Query 035536
Match_columns 445
No_of_seqs 319 out of 2336
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 03:49:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035536.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035536hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13947 GUB_WAK_bind: Wall-as 99.9 8E-27 1.7E-31 193.5 10.8 104 38-143 1-106 (106)
2 PF08488 WAK: Wall-associated 99.2 1E-10 2.2E-15 95.5 9.1 97 169-273 1-102 (103)
3 KOG1187 Serine/threonine prote 99.1 3.8E-11 8.2E-16 120.7 4.7 62 384-445 61-122 (361)
4 KOG1025 Epidermal growth facto 99.0 7.8E-10 1.7E-14 116.3 9.1 55 384-445 689-749 (1177)
5 KOG3653 Transforming growth fa 98.7 5.8E-08 1.3E-12 97.1 8.3 37 404-444 216-252 (534)
6 KOG0196 Tyrosine kinase, EPH ( 98.3 2.4E-07 5.2E-12 97.6 2.1 59 387-445 609-681 (996)
7 KOG0193 Serine/threonine prote 97.9 6.9E-06 1.5E-10 84.8 2.6 49 388-445 389-439 (678)
8 PLN00113 leucine-rich repeat r 97.8 4.1E-05 8.9E-10 87.2 8.4 44 387-433 682-726 (968)
9 KOG1026 Nerve growth factor re 97.7 1.6E-05 3.5E-10 85.1 1.9 42 404-445 492-540 (774)
10 PLN03224 probable serine/threo 97.6 6.7E-05 1.5E-09 78.8 4.6 49 396-444 143-208 (507)
11 KOG2052 Activin A type IB rece 97.5 4.5E-05 9.7E-10 76.3 2.7 30 403-433 216-245 (513)
12 KOG1095 Protein tyrosine kinas 97.1 0.00018 3.9E-09 79.8 1.9 42 403-444 697-745 (1025)
13 KOG1094 Discoidin domain recep 97.0 0.00099 2.2E-08 69.0 6.0 43 403-445 543-586 (807)
14 KOG0194 Protein tyrosine kinas 97.0 0.00077 1.7E-08 69.5 4.4 42 403-444 162-211 (474)
15 KOG0199 ACK and related non-re 96.8 0.0011 2.3E-08 70.1 3.9 53 386-445 105-162 (1039)
16 PHA02988 hypothetical protein; 96.7 0.002 4.3E-08 62.5 4.8 56 384-445 11-69 (283)
17 KOG0658 Glycogen synthase kina 96.7 0.0017 3.6E-08 63.8 3.9 33 401-433 27-60 (364)
18 PF14380 WAK_assoc: Wall-assoc 96.5 0.007 1.5E-07 48.7 6.2 70 198-275 21-93 (94)
19 KOG0192 Tyrosine kinase specif 96.5 0.0022 4.8E-08 64.6 4.0 42 404-445 47-90 (362)
20 PRK09188 serine/threonine prot 96.4 0.003 6.5E-08 63.7 4.1 36 396-431 16-53 (365)
21 PTZ00284 protein kinase; Provi 96.4 0.0032 6.9E-08 65.8 4.5 45 388-432 119-164 (467)
22 cd06638 STKc_myosinIIIA Cataly 96.3 0.0053 1.2E-07 59.0 5.1 47 386-432 6-53 (286)
23 PLN03225 Serine/threonine-prot 96.3 0.0046 9.9E-08 66.3 4.7 37 396-432 130-171 (566)
24 PTZ00283 serine/threonine prot 96.2 0.0046 9.9E-08 65.2 4.2 53 392-444 26-81 (496)
25 cd05104 PTKc_Kit Catalytic dom 96.2 0.0038 8.2E-08 63.2 3.5 47 399-445 36-89 (375)
26 cd06639 STKc_myosinIIIB Cataly 96.1 0.0055 1.2E-07 59.2 4.3 46 387-432 11-57 (291)
27 KOG1219 Uncharacterized conser 96.0 0.0099 2.2E-07 69.5 5.9 36 251-286 3869-3904(4289)
28 KOG1006 Mitogen-activated prot 96.0 0.0024 5.1E-08 60.4 0.8 53 385-444 58-112 (361)
29 cd07877 STKc_p38alpha_MAPK14 C 95.9 0.0058 1.3E-07 61.0 3.3 45 388-432 7-52 (345)
30 cd05105 PTKc_PDGFR_alpha Catal 95.8 0.009 2E-07 61.2 4.1 48 398-445 37-91 (400)
31 cd05107 PTKc_PDGFR_beta Cataly 95.7 0.0068 1.5E-07 62.1 3.1 46 400-445 39-91 (401)
32 KOG0201 Serine/threonine prote 95.7 0.0076 1.7E-07 60.6 3.2 30 403-432 18-48 (467)
33 cd05106 PTKc_CSF-1R Catalytic 95.5 0.009 1.9E-07 60.5 3.0 47 399-445 39-92 (374)
34 PLN00034 mitogen-activated pro 95.5 0.0097 2.1E-07 59.5 3.1 42 403-444 79-122 (353)
35 KOG0197 Tyrosine kinases [Sign 95.4 0.0077 1.7E-07 61.7 2.1 53 385-445 200-252 (468)
36 cd06636 STKc_MAP4K4_6 Catalyti 95.4 0.015 3.2E-07 55.9 4.0 45 388-432 6-51 (282)
37 KOG0580 Serine/threonine prote 95.2 0.015 3.3E-07 54.3 3.1 34 398-431 22-56 (281)
38 KOG4278 Protein tyrosine kinas 95.2 0.01 2.2E-07 62.2 2.2 45 399-444 268-313 (1157)
39 KOG4236 Serine/threonine prote 95.2 0.012 2.7E-07 60.4 2.7 43 403-445 569-614 (888)
40 cd05596 STKc_ROCK Catalytic do 95.2 0.013 2.9E-07 59.1 3.0 39 394-432 39-78 (370)
41 cd07878 STKc_p38beta_MAPK11 Ca 95.2 0.018 3.9E-07 57.2 3.9 35 398-432 15-50 (343)
42 PTZ00263 protein kinase A cata 95.2 0.017 3.6E-07 57.3 3.5 46 399-444 19-68 (329)
43 cd06656 STKc_PAK3 Catalytic do 95.0 0.027 5.7E-07 54.8 4.5 46 399-444 20-66 (297)
44 cd05144 RIO2_C RIO kinase fami 95.0 0.021 4.6E-07 52.2 3.4 30 403-432 20-49 (198)
45 PTZ00036 glycogen synthase kin 95.0 0.029 6.2E-07 58.2 4.7 37 396-432 64-101 (440)
46 KOG4257 Focal adhesion tyrosin 94.9 0.016 3.6E-07 60.7 2.7 46 399-444 390-441 (974)
47 cd05622 STKc_ROCK1 Catalytic d 94.9 0.021 4.5E-07 57.8 3.3 43 390-432 35-78 (371)
48 cd05621 STKc_ROCK2 Catalytic d 94.8 0.023 5.1E-07 57.4 3.5 41 392-432 37-78 (370)
49 cd06614 STKc_PAK Catalytic dom 94.7 0.031 6.6E-07 53.8 3.8 50 394-444 15-65 (286)
50 cd07880 STKc_p38gamma_MAPK12 C 94.7 0.036 7.7E-07 55.3 4.4 36 397-432 14-50 (343)
51 cd06607 STKc_TAO Catalytic dom 94.7 0.035 7.6E-07 54.1 4.2 45 400-444 17-65 (307)
52 cd07876 STKc_JNK2 Catalytic do 94.6 0.034 7.5E-07 55.7 4.1 47 398-444 21-70 (359)
53 cd06647 STKc_PAK_I Catalytic d 94.6 0.04 8.6E-07 53.5 4.3 47 398-444 19-66 (293)
54 cd06657 STKc_PAK4 Catalytic do 94.4 0.037 8E-07 53.8 3.8 41 404-444 26-67 (292)
55 cd07875 STKc_JNK1 Catalytic do 94.4 0.063 1.4E-06 53.9 5.4 36 397-432 23-59 (364)
56 KOG0600 Cdc2-related protein k 94.3 0.018 3.9E-07 58.9 1.4 35 400-434 119-154 (560)
57 cd06654 STKc_PAK1 Catalytic do 94.3 0.054 1.2E-06 52.6 4.6 45 400-444 22-67 (296)
58 TIGR01982 UbiB 2-polyprenylphe 94.3 0.035 7.7E-07 57.5 3.4 36 398-434 118-153 (437)
59 KOG0663 Protein kinase PITSLRE 94.3 0.03 6.6E-07 54.7 2.6 33 400-432 78-111 (419)
60 cd06659 STKc_PAK6 Catalytic do 94.3 0.038 8.3E-07 53.7 3.4 41 404-444 27-68 (297)
61 KOG0581 Mitogen-activated prot 94.2 0.042 9.2E-07 54.2 3.6 51 387-444 75-127 (364)
62 cd06655 STKc_PAK2 Catalytic do 94.2 0.048 1E-06 53.0 4.1 45 400-444 21-66 (296)
63 KOG0605 NDR and related serine 94.2 0.039 8.4E-07 56.9 3.4 40 394-433 137-177 (550)
64 cd06648 STKc_PAK_II Catalytic 94.2 0.06 1.3E-06 51.9 4.6 42 403-444 24-66 (285)
65 PF12662 cEGF: Complement Clr- 94.2 0.048 1.1E-06 31.9 2.3 21 267-299 1-23 (24)
66 cd06618 PKc_MKK7 Catalytic dom 94.1 0.057 1.2E-06 52.3 4.3 34 399-432 16-50 (296)
67 cd06635 STKc_TAO1 Catalytic do 94.1 0.048 1E-06 53.6 3.7 33 400-432 27-60 (317)
68 cd07874 STKc_JNK3 Catalytic do 94.0 0.054 1.2E-06 54.1 3.9 36 397-432 16-52 (355)
69 PTZ00426 cAMP-dependent protei 94.0 0.044 9.4E-07 54.7 3.2 46 399-444 31-81 (340)
70 cd06658 STKc_PAK5 Catalytic do 93.9 0.04 8.7E-07 53.5 2.9 41 404-444 28-69 (292)
71 cd05055 PTKc_PDGFR Catalytic d 93.8 0.044 9.6E-07 53.4 2.9 48 398-445 35-89 (302)
72 cd07851 STKc_p38 Catalytic dom 93.8 0.065 1.4E-06 53.3 4.1 37 396-432 13-50 (343)
73 cd07879 STKc_p38delta_MAPK13 C 93.8 0.073 1.6E-06 52.9 4.4 35 398-432 15-50 (342)
74 KOG0575 Polo-like serine/threo 93.6 0.073 1.6E-06 55.7 4.1 46 400-445 20-69 (592)
75 cd07850 STKc_JNK Catalytic dom 93.4 0.085 1.8E-06 52.7 4.2 36 397-432 15-51 (353)
76 cd05101 PTKc_FGFR2 Catalytic d 93.3 0.062 1.3E-06 52.3 3.0 45 400-444 17-70 (304)
77 KOG0694 Serine/threonine prote 93.2 0.11 2.4E-06 55.2 4.6 38 396-433 366-404 (694)
78 smart00090 RIO RIO-like kinase 93.0 0.079 1.7E-06 50.2 3.1 32 401-432 31-64 (237)
79 KOG0591 NIMA (never in mitosis 92.9 0.022 4.8E-07 54.4 -0.7 42 404-445 25-69 (375)
80 PF03109 ABC1: ABC1 family; I 92.8 0.028 6E-07 47.3 -0.3 35 399-434 13-47 (119)
81 KOG1024 Receptor-like protein 92.6 0.033 7.2E-07 55.5 -0.0 47 398-444 284-337 (563)
82 KOG0574 STE20-like serine/thre 92.6 0.015 3.3E-07 55.8 -2.3 44 400-445 35-79 (502)
83 cd06634 STKc_TAO2 Catalytic do 92.6 0.079 1.7E-06 51.8 2.6 33 400-432 17-50 (308)
84 cd06633 STKc_TAO3 Catalytic do 92.5 0.14 3.1E-06 50.1 4.2 30 403-432 26-56 (313)
85 KOG4250 TANK binding protein k 92.4 0.04 8.8E-07 58.6 0.3 29 404-432 19-48 (732)
86 cd05098 PTKc_FGFR1 Catalytic d 92.4 0.1 2.2E-06 50.8 3.1 46 399-444 19-73 (307)
87 PRK04750 ubiB putative ubiquin 92.2 0.11 2.4E-06 55.1 3.1 35 398-433 120-155 (537)
88 PHA03212 serine/threonine kina 92.2 0.17 3.6E-06 51.6 4.4 35 398-432 92-127 (391)
89 PHA03209 serine/threonine kina 92.1 0.21 4.5E-06 50.1 5.0 36 397-432 65-101 (357)
90 PTZ00266 NIMA-related protein 92.1 0.15 3.3E-06 57.6 4.2 50 396-445 11-63 (1021)
91 KOG4721 Serine/threonine prote 92.1 0.048 1E-06 56.8 0.3 45 386-438 119-163 (904)
92 KOG1989 ARK protein kinase fam 92.0 0.14 3.1E-06 55.6 3.8 43 403-445 42-85 (738)
93 KOG0577 Serine/threonine prote 91.9 0.087 1.9E-06 55.2 1.9 43 388-433 19-62 (948)
94 KOG0198 MEKK and related serin 91.7 0.16 3.4E-06 50.1 3.4 31 403-433 22-53 (313)
95 KOG0200 Fibroblast/platelet-de 91.6 0.16 3.4E-06 55.1 3.7 49 397-445 295-352 (609)
96 PF12191 stn_TNFRSF12A: Tumour 91.4 0.031 6.8E-07 46.4 -1.5 13 340-352 94-106 (129)
97 KOG1035 eIF-2alpha kinase GCN2 91.4 0.055 1.2E-06 60.9 -0.1 37 397-433 478-515 (1351)
98 PHA03211 serine/threonine kina 91.0 0.26 5.6E-06 51.5 4.4 34 398-431 169-203 (461)
99 PF00008 EGF: EGF-like domain 90.6 0.14 3E-06 32.3 1.2 27 253-279 5-31 (32)
100 PRK09605 bifunctional UGMP fam 90.3 0.32 6.9E-06 51.9 4.5 41 388-429 323-363 (535)
101 KOG1166 Mitotic checkpoint ser 90.3 0.2 4.4E-06 56.2 2.9 41 392-432 692-732 (974)
102 KOG0984 Mitogen-activated prot 90.1 0.28 6.1E-06 45.1 3.2 57 388-444 36-94 (282)
103 PTZ00267 NIMA-related protein 89.3 0.36 7.7E-06 50.6 3.8 45 400-444 69-115 (478)
104 PHA03099 epidermal growth fact 89.2 0.28 6E-06 41.0 2.2 29 253-282 52-81 (139)
105 KOG0598 Ribosomal protein S6 k 89.2 0.26 5.7E-06 48.7 2.4 35 398-432 25-60 (357)
106 KOG0032 Ca2+/calmodulin-depend 88.9 0.33 7.2E-06 49.4 3.1 30 403-432 40-70 (382)
107 KOG1027 Serine/threonine prote 88.9 0.13 2.8E-06 55.9 0.1 33 399-432 510-543 (903)
108 KOG0660 Mitogen-activated prot 88.8 0.27 5.8E-06 48.5 2.3 37 395-431 19-56 (359)
109 PF08693 SKG6: Transmembrane a 88.4 0.41 8.8E-06 31.7 2.2 22 325-346 12-33 (40)
110 KOG1163 Casein kinase (serine/ 88.3 0.44 9.6E-06 44.9 3.2 40 391-431 9-49 (341)
111 PF12947 EGF_3: EGF domain; I 88.2 0.25 5.5E-06 32.1 1.1 26 252-278 6-31 (36)
112 KOG0667 Dual-specificity tyros 87.0 0.66 1.4E-05 49.1 3.9 30 403-432 191-221 (586)
113 KOG0582 Ste20-like serine/thre 85.9 0.71 1.5E-05 47.0 3.4 42 403-444 31-74 (516)
114 KOG2345 Serine/threonine prote 85.2 0.41 8.9E-06 45.2 1.2 45 400-444 23-68 (302)
115 PF04478 Mid2: Mid2 like cell 85.0 0.47 1E-05 41.1 1.4 19 325-343 49-67 (154)
116 COG0661 AarF Predicted unusual 84.3 0.57 1.2E-05 49.4 2.0 37 398-435 126-162 (517)
117 PF12661 hEGF: Human growth fa 84.0 0.49 1.1E-05 23.4 0.6 13 269-281 1-13 (13)
118 cd00053 EGF Epidermal growth f 83.7 1.4 3E-05 27.3 3.0 26 253-279 7-32 (36)
119 PHA03390 pk1 serine/threonine- 83.5 1.1 2.3E-05 42.7 3.4 27 406-432 24-51 (267)
120 smart00179 EGF_CA Calcium-bind 83.3 1.4 2.9E-05 28.3 2.8 28 253-281 10-38 (39)
121 PF00954 S_locus_glycop: S-loc 83.0 1.7 3.7E-05 35.7 4.0 40 232-278 69-108 (110)
122 PF02009 Rifin_STEVOR: Rifin/s 82.4 0.62 1.3E-05 45.5 1.2 28 335-362 266-293 (299)
123 KOG0615 Serine/threonine prote 82.3 1.4 3E-05 44.6 3.6 30 403-432 177-207 (475)
124 PHA03207 serine/threonine kina 82.2 1.4 3.1E-05 44.6 3.9 34 399-432 93-129 (392)
125 PRK10359 lipopolysaccharide co 82.1 1.4 3.1E-05 41.5 3.5 35 397-432 30-64 (232)
126 KOG0578 p21-activated serine/t 81.8 1.2 2.6E-05 46.5 3.1 44 401-444 276-320 (550)
127 PF15102 TMEM154: TMEM154 prot 81.0 0.82 1.8E-05 39.4 1.3 7 388-394 125-131 (146)
128 PF07645 EGF_CA: Calcium-bindi 80.8 1.1 2.3E-05 30.0 1.6 25 252-277 10-34 (42)
129 KOG0583 Serine/threonine prote 80.4 1.9 4.1E-05 43.7 4.0 35 398-432 17-52 (370)
130 PF05454 DAG1: Dystroglycan (D 80.1 0.55 1.2E-05 45.6 0.0 40 328-367 151-190 (290)
131 KOG0585 Ca2+/calmodulin-depend 79.5 1.7 3.7E-05 44.8 3.2 39 394-432 93-132 (576)
132 PF14575 EphA2_TM: Ephrin type 79.3 0.14 3E-06 39.3 -3.5 16 387-402 56-71 (75)
133 KOG0579 Ste20-like serine/thre 79.0 0.4 8.7E-06 50.8 -1.4 42 404-445 38-80 (1187)
134 cd00054 EGF_CA Calcium-binding 79.0 2.4 5.1E-05 26.7 2.8 28 253-281 10-37 (38)
135 KOG1167 Serine/threonine prote 78.5 0.66 1.4E-05 46.7 0.0 37 398-434 36-76 (418)
136 PHA03210 serine/threonine kina 78.5 0.84 1.8E-05 48.2 0.8 24 397-420 147-170 (501)
137 KOG4279 Serine/threonine prote 78.5 1.7 3.7E-05 46.9 3.0 34 403-436 580-614 (1226)
138 KOG1164 Casein kinase (serine/ 78.2 1.9 4.2E-05 42.6 3.2 34 399-432 19-54 (322)
139 KOG1151 Tousled-like protein k 77.3 0.44 9.6E-06 48.4 -1.6 29 403-431 468-497 (775)
140 smart00181 EGF Epidermal growt 77.0 2.7 5.9E-05 26.3 2.6 27 253-281 7-34 (35)
141 KOG0596 Dual specificity; seri 76.8 0.87 1.9E-05 47.6 0.3 42 404-445 367-410 (677)
142 KOG1214 Nidogen and related ba 76.0 2.8 6E-05 45.7 3.7 40 252-304 791-832 (1289)
143 PF07974 EGF_2: EGF-like domai 75.9 2.9 6.2E-05 26.3 2.4 26 253-281 7-32 (32)
144 KOG0696 Serine/threonine prote 74.6 1.6 3.4E-05 44.2 1.4 44 388-432 340-384 (683)
145 KOG0587 Traf2- and Nck-interac 73.3 4.3 9.2E-05 44.9 4.4 46 388-433 9-55 (953)
146 PF08374 Protocadherin: Protoc 73.3 3.8 8.2E-05 37.6 3.4 24 325-348 38-61 (221)
147 KOG0592 3-phosphoinositide-dep 72.9 2 4.3E-05 44.9 1.7 37 395-431 70-107 (604)
148 KOG0616 cAMP-dependent protein 72.0 2.7 5.9E-05 40.8 2.3 38 388-432 41-79 (355)
149 KOG0664 Nemo-like MAPK-related 71.8 1.6 3.5E-05 41.8 0.7 29 403-431 58-87 (449)
150 COG2112 Predicted Ser/Thr prot 71.4 3.9 8.4E-05 37.0 3.0 33 402-435 26-58 (201)
151 PTZ00046 rifin; Provisional 71.2 1.8 3.9E-05 43.1 0.9 27 336-362 326-352 (358)
152 KOG1165 Casein kinase (serine/ 70.6 3.1 6.7E-05 41.1 2.4 33 398-430 28-61 (449)
153 KOG1219 Uncharacterized conser 70.0 4.9 0.00011 48.8 4.1 34 250-284 3907-3940(4289)
154 TIGR01477 RIFIN variant surfac 69.8 2 4.4E-05 42.6 0.9 26 337-362 322-347 (353)
155 PTZ00382 Variant-specific surf 69.1 5.6 0.00012 32.0 3.2 7 327-333 68-74 (96)
156 KOG0983 Mitogen-activated prot 67.5 5.9 0.00013 38.2 3.4 37 389-432 90-127 (391)
157 KOG0986 G protein-coupled rece 67.1 1.5 3.2E-05 45.0 -0.6 34 398-431 185-219 (591)
158 PF06697 DUF1191: Protein of u 66.1 9.7 0.00021 36.7 4.7 9 228-236 134-142 (278)
159 KOG4258 Insulin/growth factor 64.9 1 2.2E-05 49.2 -2.4 32 388-420 985-1016(1025)
160 KOG1345 Serine/threonine kinas 64.4 5.1 0.00011 38.6 2.4 56 388-444 12-70 (378)
161 KOG0612 Rho-associated, coiled 63.9 1.8 3.8E-05 49.1 -0.8 41 392-432 69-110 (1317)
162 KOG4289 Cadherin EGF LAG seven 63.3 5.7 0.00012 46.0 2.9 30 252-282 1245-1274(2531)
163 KOG0611 Predicted serine/threo 62.7 3.9 8.4E-05 41.4 1.4 29 404-432 59-88 (668)
164 KOG0576 Mitogen-activated prot 59.9 3.8 8.1E-05 44.1 0.8 33 400-432 17-50 (829)
165 PF08114 PMP1_2: ATPase proteo 59.6 18 0.0004 23.9 3.6 13 342-354 25-37 (43)
166 KOG0666 Cyclin C-dependent kin 58.7 2.9 6.2E-05 41.0 -0.3 29 404-432 30-63 (438)
167 KOG0607 MAP kinase-interacting 58.6 3.3 7.1E-05 40.7 0.1 39 389-432 74-113 (463)
168 KOG1235 Predicted unusual prot 58.4 7.3 0.00016 41.3 2.6 34 399-433 163-196 (538)
169 PF14670 FXa_inhibition: Coagu 57.1 5 0.00011 26.0 0.7 11 266-276 17-27 (36)
170 PF13095 FTA2: Kinetochore Sim 52.3 19 0.00041 33.3 3.9 41 384-430 28-69 (207)
171 KOG0671 LAMMER dual specificit 52.2 8.1 0.00018 38.8 1.6 48 386-435 79-127 (415)
172 KOG0690 Serine/threonine prote 51.5 7.4 0.00016 38.4 1.2 35 398-432 168-203 (516)
173 PHA02887 EGF-like protein; Pro 51.3 13 0.00028 30.8 2.4 30 253-283 93-123 (126)
174 KOG4289 Cadherin EGF LAG seven 50.2 23 0.00049 41.5 4.7 31 256-286 1726-1757(2531)
175 KOG0610 Putative serine/threon 47.4 9.8 0.00021 38.7 1.4 29 404-432 83-112 (459)
176 KOG0586 Serine/threonine prote 46.7 24 0.00052 37.6 4.1 40 393-432 51-91 (596)
177 PF15345 TMEM51: Transmembrane 45.6 31 0.00067 32.2 4.2 30 326-355 59-88 (233)
178 KOG4717 Serine/threonine prote 43.4 9.3 0.0002 40.0 0.5 29 404-432 24-53 (864)
179 PF12955 DUF3844: Domain of un 42.4 20 0.00043 29.2 2.2 33 242-278 7-43 (103)
180 KOG0669 Cyclin T-dependent kin 41.9 1.3 2.8E-05 42.1 -5.4 28 404-431 23-51 (376)
181 KOG1152 Signal transduction se 39.1 30 0.00065 37.0 3.4 32 400-431 563-595 (772)
182 PF08261 Carcinustatin: Carcin 38.7 14 0.00031 15.5 0.4 6 51-56 3-8 (8)
183 COG1862 YajC Preprotein transl 35.7 31 0.00068 27.8 2.3 8 410-417 56-63 (97)
184 PF14610 DUF4448: Protein of u 35.5 23 0.00049 32.2 1.7 10 204-213 85-94 (189)
185 PF09919 DUF2149: Uncharacteri 35.3 1.1E+02 0.0025 24.3 5.5 19 407-427 71-90 (92)
