Your job contains 1 sequence.
>035534
MIGWEDVYKVIVAMVPLYFALMLGYGSVKWWKIIAPEECAAINRLVCYFTLPLFTIEFTT
HVDPFNMNYRFIGADAISKLIIVIVLAFWSMCSKKGSYFSWCITNFSLCTLTNTLVLGVP
LMKAMYGQMAVDLVVQSSVFQSIVWLTIFLFVLEFRRSGNDSKDLEEGHVTSSSRPPFWH
LMKVVWLKLAKNPNSYACVIGLAWAFVANRWHFKLPSIIEGSILIMSKAGTGTAMFSMGE
LGEKLLACGPGLTALGMVLKFIAGPAAMAIGSIAAGLHGDVLRVSIIQVTT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035534
(291 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2171392 - symbol:PIN5 "AT5G16530" species:3702... 1048 6.5e-106 1
TAIR|locus:2038781 - symbol:PIN4 "AT2G01420" species:3702... 446 2.9e-72 2
TAIR|locus:2013975 - symbol:PIN3 "AT1G70940" species:3702... 430 1.1e-69 2
TAIR|locus:2175559 - symbol:EIR1 "AT5G57090" species:3702... 435 2.5e-68 2
TAIR|locus:2201225 - symbol:PIN7 "AT1G23080" species:3702... 428 3.8e-68 2
UNIPROTKB|Q5SMQ9 - symbol:PIN1 "Auxin efflux carrier comp... 427 2.3e-66 2
TAIR|locus:2035037 - symbol:PIN1 "AT1G73590" species:3702... 423 3.7e-64 2
TAIR|locus:2025312 - symbol:PIN6 "AT1G77110" species:3702... 379 4.0e-58 2
TAIR|locus:2147835 - symbol:PIN8 "AT5G15100" species:3702... 343 1.8e-50 2
UNIPROTKB|P0AA49 - symbol:yfdV "YfdV AEC Transporter" spe... 88 0.00054 2
>TAIR|locus:2171392 [details] [associations]
symbol:PIN5 "AT5G16530" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS]
[GO:0009926 "auxin polar transport" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0010252 "auxin
homeostasis" evidence=IMP] [GO:0080161 "auxin transmembrane
transporter activity" evidence=IDA] [GO:0080162 "intracellular
auxin transport" evidence=IDA] [GO:0009555 "pollen development"
evidence=IGI;IMP] InterPro:IPR004776 Pfam:PF03547 GO:GO:0005783
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0009555 EMBL:AB005242 GO:GO:0010252 eggNOG:NOG85075
HOGENOM:HOG000238224 KO:K13947 InterPro:IPR014024
TIGRFAMs:TIGR00946 IPI:IPI00541520 RefSeq:NP_197157.4
UniGene:At.54868 ProteinModelPortal:Q9FFD0
EnsemblPlants:AT5G16530.1 GeneID:831515 KEGG:ath:AT5G16530
GeneFarm:3030 TAIR:At5g16530 InParanoid:Q9FFD0 OMA:ILIMSKA
PhylomeDB:Q9FFD0 ProtClustDB:CLSN2720146 Genevestigator:Q9FFD0
GermOnline:AT5G16530 GO:GO:0080161 GO:GO:0080162 Uniprot:Q9FFD0
Length = 351
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 207/303 (68%), Positives = 239/303 (78%)
Query: 1 MIGWEDVYKVIVAMVPLYFALMLGYGSVKWWKIIAPEECAAINRLVCYFTLPLFTIEFTT 60
MI DVYKVI AMVPLY AL+LGYGSVKWW I ++C AINRLVCYFTLPLFTIEFT
Sbjct: 1 MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTA 60
Query: 61 HVDPFNMNYRFIGADAISKLIIVIVLAFWSMCSKKGSYFSWCITNFSLCTLTNTLVLGVP 120
HVDPFNMNYRFI AD +SK+IIV VLA W+ S KGSY W IT+FSLCTLTN+LV+GVP
Sbjct: 61 HVDPFNMNYRFIAADVLSKVIIVTVLALWAKYSNKGSY-CWSITSFSLCTLTNSLVVGVP 119
Query: 121 LMKAMYGQMAVDLVVQSSVFQSIVWLTIFLFVLEFRRSG---NDSKDLEEGHVTSSS--- 174
L KAMYGQ AVDLVVQSSVFQ+IVWLT+ LFVLEFR++G N+ D++ ++ S
Sbjct: 120 LAKAMYGQQAVDLVVQSSVFQAIVWLTLLLFVLEFRKAGFSSNNISDVQVDNINIESGKR 179
Query: 175 ------RPPFWHLMKVVWLKLAKNPNSYACVIGLAWAFVANRWHFKLPSIIEGSILIMSK 228
F +M +VWLKLA NPN Y+C++G+AWAF++NRWH +LP I+EGSILIMSK
Sbjct: 180 ETVVVGEKSFLEVMSLVWLKLATNPNCYSCILGIAWAFISNRWHLELPGILEGSILIMSK 239
Query: 229 AGTGTAMFSMG---ELGEKLLACGPGLTALGMVLKFIAGPAAMAIGSIAAGLHGDVLRVS 285
AGTGTAMF+MG L EKL+ CG LT +GMVLKFIAGPAAMAIGSI GLHGDVLRV+
Sbjct: 240 AGTGTAMFNMGIFMALQEKLIVCGTSLTVMGMVLKFIAGPAAMAIGSIVLGLHGDVLRVA 299
Query: 286 IIQ 288
IIQ
Sbjct: 300 IIQ 302
>TAIR|locus:2038781 [details] [associations]
symbol:PIN4 "AT2G01420" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS]
