Query 035542
Match_columns 300
No_of_seqs 161 out of 332
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 03:52:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035542.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035542hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4287 Pectin acetylesterase 100.0 4.4E-88 9.6E-93 636.5 11.4 290 9-300 20-372 (402)
2 PF03283 PAE: Pectinacetyleste 100.0 2.8E-85 6.1E-90 632.8 18.7 281 13-300 2-347 (361)
3 KOG1515 Arylacetamide deacetyl 96.6 0.011 2.4E-07 57.4 9.2 107 46-154 74-211 (336)
4 PF07859 Abhydrolase_3: alpha/ 96.3 0.011 2.4E-07 51.5 6.8 69 64-133 1-95 (211)
5 PF10340 DUF2424: Protein of u 96.2 0.023 5.1E-07 56.0 9.2 81 49-132 107-218 (374)
6 PRK10162 acetyl esterase; Prov 96.2 0.017 3.7E-07 54.9 8.0 88 44-133 66-178 (318)
7 PF00326 Peptidase_S9: Prolyl 94.8 0.051 1.1E-06 47.8 5.2 109 89-215 45-156 (213)
8 COG0657 Aes Esterase/lipase [L 94.7 0.21 4.6E-06 46.8 9.4 85 49-133 66-176 (312)
9 COG1506 DAP2 Dipeptidyl aminop 94.3 0.085 1.8E-06 55.0 6.1 110 89-215 454-563 (620)
10 cd00312 Esterase_lipase Estera 94.0 0.11 2.4E-06 51.7 6.2 68 61-128 95-195 (493)
11 PF05677 DUF818: Chlamydia CHL 93.7 0.17 3.6E-06 49.6 6.5 89 59-148 135-254 (365)
12 PRK10566 esterase; Provisional 93.4 0.37 8.1E-06 42.9 7.9 52 93-149 92-143 (249)
13 PRK10115 protease 2; Provision 92.8 0.33 7.1E-06 51.4 7.7 113 89-215 505-618 (686)
14 PRK05077 frsA fermentation/res 92.7 1.4 3.1E-05 43.7 11.5 35 90-125 247-281 (414)
15 PF01764 Lipase_3: Lipase (cla 92.3 0.4 8.8E-06 39.1 6.0 40 108-147 63-103 (140)
16 PF12242 Eno-Rase_NADH_b: NAD( 91.1 0.79 1.7E-05 35.6 6.0 47 89-140 20-67 (78)
17 KOG4627 Kynurenine formamidase 90.5 0.8 1.7E-05 42.4 6.5 66 58-125 64-152 (270)
18 PF00135 COesterase: Carboxyle 86.2 2.5 5.4E-05 41.9 7.5 98 32-129 76-228 (535)
19 PRK13604 luxD acyl transferase 86.2 2.5 5.4E-05 40.8 7.1 51 87-149 90-141 (307)
20 PF12695 Abhydrolase_5: Alpha/ 84.4 1.7 3.7E-05 34.8 4.5 40 87-128 41-80 (145)
21 TIGR03712 acc_sec_asp2 accesso 83.5 1.4 2.9E-05 45.1 4.2 83 45-131 275-379 (511)
22 TIGR01840 esterase_phb esteras 81.0 2.1 4.6E-05 37.7 4.1 37 90-127 77-113 (212)
23 PF00756 Esterase: Putative es 78.8 1.9 4.1E-05 38.5 3.1 38 90-129 97-135 (251)
24 cd00519 Lipase_3 Lipase (class 78.5 6.4 0.00014 35.2 6.4 39 108-147 127-165 (229)
25 cd07220 Pat_PNPLA2 Patatin-lik 78.4 2.1 4.5E-05 39.9 3.3 49 61-125 3-52 (249)
26 COG4814 Uncharacterized protei 77.9 2.9 6.4E-05 39.6 4.1 45 89-136 119-165 (288)
27 TIGR03100 hydr1_PEP hydrolase, 77.3 9.4 0.0002 35.2 7.3 36 90-127 83-118 (274)
28 KOG4569 Predicted lipase [Lipi 76.6 6 0.00013 38.3 6.0 68 92-168 157-225 (336)
29 COG1770 PtrB Protease II [Amin 75.7 3.5 7.5E-05 43.7 4.3 39 87-126 506-546 (682)
30 cd00707 Pancreat_lipase_like P 74.8 7.6 0.00016 36.3 6.0 57 92-152 96-152 (275)
31 PLN02408 phospholipase A1 74.6 18 0.00038 35.9 8.7 53 109-167 200-252 (365)
32 PF03583 LIP: Secretory lipase 73.5 7 0.00015 36.9 5.5 48 104-152 66-115 (290)
33 COG2272 PnbA Carboxylesterase 72.9 7.2 0.00016 40.0 5.7 37 87-123 156-194 (491)
34 KOG1552 Predicted alpha/beta h 72.1 5.8 0.00013 37.5 4.5 92 89-215 112-204 (258)
35 PRK10439 enterobactin/ferric e 72.1 5.1 0.00011 39.9 4.4 36 92-127 266-306 (411)
36 TIGR02821 fghA_ester_D S-formy 71.9 4.4 9.6E-05 37.4 3.7 23 107-129 136-158 (275)
37 cd00741 Lipase Lipase. Lipase 70.8 12 0.00027 31.1 5.9 44 89-134 8-53 (153)
38 cd07207 Pat_ExoU_VipD_like Exo 70.8 7.5 0.00016 33.6 4.7 28 94-125 16-43 (194)
39 PRK14875 acetoin dehydrogenase 69.7 31 0.00066 32.4 9.0 18 198-215 309-326 (371)
40 PLN02442 S-formylglutathione h 69.6 4.1 8.9E-05 38.0 2.9 22 107-128 141-162 (283)
41 PRK10349 carboxylesterase BioH 69.6 12 0.00027 33.2 6.0 49 91-147 60-108 (256)
42 TIGR00976 /NonD putative hydro 69.2 12 0.00026 38.3 6.5 36 89-126 79-114 (550)
43 KOG2237 Predicted serine prote 69.2 13 0.00028 39.5 6.6 93 24-121 451-561 (712)
44 PLN02802 triacylglycerol lipas 68.9 15 0.00032 38.0 6.9 51 109-165 330-380 (509)
45 KOG1209 1-Acyl dihydroxyaceton 68.7 13 0.00029 34.8 5.9 66 105-170 4-76 (289)
46 PF00975 Thioesterase: Thioest 68.0 17 0.00036 31.8 6.3 52 91-146 51-102 (229)
47 PF02230 Abhydrolase_2: Phosph 66.8 9.2 0.0002 33.8 4.5 35 91-127 89-123 (216)
48 PLN02454 triacylglycerol lipas 66.4 18 0.0004 36.4 6.9 64 96-167 216-282 (414)
49 PF10503 Esterase_phd: Esteras 66.0 8 0.00017 35.4 4.0 43 89-136 78-120 (220)
50 COG4099 Predicted peptidase [G 65.9 20 0.00044 35.0 6.8 87 47-134 175-294 (387)
51 PLN00021 chlorophyllase 65.1 28 0.00061 33.3 7.8 72 59-130 50-147 (313)
52 cd07224 Pat_like Patatin-like 64.6 7.3 0.00016 35.6 3.5 31 95-127 17-47 (233)
53 cd07205 Pat_PNPLA6_PNPLA7_NTE1 64.6 14 0.0003 31.7 5.0 32 92-127 15-46 (175)
54 cd01819 Patatin_and_cPLA2 Pata 64.1 10 0.00022 32.3 4.1 34 92-127 13-46 (155)
55 PLN03037 lipase class 3 family 61.9 24 0.00051 36.6 6.8 55 107-167 316-370 (525)
56 cd07208 Pat_hypo_Ecoli_yjju_li 61.9 11 0.00024 34.6 4.3 30 93-125 14-43 (266)
57 cd07198 Patatin Patatin-like p 61.3 9.2 0.0002 32.8 3.3 30 94-127 15-44 (172)
58 PF12740 Chlorophyllase2: Chlo 61.1 14 0.00031 34.8 4.8 42 89-130 64-112 (259)
59 PRK10673 acyl-CoA esterase; Pr 60.9 45 0.00098 29.2 7.8 36 108-147 80-115 (255)
60 PHA02857 monoglyceride lipase; 60.9 51 0.0011 29.5 8.3 20 197-216 203-222 (276)
61 KOG1553 Predicted alpha/beta h 60.6 42 0.0009 33.6 7.9 101 60-170 242-364 (517)
62 PF05448 AXE1: Acetyl xylan es 60.0 17 0.00036 35.1 5.2 116 83-215 149-274 (320)
63 cd07213 Pat17_PNPLA8_PNPLA9_li 59.7 18 0.00039 33.9 5.3 45 64-125 4-50 (288)
64 TIGR03230 lipo_lipase lipoprot 58.8 22 0.00048 36.0 6.0 55 92-151 103-158 (442)
65 PF08840 BAAT_C: BAAT / Acyl-C 58.6 25 0.00054 31.5 5.8 55 91-150 5-59 (213)
66 PF07819 PGAP1: PGAP1-like pro 58.3 14 0.0003 33.6 4.1 34 91-124 65-100 (225)
67 PF03575 Peptidase_S51: Peptid 58.0 6.6 0.00014 33.3 1.8 10 111-120 70-79 (154)
68 PF05728 UPF0227: Uncharacteri 56.5 23 0.00049 31.6 5.1 35 94-135 47-81 (187)
69 TIGR01250 pro_imino_pep_2 prol 56.3 83 0.0018 27.2 8.7 19 197-215 225-243 (288)
70 PLN02298 hydrolase, alpha/beta 55.9 33 0.00071 32.0 6.3 50 91-145 117-166 (330)
71 PRK00870 haloalkane dehalogena 55.8 1.1E+02 0.0023 28.1 9.7 37 108-148 114-150 (302)
72 PF12697 Abhydrolase_6: Alpha/ 54.8 42 0.00092 27.6 6.3 38 109-150 66-103 (228)
73 PLN02211 methyl indole-3-aceta 54.2 34 0.00075 31.4 6.1 24 105-128 83-106 (273)
74 PF06028 DUF915: Alpha/beta hy 54.1 33 0.00072 32.1 6.0 63 85-152 82-146 (255)
75 TIGR03611 RutD pyrimidine util 53.2 27 0.00059 29.9 5.0 20 108-127 79-98 (257)
76 cd07222 Pat_PNPLA4 Patatin-lik 52.6 14 0.0003 34.1 3.2 31 95-126 17-48 (246)
77 cd07204 Pat_PNPLA_like Patatin 52.4 15 0.00033 33.8 3.4 31 95-126 17-48 (243)
78 cd07223 Pat_PNPLA5-mammals Pat 52.3 13 0.00028 37.3 3.0 53 60-127 7-59 (405)
79 cd07221 Pat_PNPLA3 Patatin-lik 52.1 23 0.00051 32.9 4.6 32 95-127 18-50 (252)
80 cd07218 Pat_iPLA2 Calcium-inde 51.7 16 0.00036 33.8 3.5 30 95-126 18-47 (245)
81 PF02129 Peptidase_S15: X-Pro 50.5 34 0.00074 31.4 5.4 38 88-127 82-119 (272)
82 cd07225 Pat_PNPLA6_PNPLA7 Pata 50.0 32 0.00069 33.0 5.3 48 61-127 14-61 (306)
83 PRK05371 x-prolyl-dipeptidyl a 49.8 52 0.0011 35.6 7.4 29 188-216 440-468 (767)
84 PF01738 DLH: Dienelactone hyd 49.0 27 0.00057 30.7 4.3 35 90-125 80-114 (218)
85 PLN02324 triacylglycerol lipas 48.8 52 0.0011 33.3 6.7 34 97-132 204-238 (415)
86 COG0627 Predicted esterase [Ge 48.4 46 0.00099 32.2 6.1 110 26-149 53-187 (316)
87 TIGR03695 menH_SHCHC 2-succiny 48.3 34 0.00074 28.6 4.7 23 107-129 68-90 (251)
88 cd07216 Pat17_PNPLA8_PNPLA9_li 47.7 31 0.00068 32.6 4.8 14 112-125 45-58 (309)
89 KOG1282 Serine carboxypeptidas 47.6 1.4E+02 0.003 30.5 9.6 103 45-150 56-213 (454)
90 PLN02310 triacylglycerol lipas 46.7 60 0.0013 32.7 6.8 52 108-166 208-259 (405)
91 PRK11460 putative hydrolase; P 46.5 28 0.00062 31.3 4.2 32 93-125 88-119 (232)
92 COG3509 LpqC Poly(3-hydroxybut 46.1 25 0.00053 34.1 3.8 30 91-121 127-156 (312)
93 PF00151 Lipase: Lipase; Inte 46.0 45 0.00097 32.3 5.7 55 95-153 137-193 (331)
94 PF08237 PE-PPE: PE-PPE domain 45.9 69 0.0015 29.4 6.6 55 87-146 31-88 (225)
95 PTZ00472 serine carboxypeptida 45.2 1.9E+02 0.0041 29.3 10.2 37 108-144 170-210 (462)
96 cd07232 Pat_PLPL Patain-like p 45.0 39 0.00085 33.8 5.2 48 62-128 67-114 (407)
97 cd07219 Pat_PNPLA1 Patatin-lik 44.7 44 0.00095 33.4 5.4 51 60-126 10-61 (382)
98 TIGR03101 hydr2_PEP hydrolase, 43.9 50 0.0011 31.0 5.5 30 93-126 87-116 (266)
99 TIGR03056 bchO_mg_che_rel puta 43.0 55 0.0012 28.7 5.4 35 108-146 94-128 (278)
100 PF12715 Abhydrolase_7: Abhydr 42.9 58 0.0013 32.6 5.9 47 95-149 213-259 (390)
101 TIGR01738 bioH putative pimelo 42.7 47 0.001 27.9 4.8 50 91-148 51-100 (245)
102 PLN02965 Probable pheophorbida 42.4 73 0.0016 28.4 6.2 34 109-146 72-105 (255)
103 PF03403 PAF-AH_p_II: Platelet 42.3 21 0.00045 35.3 2.8 17 108-124 227-243 (379)
104 PF00561 Abhydrolase_1: alpha/ 41.9 46 0.001 28.1 4.6 38 89-129 27-64 (230)
105 PRK05282 (alpha)-aspartyl dipe 41.3 24 0.00052 32.7 2.9 12 110-121 113-124 (233)
106 KOG1516 Carboxylesterase and r 41.0 39 0.00084 34.2 4.6 33 92-125 176-211 (545)
107 COG0412 Dienelactone hydrolase 39.3 43 0.00094 30.6 4.2 39 90-129 94-132 (236)
108 PLN02733 phosphatidylcholine-s 39.1 47 0.001 33.6 4.8 34 91-127 147-180 (440)
109 PLN02571 triacylglycerol lipas 38.9 57 0.0012 32.9 5.2 23 110-132 227-249 (413)
110 PF01734 Patatin: Patatin-like 37.3 24 0.00052 28.9 2.1 16 111-126 29-44 (204)
111 PF06500 DUF1100: Alpha/beta h 36.7 37 0.00079 34.3 3.5 34 89-123 242-275 (411)
112 PLN02894 hydrolase, alpha/beta 36.6 91 0.002 30.6 6.3 40 108-151 175-215 (402)
113 PF06821 Ser_hydrolase: Serine 36.4 1.1E+02 0.0024 26.6 6.1 36 89-128 39-74 (171)
114 PF05057 DUF676: Putative seri 35.9 31 0.00068 30.9 2.7 41 83-125 54-94 (217)
115 COG3007 Uncharacterized paraqu 35.8 88 0.0019 30.7 5.7 60 89-158 21-82 (398)
116 PF05577 Peptidase_S28: Serine 35.6 74 0.0016 31.4 5.5 42 107-154 111-153 (434)
117 PLN00413 triacylglycerol lipas 34.8 63 0.0014 33.2 4.9 25 108-132 283-307 (479)
118 KOG2984 Predicted hydrolase [G 34.1 12 0.00025 34.9 -0.4 20 196-215 209-228 (277)
119 PF01083 Cutinase: Cutinase; 34.0 1.3E+02 0.0029 26.2 6.3 38 86-126 61-98 (179)
120 TIGR02427 protocat_pcaD 3-oxoa 33.8 45 0.00098 28.1 3.2 19 198-216 188-206 (251)
121 PRK15231 fimbrial adhesin prot 33.7 47 0.001 28.9 3.2 41 45-88 78-118 (150)
122 TIGR01392 homoserO_Ac_trn homo 33.3 93 0.002 29.5 5.6 50 93-149 113-163 (351)
123 cd07215 Pat17_PNPLA8_PNPLA9_li 33.2 71 0.0015 30.6 4.8 13 112-124 43-55 (329)
124 PLN02719 triacylglycerol lipas 32.9 81 0.0018 32.8 5.3 26 108-133 297-322 (518)
125 cd07230 Pat_TGL4-5_like Triacy 32.8 49 0.0011 33.3 3.7 47 62-127 73-119 (421)
126 cd07228 Pat_NTE_like_bacteria 32.6 59 0.0013 27.9 3.8 25 95-123 18-42 (175)
127 PLN02824 hydrolase, alpha/beta 32.4 1.2E+02 0.0026 27.5 6.0 21 196-216 227-247 (294)
128 TIGR01249 pro_imino_pep_1 prol 32.3 1.9E+02 0.0041 26.7 7.4 33 93-128 82-114 (306)
129 TIGR03739 PRTRC_D PRTRC system 32.3 85 0.0018 29.8 5.2 34 106-145 272-305 (320)
130 PRK10749 lysophospholipase L2; 32.3 1.4E+02 0.003 28.1 6.6 21 108-128 130-150 (330)
131 cd03146 GAT1_Peptidase_E Type 32.2 42 0.0009 30.1 2.9 39 83-123 83-127 (212)
132 PLN02753 triacylglycerol lipas 31.2 89 0.0019 32.6 5.3 53 108-166 311-369 (531)
133 cd03129 GAT1_Peptidase_E_like 30.8 43 0.00092 29.7 2.7 17 109-125 113-129 (210)
134 PLN02162 triacylglycerol lipas 30.7 95 0.0021 32.0 5.4 25 108-132 277-301 (475)
135 TIGR01836 PHA_synth_III_C poly 30.3 54 0.0012 31.2 3.5 33 91-126 121-153 (350)
136 PLN02934 triacylglycerol lipas 30.3 89 0.0019 32.5 5.1 37 92-131 307-343 (515)
137 PRK04940 hypothetical protein; 30.2 92 0.002 27.8 4.6 23 109-135 60-82 (180)
138 PLN02872 triacylglycerol lipas 29.6 72 0.0016 31.6 4.3 34 87-124 142-175 (395)
139 cd07210 Pat_hypo_W_succinogene 29.4 63 0.0014 29.2 3.6 30 94-127 17-46 (221)
140 COG0031 CysK Cysteine synthase 29.2 70 0.0015 30.9 4.0 37 110-148 258-295 (300)
141 PF06057 VirJ: Bacterial virul 28.7 66 0.0014 29.2 3.5 26 92-120 54-79 (192)
142 COG1752 RssA Predicted esteras 28.2 63 0.0014 30.5 3.5 49 60-127 9-57 (306)
143 PF00091 Tubulin: Tubulin/FtsZ 28.1 1.5E+02 0.0032 26.5 5.7 49 89-137 104-156 (216)
144 PRK13917 plasmid segregation p 27.0 1.2E+02 0.0026 29.3 5.3 27 105-136 289-315 (344)
145 COG4667 Predicted esterase of 26.9 87 0.0019 30.1 4.0 68 61-149 10-79 (292)
146 COG2939 Carboxypeptidase C (ca 26.8 2.8E+02 0.006 28.8 7.9 57 89-147 180-240 (498)
147 COG3458 Acetyl esterase (deace 26.2 1.5E+02 0.0032 28.9 5.4 118 81-215 148-271 (321)
148 TIGR02240 PHA_depoly_arom poly 26.2 94 0.002 28.0 4.1 20 197-216 201-220 (276)
149 KOG2564 Predicted acetyltransf 26.1 1.1E+02 0.0023 29.9 4.5 39 92-136 133-171 (343)
150 KOG3101 Esterase D [General fu 25.9 28 0.00061 32.6 0.6 37 89-125 117-157 (283)
151 cd07209 Pat_hypo_Ecoli_Z1214_l 25.9 73 0.0016 28.5 3.3 27 95-125 16-42 (215)
152 PRK11071 esterase YqiA; Provis 25.8 1.1E+02 0.0024 26.7 4.3 33 91-126 46-78 (190)
153 PF00086 Thyroglobulin_1: Thyr 25.7 87 0.0019 23.0 3.2 29 249-277 5-33 (68)
154 PRK10985 putative hydrolase; P 25.7 1E+02 0.0022 29.0 4.3 32 90-124 115-146 (324)
155 cd03145 GAT1_cyanophycinase Ty 25.5 45 0.00097 30.1 1.9 14 109-122 116-129 (217)
156 PRK11126 2-succinyl-6-hydroxy- 24.7 87 0.0019 27.1 3.5 18 198-215 183-200 (242)
157 smart00824 PKS_TE Thioesterase 24.7 2.9E+02 0.0063 22.7 6.6 38 108-146 63-100 (212)
158 PRK10279 hypothetical protein; 24.4 78 0.0017 30.3 3.4 48 61-127 4-51 (300)
159 KOG4388 Hormone-sensitive lipa 23.9 1.2E+02 0.0026 32.4 4.7 68 60-127 395-490 (880)
160 KOG3724 Negative regulator of 23.4 1.5E+02 0.0032 32.7 5.4 64 105-174 178-244 (973)
161 cd07206 Pat_TGL3-4-5_SDP1 Tria 23.4 95 0.0021 30.0 3.7 47 62-127 69-115 (298)
162 PRK03204 haloalkane dehalogena 23.3 1.5E+02 0.0033 27.1 5.0 52 90-148 85-136 (286)
163 COG1505 Serine proteases of th 23.2 1.2E+02 0.0026 32.3 4.6 82 39-121 398-512 (648)
164 PF08538 DUF1749: Protein of u 22.8 1.4E+02 0.0029 29.0 4.6 46 87-132 85-131 (303)
165 COG0596 MhpC Predicted hydrola 22.7 1.2E+02 0.0026 24.8 3.8 33 94-129 76-108 (282)
166 PF11288 DUF3089: Protein of u 22.6 1.1E+02 0.0024 27.9 3.9 34 88-123 76-109 (207)
167 KOG4389 Acetylcholinesterase/B 22.5 1.5E+02 0.0032 31.1 5.0 119 61-185 135-294 (601)
168 PLN02578 hydrolase 22.3 2.4E+02 0.0052 26.8 6.3 19 197-215 290-308 (354)
169 COG1075 LipA Predicted acetylt 22.3 1.6E+02 0.0034 28.4 5.1 45 83-135 105-149 (336)
170 PF02450 LCAT: Lecithin:choles 22.3 1.1E+02 0.0024 30.2 4.0 37 90-130 104-140 (389)
171 PF00450 Peptidase_S10: Serine 22.1 3.3E+02 0.0071 26.0 7.2 39 107-145 134-176 (415)
172 KOG4391 Predicted alpha/beta h 22.1 33 0.00071 32.3 0.3 42 90-132 131-172 (300)
173 COG5153 CVT17 Putative lipase 21.9 91 0.002 30.5 3.2 13 108-120 275-287 (425)
174 KOG4540 Putative lipase essent 21.9 91 0.002 30.5 3.2 13 108-120 275-287 (425)
175 PLN02761 lipase class 3 family 21.6 1.9E+02 0.004 30.3 5.6 24 109-132 294-317 (527)
176 PRK03592 haloalkane dehalogena 21.5 2.8E+02 0.0062 25.0 6.4 34 109-146 93-126 (295)
177 cd07231 Pat_SDP1-like Sugar-De 21.5 1.1E+02 0.0024 29.9 3.7 47 62-127 68-114 (323)
178 PRK15451 tRNA cmo(5)U34 methyl 21.4 2.5E+02 0.0054 25.5 6.0 70 70-145 16-90 (247)
179 PF04260 DUF436: Protein of un 21.4 89 0.0019 27.9 2.8 26 92-118 3-28 (172)
180 PLN02847 triacylglycerol lipas 21.1 2E+02 0.0043 30.7 5.7 23 109-132 251-274 (633)
181 COG3340 PepE Peptidase E [Amin 21.0 73 0.0016 29.6 2.3 30 91-121 94-129 (224)
182 KOG1454 Predicted hydrolase/ac 20.7 3.3E+02 0.0071 26.2 6.9 69 65-145 92-160 (326)
183 cd07387 MPP_PolD2_C PolD2 (DNA 20.6 2.2E+02 0.0047 26.8 5.4 33 90-122 18-57 (257)
184 PRK12462 phosphoserine aminotr 20.5 2.6E+02 0.0055 27.7 6.2 62 83-149 39-104 (364)
185 COG0400 Predicted esterase [Ge 20.4 98 0.0021 28.1 3.0 28 92-120 83-110 (207)
186 PF09949 DUF2183: Uncharacteri 20.1 3.8E+02 0.0082 21.5 6.1 58 88-147 8-74 (100)
No 1
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=4.4e-88 Score=636.48 Aligned_cols=290 Identities=50% Similarity=0.978 Sum_probs=276.7
Q ss_pred HHHHHHHHHHHHHhcCCccceEEeecCCCCCCcccCCCCCceeeecCCCCCCccEEEEecccceeCCccccc--------
Q 035542 9 WFSLLVCALMFLKAQGFSVPITYVENGVVEGAVCLDCSPPTYHFDKGFGAGINNWLVFVEGGGWCNDVTTCH-------- 80 (300)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~v~ltll~~a~~~ga~ClDGSp~~yy~~~g~g~gs~~wli~leGGG~C~~~~~C~-------- 80 (300)
|...++...+.+......|+||+|+.|..+||+|||||+||||+++|+|+|+++|||++||||||.+..+|.