186 PF12259 DUF3609: Protein of u 34.9 29 0.00063 35.0 2.5 31 325-355 298-328 (361)
187 PF02480 Herpes_gE: Alphaherpe 33.6 14 0.0003 38.4 0.0 17 230-246 181-199 (439)
188 PF01102 Glycophorin_A: Glycop 32.8 16 0.00035 30.7 0.3 13 325-337 68-80 (122)
189 PRK01723 3-deoxy-D-manno-octul 32.1 56 0.0012 30.7 3.9 27 404-431 37-64 (239)
190 PF02699 YajC: Preprotein tran 31.6 49 0.0011 25.6 2.8 8 409-416 48-55 (82)
191 PF15099 PIRT: Phosphoinositid 31.5 21 0.00046 30.0 0.8 8 335-342 91-98 (129)
192 KOG0670 U4/U6-associated splic 31.0 34 0.00074 36.1 2.3 28 405-432 439-467 (752)
193 KOG1290 Serine/threonine prote 30.7 46 0.00099 34.8 3.1 33 400-432 80-113 (590)
194 PF12768 Rax2: Cortical protei 30.3 54 0.0012 31.9 3.5 21 325-345 229-249 (281)
195 KOG0668 Casein kinase II, alph 29.4 12 0.00027 35.2 -1.0 33 403-435 43-76 (338)
196 TIGR00739 yajC preprotein tran 28.4 43 0.00092 26.2 2.0 7 409-415 49-55 (84)
197 PF02009 Rifin_STEVOR: Rifin/s 28.3 36 0.00078 33.4 1.9 26 331-356 265-290 (299)
198 PHA03265 envelope glycoprotein 27.9 44 0.00095 33.2 2.3 9 85-93 76-84 (402)
199 COG0478 RIO-like serine/threon 27.8 59 0.0013 31.6 3.2 29 404-432 97-125 (304)
200 KOG0584 Serine/threonine prote 27.4 20 0.00043 38.3 -0.1 42 404-445 46-92 (632)
201 KOG0695 Serine/threonine prote 26.3 21 0.00046 35.3 -0.1 36 397-432 249-285 (593)
202 KOG3482 Small nuclear ribonucl 25.2 84 0.0018 23.6 2.8 16 404-419 20-35 (79)
203 PF07547 RSD-2: RSD-2 N-termin 24.4 1E+02 0.0022 24.2 3.3 38 408-445 30-77 (84)
204 PF04478 Mid2: Mid2 like cell 24.3 18 0.00038 31.6 -1.0 26 323-349 51-76 (154)
205 PRK05585 yajC preprotein trans 24.3 64 0.0014 26.4 2.4 8 409-416 64-71 (106)
206 PF12877 DUF3827: Domain of un 24.1 59 0.0013 35.0 2.6 10 230-239 205-214 (684)
207 PF12946 EGF_MSP1_1: MSP1 EGF 23.1 42 0.0009 21.9 0.8 24 253-276 6-29 (37)
208 PF13268 DUF4059: Protein of u 22.7 66 0.0014 24.2 1.9 14 340-353 22-35 (72)
209 PF03302 VSP: Giardia variant- 22.4 56 0.0012 33.5 2.1 15 325-339 367-381 (397)
210 PF05454 DAG1: Dystroglycan (D 22.1 30 0.00064 33.8 0.0 32 326-357 146-177 (290)
211 PF03229 Alpha_GJ: Alphavirus 21.7 89 0.0019 25.9 2.6 13 328-340 87-99 (126)
212 KOG1033 eIF-2alpha kinase PEK/ 21.1 26 0.00057 36.7 -0.6 36 397-432 48-84 (516)
213 PF04971 Lysis_S: Lysis protei 21.1 51 0.0011 24.6 1.1 11 327-337 35-45 (68)
No 1
>PF13947 GUB_WAK_bind: Wall-associated receptor kinase galacturonan-binding
Probab=99.94 E-value=8e-27 Score=193.46 Aligned_cols=104 Identities=41% Similarity=0.743 Sum_probs=90.0
Q ss_pred CCCCCCCCCCeeeccCCCCCCCCCCCCCCeEecCCCCCCCccccCCCceeEEeeccC-ceeEEeeeeccccccccCCc-c
Q 035536 38 KFLCPTECGNVSIIYPFGIGKGCYFDKGYEVICDNSSGSPKAFLPSIKTELLDSYSD-TTIRVNIPVIFLHNRIATRN-H 115 (445)
Q Consensus 38 ~~~C~~~CG~v~I~YPFgi~~~C~~~~~F~l~C~~~~~~p~l~l~~~~~~V~~I~~~-~~i~v~~~~~~~~C~~~~~~-~ 115 (445)
+++||++||||+||||||++++|+++|+|+|+|++++++|+|++.+++|+|++|+|+ ++|+|.+++++ .|+..... .
T Consensus 1 ~~~C~~~CGnv~IpYPFgi~~~C~~~~~F~L~C~~~~~~~~l~l~~~~~~V~~I~~~~~~i~v~~~~~~-~~~~~~~~~~ 79 (106)
T PF13947_consen 1 KPGCPSSCGNVSIPYPFGIGPGCGRDPGFELTCNNNTSPPKLLLSSGNYEVLSISYENGTIRVSDPISS-NCYSSSSSNS 79 (106)
T ss_pred CCCCCCccCCEeecCCCccCCCCCCCCCcEEECCCCCCCceeEecCCcEEEEEEecCCCEEEEEecccc-ceecCCCCcc
Confidence 579999999999999999999999999999999998778999998899999999999 99999999988 77733321 2
Q ss_pred ccceeeeCCcceeeccCCcEEEEEcccc
Q 035536 116 MAREVNLSGSAFTFPWRLNKFTAIGCDN 143 (445)
Q Consensus 116 ~~~~~~l~~~pf~~S~~~n~~~~~gC~~ 143 (445)
....|++.+ ||.+|+.+|.|+++||++
T Consensus 80 ~~~~~~~~~-~~~~s~~~N~~~~~GC~t 106 (106)
T PF13947_consen 80 SNSNLSLNG-PFFFSSSSNKFTVVGCNT 106 (106)
T ss_pred cccEEeecC-CceEccCCcEEEEECCCC
Confidence 234566666 899988899999999985
No 2
>PF08488 WAK: Wall-associated kinase; InterPro: IPR013695 This domain is found together with the eukaryotic protein kinase domain IPR000719 from INTERPRO in plant wall-associated kinases (WAKs) and related proteins. WAKs are serine-threonine kinases which might be involved in signalling to the cytoplasm and are required for cell expansion []. ; GO: 0004674 protein serine/threonine kinase activity, 0016021 integral to membrane
Probab=99.19 E-value=1e-10 Score=95.52 Aligned_cols=97 Identities=28% Similarity=0.510 Sum_probs=69.0
Q ss_pred CCCcCCCCC---CCCCC-CceEEEEEEEeecCC-CCCccceEEEeeCccccccCCCCccccccCCcccEEEEEEEeeccc
Q 035536 169 KSGCYDFLC---SIPPI-SKVLNANLSYFYSQS-ILQNCRSVSLVQGDWLDSSYLSNPQVLKERDQVPAMLEWGEKIGTC 243 (445)
Q Consensus 169 ~~~Csg~gC---~i~~~-~~~~~~~~~~~~~~~-~~~~C~~a~~~~~~~~~f~~~~~~~~~~~~~~~p~~L~W~i~~~~C 243 (445)
+++|+|++| +||.+ ++.+.+++...+... ...+|++|||+++.||.+...+ +..+....++||+|+|.|...+.
T Consensus 1 n~~CsG~~CCQt~iP~~~~qv~~~~i~~~~~~~~~~~~Ck~AFL~d~~~~~~n~t~-p~~~~~~~y~pv~L~W~i~t~~~ 79 (103)
T PF08488_consen 1 NSSCSGIGCCQTSIPSGLLQVFNVTIESTDGNNQTSNGCKVAFLVDEDWFSSNITD-PEDFHAMGYVPVVLDWFIDTSDS 79 (103)
T ss_pred CCccCCcceeccCCCCCCceEEEEEeEecCCCcccCCCceEEEEeccccccccCCC-hHHhccCCeeEEEEEEEEecCCc
Confidence 468999999 89987 578898887765422 4579999999999999865555 34566667899999999964322
Q ss_pred ccccCCCCcccCCCCccccCCCCCeeeecC
Q 035536 244 IEEYSSNPTSCNLNQECLMQLSSGYVCLCD 273 (445)
Q Consensus 244 ~~~~~~~~~~C~~ns~C~~~~~~g~~C~C~ 273 (445)
....+++|..+.. .. ...+|.|.
T Consensus 80 ---~~~~s~~C~~~~~--y~--~~~~C~C~ 102 (103)
T PF08488_consen 80 ---SFSNSLACKNNTE--YS--SSNRCSCS 102 (103)
T ss_pred ---CcCcCccCCCcee--cc--CCCcEeCC
Confidence 1224578885544 21 12278885
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.13 E-value=3.8e-11 Score=120.73 Aligned_cols=62 Identities=40% Similarity=0.748 Sum_probs=54.8
Q ss_pred cceeeechhhccccCCCCCceeeccCCCceEEEEEECCCCEEEEEEcccCCcccHhHhhhcC
Q 035536 384 KTKLFTSNDLEKATDNYNTNRILGQGGQGTVYKGMLTNGRIVAVKKSKLVDESNVEQFINEV 445 (445)
Q Consensus 384 ~~~~ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~~~~~~~eF~~Ev 445 (445)
..+.|+++||++||++|+++++||+|+||+||||.|+||+.||||++.....++.+||.+||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei 122 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEV 122 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHH
Confidence 57789999999999999999999999999999999999999999999764433156699986
No 4
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.02 E-value=7.8e-10 Score=116.33 Aligned_cols=55 Identities=29% Similarity=0.506 Sum_probs=39.9
Q ss_pred cceeeechhhccccCCCCCceeeccCCCceEEEEEE-CCC----CEEEEEEcccC-CcccHhHhhhcC
Q 035536 384 KTKLFTSNDLEKATDNYNTNRILGQGGQGTVYKGML-TNG----RIVAVKKSKLV-DESNVEQFINEV 445 (445)
Q Consensus 384 ~~~~ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg----~~VAVKkl~~~-~~~~~~eF~~Ev 445 (445)
..+++...|+++. ++||+|+||+||||.| ++| .+||||.+... ..+..+||+.|+
T Consensus 689 ~lrI~kEtelkk~-------kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeA 749 (1177)
T KOG1025|consen 689 LLRILKETELKKD-------KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEA 749 (1177)
T ss_pred heeechhhhhhhh-------ceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHH
Confidence 4455555555544 8999999999999998 665 47999999653 344567788763
No 5
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=98.67 E-value=5.8e-08 Score=97.05 Aligned_cols=37 Identities=38% Similarity=0.590 Sum_probs=30.2
Q ss_pred eeeccCCCceEEEEEECCCCEEEEEEcccCCcccHhHhhhc
Q 035536 404 RILGQGGQGTVYKGMLTNGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
++||+|+||.||||.| +++.||||++.. ++.+.|++|
T Consensus 216 eli~~Grfg~V~KaqL-~~~~VAVKifp~---~~kqs~~~E 252 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL-DNRLVAVKIFPE---QEKQSFQNE 252 (534)
T ss_pred HHhhcCccceeehhhc-cCceeEEEecCH---HHHHHHHhH
Confidence 7899999999999999 569999999954 344556665
No 6
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=98.30 E-value=2.4e-07 Score=97.62 Aligned_cols=59 Identities=27% Similarity=0.412 Sum_probs=47.9
Q ss_pred eeechhhccccCCCCC---------ceeeccCCCceEEEEEE----CCCCEEEEEEcccC-CcccHhHhhhcC
Q 035536 387 LFTSNDLEKATDNYNT---------NRILGQGGQGTVYKGML----TNGRIVAVKKSKLV-DESNVEQFINEV 445 (445)
Q Consensus 387 ~ft~~eL~~aT~~F~~---------~~~IG~G~fGtVYKG~L----~dg~~VAVKkl~~~-~~~~~~eF~~Ev 445 (445)
.+||||-.+|...|.. +++||.|.||+||+|.| +....||||.||.. .+++..+|+.|.
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EA 681 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEA 681 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhh
Confidence 4788888888877754 78999999999999999 22458999999985 456778999873
No 7
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=97.86 E-value=6.9e-06 Score=84.75 Aligned_cols=49 Identities=31% Similarity=0.445 Sum_probs=38.2
Q ss_pred eechhhccccCCCCCceeeccCCCceEEEEEECCCCEEEEEEcccC--CcccHhHhhhcC
Q 035536 388 FTSNDLEKATDNYNTNRILGQGGQGTVYKGMLTNGRIVAVKKSKLV--DESNVEQFINEV 445 (445)
Q Consensus 388 ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~--~~~~~~eF~~Ev 445 (445)
++++|++.+ ..||+|.||+||||.|-. .||||+|+.. +..+.++|.+||
T Consensus 389 Ip~~ev~l~-------~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEV 439 (678)
T KOG0193|consen 389 IPPEEVLLG-------ERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEV 439 (678)
T ss_pred cCHHHhhcc-------ceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHH
Confidence 444555544 789999999999999943 5999999764 445678999997
No 8
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=97.83 E-value=4.1e-05 Score=87.17 Aligned_cols=44 Identities=30% Similarity=0.451 Sum_probs=35.3
Q ss_pred eeechhhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccC
Q 035536 387 LFTSNDLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLV 433 (445)
Q Consensus 387 ~ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~ 433 (445)
.++++++.. .|.+.++||+|+||+||||.. .+|..||||+++..
T Consensus 682 ~~~~~~~~~---~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~ 726 (968)
T PLN00113 682 SITINDILS---SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDV 726 (968)
T ss_pred hhhHHHHHh---hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCC
Confidence 355566544 467778999999999999998 67899999999754
No 9
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.68 E-value=1.6e-05 Score=85.06 Aligned_cols=42 Identities=31% Similarity=0.378 Sum_probs=34.7
Q ss_pred eeeccCCCceEEEEEECC------CCEEEEEEcccCCcc-cHhHhhhcC
Q 035536 404 RILGQGGQGTVYKGMLTN------GRIVAVKKSKLVDES-NVEQFINEV 445 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L~d------g~~VAVKkl~~~~~~-~~~eF~~Ev 445 (445)
+.||+|+||.||+|.+.. .+.||||.||+.... ..+||.+|+
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REa 540 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREA 540 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHH
Confidence 679999999999999833 458999999986554 678898884
No 10
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=97.57 E-value=6.7e-05 Score=78.76 Aligned_cols=49 Identities=20% Similarity=0.470 Sum_probs=37.8
Q ss_pred ccCCCCCceeeccCCCceEEEEEE-----------------CCCCEEEEEEcccCCcccHhHhhhc
Q 035536 396 ATDNYNTNRILGQGGQGTVYKGML-----------------TNGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 396 aT~~F~~~~~IG~G~fGtVYKG~L-----------------~dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
..++|...++||+|+||+||||.+ .+++.||||+++.......++|++|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e 208 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKT 208 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhh
Confidence 467888889999999999999975 2457899999976554445566553
No 11
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.55 E-value=4.5e-05 Score=76.26 Aligned_cols=30 Identities=37% Similarity=0.522 Sum_probs=26.5
Q ss_pred ceeeccCCCceEEEEEECCCCEEEEEEcccC
Q 035536 403 NRILGQGGQGTVYKGMLTNGRIVAVKKSKLV 433 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~ 433 (445)
.+.||+|.||+|++|.| .|..||||.+...
T Consensus 216 ~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr 245 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR 245 (513)
T ss_pred EEEecCccccceeeccc-cCCceEEEEeccc
Confidence 37899999999999999 5889999999653
No 12
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.14 E-value=0.00018 Score=79.84 Aligned_cols=42 Identities=43% Similarity=0.727 Sum_probs=34.6
Q ss_pred ceeeccCCCceEEEEEECC--CC----EEEEEEcccC-CcccHhHhhhc
Q 035536 403 NRILGQGGQGTVYKGMLTN--GR----IVAVKKSKLV-DESNVEQFINE 444 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L~d--g~----~VAVKkl~~~-~~~~~~eF~~E 444 (445)
.+.||+|+||.||+|++.+ |. .||||+|+.. +.+++.+|++|
T Consensus 697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~E 745 (1025)
T KOG1095|consen 697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKE 745 (1025)
T ss_pred eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHH
Confidence 4889999999999999943 43 4999999764 56678899988
No 13
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=97.05 E-value=0.00099 Score=68.98 Aligned_cols=43 Identities=26% Similarity=0.291 Sum_probs=36.5
Q ss_pred ceeeccCCCceEEEEEECCCCEEEEEEcccCCccc-HhHhhhcC
Q 035536 403 NRILGQGGQGTVYKGMLTNGRIVAVKKSKLVDESN-VEQFINEV 445 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~~~~~-~~eF~~Ev 445 (445)
.+.||+|-||+|-.-++..+..||||+|+.....+ .++|.+||
T Consensus 543 ~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEI 586 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEI 586 (807)
T ss_pred hhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHH
Confidence 35699999999999999778999999999865544 58999885
No 14
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=96.96 E-value=0.00077 Score=69.55 Aligned_cols=42 Identities=38% Similarity=0.642 Sum_probs=33.6
Q ss_pred ceeeccCCCceEEEEEECC--C---CEEEEEEccc---CCcccHhHhhhc
Q 035536 403 NRILGQGGQGTVYKGMLTN--G---RIVAVKKSKL---VDESNVEQFINE 444 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L~d--g---~~VAVKkl~~---~~~~~~~eF~~E 444 (445)
.+.||+|+||+||+|.|.. + ..||||..+. ....+++||++|
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~E 211 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKE 211 (474)
T ss_pred cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHH
Confidence 3889999999999999933 3 2389999984 446678899988
No 15
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=96.80 E-value=0.0011 Score=70.11 Aligned_cols=53 Identities=26% Similarity=0.413 Sum_probs=40.8
Q ss_pred eeeechhhccccCCCCCceeeccCCCceEEEEEE--CCCC--EEEEEEcccCCcc-cHhHhhhcC
Q 035536 386 KLFTSNDLEKATDNYNTNRILGQGGQGTVYKGML--TNGR--IVAVKKSKLVDES-NVEQFINEV 445 (445)
Q Consensus 386 ~~ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L--~dg~--~VAVKkl~~~~~~-~~~eF~~Ev 445 (445)
..+..++|..- ++||+|.||.|.+|.| ++|. .||||.|+..... ..++|++|+
T Consensus 105 clIpee~i~l~-------e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEa 162 (1039)
T KOG0199|consen 105 CLIPEEQIKLY-------ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREA 162 (1039)
T ss_pred eeccHHHHHHH-------HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHH
Confidence 34566666554 7899999999999999 3454 6899999886554 568899985
No 16
>PHA02988 hypothetical protein; Provisional
Probab=96.69 E-value=0.002 Score=62.46 Aligned_cols=56 Identities=25% Similarity=0.474 Sum_probs=41.8
Q ss_pred cceeeechhhccccCCCCCceeeccCCCceEEEEEECCCCEEEEEEcccCCccc---HhHhhhcC
Q 035536 384 KTKLFTSNDLEKATDNYNTNRILGQGGQGTVYKGMLTNGRIVAVKKSKLVDESN---VEQFINEV 445 (445)
Q Consensus 384 ~~~~ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~~~~~---~~eF~~Ev 445 (445)
.++.++.+|++..+. ..||+|++|.||||.+ +|+.||||+++...... .+.|.+|+
T Consensus 11 ~~~~i~~~~i~~~~~-----~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~ 69 (283)
T PHA02988 11 DIKCIESDDIDKYTS-----VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEI 69 (283)
T ss_pred cceecCHHHcCCCCC-----eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHH
Confidence 456677888855433 7899999999999999 78999999997543322 45666764
No 17
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=96.66 E-value=0.0017 Score=63.77 Aligned_cols=33 Identities=33% Similarity=0.488 Sum_probs=27.6
Q ss_pred CCceeeccCCCceEEEEEE-CCCCEEEEEEcccC
Q 035536 401 NTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLV 433 (445)
Q Consensus 401 ~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~ 433 (445)
...++||.|.||.||+|++ +.+..|||||....