[GO:0009926 "auxin polar transport" evidence=ISS;RCA;IMP]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0048364 "root
development" evidence=IMP] [GO:0007389 "pattern specification
process" evidence=IGI;RCA] [GO:0000271 "polysaccharide biosynthetic
process" evidence=RCA] [GO:0008361 "regulation of cell size"
evidence=RCA] [GO:0009825 "multidimensional cell growth"
evidence=RCA] [GO:0009932 "cell tip growth" evidence=RCA]
[GO:0010015 "root morphogenesis" evidence=RCA] [GO:0010218
"response to far red light" evidence=RCA] [GO:0010817 "regulation
of hormone levels" evidence=RCA] [GO:0040007 "growth" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009734 GO:GO:0009926 GO:GO:0055085
GO:GO:0048364 EMBL:AC006200 GO:GO:0007389 EMBL:AC005560
HOGENOM:HOG000238224 KO:K13947 InterPro:IPR014024
TIGRFAMs:TIGR00946 EMBL:AF087016 EMBL:AY091009 EMBL:BT008691
IPI:IPI00527431 IPI:IPI00531366 PIR:E84424 RefSeq:NP_565261.1
RefSeq:NP_849923.1 UniGene:At.24881 ProteinModelPortal:Q8RWZ6
PaxDb:Q8RWZ6 PRIDE:Q8RWZ6 EnsemblPlants:AT2G01420.2 GeneID:814670
KEGG:ath:AT2G01420 GeneFarm:3022 TAIR:At2g01420 eggNOG:NOG283588
InParanoid:Q8RWZ6 OMA:KASHDAK PhylomeDB:Q8RWZ6
ProtClustDB:CLSN2687655 Genevestigator:Q8RWZ6 GermOnline:AT2G01420
Uniprot:Q8RWZ6
Length = 616
Score = 446 (162.1 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 79/156 (50%), Positives = 111/156 (71%)
Query: 1 MIGWEDVYKVIVAMVPLYFALMLGYGSVKWWKIIAPEECAAINRLVCYFTLPLFTIEFTT 60
MI W D+Y V+ A+VPLY A++L YGSV+WWKI +P++C+ INR V F +PL + F +
Sbjct: 1 MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 HVDPFNMNYRFIGADAISKLIIVIVLAFWSMCSKKGSYFSWCITNFSLCTLTNTLVLGVP 120
DP+ MN+RF+ AD + K+I++++LA W+ +K GS W IT FSL TL NTLV+G+P
Sbjct: 61 TNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGS-LEWMITIFSLSTLPNTLVMGIP 119
Query: 121 LMKAMYGQMAVDLVVQSSVFQSIVWLTIFLFVLEFR 156
L+ AMYG A L+VQ V Q I+W T+ LF+ E+R
Sbjct: 120 LLIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYR 155
Score = 303 (111.7 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 56/111 (50%), Positives = 78/111 (70%)
Query: 181 LMKVVWLKLAKNPNSYACVIGLAWAFVANRWHFKLPSIIEGSILIMSKAGTGTAMFSMG- 239
++ +VW KL +NPN+Y+ +IGL WA VA RWH +P I++ SI I+S AG G AMFS+G
Sbjct: 459 ILIMVWRKLIRNPNTYSSLIGLIWALVAYRWHVAMPKILQQSISILSDAGLGMAMFSLGL 518
Query: 240 --ELGEKLLACGPGLTALGMVLKFIAGPAAMAIGSIAAGLHGDVLRVSIIQ 288
L K++ACG + M ++FI GPA MA+ IA GLHGD+LR++I+Q
Sbjct: 519 FMALQPKIIACGNSVATFAMAVRFITGPAIMAVAGIAIGLHGDLLRIAIVQ 569
>TAIR|locus:2013975 [details] [associations]
symbol:PIN3 "AT1G70940" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS]
[GO:0009926 "auxin polar transport" evidence=ISS;RCA;IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009606 "tropism"
evidence=IMP] [GO:0012506 "vesicle membrane" evidence=IDA]
[GO:0016328 "lateral plasma membrane" evidence=IDA] [GO:0007389
"pattern specification process" evidence=IGI;RCA] [GO:0010082
"regulation of root meristem growth" evidence=IGI] [GO:0048364
"root development" evidence=IGI;IMP] [GO:0009630 "gravitropism"
evidence=TAS] [GO:0009986 "cell surface" evidence=IDA] [GO:0048766
"root hair initiation" evidence=IMP] [GO:0048767 "root hair
elongation" evidence=RCA;IMP] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0009958 "positive gravitropism"
evidence=IMP] [GO:0010315 "auxin efflux" evidence=IMP] [GO:0000271
"polysaccharide biosynthetic process" evidence=RCA] [GO:0008356
"asymmetric cell division" evidence=RCA] [GO:0008361 "regulation of
cell size" evidence=RCA] [GO:0009825 "multidimensional cell growth"
evidence=RCA] [GO:0009932 "cell tip growth" evidence=RCA]