T Consensus 20 ~s~~lv~~~~~~~s~~~~v~ltli~~A~akGAvClDGSlpgYhl~~g~GSg~n~wliqlegGgwC~~i~sCv~Rk~tr~G 99 (402)
T KOG4287|consen 20 WSIPLVFGSLVIGSPGLMVPLTLIRGAAAKGAVCLDGSLPGYHLHRGSGSGANNWLIQLEGGGWCNNIRSCVYRKMTRLG 99 (402)
T ss_pred hhhhhhhhhhcccCccccchhHHHhhHhhcCceecCCCCcceeeccCCCccccceeEecccccccccchhHHHHhhcccc
Confidence 444455544445556689999999999999999999999999999999999999999999999999999998
Q ss_pred -------------------------------------------------ccccccchHHHHHHHHHHHhhccCCCCCCeE
Q 035542 81 -------------------------------------------------GTNLHFREARVFLAVMKDLLTVKGMINAQNA 111 (300)
Q Consensus 81 -------------------------------------------------~~~l~frG~~i~~avl~~l~~~~gl~~a~~v 111 (300)
.+.++|||.+||+|||++|+. +||.+|++.
T Consensus 100 SS~~mek~~~FtGILS~k~~eNPdF~NWNrVkvRYCDGasFsGd~e~~~~t~l~fRG~rIw~av~~eLl~-kGms~Ak~a 178 (402)
T KOG4287|consen 100 SSNYMEKELAFTGILSNKPSENPDFYNWNRVKVRYCDGASFSGDSENKNATQLQFRGARIWLAVMDELLA-KGMSNAKQA 178 (402)
T ss_pred ccccchhhcceeEEecCCcccCCcccccceeEEeecCCCcccCcccccchhhhhhhHHHHHHHHHHHHHH-hhhhHHHHH
Confidence 348999999999999999999 899999999
Q ss_pred EEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccccccCCCCchhHHHHHHHHHHHhhccCccCCcccccccCCCCc
Q 035542 112 ILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFINVKDISDASHIEEFFAQVVATHGSIKHLPASCTKRLNPAGL 191 (300)
Q Consensus 112 ilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~~~~~l~~~~~~lp~~C~~~~~~~w~ 191 (300)
||+||||||+|+++|+|+||+.||++++|||++|+|||||.+|+.|...++.+|.++|++||+.++||+.|+++.+|+ +
T Consensus 179 lLsGcSAGGLa~iLhCD~Fr~~lp~~t~VKClSDaG~FLd~~dv~g~~t~~~~~~~vv~lqg~~k~Lp~~Ct~~~~p~-~ 257 (402)
T KOG4287|consen 179 LLSGCSAGGLASILHCDEFRELLPPTTKVKCLSDAGFFLDAKDVSGGPTLRSYYAGVVTLQGLQKNLPQSCTSHLEPS-L 257 (402)
T ss_pred HhhcCCccchhheeehHHHHhhCCCCceeEEecccceeeecccccCCcchhhhhhhheeeecccccCCHHHHhcCCch-h
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999777 9
Q ss_pred CcchhhhhhcCCCceEEeechhhHHHHhhhccCCCCCCCccccccc-CccCCCHHHHH-----HHHHHHHHhhccCCCCc
Q 035542 192 CFFPQYVAGQVITPLFIINSAYDRWQISHILVPDDADPNSSWESCK-NMLTLSAANFA-----RVQFLNALAGLGNSSSR 265 (300)
Q Consensus 192 C~f~~~~~~~i~tP~Fi~~s~YD~wQl~nil~~~~~~~~~~W~~C~-~~~~C~~~q~~-----r~~~l~~l~~~~~~~~~ 265 (300)
||||||+++.|+||+||+|++||+|||++.++|+++|+.+.|.+|+ +...|++.|++ |.+||.++..+.++...
T Consensus 258 CfFpq~v~~~irtP~F~vN~afD~wQi~~~laP~s~d~~g~w~~ckl~~~~c~~~q~~~~qgFr~~ml~a~~~f~~~~~~ 337 (402)
T KOG4287|consen 258 CFFPQYVLKTIRTPVFLVNAAFDSWQIQNSLAPTSADPSGSWKYCKLNHRECTAAQIDFLQGFRPQMLDAVKIFSSSKQN 337 (402)
T ss_pred hcchHHHHhhcCCceEehhhhhhHHhccCCCCCCCCCcccchhhcccccccCCHHHHHHHHHHHHHHHHHhhhheecccC
Confidence 9999999999999999999999999999999999999999999999 99999999999 99999999999888999
Q ss_pred eeeeccchhcccccccCcccCCCccccCCeecccC
Q 035542 266 GMFIDSCYIHCQTVYQETWLRADSPVLDKTSIAKA 300 (300)
Q Consensus 266 G~Fi~SC~~Hc~~~~~~~W~~~~~p~~~~~tia~a 300 (300)
|+||+||++|||+++++||+++++|.++|||||||
T Consensus 338 g~finsc~aHCq~~~~~tW~~~~sp~i~~k~iA~a 372 (402)
T KOG4287|consen 338 GLFINSCFAHCQTERQDTWFADDSPAIKNKTIAEA 372 (402)
T ss_pred CeeechHHHhhcccccccccCCCCccccCchhhhh
Confidence 99999999999999999999999999999999986
No 2
>PF03283 PAE: Pectinacetylesterase
Probab=100.00 E-value=2.8e-85 Score=632.82 Aligned_cols=281 Identities=46% Similarity=0.895 Sum_probs=268.7
Q ss_pred HHHHHHHHHhcCCccceEEeecCCCCCCcccCCCCCceeeecCCCCCCccEEEEecccceeCCccccc------------
Q 035542 13 LVCALMFLKAQGFSVPITYVENGVVEGAVCLDCSPPTYHFDKGFGAGINNWLVFVEGGGWCNDVTTCH------------ 80 (300)
Q Consensus 13 ~~~~~~~~~~~~~~v~ltll~~a~~~ga~ClDGSp~~yy~~~g~g~gs~~wli~leGGG~C~~~~~C~------------ 80 (300)
|+|+++...++...|+||+|++|++++|+|+|||||+||+|+|+|++++||||||||||||||.++|.
T Consensus 2 ~~~~~~~~~~~~~~~~l~~l~~~~~~~a~C~DGS~~~yy~~~g~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~ 81 (361)
T PF03283_consen 2 LICLLVASNAQSDEVKLTLLDDAVDTGAVCLDGSPPGYYFRPGSGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKN 81 (361)
T ss_pred eEEEeeeccccccccceEEecCCCCCCCCcCCCCCCcEEEccCCCCCCceEEEEeccchhcCChhHHhhhccCccccccc
Confidence 45555666668899999999999999999999999999999999999999999999999999999997
Q ss_pred -----------------------------------------------ccccccchHHHHHHHHHHHhhccCCCCCCeEEE
Q 035542 81 -----------------------------------------------GTNLHFREARVFLAVMKDLLTVKGMINAQNAIL 113 (300)
Q Consensus 81 -----------------------------------------------~~~l~frG~~i~~avl~~l~~~~gl~~a~~vil 113 (300)
+.++||||++|++|||++|++ +||++|++|||
T Consensus 82 ~~~~~~~~Gils~~~~~Np~f~~wN~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~-~gl~~a~~vll 160 (361)
T PF03283_consen 82 WPKTFAFSGILSNDPAENPDFYNWNHVFVPYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLS-NGLPNAKQVLL 160 (361)
T ss_pred hhhhccccccccCCcccCCccccccEEEEEecCCccccCcccccccCCceeEeecHHHHHHHHHHHHH-hcCcccceEEE
Confidence 457999999999999999999 59999999999
Q ss_pred eecChhHHHHHHhHHHHHhhCCCccEEEEeeccccccccCCCCchhHHHHHHHHHHHhhccCccCCcccccccCCCCcCc
Q 035542 114 SGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFINVKDISDASHIEEFFAQVVATHGSIKHLPASCTKRLNPAGLCF 193 (300)
Q Consensus 114 sG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~~~~~l~~~~~~lp~~C~~~~~~~w~C~ 193 (300)
+||||||+||++|+|+||++||+.++|++++|||||+|.++++|.+.++.++..++.+|+..+.+|++|.+.+++. ||
T Consensus 161 tG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~~~~~~--C~ 238 (361)
T PF03283_consen 161 TGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQNWSKSLPESCVAQYDPE--CF 238 (361)
T ss_pred eccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHHhhccCCHhHHhccCcc--cc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988777 99
Q ss_pred chhhhhhcCCCceEEeechhhHHHHhhhccCCCCCCCccccccc-CccCCCHHHHH-----HHHHHHHHhhccCCCCcee
Q 035542 194 FPQYVAGQVITPLFIINSAYDRWQISHILVPDDADPNSSWESCK-NMLTLSAANFA-----RVQFLNALAGLGNSSSRGM 267 (300)
Q Consensus 194 f~~~~~~~i~tP~Fi~~s~YD~wQl~nil~~~~~~~~~~W~~C~-~~~~C~~~q~~-----r~~~l~~l~~~~~~~~~G~ 267 (300)
||||++|+|+||+||+||+||+|||+|++.|.. +.|.+|+ ++..|+++|++ |++|+++|+++.+++++|+
T Consensus 239 f~q~~~~~I~tPlFivns~YD~wQl~~il~p~~----~~w~~c~~~~~~Cs~~Ql~~lq~fr~~~~~aL~~~~~~~~~G~ 314 (361)
T PF03283_consen 239 FPQYLYPYIKTPLFIVNSLYDSWQLQNILVPPS----GSWISCKNDLPPCSPSQLDYLQGFRSEMLDALKNVSNSPNWGV 314 (361)
T ss_pred chHHHHhhcCcceeeehhhhCHHHhhcccCCCc----ccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCeE
Confidence 999999999999999999999999999999954 9999999 99999999998 9999999999999999999
Q ss_pred eeccchhcccccccCcccCCCccccCCeecccC
Q 035542 268 FIDSCYIHCQTVYQETWLRADSPVLDKTSIAKA 300 (300)
Q Consensus 268 Fi~SC~~Hc~~~~~~~W~~~~~p~~~~~tia~a 300 (300)
||+||++|||++.+++|+++.+|+++|+||+||
T Consensus 315 Fi~SC~~Hcq~~~~~~W~~~~~p~v~g~tia~A 347 (361)
T PF03283_consen 315 FIPSCFAHCQSESSDTWNSPDSPRVNGKTIAEA 347 (361)
T ss_pred ECccchhhcccccCCcccCCCcccCCCEEHHHH
Confidence 999999999999999999999999999999986
No 3
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.60 E-value=0.011 Score=57.44 Aligned_cols=107 Identities=18% Similarity=0.105 Sum_probs=60.4
Q ss_pred CCCceeeecCCCC-CCccEEEEecccceeCCc--cccc--------------cc-------------ccccchHHHHHHH
Q 035542 46 SPPTYHFDKGFGA-GINNWLVFVEGGGWCNDV--TTCH--------------GT-------------NLHFREARVFLAV 95 (300)
Q Consensus 46 Sp~~yy~~~g~g~-gs~~wli~leGGG~C~~~--~~C~--------------~~-------------~l~frG~~i~~av 95 (300)
.+-.-|.-....+ .....||||=|||||..- ..|+ -. .-|.-|-.-++-+
T Consensus 74 l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~ 153 (336)
T KOG1515|consen 74 LPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWV 153 (336)
T ss_pred eEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHH
Confidence 3444455444433 457899999999999873 2233 01 1222344444444
Q ss_pred HHH-HhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccccccCC
Q 035542 96 MKD-LLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFINVKD 154 (300)
Q Consensus 96 l~~-l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~ 154 (300)
++. +.. ---+.++|+|+|.||||--|..-+.++++--+...++++..=--.|+...+
T Consensus 154 ~~~~~~~--~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 154 LKNSWLK--LGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred HHhHHHH--hCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 442 222 245678899999999997776666666653122234544443334444433
No 4
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=96.33 E-value=0.011 Score=51.51 Aligned_cols=69 Identities=23% Similarity=0.331 Sum_probs=42.6
Q ss_pred EEEecccceeCCccc-cc----------------------ccccccchHHHHHHHHHHHhhc---cCCCCCCeEEEeecC
Q 035542 64 LVFVEGGGWCNDVTT-CH----------------------GTNLHFREARVFLAVMKDLLTV---KGMINAQNAILSGCS 117 (300)
Q Consensus 64 li~leGGG~C~~~~~-C~----------------------~~~l~frG~~i~~avl~~l~~~---~gl~~a~~vilsG~S 117 (300)
|||+=||||+..... .. ...-+---..-..++++++.++ .++ ++++|+|+|.|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~-d~~~i~l~G~S 79 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGI-DPERIVLIGDS 79 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTE-EEEEEEEEEET
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccccc-cccceEEeecc
Confidence 689999999976322 11 1111112244556677777773 233 48899999999
Q ss_pred hhHHHHHHhHHHHHhh
Q 035542 118 AGGFASILYCDNFRAL 133 (300)
Q Consensus 118 AGG~g~~~~~d~v~~~ 133 (300)
|||.=++.-+-..++.
T Consensus 80 AGg~la~~~~~~~~~~ 95 (211)
T PF07859_consen 80 AGGHLALSLALRARDR 95 (211)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred cccchhhhhhhhhhhh
Confidence 9996666666666654
No 5
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.25 E-value=0.023 Score=55.99 Aligned_cols=81 Identities=23% Similarity=0.373 Sum_probs=54.1
Q ss_pred ceeeecC-C--CCCCccEEEEecccceeCCccccc-------------------cccccc---ch------HHHHHHHHH
Q 035542 49 TYHFDKG-F--GAGINNWLVFVEGGGWCNDVTTCH-------------------GTNLHF---RE------ARVFLAVMK 97 (300)
Q Consensus 49 ~yy~~~g-~--g~gs~~wli~leGGG~C~~~~~C~-------------------~~~l~f---rG------~~i~~avl~ 97 (300)
+|++.+. . ...++..|||+=|||++.....+. +-++-- +| ..-.-++.+
T Consensus 107 s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~ 186 (374)
T PF10340_consen 107 SYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQLRQLVATYD 186 (374)
T ss_pred eEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHHHHHHHHHH
Confidence 4777763 2 234689999999999998865554 222222 33 223334557
Q ss_pred HHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHh
Q 035542 98 DLLTVKGMINAQNAILSGCSAGGFASILYCDNFRA 132 (300)
Q Consensus 98 ~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~ 132 (300)
+|.+.. ..++|+|.|.||||--++.-..+++.