T Consensus 27 ~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d 60 (364)
T KOG0658|consen 27 EAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQD 60 (364)
T ss_pred EeeEEEeecccceEEEEEEcCCCceeEEEEecCC
Confidence 3348999999999999999 44689999998653
No 18
>PF14380 WAK_assoc: Wall-associated receptor kinase C-terminal
Probab=96.54 E-value=0.007 Score=48.67 Aligned_cols=70 Identities=19% Similarity=0.357 Sum_probs=47.1
Q ss_pred CCCccceEEEeeCccccccCCC-CccccccCCcccEEEEEEEeecccccccCCCCcccC-CCCcccc-CCCCCeeeecCC
Q 035536 198 ILQNCRSVSLVQGDWLDSSYLS-NPQVLKERDQVPAMLEWGEKIGTCIEEYSSNPTSCN-LNQECLM-QLSSGYVCLCDS 274 (445)
Q Consensus 198 ~~~~C~~a~~~~~~~~~f~~~~-~~~~~~~~~~~p~~L~W~i~~~~C~~~~~~~~~~C~-~ns~C~~-~~~~g~~C~C~~ 274 (445)
....|...+.|+.......... ....+.+....+|+|+|.+..+.|. .|. +++.|.+ .....+.|.|++
T Consensus 21 ~~~~C~~~v~vPV~~~~~~~~~~~~~~~~~~L~~GF~L~w~~~~~~C~--------~C~~SgG~Cgy~~~~~~f~C~C~d 92 (94)
T PF14380_consen 21 LAGSCQKSVVVPVLGSAVDSIDGSSGNYEEVLKKGFELEWNADSGDCR--------ECEASGGRCGYDSNSEQFTCFCSD 92 (94)
T ss_pred cCCcCCEEEEEEECchhhhccccchhHHHHHHhcCcEEEEeCCCCcCc--------ChhcCCCEeCCCCCCceEEEECCC
Confidence 3467998777665543221111 1224444456899999998666887 688 8899988 444578999998
Q ss_pred C
Q 035536 275 L 275 (445)
Q Consensus 275 g 275 (445)
|
T Consensus 93 g 93 (94)
T PF14380_consen 93 G 93 (94)
T ss_pred C
Confidence 7
No 19
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=96.53 E-value=0.0022 Score=64.61 Aligned_cols=42 Identities=38% Similarity=0.487 Sum_probs=31.9
Q ss_pred eeeccCCCceEEEEEECCCCEEEEEEcccCCcc--cHhHhhhcC
Q 035536 404 RILGQGGQGTVYKGMLTNGRIVAVKKSKLVDES--NVEQFINEV 445 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~~~~--~~~eF~~Ev 445 (445)
+.||+|+||+||||.+.....||||++...... ..++|.+|+
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~ 90 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREA 90 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHH
Confidence 669999999999999954444999999763322 256888875
No 20
>PRK09188 serine/threonine protein kinase; Provisional
Probab=96.42 E-value=0.003 Score=63.68 Aligned_cols=36 Identities=19% Similarity=0.298 Sum_probs=29.6
Q ss_pred ccCCCCCceeeccCCCceEEEEEEC--CCCEEEEEEcc
Q 035536 396 ATDNYNTNRILGQGGQGTVYKGMLT--NGRIVAVKKSK 431 (445)
Q Consensus 396 aT~~F~~~~~IG~G~fGtVYKG~L~--dg~~VAVKkl~ 431 (445)
.-++|...++||+|+||+||++... +++.||||++.
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~ 53 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRV 53 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEec
Confidence 3455777789999999999999874 57889999875
No 21
>PTZ00284 protein kinase; Provisional
Probab=96.41 E-value=0.0032 Score=65.77 Aligned_cols=45 Identities=22% Similarity=0.326 Sum_probs=37.2
Q ss_pred eechhhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 388 FTSNDLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 388 ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
+..+++...+++|...++||+|+||+||++.. ..++.||||+++.
T Consensus 119 ~~~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~ 164 (467)
T PTZ00284 119 VLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRN 164 (467)
T ss_pred ecCCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEec
Confidence 44456667788888889999999999999987 4578999999964
No 22
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=96.31 E-value=0.0053 Score=59.03 Aligned_cols=47 Identities=26% Similarity=0.381 Sum_probs=40.7
Q ss_pred eeeechhhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 386 KLFTSNDLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 386 ~~ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
+.+.++++..++++|...+.||+|+||+||++.. .+++.+|||.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~ 53 (286)
T cd06638 6 KTIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDP 53 (286)
T ss_pred ceEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecc
Confidence 3467788999999999889999999999999988 4578999998864
No 23
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=96.27 E-value=0.0046 Score=66.27 Aligned_cols=37 Identities=32% Similarity=0.502 Sum_probs=31.5
Q ss_pred ccCCCCCceeeccCCCceEEEEEECC-----CCEEEEEEccc
Q 035536 396 ATDNYNTNRILGQGGQGTVYKGMLTN-----GRIVAVKKSKL 432 (445)
Q Consensus 396 aT~~F~~~~~IG~G~fGtVYKG~L~d-----g~~VAVKkl~~ 432 (445)
..++|...++||+|+||+||+|++.+ +..||||+++.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~ 171 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE 171 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence 56677778999999999999999844 68999999864
No 24
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=96.19 E-value=0.0046 Score=65.21 Aligned_cols=53 Identities=26% Similarity=0.396 Sum_probs=38.3
Q ss_pred hhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccC--CcccHhHhhhc
Q 035536 392 DLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLV--DESNVEQFINE 444 (445)
Q Consensus 392 eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~--~~~~~~eF~~E 444 (445)
+.....++|...++||+|+||+||++.. .+|+.||||+++.. +..+...+.+|
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~E 81 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAE 81 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHH
Confidence 3444456777778999999999999976 57899999998542 23334455555
No 25
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=96.19 E-value=0.0038 Score=63.23 Aligned_cols=47 Identities=26% Similarity=0.315 Sum_probs=33.3
Q ss_pred CCCCceeeccCCCceEEEEEE------CCCCEEEEEEcccC-CcccHhHhhhcC
Q 035536 399 NYNTNRILGQGGQGTVYKGML------TNGRIVAVKKSKLV-DESNVEQFINEV 445 (445)
Q Consensus 399 ~F~~~~~IG~G~fGtVYKG~L------~dg~~VAVKkl~~~-~~~~~~eF~~Ev 445 (445)
+|...+.||+|+||+||+++. +.+..||||+++.. .....+.|++|+
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei 89 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSEL 89 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHH
Confidence 444458899999999999974 33568999999753 223345566663
No 26
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=96.15 E-value=0.0055 Score=59.19 Aligned_cols=46 Identities=28% Similarity=0.433 Sum_probs=41.0
Q ss_pred eeechhhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 387 LFTSNDLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 387 ~ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
+++.+++.+++++|...+.||+|+||.||++.. .++..+|||.+..
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~ 57 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDP 57 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecc
Confidence 477889999999999999999999999999988 5688999999864
No 27
>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms]
Probab=96.01 E-value=0.0099 Score=69.51 Aligned_cols=36 Identities=31% Similarity=0.636 Sum_probs=28.2
Q ss_pred CcccCCCCccccCCCCCeeeecCCCCCCCCCCCCcc
Q 035536 251 PTSCNLNQECLMQLSSGYVCLCDSLVDGRYCPGRLI 286 (445)
Q Consensus 251 ~~~C~~ns~C~~~~~~g~~C~C~~g~~g~~c~~~~~ 286 (445)
...|...+.|....+.||.|+|+.-|-|+.|.....
T Consensus 3869 ~npCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~~e 3904 (4289)
T KOG1219|consen 3869 DNPCQHGGTCISQPKGGYKCKCPSQYSGNHCEIDLE 3904 (4289)
T ss_pred cCcccCCCEecCCCCCceEEeCcccccCcccccccc
Confidence 346888889988666699999999999998865443
No 28
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=95.99 E-value=0.0024 Score=60.39 Aligned_cols=53 Identities=30% Similarity=0.460 Sum_probs=39.8
Q ss_pred ceeeechhhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccC-CcccHhHhhhc
Q 035536 385 TKLFTSNDLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLV-DESNVEQFINE 444 (445)
Q Consensus 385 ~~~ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~-~~~~~~eF~~E 444 (445)
...|+.++|+.- ..||.|.||+|+|-.. +.|+..|||+++.. ...+.++|+.|
T Consensus 58 ~~~F~~~~Lqdl-------g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e 112 (361)
T KOG1006|consen 58 LHTFTSDNLQDL-------GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLME 112 (361)
T ss_pred ccccccchHHHH-------HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHH
Confidence 445676666655 6799999999999877 67999999999764 33555666655
No 29
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=95.91 E-value=0.0058 Score=60.98 Aligned_cols=45 Identities=24% Similarity=0.293 Sum_probs=38.0
Q ss_pred eechhhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 388 FTSNDLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 388 ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
...++|..++++|...+.||+|+||.||++.. .+|..||||+++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~ 52 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR 52 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecC
Confidence 34567777888898889999999999999986 5688999999964
No 30
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=95.78 E-value=0.009 Score=61.19 Aligned_cols=48 Identities=33% Similarity=0.389 Sum_probs=33.7
Q ss_pred CCCCCceeeccCCCceEEEEEECC------CCEEEEEEcccCC-cccHhHhhhcC
Q 035536 398 DNYNTNRILGQGGQGTVYKGMLTN------GRIVAVKKSKLVD-ESNVEQFINEV 445 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L~d------g~~VAVKkl~~~~-~~~~~eF~~Ev 445 (445)
+.|...++||+|+||+||+|+... +..||||+++... ....+.|++|+
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei 91 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSEL 91 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHH
Confidence 344445889999999999998621 3469999997532 33345677764
No 31
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=95.75 E-value=0.0068 Score=62.11 Aligned_cols=46 Identities=28% Similarity=0.318 Sum_probs=32.6
Q ss_pred CCCceeeccCCCceEEEEEECC------CCEEEEEEcccCC-cccHhHhhhcC
Q 035536 400 YNTNRILGQGGQGTVYKGMLTN------GRIVAVKKSKLVD-ESNVEQFINEV 445 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L~d------g~~VAVKkl~~~~-~~~~~eF~~Ev 445 (445)
+...+.||+|+||.||+|.+.+ +..||||+++... ....++|++|+
T Consensus 39 ~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~ 91 (401)
T cd05107 39 LVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSEL 91 (401)
T ss_pred eehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHH
Confidence 3334889999999999999732 3589999997532 22344676663
No 32
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.73 E-value=0.0076 Score=60.57 Aligned_cols=30 Identities=33% Similarity=0.594 Sum_probs=25.5
Q ss_pred ceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 403 NRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
.++||+|.||.||||.- .-++.||||.+..
T Consensus 18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~L 48 (467)
T KOG0201|consen 18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDL 48 (467)
T ss_pred chhccccccceeeeeeeccccceEEEEEech
Confidence 36799999999999987 3477999999964
No 33
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=95.55 E-value=0.009 Score=60.50 Aligned_cols=47 Identities=30% Similarity=0.339 Sum_probs=32.7
Q ss_pred CCCCceeeccCCCceEEEEEE------CCCCEEEEEEcccCC-cccHhHhhhcC
Q 035536 399 NYNTNRILGQGGQGTVYKGML------TNGRIVAVKKSKLVD-ESNVEQFINEV 445 (445)
Q Consensus 399 ~F~~~~~IG~G~fGtVYKG~L------~dg~~VAVKkl~~~~-~~~~~eF~~Ev 445 (445)
+|...++||+|+||.||+++. .++..||||+++... ....+.|++|+
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~ 92 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSEL 92 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHH
Confidence 455558899999999999874 234589999997532 23344566653
No 34
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=95.51 E-value=0.0097 Score=59.54 Aligned_cols=42 Identities=31% Similarity=0.385 Sum_probs=31.5
Q ss_pred ceeeccCCCceEEEEEE-CCCCEEEEEEcccCC-cccHhHhhhc
Q 035536 403 NRILGQGGQGTVYKGML-TNGRIVAVKKSKLVD-ESNVEQFINE 444 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~-~~~~~eF~~E 444 (445)
.+.||+|+||+||+++. .+|+.||||.+.... ....++|.+|
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E 122 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICRE 122 (353)
T ss_pred hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHH
Confidence 37899999999999987 468999999996432 2223456665
No 35
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=95.44 E-value=0.0077 Score=61.69 Aligned_cols=53 Identities=30% Similarity=0.347 Sum_probs=40.5
Q ss_pred ceeeechhhccccCCCCCceeeccCCCceEEEEEECCCCEEEEEEcccCCcccHhHhhhcC
Q 035536 385 TKLFTSNDLEKATDNYNTNRILGQGGQGTVYKGMLTNGRIVAVKKSKLVDESNVEQFINEV 445 (445)
Q Consensus 385 ~~~ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~~~~~~~eF~~Ev 445 (445)
...+..++|... +.||+|-||+|+.|.+.....||||.++... ...++|++|+
T Consensus 200 ~wei~r~~l~l~-------~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea 252 (468)
T KOG0197|consen 200 PWEIPREELKLI-------RELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREA 252 (468)
T ss_pred CeeecHHHHHHH-------HHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHH
Confidence 334566666655 7899999999999999766799999998753 3456787763
No 36
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=95.44 E-value=0.015 Score=55.89 Aligned_cols=45 Identities=24% Similarity=0.482 Sum_probs=38.0
Q ss_pred eechhhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 388 FTSNDLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 388 ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
.++.++..+.+.|...+.||+|+||+||+|.. .+++.||+|.+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~ 51 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDV 51 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEec
Confidence 46677777888888888999999999999998 5678999998854
No 37
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.25 E-value=0.015 Score=54.26 Aligned_cols=34 Identities=35% Similarity=0.424 Sum_probs=28.0
Q ss_pred CCCCCceeeccCCCceEEEEEEC-CCCEEEEEEcc
Q 035536 398 DNYNTNRILGQGGQGTVYKGMLT-NGRIVAVKKSK 431 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L~-dg~~VAVKkl~ 431 (445)
++|.-.+.||+|.||.||.|..+ ++-.||+|.+.
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlf 56 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLF 56 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeee
Confidence 34555589999999999999984 46799999993
No 38
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=95.24 E-value=0.01 Score=62.19 Aligned_cols=45 Identities=36% Similarity=0.514 Sum_probs=37.1
Q ss_pred CCCCceeeccCCCceEEEEEECC-CCEEEEEEcccCCcccHhHhhhc
Q 035536 399 NYNTNRILGQGGQGTVYKGMLTN-GRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 399 ~F~~~~~IG~G~fGtVYKG~L~d-g~~VAVKkl~~~~~~~~~eF~~E 444 (445)
++...+.||-|-||.||-|+|.. ...||||.|++. ..+.+||+.|
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkE 313 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKE 313 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHH
Confidence 45556889999999999999954 568999999874 4468899887
No 39
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=95.22 E-value=0.012 Score=60.44 Aligned_cols=43 Identities=42% Similarity=0.548 Sum_probs=33.1
Q ss_pred ceeeccCCCceEEEEEE-CCCCEEEEEEcccC--CcccHhHhhhcC
Q 035536 403 NRILGQGGQGTVYKGML-TNGRIVAVKKSKLV--DESNVEQFINEV 445 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~--~~~~~~eF~~Ev 445 (445)
+++||.|-||+||-|+- ..|+.||||.+... ...+.++..+||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EV 614 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEV 614 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHH
Confidence 37899999999999988 56999999998542 334456666664
No 40
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=95.21 E-value=0.013 Score=59.14 Aligned_cols=39 Identities=15% Similarity=0.299 Sum_probs=31.4
Q ss_pred ccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 394 EKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 394 ~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
....++|...++||+|+||+||++.. .++..||||+++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~ 78 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSK 78 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence 33455666668999999999999988 4588999999853
No 41
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=95.20 E-value=0.018 Score=57.23 Aligned_cols=35 Identities=29% Similarity=0.327 Sum_probs=28.9
Q ss_pred CCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 398 DNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
+.|...+.||+|+||+||++.. .++..||||+++.
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~ 50 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSR 50 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCc
Confidence 4455567899999999999986 5678999999864
No 42
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=95.17 E-value=0.017 Score=57.28 Aligned_cols=46 Identities=24% Similarity=0.319 Sum_probs=33.0
Q ss_pred CCCCceeeccCCCceEEEEEEC-CCCEEEEEEcccC---CcccHhHhhhc
Q 035536 399 NYNTNRILGQGGQGTVYKGMLT-NGRIVAVKKSKLV---DESNVEQFINE 444 (445)
Q Consensus 399 ~F~~~~~IG~G~fGtVYKG~L~-dg~~VAVKkl~~~---~~~~~~eF~~E 444 (445)
+|...+.||+|+||+||++... +|+.||||.++.. .....+++.+|
T Consensus 19 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E 68 (329)
T PTZ00263 19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQE 68 (329)
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHH
Confidence 3444588999999999999984 5889999998642 22233455555
No 43
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=95.04 E-value=0.027 Score=54.83 Aligned_cols=46 Identities=37% Similarity=0.590 Sum_probs=34.6
Q ss_pred CCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccCCcccHhHhhhc
Q 035536 399 NYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 399 ~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
.|...+.||+|+||+||++.. .+++.||||.+........+.|.+|
T Consensus 20 ~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e 66 (297)
T cd06656 20 KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINE 66 (297)
T ss_pred hceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHH
Confidence 355558899999999999986 5789999999975444444555554
No 44
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=94.97 E-value=0.021 Score=52.18 Aligned_cols=30 Identities=30% Similarity=0.482 Sum_probs=26.8
Q ss_pred ceeeccCCCceEEEEEECCCCEEEEEEccc
Q 035536 403 NRILGQGGQGTVYKGMLTNGRIVAVKKSKL 432 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~ 432 (445)
.+.||+|+||.||++..++|+.||||+.+.
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~ 49 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRL 49 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEec
Confidence 377999999999999998899999998653
No 45
>PTZ00036 glycogen synthase kinase; Provisional
Probab=94.96 E-value=0.029 Score=58.25 Aligned_cols=37 Identities=30% Similarity=0.532 Sum_probs=30.7
Q ss_pred ccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 396 ATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 396 aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
....|...++||+|+||+||+|.. ..++.||||++..
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~ 101 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQ 101 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEec
Confidence 345677778999999999999988 4588999999854
No 46
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=94.92 E-value=0.016 Score=60.72 Aligned_cols=46 Identities=39% Similarity=0.639 Sum_probs=35.2
Q ss_pred CCCCceeeccCCCceEEEEEECC---C--CEEEEEEcccC-CcccHhHhhhc
Q 035536 399 NYNTNRILGQGGQGTVYKGMLTN---G--RIVAVKKSKLV-DESNVEQFINE 444 (445)
Q Consensus 399 ~F~~~~~IG~G~fGtVYKG~L~d---g--~~VAVKkl~~~-~~~~~~eF~~E 444 (445)
....+++||+|-||.||+|++.+ | ..||||..|.. +....+.|++|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqE 441 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQE 441 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHH
Confidence 34456889999999999999933 2 46999999874 44456778887
No 47
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=94.86 E-value=0.021 Score=57.75 Aligned_cols=43 Identities=21% Similarity=0.339 Sum_probs=35.0
Q ss_pred chhhccccCCCCCceeeccCCCceEEEEEEC-CCCEEEEEEccc
Q 035536 390 SNDLEKATDNYNTNRILGQGGQGTVYKGMLT-NGRIVAVKKSKL 432 (445)
Q Consensus 390 ~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L~-dg~~VAVKkl~~ 432 (445)
..++....++|...+.||+|+||+||++... +++.||+|.++.
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~ 78 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK 78 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEH
Confidence 4456666677887899999999999999884 578999999853
No 48
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=94.81 E-value=0.023 Score=57.40 Aligned_cols=41 Identities=20% Similarity=0.357 Sum_probs=32.3
Q ss_pred hhccccCCCCCceeeccCCCceEEEEEEC-CCCEEEEEEccc
Q 035536 392 DLEKATDNYNTNRILGQGGQGTVYKGMLT-NGRIVAVKKSKL 432 (445)
Q Consensus 392 eL~~aT~~F~~~~~IG~G~fGtVYKG~L~-dg~~VAVKkl~~ 432 (445)
++....++|...++||+|+||.||++... +++.||+|.++.