[GO:0010015 "root morphogenesis" evidence=RCA] [GO:0010218
"response to far red light" evidence=RCA] [GO:0010817 "regulation
of hormone levels" evidence=RCA] [GO:0040007 "growth" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009986 GO:GO:0009926 GO:GO:0055085
GO:GO:0009958 GO:GO:0010315 GO:GO:0048767 GO:GO:0009416
GO:GO:0012506 GO:GO:0016328 GO:GO:0007389 EMBL:AC008148
GO:GO:0048766 GO:GO:0010082 eggNOG:NOG330901 HOGENOM:HOG000238224
KO:K13947 InterPro:IPR014024 TIGRFAMs:TIGR00946 EMBL:AF087818
EMBL:AY136327 EMBL:BT002085 IPI:IPI00534879 PIR:G96733
RefSeq:NP_177250.1 UniGene:At.11573 ProteinModelPortal:Q9S7Z8
STRING:Q9S7Z8 TCDB:2.A.69.1.4 PaxDb:Q9S7Z8 PRIDE:Q9S7Z8
EnsemblPlants:AT1G70940.1 GeneID:843432 KEGG:ath:AT1G70940
GeneFarm:3021 TAIR:At1g70940 InParanoid:Q9S7Z8 OMA:VAFRWHV
PhylomeDB:Q9S7Z8 ProtClustDB:CLSN2682831 Genevestigator:Q9S7Z8
GermOnline:AT1G70940 Uniprot:Q9S7Z8
Length = 640
Score = 430 (156.4 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 76/156 (48%), Positives = 109/156 (69%)
Query: 1 MIGWEDVYKVIVAMVPLYFALMLGYGSVKWWKIIAPEECAAINRLVCYFTLPLFTIEFTT 60
MI W D+Y V+ A++PLY A++L YGSV+WWKI +P++C+ INR V F +PL + F +
Sbjct: 1 MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 HVDPFNMNYRFIGADAISKLIIVIVLAFWSMCSKKGSYFSWCITNFSLCTLTNTLVLGVP 120
+P+ MN RFI AD + K+I++ +L W+ ++ GS W IT FSL TL NTLV+G+P
Sbjct: 61 TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGS-LEWSITIFSLSTLPNTLVMGIP 119
Query: 121 LMKAMYGQMAVDLVVQSSVFQSIVWLTIFLFVLEFR 156
L+ AMYG+ + L+VQ V Q I+W T+ LF+ EFR
Sbjct: 120 LLIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFR 155
Score = 299 (110.3 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 57/111 (51%), Positives = 78/111 (70%)
Query: 181 LMKVVWLKLAKNPNSYACVIGLAWAFVANRWHFKLPSIIEGSILIMSKAGTGTAMFSMG- 239
++ +VW KL +NPN+Y+ +IGL WA VA RWH +P II+ SI I+S AG G AMFS+G
Sbjct: 483 ILIMVWRKLIRNPNTYSSLIGLIWALVAFRWHVAMPKIIQQSISILSDAGLGMAMFSLGL 542
Query: 240 --ELGEKLLACGPGLTALGMVLKFIAGPAAMAIGSIAAGLHGDVLRVSIIQ 288
L KL+ACG + M ++F+ GPA MA+ +IA GL GD+LRV+I+Q
Sbjct: 543 FMALQPKLIACGNSVATFAMAVRFLTGPAVMAVAAIAIGLRGDLLRVAIVQ 593
Score = 55 (24.4 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 25/93 (26%), Positives = 41/93 (44%)
Query: 75 DAISKLIIVIVLAFWSMCSKKGSYFSWCITNFSLCTLTNTLV--LGVPLMKAMY----GQ 128
D + L VI L + +M GS W I + C+ N V VPL+ +
Sbjct: 6 DLYTVLTAVIPL-YVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNP 64
Query: 129 MAVDL-VVQSSVFQSIVWLTIFLFVLEFRRSGN 160
A++L + + Q I+ L++ + F RSG+
Sbjct: 65 YAMNLRFIAADTLQKIIMLSLLVLWANFTRSGS 97
>TAIR|locus:2175559 [details] [associations]
symbol:EIR1 "AT5G57090" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS]
[GO:0009926 "auxin polar transport" evidence=ISS;RCA;IMP]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0000323 "lytic vacuole"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009749 "response to glucose stimulus" evidence=IEP]
[GO:0008361 "regulation of cell size" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009733 "response to auxin
stimulus" evidence=IMP;RCA] [GO:0043481 "anthocyanin accumulation
in tissues in response to UV light" evidence=RCA] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
[GO:0048364 "root development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IMP] [GO:0009925 "basal plasma membrane"
evidence=IDA] [GO:0009958 "positive gravitropism" evidence=IMP]
[GO:0010329 "auxin efflux transmembrane transporter activity"
evidence=IDA] InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009926 GO:GO:0009723