T Consensus 187 ~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~ 218 (374)
T PF10340_consen 187 YLVESE---GNKNIILMGDSAGGNLALSFLQYLKK 218 (374)
T ss_pred HHHhcc---CCCeEEEEecCccHHHHHHHHHHHhh
Confidence 777422 35899999999999777777777776
No 6
>PRK10162 acetyl esterase; Provisional
Probab=96.24 E-value=0.017 Score=54.91 Aligned_cols=88 Identities=16% Similarity=0.128 Sum_probs=56.5
Q ss_pred CCCCCceeeecCCCCCCccEEEEecccceeCCccc-----cc------c---cccccc---------hHHHHHHHHHHHh
Q 035542 44 DCSPPTYHFDKGFGAGINNWLVFVEGGGWCNDVTT-----CH------G---TNLHFR---------EARVFLAVMKDLL 100 (300)
Q Consensus 44 DGSp~~yy~~~g~g~gs~~wli~leGGG~C~~~~~-----C~------~---~~l~fr---------G~~i~~avl~~l~ 100 (300)
+|.-+...+++.. .....|||+-||||..+..+ |. + ..+.|| ...-..++++|+.
T Consensus 66 ~g~i~~~~y~P~~--~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~ 143 (318)
T PRK10162 66 YGQVETRLYYPQP--DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFH 143 (318)
T ss_pred CCceEEEEECCCC--CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHH
Confidence 5666666666642 24579999999999865322 21 0 111222 3455667788876
Q ss_pred hcc-CCC-CCCeEEEeecChhHHHHHHhHHHHHhh
Q 035542 101 TVK-GMI-NAQNAILSGCSAGGFASILYCDNFRAL 133 (300)
Q Consensus 101 ~~~-gl~-~a~~vilsG~SAGG~g~~~~~d~v~~~ 133 (300)
++. .+. ++++|+|.|.||||.-++.-+-.+++.
T Consensus 144 ~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~ 178 (318)
T PRK10162 144 QHAEDYGINMSRIGFAGDSAGAMLALASALWLRDK 178 (318)
T ss_pred HhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhc
Confidence 521 133 578999999999998777766666653
No 7
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=94.80 E-value=0.051 Score=47.77 Aligned_cols=109 Identities=19% Similarity=0.255 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccccccCCCCchhHHHHHHHH-
Q 035542 89 ARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFINVKDISDASHIEEFFAQ- 167 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~~- 167 (300)
..-+.+++++|.+ ++.-++++|.+.|.|+||+.|.+-.- ..|...+ .+++.+|+ .|.......... +..
T Consensus 45 ~~D~~~~i~~l~~-~~~iD~~ri~i~G~S~GG~~a~~~~~----~~~~~f~-a~v~~~g~-~d~~~~~~~~~~---~~~~ 114 (213)
T PF00326_consen 45 VDDVVAAIEYLIK-QYYIDPDRIGIMGHSYGGYLALLAAT----QHPDRFK-AAVAGAGV-SDLFSYYGTTDI---YTKA 114 (213)
T ss_dssp HHHHHHHHHHHHH-TTSEEEEEEEEEEETHHHHHHHHHHH----HTCCGSS-EEEEESE--SSTTCSBHHTCC---HHHG
T ss_pred hhhHHHHHHHHhc-cccccceeEEEEcccccccccchhhc----ccceeee-eeecccee-cchhcccccccc---cccc
Confidence 3446677899988 56788999999999999988875544 2343211 23455554 354444322111 111
Q ss_pred HHHhhccCccCCcccccccCCCCcCcchhhhhhc--CCCceEEeechhhH
Q 035542 168 VVATHGSIKHLPASCTKRLNPAGLCFFPQYVAGQ--VITPLFIINSAYDR 215 (300)
Q Consensus 168 ~~~l~~~~~~lp~~C~~~~~~~w~C~f~~~~~~~--i~tP~Fi~~s~YD~ 215 (300)
.....+ .+..-.. .++=+-|..-+.. +++|++|++..-|.
T Consensus 115 ~~~~~~----~~~~~~~----~~~~~s~~~~~~~~~~~~P~li~hG~~D~ 156 (213)
T PF00326_consen 115 EYLEYG----DPWDNPE----FYRELSPISPADNVQIKPPVLIIHGENDP 156 (213)
T ss_dssp HHHHHS----STTTSHH----HHHHHHHGGGGGGCGGGSEEEEEEETTBS
T ss_pred cccccC----ccchhhh----hhhhhccccccccccCCCCEEEEccCCCC
Confidence 111111 1111000 0111223333444 89999999998885
No 8
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=94.71 E-value=0.21 Score=46.75 Aligned_cols=85 Identities=18% Similarity=0.257 Sum_probs=54.6
Q ss_pred ceeeec-CCCCCCccEEEEecccceeCCccccc--------------ccccccc---------hHHHHHHHHHHHhhccC
Q 035542 49 TYHFDK-GFGAGINNWLVFVEGGGWCNDVTTCH--------------GTNLHFR---------EARVFLAVMKDLLTVKG 104 (300)
Q Consensus 49 ~yy~~~-g~g~gs~~wli~leGGG~C~~~~~C~--------------~~~l~fr---------G~~i~~avl~~l~~~~g 104 (300)
...+++ ....+....+||+=||||........ -..+-|| -..-..+++.++.++..
T Consensus 66 ~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~ 145 (312)
T COG0657 66 VRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLRANAA 145 (312)
T ss_pred EEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHHhhhH
Confidence 355555 23234578999999999986633322 0111111 12335667777776311
Q ss_pred -CC-CCCeEEEeecChhHHHHHHhHHHHHhh
Q 035542 105 -MI-NAQNAILSGCSAGGFASILYCDNFRAL 133 (300)
Q Consensus 105 -l~-~a~~vilsG~SAGG~g~~~~~d~v~~~ 133 (300)
+. ++++|.|+|+||||.=+..-+...++.
T Consensus 146 ~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~ 176 (312)
T COG0657 146 ELGIDPSRIAVAGDSAGGHLALALALAARDR 176 (312)
T ss_pred hhCCCccceEEEecCcccHHHHHHHHHHHhc
Confidence 22 588999999999998888888888876
No 9
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=94.27 E-value=0.085 Score=54.99 Aligned_cols=110 Identities=18% Similarity=0.201 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccccccCCCCchhHHHHHHHHH
Q 035542 89 ARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFINVKDISDASHIEEFFAQV 168 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~~~ 168 (300)
.+-+.+.++.|.+ .++-++++|-++|.|.||+-|+.-.-.-- .+ ..+++.+|.--+........ ..++...
T Consensus 454 ~~D~~~~~~~l~~-~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f-----~a~~~~~~~~~~~~~~~~~~--~~~~~~~ 524 (620)
T COG1506 454 LEDLIAAVDALVK-LPLVDPERIGITGGSYGGYMTLLAATKTP-RF-----KAAVAVAGGVDWLLYFGEST--EGLRFDP 524 (620)
T ss_pred HHHHHHHHHHHHh-CCCcChHHeEEeccChHHHHHHHHHhcCc-hh-----heEEeccCcchhhhhccccc--hhhcCCH
Confidence 3445566676666 67888889999999999988754332222 22 22333333111111111000 0000000
Q ss_pred HHhhccCccCCcccccccCCCCcCcchhhhhhcCCCceEEeechhhH
Q 035542 169 VATHGSIKHLPASCTKRLNPAGLCFFPQYVAGQVITPLFIINSAYDR 215 (300)
Q Consensus 169 ~~l~~~~~~lp~~C~~~~~~~w~C~f~~~~~~~i~tP~Fi~~s~YD~ 215 (300)
-.. ... +.. ..+.+.=.-|-+..+.|++|++|||+..|.
T Consensus 525 ~~~---~~~-~~~----~~~~~~~~sp~~~~~~i~~P~LliHG~~D~ 563 (620)
T COG1506 525 EEN---GGG-PPE----DREKYEDRSPIFYADNIKTPLLLIHGEEDD 563 (620)
T ss_pred HHh---CCC-ccc----ChHHHHhcChhhhhcccCCCEEEEeecCCc
Confidence 000 000 111 111234466778899999999999999986
No 10
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=93.99 E-value=0.11 Score=51.74 Aligned_cols=68 Identities=18% Similarity=0.195 Sum_probs=47.9
Q ss_pred ccEEEEecccceeCCccccc-------------ccccccc------------------hHHHHHHHHHHHhhcc-CC-CC
Q 035542 61 NNWLVFVEGGGWCNDVTTCH-------------GTNLHFR------------------EARVFLAVMKDLLTVK-GM-IN 107 (300)
Q Consensus 61 ~~wli~leGGG~C~~~~~C~-------------~~~l~fr------------------G~~i~~avl~~l~~~~-gl-~~ 107 (300)
.-+||++-||||..+..+-. -..+.|| |..-..++|+|+.++. .+ .+
T Consensus 95 ~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd 174 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGD 174 (493)
T ss_pred CCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999986643321 1123344 5667778888888742 11 57
Q ss_pred CCeEEEeecChhHHHHHHhHH
Q 035542 108 AQNAILSGCSAGGFASILYCD 128 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d 128 (300)
+++|.|.|.||||..+.++.-
T Consensus 175 ~~~v~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 175 PDSVTIFGESAGGASVSLLLL 195 (493)
T ss_pred cceEEEEeecHHHHHhhhHhh
Confidence 999999999999987766543
No 11
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=93.72 E-value=0.17 Score=49.64 Aligned_cols=89 Identities=21% Similarity=0.311 Sum_probs=57.5
Q ss_pred CCccEEEEecccceeCCcccc------c--------c---cccccch-------------HHHHHHHHHHHhhccCCCCC
Q 035542 59 GINNWLVFVEGGGWCNDVTTC------H--------G---TNLHFRE-------------ARVFLAVMKDLLTVKGMINA 108 (300)
Q Consensus 59 gs~~wli~leGGG~C~~~~~C------~--------~---~~l~frG-------------~~i~~avl~~l~~~~gl~~a 108 (300)
-.++||++..|=|-|+....| . + -.+-||| -.-.+|++++|.++..=++|
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka 214 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKA 214 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCCh
Confidence 368999999999999887554 1 1 1122343 23456788888874334689
Q ss_pred CeEEEeecChhH-HHHHHhHHHHHhhCCCccEEEEeecccc
Q 035542 109 QNAILSGCSAGG-FASILYCDNFRALFPVGTRVKCLADAGF 148 (300)
Q Consensus 109 ~~vilsG~SAGG-~g~~~~~d~v~~~lp~~~~v~~l~DSG~ 148 (300)
+++++-|+|-|| .+|....+.+-+. ..+++...+.|-||
T Consensus 215 ~~Ii~yG~SLGG~Vqa~AL~~~~~~~-~dgi~~~~ikDRsf 254 (365)
T PF05677_consen 215 KNIILYGHSLGGGVQAEALKKEVLKG-SDGIRWFLIKDRSF 254 (365)
T ss_pred heEEEeeccccHHHHHHHHHhccccc-CCCeeEEEEecCCc
Confidence 999999999998 3343222222221 12577778888774
No 12
>PRK10566 esterase; Provisional
Probab=93.38 E-value=0.37 Score=42.89 Aligned_cols=52 Identities=21% Similarity=0.346 Sum_probs=32.2
Q ss_pred HHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccc
Q 035542 93 LAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFF 149 (300)
Q Consensus 93 ~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~F 149 (300)
.++++++.+ ++.-+.++|.+.|.|+||.-++.-+ ...|.-..+..+..++++
T Consensus 92 ~~~~~~l~~-~~~~~~~~i~v~G~S~Gg~~al~~~----~~~~~~~~~~~~~~~~~~ 143 (249)
T PRK10566 92 PTLRAAIRE-EGWLLDDRLAVGGASMGGMTALGIM----ARHPWVKCVASLMGSGYF 143 (249)
T ss_pred HHHHHHHHh-cCCcCccceeEEeecccHHHHHHHH----HhCCCeeEEEEeeCcHHH
Confidence 345666666 4555789999999999998886332 233422223334456654
No 13
>PRK10115 protease 2; Provisional
Probab=92.84 E-value=0.33 Score=51.45 Aligned_cols=113 Identities=17% Similarity=0.102 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccccccCCCCchhHHHHHHHHH
Q 035542 89 ARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFINVKDISDASHIEEFFAQV 168 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~~~ 168 (300)
..-+.++.++|.+ .|+-++++|.+.|.||||+-+..-. .+-|. .++++..---|+|....-....+..... -
T Consensus 505 ~~D~~a~~~~Lv~-~g~~d~~rl~i~G~S~GG~l~~~~~----~~~Pd--lf~A~v~~vp~~D~~~~~~~~~~p~~~~-~ 576 (686)
T PRK10115 505 FNDYLDACDALLK-LGYGSPSLCYGMGGSAGGMLMGVAI----NQRPE--LFHGVIAQVPFVDVVTTMLDESIPLTTG-E 576 (686)
T ss_pred HHHHHHHHHHHHH-cCCCChHHeEEEEECHHHHHHHHHH----hcChh--heeEEEecCCchhHhhhcccCCCCCChh-H
Confidence 4456788899999 7999999999999999997553221 11231 2333333333444332110000000000 1
Q ss_pred HHhhccCccCCcccccccCCCCcCcchhhhhhcCCCc-eEEeechhhH
Q 035542 169 VATHGSIKHLPASCTKRLNPAGLCFFPQYVAGQVITP-LFIINSAYDR 215 (300)
Q Consensus 169 ~~l~~~~~~lp~~C~~~~~~~w~C~f~~~~~~~i~tP-~Fi~~s~YD~ 215 (300)
+..+|. |.+ ....+.++-+=|.+-+..+++| ++|+++.-|.
T Consensus 577 ~~e~G~----p~~--~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~ 618 (686)
T PRK10115 577 FEEWGN----PQD--PQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDS 618 (686)
T ss_pred HHHhCC----CCC--HHHHHHHHHcCchhccCccCCCceeEEecCCCC
Confidence 112221 110 0000012345566677788999 7888998885
No 14
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=92.66 E-value=1.4 Score=43.72 Aligned_cols=35 Identities=14% Similarity=0.139 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHH
Q 035542 90 RVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASIL 125 (300)
Q Consensus 90 ~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~ 125 (300)
...++++++|.. ...-+.++|.+.|.|.||.-++.
T Consensus 247 ~~~~avld~l~~-~~~vd~~ri~l~G~S~GG~~Al~ 281 (414)
T PRK05077 247 LLHQAVLNALPN-VPWVDHTRVAAFGFRFGANVAVR 281 (414)
T ss_pred HHHHHHHHHHHh-CcccCcccEEEEEEChHHHHHHH
Confidence 344789999877 33336789999999999976653
No 15
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=92.28 E-value=0.4 Score=39.06 Aligned_cols=40 Identities=25% Similarity=0.322 Sum_probs=26.8
Q ss_pred CCeEEEeecChhH-HHHHHhHHHHHhhCCCccEEEEeeccc
Q 035542 108 AQNAILSGCSAGG-FASILYCDNFRALFPVGTRVKCLADAG 147 (300)
Q Consensus 108 a~~vilsG~SAGG-~g~~~~~d~v~~~lp~~~~v~~l~DSG 147 (300)
..+|+++|+|-|| +|+++..+..........++++++=++
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~ 103 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGA 103 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCC
Confidence 3799999999999 566666666555443334566666544
No 16
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=91.13 E-value=0.79 Score=35.62 Aligned_cols=47 Identities=23% Similarity=0.345 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCeEEEeecChh-HHHHHHhHHHHHhhCCCccEE
Q 035542 89 ARVFLAVMKDLLTVKGMINAQNAILSGCSAG-GFASILYCDNFRALFPVGTRV 140 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~~a~~vilsG~SAG-G~g~~~~~d~v~~~lp~~~~v 140 (300)
.++++..+++..+...+..+++||+.|+|.| |+++ ++...+..++..
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAs-----RIa~aFg~gA~T 67 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLAS-----RIAAAFGAGADT 67 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHH-----HHHHHHCC--EE
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHH-----HHHHHhcCCCCE
Confidence 5788889999888555778899999999998 5555 566666544443
No 17
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=90.50 E-value=0.8 Score=42.38 Aligned_cols=66 Identities=20% Similarity=0.287 Sum_probs=41.5
Q ss_pred CCCccEEEEecccceeC-Cccccc---------ccccccch-----------HHHHHH--HHHHHhhccCCCCCCeEEEe
Q 035542 58 AGINNWLVFVEGGGWCN-DVTTCH---------GTNLHFRE-----------ARVFLA--VMKDLLTVKGMINAQNAILS 114 (300)
Q Consensus 58 ~gs~~wli~leGGG~C~-~~~~C~---------~~~l~frG-----------~~i~~a--vl~~l~~~~gl~~a~~vils 114 (300)
+.+.|++||.-||=|-. |...|. +-.+--.| ..+.++ -+++++. -+++++++++.
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk--~~~n~k~l~~g 141 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILK--YTENTKVLTFG 141 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHH--hcccceeEEEc
Confidence 56899999999998854 444454 11111122 112221 2355555 48899999999
Q ss_pred ecChhHHHHHH
Q 035542 115 GCSAGGFASIL 125 (300)
Q Consensus 115 G~SAGG~g~~~ 125 (300)
|+|||+-=++.
T Consensus 142 GHSaGAHLa~q 152 (270)
T KOG4627|consen 142 GHSAGAHLAAQ 152 (270)
T ss_pred ccchHHHHHHH
Confidence 99999954433
No 18
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=86.20 E-value=2.5 Score=41.92 Aligned_cols=98 Identities=18% Similarity=0.166 Sum_probs=59.0
Q ss_pred eecCCCCCCcccCCCCCc---------------eeee----cCCCCC-CccEEEEecccceeCCcccc--c---------
Q 035542 32 VENGVVEGAVCLDCSPPT---------------YHFD----KGFGAG-INNWLVFVEGGGWCNDVTTC--H--------- 80 (300)
Q Consensus 32 l~~a~~~ga~ClDGSp~~---------------yy~~----~g~g~g-s~~wli~leGGG~C~~~~~C--~--------- 80 (300)
+.+|...++.|..-.+.. -|+. ++..++ .--++||+-|||+=.+..+- .
T Consensus 76 ~~~a~~~~~~C~Q~~~~~~~~~~~~~~~~sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~ 155 (535)
T PF00135_consen 76 VRDATKYGPACPQPPPPGPSPGFNPPVGQSEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASK 155 (535)
T ss_dssp EEETBS---BESCECTTSSHHHCSHSSHBES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHH
T ss_pred hhhhhhcccccccccccccccccccccCCCchHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCC
Confidence 345778889999766543 2222 222111 24689999999987665421 1
Q ss_pred ------------------cccc----ccchHHHHHHHHHHHhhcc-CCC-CCCeEEEeecChhHHHHHHhHHH
Q 035542 81 ------------------GTNL----HFREARVFLAVMKDLLTVK-GMI-NAQNAILSGCSAGGFASILYCDN 129 (300)
Q Consensus 81 ------------------~~~l----~frG~~i~~avl~~l~~~~-gl~-~a~~vilsG~SAGG~g~~~~~d~ 129 (300)
.... -=.|..-.++.|+|+.+|- .|. ++++|.|.|.||||..+.+|.-.
T Consensus 156 ~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s 228 (535)
T PF00135_consen 156 DVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS 228 (535)
T ss_dssp TSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG
T ss_pred CEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeec
Confidence 0111 1235667788999998862 233 69999999999999888777655
No 19
>PRK13604 luxD acyl transferase; Provisional
Probab=86.17 E-value=2.5 Score=40.80 Aligned_cols=51 Identities=16% Similarity=0.074 Sum_probs=36.9
Q ss_pred chHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEE-Eeeccccc
Q 035542 87 REARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVK-CLADAGFF 149 (300)
Q Consensus 87 rG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~-~l~DSG~F 149 (300)
.|..-+.++++++++ + ..+++.|.|+|.||.-+++-+. . + . |. ++.|||+.
T Consensus 90 ~g~~Dl~aaid~lk~-~---~~~~I~LiG~SmGgava~~~A~----~-~-~--v~~lI~~sp~~ 141 (307)
T PRK13604 90 IGKNSLLTVVDWLNT-R---GINNLGLIAASLSARIAYEVIN----E-I-D--LSFLITAVGVV 141 (307)
T ss_pred ccHHHHHHHHHHHHh-c---CCCceEEEEECHHHHHHHHHhc----C-C-C--CCEEEEcCCcc
Confidence 367899999999987 3 3467999999999977644332 1 1 1 33 78898865
No 20
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=84.36 E-value=1.7 Score=34.75 Aligned_cols=40 Identities=25% Similarity=0.308 Sum_probs=29.4
Q ss_pred chHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHH
Q 035542 87 REARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCD 128 (300)
Q Consensus 87 rG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d 128 (300)
.+...++.+++++.. ...++++++|.|.|+||..+..-..