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~ 78 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSK 78 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEH
Confidence 34444566776789999999999999984 578999999853
No 49
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=94.69 E-value=0.031 Score=53.81 Aligned_cols=50 Identities=36% Similarity=0.556 Sum_probs=38.1
Q ss_pred ccccCCCCCceeeccCCCceEEEEEEC-CCCEEEEEEcccCCcccHhHhhhc
Q 035536 394 EKATDNYNTNRILGQGGQGTVYKGMLT-NGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 394 ~~aT~~F~~~~~IG~G~fGtVYKG~L~-dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
...++.|...+.||+|++|.||+|... ++..||||+++.... ..++|.+|
T Consensus 15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e 65 (286)
T cd06614 15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINE 65 (286)
T ss_pred CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHH
Confidence 345666777788999999999999995 688999999975433 34455555
No 50
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=94.68 E-value=0.036 Score=55.27 Aligned_cols=36 Identities=33% Similarity=0.459 Sum_probs=30.1
Q ss_pred cCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 397 TDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 397 T~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
.+.|...+.||+|+||+||++.. .+|..||||+++.
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~ 50 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYR 50 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecc
Confidence 45566668899999999999986 5689999999854
No 51
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=94.66 E-value=0.035 Score=54.14 Aligned_cols=45 Identities=27% Similarity=0.433 Sum_probs=33.3
Q ss_pred CCCceeeccCCCceEEEEEEC-CCCEEEEEEcccCC---cccHhHhhhc
Q 035536 400 YNTNRILGQGGQGTVYKGMLT-NGRIVAVKKSKLVD---ESNVEQFINE 444 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L~-dg~~VAVKkl~~~~---~~~~~eF~~E 444 (445)
|...+.||+|+||+||+|... +|+.||||++.... ....++|.+|
T Consensus 17 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~E 65 (307)
T cd06607 17 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKE 65 (307)
T ss_pred hhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHH
Confidence 556688999999999999984 68899999985422 2233456655
No 52
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=94.59 E-value=0.034 Score=55.66 Aligned_cols=47 Identities=28% Similarity=0.361 Sum_probs=33.7
Q ss_pred CCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccC--CcccHhHhhhc
Q 035536 398 DNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLV--DESNVEQFINE 444 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~--~~~~~~eF~~E 444 (445)
+.|...+.||+|+||+||++.- ..|..||||+++.. .....+++.+|
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E 70 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRE 70 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHH
Confidence 4455568899999999999986 45889999999642 22233445554
No 53
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=94.58 E-value=0.04 Score=53.49 Aligned_cols=47 Identities=36% Similarity=0.581 Sum_probs=34.6
Q ss_pred CCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccCCcccHhHhhhc
Q 035536 398 DNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
+.|...+.||+|+||+||+|.. .++..||||.++.......+.|.+|
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e 66 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINE 66 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHH
Confidence 3455557899999999999986 4678999999865444444556655
No 54
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=94.44 E-value=0.037 Score=53.76 Aligned_cols=41 Identities=34% Similarity=0.541 Sum_probs=31.9
Q ss_pred eeeccCCCceEEEEEE-CCCCEEEEEEcccCCcccHhHhhhc
Q 035536 404 RILGQGGQGTVYKGML-TNGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
..||+|+||.||++.. .+|..||||++........+.|.+|
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e 67 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNE 67 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHH
Confidence 5699999999999988 5688999999865444444556665
No 55
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=94.39 E-value=0.063 Score=53.87 Aligned_cols=36 Identities=31% Similarity=0.357 Sum_probs=29.6
Q ss_pred cCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 397 TDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 397 T~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
.++|...+.||+|+||.||++.- ..++.||||+++.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~ 59 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR 59 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCc
Confidence 35566668899999999999986 4578999999964
No 56
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.35 E-value=0.018 Score=58.93 Aligned_cols=35 Identities=34% Similarity=0.600 Sum_probs=28.5
Q ss_pred CCCceeeccCCCceEEEEEE-CCCCEEEEEEcccCC
Q 035536 400 YNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLVD 434 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~ 434 (445)
|..-..||+|.||.|||++- ..|..||+||++...
T Consensus 119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~ 154 (560)
T KOG0600|consen 119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDN 154 (560)
T ss_pred HHHHHHhcCcchhheeEeeecccCcEEEEEEeeccc
Confidence 33346799999999999964 679999999997643
No 57
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=94.30 E-value=0.054 Score=52.63 Aligned_cols=45 Identities=38% Similarity=0.607 Sum_probs=33.4
Q ss_pred CCCceeeccCCCceEEEEEE-CCCCEEEEEEcccCCcccHhHhhhc
Q 035536 400 YNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
|...+.||+|+||+||+|+. .+++.||||.+........+.|.+|
T Consensus 22 y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e 67 (296)
T cd06654 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 67 (296)
T ss_pred eeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHH
Confidence 44447899999999999986 5688999999975444444555554
No 58
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=94.29 E-value=0.035 Score=57.53 Aligned_cols=36 Identities=22% Similarity=0.259 Sum_probs=30.5
Q ss_pred CCCCCceeeccCCCceEEEEEECCCCEEEEEEcccCC
Q 035536 398 DNYNTNRILGQGGQGTVYKGMLTNGRIVAVKKSKLVD 434 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~~ 434 (445)
..|++ +-||.|++|.||+|+|.+|+.||||..+...
T Consensus 118 ~~fd~-~plasaSigQVh~A~l~~G~~VaVKv~rp~i 153 (437)
T TIGR01982 118 AEFEE-KPLAAASIAQVHRARLVDGKEVAVKVLRPGI 153 (437)
T ss_pred hhCCC-cceeeeehhheEEEEecCCCEEEEEeeCCCc
Confidence 34554 5799999999999999999999999987643
No 59
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=94.28 E-value=0.03 Score=54.69 Aligned_cols=33 Identities=27% Similarity=0.472 Sum_probs=27.5
Q ss_pred CCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 400 YNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
|..-+.|++|.||.||+|.- .++++||.||++.
T Consensus 78 fe~lnrI~EGtyGiVYRakdk~t~eIVALKr~km 111 (419)
T KOG0663|consen 78 FEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKM 111 (419)
T ss_pred HHHHhhcccCcceeEEEeccCCcceeEEeeeccc
Confidence 33348899999999999986 4578999999976
No 60
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=94.25 E-value=0.038 Score=53.75 Aligned_cols=41 Identities=34% Similarity=0.421 Sum_probs=31.8
Q ss_pred eeeccCCCceEEEEEE-CCCCEEEEEEcccCCcccHhHhhhc
Q 035536 404 RILGQGGQGTVYKGML-TNGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
..||+|+||.||++.. .+++.||||.++.......+.+.+|
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e 68 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNE 68 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHH
Confidence 5699999999999987 4689999999965444445556665
No 61
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=94.24 E-value=0.042 Score=54.20 Aligned_cols=51 Identities=35% Similarity=0.436 Sum_probs=38.3
Q ss_pred eeechhhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccCC-cccHhHhhhc
Q 035536 387 LFTSNDLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLVD-ESNVEQFINE 444 (445)
Q Consensus 387 ~ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~-~~~~~eF~~E 444 (445)
.++..||++. ++||+|..|+|||... +.++..|+|.+.... ..-.+|.++|
T Consensus 75 ~i~~~dle~~-------~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rE 127 (364)
T KOG0581|consen 75 GISLSDLERL-------GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRE 127 (364)
T ss_pred ccCHHHhhhh-------hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHH
Confidence 3667788776 8899999999999998 568899999995432 2234555555
No 62
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=94.24 E-value=0.048 Score=53.01 Aligned_cols=45 Identities=36% Similarity=0.584 Sum_probs=34.0
Q ss_pred CCCceeeccCCCceEEEEEE-CCCCEEEEEEcccCCcccHhHhhhc
Q 035536 400 YNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
|...+.||.|++|+||+|+- .+|+.||||.+........+.+.+|
T Consensus 21 y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e 66 (296)
T cd06655 21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINE 66 (296)
T ss_pred EEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHH
Confidence 44447899999999999985 5789999999965444445556555
No 63
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=94.21 E-value=0.039 Score=56.92 Aligned_cols=40 Identities=25% Similarity=0.384 Sum_probs=32.9
Q ss_pred ccccCCCCCceeeccCCCceEEEEEECC-CCEEEEEEcccC
Q 035536 394 EKATDNYNTNRILGQGGQGTVYKGMLTN-GRIVAVKKSKLV 433 (445)
Q Consensus 394 ~~aT~~F~~~~~IG~G~fGtVYKG~L~d-g~~VAVKkl~~~ 433 (445)
....++|..-.+||+|+||.||.+.-.+ |...|+|+|+..
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS 177 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKS 177 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHH
Confidence 3456777777899999999999998744 889999999753
No 64
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=94.19 E-value=0.06 Score=51.92 Aligned_cols=42 Identities=36% Similarity=0.436 Sum_probs=32.5
Q ss_pred ceeeccCCCceEEEEEE-CCCCEEEEEEcccCCcccHhHhhhc
Q 035536 403 NRILGQGGQGTVYKGML-TNGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
-+.||+|++|.||++.. .+++.||||+++.......+.+.+|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e 66 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNE 66 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHH
Confidence 37899999999999986 5688999999865444444556655
No 65
>PF12662 cEGF: Complement Clr-like EGF-like
Probab=94.16 E-value=0.048 Score=31.93 Aligned_cols=21 Identities=24% Similarity=0.596 Sum_probs=16.0
Q ss_pred CeeeecCCCCCCCCCCCCccccCCC--CCCCCCCC
Q 035536 267 GYVCLCDSLVDGRYCPGRLICNTSN--GYNCSGCP 299 (445)
Q Consensus 267 g~~C~C~~g~~g~~c~~~~~C~~~~--~~~C~di~ 299 (445)
+|+|.|++| +... +..|.||+
T Consensus 1 sy~C~C~~G------------y~l~~d~~~C~DId 23 (24)
T PF12662_consen 1 SYTCSCPPG------------YQLSPDGRSCEDID 23 (24)
T ss_pred CEEeeCCCC------------CcCCCCCCccccCC
Confidence 589999999 5533 34898887
No 66
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=94.11 E-value=0.057 Score=52.31 Aligned_cols=34 Identities=29% Similarity=0.489 Sum_probs=28.5
Q ss_pred CCCCceeeccCCCceEEEEEECC-CCEEEEEEccc
Q 035536 399 NYNTNRILGQGGQGTVYKGMLTN-GRIVAVKKSKL 432 (445)
Q Consensus 399 ~F~~~~~IG~G~fGtVYKG~L~d-g~~VAVKkl~~ 432 (445)
+|...+.||+|+||+||+|...+ ++.||||+++.
T Consensus 16 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~ 50 (296)
T cd06618 16 DLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRR 50 (296)
T ss_pred hheeeeEeeccCCeEEEEEEECCCCeEEEEEEEec
Confidence 34444889999999999999965 88999999964
No 67
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=94.07 E-value=0.048 Score=53.55 Aligned_cols=33 Identities=30% Similarity=0.483 Sum_probs=28.0
Q ss_pred CCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 400 YNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
|...+.||+|+||+||++.. .++..||||++..
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~ 60 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSY 60 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEec
Confidence 55568899999999999997 4688999999864
No 68
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=93.98 E-value=0.054 Score=54.13 Aligned_cols=36 Identities=31% Similarity=0.371 Sum_probs=29.3
Q ss_pred cCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 397 TDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 397 T~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
.++|...+.||+|+||.||++.- ..++.||||+++.
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~ 52 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR 52 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCC
Confidence 34566668899999999999976 3578999999964
No 69
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=93.96 E-value=0.044 Score=54.72 Aligned_cols=46 Identities=28% Similarity=0.387 Sum_probs=31.6
Q ss_pred CCCCceeeccCCCceEEEEEECC--CCEEEEEEcccC---CcccHhHhhhc
Q 035536 399 NYNTNRILGQGGQGTVYKGMLTN--GRIVAVKKSKLV---DESNVEQFINE 444 (445)
Q Consensus 399 ~F~~~~~IG~G~fGtVYKG~L~d--g~~VAVKkl~~~---~~~~~~eF~~E 444 (445)
+|...+.||+|+||+||+|...+ +..||||++... .....++|.+|
T Consensus 31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E 81 (340)
T PTZ00426 31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSE 81 (340)
T ss_pred hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHH
Confidence 34445889999999999998743 368999998532 22234455555
No 70
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=93.95 E-value=0.04 Score=53.46 Aligned_cols=41 Identities=34% Similarity=0.447 Sum_probs=31.9
Q ss_pred eeeccCCCceEEEEEE-CCCCEEEEEEcccCCcccHhHhhhc
Q 035536 404 RILGQGGQGTVYKGML-TNGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
..||+|+||.||++.. .++..||||+++.......+.|.+|
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e 69 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNE 69 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHH
Confidence 5699999999999987 4688999999865444445556665
No 71
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=93.81 E-value=0.044 Score=53.43 Aligned_cols=48 Identities=29% Similarity=0.339 Sum_probs=33.6
Q ss_pred CCCCCceeeccCCCceEEEEEE------CCCCEEEEEEcccCC-cccHhHhhhcC
Q 035536 398 DNYNTNRILGQGGQGTVYKGML------TNGRIVAVKKSKLVD-ESNVEQFINEV 445 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L------~dg~~VAVKkl~~~~-~~~~~eF~~Ev 445 (445)
++|...+.||+|+||.||++.. ..+..||||+++... ....+.|.+|+
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~ 89 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSEL 89 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHH
Confidence 4566668999999999999975 234579999987532 23345566663
No 72
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=93.78 E-value=0.065 Score=53.32 Aligned_cols=37 Identities=35% Similarity=0.482 Sum_probs=30.7
Q ss_pred ccCCCCCceeeccCCCceEEEEEEC-CCCEEEEEEccc
Q 035536 396 ATDNYNTNRILGQGGQGTVYKGMLT-NGRIVAVKKSKL 432 (445)
Q Consensus 396 aT~~F~~~~~IG~G~fGtVYKG~L~-dg~~VAVKkl~~ 432 (445)
..++|...+.||+|++|+||+|... ++..||||+++.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~ 50 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSR 50 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccc
Confidence 3556666788999999999999984 578999999864
No 73
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=93.76 E-value=0.073 Score=52.94 Aligned_cols=35 Identities=29% Similarity=0.487 Sum_probs=29.3
Q ss_pred CCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 398 DNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
+.|...+.||+|+||+||+|+. .+|..||||+++.
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~ 50 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSR 50 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecC
Confidence 4555568899999999999986 5689999999864
No 74
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=93.62 E-value=0.073 Score=55.72 Aligned_cols=46 Identities=33% Similarity=0.541 Sum_probs=34.0
Q ss_pred CCCceeeccCCCceEEEEEE-CCCCEEEEEEccc---CCcccHhHhhhcC
Q 035536 400 YNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL---VDESNVEQFINEV 445 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~---~~~~~~~eF~~Ev 445 (445)
+...++||+|||.++|+++- ..|..||||++.. ....+.+...+||
T Consensus 20 Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EI 69 (592)
T KOG0575|consen 20 YKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEI 69 (592)
T ss_pred eeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHH
Confidence 45568999999999999987 7899999999843 1223344455553
No 75
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=93.38 E-value=0.085 Score=52.68 Aligned_cols=36 Identities=31% Similarity=0.433 Sum_probs=29.8
Q ss_pred cCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 397 TDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 397 T~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
.+.|...+.||+|+||+||++.- .+|+.||||+++.
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~ 51 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSR 51 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCc
Confidence 34566668899999999999987 4689999999853
No 76
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=93.32 E-value=0.062 Score=52.26 Aligned_cols=45 Identities=27% Similarity=0.307 Sum_probs=31.1
Q ss_pred CCCceeeccCCCceEEEEEE--------CCCCEEEEEEcccC-CcccHhHhhhc
Q 035536 400 YNTNRILGQGGQGTVYKGML--------TNGRIVAVKKSKLV-DESNVEQFINE 444 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L--------~dg~~VAVKkl~~~-~~~~~~eF~~E 444 (445)
|...+.||+|+||.||++.. .++..||||.++.. ...+.+++.+|
T Consensus 17 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E 70 (304)
T cd05101 17 LTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 70 (304)
T ss_pred eeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHH
Confidence 34447899999999999975 23457999999643 22334556555
No 77
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.16 E-value=0.11 Score=55.20 Aligned_cols=38 Identities=26% Similarity=0.334 Sum_probs=31.8
Q ss_pred ccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccC
Q 035536 396 ATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLV 433 (445)
Q Consensus 396 aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~ 433 (445)
..++|.--.+||+|.||.|+.+.+ .+++..|||.|+..
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~ 404 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKG 404 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeecc
Confidence 445677779999999999999999 45778999999763
No 78
>smart00090 RIO RIO-like kinase.
Probab=93.03 E-value=0.079 Score=50.20 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=27.6
Q ss_pred CCceeeccCCCceEEEEE--ECCCCEEEEEEccc
Q 035536 401 NTNRILGQGGQGTVYKGM--LTNGRIVAVKKSKL 432 (445)
Q Consensus 401 ~~~~~IG~G~fGtVYKG~--L~dg~~VAVKkl~~ 432 (445)
.-.+.||+|+||.||+|+ ..+|+.||||.++.
T Consensus 31 ~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~ 64 (237)
T smart00090 31 AIGGCISTGKEANVYHALDFDGSGKERAVKIYRT 64 (237)
T ss_pred HhCCeeccCcceeEEEEEecCCCCcEEEEEEEEc
Confidence 334779999999999998 67899999999864
No 79
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=92.94 E-value=0.022 Score=54.40 Aligned_cols=42 Identities=33% Similarity=0.649 Sum_probs=32.4
Q ss_pred eeeccCCCceEEEEE-ECCCCEEEEEEccc--CCcccHhHhhhcC
Q 035536 404 RILGQGGQGTVYKGM-LTNGRIVAVKKSKL--VDESNVEQFINEV 445 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~-L~dg~~VAVKkl~~--~~~~~~~eF~~Ev 445 (445)
+.||+|.||+|||.. +.+|..||.|+++- .+.+..++.+.||
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei 69 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEI 69 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHH
Confidence 679999999999995 58999999999963 3444455555553
No 80
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=92.84 E-value=0.028 Score=47.32 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=29.4
Q ss_pred CCCCceeeccCCCceEEEEEECCCCEEEEEEcccCC
Q 035536 399 NYNTNRILGQGGQGTVYKGMLTNGRIVAVKKSKLVD 434 (445)
Q Consensus 399 ~F~~~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~~ 434 (445)
.|++ +-|+.|..|.||+|+|.+|+.||||..+...
T Consensus 13 ~fd~-~PlasASiaQVh~a~l~~g~~VaVKV~rP~i 47 (119)
T PF03109_consen 13 EFDP-EPLASASIAQVHRARLKDGEEVAVKVQRPGI 47 (119)
T ss_pred HCCc-chhhheehhhheeeeecccchhhhhhcchHH
Confidence 3443 5689999999999999999999999987643
No 81
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=92.63 E-value=0.033 Score=55.49 Aligned_cols=47 Identities=23% Similarity=0.374 Sum_probs=34.1
Q ss_pred CCCCCceeeccCCCceEEEEEECC------CCEEEEEEccc-CCcccHhHhhhc
Q 035536 398 DNYNTNRILGQGGQGTVYKGMLTN------GRIVAVKKSKL-VDESNVEQFINE 444 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L~d------g~~VAVKkl~~-~~~~~~~eF~~E 444 (445)
..|..+.++-+|.||.||+|+|.+ .+.|-||.++. .++-+..-|++|
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~e 337 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQE 337 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHH
Confidence 446666778999999999998843 34678888865 455566666665
No 82
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=92.61 E-value=0.015 Score=55.81 Aligned_cols=44 Identities=27% Similarity=0.577 Sum_probs=32.5
Q ss_pred CCCceeeccCCCceEEEEEE-CCCCEEEEEEcccCCcccHhHhhhcC
Q 035536 400 YNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLVDESNVEQFINEV 445 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~~~~~~eF~~Ev 445 (445)
|+....||+|.||.|||++- ..|++||||++-.. .+.+|.++||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEI 79 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEI 79 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHH
Confidence 44446699999999999987 56999999998543 2345555553
No 83
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=92.59 E-value=0.079 Score=51.78 Aligned_cols=33 Identities=33% Similarity=0.520 Sum_probs=27.3
Q ss_pred CCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 400 YNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
|+..+.||+|+||+||+|.. .++..||||++..
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~ 50 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSY 50 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEec
Confidence 44457899999999999997 4578999999853
No 84
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=92.49 E-value=0.14 Score=50.13 Aligned_cols=30 Identities=33% Similarity=0.449 Sum_probs=25.7
Q ss_pred ceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 403 NRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
.+.||+|+||+||+|+. .+|..||||++..
T Consensus 26 ~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~ 56 (313)
T cd06633 26 LHEIGHGSFGAVYFATNSHTNEVVAVKKMSY 56 (313)
T ss_pred ceeeccCCCeEEEEEEECCCCcEEEEEEEec
Confidence 36799999999999987 4588999999864
No 85
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=92.44 E-value=0.04 Score=58.59 Aligned_cols=29 Identities=45% Similarity=0.694 Sum_probs=26.0
Q ss_pred eeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 404 RILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
+.||+||||.||+|+- ..|+.||||..+.
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~ 48 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNK 48 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhh
Confidence 6799999999999994 5699999999865
No 86
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=92.40 E-value=0.1 Score=50.83 Aligned_cols=46 Identities=28% Similarity=0.269 Sum_probs=31.4
Q ss_pred CCCCceeeccCCCceEEEEEEC--------CCCEEEEEEcccC-CcccHhHhhhc
Q 035536 399 NYNTNRILGQGGQGTVYKGMLT--------NGRIVAVKKSKLV-DESNVEQFINE 444 (445)
Q Consensus 399 ~F~~~~~IG~G~fGtVYKG~L~--------dg~~VAVKkl~~~-~~~~~~eF~~E 444 (445)
.|...+.||+|+||.||++... ++..||||.++.. ...+.+++.+|
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e 73 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISE 73 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHH
Confidence 3444478999999999999752 2357999999753 22334456555
No 87
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=92.19 E-value=0.11 Score=55.13 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=30.3
Q ss_pred CCCCCceeeccCCCceEEEEEECC-CCEEEEEEcccC
Q 035536 398 DNYNTNRILGQGGQGTVYKGMLTN-GRIVAVKKSKLV 433 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L~d-g~~VAVKkl~~~ 433 (445)
..|++ +-||.|++|.||++++.+ |+.||||.++..