GO:GO:0009749 GO:GO:0010329 GO:GO:0009958 EMBL:AB023042
GO:GO:0009925 HOGENOM:HOG000238224 KO:K13947 GO:GO:0000323
InterPro:IPR014024 TIGRFAMs:TIGR00946 EMBL:AF056026 EMBL:AF087459
EMBL:AF093241 EMBL:AF086906 EMBL:AF086907 EMBL:AY078965
EMBL:BT001152 IPI:IPI00524610 PIR:T51808 RefSeq:NP_568848.1
UniGene:At.9674 ProteinModelPortal:Q9LU77 IntAct:Q9LU77
STRING:Q9LU77 TCDB:2.A.69.1.2 PaxDb:Q9LU77 PRIDE:Q9LU77
EnsemblPlants:AT5G57090.1 GeneID:835813 KEGG:ath:AT5G57090
GeneFarm:3020 TAIR:At5g57090 eggNOG:NOG264531 InParanoid:Q9LU77
OMA:AMYGDFS PhylomeDB:Q9LU77 ProtClustDB:CLSN2690032
Genevestigator:Q9LU77 GermOnline:AT5G57090 Uniprot:Q9LU77
Length = 647
Score = 435 (158.2 bits), Expect = 2.5e-68, Sum P(2) = 2.5e-68
Identities = 78/156 (50%), Positives = 109/156 (69%)
Query: 1 MIGWEDVYKVIVAMVPLYFALMLGYGSVKWWKIIAPEECAAINRLVCYFTLPLFTIEFTT 60
MI +D+Y V+ AMVPLY A++L YGSV+WW I P++C+ INR V F +PL + F +
Sbjct: 1 MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60
Query: 61 HVDPFNMNYRFIGADAISKLIIVIVLAFWSMCSKKGSYFSWCITNFSLCTLTNTLVLGVP 120
DP+ MNY F+ AD++ K++I+ L W S++GS W IT FSL TL NTLV+G+P
Sbjct: 61 SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGS-LEWMITLFSLSTLPNTLVMGIP 119
Query: 121 LMKAMYGQMAVDLVVQSSVFQSIVWLTIFLFVLEFR 156
L++AMYG + +L+VQ V QSI+W T+ LF+ EFR
Sbjct: 120 LLRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFR 155
Score = 281 (104.0 bits), Expect = 2.5e-68, Sum P(2) = 2.5e-68
Identities = 57/139 (41%), Positives = 86/139 (61%)
Query: 159 GNDSKDLEEGHV--TSSSRPP---FWHLMKV-VWLKLAKNPNSYACVIGLAWAFVANRWH 212
G D+E+G PP L+ + VW KL +NPN+Y+ + GLAW+ V+ +W+
Sbjct: 462 GKKGSDVEDGGPGPRKQQMPPASVMTRLILIMVWRKLIRNPNTYSSLFGLAWSLVSFKWN 521
Query: 213 FKLPSIIEGSILIMSKAGTGTAMFSMG---ELGEKLLACGPGLTALGMVLKFIAGPAAMA 269
K+P+I+ GSI I+S AG G AMFS+G L K++ACG + M ++F+ GPA +A
Sbjct: 522 IKMPTIMSGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAGFAMAVRFLTGPAVIA 581
Query: 270 IGSIAAGLHGDVLRVSIIQ 288
SIA G+ GD+L ++I+Q
Sbjct: 582 ATSIAIGIRGDLLHIAIVQ 600
>TAIR|locus:2201225 [details] [associations]
symbol:PIN7 "AT1G23080" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS]
[GO:0009926 "auxin polar transport" evidence=ISS;RCA;IMP]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0009942 "longitudinal
axis specification" evidence=IMP] [GO:0007389 "pattern
specification process" evidence=IGI;RCA] [GO:0048364 "root
development" evidence=IGI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0010329 "auxin efflux transmembrane transporter
activity" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0000271 "polysaccharide
biosynthetic process" evidence=RCA] [GO:0008361 "regulation of cell
size" evidence=RCA] [GO:0009825 "multidimensional cell growth"
evidence=RCA] [GO:0009932 "cell tip growth" evidence=RCA]
[GO:0010015 "root morphogenesis" evidence=RCA] [GO:0010817
"regulation of hormone levels" evidence=RCA] [GO:0040007 "growth"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048767 "root hair
elongation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506
GO:GO:0009926 GO:GO:0010329 GO:GO:0048364 GO:GO:0009942
EMBL:AC002311 HOGENOM:HOG000238224 KO:K13947 InterPro:IPR014024
TIGRFAMs:TIGR00946 ProtClustDB:CLSN2682831 EMBL:AF087820
EMBL:AY052356 IPI:IPI00535539 IPI:IPI00548100 PIR:A86365
RefSeq:NP_564189.1 RefSeq:NP_849700.1 UniGene:At.10543
ProteinModelPortal:Q940Y5 IntAct:Q940Y5 STRING:Q940Y5
TCDB:2.A.69.1.3 PaxDb:Q940Y5 PRIDE:Q940Y5 EnsemblPlants:AT1G23080.1
GeneID:838916 KEGG:ath:AT1G23080 GeneFarm:3028 TAIR:At1g23080
