BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035538
         (171 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q5U3A8|PPR21_DANRE Protein phosphatase 1 regulatory subunit 21 OS=Danio rerio
           GN=ppp1r21 PE=2 SV=1
          Length = 665

 Score = 35.4 bits (80), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 28/48 (58%)

Query: 47  AKAIHFHNPCRGIAQKRSKIWRSNATSGEVLPTESTPLETSQEMVSST 94
           +KA+HFH  CR +A++ +   RS  T GE L   +  +   Q+ +S+T
Sbjct: 572 SKAVHFHAECRAVAKRLAMAERSRDTLGEELKLANQNITRLQDELSTT 619


>sp|A4HH79|EFTS_LEIBR Elongation factor Ts, mitochondrial OS=Leishmania braziliensis
           GN=LbrM29_V2.0730 PE=3 SV=1
          Length = 276

 Score = 33.5 bits (75), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%)

Query: 40  CSHTELAAKAIHFHNPCRGIAQKRSKIWR-SNATSGEVLPTESTPLETSQEMVSSTGDES 98
           CS T+ AA+  HF   C    Q R ++ +  +AT+G VL   + P E ++++    G+E 
Sbjct: 93  CSETDFAARNEHFQRTC---VQARDQLRKLMDATNGAVL---ANPEEAAKQLSDIMGEE- 145

Query: 99  LSSVISVL 106
           L + I+VL
Sbjct: 146 LRAAIAVL 153


>sp|Q5ZL12|PPR21_CHICK Protein phosphatase 1 regulatory subunit 21 OS=Gallus gallus
           GN=PPP1R21 PE=2 SV=1
          Length = 779

 Score = 32.3 bits (72), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 41  SHTELA-AKAIHFHNPCRGIAQKRSKIWRSNATSGEVLPTESTPLETSQEMVSST 94
           SH +LA +K++HFH  CR +A++ S   +S  +  E L   S  +   Q+ + +T
Sbjct: 679 SHLQLADSKSVHFHAECRALAKRLSLAEKSKESLTEELKLASQSISRLQDELMTT 733


>sp|P25014|SECY_CYAPA Protein translocase subunit SecY OS=Cyanophora paradoxa GN=secY
           PE=3 SV=2
          Length = 492

 Score = 32.0 bits (71), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 9/86 (10%)

Query: 74  GEVLPTESTPLETSQEMVSSTGDES-LSSVISVLLFAAFIALSILTIGVV-YIGVTDFLQ 131
           G  LP   T L    E        + L++++++L   AF+ +   T+G++ Y+  + FLQ
Sbjct: 67  GTFLPIPGTALNFDLESFQQNNSRNELANILNLLSGGAFLEIGFFTLGILPYMNASFFLQ 126

Query: 132 -------KREREKFEKEEAATKKKKK 150
                    ER + E+EE A ++ KK
Sbjct: 127 VLTKILPSLERFQKEQEEIAQREFKK 152


>sp|Q4DW94|EFTS2_TRYCC Elongation factor Ts 2, mitochondrial OS=Trypanosoma cruzi (strain
           CL Brener) GN=Tc00.1047053506989.140 PE=3 SV=1
          Length = 278

 Score = 31.2 bits (69), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 8/68 (11%)

Query: 40  CSHTELAAKAIHFHNPCRGIAQKRSKIWRSNATS-GEVLPTESTPLETSQEMVSSTGDES 98
           CS T+ AA++  F N C   A+ +  + R    S G+VL   + P+E  + +V +T  E 
Sbjct: 89  CSETDFAARSAQFQNTC---ARVKDALQRKIIDSKGDVL---TNPMEAHRSLVEATA-ED 141

Query: 99  LSSVISVL 106
           + S I+VL
Sbjct: 142 IRSSIAVL 149


>sp|A5DNM7|TRM82_PICGU tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 OS=Meyerozyma
           guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
           JCM 1539 / NBRC 10279 / NRRL Y-324) GN=TRM82 PE=3 SV=1
          Length = 420

 Score = 30.0 bits (66), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)

Query: 90  MVSSTGDESLSSVISVLLFAAFIALSILTIGVVYIGVTDFLQKREREKFEKEEAATKKKK 149
           +  +TG    ++V +VLL     +  ++      +  +DFL+K+  EKF+KE  + ++K 
Sbjct: 9   VADTTGRYLFTTVKNVLLVIDLTSGKLVGQWKDELDNSDFLKKKYEEKFDKENDSKRQKS 68

Query: 150 -----KVKAKPRAGP 159
                KV   P  GP
Sbjct: 69  ESGQAKVSKIPTPGP 83


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.129    0.366 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,065,699
Number of Sequences: 539616
Number of extensions: 2137135
Number of successful extensions: 12048
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 12002
Number of HSP's gapped (non-prelim): 57
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)