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~ 155 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD 155 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence 45666 679999999999999988 999999999754
No 88
>PHA03212 serine/threonine kinase US3; Provisional
Probab=92.16 E-value=0.17 Score=51.63 Aligned_cols=35 Identities=11% Similarity=0.225 Sum_probs=29.1
Q ss_pred CCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 398 DNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
++|...+.||+|+||.||++.- ..++.||||+.+.
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~ 127 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR 127 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh
Confidence 4577778999999999999987 4578999998753
No 89
>PHA03209 serine/threonine kinase US3; Provisional
Probab=92.11 E-value=0.21 Score=50.09 Aligned_cols=36 Identities=19% Similarity=0.283 Sum_probs=29.1
Q ss_pred cCCCCCceeeccCCCceEEEEEEC-CCCEEEEEEccc
Q 035536 397 TDNYNTNRILGQGGQGTVYKGMLT-NGRIVAVKKSKL 432 (445)
Q Consensus 397 T~~F~~~~~IG~G~fGtVYKG~L~-dg~~VAVKkl~~ 432 (445)
..+|...+.||+|+||.||+|... .+..||||....
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~ 101 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK 101 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc
Confidence 345777789999999999999984 467899997643
No 90
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=92.09 E-value=0.15 Score=57.65 Aligned_cols=50 Identities=20% Similarity=0.270 Sum_probs=35.7
Q ss_pred ccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccC--CcccHhHhhhcC
Q 035536 396 ATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLV--DESNVEQFINEV 445 (445)
Q Consensus 396 aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~--~~~~~~eF~~Ev 445 (445)
..+.|...+.||+|+||+||++.. ..+..||+|.++.. .....+.|+.|+
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI 63 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEV 63 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHH
Confidence 345566668899999999999987 44678999988642 233345666653
No 91
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=92.08 E-value=0.048 Score=56.83 Aligned_cols=45 Identities=31% Similarity=0.511 Sum_probs=34.5
Q ss_pred eeeechhhccccCCCCCceeeccCCCceEEEEEECCCCEEEEEEcccCCcccH
Q 035536 386 KLFTSNDLEKATDNYNTNRILGQGGQGTVYKGMLTNGRIVAVKKSKLVDESNV 438 (445)
Q Consensus 386 ~~ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~~~~~~ 438 (445)
..+.+++|.+. +-||.|+.|.||.|.| .++.|||||+++..+.++
T Consensus 119 WeiPFe~IsEL-------eWlGSGaQGAVF~Grl-~netVAVKKV~elkETdI 163 (904)
T KOG4721|consen 119 WEIPFEEISEL-------EWLGSGAQGAVFLGRL-HNETVAVKKVRELKETDI 163 (904)
T ss_pred ccCCHHHhhhh-------hhhccCcccceeeeec-cCceehhHHHhhhhhhhH
Confidence 34666766554 7799999999999999 578899999976444333
No 92
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=92.03 E-value=0.14 Score=55.57 Aligned_cols=43 Identities=26% Similarity=0.446 Sum_probs=36.0
Q ss_pred ceeeccCCCceEEEEEECCC-CEEEEEEcccCCcccHhHhhhcC
Q 035536 403 NRILGQGGQGTVYKGMLTNG-RIVAVKKSKLVDESNVEQFINEV 445 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L~dg-~~VAVKkl~~~~~~~~~eF~~Ev 445 (445)
+++|-+|||+.||-+....+ ..+|+||+-..++...+...+||
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI 85 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREI 85 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHH
Confidence 48899999999999999666 99999999777776667666664
No 93
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.91 E-value=0.087 Score=55.20 Aligned_cols=43 Identities=35% Similarity=0.509 Sum_probs=32.5
Q ss_pred eechhhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccC
Q 035536 388 FTSNDLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLV 433 (445)
Q Consensus 388 ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~ 433 (445)
|.-+|-++. |.+-+.||.|.||.||-+.- .+..+|||||+.-.
T Consensus 19 F~k~DPEkl---f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsyS 62 (948)
T KOG0577|consen 19 FFKDDPEKL---FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS 62 (948)
T ss_pred HccCCHHHH---HHHHHHhcCCccceeEEeeccCccceeeeeecccc
Confidence 444555544 55568899999999999875 45779999999643
No 94
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=91.69 E-value=0.16 Score=50.12 Aligned_cols=31 Identities=35% Similarity=0.648 Sum_probs=27.1
Q ss_pred ceeeccCCCceEEEEEECC-CCEEEEEEcccC
Q 035536 403 NRILGQGGQGTVYKGMLTN-GRIVAVKKSKLV 433 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L~d-g~~VAVKkl~~~ 433 (445)
.+.||+|.||+||.+...+ |...|||.+...
T Consensus 22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~ 53 (313)
T KOG0198|consen 22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELE 53 (313)
T ss_pred hccccCccceEEEEEEecCCCcceeeeeeecc
Confidence 3889999999999999954 899999998654
No 95
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=91.65 E-value=0.16 Score=55.09 Aligned_cols=49 Identities=31% Similarity=0.392 Sum_probs=34.7
Q ss_pred cCCCCCceeeccCCCceEEEEEEC----C----CCEEEEEEcccC-CcccHhHhhhcC
Q 035536 397 TDNYNTNRILGQGGQGTVYKGMLT----N----GRIVAVKKSKLV-DESNVEQFINEV 445 (445)
Q Consensus 397 T~~F~~~~~IG~G~fGtVYKG~L~----d----g~~VAVKkl~~~-~~~~~~eF~~Ev 445 (445)
.+++.-.+.||+|.||.|+||.+. . ...||||+++.. ...+.++|..|+
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El 352 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSEL 352 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHH
Confidence 333333358999999999999972 1 357999999863 445566777663
No 96
>PF12191 stn_TNFRSF12A: Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain; InterPro: IPR022316 The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins. Family members are defined based on similarity in their extracellular domain - a region that contains many cysteine residues arranged in a specific repetitive pattern []. The cysteines allow formation of an extended rod-like structure, responsible for ligand binding []. Upon receptor activation, different intracellular signalling complexes are assembled for different members of the TNFR superfamily, depending on their intracellular domains and sequences []. Activation of TNFRs can therefore induce a range of disparate effects, including cell proliferation, differentiation, survival, or apoptotic cell death, depending upon the receptor involved []. TNFRs are widely distributed and play important roles in many crucial biological processes, such as lymphoid and neuronal development, innate and adaptive immunity, and maintenance of cellular homeostasis []. Drugs that manipulate their signalling have potential roles in the prevention and treatment of many diseases, such as viral infections, coronary heart disease, transplant rejection, and immune disease []. TNF receptor 12 (also known as TWEAK receptor, and fibroblast growth factor-inducible-14 (Fn14)) has been implicated in endothelial cell growth and migration []. The receptor may also play a role in cell-matrix interactions [].; PDB: 2KN0_A 2RPJ_A 2KMZ_A 2EQP_A.
Probab=91.45 E-value=0.031 Score=46.41 Aligned_cols=13 Identities=15% Similarity=0.473 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhh
Q 035536 340 LIGIWWLYKFVKR 352 (445)
Q Consensus 340 l~~~~~~~~~~~~ 352 (445)
+++.++++++.||
T Consensus 94 llsg~lv~rrcrr 106 (129)
T PF12191_consen 94 LLSGFLVWRRCRR 106 (129)
T ss_dssp -------------
T ss_pred HHHHHHHHhhhhc
Confidence 3334444444333
No 97
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=91.43 E-value=0.055 Score=60.93 Aligned_cols=37 Identities=35% Similarity=0.521 Sum_probs=30.4
Q ss_pred cCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccC
Q 035536 397 TDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLV 433 (445)
Q Consensus 397 T~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~ 433 (445)
.++|.+-.+||+||||.|||.+= =||+.-||||+...
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~ 515 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLK 515 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCc
Confidence 35566678999999999999964 38999999999653
No 98
>PHA03211 serine/threonine kinase US3; Provisional
Probab=90.98 E-value=0.26 Score=51.50 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=28.0
Q ss_pred CCCCCceeeccCCCceEEEEEECC-CCEEEEEEcc
Q 035536 398 DNYNTNRILGQGGQGTVYKGMLTN-GRIVAVKKSK 431 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L~d-g~~VAVKkl~ 431 (445)
.+|...+.||+|+||.||++..++ ++.||||+..
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~ 203 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW 203 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc
Confidence 356666889999999999999854 7889999753
No 99
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....
Probab=90.61 E-value=0.14 Score=32.26 Aligned_cols=27 Identities=26% Similarity=0.682 Sum_probs=22.1
Q ss_pred ccCCCCccccCCCCCeeeecCCCCCCC
Q 035536 253 SCNLNQECLMQLSSGYVCLCDSLVDGR 279 (445)
Q Consensus 253 ~C~~ns~C~~~~~~g~~C~C~~g~~g~ 279 (445)
.|..+++|.+....+|.|.|+.||.|+
T Consensus 5 ~C~n~g~C~~~~~~~y~C~C~~G~~G~ 31 (32)
T PF00008_consen 5 PCQNGGTCIDLPGGGYTCECPPGYTGK 31 (32)
T ss_dssp SSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred cCCCCeEEEeCCCCCEEeECCCCCccC
Confidence 688899999833568999999997764
No 100
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=90.34 E-value=0.32 Score=51.85 Aligned_cols=41 Identities=17% Similarity=0.282 Sum_probs=27.8
Q ss_pred eechhhccccCCCCCceeeccCCCceEEEEEECCCCEEEEEE
Q 035536 388 FTSNDLEKATDNYNTNRILGQGGQGTVYKGMLTNGRIVAVKK 429 (445)
Q Consensus 388 ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L~dg~~VAVKk 429 (445)
.+++.....+..+...++||+|+||+||+|.+.+.. +++|+
T Consensus 323 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~ 363 (535)
T PRK09605 323 VTWIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKE 363 (535)
T ss_pred eeeccccccccccCccceeccCCcEEEEEEeecCcc-ceeEE
Confidence 344444444555566789999999999999985544 44443
No 101
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=90.25 E-value=0.2 Score=56.16 Aligned_cols=41 Identities=29% Similarity=0.592 Sum_probs=33.6
Q ss_pred hhccccCCCCCceeeccCCCceEEEEEECCCCEEEEEEccc
Q 035536 392 DLEKATDNYNTNRILGQGGQGTVYKGMLTNGRIVAVKKSKL 432 (445)
Q Consensus 392 eL~~aT~~F~~~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~ 432 (445)
+++..-..|..+++||+|+||+||+|+=.+|+.||+|.=+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P 732 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKP 732 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecC
Confidence 44444456777799999999999999998999999998654
No 102
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=90.13 E-value=0.28 Score=45.14 Aligned_cols=57 Identities=23% Similarity=0.360 Sum_probs=36.9
Q ss_pred eechhhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccC-CcccHhHhhhc
Q 035536 388 FTSNDLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLV-DESNVEQFINE 444 (445)
Q Consensus 388 ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~-~~~~~~eF~~E 444 (445)
+..+.++...+.+..-..||+|++|.|=|-.+ .+|...|||+++.. +.++.+..+.|
T Consensus 36 I~~~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~d 94 (282)
T KOG0984|consen 36 IGDRNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMD 94 (282)
T ss_pred EecCccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHh
Confidence 33333444444444447799999998877766 68999999999752 33334444444
No 103
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=89.32 E-value=0.36 Score=50.65 Aligned_cols=45 Identities=18% Similarity=0.187 Sum_probs=31.4
Q ss_pred CCCceeeccCCCceEEEEEEC-C-CCEEEEEEcccCCcccHhHhhhc
Q 035536 400 YNTNRILGQGGQGTVYKGMLT-N-GRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L~-d-g~~VAVKkl~~~~~~~~~eF~~E 444 (445)
|...++||+|+||.||++.-. + ++.||+|++..........+.+|
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E 115 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSE 115 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHH
Confidence 344588999999999999763 3 57889998755444444455555
No 104
>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional
Probab=89.20 E-value=0.28 Score=40.97 Aligned_cols=29 Identities=24% Similarity=0.593 Sum_probs=21.9
Q ss_pred ccCCCCcccc-CCCCCeeeecCCCCCCCCCC
Q 035536 253 SCNLNQECLM-QLSSGYVCLCDSLVDGRYCP 282 (445)
Q Consensus 253 ~C~~ns~C~~-~~~~g~~C~C~~g~~g~~c~ 282 (445)
.|..+ .|.. .+-..+.|.|..||.|.-|.
T Consensus 52 YClHG-~C~yI~dl~~~~CrC~~GYtGeRCE 81 (139)
T PHA03099 52 YCLHG-DCIHARDIDGMYCRCSHGYTGIRCQ 81 (139)
T ss_pred EeECC-EEEeeccCCCceeECCCCccccccc
Confidence 56543 7887 65567899999998887664
No 105
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=89.16 E-value=0.26 Score=48.70 Aligned_cols=35 Identities=29% Similarity=0.546 Sum_probs=28.7
Q ss_pred CCCCCceeeccCCCceEEEEEEC-CCCEEEEEEccc
Q 035536 398 DNYNTNRILGQGGQGTVYKGMLT-NGRIVAVKKSKL 432 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L~-dg~~VAVKkl~~ 432 (445)
++|..-++||+|+||.||...-. .++..|+|.|+.
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K 60 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKK 60 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhh
Confidence 45666699999999999988774 478899999954
No 106
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=88.93 E-value=0.33 Score=49.37 Aligned_cols=30 Identities=37% Similarity=0.413 Sum_probs=26.4
Q ss_pred ceeeccCCCceEEEEEECC-CCEEEEEEccc
Q 035536 403 NRILGQGGQGTVYKGMLTN-GRIVAVKKSKL 432 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L~d-g~~VAVKkl~~ 432 (445)
.++||+|.||.||+.+-.. |..+|+|.++.
T Consensus 40 ~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k 70 (382)
T KOG0032|consen 40 GRELGRGQFGVVYLCREKSTGKEVACKVIPK 70 (382)
T ss_pred hhhhCCCCceEEEEEEecCCCceeEEEEeeh
Confidence 3789999999999999865 89999999954
No 107
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=88.87 E-value=0.13 Score=55.91 Aligned_cols=33 Identities=39% Similarity=0.691 Sum_probs=28.1
Q ss_pred CCCCceeeccCCCc-eEEEEEECCCCEEEEEEccc
Q 035536 399 NYNTNRILGQGGQG-TVYKGMLTNGRIVAVKKSKL 432 (445)
Q Consensus 399 ~F~~~~~IG~G~fG-tVYKG~L~dg~~VAVKkl~~ 432 (445)
-|..++++|.|.-| .||+|++ +||.|||||+-.
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~ 543 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLE 543 (903)
T ss_pred eeccHHHcccCCCCcEEEEEee-CCceehHHHHhh
Confidence 46778899999998 5799999 789999999843
No 108
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=88.84 E-value=0.27 Score=48.52 Aligned_cols=37 Identities=27% Similarity=0.323 Sum_probs=29.4
Q ss_pred cccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcc
Q 035536 395 KATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSK 431 (445)
Q Consensus 395 ~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~ 431 (445)
.+...+..-+.||+|++|.|.+++- .+|..|||||+.
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~ 56 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKIL 56 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhh
Confidence 3344454457799999999999987 568999999995
No 109
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=88.41 E-value=0.41 Score=31.71 Aligned_cols=22 Identities=14% Similarity=0.424 Sum_probs=10.8
Q ss_pred EEEEeecchhhhHHHHHHHHHH
Q 035536 325 YIVIGCSGGLVLLFLLIGIWWL 346 (445)
Q Consensus 325 ~iii~i~~~~~~~ill~~~~~~ 346 (445)
.+..++++.+++++++++++++
T Consensus 12 aIa~~VvVPV~vI~~vl~~~l~ 33 (40)
T PF08693_consen 12 AIAVGVVVPVGVIIIVLGAFLF 33 (40)
T ss_pred EEEEEEEechHHHHHHHHHHhh
Confidence 4445555555555444444444
No 110
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=88.26 E-value=0.44 Score=44.86 Aligned_cols=40 Identities=33% Similarity=0.547 Sum_probs=29.8
Q ss_pred hhhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcc
Q 035536 391 NDLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSK 431 (445)
Q Consensus 391 ~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~ 431 (445)
+++..+. .+...+.||.|.||.+|.|.- .+|..||||.=+
T Consensus 9 ~~~iv~g-ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es 49 (341)
T KOG1163|consen 9 EELIVGG-KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLES 49 (341)
T ss_pred hhheecc-ceEEEEeecCCchhheeeeeeccCCceEEEEeec
Confidence 3444332 244457899999999999975 889999999754
No 111
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins.; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.
Probab=88.19 E-value=0.25 Score=32.06 Aligned_cols=26 Identities=27% Similarity=0.664 Sum_probs=18.1
Q ss_pred cccCCCCccccCCCCCeeeecCCCCCC
Q 035536 252 TSCNLNQECLMQLSSGYVCLCDSLVDG 278 (445)
Q Consensus 252 ~~C~~ns~C~~~~~~g~~C~C~~g~~g 278 (445)
..|..|+.|.+..+ .|.|.|++||.|
T Consensus 6 ~~C~~nA~C~~~~~-~~~C~C~~Gy~G 31 (36)
T PF12947_consen 6 GGCHPNATCTNTGG-SYTCTCKPGYEG 31 (36)
T ss_dssp GGS-TTCEEEE-TT-SEEEEE-CEEEC
T ss_pred CCCCCCcEeecCCC-CEEeECCCCCcc
Confidence 46889999998444 899999999433
No 112
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=86.96 E-value=0.66 Score=49.10 Aligned_cols=30 Identities=40% Similarity=0.505 Sum_probs=25.9
Q ss_pred ceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 403 NRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
.++||+|.||.|-|+.- ..++.||||.+|.
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN 221 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKN 221 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeecc
Confidence 37899999999999976 4488999999975
No 113
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=85.92 E-value=0.71 Score=47.05 Aligned_cols=42 Identities=21% Similarity=0.435 Sum_probs=31.3
Q ss_pred ceeeccCCCceEEEEEE-CCCCEEEEEEcccCC-cccHhHhhhc
Q 035536 403 NRILGQGGQGTVYKGML-TNGRIVAVKKSKLVD-ESNVEQFINE 444 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~-~~~~~eF~~E 444 (445)
..+||.|.-++||+|.- +.+..||||++.... ..+.++..+|
T Consensus 31 ~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE 74 (516)
T KOG0582|consen 31 QEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKE 74 (516)
T ss_pred EEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHH
Confidence 37899999999999976 778999999996432 2224555554
No 114
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=85.20 E-value=0.41 Score=45.19 Aligned_cols=45 Identities=31% Similarity=0.491 Sum_probs=34.5
Q ss_pred CCCceeeccCCCceEEEEE-ECCCCEEEEEEcccCCcccHhHhhhc
Q 035536 400 YNTNRILGQGGQGTVYKGM-LTNGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~-L~dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
|.-.+.||+|||.-||.+. +.+++..|+||+.....++.++-++|
T Consensus 23 yri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rE 68 (302)
T KOG2345|consen 23 YRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALRE 68 (302)
T ss_pred EEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHH
Confidence 3334789999999999886 57788999999977665555555555
No 115
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region. The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].
Probab=84.96 E-value=0.47 Score=41.13 Aligned_cols=19 Identities=37% Similarity=0.239 Sum_probs=9.9
Q ss_pred EEEEeecchhhhHHHHHHH
Q 035536 325 YIVIGCSGGLVLLFLLIGI 343 (445)
Q Consensus 325 ~iii~i~~~~~~~ill~~~ 343 (445)
-+++++++++++.++++++
T Consensus 49 nIVIGvVVGVGg~ill~il 67 (154)
T PF04478_consen 49 NIVIGVVVGVGGPILLGIL 67 (154)
T ss_pred cEEEEEEecccHHHHHHHH
Confidence 4566666666554444333
No 116
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=84.26 E-value=0.57 Score=49.45 Aligned_cols=37 Identities=19% Similarity=0.256 Sum_probs=30.4
Q ss_pred CCCCCceeeccCCCceEEEEEECCCCEEEEEEcccCCc
Q 035536 398 DNYNTNRILGQGGQGTVYKGMLTNGRIVAVKKSKLVDE 435 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~~~ 435 (445)
..|++ +=|+.++-|.||+|+|.+|+.||||..+..-+
T Consensus 126 ~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~ 162 (517)
T COG0661 126 SEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIR 162 (517)
T ss_pred HHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChH
Confidence 34553 45889999999999999999999999987543
No 117
>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A.
Probab=83.95 E-value=0.49 Score=23.43 Aligned_cols=13 Identities=31% Similarity=0.767 Sum_probs=9.4
Q ss_pred eeecCCCCCCCCC
Q 035536 269 VCLCDSLVDGRYC 281 (445)
Q Consensus 269 ~C~C~~g~~g~~c 281 (445)
.|.|++||.|..|
T Consensus 1 ~C~C~~G~~G~~C 13 (13)
T PF12661_consen 1 TCQCPPGWTGPNC 13 (13)
T ss_dssp EEEE-TTEETTTT
T ss_pred CccCcCCCcCCCC
Confidence 4899999888655
No 118
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.
Probab=83.69 E-value=1.4 Score=27.35 Aligned_cols=26 Identities=23% Similarity=0.639 Sum_probs=20.5
Q ss_pred ccCCCCccccCCCCCeeeecCCCCCCC
Q 035536 253 SCNLNQECLMQLSSGYVCLCDSLVDGR 279 (445)
Q Consensus 253 ~C~~ns~C~~~~~~g~~C~C~~g~~g~ 279 (445)
.|..++.|.+.. .+|.|.|+.||.|.
T Consensus 7 ~C~~~~~C~~~~-~~~~C~C~~g~~g~ 32 (36)
T cd00053 7 PCSNGGTCVNTP-GSYRCVCPPGYTGD 32 (36)
T ss_pred CCCCCCEEecCC-CCeEeECCCCCccc
Confidence 577788898743 47999999998775
No 119
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=83.55 E-value=1.1 Score=42.69 Aligned_cols=27 Identities=22% Similarity=0.091 Sum_probs=23.2
Q ss_pred eccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 406 LGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 406 IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
||+|+||.||++.- .++..+|+|.++.
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~ 51 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKA 51 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEeh
Confidence 69999999999987 5678899999854
No 120
>smart00179 EGF_CA Calcium-binding EGF-like domain.