eggNOG:NOG317016 InParanoid:Q940Y5 OMA:EESCAMA PhylomeDB:Q940Y5
Genevestigator:Q940Y5 GermOnline:AT1G23080 Uniprot:Q940Y5
Length = 619
Score = 428 (155.7 bits), Expect = 3.8e-68, Sum P(2) = 3.8e-68
Identities = 76/156 (48%), Positives = 109/156 (69%)
Query: 1 MIGWEDVYKVIVAMVPLYFALMLGYGSVKWWKIIAPEECAAINRLVCYFTLPLFTIEFTT 60
MI W D+Y V+ A++PLY A++L YGSV+WWKI +P++C+ INR V F +PL + F +
Sbjct: 1 MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 HVDPFNMNYRFIGADAISKLIIVIVLAFWSMCSKKGSYFSWCITNFSLCTLTNTLVLGVP 120
+P+ MN RFI AD + KLI++ +L W+ ++ GS W IT FSL TL NTLV+G+P
Sbjct: 61 SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGS-LEWSITIFSLSTLPNTLVMGIP 119
Query: 121 LMKAMYGQMAVDLVVQSSVFQSIVWLTIFLFVLEFR 156
L+ AMYG+ + L+VQ V Q I+W T+ LF+ E+R
Sbjct: 120 LLIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYR 155
Score = 283 (104.7 bits), Expect = 3.8e-68, Sum P(2) = 3.8e-68
Identities = 55/111 (49%), Positives = 75/111 (67%)
Query: 181 LMKVVWLKLAKNPNSYACVIGLAWAFVANRWHFKLPSIIEGSILIMSKAGTGTAMFSMG- 239
++ +VW KL +NPN+Y+ +IGL WA VA RW +P II+ SI I+S AG G AMFS+G
Sbjct: 462 ILIMVWRKLIRNPNTYSSLIGLIWALVAFRWDVAMPKIIQQSISILSDAGLGMAMFSLGL 521
Query: 240 --ELGEKLLACGPGLTALGMVLKFIAGPAAMAIGSIAAGLHGDVLRVSIIQ 288
L KL+ACG M ++F GPA MA+ ++A GL GD+LRV+I+Q
Sbjct: 522 FMALQPKLIACGNSTATFAMAVRFFTGPAVMAVAAMAIGLRGDLLRVAIVQ 572
Score = 58 (25.5 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 25/93 (26%), Positives = 41/93 (44%)
Query: 75 DAISKLIIVIVLAFWSMCSKKGSYFSWCITNFSLCTLTNTLV--LGVPLMKAMY----GQ 128
D + L VI L + +M GS W I + C+ N V VPL+ +
Sbjct: 6 DLYTVLTAVIPL-YVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISSNNP 64
Query: 129 MAVDL-VVQSSVFQSIVWLTIFLFVLEFRRSGN 160
A++L + + Q ++ LT+ + F RSG+
Sbjct: 65 YAMNLRFIAADTLQKLIMLTLLIIWANFTRSGS 97
>UNIPROTKB|Q5SMQ9 [details] [associations]
symbol:PIN1 "Auxin efflux carrier component 1"
species:39947 "Oryza sativa Japonica Group" [GO:0005215
"transporter activity" evidence=IMP] [GO:0006810 "transport"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009921 "auxin efflux carrier complex"
evidence=IMP] [GO:0016020 "membrane" evidence=ISS] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0048830 "adventitious root
development" evidence=IMP] InterPro:IPR004776 Pfam:PF03547
GO:GO:0016021 GO:GO:0009723 GO:GO:0010329 GO:GO:0005215
GO:GO:0009958 GO:GO:0010315 GO:GO:0048830 GO:GO:0009925
EMBL:AP005297 EMBL:AF056027 EMBL:AP004800 PIR:T02876
RefSeq:NP_001048095.1 UniGene:Os.2230
EnsemblPlants:LOC_Os02g50960.1 GeneID:4330700
KEGG:dosa:Os02t0743400-01 KEGG:osa:4330700 Gramene:Q5SMQ9
eggNOG:NOG330901 HOGENOM:HOG000238224 KO:K13947
ProtClustDB:CLSN2679873 GO:GO:0009921 GO:GO:0000323
InterPro:IPR014024 TIGRFAMs:TIGR00946 Uniprot:Q5SMQ9
Length = 595
Score = 427 (155.4 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 78/156 (50%), Positives = 107/156 (68%)
Query: 1 MIGWEDVYKVIVAMVPLYFALMLGYGSVKWWKIIAPEECAAINRLVCYFTLPLFTIEFTT 60
MI D Y V+ AMVPLY A++L YGSVKWW+I P++C+ INR V F +PL + F +
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 HVDPFNMNYRFIGADAISKLIIVIVLAFWSMCSKKGSYFSWCITNFSLCTLTNTLVLGVP 120
+P+ MN RFI AD + KL+++ +L WS S++GS W IT FSL TL NTLV+G+P
Sbjct: 61 TNNPYTMNLRFIAADTLQKLMVLAMLTAWSHLSRRGS-LEWTITLFSLSTLPNTLVMGIP 119
Query: 121 LMKAMYGQMAVDLVVQSSVFQSIVWLTIFLFVLEFR 156
L+K MYG+ + L+VQ V Q I+W T+ LF+ E+R
Sbjct: 120 LLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYR 155
Score = 266 (98.7 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 51/111 (45%), Positives = 75/111 (67%)
Query: 181 LMKVVWLKLAKNPNSYACVIGLAWAFVANRWHFKLPSIIEGSILIMSKAGTGTAMFSMG- 239