T Consensus 41 ~~~~~~~~~~~~~~~--~~~~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 41 DGADAVERVLADIRA--GYPDPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp HHSHHHHHHHHHHHH--HHCTCCEEEEEEETHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHh--hcCCCCcEEEEEEccCcHHHHHHhh
Confidence 445678888888754 2338999999999999987654433
No 21
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=83.47 E-value=1.4 Score=45.15 Aligned_cols=83 Identities=18% Similarity=0.221 Sum_probs=51.0
Q ss_pred CCCCceeeecCCCCCCccEEEEecccceeCCccc--------cc---------ccccccchHH-----HHHHHHHHHhhc
Q 035542 45 CSPPTYHFDKGFGAGINNWLVFVEGGGWCNDVTT--------CH---------GTNLHFREAR-----VFLAVMKDLLTV 102 (300)
Q Consensus 45 GSp~~yy~~~g~g~gs~~wli~leGGG~C~~~~~--------C~---------~~~l~frG~~-----i~~avl~~l~~~ 102 (300)
+..-.|||.||. =..-+.|||.|=---...|- |- ...-.+-|.. |.+.|-+.|..
T Consensus 275 reEi~yYFnPGD--~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~- 351 (511)
T TIGR03712 275 RQEFIYYFNPGD--FKPPLNVYFSGYRPAEGFEGYFMMKRLGAPFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDY- 351 (511)
T ss_pred CCeeEEecCCcC--CCCCeEEeeccCcccCcchhHHHHHhcCCCeEEeeccccccceeeeCcHHHHHHHHHHHHHHHHH-
Confidence 566779999995 46679999988322211111 11 2233445533 33323333333
Q ss_pred cCCCCCCeEEEeecChhHHHHHHhHHHHH
Q 035542 103 KGMINAQNAILSGCSAGGFASILYCDNFR 131 (300)
Q Consensus 103 ~gl~~a~~vilsG~SAGG~g~~~~~d~v~ 131 (300)
.|+ +++++||||-|+|.+||+++...+.
T Consensus 352 LgF-~~~qLILSGlSMGTfgAlYYga~l~ 379 (511)
T TIGR03712 352 LGF-DHDQLILSGLSMGTFGALYYGAKLS 379 (511)
T ss_pred hCC-CHHHeeeccccccchhhhhhcccCC
Confidence 566 4678999999999999998775544
No 22
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=80.95 E-value=2.1 Score=37.75 Aligned_cols=37 Identities=16% Similarity=0.253 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 90 RVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 90 ~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
..++.+++++.++++ -++++|+|.|.|+||..++.-+
T Consensus 77 ~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a 113 (212)
T TIGR01840 77 ESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLG 113 (212)
T ss_pred HHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHH
Confidence 456678888887433 3567999999999998775433
No 23
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=78.81 E-value=1.9 Score=38.51 Aligned_cols=38 Identities=11% Similarity=0.189 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhhccCCCCCCe-EEEeecChhHHHHHHhHHH
Q 035542 90 RVFLAVMKDLLTVKGMINAQN-AILSGCSAGGFASILYCDN 129 (300)
Q Consensus 90 ~i~~avl~~l~~~~gl~~a~~-vilsG~SAGG~g~~~~~d~ 129 (300)
-+.++++.++.++ ++-... ..|+|+|.||++|+..+=.
T Consensus 97 ~l~~el~p~i~~~--~~~~~~~~~i~G~S~GG~~Al~~~l~ 135 (251)
T PF00756_consen 97 FLTEELIPYIEAN--YRTDPDRRAIAGHSMGGYGALYLALR 135 (251)
T ss_dssp HHHTHHHHHHHHH--SSEEECCEEEEEETHHHHHHHHHHHH
T ss_pred ehhccchhHHHHh--cccccceeEEeccCCCcHHHHHHHHh
Confidence 3556667776664 332222 9999999999999754433
No 24
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=78.46 E-value=6.4 Score=35.18 Aligned_cols=39 Identities=26% Similarity=0.308 Sum_probs=26.6
Q ss_pred CCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccc
Q 035542 108 AQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAG 147 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG 147 (300)
..+++++|+|-||.=|.+.+-.++...+ ..++.++.=++
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~-~~~i~~~tFg~ 165 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGP-GSDVTVYTFGQ 165 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCC-CCceEEEEeCC
Confidence 4689999999999766666666666553 33455555443
No 25
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=78.44 E-value=2.1 Score=39.92 Aligned_cols=49 Identities=22% Similarity=0.343 Sum_probs=31.3
Q ss_pred ccEEEEecccceeCCcccccccccccchHHHHHHHHHHHhhccCCC-CCCeEEEeecChhHHHHHH
Q 035542 61 NNWLVFVEGGGWCNDVTTCHGTNLHFREARVFLAVMKDLLTVKGMI-NAQNAILSGCSAGGFASIL 125 (300)
Q Consensus 61 ~~wli~leGGG~C~~~~~C~~~~l~frG~~i~~avl~~l~~~~gl~-~a~~vilsG~SAGG~g~~~ 125 (300)
.+|=+-|+|||+ ..+||-| |++.|.+ ++.. -.+--.++|.|||++.+..
T Consensus 3 ~~~~LsfsGGG~---------rG~yh~G------Vl~~L~e-~g~~l~~~~~~i~G~SAGAl~aa~ 52 (249)
T cd07220 3 SGWNISFAGCGF---------LGVYHVG------VASCLLE-HAPFLVANARKIYGASAGALTATA 52 (249)
T ss_pred CCceEEEeChHH---------HHHHHHH------HHHHHHh-cCCcccccCCeEEEEcHHHHHHHH
Confidence 478889999984 3444433 5666666 4532 1113568899999977664
No 26
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=77.92 E-value=2.9 Score=39.65 Aligned_cols=45 Identities=18% Similarity=0.243 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHH--hhCCC
Q 035542 89 ARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFR--ALFPV 136 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~--~~lp~ 136 (300)
..=++.+|.+|.+++++++.+ +.|+|+||+|...+.-... +.+|+
T Consensus 119 s~wlk~~msyL~~~Y~i~k~n---~VGhSmGg~~~~~Y~~~yg~dks~P~ 165 (288)
T COG4814 119 SKWLKKAMSYLQKHYNIPKFN---AVGHSMGGLGLTYYMIDYGDDKSLPP 165 (288)
T ss_pred HHHHHHHHHHHHHhcCCceee---eeeeccccHHHHHHHHHhcCCCCCcc
Confidence 556789999999987776554 7799999999887776665 35774
No 27
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=77.26 E-value=9.4 Score=35.19 Aligned_cols=36 Identities=14% Similarity=0.184 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 90 RVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 90 ~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
.-+.++++.|.+ ..+..++|+|.|.|.||+-++..+
T Consensus 83 ~d~~~~~~~l~~--~~~g~~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 83 ADIAAAIDAFRE--AAPHLRRIVAWGLCDAASAALLYA 118 (274)
T ss_pred HHHHHHHHHHHh--hCCCCCcEEEEEECHHHHHHHHHh
Confidence 456778887765 244557899999999998877664
No 28
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=76.55 E-value=6 Score=38.34 Aligned_cols=68 Identities=18% Similarity=0.205 Sum_probs=41.3
Q ss_pred HHHHHHHHhhccCCCCCCeEEEeecChhH-HHHHHhHHHHHhhCCCccEEEEeeccccccccCCCCchhHHHHHHHHH
Q 035542 92 FLAVMKDLLTVKGMINAQNAILSGCSAGG-FASILYCDNFRALFPVGTRVKCLADAGFFINVKDISDASHIEEFFAQV 168 (300)
Q Consensus 92 ~~avl~~l~~~~gl~~a~~vilsG~SAGG-~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~~~ 168 (300)
+++.++.|+.. .+ --+|+++|+|.|| +|++.-+|.++.-+....+|+++.=++ +-.|+..+.+.++..
T Consensus 157 ~~~~~~~L~~~--~~-~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~------PRvGn~~fa~~~d~~ 225 (336)
T KOG4569|consen 157 LDAELRRLIEL--YP-NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQ------PRVGNLAFAEWHDEL 225 (336)
T ss_pred HHHHHHHHHHh--cC-CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecC------CCcccHHHHHHHHhh
Confidence 44555666552 33 5689999999999 666666666666664334556555443 445665555555544
No 29
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=75.65 E-value=3.5 Score=43.65 Aligned_cols=39 Identities=23% Similarity=0.430 Sum_probs=32.4
Q ss_pred chHHHHHHHHHHHhhccCCCCCCeEEEeecChhH--HHHHHh
Q 035542 87 REARVFLAVMKDLLTVKGMINAQNAILSGCSAGG--FASILY 126 (300)
Q Consensus 87 rG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG--~g~~~~ 126 (300)
+...-+-|+.+.|.. .|+...++++..|.|||| .|+++|
T Consensus 506 NTf~DFIa~a~~Lv~-~g~~~~~~i~a~GGSAGGmLmGav~N 546 (682)
T COG1770 506 NTFTDFIAAARHLVK-EGYTSPDRIVAIGGSAGGMLMGAVAN 546 (682)
T ss_pred ccHHHHHHHHHHHHH-cCcCCccceEEeccCchhHHHHHHHh
Confidence 345678889999999 699999999999999999 455554
No 30
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=74.80 E-value=7.6 Score=36.30 Aligned_cols=57 Identities=19% Similarity=0.251 Sum_probs=36.0
Q ss_pred HHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeecccccccc
Q 035542 92 FLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFINV 152 (300)
Q Consensus 92 ~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~ 152 (300)
+.+.++.|.+..++ ..++|.|.|+|.||.-+..-+..+.+++ .++.++.=+|.++..
T Consensus 96 la~~l~~L~~~~g~-~~~~i~lIGhSlGa~vAg~~a~~~~~~v---~~iv~LDPa~p~f~~ 152 (275)
T cd00707 96 LAKFLDFLVDNTGL-SLENVHLIGHSLGAHVAGFAGKRLNGKL---GRITGLDPAGPLFSG 152 (275)
T ss_pred HHHHHHHHHHhcCC-ChHHEEEEEecHHHHHHHHHHHHhcCcc---ceeEEecCCcccccC
Confidence 44556666652233 4678999999999977766665554433 245565556665533
No 31
>PLN02408 phospholipase A1
Probab=74.61 E-value=18 Score=35.90 Aligned_cols=53 Identities=13% Similarity=0.181 Sum_probs=34.0
Q ss_pred CeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccccccCCCCchhHHHHHHHH
Q 035542 109 QNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFINVKDISDASHIEEFFAQ 167 (300)
Q Consensus 109 ~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~~ 167 (300)
..|+++|+|-||-=|.+.+-+++..++....|.++.=++ +--|+..+.++++.
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGs------PRVGN~~Fa~~~~~ 252 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGG------PRVGNRSFRRQLEK 252 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCC------CCcccHHHHHHHHh
Confidence 469999999999777778888887765332355555433 22355555555543
No 32
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=73.54 E-value=7 Score=36.94 Aligned_cols=48 Identities=19% Similarity=0.239 Sum_probs=34.9
Q ss_pred CCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccE--EEEeecccccccc
Q 035542 104 GMINAQNAILSGCSAGGFASILYCDNFRALFPVGTR--VKCLADAGFFINV 152 (300)
Q Consensus 104 gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~--v~~l~DSG~Fld~ 152 (300)
|++...+|.+.|.|-||.++..- -.++..+-++.+ +++.+=.|.-.|.
T Consensus 66 gl~~~~~v~l~GySqGG~Aa~~A-A~l~~~YApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 66 GLSPSSRVALWGYSQGGQAALWA-AELAPSYAPELNRDLVGAAAGGPPADL 115 (290)
T ss_pred CCCCCCCEEEEeeCccHHHHHHH-HHHhHHhCcccccceeEEeccCCccCH
Confidence 56667899999999999999654 456666655666 7777766654443
No 33
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=72.93 E-value=7.2 Score=40.00 Aligned_cols=37 Identities=22% Similarity=0.040 Sum_probs=28.6
Q ss_pred chHHHHHHHHHHHhhccC-C-CCCCeEEEeecChhHHHH
Q 035542 87 REARVFLAVMKDLLTVKG-M-INAQNAILSGCSAGGFAS 123 (300)
Q Consensus 87 rG~~i~~avl~~l~~~~g-l-~~a~~vilsG~SAGG~g~ 123 (300)
-|..-...+|+|..+|.- | .++++|-|.|.|||+..+
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si 194 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASI 194 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHH
Confidence 477777888888887511 2 479999999999999664
No 34
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=72.14 E-value=5.8 Score=37.47 Aligned_cols=92 Identities=24% Similarity=0.301 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccccccCCCCchhHHHHHHHHH
Q 035542 89 ARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFINVKDISDASHIEEFFAQV 168 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~~~ 168 (300)
+.-++|+-++|.+..| +.++|+|-|.|.|..-+ =+++.+.|. +-|.+ +|. |+ +| ++.++..
T Consensus 112 y~Di~avye~Lr~~~g--~~~~Iil~G~SiGt~~t----v~Lasr~~~-~alVL--~SP-f~-----S~---~rv~~~~- 172 (258)
T KOG1552|consen 112 YADIKAVYEWLRNRYG--SPERIILYGQSIGTVPT----VDLASRYPL-AAVVL--HSP-FT-----SG---MRVAFPD- 172 (258)
T ss_pred hhhHHHHHHHHHhhcC--CCceEEEEEecCCchhh----hhHhhcCCc-ceEEE--ecc-ch-----hh---hhhhccC-
Confidence 5678999999999655 89999999999998663 345566662 22222 222 11 11 1111111
Q ss_pred HHhhccCccCCcccccccCCCCcCcch-hhhhhcCCCceEEeechhhH
Q 035542 169 VATHGSIKHLPASCTKRLNPAGLCFFP-QYVAGQVITPLFIINSAYDR 215 (300)
Q Consensus 169 ~~l~~~~~~lp~~C~~~~~~~w~C~f~-~~~~~~i~tP~Fi~~s~YD~ 215 (300)
+... .|.-.|+ ..-++.|+.|+.|+++.=|.
T Consensus 173 --------------~~~~--~~~d~f~~i~kI~~i~~PVLiiHgtdDe 204 (258)
T KOG1552|consen 173 --------------TKTT--YCFDAFPNIEKISKITCPVLIIHGTDDE 204 (258)
T ss_pred --------------cceE--EeeccccccCcceeccCCEEEEecccCc
Confidence 1110 1122233 66788899999999998887
No 35
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=72.05 E-value=5.1 Score=39.95 Aligned_cols=36 Identities=31% Similarity=0.505 Sum_probs=24.4
Q ss_pred HHHHHHHHhh----ccC-CCCCCeEEEeecChhHHHHHHhH
Q 035542 92 FLAVMKDLLT----VKG-MINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 92 ~~avl~~l~~----~~g-l~~a~~vilsG~SAGG~g~~~~~ 127 (300)
++.+.++|+. ++. ..++++.+|+|.|.||++|+.-.
T Consensus 266 ~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~a 306 (411)
T PRK10439 266 WLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAG 306 (411)
T ss_pred HHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHH
Confidence 4444455544 223 35688999999999999987543
No 36
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=71.90 E-value=4.4 Score=37.38 Aligned_cols=23 Identities=17% Similarity=0.393 Sum_probs=18.8
Q ss_pred CCCeEEEeecChhHHHHHHhHHH
Q 035542 107 NAQNAILSGCSAGGFASILYCDN 129 (300)
Q Consensus 107 ~a~~vilsG~SAGG~g~~~~~d~ 129 (300)
+.+++.|+|+|+||..++..+-.
T Consensus 136 ~~~~~~~~G~S~GG~~a~~~a~~ 158 (275)
T TIGR02821 136 DGERQGITGHSMGGHGALVIALK 158 (275)
T ss_pred CCCceEEEEEChhHHHHHHHHHh
Confidence 45789999999999988766543
No 37
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=70.84 E-value=12 Score=31.13 Aligned_cols=44 Identities=18% Similarity=0.083 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhhccCCC--CCCeEEEeecChhHHHHHHhHHHHHhhC
Q 035542 89 ARVFLAVMKDLLTVKGMI--NAQNAILSGCSAGGFASILYCDNFRALF 134 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~--~a~~vilsG~SAGG~g~~~~~d~v~~~l 134 (300)
..+++.+.+.+.+ .+. ...+++++|+|.||-=|.+-+-.++...
T Consensus 8 ~~~~~~i~~~~~~--~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~ 53 (153)
T cd00741 8 RSLANLVLPLLKS--ALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRG 53 (153)
T ss_pred HHHHHHHHHHHHH--HHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhcc
Confidence 3444445544433 222 4679999999999955555555566543
No 38
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=70.82 E-value=7.5 Score=33.64 Aligned_cols=28 Identities=29% Similarity=0.519 Sum_probs=19.0
Q ss_pred HHHHHHhhccCCCCCCeEEEeecChhHHHHHH
Q 035542 94 AVMKDLLTVKGMINAQNAILSGCSAGGFASIL 125 (300)
Q Consensus 94 avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~ 125 (300)
-+++.|.+ .++.- =+++|.|||++=+.+
T Consensus 16 Gvl~~L~e-~~~~~---d~i~GtSaGai~aa~ 43 (194)
T cd07207 16 GALKALEE-AGILK---KRVAGTSAGAITAAL 43 (194)
T ss_pred HHHHHHHH-cCCCc---ceEEEECHHHHHHHH
Confidence 46666666 45442 689999999965433
No 39
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=69.73 E-value=31 Score=32.35 Aligned_cols=18 Identities=22% Similarity=0.388 Sum_probs=15.6
Q ss_pred hhhcCCCceEEeechhhH
Q 035542 198 VAGQVITPLFIINSAYDR 215 (300)
Q Consensus 198 ~~~~i~tP~Fi~~s~YD~ 215 (300)
.++.++.|++++++.-|.
T Consensus 309 ~l~~i~~Pvlii~g~~D~ 326 (371)
T PRK14875 309 RLASLAIPVLVIWGEQDR 326 (371)
T ss_pred HHhcCCCCEEEEEECCCC
Confidence 566789999999999995
No 40
>PLN02442 S-formylglutathione hydrolase
Probab=69.64 E-value=4.1 Score=38.00 Aligned_cols=22 Identities=23% Similarity=0.330 Sum_probs=18.3
Q ss_pred CCCeEEEeecChhHHHHHHhHH
Q 035542 107 NAQNAILSGCSAGGFASILYCD 128 (300)
Q Consensus 107 ~a~~vilsG~SAGG~g~~~~~d 128 (300)
+.++++|.|.|+||.+++..+-
T Consensus 141 ~~~~~~i~G~S~GG~~a~~~a~ 162 (283)
T PLN02442 141 DTSRASIFGHSMGGHGALTIYL 162 (283)
T ss_pred CCCceEEEEEChhHHHHHHHHH
Confidence 5688999999999998876443
No 41
>PRK10349 carboxylesterase BioH; Provisional
Probab=69.56 E-value=12 Score=33.17 Aligned_cols=49 Identities=16% Similarity=0.245 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccc
Q 035542 91 VFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAG 147 (300)
Q Consensus 91 i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG 147 (300)
.+....+++.. .+ .+++.|.|.|.||.-++..+ ...|..++-.++.|+.