Probab=83.30 E-value=1.4 Score=28.33 Aligned_cols=28 Identities=29% Similarity=0.764 Sum_probs=20.9
Q ss_pred ccCCCCccccCCCCCeeeecCCCCC-CCCC
Q 035536 253 SCNLNQECLMQLSSGYVCLCDSLVD-GRYC 281 (445)
Q Consensus 253 ~C~~ns~C~~~~~~g~~C~C~~g~~-g~~c 281 (445)
.|..++.|.+..+ +|.|.|..||. |..|
T Consensus 10 ~C~~~~~C~~~~g-~~~C~C~~g~~~g~~C 38 (39)
T smart00179 10 PCQNGGTCVNTVG-SYRCECPPGYTDGRNC 38 (39)
T ss_pred CcCCCCEeECCCC-CeEeECCCCCccCCcC
Confidence 5777778887443 79999999976 6554
No 121
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation. This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen
Probab=83.04 E-value=1.7 Score=35.70 Aligned_cols=40 Identities=18% Similarity=0.270 Sum_probs=29.0
Q ss_pred EEEEEEEeecccccccCCCCcccCCCCccccCCCCCeeeecCCCCCC
Q 035536 232 AMLEWGEKIGTCIEEYSSNPTSCNLNQECLMQLSSGYVCLCDSLVDG 278 (445)
Q Consensus 232 ~~L~W~i~~~~C~~~~~~~~~~C~~ns~C~~~~~~g~~C~C~~g~~g 278 (445)
=.+.|..+.+.|+.- ..|..++.|... ....|.|.+||.+
T Consensus 69 W~~~~~~p~d~Cd~y-----~~CG~~g~C~~~--~~~~C~Cl~GF~P 108 (110)
T PF00954_consen 69 WSVFWSAPKDQCDVY-----GFCGPNGICNSN--NSPKCSCLPGFEP 108 (110)
T ss_pred EEEEEEecccCCCCc-----cccCCccEeCCC--CCCceECCCCcCC
Confidence 356777877789853 369999999542 2456999999654
No 122
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=82.40 E-value=0.62 Score=45.50 Aligned_cols=28 Identities=25% Similarity=0.516 Sum_probs=11.8
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 035536 335 VLLFLLIGIWWLYKFVKRKRQIKLKQKF 362 (445)
Q Consensus 335 ~~~ill~~~~~~~~~~~~~k~~~~~~~~ 362 (445)
++++++++++.+++|+||+|+.+++.++
T Consensus 266 liIVLIMvIIYLILRYRRKKKmkKKlQY 293 (299)
T PF02009_consen 266 LIIVLIMVIIYLILRYRRKKKMKKKLQY 293 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 3333333333344444444444444443
No 123
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=82.25 E-value=1.4 Score=44.60 Aligned_cols=30 Identities=30% Similarity=0.392 Sum_probs=26.0
Q ss_pred ceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 403 NRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
.+.||+|+||.|-+|.= ..|+.||||.+..
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~k 207 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINK 207 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeeh
Confidence 57899999999999976 5689999999843
No 124
>PHA03207 serine/threonine kinase US3; Provisional
Probab=82.19 E-value=1.4 Score=44.63 Aligned_cols=34 Identities=26% Similarity=0.298 Sum_probs=26.7
Q ss_pred CCCCceeeccCCCceEEEEEEC---CCCEEEEEEccc
Q 035536 399 NYNTNRILGQGGQGTVYKGMLT---NGRIVAVKKSKL 432 (445)
Q Consensus 399 ~F~~~~~IG~G~fGtVYKG~L~---dg~~VAVKkl~~ 432 (445)
.|...+.||+|+||+||++... .+..||||.+..
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~ 129 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTG 129 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccc
Confidence 3555578999999999999763 356899999864
No 125
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=82.09 E-value=1.4 Score=41.49 Aligned_cols=35 Identities=11% Similarity=-0.122 Sum_probs=28.8
Q ss_pred cCCCCCceeeccCCCceEEEEEECCCCEEEEEEccc
Q 035536 397 TDNYNTNRILGQGGQGTVYKGMLTNGRIVAVKKSKL 432 (445)
Q Consensus 397 T~~F~~~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~ 432 (445)
.+.+...++||.|+||.||.... ++..+|||.++.
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~ 64 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAP 64 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEech
Confidence 35667779999999999998655 577899999965
No 126
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=81.78 E-value=1.2 Score=46.50 Aligned_cols=44 Identities=30% Similarity=0.459 Sum_probs=31.8
Q ss_pred CCceeeccCCCceEEEEEE-CCCCEEEEEEcccCCcccHhHhhhc
Q 035536 401 NTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 401 ~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
..-..||+|+.|.||-+.= ..++.||||++....+...+-.++|
T Consensus 276 ~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnE 320 (550)
T KOG0578|consen 276 TDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNE 320 (550)
T ss_pred cchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHH
Confidence 3346799999999998854 6788999999976444444444555
No 127
>PF15102 TMEM154: TMEM154 protein family
Probab=81.02 E-value=0.82 Score=39.41 Aligned_cols=7 Identities=14% Similarity=0.468 Sum_probs=3.0
Q ss_pred eechhhc
Q 035536 388 FTSNDLE 394 (445)
Q Consensus 388 ft~~eL~ 394 (445)
+..+||.
T Consensus 125 iEmeeld 131 (146)
T PF15102_consen 125 IEMEELD 131 (146)
T ss_pred hhHHHHH
Confidence 3444444
No 128
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins. Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....
Probab=80.83 E-value=1.1 Score=30.05 Aligned_cols=25 Identities=24% Similarity=0.598 Sum_probs=20.4
Q ss_pred cccCCCCccccCCCCCeeeecCCCCC
Q 035536 252 TSCNLNQECLMQLSSGYVCLCDSLVD 277 (445)
Q Consensus 252 ~~C~~ns~C~~~~~~g~~C~C~~g~~ 277 (445)
..|..++.|.+..+ +|.|.|++||.
T Consensus 10 ~~C~~~~~C~N~~G-sy~C~C~~Gy~ 34 (42)
T PF07645_consen 10 HNCPENGTCVNTEG-SYSCSCPPGYE 34 (42)
T ss_dssp SSSSTTSEEEEETT-EEEEEESTTEE
T ss_pred CcCCCCCEEEcCCC-CEEeeCCCCcE
Confidence 46888999998654 89999999953
No 129
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=80.37 E-value=1.9 Score=43.68 Aligned_cols=35 Identities=31% Similarity=0.398 Sum_probs=27.7
Q ss_pred CCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 398 DNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
+.+...+.||+|.||+||.|.- ..|+.||||.++.
T Consensus 17 g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~ 52 (370)
T KOG0583|consen 17 GKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDR 52 (370)
T ss_pred CceeeeeeecCCCCeeEEEeeeccCCCeEEEEEech
Confidence 3444558899999999999965 5689999996643
No 130
>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5.5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.
Probab=80.13 E-value=0.55 Score=45.57 Aligned_cols=40 Identities=20% Similarity=0.123 Sum_probs=0.0
Q ss_pred EeecchhhhHHHHHHHHHHHHhhhhhhhhhhhhhhccccC
Q 035536 328 IGCSGGLVLLFLLIGIWWLYKFVKRKRQIKLKQKFFKRNG 367 (445)
Q Consensus 328 i~i~~~~~~~ill~~~~~~~~~~~~~k~~~~~~~~~~~~~ 367 (445)
.+++++++++++.+++.+.|+++|+.|.....+..|...|
T Consensus 151 paVVI~~iLLIA~iIa~icyrrkR~GK~~~ee~~~f~~KG 190 (290)
T PF05454_consen 151 PAVVIAAILLIAGIIACICYRRKRKGKMSLEEQKTFISKG 190 (290)
T ss_dssp ----------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccccccchhHHHHhcC
Confidence 3333333333333333334443333333322334444333
No 131
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=79.46 E-value=1.7 Score=44.75 Aligned_cols=39 Identities=23% Similarity=0.333 Sum_probs=31.6
Q ss_pred ccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 394 EKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 394 ~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
.+..|.|.....||+|.||.|-++.- .++..||||.|..
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K 132 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPK 132 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeech
Confidence 34556777778899999999999875 5789999999943
No 132
>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A ....
Probab=79.35 E-value=0.14 Score=39.29 Aligned_cols=16 Identities=19% Similarity=0.247 Sum_probs=13.4
Q ss_pred eeechhhccccCCCCC
Q 035536 387 LFTSNDLEKATDNYNT 402 (445)
Q Consensus 387 ~ft~~eL~~aT~~F~~ 402 (445)
.+||||..+|...|..
T Consensus 56 P~TYEDP~qAV~eFAk 71 (75)
T PF14575_consen 56 PHTYEDPNQAVREFAK 71 (75)
T ss_dssp GGGSSSHHHHHHHCSS
T ss_pred cccccCHHHHHHHHHh
Confidence 3789999999988874
No 133
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=79.05 E-value=0.4 Score=50.84 Aligned_cols=42 Identities=29% Similarity=0.457 Sum_probs=32.0
Q ss_pred eeeccCCCceEEEEEECC-CCEEEEEEcccCCcccHhHhhhcC
Q 035536 404 RILGQGGQGTVYKGMLTN-GRIVAVKKSKLVDESNVEQFINEV 445 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L~d-g~~VAVKkl~~~~~~~~~eF~~Ev 445 (445)
-.||.|+||.|||++-.+ +...|-|.+...+..+.++|+-||
T Consensus 38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEI 80 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEI 80 (1187)
T ss_pred hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhh
Confidence 458999999999998755 345577777666667778888775
No 134
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.
Probab=79.02 E-value=2.4 Score=26.73 Aligned_cols=28 Identities=29% Similarity=0.773 Sum_probs=20.7
Q ss_pred ccCCCCccccCCCCCeeeecCCCCCCCCC
Q 035536 253 SCNLNQECLMQLSSGYVCLCDSLVDGRYC 281 (445)
Q Consensus 253 ~C~~ns~C~~~~~~g~~C~C~~g~~g~~c 281 (445)
.|..++.|.+.. .+|.|.|..||.|..|
T Consensus 10 ~C~~~~~C~~~~-~~~~C~C~~g~~g~~C 37 (38)
T cd00054 10 PCQNGGTCVNTV-GSYRCSCPPGYTGRNC 37 (38)
T ss_pred CcCCCCEeECCC-CCeEeECCCCCcCCcC
Confidence 576677887643 3699999999877655
No 135
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=78.52 E-value=0.66 Score=46.71 Aligned_cols=37 Identities=27% Similarity=0.381 Sum_probs=30.1
Q ss_pred CCCCCceeeccCCCceEEEEEEC----CCCEEEEEEcccCC
Q 035536 398 DNYNTNRILGQGGQGTVYKGMLT----NGRIVAVKKSKLVD 434 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L~----dg~~VAVKkl~~~~ 434 (445)
+.|...+.||+|.|++|||+++. ..+.||+|.+...+
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts 76 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS 76 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc
Confidence 44666789999999999999983 35789999997643
No 136
>PHA03210 serine/threonine kinase US3; Provisional
Probab=78.51 E-value=0.84 Score=48.21 Aligned_cols=24 Identities=17% Similarity=0.261 Sum_probs=19.7
Q ss_pred cCCCCCceeeccCCCceEEEEEEC
Q 035536 397 TDNYNTNRILGQGGQGTVYKGMLT 420 (445)
Q Consensus 397 T~~F~~~~~IG~G~fGtVYKG~L~ 420 (445)
.++|...+.||+|+||+||++.+.
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~ 170 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALR 170 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEe
Confidence 356666788999999999998773
No 137
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=78.46 E-value=1.7 Score=46.87 Aligned_cols=34 Identities=29% Similarity=0.384 Sum_probs=26.0
Q ss_pred ceeeccCCCceEEEEEECC-CCEEEEEEcccCCcc
Q 035536 403 NRILGQGGQGTVYKGMLTN-GRIVAVKKSKLVDES 436 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L~d-g~~VAVKkl~~~~~~ 436 (445)
.-+||+|.||+||-|.-.+ ...+|||-+.+.+.+
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr 614 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSR 614 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecccccch
Confidence 4579999999999998644 457899998654333
No 138
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=78.17 E-value=1.9 Score=42.56 Aligned_cols=34 Identities=29% Similarity=0.394 Sum_probs=25.5
Q ss_pred CCCCceeeccCCCceEEEEEECCC--CEEEEEEccc
Q 035536 399 NYNTNRILGQGGQGTVYKGMLTNG--RIVAVKKSKL 432 (445)
Q Consensus 399 ~F~~~~~IG~G~fGtVYKG~L~dg--~~VAVKkl~~ 432 (445)
.+...+.||+|+||.||++.-.+. ..+|+|.-..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~ 54 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKK 54 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEe
Confidence 455568899999999999986443 4677776643
No 139
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=77.27 E-value=0.44 Score=48.42 Aligned_cols=29 Identities=48% Similarity=0.712 Sum_probs=24.4
Q ss_pred ceeeccCCCceEEEEE-ECCCCEEEEEEcc
Q 035536 403 NRILGQGGQGTVYKGM-LTNGRIVAVKKSK 431 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~-L~dg~~VAVKkl~ 431 (445)
-++||+|||..|||+. |...+-||||.-.
T Consensus 468 LhLLGrGGFSEVyKAFDl~EqRYvAvKIHq 497 (775)
T KOG1151|consen 468 LHLLGRGGFSEVYKAFDLTEQRYVAVKIHQ 497 (775)
T ss_pred HHHhccccHHHHHHhcccchhheeeEeeeh
Confidence 3679999999999995 4678899999863
No 140
>smart00181 EGF Epidermal growth factor-like domain.
Probab=76.98 E-value=2.7 Score=26.32 Aligned_cols=27 Identities=26% Similarity=0.806 Sum_probs=19.9
Q ss_pred ccCCCCccccCCCCCeeeecCCCCCC-CCC
Q 035536 253 SCNLNQECLMQLSSGYVCLCDSLVDG-RYC 281 (445)
Q Consensus 253 ~C~~ns~C~~~~~~g~~C~C~~g~~g-~~c 281 (445)
.|..+ .|.+. ..+|.|.|..||.| ..|
T Consensus 7 ~C~~~-~C~~~-~~~~~C~C~~g~~g~~~C 34 (35)
T smart00181 7 PCSNG-TCINT-PGSYTCSCPPGYTGDKRC 34 (35)
T ss_pred CCCCC-EEECC-CCCeEeECCCCCccCCcc
Confidence 57766 88765 34899999999877 443
No 141
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=76.76 E-value=0.87 Score=47.63 Aligned_cols=42 Identities=31% Similarity=0.592 Sum_probs=35.3
Q ss_pred eeeccCCCceEEEEEECCCCEEEEEEccc--CCcccHhHhhhcC
Q 035536 404 RILGQGGQGTVYKGMLTNGRIVAVKKSKL--VDESNVEQFINEV 445 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L~dg~~VAVKkl~~--~~~~~~~eF~~Ev 445 (445)
+.||+||...|||..-.|.+.+|+||... .+.+..+.|.+|+
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI 410 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEI 410 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHH
Confidence 67999999999999998889999999853 4556677888885
No 142
>KOG1214 consensus Nidogen and related basement membrane protein proteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=75.98 E-value=2.8 Score=45.72 Aligned_cols=40 Identities=23% Similarity=0.549 Sum_probs=26.9
Q ss_pred cccCCC--CccccCCCCCeeeecCCCCCCCCCCCCccccCCCCCCCCCCCCCCCC
Q 035536 252 TSCNLN--QECLMQLSSGYVCLCDSLVDGRYCPGRLICNTSNGYNCSGCPHGYSS 304 (445)
Q Consensus 252 ~~C~~n--s~C~~~~~~g~~C~C~~g~~g~~c~~~~~C~~~~~~~C~di~~ec~~ 304 (445)
..|.-+ ..|....+..|.|.|.+| +.+++.-|+|.| ||+.
T Consensus 791 h~C~i~g~a~c~~hGgs~y~C~CLPG------------fsGDG~~c~dvD-eC~p 832 (1289)
T KOG1214|consen 791 HTCAIAGQARCVHHGGSTYSCACLPG------------FSGDGHQCTDVD-ECSP 832 (1289)
T ss_pred cccCcCCceEEEecCCceEEEeecCC------------ccCCcccccccc-ccCc
Confidence 456533 334444556799999999 677777777776 7764
No 143
>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins
Probab=75.93 E-value=2.9 Score=26.33 Aligned_cols=26 Identities=31% Similarity=0.649 Sum_probs=20.2
Q ss_pred ccCCCCccccCCCCCeeeecCCCCCCCCC
Q 035536 253 SCNLNQECLMQLSSGYVCLCDSLVDGRYC 281 (445)
Q Consensus 253 ~C~~ns~C~~~~~~g~~C~C~~g~~g~~c 281 (445)
.|..+++|... ..+|.|++||.|..|
T Consensus 7 ~C~~~G~C~~~---~g~C~C~~g~~G~~C 32 (32)
T PF07974_consen 7 ICSGHGTCVSP---CGRCVCDSGYTGPDC 32 (32)
T ss_pred ccCCCCEEeCC---CCEEECCCCCcCCCC
Confidence 68888888653 348999999888655
No 144
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=74.56 E-value=1.6 Score=44.21 Aligned_cols=44 Identities=32% Similarity=0.349 Sum_probs=32.8
Q ss_pred eechhhccccCCCCCceeeccCCCceEEEEEECC-CCEEEEEEccc
Q 035536 388 FTSNDLEKATDNYNTNRILGQGGQGTVYKGMLTN-GRIVAVKKSKL 432 (445)
Q Consensus 388 ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L~d-g~~VAVKkl~~ 432 (445)
.+-.+..+||+ |+--.+||+|.||.|..+.-.. ....|||.|+.
T Consensus 340 ~~~~d~i~~tD-FnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkK 384 (683)
T KOG0696|consen 340 SSKRDRIKATD-FNFLMVLGKGSFGKVLLAERKGTDELYAIKILKK 384 (683)
T ss_pred CCcccceeecc-cceEEEeccCccceeeeecccCcchhhhhhhhcc
Confidence 44456566664 7777899999999999887532 35789999965
No 145
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=73.26 E-value=4.3 Score=44.87 Aligned_cols=46 Identities=26% Similarity=0.481 Sum_probs=35.4
Q ss_pred eechhhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccC
Q 035536 388 FTSNDLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLV 433 (445)
Q Consensus 388 ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~ 433 (445)
+.++.+-..++-|....+||+|-+|.|||+.= .+|+.+|||.+...
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~ 55 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT 55 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC
Confidence 34445555566666678999999999999975 67899999999653
No 146
>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains. They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].
Probab=73.25 E-value=3.8 Score=37.65 Aligned_cols=24 Identities=29% Similarity=0.389 Sum_probs=13.6
Q ss_pred EEEEeecchhhhHHHHHHHHHHHH
Q 035536 325 YIVIGCSGGLVLLFLLIGIWWLYK 348 (445)
Q Consensus 325 ~iii~i~~~~~~~ill~~~~~~~~ 348 (445)
.|+++++++++.+++++++..+++
T Consensus 38 ~I~iaiVAG~~tVILVI~i~v~vR 61 (221)
T PF08374_consen 38 KIMIAIVAGIMTVILVIFIVVLVR 61 (221)
T ss_pred eeeeeeecchhhhHHHHHHHHHHH
Confidence 456666666655555555555544
No 147
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=72.87 E-value=2 Score=44.95 Aligned_cols=37 Identities=27% Similarity=0.432 Sum_probs=30.1
Q ss_pred cccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcc
Q 035536 395 KATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSK 431 (445)
Q Consensus 395 ~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~ 431 (445)
+.-++|.-.++||+|.|.+||+++- ..++..|||+|.
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~ 107 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLD 107 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhh
Confidence 3445666668999999999999976 457899999984
No 148
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=71.99 E-value=2.7 Score=40.80 Aligned_cols=38 Identities=26% Similarity=0.346 Sum_probs=29.8
Q ss_pred eechhhccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 388 FTSNDLEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 388 ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
+++++.+.. +.||.|.||.|...+. .+|...|.|.|+.
T Consensus 41 ~~l~dfe~~-------~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k 79 (355)
T KOG0616|consen 41 YSLQDFERL-------KTLGTGSFGRVHLVREKHSGNYYAMKVLDK 79 (355)
T ss_pred cchhhhhhe-------eeeccCccceEEEEEEccCCceeehhhcCH
Confidence 555555444 8899999999998887 4578899999954
No 149
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=71.78 E-value=1.6 Score=41.83 Aligned_cols=29 Identities=34% Similarity=0.488 Sum_probs=25.2
Q ss_pred ceeeccCCCceEEEEEE-CCCCEEEEEEcc
Q 035536 403 NRILGQGGQGTVYKGML-TNGRIVAVKKSK 431 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~ 431 (445)
++-||-|+||.||..+- +||+.||.||+-
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~p 87 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMP 87 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcc
Confidence 37799999999998877 579999999984
No 150
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=71.41 E-value=3.9 Score=37.05 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=26.6
Q ss_pred CceeeccCCCceEEEEEECCCCEEEEEEcccCCc
Q 035536 402 TNRILGQGGQGTVYKGMLTNGRIVAVKKSKLVDE 435 (445)
Q Consensus 402 ~~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~~~ 435 (445)
..++|++|.++.||.|.+. |..||+|.-+..+.