++ +VW KL +NPN+Y+ +IGL W+ V RW+F++P+I+ SI I+S AG G AMFS+G
Sbjct: 438 ILIMVWRKLIRNPNTYSSLIGLIWSLVCFRWNFEMPAIVLKSISILSDAGLGMAMFSLGL 497
Query: 240 --ELGEKLLACGPGLTALGMVLKFIAGPAAMAIGSIAAGLHGDVLRVSIIQ 288
L ++ACG + M ++F+AGPA MA S A GL G +L V+I+Q
Sbjct: 498 FMALQPHIIACGNKVATYAMAVRFLAGPAVMAAASFAVGLRGTLLHVAIVQ 548
>TAIR|locus:2035037 [details] [associations]
symbol:PIN1 "AT1G73590" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS;TAS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0048367 "shoot system
development" evidence=IMP] [GO:0016020 "membrane" evidence=ISS]
[GO:0009925 "basal plasma membrane" evidence=IDA] [GO:0048825
"cotyledon development" evidence=IGI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0009640 "photomorphogenesis" evidence=RCA;TAS] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009926 "auxin polar transport"
evidence=RCA;IMP] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA;IMP] [GO:0010338 "leaf formation" evidence=IGI]
[GO:0010358 "leaf shaping" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009505 "plant-type cell wall" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0010229 "inflorescence development" evidence=IMP]
[GO:0048826 "cotyledon morphogenesis" evidence=IMP] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0008361 "regulation of cell size"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009624 "response to nematode" evidence=RCA]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009887
"organ morphogenesis" evidence=RCA] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010014 "meristem
initiation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0048364 "root development"
evidence=IMP;RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048443 "stamen development" evidence=RCA] [GO:0048519
"negative regulation of biological process" evidence=RCA]
InterPro:IPR004776 Pfam:PF03547 UniProt:Q9C6B8 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005737
GO:GO:0009734 GO:GO:0009926 GO:GO:0045177 GO:GO:0055085
GO:GO:0005215 GO:GO:0009640 GO:GO:0048364 GO:GO:0009630
GO:GO:0009505 GO:GO:0010051 GO:GO:0009908 GO:GO:0048830
GO:GO:0009925 GO:GO:0010338 GO:GO:0048826 GO:GO:0010229
GO:GO:0010358 EMBL:AC079676 eggNOG:NOG330901 HOGENOM:HOG000238224
KO:K13947 ProtClustDB:CLSN2679873 GO:GO:0009921 InterPro:IPR014024
TIGRFAMs:TIGR00946 EMBL:AF089084 EMBL:AF089085 EMBL:AF372950
EMBL:AY093960 IPI:IPI00533478 PIR:G96762 RefSeq:NP_177500.1
UniGene:At.10969 ProteinModelPortal:Q9C6B8 DIP:DIP-40041N
IntAct:Q9C6B8 STRING:Q9C6B8 TCDB:2.A.69.1.1 PaxDb:Q9C6B8
PRIDE:Q9C6B8 EnsemblPlants:AT1G73590.1 GeneID:843693
KEGG:ath:AT1G73590 GeneFarm:3019 TAIR:At1g73590 InParanoid:Q9C6B8
OMA:AHYPAPN PhylomeDB:Q9C6B8 Genevestigator:Q9C6B8
GermOnline:AT1G73590
Length = 622
Score = 423 (154.0 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
Identities = 78/156 (50%), Positives = 105/156 (67%)
Query: 1 MIGWEDVYKVIVAMVPLYFALMLGYGSVKWWKIIAPEECAAINRLVCYFTLPLFTIEFTT 60
MI D Y V+ AMVPLY A++L YGSVKWWKI P++C+ INR V F +PL + F
Sbjct: 1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60
Query: 61 HVDPFNMNYRFIGADAISKLIIVIVLAFWSMCSKKGSYFSWCITNFSLCTLTNTLVLGVP 120
+P+ MN RF+ AD++ K+I++ +L W S+ GS W IT FSL TL NTLV+G+P
Sbjct: 61 ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGS-LDWTITLFSLSTLPNTLVMGIP 119
Query: 121 LMKAMYGQMAVDLVVQSSVFQSIVWLTIFLFVLEFR 156
L+K MYG + DL+VQ V Q I+W T+ LF+ E+R
Sbjct: 120 LLKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYR 155
Score = 252 (93.8 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
