BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035540
         (126 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9C8Y9|BGL22_ARATH Beta-glucosidase 22 OS=Arabidopsis thaliana GN=BGLU22 PE=2 SV=1
          Length = 524

 Score = 30.4 bits (67), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 7/57 (12%)

Query: 66  RKFSRFFKDDNVNKEVEVLMNSLNLHFMGNTSILEDKKKKSYTIAQYNSSYHQARHL 122
           R   ++ KD   N E+ ++ N       G    L+DK       A YN  Y+  RHL
Sbjct: 399 RSLLKYIKDKYANPEIMIMEN-------GYGDKLKDKDSVEVGTADYNRKYYLQRHL 448


>sp|P75409|CARDS_MYCPN ADP-ribosylating toxin CARDS OS=Mycoplasma pneumoniae (strain ATCC
           29342 / M129) GN=MPN_372 PE=1 SV=1
          Length = 591

 Score = 30.0 bits (66), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 42  KSPPQPNSELHLEIEKCTSHC--IAVRKFSRFFKD 74
           K+PP    EL + +++CT+H   + +R  S FF D
Sbjct: 409 KNPPSDLEELQIIVDECTTHAQFVTMRAASTFFVD 443


>sp|Q2QAV0|TIO_ARATH Serine/threonine-protein kinase TIO OS=Arabidopsis thaliana GN=TIO
           PE=1 SV=1
          Length = 1322

 Score = 29.3 bits (64), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)

Query: 56  EKCTSHCIAVRKFSRFFKDDNVN-KEVEVLMNSLNLHFMGNTSILEDKKKKSYTIAQYNS 114
           E C +  I +     FFK+D+VN   ++ L N L+ H +GN+      +K   T+ +   
Sbjct: 558 EACRAIWILIDTSETFFKNDDVNILPLDALQNRLSQHDIGNSEWGPLSEKLVDTVTR--- 614

Query: 115 SYHQARHL 122
           +Y +++H+
Sbjct: 615 AYLRSKHV 622


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.131    0.375 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,406,257
Number of Sequences: 539616
Number of extensions: 1492147
Number of successful extensions: 3641
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3637
Number of HSP's gapped (non-prelim): 17
length of query: 126
length of database: 191,569,459
effective HSP length: 92
effective length of query: 34
effective length of database: 141,924,787
effective search space: 4825442758
effective search space used: 4825442758
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)