T Consensus 26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~ 58 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRDSP 58 (201)
T ss_pred hhhhhhcccccEEEEeecc-CceEEEEEecCCcc
Confidence 3478999999999999994 56899998765443
No 151
>PTZ00046 rifin; Provisional
Probab=71.19 E-value=1.8 Score=43.09 Aligned_cols=27 Identities=26% Similarity=0.501 Sum_probs=11.7
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 035536 336 LLFLLIGIWWLYKFVKRKRQIKLKQKF 362 (445)
Q Consensus 336 ~~ill~~~~~~~~~~~~~k~~~~~~~~ 362 (445)
+++++++++.++.|+||+|+.+++.++
T Consensus 326 VIVLIMvIIYLILRYRRKKKMkKKLQY 352 (358)
T PTZ00046 326 VIVLIMVIIYLILRYRRKKKMKKKLQY 352 (358)
T ss_pred HHHHHHHHHHHHHHhhhcchhHHHHHH
Confidence 333333344444444444444444443
No 152
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=70.60 E-value=3.1 Score=41.13 Aligned_cols=33 Identities=30% Similarity=0.554 Sum_probs=27.0
Q ss_pred CCCCCceeeccCCCceEEEEE-ECCCCEEEEEEc
Q 035536 398 DNYNTNRILGQGGQGTVYKGM-LTNGRIVAVKKS 430 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~-L~dg~~VAVKkl 430 (445)
-+|...+.||+|.||..+.|+ |=++++||||-=
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfE 61 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFE 61 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEec
Confidence 356666889999999999996 357899999964
No 153
>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms]
Probab=70.05 E-value=4.9 Score=48.78 Aligned_cols=34 Identities=24% Similarity=0.682 Sum_probs=25.5
Q ss_pred CCcccCCCCccccCCCCCeeeecCCCCCCCCCCCC
Q 035536 250 NPTSCNLNQECLMQLSSGYVCLCDSLVDGRYCPGR 284 (445)
Q Consensus 250 ~~~~C~~ns~C~~~~~~g~~C~C~~g~~g~~c~~~ 284 (445)
.+..|..++.|.... .||.|+|+.||.|..|.-.
T Consensus 3907 ~snPC~~GgtCip~~-n~f~CnC~~gyTG~~Ce~~ 3940 (4289)
T KOG1219|consen 3907 ASNPCLTGGTCIPFY-NGFLCNCPNGYTGKRCEAR 3940 (4289)
T ss_pred cCCCCCCCCEEEecC-CCeeEeCCCCccCceeecc
Confidence 445677777887532 4899999999999988643
No 154
>TIGR01477 RIFIN variant surface antigen, rifin family. This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.
Probab=69.78 E-value=2 Score=42.60 Aligned_cols=26 Identities=27% Similarity=0.497 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhh
Q 035536 337 LFLLIGIWWLYKFVKRKRQIKLKQKF 362 (445)
Q Consensus 337 ~ill~~~~~~~~~~~~~k~~~~~~~~ 362 (445)
++++++++.+..|+||+|+.+++.++
T Consensus 322 IVLIMvIIYLILRYRRKKKMkKKLQY 347 (353)
T TIGR01477 322 IVLIMVIIYLILRYRRKKKMKKKLQY 347 (353)
T ss_pred HHHHHHHHHHHHHhhhcchhHHHHHH
Confidence 33333333344444444444444443
No 155
>PTZ00382 Variant-specific surface protein (VSP); Provisional
Probab=69.12 E-value=5.6 Score=32.02 Aligned_cols=7 Identities=29% Similarity=0.344 Sum_probs=2.8
Q ss_pred EEeecch
Q 035536 327 VIGCSGG 333 (445)
Q Consensus 327 ii~i~~~ 333 (445)
+++++++
T Consensus 68 iagi~vg 74 (96)
T PTZ00382 68 IAGISVA 74 (96)
T ss_pred EEEEEee
Confidence 3444433
No 156
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=67.46 E-value=5.9 Score=38.23 Aligned_cols=37 Identities=41% Similarity=0.553 Sum_probs=29.5
Q ss_pred echhhccccCCCCCceeeccCCCceEEEEEEC-CCCEEEEEEccc
Q 035536 389 TSNDLEKATDNYNTNRILGQGGQGTVYKGMLT-NGRIVAVKKSKL 432 (445)
Q Consensus 389 t~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L~-dg~~VAVKkl~~ 432 (445)
...||+.. ..||.|.-|+|+|.+.. .|..+|||.++.
T Consensus 90 dindl~~l-------~dlGsGtcG~V~k~~~rs~~~iiAVK~M~r 127 (391)
T KOG0983|consen 90 DINDLENL-------GDLGSGTCGQVWKMRFRSTGHIIAVKQMRR 127 (391)
T ss_pred ChHHhhhH-------HhhcCCCccceEEEEEcccceEEEEEeecc
Confidence 44566555 55999999999999984 488999999965
No 157
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=67.09 E-value=1.5 Score=44.97 Aligned_cols=34 Identities=32% Similarity=0.612 Sum_probs=27.4
Q ss_pred CCCCCceeeccCCCceEEEEEECC-CCEEEEEEcc
Q 035536 398 DNYNTNRILGQGGQGTVYKGMLTN-GRIVAVKKSK 431 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L~d-g~~VAVKkl~ 431 (445)
+.|..-++||+||||.||--...+ |.-.|-|+|.
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~ 219 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLD 219 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHH
Confidence 457778999999999999887743 6777888873
No 158
>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function.
Probab=66.12 E-value=9.7 Score=36.67 Aligned_cols=9 Identities=11% Similarity=0.575 Sum_probs=6.7
Q ss_pred CcccEEEEE
Q 035536 228 DQVPAMLEW 236 (445)
Q Consensus 228 ~~~p~~L~W 236 (445)
.+.|+.+++
T Consensus 134 ~~~PI~V~F 142 (278)
T PF06697_consen 134 SGKPILVDF 142 (278)
T ss_pred cCCcEEEEe
Confidence 357888888
No 159
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=64.90 E-value=1 Score=49.22 Aligned_cols=32 Identities=31% Similarity=0.583 Sum_probs=24.4
Q ss_pred eechhhccccCCCCCceeeccCCCceEEEEEEC
Q 035536 388 FTSNDLEKATDNYNTNRILGQGGQGTVYKGMLT 420 (445)
Q Consensus 388 ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L~ 420 (445)
+-.+|++...+ ....+.||+|+||+||-|.-.
T Consensus 985 yv~deWe~~r~-it~~relg~gsfg~Vy~g~~n 1016 (1025)
T KOG4258|consen 985 YVPDEWEVSRE-ITLGRELGQGSFGMVYEGNAN 1016 (1025)
T ss_pred CChhHHHHHHH-HhhhhhhccCccceEEEecCC
Confidence 44566666555 566799999999999999763
No 160
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=64.37 E-value=5.1 Score=38.60 Aligned_cols=56 Identities=21% Similarity=0.381 Sum_probs=36.6
Q ss_pred eechhhcccc--CCCCCceeeccCCCceEEEEEE-CCCCEEEEEEcccCCcccHhHhhhc
Q 035536 388 FTSNDLEKAT--DNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKLVDESNVEQFINE 444 (445)
Q Consensus 388 ft~~eL~~aT--~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~~~~~~~~eF~~E 444 (445)
++.+||++.+ +-|+..+.||+|.||.+-...- +..+.|++|-... .....++|.+|
T Consensus 12 I~~~el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~-p~tt~~dF~rE 70 (378)
T KOG1345|consen 12 IPMEELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR-PQTTQADFVRE 70 (378)
T ss_pred cccccccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc-chhhHHHHHHH
Confidence 3334444332 3466678899999999988776 4456788887743 23345677776
No 161
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=63.88 E-value=1.8 Score=49.08 Aligned_cols=41 Identities=17% Similarity=0.315 Sum_probs=31.7
Q ss_pred hhccccCCCCCceeeccCCCceEEEEEEC-CCCEEEEEEccc
Q 035536 392 DLEKATDNYNTNRILGQGGQGTVYKGMLT-NGRIVAVKKSKL 432 (445)
Q Consensus 392 eL~~aT~~F~~~~~IG~G~fGtVYKG~L~-dg~~VAVKkl~~ 432 (445)
+|..--++|..-++||+|+||.|.-.... .+.+.|.|+|..
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK 110 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNK 110 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhH
Confidence 44444556766689999999999998884 467789999953
No 162
>KOG4289 consensus Cadherin EGF LAG seven-pass G-type receptor [Signal transduction mechanisms]
Probab=63.29 E-value=5.7 Score=46.03 Aligned_cols=30 Identities=30% Similarity=0.718 Sum_probs=22.5
Q ss_pred cccCCCCccccCCCCCeeeecCCCCCCCCCC
Q 035536 252 TSCNLNQECLMQLSSGYVCLCDSLVDGRYCP 282 (445)
Q Consensus 252 ~~C~~ns~C~~~~~~g~~C~C~~g~~g~~c~ 282 (445)
..|..|+.|.... .||.|.|.+||-|.+|.
T Consensus 1245 ~pC~nng~C~srE-ggYtCeCrpg~tGehCE 1274 (2531)
T KOG4289|consen 1245 GPCGNNGRCRSRE-GGYTCECRPGFTGEHCE 1274 (2531)
T ss_pred CCCCCCCceEEec-CceeEEecCCcccccee
Confidence 3577778887522 38999999999998885
No 163
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=62.74 E-value=3.9 Score=41.44 Aligned_cols=29 Identities=34% Similarity=0.457 Sum_probs=25.1
Q ss_pred eeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 404 RILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
+.||+|.||.|-++.- ..|+.||||.++.
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrK 88 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRK 88 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhh
Confidence 5599999999999976 5699999999864
No 164
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=59.92 E-value=3.8 Score=44.06 Aligned_cols=33 Identities=39% Similarity=0.564 Sum_probs=26.8
Q ss_pred CCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 400 YNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
|..-++||.|.+|.|||++- ..+..+|||.++.
T Consensus 17 yellqrvgsgTygdvyKaRd~~s~elaavkvVkL 50 (829)
T KOG0576|consen 17 YELLQRVGSGTYGDVYKARDKRSGELAAVKVVKL 50 (829)
T ss_pred hhheeeecCCcccchhhhcccccCchhhheeeec
Confidence 33347899999999999975 4578899999875
No 165
>PF08114 PMP1_2: ATPase proteolipid family; InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase. Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].
Probab=59.59 E-value=18 Score=23.93 Aligned_cols=13 Identities=8% Similarity=0.322 Sum_probs=5.9
Q ss_pred HHHHHHHhhhhhh
Q 035536 342 GIWWLYKFVKRKR 354 (445)
Q Consensus 342 ~~~~~~~~~~~~k 354 (445)
+..++|+++..||
T Consensus 25 va~~iYRKw~aRk 37 (43)
T PF08114_consen 25 VALFIYRKWQARK 37 (43)
T ss_pred HHHHHHHHHHHHH
Confidence 3344555544443
No 166
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=58.71 E-value=2.9 Score=41.00 Aligned_cols=29 Identities=41% Similarity=0.509 Sum_probs=23.2
Q ss_pred eeeccCCCceEEEEEECC---CC--EEEEEEccc
Q 035536 404 RILGQGGQGTVYKGMLTN---GR--IVAVKKSKL 432 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L~d---g~--~VAVKkl~~ 432 (445)
..||+|.+|.|||++=.+ .+ ..|||+++.
T Consensus 30 g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~ 63 (438)
T KOG0666|consen 30 GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKG 63 (438)
T ss_pred ceecccccceeeEeeeccCCcccchhhHHHHHhc
Confidence 669999999999996633 23 689999965
No 167
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=58.61 E-value=3.3 Score=40.74 Aligned_cols=39 Identities=28% Similarity=0.382 Sum_probs=31.1
Q ss_pred echhhccccCCCCCceeeccCCCceEEEEE-ECCCCEEEEEEccc
Q 035536 389 TSNDLEKATDNYNTNRILGQGGQGTVYKGM-LTNGRIVAVKKSKL 432 (445)
Q Consensus 389 t~~eL~~aT~~F~~~~~IG~G~fGtVYKG~-L~dg~~VAVKkl~~ 432 (445)
+++|+-+.|+ ++||+|+++.|--.+ +..|...|||.+..
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidK 113 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDK 113 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhc
Confidence 4677777776 889999999997654 46788999999954
No 168
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=58.35 E-value=7.3 Score=41.33 Aligned_cols=34 Identities=24% Similarity=0.281 Sum_probs=28.8
Q ss_pred CCCCceeeccCCCceEEEEEECCCCEEEEEEcccC
Q 035536 399 NYNTNRILGQGGQGTVYKGMLTNGRIVAVKKSKLV 433 (445)
Q Consensus 399 ~F~~~~~IG~G~fGtVYKG~L~dg~~VAVKkl~~~ 433 (445)
.|++ +-|+.-..|.|||++|++|+.||||.-+..
T Consensus 163 ~f~~-~piaaASlaQVhrA~L~~G~~VaVKVQ~P~ 196 (538)
T KOG1235|consen 163 EFDE-EPIAAASLAQVHRARLKNGEDVAVKVQHPG 196 (538)
T ss_pred hcCc-chhhhcchhheEEEEecCCCEEEEEecCcC
Confidence 4554 568899999999999999999999998764
No 169
>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A ....
Probab=57.09 E-value=5 Score=25.97 Aligned_cols=11 Identities=27% Similarity=0.658 Sum_probs=8.3
Q ss_pred CCeeeecCCCC
Q 035536 266 SGYVCLCDSLV 276 (445)
Q Consensus 266 ~g~~C~C~~g~ 276 (445)
.+|+|.|+.||
T Consensus 17 g~~~C~C~~Gy 27 (36)
T PF14670_consen 17 GSYRCSCPPGY 27 (36)
T ss_dssp TSEEEE-STTE
T ss_pred CceEeECCCCC
Confidence 37999999993
No 170
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=52.25 E-value=19 Score=33.30 Aligned_cols=41 Identities=37% Similarity=0.540 Sum_probs=31.3
Q ss_pred cceeeechhhccccCCCCCceeeccCCC-ceEEEEEECCCCEEEEEEc
Q 035536 384 KTKLFTSNDLEKATDNYNTNRILGQGGQ-GTVYKGMLTNGRIVAVKKS 430 (445)
Q Consensus 384 ~~~~ft~~eL~~aT~~F~~~~~IG~G~f-GtVYKG~L~dg~~VAVKkl 430 (445)
+++.|+.. +.+|.--+.||.|.. |.|||..+ +|+..|+|..
T Consensus 28 KL~~F~~h-----~~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf 69 (207)
T PF13095_consen 28 KLEPFTHH-----GDDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLF 69 (207)
T ss_pred CcCCcCCC-----CCcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEe
Confidence 44556662 144544588999999 99999999 6889999993
No 171
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=52.24 E-value=8.1 Score=38.80 Aligned_cols=48 Identities=29% Similarity=0.380 Sum_probs=34.2
Q ss_pred eeeechhhccccCCCCCceeeccCCCceEEEEEEC-CCCEEEEEEcccCCc
Q 035536 386 KLFTSNDLEKATDNYNTNRILGQGGQGTVYKGMLT-NGRIVAVKKSKLVDE 435 (445)
Q Consensus 386 ~~ft~~eL~~aT~~F~~~~~IG~G~fGtVYKG~L~-dg~~VAVKkl~~~~~ 435 (445)
-+|...|.+ ++.|.....+|+|.||.|-+-.-. .+..||||.++...+
T Consensus 79 ~v~~~gD~l--~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k 127 (415)
T KOG0671|consen 79 YVYQVGDIL--TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK 127 (415)
T ss_pred EEEEecccc--ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH
Confidence 345555554 555666678999999999987652 368999999976543
No 172
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=51.51 E-value=7.4 Score=38.40 Aligned_cols=35 Identities=26% Similarity=0.442 Sum_probs=27.2
Q ss_pred CCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 398 DNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 398 ~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
++|+--++||+|.||.|..-.= ..|+..|||.|+.
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkK 203 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKK 203 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhh
Confidence 4566668999999999875543 3578899999965
No 173
>PHA02887 EGF-like protein; Provisional
Probab=51.35 E-value=13 Score=30.77 Aligned_cols=30 Identities=27% Similarity=0.546 Sum_probs=24.1
Q ss_pred ccCCCCcccc-CCCCCeeeecCCCCCCCCCCC
Q 035536 253 SCNLNQECLM-QLSSGYVCLCDSLVDGRYCPG 283 (445)
Q Consensus 253 ~C~~ns~C~~-~~~~g~~C~C~~g~~g~~c~~ 283 (445)
.|. |+.|.. ..-..+.|.|+.||.|.-|..
T Consensus 93 YCi-HG~C~yI~dL~epsCrC~~GYtG~RCE~ 123 (126)
T PHA02887 93 FCI-NGECMNIIDLDEKFCICNKGYTGIRCDE 123 (126)
T ss_pred Eee-CCEEEccccCCCceeECCCCcccCCCCc
Confidence 576 678988 555678999999999988854
No 174
>KOG4289 consensus Cadherin EGF LAG seven-pass G-type receptor [Signal transduction mechanisms]
Probab=50.19 E-value=23 Score=41.51 Aligned_cols=31 Identities=29% Similarity=0.572 Sum_probs=24.5
Q ss_pred CCCcccc-CCCCCeeeecCCCCCCCCCCCCcc
Q 035536 256 LNQECLM-QLSSGYVCLCDSLVDGRYCPGRLI 286 (445)
Q Consensus 256 ~ns~C~~-~~~~g~~C~C~~g~~g~~c~~~~~ 286 (445)
..+.|.. +...||.|.|..|+.|.+|....+
T Consensus 1726 ~~g~Cv~sp~a~GY~C~C~~g~~G~~Ce~~~d 1757 (2531)
T KOG4289|consen 1726 NQGTCVRSPGAHGYTCECPPGYTGPYCELRAD 1757 (2531)
T ss_pred cCceeecCCCCCceeEECCCcccCcchhhhcc
Confidence 3456766 444799999999999999987765
No 175
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=47.39 E-value=9.8 Score=38.67 Aligned_cols=29 Identities=34% Similarity=0.392 Sum_probs=25.2
Q ss_pred eeeccCCCceEEEEEECC-CCEEEEEEccc
Q 035536 404 RILGQGGQGTVYKGMLTN-GRIVAVKKSKL 432 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L~d-g~~VAVKkl~~ 432 (445)
+.||+|.-|+||...+.+ +...|+|.+..
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK 112 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDK 112 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecH
Confidence 789999999999999955 47899999954
No 176
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=46.71 E-value=24 Score=37.59 Aligned_cols=40 Identities=20% Similarity=0.177 Sum_probs=31.7
Q ss_pred hccccCCCCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 393 LEKATDNYNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 393 L~~aT~~F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
...-+..+.....||+|.|+.|..++- ..|..||||.++.
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idk 91 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDK 91 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehh
Confidence 334456677778899999999999977 3488999998854
No 177
>PF15345 TMEM51: Transmembrane protein 51
Probab=45.63 E-value=31 Score=32.22 Aligned_cols=30 Identities=27% Similarity=0.223 Sum_probs=15.6
Q ss_pred EEEeecchhhhHHHHHHHHHHHHhhhhhhh
Q 035536 326 IVIGCSGGLVLLFLLIGIWWLYKFVKRKRQ 355 (445)
Q Consensus 326 iii~i~~~~~~~ill~~~~~~~~~~~~~k~ 355 (445)
.++-++++++++++++.+.+-++.+||+++
T Consensus 59 SVAyVLVG~Gv~LLLLSICL~IR~KRr~rq 88 (233)
T PF15345_consen 59 SVAYVLVGSGVALLLLSICLSIRDKRRRRQ 88 (233)
T ss_pred EEEEehhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 344444555666666666555554444443
No 178
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=43.40 E-value=9.3 Score=40.03 Aligned_cols=29 Identities=31% Similarity=0.276 Sum_probs=22.0
Q ss_pred eeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 404 RILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
+-||+|.|..|-.+.- =.|..||||.+..
T Consensus 24 kTlG~GHFAVVKLArHVFTGekVAVKviDK 53 (864)
T KOG4717|consen 24 KTLGRGHFAVVKLARHVFTGEKVAVKVIDK 53 (864)
T ss_pred hhhcCCceehhhhhhhhcccceeEEEEecc
Confidence 5699999998865532 2588899999854
No 179
>PF12955 DUF3844: Domain of unknown function (DUF3844); InterPro: IPR024382 This presumed domain is found in fungal species. It contains 8 largely conserved cysteine residues. This domain is found in proteins thought to be located in the endoplasmic reticulum.
Probab=42.37 E-value=20 Score=29.17 Aligned_cols=33 Identities=21% Similarity=0.556 Sum_probs=21.5
Q ss_pred ccccccCCCCcccCCCCccccC-CC---CCeeeecCCCCCC
Q 035536 242 TCIEEYSSNPTSCNLNQECLMQ-LS---SGYVCLCDSLVDG 278 (445)
Q Consensus 242 ~C~~~~~~~~~~C~~ns~C~~~-~~---~g~~C~C~~g~~g 278 (445)
.|.++ ...|..|+.|... .. .=|.|.|..-.+.
T Consensus 7 aC~~~----Tn~CsgHG~C~~~~~~~~~~C~~C~C~~T~~~ 43 (103)
T PF12955_consen 7 ACENA----TNNCSGHGSCVKKYGSGGGDCFACKCKPTVVK 43 (103)
T ss_pred HHHHh----ccCCCCCceEeeccCCCccceEEEEeeccccc
Confidence 46553 3368899999872 21 2389999886443
No 180
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=41.90 E-value=1.3 Score=42.09 Aligned_cols=28 Identities=43% Similarity=0.586 Sum_probs=23.3
Q ss_pred eeeccCCCceEEEEEECC-CCEEEEEEcc
Q 035536 404 RILGQGGQGTVYKGMLTN-GRIVAVKKSK 431 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L~d-g~~VAVKkl~ 431 (445)
..||+|.||+|||+.-.+ |+.||+|+.-
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvl 51 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVL 51 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHH
Confidence 579999999999998744 6778998863
No 181
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=39.14 E-value=30 Score=36.96 Aligned_cols=32 Identities=28% Similarity=0.338 Sum_probs=25.9
Q ss_pred CCCceeeccCCCceEEEEEECC-CCEEEEEEcc
Q 035536 400 YNTNRILGQGGQGTVYKGMLTN-GRIVAVKKSK 431 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L~d-g~~VAVKkl~ 431 (445)
|..-+.+|+|+||.|..++... ...|.||.+.