Identities = 46/111 (41%), Positives = 73/111 (65%)
Query: 181 LMKVVWLKLAKNPNSYACVIGLAWAFVANRWHFKLPSIIEGSILIMSKAGTGTAMFSMG- 239
++ +VW KL +NPNSY+ + G+ W+ ++ +W+ ++P++I SI I+S AG G AMFS+G
Sbjct: 465 ILIMVWRKLIRNPNSYSSLFGITWSLISFKWNIEMPALIAKSISILSDAGLGMAMFSLGL 524
Query: 240 --ELGEKLLACGPGLTALGMVLKFIAGPAAMAIGSIAAGLHGDVLRVSIIQ 288
L +++ACG A ++F+ GPA M + S A GL G +L V+IIQ
Sbjct: 525 FMALNPRIIACGNRRAAFAAAMRFVVGPAVMLVASYAVGLRGVLLHVAIIQ 575
>TAIR|locus:2025312 [details] [associations]
symbol:PIN6 "AT1G77110" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS]
[GO:0009926 "auxin polar transport" evidence=ISS;IMP] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010073 "meristem maintenance" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009734
GO:GO:0009926 GO:GO:0055085 EMBL:AC002291 HOGENOM:HOG000238224
KO:K13947 InterPro:IPR014024 TIGRFAMs:TIGR00946 EMBL:AF087819
IPI:IPI00533868 PIR:A96800 RefSeq:NP_177836.1 UniGene:At.11574
ProteinModelPortal:Q9SQH6 STRING:Q9SQH6 PaxDb:Q9SQH6 PRIDE:Q9SQH6
EnsemblPlants:AT1G77110.1 GeneID:844046 KEGG:ath:AT1G77110
GeneFarm:3027 TAIR:At1g77110 eggNOG:NOG272808 InParanoid:Q9SQH6
OMA:LVVLQCI PhylomeDB:Q9SQH6 ProtClustDB:CLSN2682968
Genevestigator:Q9SQH6 GermOnline:AT1G77110 Uniprot:Q9SQH6
Length = 570
Score = 379 (138.5 bits), Expect = 4.0e-58, Sum P(2) = 4.0e-58
Identities = 70/156 (44%), Positives = 100/156 (64%)
Query: 1 MIGWEDVYKVIVAMVPLYFALMLGYGSVKWWKIIAPEECAAINRLVCYFTLPLFTIEFTT 60
MI + Y V+ AM PLYFA+ + YGSVKW KI P +C+ INR V F +P+ + F +
Sbjct: 1 MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60
Query: 61 HVDPFNMNYRFIGADAISKLIIVIVLAFWSMCSKKGSYFSWCITNFSLCTLTNTLVLGVP 120
+P+ M+ FI AD +SK+ + ++L+ W++ K G W IT FS+ TL NTLV+G+P
Sbjct: 61 QNNPYKMDTMFILADTLSKIFVFVLLSLWAVFFKAGG-LDWLITLFSIATLPNTLVMGIP 119
Query: 121 LMKAMYGQMAVDLVVQSSVFQSIVWLTIFLFVLEFR 156
L++AMYG L+VQ V Q I+W T+ LF+ E R
Sbjct: 120 LLQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELR 155
Score = 240 (89.5 bits), Expect = 4.0e-58, Sum P(2) = 4.0e-58
Identities = 45/111 (40%), Positives = 74/111 (66%)
Query: 181 LMKVVWLKLAKNPNSYACVIGLAWAFVANRWHFKLPSIIEGSILIMSKAGTGTAMFSMG- 239
++ VV KL++NPN+Y+ ++GL W+ ++ +W+ +P+I++ SI I+S AG G AMFS+G
Sbjct: 413 ILTVVGRKLSRNPNTYSSLLGLVWSLISFKWNIPMPNIVDFSIKIISDAGLGMAMFSLGL 472
Query: 240 --ELGEKLLACGPGLTALGMVLKFIAGPAAMAIGSIAAGLHGDVLRVSIIQ 288
L K++ CG +GM+++FI+GP MA S+ GL G L +I+Q
Sbjct: 473 FMALQPKMIPCGAKKATMGMLIRFISGPLFMAGASLLVGLRGSRLHAAIVQ 523
>TAIR|locus:2147835 [details] [associations]
symbol:PIN8 "AT5G15100" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009672 "auxin:hydrogen
symporter activity" evidence=ISS] [GO:0009926 "auxin polar
transport" evidence=ISS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0009555 "pollen development" evidence=IGI;IMP]
[GO:0010252 "auxin homeostasis" evidence=IMP] [GO:0010315 "auxin
efflux" evidence=IMP] InterPro:IPR004776 Pfam:PF03547 GO:GO:0005783
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009555
GO:GO:0055085 GO:GO:0010315 EMBL:AL391146 GO:GO:0010252
eggNOG:NOG85075 HOGENOM:HOG000238224 KO:K13947 InterPro:IPR014024
TIGRFAMs:TIGR00946 IPI:IPI00548971 PIR:T51455 RefSeq:NP_197014.1
UniGene:At.54852 ProteinModelPortal:Q9LFP6 PRIDE:Q9LFP6
EnsemblPlants:AT5G15100.1 GeneID:831362 KEGG:ath:AT5G15100
GeneFarm:3026 TAIR:At5g15100 InParanoid:Q9LFP6 OMA:QSLIWYT
PhylomeDB:Q9LFP6 ProtClustDB:CLSN2916838 Genevestigator:Q9LFP6
GermOnline:AT5G15100 Uniprot:Q9LFP6
Length = 367
Score = 343 (125.8 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 63/158 (39%), Positives = 98/158 (62%)
