensus        61 ~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   61 CIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHhccCCceeeec
Confidence            57889999999999999864


No 57 
>PF08138 Sex_peptide:  Sex peptide (SP) family;  InterPro: IPR012608 This family consists of Sex Peptides (SP) that are found in Drosophila. On mating, Drosophila females decreases her remating rate and increases her egg-laying rate due, in part, to the transfer of SP from the male to the female. SP are found in seminal fluids transferred from the male to the female during mating. The male seminal fluid proteins are referred to as accessory gland proteins (Acps). The SP is one of the most interesting Acps and plays an important role in reproduction [].; GO: 0005179 hormone activity, 0046008 regulation of female receptivity, post-mating, 0005576 extracellular region; PDB: 2LAQ_A.
Probab=21.99  E-value=43  Score=21.57  Aligned_cols=25  Identities=16%  Similarity=-0.012  Sum_probs=4.0

Q ss_pred             HHHHHHHHHhhhccccCCCCCCCCC
Q 035527           12 LPIFLLFLLQKHRKNTRAKLPPGPP   36 (522)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~ppgp~   36 (522)
                      ++.++..+.+...++......|+|.
T Consensus        13 llGla~s~~wp~~~r~~~~~i~sp~   37 (56)
T PF08138_consen   13 LLGLAQSWEWPWQRRTTKFPIPSPN   37 (56)
T ss_dssp             ---------S---S---S-SSSS-S
T ss_pred             HHHHHhcccccccCCCCCCCCCCCC
Confidence            3334444444444434444555554


No 58 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=21.69  E-value=3.3e+02  Score=19.88  Aligned_cols=49  Identities=14%  Similarity=0.143  Sum_probs=39.5

Q ss_pred             ChHHHHHHHHH-HHhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhc
Q 035527          313 TFDSIKSTIME-NIAAMDTIKVTLEWAMTNLMKNPEAMKKVQKEVRYVVK  361 (522)
Q Consensus       313 ~~~~i~~~~~~-~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~  361 (522)
                      +.+........ ++--++.++....-.+.+-++||+...++.+++.+-+.
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            33444455555 88999999999999999999999999999998876543


No 59 
>PRK05933 type III secretion system protein; Validated
Probab=21.20  E-value=89  Score=29.19  Aligned_cols=43  Identities=12%  Similarity=0.157  Sum_probs=32.9

Q ss_pred             HHHHHHHHhccCCCCC-CCcccc---cccceeecEEeCCCcEEEEec
Q 035527          377 LKAVVKETLRFQPAAQ-FLPRET---TERCVIDGYHIPAKTTVFVNV  419 (522)
Q Consensus       377 l~a~i~EtlRl~p~~~-~~~R~~---~~d~~~~g~~ip~G~~v~~~~  419 (522)
                      .+--|+|.|+|.+... .+-|.+   .-|+.++|..|.+|..|.++-
T Consensus       317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVdd  363 (372)
T PRK05933        317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALGD  363 (372)
T ss_pred             ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEECC
Confidence            4566999999998766 554553   345677999999999998863


Done!