T Consensus 60 ~~~~~~~~l~~-~~---~~~~~lvGhS~Gg~ia~~~a----~~~p~~v~~lili~~~ 108 (256)
T PRK10349 60 SLADMAEAVLQ-QA---PDKAIWLGWSLGGLVASQIA----LTHPERVQALVTVASS 108 (256)
T ss_pred CHHHHHHHHHh-cC---CCCeEEEEECHHHHHHHHHH----HhChHhhheEEEecCc
Confidence 45666777766 33 36889999999998776443 3345444444445654
No 42
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=69.20 E-value=12 Score=38.33 Aligned_cols=36 Identities=14% Similarity=0.013 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHh
Q 035542 89 ARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILY 126 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~ 126 (300)
..-+.++++++.. ....+ .+|.+.|.|.||.-+++-
T Consensus 79 ~~D~~~~i~~l~~-q~~~~-~~v~~~G~S~GG~~a~~~ 114 (550)
T TIGR00976 79 AADGYDLVDWIAK-QPWCD-GNVGMLGVSYLAVTQLLA 114 (550)
T ss_pred chHHHHHHHHHHh-CCCCC-CcEEEEEeChHHHHHHHH
Confidence 4556889999987 44444 699999999999766544
No 43
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=69.17 E-value=13 Score=39.47 Aligned_cols=93 Identities=24% Similarity=0.340 Sum_probs=57.7
Q ss_pred CCccceEEeecCCCCCCcccCCCCCceeee-cCCCCC-----CccEEEEecccc-eeCCccc---ccccccccch-----
Q 035542 24 GFSVPITYVENGVVEGAVCLDCSPPTYHFD-KGFGAG-----INNWLVFVEGGG-WCNDVTT---CHGTNLHFRE----- 88 (300)
Q Consensus 24 ~~~v~ltll~~a~~~ga~ClDGSp~~yy~~-~g~g~g-----s~~wli~leGGG-~C~~~~~---C~~~~l~frG----- 88 (300)
+..||++++.. .+-=+|||-|+.-+- -|+|.. +..-++++.=|| .|+-.-. =.+.++|=.|
T Consensus 451 Gt~VPM~Iv~k----k~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakK 526 (712)
T KOG2237|consen 451 GTKVPMFIVYK----KDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKK 526 (712)
T ss_pred CCccceEEEEe----chhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhh
Confidence 57899999984 455589999885443 333211 112233332111 1110000 0134555544
Q ss_pred ---HHHHHHHHHHHhhccCCCCCCeEEEeecChhHH
Q 035542 89 ---ARVFLAVMKDLLTVKGMINAQNAILSGCSAGGF 121 (300)
Q Consensus 89 ---~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~ 121 (300)
..-+.+..++|.+ .|+-+++++-+.|.||||+
T Consensus 527 qN~f~Dfia~AeyLve-~gyt~~~kL~i~G~SaGGl 561 (712)
T KOG2237|consen 527 QNSFDDFIACAEYLVE-NGYTQPSKLAIEGGSAGGL 561 (712)
T ss_pred cccHHHHHHHHHHHHH-cCCCCccceeEecccCccc
Confidence 5668889999999 6999999999999999995
No 44
>PLN02802 triacylglycerol lipase
Probab=68.88 E-value=15 Score=37.98 Aligned_cols=51 Identities=16% Similarity=0.249 Sum_probs=34.1
Q ss_pred CeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccccccCCCCchhHHHHHH
Q 035542 109 QNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFINVKDISDASHIEEFF 165 (300)
Q Consensus 109 ~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~ 165 (300)
.+|+++|+|-||-=|.+.+.+++...+....|.++.=.+ +--|+..+.+++
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGs------PRVGN~aFA~~~ 380 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGG------PRVGNRAFADRL 380 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCC------CCcccHHHHHHH
Confidence 479999999999777788888888776433455555333 223555555554
No 45
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=68.75 E-value=13 Score=34.76 Aligned_cols=66 Identities=21% Similarity=0.254 Sum_probs=41.9
Q ss_pred CCCCCeEEEeecChhHHHHHHhHHHHHhhCC------CccEEEEee-ccccccccCCCCchhHHHHHHHHHHH
Q 035542 105 MINAQNAILSGCSAGGFASILYCDNFRALFP------VGTRVKCLA-DAGFFINVKDISDASHIEEFFAQVVA 170 (300)
Q Consensus 105 l~~a~~vilsG~SAGG~g~~~~~d~v~~~lp------~~~~v~~l~-DSG~Fld~~~~~g~~~~~~~~~~~~~ 170 (300)
.++++.|+++|||-||+|--+--..-++-+. +--+..-|. |+|.+.-.-|++-.+.+..+-.++..
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~ 76 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRA 76 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhh
Confidence 4678899999999999996554444333221 000111233 88988766677766667777666654
No 46
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=67.95 E-value=17 Score=31.76 Aligned_cols=52 Identities=13% Similarity=0.101 Sum_probs=34.7
Q ss_pred HHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeecc
Q 035542 91 VFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADA 146 (300)
Q Consensus 91 i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DS 146 (300)
.....++.+.+. ..-...+|.|.|.||+=|+-=+..+.+. ...+...++.|+
T Consensus 51 la~~y~~~I~~~---~~~gp~~L~G~S~Gg~lA~E~A~~Le~~-G~~v~~l~liD~ 102 (229)
T PF00975_consen 51 LASRYAEAIRAR---QPEGPYVLAGWSFGGILAFEMARQLEEA-GEEVSRLILIDS 102 (229)
T ss_dssp HHHHHHHHHHHH---TSSSSEEEEEETHHHHHHHHHHHHHHHT-T-SESEEEEESC
T ss_pred HHHHHHHHhhhh---CCCCCeeehccCccHHHHHHHHHHHHHh-hhccCceEEecC
Confidence 344444555441 1122899999999999988888888777 444556667785
No 47
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=66.83 E-value=9.2 Score=33.83 Aligned_cols=35 Identities=17% Similarity=0.339 Sum_probs=24.5
Q ss_pred HHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 91 VFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 91 i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
.+.++|+.+.+ .+ -.+++|+|.|.|-||.-++.-+
T Consensus 89 ~l~~li~~~~~-~~-i~~~ri~l~GFSQGa~~al~~~ 123 (216)
T PF02230_consen 89 RLDELIDEEVA-YG-IDPSRIFLGGFSQGAAMALYLA 123 (216)
T ss_dssp HHHHHHHHHHH-TT---GGGEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cC-CChhheehhhhhhHHHHHHHHH
Confidence 45566676666 45 6678999999999997776543
No 48
>PLN02454 triacylglycerol lipase
Probab=66.37 E-value=18 Score=36.38 Aligned_cols=64 Identities=16% Similarity=0.173 Sum_probs=36.1
Q ss_pred HHHHhhccCCCCCC-eEEEeecChhHHHHHHhHHHHHhhC--CCccEEEEeeccccccccCCCCchhHHHHHHHH
Q 035542 96 MKDLLTVKGMINAQ-NAILSGCSAGGFASILYCDNFRALF--PVGTRVKCLADAGFFINVKDISDASHIEEFFAQ 167 (300)
Q Consensus 96 l~~l~~~~gl~~a~-~vilsG~SAGG~g~~~~~d~v~~~l--p~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~~ 167 (300)
++.|++ ..++.+ .|+++|+|-||.-|.+.+.+++... +....|.++.=++ +--|+..+.+++..
T Consensus 216 V~~l~~--~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGs------PRVGN~~Fa~~~~~ 282 (414)
T PLN02454 216 IKELLE--RYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGS------PQVGNKEFNDRFKE 282 (414)
T ss_pred HHHHHH--hCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCC------CcccCHHHHHHHHh
Confidence 344444 133333 6999999999977777777776543 2233455554333 22355545555443
No 49
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=65.97 E-value=8 Score=35.44 Aligned_cols=43 Identities=16% Similarity=0.274 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCC
Q 035542 89 ARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPV 136 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~ 136 (300)
...+.++++++..++ --++++|.++|.|+||.-+. .+.-.+|.
T Consensus 78 ~~~i~~lv~~v~~~~-~iD~~RVyv~G~S~Gg~ma~----~la~~~pd 120 (220)
T PF10503_consen 78 VAFIAALVDYVAARY-NIDPSRVYVTGLSNGGMMAN----VLACAYPD 120 (220)
T ss_pred hhhHHHHHHhHhhhc-ccCCCceeeEEECHHHHHHH----HHHHhCCc
Confidence 345778889988843 33788999999999995553 44445664
No 50
>COG4099 Predicted peptidase [General function prediction only]
Probab=65.92 E-value=20 Score=35.04 Aligned_cols=87 Identities=15% Similarity=0.253 Sum_probs=53.9
Q ss_pred CCceeeecCCCCCCcc--EEEEecccceeCC------------------ccccc-------------ccccccchHHHHH
Q 035542 47 PPTYHFDKGFGAGINN--WLVFVEGGGWCND------------------VTTCH-------------GTNLHFREARVFL 93 (300)
Q Consensus 47 p~~yy~~~g~g~gs~~--wli~leGGG~C~~------------------~~~C~-------------~~~l~frG~~i~~ 93 (300)
++.+|.-+++.++.+- ++|||-|+|.=.+ ++-|. +.+---+=..-++
T Consensus 175 kYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~~~id 254 (387)
T COG4099 175 KYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLIEKID 254 (387)
T ss_pred eEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccchhHHHHHH
Confidence 4556776777555543 6899988886544 23343 0100011133456
Q ss_pred HHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhC
Q 035542 94 AVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALF 134 (300)
Q Consensus 94 avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~l 134 (300)
.+.+.|.++++.+ -.++.++|-|-||.|++.-...+-+.+
T Consensus 255 li~~vlas~ynID-~sRIYviGlSrG~~gt~al~~kfPdfF 294 (387)
T COG4099 255 LILEVLASTYNID-RSRIYVIGLSRGGFGTWALAEKFPDFF 294 (387)
T ss_pred HHHHHHhhccCcc-cceEEEEeecCcchhhHHHHHhCchhh
Confidence 6666777755554 468999999999999987665554444
No 51
>PLN00021 chlorophyllase
Probab=65.15 E-value=28 Score=33.33 Aligned_cols=72 Identities=21% Similarity=0.148 Sum_probs=41.2
Q ss_pred CCccEEEEecccceeCCccccc-------cc-----ccc-cc---h---HHHHHHHHHHHhhcc--CC-----CCCCeEE
Q 035542 59 GINNWLVFVEGGGWCNDVTTCH-------GT-----NLH-FR---E---ARVFLAVMKDLLTVK--GM-----INAQNAI 112 (300)
Q Consensus 59 gs~~wli~leGGG~C~~~~~C~-------~~-----~l~-fr---G---~~i~~avl~~l~~~~--gl-----~~a~~vi 112 (300)
+....|||+-|+++......=. +- .++ +. . .....++++|+.+.. -+ .+.+++.
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~ 129 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLA 129 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheE
Confidence 4567899999988765421100 00 000 11 1 123455667666420 01 3457899
Q ss_pred EeecChhHHHHHHhHHHH
Q 035542 113 LSGCSAGGFASILYCDNF 130 (300)
Q Consensus 113 lsG~SAGG~g~~~~~d~v 130 (300)
|.|+|+||..++.-+-..
T Consensus 130 l~GHS~GG~iA~~lA~~~ 147 (313)
T PLN00021 130 LAGHSRGGKTAFALALGK 147 (313)
T ss_pred EEEECcchHHHHHHHhhc
Confidence 999999998887665433
No 52
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=64.63 E-value=7.3 Score=35.62 Aligned_cols=31 Identities=32% Similarity=0.499 Sum_probs=22.4
Q ss_pred HHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 95 VMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 95 vl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
|++.|.+ +|+. .+...++|.|||++-+.+++
T Consensus 17 Vl~~L~e-~gi~-~~~~~i~G~SAGAl~aa~~a 47 (233)
T cd07224 17 VLSLLIE-AGVI-NETTPLAGASAGSLAAACSA 47 (233)
T ss_pred HHHHHHH-cCCC-CCCCEEEEEcHHHHHHHHHH
Confidence 6777777 5764 23468999999997766554
No 53
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=64.56 E-value=14 Score=31.68 Aligned_cols=32 Identities=38% Similarity=0.596 Sum_probs=21.6
Q ss_pred HHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 92 FLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 92 ~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
---+++.|.+ .++. . =+++|.|||++-+.+.+
T Consensus 15 ~~Gvl~~L~~-~~~~-~--d~i~GtSaGal~a~~~a 46 (175)
T cd07205 15 HIGVLKALEE-AGIP-I--DIVSGTSAGAIVGALYA 46 (175)
T ss_pred HHHHHHHHHH-cCCC-e--eEEEEECHHHHHHHHHH
Confidence 3456777777 5653 3 48999999997664444
No 54
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=64.13 E-value=10 Score=32.26 Aligned_cols=34 Identities=21% Similarity=0.428 Sum_probs=23.4
Q ss_pred HHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 92 FLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 92 ~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
---+++.|.+ +++.+ .--.++|.|||++-+...+
T Consensus 13 ~~gvl~~l~~-~~~~~-~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 13 HAGVLSALAE-RGLLD-CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHH-hCCcc-CCCEEEEEcHHHHHHHHHh
Confidence 3446666766 45542 3467899999998776666
No 55
>PLN03037 lipase class 3 family protein; Provisional
Probab=61.92 E-value=24 Score=36.65 Aligned_cols=55 Identities=13% Similarity=0.158 Sum_probs=35.9
Q ss_pred CCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccccccCCCCchhHHHHHHHH
Q 035542 107 NAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFINVKDISDASHIEEFFAQ 167 (300)
Q Consensus 107 ~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~~ 167 (300)
+...|+++|+|-||-=|.+++-.++..+|....|.++.=++ +--|+..+.++++.
T Consensus 316 e~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGs------PRVGN~aFA~~~~~ 370 (525)
T PLN03037 316 EEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGA------PRVGNLAFKEKLNE 370 (525)
T ss_pred CcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecC------CCccCHHHHHHHHh
Confidence 45589999999999888888888888776432344444333 23355555555543
No 56
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=61.90 E-value=11 Score=34.60 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=20.1
Q ss_pred HHHHHHHhhccCCCCCCeEEEeecChhHHHHHH
Q 035542 93 LAVMKDLLTVKGMINAQNAILSGCSAGGFASIL 125 (300)
Q Consensus 93 ~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~ 125 (300)
--|++.|.+ .++. .-=+++|.|||++=+.+
T Consensus 14 ~Gvl~al~e-~~~~--~fd~i~GtSaGAi~a~~ 43 (266)
T cd07208 14 AGVLDAFLE-AGIR--PFDLVIGVSAGALNAAS 43 (266)
T ss_pred HHHHHHHHH-cCCC--CCCEEEEECHHHHhHHH
Confidence 346677777 5665 23378999999965443
No 57
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=61.27 E-value=9.2 Score=32.84 Aligned_cols=30 Identities=33% Similarity=0.512 Sum_probs=21.9
Q ss_pred HHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 94 AVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 94 avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
-|++.|.+ +|+. --+++|+|||++-+.+.+
T Consensus 15 Gvl~aL~e-~gi~---~d~v~GtSaGAi~aa~~a 44 (172)
T cd07198 15 GVAKALRE-RGPL---IDIIAGTSAGAIVAALLA 44 (172)
T ss_pred HHHHHHHH-cCCC---CCEEEEECHHHHHHHHHH
Confidence 36677777 5765 668999999997665544
No 58
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=61.10 E-value=14 Score=34.85 Aligned_cols=42 Identities=17% Similarity=0.085 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHhhc--cCC-----CCCCeEEEeecChhHHHHHHhHHHH
Q 035542 89 ARVFLAVMKDLLTV--KGM-----INAQNAILSGCSAGGFASILYCDNF 130 (300)
Q Consensus 89 ~~i~~avl~~l~~~--~gl-----~~a~~vilsG~SAGG~g~~~~~d~v 130 (300)
-+.+.++++||.+. ..+ .+-+++-|+|+|+||-.++..+-..
T Consensus 64 ~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~ 112 (259)
T PF12740_consen 64 VASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGN 112 (259)
T ss_pred HHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhh
Confidence 34577888987762 112 2456899999999997766544443
No 59
>PRK10673 acyl-CoA esterase; Provisional
Probab=60.91 E-value=45 Score=29.16 Aligned_cols=36 Identities=25% Similarity=0.237 Sum_probs=22.5
Q ss_pred CCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccc
Q 035542 108 AQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAG 147 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG 147 (300)
.++++|.|+|.||.-++..+. ..|..++-.++.|++
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~----~~~~~v~~lvli~~~ 115 (255)
T PRK10673 80 IEKATFIGHSMGGKAVMALTA----LAPDRIDKLVAIDIA 115 (255)
T ss_pred CCceEEEEECHHHHHHHHHHH----hCHhhcceEEEEecC
Confidence 356999999999976654443 345444444444544
No 60
>PHA02857 monoglyceride lipase; Provisional
Probab=60.87 E-value=51 Score=29.53 Aligned_cols=20 Identities=15% Similarity=0.399 Sum_probs=16.6
Q ss_pred hhhhcCCCceEEeechhhHH
Q 035542 197 YVAGQVITPLFIINSAYDRW 216 (300)
Q Consensus 197 ~~~~~i~tP~Fi~~s~YD~w 216 (300)
..++.|+.|++|++..-|.+
T Consensus 203 ~~l~~i~~Pvliv~G~~D~i 222 (276)
T PHA02857 203 KIIPKIKTPILILQGTNNEI 222 (276)
T ss_pred HhcccCCCCEEEEecCCCCc
Confidence 35678899999999999963
No 61
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=60.62 E-value=42 Score=33.63 Aligned_cols=101 Identities=22% Similarity=0.310 Sum_probs=61.5
Q ss_pred CccEEEEecccceeCCccccc----------------------ccccccchHHHHHHHHHHHhhccCCCCCCeEEEeecC
Q 035542 60 INNWLVFVEGGGWCNDVTTCH----------------------GTNLHFREARVFLAVMKDLLTVKGMINAQNAILSGCS 117 (300)
Q Consensus 60 s~~wli~leGGG~C~~~~~C~----------------------~~~l~frG~~i~~avl~~l~~~~gl~~a~~vilsG~S 117 (300)
.++++|-+||-.-=+.. -|. +...-+.-.+-+.+|++....+.|++ .+++||-|.|
T Consensus 242 gq~LvIC~EGNAGFYEv-G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~-~edIilygWS 319 (517)
T KOG1553|consen 242 GQDLVICFEGNAGFYEV-GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFR-QEDIILYGWS 319 (517)
T ss_pred CceEEEEecCCccceEe-eeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCC-ccceEEEEee
Confidence 37999999995422221 122 23344455778888998888866664 5789999999
Q ss_pred hhHHHHHHhHHHHHhhCCCccEEEEeeccccccccCCCCchhHHHHHHHHHHH
Q 035542 118 AGGFASILYCDNFRALFPVGTRVKCLADAGFFINVKDISDASHIEEFFAQVVA 170 (300)
Q Consensus 118 AGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~~~~~ 170 (300)
-||+-+ -+.++.+| +++-. +-|+- |=|.-+. .-..|..+|.++|+
T Consensus 320 IGGF~~----~waAs~YP-dVkav-vLDAt-FDDllpL-Al~rMP~~~~giV~ 364 (517)
T KOG1553|consen 320 IGGFPV----AWAASNYP-DVKAV-VLDAT-FDDLLPL-ALFRMPTFFSGIVE 364 (517)
T ss_pred cCCchH----HHHhhcCC-CceEE-Eeecc-hhhhhhH-HhhhchHHHHHHHH
Confidence 999876 35667788 43322 23654 3232221 11235566776654
No 62
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=60.05 E-value=17 Score=35.05 Aligned_cols=116 Identities=14% Similarity=0.154 Sum_probs=52.7
Q ss_pred ccccchH-HHHHHHHHHHhhccCCC--CCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccccccCCC----
Q 035542 83 NLHFREA-RVFLAVMKDLLTVKGMI--NAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFINVKDI---- 155 (300)
Q Consensus 83 ~l~frG~-~i~~avl~~l~~~~gl~--~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~---- 155 (300)
+.|||+- ......++.|.+ ++ ++++|.++|.|-||.=|++- ..|.+.++ .++++--||=|.+..
T Consensus 149 ~~yyr~~~~D~~ravd~l~s---lpevD~~rI~v~G~SqGG~lal~~-----aaLd~rv~-~~~~~vP~l~d~~~~~~~~ 219 (320)
T PF05448_consen 149 DYYYRRVYLDAVRAVDFLRS---LPEVDGKRIGVTGGSQGGGLALAA-----AALDPRVK-AAAADVPFLCDFRRALELR 219 (320)
T ss_dssp T-HHHHHHHHHHHHHHHHHT---STTEEEEEEEEEEETHHHHHHHHH-----HHHSST-S-EEEEESESSSSHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHh---CCCcCcceEEEEeecCchHHHHHH-----HHhCcccc-EEEecCCCccchhhhhhcC
Confidence 3455542 223334566665 66 47899999999999555332 22332221 244454455443211
Q ss_pred --Cc-hhHHHHHHHHHHHhhccCccCCcccccccCCCCcCcchhhhhhcCCCceEEeechhhH
Q 035542 156 --SD-ASHIEEFFAQVVATHGSIKHLPASCTKRLNPAGLCFFPQYVAGQVITPLFIINSAYDR 215 (300)
Q Consensus 156 --~g-~~~~~~~~~~~~~l~~~~~~lp~~C~~~~~~~w~C~f~~~~~~~i~tP~Fi~~s~YD~ 215 (300)
.+ -..++.+++.. +..++.-.+-.+ ...=|=..++.+.|+.|+++--++.|.