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~ 595 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIF 595 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehh
Confidence 5556789999999999999844 4578899874
No 182
>PF08261 Carcinustatin: Carcinustatin peptide
Probab=38.74 E-value=14 Score=15.49 Aligned_cols=6 Identities=50% Similarity=1.220 Sum_probs=4.0
Q ss_pred ccCCCC
Q 035536 51 IYPFGI 56 (445)
Q Consensus 51 ~YPFgi 56 (445)
||-||+
T Consensus 3 py~fgl 8 (8)
T PF08261_consen 3 PYSFGL 8 (8)
T ss_pred cccccC
Confidence 677764
No 183
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=35.71 E-value=31 Score=27.76 Aligned_cols=8 Identities=50% Similarity=0.190 Sum_probs=3.6
Q ss_pred CCceEEEE
Q 035536 410 GQGTVYKG 417 (445)
Q Consensus 410 ~fGtVYKG 417 (445)
=+|+|-+-
T Consensus 56 i~G~V~~v 63 (97)
T COG1862 56 IVGTVTKV 63 (97)
T ss_pred eEEEEEEE
Confidence 34555443
No 184
>PF14610 DUF4448: Protein of unknown function (DUF4448)
Probab=35.55 E-value=23 Score=32.17 Aligned_cols=10 Identities=20% Similarity=0.428 Sum_probs=4.6
Q ss_pred eEEEeeCccc
Q 035536 204 SVSLVQGDWL 213 (445)
Q Consensus 204 ~a~~~~~~~~ 213 (445)
|++-++..|+
T Consensus 85 ~~~~i~~~wl 94 (189)
T PF14610_consen 85 YPWTIDPSWL 94 (189)
T ss_pred EEEEECHHHh
Confidence 4444444454
No 185
>PF09919 DUF2149: Uncharacterized conserved protein (DUF2149); InterPro: IPR018676 This family of conserved hypothetical proteins has no known function.
Probab=35.31 E-value=1.1e+02 Score=24.28 Aligned_cols=19 Identities=42% Similarity=0.933 Sum_probs=15.1
Q ss_pred ccC-CCceEEEEEECCCCEEEE
Q 035536 407 GQG-GQGTVYKGMLTNGRIVAV 427 (445)
Q Consensus 407 G~G-~fGtVYKG~L~dg~~VAV 427 (445)
|+| .-|+||| +++|+.|=|
T Consensus 71 G~G~~~G~aYr--l~~Gk~I~V 90 (92)
T PF09919_consen 71 GSGERLGTAYR--LKDGKLIYV 90 (92)
T ss_pred CCCeECeEEEE--cCCceEEEe
Confidence 555 5689999 999988765
No 186
>PF12259 DUF3609: Protein of unknown function (DUF3609); InterPro: IPR022048 This domain family is found in eukaryotes and viruses, and is typically between 348 and 360 amino acids in length.
Probab=34.95 E-value=29 Score=35.00 Aligned_cols=31 Identities=32% Similarity=0.775 Sum_probs=18.2
Q ss_pred EEEEeecchhhhHHHHHHHHHHHHhhhhhhh
Q 035536 325 YIVIGCSGGLVLLFLLIGIWWLYKFVKRKRQ 355 (445)
Q Consensus 325 ~iii~i~~~~~~~ill~~~~~~~~~~~~~k~ 355 (445)
...+++..+++++++++.++|++++.++|+.
T Consensus 298 ~~~i~v~~~~vli~vl~~~~~~~~~~~~~~~ 328 (361)
T PF12259_consen 298 IVHIAVCGAIVLIIVLISLAWLYRTFRRRQL 328 (361)
T ss_pred eEEEehhHHHHHHHHHHHHHhheeehHHHHh
Confidence 3445555555556666677777766555443
No 187
>PF02480 Herpes_gE: Alphaherpesvirus glycoprotein E; InterPro: IPR003404 Glycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI), functioning as an immunoglobulin G (IgG) Fc binding protein. gE is involved in virus spread but is not essential for propagation [].; GO: 0016020 membrane; PDB: 2GJ7_F 2GIY_B.
Probab=33.64 E-value=14 Score=38.36 Aligned_cols=17 Identities=18% Similarity=0.341 Sum_probs=8.8
Q ss_pred ccEEEEEEEe--ecccccc
Q 035536 230 VPAMLEWGEK--IGTCIEE 246 (445)
Q Consensus 230 ~p~~L~W~i~--~~~C~~~ 246 (445)
.-+.++|.-. +.+|.+.
T Consensus 181 f~~~i~W~~~~~~~~C~~~ 199 (439)
T PF02480_consen 181 FSLEIDWYYMPTDPSCAEM 199 (439)
T ss_dssp EEEEEEEEEE---TT-SEE
T ss_pred eeEEEEEEEecCCCCCceE
Confidence 4567788642 2367644
No 188
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=32.82 E-value=16 Score=30.71 Aligned_cols=13 Identities=23% Similarity=0.506 Sum_probs=7.3
Q ss_pred EEEEeecchhhhH
Q 035536 325 YIVIGCSGGLVLL 337 (445)
Q Consensus 325 ~iii~i~~~~~~~ 337 (445)
.|+++++++++++
T Consensus 68 ~Ii~gv~aGvIg~ 80 (122)
T PF01102_consen 68 GIIFGVMAGVIGI 80 (122)
T ss_dssp HHHHHHHHHHHHH
T ss_pred ehhHHHHHHHHHH
Confidence 4556666666443
No 189
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=32.15 E-value=56 Score=30.70 Aligned_cols=27 Identities=22% Similarity=0.404 Sum_probs=23.1
Q ss_pred eeec-cCCCceEEEEEECCCCEEEEEEcc
Q 035536 404 RILG-QGGQGTVYKGMLTNGRIVAVKKSK 431 (445)
Q Consensus 404 ~~IG-~G~fGtVYKG~L~dg~~VAVKkl~ 431 (445)
.+|| .||.|+||+.... +..++||+.+
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~ 64 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYR 64 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEee
Confidence 6898 8999999999985 6788998874
No 190
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=31.58 E-value=49 Score=25.64 Aligned_cols=8 Identities=50% Similarity=0.542 Sum_probs=0.0
Q ss_pred CCCceEEE
Q 035536 409 GGQGTVYK 416 (445)
Q Consensus 409 G~fGtVYK 416 (445)
|=+|+|-+
T Consensus 48 Gi~G~V~~ 55 (82)
T PF02699_consen 48 GIYGTVVE 55 (82)
T ss_dssp --------
T ss_pred cEEEEEEE
Confidence 44455543
No 191
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=31.53 E-value=21 Score=29.97 Aligned_cols=8 Identities=25% Similarity=0.318 Sum_probs=3.0
Q ss_pred hhHHHHHH
Q 035536 335 VLLFLLIG 342 (445)
Q Consensus 335 ~~~ill~~ 342 (445)
++++++..
T Consensus 91 GLmlL~~~ 98 (129)
T PF15099_consen 91 GLMLLACS 98 (129)
T ss_pred HHHHHHhh
Confidence 33333333
No 192
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=31.00 E-value=34 Score=36.08 Aligned_cols=28 Identities=29% Similarity=0.284 Sum_probs=23.1
Q ss_pred eeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 405 ILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 405 ~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
-.|+|-|++|-++.- ..|..||||.++.
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRn 467 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRN 467 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeec
Confidence 368999999999975 3477999999964
No 193
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=30.68 E-value=46 Score=34.83 Aligned_cols=33 Identities=39% Similarity=0.430 Sum_probs=26.8
Q ss_pred CCCceeeccCCCceEEEEEE-CCCCEEEEEEccc
Q 035536 400 YNTNRILGQGGQGTVYKGML-TNGRIVAVKKSKL 432 (445)
Q Consensus 400 F~~~~~IG~G~fGtVYKG~L-~dg~~VAVKkl~~ 432 (445)
+...+.||=|.|.|||.+-- .+.+-||+|+.|.
T Consensus 80 Y~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS 113 (590)
T KOG1290|consen 80 YHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS 113 (590)
T ss_pred EEEEEeccccccceeEEEeeccCCeEEEEEEEeh
Confidence 44457899999999998854 5678999999975
No 194
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=30.35 E-value=54 Score=31.89 Aligned_cols=21 Identities=29% Similarity=0.270 Sum_probs=9.4
Q ss_pred EEEEeecchhhhHHHHHHHHH
Q 035536 325 YIVIGCSGGLVLLFLLIGIWW 345 (445)
Q Consensus 325 ~iii~i~~~~~~~ill~~~~~ 345 (445)
+++|++.++++.+++++++.+
T Consensus 229 VVlIslAiALG~v~ll~l~Gi 249 (281)
T PF12768_consen 229 VVLISLAIALGTVFLLVLIGI 249 (281)
T ss_pred EEEEehHHHHHHHHHHHHHHH
Confidence 444444445544444433333
No 195
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=29.36 E-value=12 Score=35.15 Aligned_cols=33 Identities=30% Similarity=0.498 Sum_probs=27.2
Q ss_pred ceeeccCCCceEEEEE-ECCCCEEEEEEcccCCc
Q 035536 403 NRILGQGGQGTVYKGM-LTNGRIVAVKKSKLVDE 435 (445)
Q Consensus 403 ~~~IG~G~fGtVYKG~-L~dg~~VAVKkl~~~~~ 435 (445)
.+.+|+|.+.+||.|. +.+.+.+.||.|+....
T Consensus 43 vrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk 76 (338)
T KOG0668|consen 43 VRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK 76 (338)
T ss_pred HHHHcCccHhhHhcccccCCCceEEEeeechHHH
Confidence 4679999999999997 36778899999987543
No 196
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=28.39 E-value=43 Score=26.18 Aligned_cols=7 Identities=57% Similarity=0.515 Sum_probs=3.0
Q ss_pred CCCceEE
Q 035536 409 GGQGTVY 415 (445)
Q Consensus 409 G~fGtVY 415 (445)
|=+|+|-
T Consensus 49 Gi~G~V~ 55 (84)
T TIGR00739 49 GIIGTVT 55 (84)
T ss_pred CeEEEEE
Confidence 3345444
No 197
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=28.34 E-value=36 Score=33.39 Aligned_cols=26 Identities=19% Similarity=0.243 Sum_probs=13.8
Q ss_pred cchhhhHHHHHHHHHHHHhhhhhhhh
Q 035536 331 SGGLVLLFLLIGIWWLYKFVKRKRQI 356 (445)
Q Consensus 331 ~~~~~~~ill~~~~~~~~~~~~~k~~ 356 (445)
++.++++++++-++|.|||++|-+++
T Consensus 265 IliIVLIMvIIYLILRYRRKKKmkKK 290 (299)
T PF02009_consen 265 ILIIVLIMVIIYLILRYRRKKKMKKK 290 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 34444455555556666665554443
No 198
>PHA03265 envelope glycoprotein D; Provisional
Probab=27.90 E-value=44 Score=33.19 Aligned_cols=9 Identities=11% Similarity=-0.008 Sum_probs=4.2
Q ss_pred ceeEEeecc
Q 035536 85 KTELLDSYS 93 (445)
Q Consensus 85 ~~~V~~I~~ 93 (445)
+++|..+.+
T Consensus 76 ~veVr~Vts 84 (402)
T PHA03265 76 NVDLRIVTA 84 (402)
T ss_pred ceeeeeeec
Confidence 455555433
No 199
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=27.82 E-value=59 Score=31.60 Aligned_cols=29 Identities=38% Similarity=0.546 Sum_probs=26.3
Q ss_pred eeeccCCCceEEEEEECCCCEEEEEEccc
Q 035536 404 RILGQGGQGTVYKGMLTNGRIVAVKKSKL 432 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L~dg~~VAVKkl~~ 432 (445)
+.||.|.=+.||.|..++|..+|||--+.
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~ 125 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRL 125 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeec
Confidence 67999999999999999999999997654
No 200
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=27.42 E-value=20 Score=38.29 Aligned_cols=42 Identities=36% Similarity=0.485 Sum_probs=25.9
Q ss_pred eeeccCCCceEEEEEEC-CCCEEEEE--EcccC--CcccHhHhhhcC
Q 035536 404 RILGQGGQGTVYKGMLT-NGRIVAVK--KSKLV--DESNVEQFINEV 445 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L~-dg~~VAVK--kl~~~--~~~~~~eF~~Ev 445 (445)
.+||+|+|=|||||.-. +|..||=- ++++. +..+.+.|..||
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev 92 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEV 92 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHH
Confidence 67999999999999762 35556532 22222 223345676664
No 201
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=26.33 E-value=21 Score=35.34 Aligned_cols=36 Identities=25% Similarity=0.378 Sum_probs=29.1
Q ss_pred cCCCCCceeeccCCCceEEEEEECC-CCEEEEEEccc
Q 035536 397 TDNYNTNRILGQGGQGTVYKGMLTN-GRIVAVKKSKL 432 (445)
Q Consensus 397 T~~F~~~~~IG~G~fGtVYKG~L~d-g~~VAVKkl~~ 432 (445)
.++|+.-++||+|.+..|....+.. .+..|+|.+|.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkk 285 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKK 285 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHH
Confidence 4567777999999999999999843 56789998864
No 202
>KOG3482 consensus Small nuclear ribonucleoprotein (snRNP) SMF [RNA processing and modification]
Probab=25.25 E-value=84 Score=23.64 Aligned_cols=16 Identities=38% Similarity=0.457 Sum_probs=12.5
Q ss_pred eeeccCCCceEEEEEE
Q 035536 404 RILGQGGQGTVYKGML 419 (445)
Q Consensus 404 ~~IG~G~fGtVYKG~L 419 (445)
.++-+=.+|++|||+|
T Consensus 20 ~V~vkLKwg~eYkG~L 35 (79)
T KOG3482|consen 20 PVLVKLKWGQEYKGTL 35 (79)
T ss_pred eEEEEEecCcEEEEEE
Confidence 4555667899999998
No 203
>PF07547 RSD-2: RSD-2 N-terminal domain; InterPro: IPR011508 This domain is found in three copies at the N terminus of the Caenorhabditis elegans RSD-2 protein. RSD-2 (RNAi spreading defective) is involved in systemic RNAi []. Mutations in the rsd-2 gene do not affect somatic genes but only germline expressed genes [].
Probab=24.36 E-value=1e+02 Score=24.17 Aligned_cols=38 Identities=32% Similarity=0.474 Sum_probs=21.9
Q ss_pred cCCCceEEEEEE--C------CCCE--EEEEEcccCCcccHhHhhhcC
Q 035536 408 QGGQGTVYKGML--T------NGRI--VAVKKSKLVDESNVEQFINEV 445 (445)
Q Consensus 408 ~G~fGtVYKG~L--~------dg~~--VAVKkl~~~~~~~~~eF~~Ev 445 (445)
.--.+.|||..+ . .+.+ -+|+.++.....+.++|++.|
T Consensus 30 ~~~~~~vyk~~I~vndld~~~~~~~lFKvv~~~~~~~~~~~~~f~~~m 77 (84)
T PF07547_consen 30 SMERGTVYKTEITVNDLDYEDNGNPLFKVVSILKKLDNEDNEEFMQKM 77 (84)
T ss_pred ccccccEEEEEEEEEeeccccCCCCeEEEEeeccccccccHHHHHHHH
Confidence 334578998876 2 1222 255556555556667777653
No 204
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region. The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].
Probab=24.32 E-value=18 Score=31.62 Aligned_cols=26 Identities=23% Similarity=0.332 Sum_probs=15.0
Q ss_pred eeEEEEeecchhhhHHHHHHHHHHHHh
Q 035536 323 VKYIVIGCSGGLVLLFLLIGIWWLYKF 349 (445)
Q Consensus 323 ~~~iii~i~~~~~~~ill~~~~~~~~~ 349 (445)
...++++++++++++ +++++++++.+
T Consensus 51 VIGvVVGVGg~ill~-il~lvf~~c~r 76 (154)
T PF04478_consen 51 VIGVVVGVGGPILLG-ILALVFIFCIR 76 (154)
T ss_pred EEEEEecccHHHHHH-HHHhheeEEEe
Confidence 345777877776655 44445544433
No 205
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=24.27 E-value=64 Score=26.43 Aligned_cols=8 Identities=50% Similarity=0.484 Sum_probs=3.8
Q ss_pred CCCceEEE
Q 035536 409 GGQGTVYK 416 (445)
Q Consensus 409 G~fGtVYK 416 (445)
|=+|+|-+
T Consensus 64 Gi~G~Vv~ 71 (106)
T PRK05585 64 GIIGKVTK 71 (106)
T ss_pred CeEEEEEE
Confidence 44455543
No 206
>PF12877 DUF3827: Domain of unknown function (DUF3827); InterPro: IPR024606 The function of the proteins in this entry is not currently known, but one of the human proteins (Q9HCM3 from SWISSPROT) has been implicated in pilocytic astrocytomas [, , ]. In the majority of cases of pilocytic astrocytomas a tandem duplication produces an in-frame fusion of the gene encoding this protein and the BRAF oncogene. The resulting fusion protein has constitutive BRAF kinase activity and is capable of transforming cells.
Probab=24.11 E-value=59 Score=35.03 Aligned_cols=10 Identities=20% Similarity=0.228 Sum_probs=5.6
Q ss_pred ccEEEEEEEe
Q 035536 230 VPAMLEWGEK 239 (445)
Q Consensus 230 ~p~~L~W~i~ 239 (445)
.|++|-+.+.
T Consensus 205 nP~EL~YyV~ 214 (684)
T PF12877_consen 205 NPVELTYYVE 214 (684)
T ss_pred CceEEEEEEE
Confidence 3566666554
No 207
>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein. MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.
Probab=23.13 E-value=42 Score=21.92 Aligned_cols=24 Identities=21% Similarity=0.339 Sum_probs=15.6
Q ss_pred ccCCCCccccCCCCCeeeecCCCC
Q 035536 253 SCNLNQECLMQLSSGYVCLCDSLV 276 (445)
Q Consensus 253 ~C~~ns~C~~~~~~g~~C~C~~g~ 276 (445)
.|-.|+.|.......+.|.|..||
T Consensus 6 ~cP~NA~C~~~~dG~eecrCllgy 29 (37)
T PF12946_consen 6 KCPANAGCFRYDDGSEECRCLLGY 29 (37)
T ss_dssp ---TTEEEEEETTSEEEEEE-TTE
T ss_pred cCCCCcccEEcCCCCEEEEeeCCc
Confidence 577899998844336899999994
No 208
>PF13268 DUF4059: Protein of unknown function (DUF4059)
Probab=22.69 E-value=66 Score=24.20 Aligned_cols=14 Identities=29% Similarity=0.416 Sum_probs=5.9
Q ss_pred HHHHHHHHHhhhhh
Q 035536 340 LIGIWWLYKFVKRK 353 (445)
Q Consensus 340 l~~~~~~~~~~~~~ 353 (445)
++..+|+.+|.+++
T Consensus 22 ~~~~~wi~~Ra~~~ 35 (72)
T PF13268_consen 22 LVSGIWILWRALRK 35 (72)
T ss_pred HHHHHHHHHHHHHc
Confidence 34444444443333
No 209
>PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein).
Probab=22.41 E-value=56 Score=33.46 Aligned_cols=15 Identities=20% Similarity=0.155 Sum_probs=7.9
Q ss_pred EEEEeecchhhhHHH
Q 035536 325 YIVIGCSGGLVLLFL 339 (445)
Q Consensus 325 ~iii~i~~~~~~~il 339 (445)
-+|++|.++++++|.
T Consensus 367 gaIaGIsvavvvvVg 381 (397)
T PF03302_consen 367 GAIAGISVAVVVVVG 381 (397)
T ss_pred cceeeeeehhHHHHH
Confidence 355666555554443
No 210
>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5.5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.
Probab=22.11 E-value=30 Score=33.76 Aligned_cols=32 Identities=22% Similarity=0.098 Sum_probs=0.0
Q ss_pred EEEeecchhhhHHHHHHHHHHHHhhhhhhhhh
Q 035536 326 IVIGCSGGLVLLFLLIGIWWLYKFVKRKRQIK 357 (445)
Q Consensus 326 iii~i~~~~~~~ill~~~~~~~~~~~~~k~~~ 357 (445)
+...|.+++++++++++++++....||||+.+
T Consensus 146 L~T~IpaVVI~~iLLIA~iIa~icyrrkR~GK 177 (290)
T PF05454_consen 146 LHTFIPAVVIAAILLIAGIIACICYRRKRKGK 177 (290)
T ss_dssp --------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhccc
Confidence 44455455555666666666777777665433
No 211
>PF03229 Alpha_GJ: Alphavirus glycoprotein J; InterPro: IPR004913 The exact function of the herpesvirus glycoprotein J is unknown, but it appears to play a role in the inhibition of apotosis of the host cell [].; GO: 0019050 suppression by virus of host apoptosis
Probab=21.65 E-value=89 Score=25.87 Aligned_cols=13 Identities=38% Similarity=0.304 Sum_probs=5.3
Q ss_pred EeecchhhhHHHH
Q 035536 328 IGCSGGLVLLFLL 340 (445)
Q Consensus 328 i~i~~~~~~~ill 340 (445)
-+++.++.++++.
T Consensus 87 p~VIGGLcaL~La 99 (126)
T PF03229_consen 87 PLVIGGLCALTLA 99 (126)
T ss_pred hhhhhHHHHHHHH
Confidence 3334444444433
No 212
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=21.13 E-value=26 Score=36.66 Aligned_cols=36 Identities=28% Similarity=0.546 Sum_probs=28.5
Q ss_pred cCCCCCceeeccCCCceEEEEEEC-CCCEEEEEEccc
Q 035536 397 TDNYNTNRILGQGGQGTVYKGMLT-NGRIVAVKKSKL 432 (445)
Q Consensus 397 T~~F~~~~~IG~G~fGtVYKG~L~-dg~~VAVKkl~~ 432 (445)
-++|.....+|.||||+|+.+... |+-.-|||+|..
T Consensus 48 a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritl 84 (516)
T KOG1033|consen 48 ANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITL 84 (516)
T ss_pred hccccccccccccCccccCCccccccchhhHHHHhcc
Confidence 356777889999999999988774 344779998854
No 213
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=21.07 E-value=51 Score=24.58 Aligned_cols=11 Identities=36% Similarity=0.685 Sum_probs=4.4
Q ss_pred EEeecchhhhH
Q 035536 327 VIGCSGGLVLL 337 (445)
Q Consensus 327 ii~i~~~~~~~ 337 (445)
.|+++.++++.
T Consensus 35 aIGvi~gi~~~ 45 (68)
T PF04971_consen 35 AIGVIGGIFFG 45 (68)
T ss_pred hHHHHHHHHHH
Confidence 34444444333
Done!