Query: 1 MIGWEDVYKVIVAMVPLYFALMLGYGSVKWWKIIAPEECAAINRLVCYFTLPLFTIEFTT 60
MI W D+Y V+ A VPLY ++ LG+ S + K+ +PE+CA IN+ V F++PL + + +
Sbjct: 1 MISWLDIYHVVSATVPLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIIS 60
Query: 61 HVDPFNMNYRFIGADAISKLIIVIVLA----FWSMCSKKGSYFSWCITNFSLCTLTNTLV 116
+PF M+ + I +D + K ++V+VLA FW +G W IT S+ L NTL+
Sbjct: 61 ENNPFKMSPKLILSDILQKFLVVVVLAMVLRFWHPTGGRGGKLGWVITGLSISVLPNTLI 120
Query: 117 LGVPLMKAMYGQMAVDLVVQSSVFQSIVWLTIFLFVLE 154
LG+P++ A+YG A ++ Q V QS++W TI LF+ E
Sbjct: 121 LGMPILSAIYGDEAASILEQIVVLQSLIWYTILLFLFE 158
Score = 199 (75.1 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 44/131 (33%), Positives = 71/131 (54%)
Query: 161 DSKDLEEGHVTSSSRPPFWHLMKVVWLKLAKNPNSYACVIGLAWAFVANRWHFKLPSIIE 220
+ +D EE + + ++ W KL NPN+YA +IG+ WA + R + LP +I+
Sbjct: 190 EEEDEEEVAIVRTRSVGTMKILLKAWRKLIINPNTYATLIGIIWATLHFRLGWNLPEMID 249
Query: 221 GSILIMSKAGTGTAMFSMGEL---GEKLLACGPGLTALGMVLKFIAGPAAMAIGSIAAGL 277
SI ++S G G AMFS+G ++ACG + + M+LKF+ GPA M + L
Sbjct: 250 KSIHLLSDGGLGMAMFSLGLFMASQSSIIACGTKMAIITMLLKFVLGPALMIASAYCIRL 309
Query: 278 HGDVLRVSIIQ 288
+ +V+I+Q
Sbjct: 310 KSTLFKVAILQ 320
>UNIPROTKB|P0AA49 [details] [associations]
symbol:yfdV "YfdV AEC Transporter" species:83333
"Escherichia coli K-12" [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR004776 Pfam:PF03547 GO:GO:0016021 GO:GO:0005886
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0055085 eggNOG:COG0679 KO:K07088
PIR:A65011 RefSeq:NP_416873.1 RefSeq:YP_490614.1
ProteinModelPortal:P0AA49 IntAct:P0AA49 PRIDE:P0AA49 DNASU:949110
EnsemblBacteria:EBESCT00000003302 EnsemblBacteria:EBESCT00000016557
GeneID:12930555 GeneID:949110 KEGG:ecj:Y75_p2339 KEGG:eco:b2372
PATRIC:32120123 EchoBASE:EB3896 EcoGene:EG14144
HOGENOM:HOG000122890 OMA:IWNTFFR ProtClustDB:PRK09903
BioCyc:EcoCyc:B2372-MONOMER BioCyc:ECOL316407:JW2369-MONOMER
Genevestigator:P0AA49 Uniprot:P0AA49
Length = 314
Score = 88 (36.0 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 41/175 (23%), Positives = 78/175 (44%)
Query: 14 MVPLYFALMLGYGSVKWWKIIAPEECAAINRLVCYFTLPLFTIEFTTHVDPFNMNYRFIG 73
++P+ ++LGY S + + + ++ A N+LV + LP T + M +
Sbjct: 9 LLPIIVIMLLGYFSGRR-ETFSEDQARAFNKLVLNYALPAALFVSITRANR-EMIFADTR 66
Query: 74 ADAISKLIIVIVLAF-WSMCSKKGSYFSWCITNFSLCTL---TNTL-VLGVPLMKAMYGQ 128
+S ++IV F W C K +F ++C L + T+ LG ++ +YG
Sbjct: 67 LTLVSLVVIVGCFFFSWFGCYK---FFKRTHAEAAVCALIAGSPTIGFLGFAVLDPIYGD 123
Query: 129 -MAVDLVVQS-SVFQSIVWLTIFLFVLEFRRSGNDSKDLEE--GHVTSSSRPPFW 179
++ LVV S+ + + + I L++L SG D K ++++ P W
Sbjct: 124 SVSTGLVVAIISIIVNAITIPIGLYLLN-PSSGADGKKNSNLSALISAAKEPVVW 177
Score = 65 (27.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 24/102 (23%), Positives = 47/102 (46%)
Query: 187 LKLAKNPNSYACVIGLAWAFVANRWHFKLPSIIEGSILIMSKAGTGTAMFSMG-ELGEKL 245
+ AK P +A V+ V K+P+ + + +++KA +G A+F+ G L
Sbjct: 168 ISAAKEPVVWAPVLATILVLVG----VKIPAAWDPTFNLIAKANSGVAVFAAGLTLAAHK 223
Query: 246 LACGPGLTALGMVLKFIAGPAAMAIGSIAAGLHGDVLRVSII 287
+ A LK I P A+ + +A L+ + L++ ++
Sbjct: 224 FEFSAEI-AYNTFLKLILMPLALLLVGMACHLNSEHLQMMVL 264
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.139 0.447 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 291 291 0.00089 115 3 11 22 0.42 33
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 614 (65 KB)
Total size of DFA: 227 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.79u 0.10s 20.89t Elapsed: 00:00:01
Total cpu time: 20.79u 0.10s 20.89t Elapsed: 00:00:01
Start: Thu May 9 20:18:37 2013 End: Thu May 9 20:18:38 2013