T Consensus 220 ~~~~~y~~~~~~~~~~-------d~~~~~~~~v~~-~L~Y~D~~nfA~ri~~pvl~~~gl~D~ 274 (320)
T PF05448_consen 220 ADEGPYPEIRRYFRWR-------DPHHEREPEVFE-TLSYFDAVNFARRIKCPVLFSVGLQDP 274 (320)
T ss_dssp --STTTHHHHHHHHHH-------SCTHCHHHHHHH-HHHTT-HHHHGGG--SEEEEEEETT-S
T ss_pred CccccHHHHHHHHhcc-------CCCcccHHHHHH-HHhhhhHHHHHHHcCCCEEEEEecCCC
Confidence 11 12223333211 000111000000 001122456888999999999999994
No 63
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=59.66 E-value=18 Score=33.94 Aligned_cols=45 Identities=24% Similarity=0.389 Sum_probs=28.1
Q ss_pred EEEecccceeCCcccccccccccchHHHHHHHHHHHhhccCCCCCC--eEEEeecChhHHHHHH
Q 035542 64 LVFVEGGGWCNDVTTCHGTNLHFREARVFLAVMKDLLTVKGMINAQ--NAILSGCSAGGFASIL 125 (300)
Q Consensus 64 li~leGGG~C~~~~~C~~~~l~frG~~i~~avl~~l~~~~gl~~a~--~vilsG~SAGG~g~~~ 125 (300)
++-|+||| .|| .+--.+|+.|.+ ++ ++.. -=+++|.||||+-+..
T Consensus 4 iLsLdGGG--------------~RG-i~~~~vL~~Le~-~~-~~~~~~fD~i~GTSaGaiia~~ 50 (288)
T cd07213 4 ILSLDGGG--------------VKG-IVQLVLLKRLAE-EF-PSFLDQIDLFAGTSAGSLIALG 50 (288)
T ss_pred EEEECCCc--------------HHH-HHHHHHHHHHHH-hC-cccccceeEEEEeCHHHHHHHH
Confidence 67788887 356 333456677777 33 2211 2279999999965543
No 64
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=58.85 E-value=22 Score=36.04 Aligned_cols=55 Identities=18% Similarity=0.088 Sum_probs=34.3
Q ss_pred HHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCc-cEEEEeeccccccc
Q 035542 92 FLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVG-TRVKCLADAGFFIN 151 (300)
Q Consensus 92 ~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~-~~v~~l~DSG~Fld 151 (300)
+.+.|+.|.+..++ ..++|.|.|+|.||.-+..-.. +.|.. .++.+|.=+|.++.
T Consensus 103 la~lI~~L~~~~gl-~l~~VhLIGHSLGAhIAg~ag~----~~p~rV~rItgLDPAgP~F~ 158 (442)
T TIGR03230 103 VAKFVNWMQEEFNY-PWDNVHLLGYSLGAHVAGIAGS----LTKHKVNRITGLDPAGPTFE 158 (442)
T ss_pred HHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHHH----hCCcceeEEEEEcCCCCccc
Confidence 45566776653344 5689999999999976655433 34432 24555555666554
No 65
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=58.62 E-value=25 Score=31.55 Aligned_cols=55 Identities=16% Similarity=0.241 Sum_probs=36.3
Q ss_pred HHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeecccccc
Q 035542 91 VFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFI 150 (300)
Q Consensus 91 i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fl 150 (300)
-++.++++|.+ +.--++++|-|.|.|-||--|++ ++..+|.=..|..++.|+++.
T Consensus 5 yfe~Ai~~L~~-~p~v~~~~Igi~G~SkGaelALl----lAs~~~~i~avVa~~ps~~~~ 59 (213)
T PF08840_consen 5 YFEEAIDWLKS-HPEVDPDKIGIIGISKGAELALL----LASRFPQISAVVAISPSSVVF 59 (213)
T ss_dssp HHHHHHHHHHC-STTB--SSEEEEEETHHHHHHHH----HHHHSSSEEEEEEES--SB--
T ss_pred HHHHHHHHHHh-CCCCCCCCEEEEEECHHHHHHHH----HHhcCCCccEEEEeCCceeEe
Confidence 47889999998 44445789999999999977765 455666433466777777655
No 66
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=58.30 E-value=14 Score=33.64 Aligned_cols=34 Identities=24% Similarity=0.355 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhcc--CCCCCCeEEEeecChhHHHHH
Q 035542 91 VFLAVMKDLLTVK--GMINAQNAILSGCSAGGFASI 124 (300)
Q Consensus 91 i~~avl~~l~~~~--gl~~a~~vilsG~SAGG~g~~ 124 (300)
-+...++++++.+ .....++|+|.|+|.||+-+-
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar 100 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVAR 100 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHH
Confidence 3444555555521 357899999999999998653
No 67
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=58.03 E-value=6.6 Score=33.34 Aligned_cols=10 Identities=40% Similarity=0.747 Sum_probs=9.0
Q ss_pred EEEeecChhH
Q 035542 111 AILSGCSAGG 120 (300)
Q Consensus 111 vilsG~SAGG 120 (300)
+++.|.|||+
T Consensus 70 ~vi~G~SAGA 79 (154)
T PF03575_consen 70 GVIIGTSAGA 79 (154)
T ss_dssp SEEEEETHHH
T ss_pred CEEEEEChHH
Confidence 6888999999
No 68
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=56.46 E-value=23 Score=31.58 Aligned_cols=35 Identities=26% Similarity=0.477 Sum_probs=21.8
Q ss_pred HHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCC
Q 035542 94 AVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFP 135 (300)
Q Consensus 94 avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp 135 (300)
+.++.+.+. .. ++.++|.|+|.||+-|. +++++++
T Consensus 47 ~~l~~~i~~--~~-~~~~~liGSSlGG~~A~----~La~~~~ 81 (187)
T PF05728_consen 47 AQLEQLIEE--LK-PENVVLIGSSLGGFYAT----YLAERYG 81 (187)
T ss_pred HHHHHHHHh--CC-CCCeEEEEEChHHHHHH----HHHHHhC
Confidence 444445441 22 33399999999996664 4566665
No 69
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=56.26 E-value=83 Score=27.21 Aligned_cols=19 Identities=11% Similarity=0.277 Sum_probs=15.4
Q ss_pred hhhhcCCCceEEeechhhH
Q 035542 197 YVAGQVITPLFIINSAYDR 215 (300)
Q Consensus 197 ~~~~~i~tP~Fi~~s~YD~ 215 (300)
..++.|+.|+++++...|.
T Consensus 225 ~~l~~i~~P~lii~G~~D~ 243 (288)
T TIGR01250 225 DKLSEIKVPTLLTVGEFDT 243 (288)
T ss_pred HHhhccCCCEEEEecCCCc
Confidence 3567889999999988884
No 70
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=55.92 E-value=33 Score=32.03 Aligned_cols=50 Identities=20% Similarity=0.196 Sum_probs=28.5
Q ss_pred HHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeec
Q 035542 91 VFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLAD 145 (300)
Q Consensus 91 i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~D 145 (300)
-+.++++.|....... ..+++|.|+|.||.-++.. ....|..++-.++..
T Consensus 117 D~~~~i~~l~~~~~~~-~~~i~l~GhSmGG~ia~~~----a~~~p~~v~~lvl~~ 166 (330)
T PLN02298 117 DCLSFFNSVKQREEFQ-GLPRFLYGESMGGAICLLI----HLANPEGFDGAVLVA 166 (330)
T ss_pred HHHHHHHHHHhcccCC-CCCEEEEEecchhHHHHHH----HhcCcccceeEEEec
Confidence 3556667665421122 2469999999999776543 334564444333333
No 71
>PRK00870 haloalkane dehalogenase; Provisional
Probab=55.81 E-value=1.1e+02 Score=28.06 Aligned_cols=37 Identities=19% Similarity=0.216 Sum_probs=23.7
Q ss_pred CCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeecccc
Q 035542 108 AQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGF 148 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~ 148 (300)
.++|+|.|+|.||.=+..-+ ...|..++-.++.|++.
T Consensus 114 ~~~v~lvGhS~Gg~ia~~~a----~~~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 114 LTDVTLVCQDWGGLIGLRLA----AEHPDRFARLVVANTGL 150 (302)
T ss_pred CCCEEEEEEChHHHHHHHHH----HhChhheeEEEEeCCCC
Confidence 35799999999996554333 33455455455566654
No 72
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=54.77 E-value=42 Score=27.59 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=25.3
Q ss_pred CeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeecccccc
Q 035542 109 QNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFI 150 (300)
Q Consensus 109 ~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fl 150 (300)
++++|.|+|.||.-++..+ ...|..++-.++.+++...
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a----~~~p~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLA----ARYPDRVKGLVLLSPPPPL 103 (228)
T ss_dssp SSEEEEEETHHHHHHHHHH----HHSGGGEEEEEEESESSSH
T ss_pred ccccccccccccccccccc----cccccccccceeecccccc
Confidence 6899999999997765554 3355444444555665543
No 73
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=54.16 E-value=34 Score=31.45 Aligned_cols=24 Identities=29% Similarity=0.425 Sum_probs=18.1
Q ss_pred CCCCCeEEEeecChhHHHHHHhHH
Q 035542 105 MINAQNAILSGCSAGGFASILYCD 128 (300)
Q Consensus 105 l~~a~~vilsG~SAGG~g~~~~~d 128 (300)
+...++++|.|+|.||+-+...+.
T Consensus 83 l~~~~~v~lvGhS~GG~v~~~~a~ 106 (273)
T PLN02211 83 LPENEKVILVGHSAGGLSVTQAIH 106 (273)
T ss_pred cCCCCCEEEEEECchHHHHHHHHH
Confidence 434589999999999986655543
No 74
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=54.09 E-value=33 Score=32.11 Aligned_cols=63 Identities=25% Similarity=0.263 Sum_probs=38.4
Q ss_pred ccchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHH--hhCCCccEEEEeecccccccc
Q 035542 85 HFREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFR--ALFPVGTRVKCLADAGFFINV 152 (300)
Q Consensus 85 ~frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~--~~lp~~~~v~~l~DSG~Fld~ 152 (300)
+.+-..=+++||..|.+.++ -+++-+.|+|.||++++.+.-.-. ..+|+- -+++.=+|.|-..
T Consensus 82 ~~~qa~wl~~vl~~L~~~Y~---~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l--~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 82 YKKQAKWLKKVLKYLKKKYH---FKKFNLVGHSMGGLSWTYYLENYGNDKNLPKL--NKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHHHHHHHHHHCC-----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EE--EEEEEES--TTTT
T ss_pred HHHHHHHHHHHHHHHHHhcC---CCEEeEEEECccHHHHHHHHHHhccCCCCccc--ceEEEeccccCcc
Confidence 33445667889999988544 578899999999999875544332 235632 3455556666433
No 75
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=53.25 E-value=27 Score=29.92 Aligned_cols=20 Identities=15% Similarity=0.325 Sum_probs=15.8
Q ss_pred CCeEEEeecChhHHHHHHhH
Q 035542 108 AQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~ 127 (300)
.++++|.|+|.||.-++..+
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a 98 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLA 98 (257)
T ss_pred CCcEEEEEechhHHHHHHHH
Confidence 46799999999997666544
No 76
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=52.61 E-value=14 Score=34.13 Aligned_cols=31 Identities=26% Similarity=0.379 Sum_probs=21.4
Q ss_pred HHHHHhhccCCCCCCeE-EEeecChhHHHHHHh
Q 035542 95 VMKDLLTVKGMINAQNA-ILSGCSAGGFASILY 126 (300)
Q Consensus 95 vl~~l~~~~gl~~a~~v-ilsG~SAGG~g~~~~ 126 (300)
|++.|.+ +|..--+++ .++|+|||++-+...
T Consensus 17 Vl~~L~e-~g~~l~~~~~~i~GtSaGAl~aa~~ 48 (246)
T cd07222 17 AAKALLR-HGKKLLKRVKRFAGASAGSLVAAVL 48 (246)
T ss_pred HHHHHHH-cCchhhccCCEEEEECHHHHHHHHH
Confidence 6677777 566423333 799999999776655
No 77
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=52.35 E-value=15 Score=33.78 Aligned_cols=31 Identities=26% Similarity=0.266 Sum_probs=21.0
Q ss_pred HHHHHhhccCCCCCCe-EEEeecChhHHHHHHh
Q 035542 95 VMKDLLTVKGMINAQN-AILSGCSAGGFASILY 126 (300)
Q Consensus 95 vl~~l~~~~gl~~a~~-vilsG~SAGG~g~~~~ 126 (300)
|++.|.+ +|..-..+ -.++|+|||++-+...
T Consensus 17 Vl~~L~e-~g~~l~~~~~~i~GtSAGAl~aa~~ 48 (243)
T cd07204 17 VASALRE-HAPRLLQNARRIAGASAGAIVAAVV 48 (243)
T ss_pred HHHHHHH-cCcccccCCCEEEEEcHHHHHHHHH
Confidence 6677777 56543232 5899999999766543
No 78
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=52.31 E-value=13 Score=37.31 Aligned_cols=53 Identities=15% Similarity=0.255 Sum_probs=31.4
Q ss_pred CccEEEEecccceeCCcccccccccccchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 60 INNWLVFVEGGGWCNDVTTCHGTNLHFREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 60 s~~wli~leGGG~C~~~~~C~~~~l~frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
..+|-+-|.|||+ ..+||-|- +++..+.- . .-+.++ --++|.|||++.+.+++
T Consensus 7 ~~~~~LsfSGgGf---------lG~yHvGV--~~~L~e~~-p-~ll~~~--~~iaGaSAGAL~aa~~a 59 (405)
T cd07223 7 EGGWNLSFSGAGY---------LGLYHVGV--TECLRQRA-P-RLLQGA--RRIYGSSSGALNAVSIV 59 (405)
T ss_pred CCCEEEEEeCcHH---------HHHHHHHH--HHHHHHhC-c-hhhccC--CeeeeeCHHHHHHHHHH
Confidence 4578899999874 46666662 33333321 1 012222 34899999998876544
No 79
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=52.09 E-value=23 Score=32.94 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=19.0
Q ss_pred HHHHHhhccCCCCC-CeEEEeecChhHHHHHHhH
Q 035542 95 VMKDLLTVKGMINA-QNAILSGCSAGGFASILYC 127 (300)
Q Consensus 95 vl~~l~~~~gl~~a-~~vilsG~SAGG~g~~~~~ 127 (300)
|++-|.+ ++..=- +--.++|.|||++.+...+
T Consensus 18 Vl~aL~e-~~~~l~~~~~~i~GtSAGAl~aa~~a 50 (252)
T cd07221 18 VTRCLSE-RAPHLLRDARMFFGASAGALHCVTFL 50 (252)
T ss_pred HHHHHHH-hCcchhccCCEEEEEcHHHHHHHHHH
Confidence 5555655 332111 1346899999997766553
No 80
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=51.69 E-value=16 Score=33.79 Aligned_cols=30 Identities=30% Similarity=0.182 Sum_probs=18.7
Q ss_pred HHHHHhhccCCCCCCeEEEeecChhHHHHHHh
Q 035542 95 VMKDLLTVKGMINAQNAILSGCSAGGFASILY 126 (300)
Q Consensus 95 vl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~ 126 (300)
|++.|.+ ++..-... .++|+|||++-+...
T Consensus 18 Vl~aL~e-~g~~~~~d-~i~GtSAGAl~aa~~ 47 (245)
T cd07218 18 VAVCLKK-YAPHLLLN-KISGASAGALAACCL 47 (245)
T ss_pred HHHHHHH-hCcccCCC-eEEEEcHHHHHHHHH
Confidence 5566666 45321112 399999999776654
No 81
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=50.49 E-value=34 Score=31.35 Aligned_cols=38 Identities=18% Similarity=0.155 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 88 EARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 88 G~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
-..-..++|+|+.. ... ...+|-+.|+|.+|+.+++-+
T Consensus 82 e~~D~~d~I~W~~~-Qpw-s~G~VGm~G~SY~G~~q~~~A 119 (272)
T PF02129_consen 82 EAQDGYDTIEWIAA-QPW-SNGKVGMYGISYGGFTQWAAA 119 (272)
T ss_dssp HHHHHHHHHHHHHH-CTT-EEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-CCC-CCCeEEeeccCHHHHHHHHHH
Confidence 35567789999998 333 235899999999998875543
No 82
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=49.97 E-value=32 Score=32.96 Aligned_cols=48 Identities=29% Similarity=0.506 Sum_probs=32.1
Q ss_pred ccEEEEecccceeCCcccccccccccchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 61 NNWLVFVEGGGWCNDVTTCHGTNLHFREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 61 ~~wli~leGGG~C~~~~~C~~~~l~frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
++.-+-|+|||. +.++| --||+.|.+ .|++ --+++|+|||++=+.+++
T Consensus 14 ~~~gLvL~GGG~---------RG~ah------iGvL~aLee-~gi~---~d~v~GtSaGAi~ga~ya 61 (306)
T cd07225 14 NSIALVLGGGGA---------RGCAH------IGVIKALEE-AGIP---VDMVGGTSIGAFIGALYA 61 (306)
T ss_pred CCEEEEECChHH---------HHHHH------HHHHHHHHH-cCCC---CCEEEEECHHHHHHHHHH
Confidence 567888999972 22222 236777777 5774 468999999996544443
No 83
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=49.84 E-value=52 Score=35.63 Aligned_cols=29 Identities=7% Similarity=-0.177 Sum_probs=21.2
Q ss_pred CCCcCcchhhhhhcCCCceEEeechhhHH
Q 035542 188 PAGLCFFPQYVAGQVITPLFIINSAYDRW 216 (300)
Q Consensus 188 ~~w~C~f~~~~~~~i~tP~Fi~~s~YD~w 216 (300)
+.|+=.=+-.-+..|+.|+|+++..+|..
T Consensus 440 ~fW~~rn~~~~~~kIkvPvLlIhGw~D~~ 468 (767)
T PRK05371 440 DFWDDRNYLKDADKIKASVLVVHGLNDWN 468 (767)
T ss_pred HHHHhCCHhhHhhCCCCCEEEEeeCCCCC
Confidence 33544444455678999999999999975
No 84
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=49.01 E-value=27 Score=30.66 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHH
Q 035542 90 RVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASIL 125 (300)
Q Consensus 90 ~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~ 125 (300)
..+++.+++|.+ ..-...++|-+.|.|.||.-++.
T Consensus 80 ~~~~aa~~~l~~-~~~~~~~kig~vGfc~GG~~a~~ 114 (218)
T PF01738_consen 80 ADLQAAVDYLRA-QPEVDPGKIGVVGFCWGGKLALL 114 (218)
T ss_dssp HHHHHHHHHHHC-TTTCEEEEEEEEEETHHHHHHHH
T ss_pred HHHHHHHHHHHh-ccccCCCcEEEEEEecchHHhhh
Confidence 445667888877 34347889999999999987764
No 85
>PLN02324 triacylglycerol lipase
Probab=48.82 E-value=52 Score=33.26 Aligned_cols=34 Identities=26% Similarity=0.290 Sum_probs=21.9
Q ss_pred HHHhhccCCCCC-CeEEEeecChhHHHHHHhHHHHHh
Q 035542 97 KDLLTVKGMINA-QNAILSGCSAGGFASILYCDNFRA 132 (300)
Q Consensus 97 ~~l~~~~gl~~a-~~vilsG~SAGG~g~~~~~d~v~~ 132 (300)
..|++ ..++. .+|+++|+|-||-=|.+.+-++..
T Consensus 204 ~~L~~--~Yp~e~~sItvTGHSLGGALAtLaA~dl~~ 238 (415)
T PLN02324 204 KRLLE--LYKNEEISITFTGHSLGAVMSVLSAADLVY 238 (415)
T ss_pred HHHHH--HCCCCCceEEEecCcHHHHHHHHHHHHHHH
Confidence 34444 24443 379999999999666666655544
No 86
>COG0627 Predicted esterase [General function prediction only]
Probab=48.36 E-value=46 Score=32.23 Aligned_cols=110 Identities=17% Similarity=0.303 Sum_probs=57.7
Q ss_pred ccceEEeecCCCCCCcccCCCCCceeeecCCC--CCCccEEEEec-----------------ccceeCCccccccccccc
Q 035542 26 SVPITYVENGVVEGAVCLDCSPPTYHFDKGFG--AGINNWLVFVE-----------------GGGWCNDVTTCHGTNLHF 86 (300)
Q Consensus 26 ~v~ltll~~a~~~ga~ClDGSp~~yy~~~g~g--~gs~~wli~le-----------------GGG~C~~~~~C~~~~l~f 86 (300)
++++-++.. |..|.. +.+|.+-|-+ ....+|+|-.. ||+.-+-.+.-... +.
T Consensus 53 ~ipV~~~l~----G~t~~~---~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~--~~ 123 (316)
T COG0627 53 DIPVLYLLS----GLTCNE---PNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPP--WA 123 (316)
T ss_pred CCCEEEEeC----CCCCCC---CceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCc--cc
Confidence 344444443 556655 7888876633 34567887775 66555433221111 12
Q ss_pred ch-HHHHHHHHHHHhhc--cCCCCC---CeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccc
Q 035542 87 RE-ARVFLAVMKDLLTV--KGMINA---QNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFF 149 (300)
Q Consensus 87 rG-~~i~~avl~~l~~~--~gl~~a---~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~F 149 (300)
.| ++--..++++|-.. +.++.. ++--++|.|.||.||+..+-+--+++ -.+.+.||+.
T Consensus 124 ~~~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f-----~~~sS~Sg~~ 187 (316)
T COG0627 124 SGPYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRF-----KSASSFSGIL 187 (316)
T ss_pred cCccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchh-----ceeccccccc
Confidence 22 22222233333310 124422 37889999999999988444333334 3455667754
No 87
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=48.26 E-value=34 Score=28.65 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=17.5
Q ss_pred CCCeEEEeecChhHHHHHHhHHH
Q 035542 107 NAQNAILSGCSAGGFASILYCDN 129 (300)
Q Consensus 107 ~a~~vilsG~SAGG~g~~~~~d~ 129 (300)
..++++|.|.|.||.-++..+..
T Consensus 68 ~~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 68 GIEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred CCCeEEEEEeccHHHHHHHHHHh
Confidence 35689999999999777655543
No 88
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=47.74 E-value=31 Score=32.62 Aligned_cols=14 Identities=36% Similarity=0.885 Sum_probs=11.1
Q ss_pred EEeecChhHHHHHH
Q 035542 112 ILSGCSAGGFASIL 125 (300)
Q Consensus 112 ilsG~SAGG~g~~~ 125 (300)
+++|.|+||+=|..
T Consensus 45 li~GTStGgiiA~~ 58 (309)
T cd07216 45 LIGGTSTGGLIAIM 58 (309)
T ss_pred eeeeccHHHHHHHH
Confidence 79999999965543
No 89
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=47.60 E-value=1.4e+02 Score=30.53 Aligned_cols=103 Identities=12% Similarity=0.095 Sum_probs=69.2
Q ss_pred CCCCceeeecCCC-CCCccEEEEecccceeCCccccc------------------------------------------c
Q 035542 45 CSPPTYHFDKGFG-AGINNWLVFVEGGGWCNDVTTCH------------------------------------------G 81 (300)
Q Consensus 45 GSp~~yy~~~g~g-~gs~~wli~leGGG~C~~~~~C~------------------------------------------~ 81 (300)
|..-.|||-+... .-.+-+||.|.||=-|-+..--. +
T Consensus 56 ~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~ 135 (454)
T KOG1282|consen 56 GRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSN 135 (454)
T ss_pred CceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccC
Confidence 6666788877632 12345999999999998743111 1
Q ss_pred ccccc------chHHHHHHHHHHHhhccCCC--CCCeEEEeecChhHHHHHHhHHHHHhhCC----CccEEEEeeccccc
Q 035542 82 TNLHF------REARVFLAVMKDLLTVKGMI--NAQNAILSGCSAGGFASILYCDNFRALFP----VGTRVKCLADAGFF 149 (300)
Q Consensus 82 ~~l~f------rG~~i~~avl~~l~~~~gl~--~a~~vilsG~SAGG~g~~~~~d~v~~~lp----~~~~v~~l~DSG~F 149 (300)
++... ..+++..++++|+.+ +| +.+...++|.|-+|.-+..-++.|.+.=. +.+.+++++=.=-.
T Consensus 136 ~~~~~~~~D~~~A~d~~~FL~~wf~k---fPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~ 212 (454)
T KOG1282|consen 136 TSSDYKTGDDGTAKDNYEFLQKWFEK---FPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGL 212 (454)
T ss_pred CCCcCcCCcHHHHHHHHHHHHHHHHh---ChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcc
Confidence 22111 238889999999887 45 36799999999999888888888877532 24667776654333
Q ss_pred c
Q 035542 150 I 150 (300)
Q Consensus 150 l 150 (300)
+
T Consensus 213 t 213 (454)
T KOG1282|consen 213 T 213 (454)
T ss_pred c
Confidence 3
No 90
>PLN02310 triacylglycerol lipase
Probab=46.65 E-value=60 Score=32.68 Aligned_cols=52 Identities=15% Similarity=0.155 Sum_probs=32.1
Q ss_pred CCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccccccCCCCchhHHHHHHH
Q 035542 108 AQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFFINVKDISDASHIEEFFA 166 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~ 166 (300)
..+|+++|+|-||-=|.+.+..++...+ ...|.++.=++ +--|+..+.++++
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~dl~~~~~-~~~v~vyTFGs------PRVGN~~Fa~~~~ 259 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYEAATTIP-DLFVSVISFGA------PRVGNIAFKEKLN 259 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHHHHHhCc-CcceeEEEecC------CCcccHHHHHHHH
Confidence 3589999999999666667777776665 23455544443 2235544444444
No 91
>PRK11460 putative hydrolase; Provisional
Probab=46.50 E-value=28 Score=31.34 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=22.4
Q ss_pred HHHHHHHhhccCCCCCCeEEEeecChhHHHHHH
Q 035542 93 LAVMKDLLTVKGMINAQNAILSGCSAGGFASIL 125 (300)
Q Consensus 93 ~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~ 125 (300)
.+.++++....+. +.++|+|.|.|.||.-++.
T Consensus 88 ~~~i~~~~~~~~~-~~~~i~l~GfS~Gg~~al~ 119 (232)
T PRK11460 88 IETVRYWQQQSGV-GASATALIGFSQGAIMALE 119 (232)
T ss_pred HHHHHHHHHhcCC-ChhhEEEEEECHHHHHHHH
Confidence 3455555553343 4679999999999987764
No 92
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=46.06 E-value=25 Score=34.14 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=23.7
Q ss_pred HHHHHHHHHhhccCCCCCCeEEEeecChhHH
Q 035542 91 VFLAVMKDLLTVKGMINAQNAILSGCSAGGF 121 (300)
Q Consensus 91 i~~avl~~l~~~~gl~~a~~vilsG~SAGG~ 121 (300)
-+++.++.|..++++ ++.+|+++|.|+||.
T Consensus 127 flr~lva~l~~~~gi-dp~RVyvtGlS~GG~ 156 (312)
T COG3509 127 FLRALVAKLVNEYGI-DPARVYVTGLSNGGR 156 (312)
T ss_pred HHHHHHHHHHHhcCc-CcceEEEEeeCcHHH
Confidence 467788888885444 578999999999994
No 93
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=46.00 E-value=45 Score=32.35 Aligned_cols=55 Identities=20% Similarity=0.225 Sum_probs=38.0
Q ss_pred HHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHh--hCCCccEEEEeeccccccccC
Q 035542 95 VMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRA--LFPVGTRVKCLADAGFFINVK 153 (300)
Q Consensus 95 vl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~--~lp~~~~v~~l~DSG~Fld~~ 153 (300)
.|+.|..+.|++ .++|-|.|+|-||--+-+-..++.. .++ +|.+|.=||.+++..
T Consensus 137 ~l~~L~~~~g~~-~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~---rItgLDPAgP~F~~~ 193 (331)
T PF00151_consen 137 FLSFLINNFGVP-PENIHLIGHSLGAHVAGFAGKYLKGGGKIG---RITGLDPAGPLFENN 193 (331)
T ss_dssp HHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT---SS---EEEEES-B-TTTTTS
T ss_pred HHHHHHhhcCCC-hhHEEEEeeccchhhhhhhhhhccCcceee---EEEecCcccccccCC
Confidence 456666434554 7899999999999888777777777 554 799999999887654
No 94
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=45.92 E-value=69 Score=29.38 Aligned_cols=55 Identities=9% Similarity=0.033 Sum_probs=39.5
Q ss_pred chHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCC---CccEEEEeecc
Q 035542 87 REARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFP---VGTRVKCLADA 146 (300)
Q Consensus 87 rG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp---~~~~v~~l~DS 146 (300)
.|..++.+.|+... ...+.|++.|.|.|+.-+-....++.+.-. ...++..+.|-
T Consensus 31 ~G~~~L~~ai~~~~-----~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 31 EGVANLDAAIRAAI-----AAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred HHHHHHHHHHHhhc-----cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 56677777776533 357789999999999988888888877432 24567777664
No 95
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=45.23 E-value=1.9e+02 Score=29.29 Aligned_cols=37 Identities=19% Similarity=0.089 Sum_probs=25.8
Q ss_pred CCeEEEeecChhHHHHHHhHHHHHhhCC----CccEEEEee
Q 035542 108 AQNAILSGCSAGGFASILYCDNFRALFP----VGTRVKCLA 144 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d~v~~~lp----~~~~v~~l~ 144 (300)
...+.|+|.|.||.=+..-+.+|.+.-. ..++++++.
T Consensus 170 ~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~ 210 (462)
T PTZ00472 170 ANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLA 210 (462)
T ss_pred CCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEE
Confidence 4789999999999777777777754321 135566655
No 96
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=44.98 E-value=39 Score=33.79 Aligned_cols=48 Identities=25% Similarity=0.486 Sum_probs=31.0
Q ss_pred cEEEEecccceeCCcccccccccccchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHH
Q 035542 62 NWLVFVEGGGWCNDVTTCHGTNLHFREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCD 128 (300)
Q Consensus 62 ~wli~leGGG~C~~~~~C~~~~l~frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d 128 (300)
+.-+-|+||| .||. ----|++-|.+ .|+. ++ +++|.|||++-+.+.+-
T Consensus 67 rtALvLsGGG--------------~rG~-~h~GVlkaL~e-~gll-p~--iI~GtSAGAivaalla~ 114 (407)
T cd07232 67 RTALCLSGGA--------------AFAY-YHFGVVKALLD-ADLL-PN--VISGTSGGSLVAALLCT 114 (407)
T ss_pred CEEEEECCcH--------------HHHH-HHHHHHHHHHh-CCCC-CC--EEEEECHHHHHHHHHHc
Confidence 5788999997 2342 12246677777 4643 22 59999999966555443
No 97
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=44.66 E-value=44 Score=33.41 Aligned_cols=51 Identities=18% Similarity=0.152 Sum_probs=30.6
Q ss_pred CccEEEEecccceeCCcccccccccccchHHHHHHHHHHHhhccCCCCC-CeEEEeecChhHHHHHHh
Q 035542 60 INNWLVFVEGGGWCNDVTTCHGTNLHFREARVFLAVMKDLLTVKGMINA-QNAILSGCSAGGFASILY 126 (300)
Q Consensus 60 s~~wli~leGGG~C~~~~~C~~~~l~frG~~i~~avl~~l~~~~gl~~a-~~vilsG~SAGG~g~~~~ 126 (300)
..+|=+-|+|||+ ..+||-| |++.|.+ ++..-- .--.++|.|||++.+.+.
T Consensus 10 ~~~~gLvFsGGGf---------rGiYHvG------Vl~aL~E-~gp~ll~~~d~IaGtSAGALvAAl~ 61 (382)
T cd07219 10 DTPHSISFSGSGF---------LSFYQAG------VVDALRD-LAPRMLETAHRVAGTSAGSVIAALV 61 (382)
T ss_pred CCCceEEEcCcHH---------HHHHHHH------HHHHHHh-cCCcccccCCeEEEEcHHHHHHHHH
Confidence 4689999999983 2334333 4555555 232100 122489999999765544
No 98
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=43.87 E-value=50 Score=30.95 Aligned_cols=30 Identities=20% Similarity=0.235 Sum_probs=20.9
Q ss_pred HHHHHHHhhccCCCCCCeEEEeecChhHHHHHHh
Q 035542 93 LAVMKDLLTVKGMINAQNAILSGCSAGGFASILY 126 (300)
Q Consensus 93 ~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~ 126 (300)
.+++++|.+ .+ .++|+|.|.|.||.=++..
T Consensus 87 ~~ai~~L~~-~~---~~~v~LvG~SmGG~vAl~~ 116 (266)
T TIGR03101 87 AAAYRWLIE-QG---HPPVTLWGLRLGALLALDA 116 (266)
T ss_pred HHHHHHHHh-cC---CCCEEEEEECHHHHHHHHH
Confidence 345556655 22 5789999999999776543
No 99
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=43.00 E-value=55 Score=28.74 Aligned_cols=35 Identities=23% Similarity=0.126 Sum_probs=22.0
Q ss_pred CCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeecc
Q 035542 108 AQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADA 146 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DS 146 (300)
.++++|.|.|.||.-++..+ ...|..++..++.++
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a----~~~p~~v~~~v~~~~ 128 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLA----LDGPVTPRMVVGINA 128 (278)
T ss_pred CCCceEEEECccHHHHHHHH----HhCCcccceEEEEcC
Confidence 36789999999998776554 345543443333443
No 100
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=42.91 E-value=58 Score=32.64 Aligned_cols=47 Identities=19% Similarity=0.319 Sum_probs=30.1
Q ss_pred HHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccc
Q 035542 95 VMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFF 149 (300)
Q Consensus 95 vl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~F 149 (300)
++|+|.+ ...-++++|-++|.|.||+=++ +...|.+ +|++.+=+||+
T Consensus 213 ~lDfL~s-lpeVD~~RIG~~GfSmGg~~a~-----~LaALDd--RIka~v~~~~l 259 (390)
T PF12715_consen 213 ALDFLAS-LPEVDPDRIGCMGFSMGGYRAW-----WLAALDD--RIKATVANGYL 259 (390)
T ss_dssp HHHHHCT--TTEEEEEEEEEEEGGGHHHHH-----HHHHH-T--T--EEEEES-B
T ss_pred HHHHHhc-CcccCccceEEEeecccHHHHH-----HHHHcch--hhHhHhhhhhh
Confidence 6788877 4445688999999999997763 3444543 45566556665
No 101
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=42.73 E-value=47 Score=27.93 Aligned_cols=50 Identities=16% Similarity=0.171 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeecccc
Q 035542 91 VFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGF 148 (300)
Q Consensus 91 i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~ 148 (300)
.++.+.+++... +. +++.|.|.|.||.-++.-+. ..|..++-.++.+++.
T Consensus 51 ~~~~~~~~~~~~--~~--~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~~il~~~~~ 100 (245)
T TIGR01738 51 SLADAAEAIAAQ--AP--DPAIWLGWSLGGLVALHIAA----THPDRVRALVTVASSP 100 (245)
T ss_pred CHHHHHHHHHHh--CC--CCeEEEEEcHHHHHHHHHHH----HCHHhhheeeEecCCc
Confidence 466677777662 22 68999999999976654332 3443333334445543
No 102
>PLN02965 Probable pheophorbidase
Probab=42.44 E-value=73 Score=28.40 Aligned_cols=34 Identities=24% Similarity=0.196 Sum_probs=21.8
Q ss_pred CeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeecc
Q 035542 109 QNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADA 146 (300)
Q Consensus 109 ~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DS 146 (300)
++++|.|+|.||.=+...+ ...|+.++-.++.++
T Consensus 72 ~~~~lvGhSmGG~ia~~~a----~~~p~~v~~lvl~~~ 105 (255)
T PLN02965 72 HKVILVGHSIGGGSVTEAL----CKFTDKISMAIYVAA 105 (255)
T ss_pred CCEEEEecCcchHHHHHHH----HhCchheeEEEEEcc
Confidence 6899999999997444333 344655544444454
No 103
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=42.26 E-value=21 Score=35.25 Aligned_cols=17 Identities=29% Similarity=0.387 Sum_probs=14.9
Q ss_pred CCeEEEeecChhHHHHH
Q 035542 108 AQNAILSGCSAGGFASI 124 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~ 124 (300)
.++|.++|+|-||..++
T Consensus 227 ~~~i~~~GHSFGGATa~ 243 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATAL 243 (379)
T ss_dssp EEEEEEEEETHHHHHHH
T ss_pred hhheeeeecCchHHHHH
Confidence 56899999999997776
No 104
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=41.94 E-value=46 Score=28.07 Aligned_cols=38 Identities=24% Similarity=0.339 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHH
Q 035542 89 ARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDN 129 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~ 129 (300)
..-+.+.++.+++..|.++ +.+.|.|.||.=++..+..
T Consensus 27 ~~~~~~~~~~~~~~l~~~~---~~~vG~S~Gg~~~~~~a~~ 64 (230)
T PF00561_consen 27 TDDLAADLEALREALGIKK---INLVGHSMGGMLALEYAAQ 64 (230)
T ss_dssp HHHHHHHHHHHHHHHTTSS---EEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCC---eEEEEECCChHHHHHHHHH
Confidence 3445555566666444443 9999999999777655544
No 105
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=41.34 E-value=24 Score=32.67 Aligned_cols=12 Identities=33% Similarity=0.302 Sum_probs=10.1
Q ss_pred eEEEeecChhHH
Q 035542 110 NAILSGCSAGGF 121 (300)
Q Consensus 110 ~vilsG~SAGG~ 121 (300)
-+++.|.|||+.
T Consensus 113 G~~~~G~SAGAi 124 (233)
T PRK05282 113 GTPYIGWSAGAN 124 (233)
T ss_pred CCEEEEECHHHH
Confidence 478999999994
No 106
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=40.99 E-value=39 Score=34.23 Aligned_cols=33 Identities=27% Similarity=0.228 Sum_probs=23.9
Q ss_pred HHHHHHHHhhc---cCCCCCCeEEEeecChhHHHHHH
Q 035542 92 FLAVMKDLLTV---KGMINAQNAILSGCSAGGFASIL 125 (300)
Q Consensus 92 ~~avl~~l~~~---~gl~~a~~vilsG~SAGG~g~~~ 125 (300)
..+.|+|+..+ .| .++++|.|.|.||||..+-+
T Consensus 176 q~~AL~wv~~~I~~FG-Gdp~~vTl~G~saGa~~v~~ 211 (545)
T KOG1516|consen 176 QLLALRWVKDNIPSFG-GDPKNVTLFGHSAGAASVSL 211 (545)
T ss_pred HHHHHHHHHHHHHhcC-CCCCeEEEEeechhHHHHHH
Confidence 34556666553 33 58999999999999977644
No 107
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=39.29 E-value=43 Score=30.64 Aligned_cols=39 Identities=15% Similarity=0.168 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHH
Q 035542 90 RVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDN 129 (300)
Q Consensus 90 ~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~ 129 (300)
.-+.+++++|.+ ..-.++++|.++|.|.||.=|++.+..
T Consensus 94 ~d~~a~~~~L~~-~~~~~~~~ig~~GfC~GG~~a~~~a~~ 132 (236)
T COG0412 94 ADIDAALDYLAR-QPQVDPKRIGVVGFCMGGGLALLAATR 132 (236)
T ss_pred HHHHHHHHHHHh-CCCCCCceEEEEEEcccHHHHHHhhcc
Confidence 346678888887 344678999999999999777665544
No 108
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=39.11 E-value=47 Score=33.64 Aligned_cols=34 Identities=9% Similarity=0.135 Sum_probs=22.8
Q ss_pred HHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 91 VFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 91 i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
.+++.++.+.+ -.+.++|+|.|+|.||+=+....
T Consensus 147 ~Lk~lIe~~~~---~~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 147 GLKKKLETVYK---ASGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred HHHHHHHHHHH---HcCCCCEEEEEECHhHHHHHHHH
Confidence 45555555544 23357899999999997766433
No 109
>PLN02571 triacylglycerol lipase
Probab=38.86 E-value=57 Score=32.94 Aligned_cols=23 Identities=22% Similarity=0.242 Sum_probs=17.7
Q ss_pred eEEEeecChhHHHHHHhHHHHHh
Q 035542 110 NAILSGCSAGGFASILYCDNFRA 132 (300)
Q Consensus 110 ~vilsG~SAGG~g~~~~~d~v~~ 132 (300)
.|+++|+|-||.=|.+.+-.++.
T Consensus 227 sI~VTGHSLGGALAtLaA~dl~~ 249 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDIVA 249 (413)
T ss_pred cEEEeccchHHHHHHHHHHHHHH
Confidence 69999999999666666666654
No 110
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=37.27 E-value=24 Score=28.95 Aligned_cols=16 Identities=38% Similarity=0.659 Sum_probs=12.6
Q ss_pred EEEeecChhHHHHHHh
Q 035542 111 AILSGCSAGGFASILY 126 (300)
Q Consensus 111 vilsG~SAGG~g~~~~ 126 (300)
-+++|.|+||+-+.+.
T Consensus 29 d~i~GtS~Gal~a~~~ 44 (204)
T PF01734_consen 29 DVISGTSAGALNAALL 44 (204)
T ss_dssp SEEEEECCHHHHHHHH
T ss_pred cEEEEcChhhhhHHHH
Confidence 4699999999877443
No 111
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=36.71 E-value=37 Score=34.26 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHH
Q 035542 89 ARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFAS 123 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~ 123 (300)
.+-+++|||+|.+ ...-+.++|.+.|-|.||.-+
T Consensus 242 ~~l~~aVLd~L~~-~p~VD~~RV~~~G~SfGGy~A 275 (411)
T PF06500_consen 242 SRLHQAVLDYLAS-RPWVDHTRVGAWGFSFGGYYA 275 (411)
T ss_dssp CHHHHHHHHHHHH-STTEEEEEEEEEEETHHHHHH
T ss_pred HHHHHHHHHHHhc-CCccChhheEEEEeccchHHH
Confidence 5789999999988 333467799999999999665
No 112
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=36.62 E-value=91 Score=30.64 Aligned_cols=40 Identities=30% Similarity=0.427 Sum_probs=23.8
Q ss_pred CCeEEEeecChhHHHHHHhHHHHHhhCCCccE-EEEeeccccccc
Q 035542 108 AQNAILSGCSAGGFASILYCDNFRALFPVGTR-VKCLADAGFFIN 151 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~-v~~l~DSG~Fld 151 (300)
.++++|.|+|.||.-++..+-. .|..++ +.++.-+|+...
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~----~p~~v~~lvl~~p~~~~~~ 215 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALK----HPEHVQHLILVGPAGFSSE 215 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHh----CchhhcEEEEECCccccCC
Confidence 4579999999999877654433 343333 334433555443
No 113
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=36.42 E-value=1.1e+02 Score=26.59 Aligned_cols=36 Identities=11% Similarity=0.281 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHH
Q 035542 89 ARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCD 128 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d 128 (300)
...|.+.|+.-.. .+ .+.++|.|+|.|.+.++.+..
T Consensus 39 ~~~W~~~l~~~i~--~~--~~~~ilVaHSLGc~~~l~~l~ 74 (171)
T PF06821_consen 39 LDEWVQALDQAID--AI--DEPTILVAHSLGCLTALRWLA 74 (171)
T ss_dssp HHHHHHHHHHCCH--C---TTTEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh--hc--CCCeEEEEeCHHHHHHHHHHh
Confidence 3456666665444 23 335999999999999988876
No 114
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=35.88 E-value=31 Score=30.92 Aligned_cols=41 Identities=12% Similarity=0.203 Sum_probs=29.2
Q ss_pred ccccchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHH
Q 035542 83 NLHFREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASIL 125 (300)
Q Consensus 83 ~l~frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~ 125 (300)
.+.-.|.+..+.+.+.+... -.+..++.+.|+|.||+=+-.
T Consensus 54 gI~~~g~rL~~eI~~~~~~~--~~~~~~IsfIgHSLGGli~r~ 94 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDY--ESKIRKISFIGHSLGGLIARY 94 (217)
T ss_pred hhHHHHHHHHHHHHHhcccc--ccccccceEEEecccHHHHHH
Confidence 45567788888888877651 112468999999999975533
No 115
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=35.82 E-value=88 Score=30.66 Aligned_cols=60 Identities=18% Similarity=0.318 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHhhccCCC-CCCeEEEeecChh-HHHHHHhHHHHHhhCCCccEEEEeeccccccccCCCCch
Q 035542 89 ARVFLAVMKDLLTVKGMI-NAQNAILSGCSAG-GFASILYCDNFRALFPVGTRVKCLADAGFFINVKDISDA 158 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~-~a~~vilsG~SAG-G~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~ 158 (300)
..|+...|++....-.+. .+++|++.|.|.| |+++ ++...+..++.- -|.|+..+.....
T Consensus 21 e~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~-----RIsaaFG~gAdT-----iGVffE~pgte~~ 82 (398)
T COG3007 21 EANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAA-----RISAAFGPGADT-----IGVFFERPGTERK 82 (398)
T ss_pred HHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHH-----HHHHHhCCCCce-----eeEEeecCCccCC
Confidence 678889999998843355 5899999999998 5665 677777644321 3778877665543
No 116
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=35.62 E-value=74 Score=31.37 Aligned_cols=42 Identities=26% Similarity=0.196 Sum_probs=23.8
Q ss_pred CCCeEEEeecChhH-HHHHHhHHHHHhhCCCccEEEEeeccccccccCC
Q 035542 107 NAQNAILSGCSAGG-FASILYCDNFRALFPVGTRVKCLADAGFFINVKD 154 (300)
Q Consensus 107 ~a~~vilsG~SAGG-~g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~ 154 (300)
...++|+.|+|-|| ++| ++|..+|.- -.-.++-|+...-..+
T Consensus 111 ~~~pwI~~GgSY~G~Laa-----w~r~kyP~~-~~ga~ASSapv~a~~d 153 (434)
T PF05577_consen 111 PNSPWIVFGGSYGGALAA-----WFRLKYPHL-FDGAWASSAPVQAKVD 153 (434)
T ss_dssp CC--EEEEEETHHHHHHH-----HHHHH-TTT--SEEEEET--CCHCCT
T ss_pred CCCCEEEECCcchhHHHH-----HHHhhCCCe-eEEEEeccceeeeecc
Confidence 44478888888887 555 888999964 3445556665544333
No 117
>PLN00413 triacylglycerol lipase
Probab=34.76 E-value=63 Score=33.24 Aligned_cols=25 Identities=36% Similarity=0.476 Sum_probs=18.0
Q ss_pred CCeEEEeecChhHHHHHHhHHHHHh
Q 035542 108 AQNAILSGCSAGGFASILYCDNFRA 132 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d~v~~ 132 (300)
..+|+++|+|.||-=|.+.+..++.
T Consensus 283 ~~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 283 TSKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred CCeEEEEecCHHHHHHHHHHHHHHh
Confidence 3469999999999666666555543
No 118
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=34.14 E-value=12 Score=34.90 Aligned_cols=20 Identities=30% Similarity=0.404 Sum_probs=17.6
Q ss_pred hhhhhcCCCceEEeechhhH
Q 035542 196 QYVAGQVITPLFIINSAYDR 215 (300)
Q Consensus 196 ~~~~~~i~tP~Fi~~s~YD~ 215 (300)
-.++|.|+-|+||++-.-|.
T Consensus 209 r~~lp~vkcPtli~hG~kDp 228 (277)
T KOG2984|consen 209 RLVLPQVKCPTLIMHGGKDP 228 (277)
T ss_pred hhhcccccCCeeEeeCCcCC
Confidence 45899999999999998876
No 119
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=34.04 E-value=1.3e+02 Score=26.22 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=27.9
Q ss_pred cchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHh
Q 035542 86 FREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILY 126 (300)
Q Consensus 86 frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~ 126 (300)
..|...+...|++.... -++ .+++|+|.|-|+.-+-..
T Consensus 61 ~~G~~~~~~~i~~~~~~--CP~-~kivl~GYSQGA~V~~~~ 98 (179)
T PF01083_consen 61 AAGVANLVRLIEEYAAR--CPN-TKIVLAGYSQGAMVVGDA 98 (179)
T ss_dssp HHHHHHHHHHHHHHHHH--STT-SEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh--CCC-CCEEEEecccccHHHHHH
Confidence 35778888888877762 443 489999999999665443
No 120
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=33.81 E-value=45 Score=28.07 Aligned_cols=19 Identities=21% Similarity=0.268 Sum_probs=15.3
Q ss_pred hhhcCCCceEEeechhhHH
Q 035542 198 VAGQVITPLFIINSAYDRW 216 (300)
Q Consensus 198 ~~~~i~tP~Fi~~s~YD~w 216 (300)
.++.++.|+++++...|..
T Consensus 188 ~~~~~~~Pvlii~g~~D~~ 206 (251)
T TIGR02427 188 RLGAIAVPTLCIAGDQDGS 206 (251)
T ss_pred HhhhcCCCeEEEEeccCCc
Confidence 4567889999999988863
No 121
>PRK15231 fimbrial adhesin protein SefD; Provisional
Probab=33.66 E-value=47 Score=28.88 Aligned_cols=41 Identities=15% Similarity=0.242 Sum_probs=28.3
Q ss_pred CCCCceeeecCCCCCCccEEEEecccceeCCcccccccccccch
Q 035542 45 CSPPTYHFDKGFGAGINNWLVFVEGGGWCNDVTTCHGTNLHFRE 88 (300)
Q Consensus 45 GSp~~yy~~~g~g~gs~~wli~leGGG~C~~~~~C~~~~l~frG 88 (300)
|-.|+.|+-.|.....+++-|=++|.||--|. .+..+.-+|
T Consensus 78 gg~P~~YIvqGk~dsqh~LrVRlgGeGWqPd~---~g~Giv~~~ 118 (150)
T PRK15231 78 KNTPGAYIIRGQNNSAHKLRIRIGGEDWQPDN---SGIGMVSHS 118 (150)
T ss_pred CCCccEEEEECCCCCcceEEEEecCCCccCCC---CCCceEeec
Confidence 44556666666555678999999999998776 334444444
No 122
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=33.35 E-value=93 Score=29.51 Aligned_cols=50 Identities=22% Similarity=0.339 Sum_probs=28.7
Q ss_pred HHHHHHHhhccCCCCCCe-EEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccc
Q 035542 93 LAVMKDLLTVKGMINAQN-AILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFF 149 (300)
Q Consensus 93 ~avl~~l~~~~gl~~a~~-vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~F 149 (300)
-+.+..+++..|+ ++ ++|.|.|.||.=++..+-. .|..++-.++.|++..
T Consensus 113 ~~~~~~~~~~l~~---~~~~~l~G~S~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 113 VKAQKLLLDHLGI---EQIAAVVGGSMGGMQALEWAID----YPERVRAIVVLATSAR 163 (351)
T ss_pred HHHHHHHHHHcCC---CCceEEEEECHHHHHHHHHHHH----ChHhhheEEEEccCCc
Confidence 3333444443344 45 9999999999766554433 3444444455566543
No 123
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=33.17 E-value=71 Score=30.59 Aligned_cols=13 Identities=31% Similarity=0.718 Sum_probs=10.4
Q ss_pred EEeecChhHHHHH
Q 035542 112 ILSGCSAGGFASI 124 (300)
Q Consensus 112 ilsG~SAGG~g~~ 124 (300)
+++|.|+||+=|.
T Consensus 43 li~GTStGgiia~ 55 (329)
T cd07215 43 LVAGTSTGGILTC 55 (329)
T ss_pred eeeccCHHHHHHH
Confidence 7999999996433
No 124
>PLN02719 triacylglycerol lipase
Probab=32.94 E-value=81 Score=32.78 Aligned_cols=26 Identities=19% Similarity=0.331 Sum_probs=20.4
Q ss_pred CCeEEEeecChhHHHHHHhHHHHHhh
Q 035542 108 AQNAILSGCSAGGFASILYCDNFRAL 133 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d~v~~~ 133 (300)
..+|+++|+|-||-=|.+.+.++++.
T Consensus 297 ~~sItVTGHSLGGALAtLaA~Dl~~~ 322 (518)
T PLN02719 297 ELSITVTGHSLGGALAVLSAYDVAEM 322 (518)
T ss_pred cceEEEecCcHHHHHHHHHHHHHHHh
Confidence 45899999999996666777777654
No 125
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=32.76 E-value=49 Score=33.25 Aligned_cols=47 Identities=28% Similarity=0.564 Sum_probs=30.5
Q ss_pred cEEEEecccceeCCcccccccccccchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 62 NWLVFVEGGGWCNDVTTCHGTNLHFREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 62 ~wli~leGGG~C~~~~~C~~~~l~frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
+.-+-|+|||. ..++|-| |++.|.+ .|+.- + +++|+|||++-+.+.+
T Consensus 73 rtALvLsGGG~---------rG~~hiG------VLkaL~E-~gl~p-~--vIsGTSaGAivAal~a 119 (421)
T cd07230 73 RTALLLSGGGT---------FGMFHIG------VLKALFE-ANLLP-R--IISGSSAGSIVAAILC 119 (421)
T ss_pred CEEEEEcCcHH---------HHHHHHH------HHHHHHH-cCCCC-C--EEEEECHHHHHHHHHH
Confidence 56788999972 2334333 5666666 46542 2 7999999996654444
No 126
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=32.57 E-value=59 Score=27.90 Aligned_cols=25 Identities=28% Similarity=0.531 Sum_probs=17.4
Q ss_pred HHHHHhhccCCCCCCeEEEeecChhHHHH
Q 035542 95 VMKDLLTVKGMINAQNAILSGCSAGGFAS 123 (300)
Q Consensus 95 vl~~l~~~~gl~~a~~vilsG~SAGG~g~ 123 (300)
+++.|.+ .+++ -=+++|.|||++-+
T Consensus 18 vl~~L~e-~g~~---~d~i~GtSaGAi~a 42 (175)
T cd07228 18 VLRALEE-EGIE---IDIIAGSSIGALVG 42 (175)
T ss_pred HHHHHHH-CCCC---eeEEEEeCHHHHHH
Confidence 5566666 4652 45899999999744
No 127
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=32.39 E-value=1.2e+02 Score=27.52 Aligned_cols=21 Identities=24% Similarity=0.412 Sum_probs=17.1
Q ss_pred hhhhhcCCCceEEeechhhHH
Q 035542 196 QYVAGQVITPLFIINSAYDRW 216 (300)
Q Consensus 196 ~~~~~~i~tP~Fi~~s~YD~w 216 (300)
+..++.|+.|+.|++..-|.+
T Consensus 227 ~~~l~~i~~P~lvi~G~~D~~ 247 (294)
T PLN02824 227 EELLPAVKCPVLIAWGEKDPW 247 (294)
T ss_pred HHHHhhcCCCeEEEEecCCCC
Confidence 456788999999999988863
No 128
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=32.34 E-value=1.9e+02 Score=26.69 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=20.6
Q ss_pred HHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHH
Q 035542 93 LAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCD 128 (300)
Q Consensus 93 ~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d 128 (300)
.+.++.+++. + +.+++++.|.|.||.=++..+.
T Consensus 82 ~~dl~~l~~~--l-~~~~~~lvG~S~GG~ia~~~a~ 114 (306)
T TIGR01249 82 VADIEKLREK--L-GIKNWLVFGGSWGSTLALAYAQ 114 (306)
T ss_pred HHHHHHHHHH--c-CCCCEEEEEECHHHHHHHHHHH
Confidence 3344445552 2 2357899999999976554443
No 129
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=32.33 E-value=85 Score=29.83 Aligned_cols=34 Identities=26% Similarity=0.460 Sum_probs=24.1
Q ss_pred CCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeec
Q 035542 106 INAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLAD 145 (300)
Q Consensus 106 ~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~D 145 (300)
.+.++|+|+|. |+.+..+++++.+|. +++..+.|
T Consensus 272 ~~~~~Iil~GG-----Ga~ll~~~l~~~f~~-~~i~~~~d 305 (320)
T TIGR03739 272 ESIQNIVLVGG-----GAFLFKKAVKAAFPK-HRIVEVDE 305 (320)
T ss_pred CcccEEEEeCC-----cHHHHHHHHHHHCCC-CeeEecCC
Confidence 35788999875 344667999999995 45555555
No 130
>PRK10749 lysophospholipase L2; Provisional
Probab=32.30 E-value=1.4e+02 Score=28.10 Aligned_cols=21 Identities=19% Similarity=0.194 Sum_probs=16.3
Q ss_pred CCeEEEeecChhHHHHHHhHH
Q 035542 108 AQNAILSGCSAGGFASILYCD 128 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d 128 (300)
..+++|.|+|.||.-+...+.
T Consensus 130 ~~~~~l~GhSmGG~ia~~~a~ 150 (330)
T PRK10749 130 YRKRYALAHSMGGAILTLFLQ 150 (330)
T ss_pred CCCeEEEEEcHHHHHHHHHHH
Confidence 468999999999977654443
No 131
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=32.18 E-value=42 Score=30.10 Aligned_cols=39 Identities=13% Similarity=0.135 Sum_probs=22.4
Q ss_pred ccccchHHHHHHHHHHHhhccCCCC------CCeEEEeecChhHHHH
Q 035542 83 NLHFREARVFLAVMKDLLTVKGMIN------AQNAILSGCSAGGFAS 123 (300)
Q Consensus 83 ~l~frG~~i~~avl~~l~~~~gl~~------a~~vilsG~SAGG~g~ 123 (300)
.+++-| -+....++.|.+ .++.+ .+.+++.|.|||..-.
T Consensus 83 ~I~l~G-G~~~~~~~~l~~-~~l~~~l~~~~~~g~~i~G~SAGa~i~ 127 (212)
T cd03146 83 VIYVGG-GNTFNLLAQWRE-HGLDAILKAALERGVVYIGWSAGSNCW 127 (212)
T ss_pred EEEECC-chHHHHHHHHHH-cCHHHHHHHHHHCCCEEEEECHhHHhh
Confidence 344444 355555555555 34332 2357899999998443
No 132
>PLN02753 triacylglycerol lipase
Probab=31.22 E-value=89 Score=32.59 Aligned_cols=53 Identities=17% Similarity=0.206 Sum_probs=32.0
Q ss_pred CCeEEEeecChhHHHHHHhHHHHHhh-CCC-----ccEEEEeeccccccccCCCCchhHHHHHHH
Q 035542 108 AQNAILSGCSAGGFASILYCDNFRAL-FPV-----GTRVKCLADAGFFINVKDISDASHIEEFFA 166 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d~v~~~-lp~-----~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~ 166 (300)
..+|+++|+|-||-=|.+.+.+++.. ++. ...|.++.=++ +--|+..+.++++
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGs------PRVGN~aFA~~~~ 369 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGG------PRVGNVRFKDRME 369 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCC------CCccCHHHHHHHH
Confidence 45999999999996666777666653 321 23345544333 2335555555554
No 133
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=30.76 E-value=43 Score=29.75 Aligned_cols=17 Identities=24% Similarity=0.300 Sum_probs=13.1
Q ss_pred CeEEEeecChhHHHHHH
Q 035542 109 QNAILSGCSAGGFASIL 125 (300)
Q Consensus 109 ~~vilsG~SAGG~g~~~ 125 (300)
+-+++.|.|||+.-..-
T Consensus 113 ~G~v~~G~SAGA~~~~~ 129 (210)
T cd03129 113 RGVVIGGTSAGAAVMGE 129 (210)
T ss_pred cCCeEEEcCHHHHHhhh
Confidence 46799999999965443
No 134
>PLN02162 triacylglycerol lipase
Probab=30.72 E-value=95 Score=31.95 Aligned_cols=25 Identities=28% Similarity=0.348 Sum_probs=18.6
Q ss_pred CCeEEEeecChhHHHHHHhHHHHHh
Q 035542 108 AQNAILSGCSAGGFASILYCDNFRA 132 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d~v~~ 132 (300)
..+++++|+|-||-=|.+.+..++.
T Consensus 277 ~~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred CceEEEEecChHHHHHHHHHHHHHH
Confidence 3579999999999666666665553
No 135
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=30.34 E-value=54 Score=31.15 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=24.8
Q ss_pred HHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHh
Q 035542 91 VFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILY 126 (300)
Q Consensus 91 i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~ 126 (300)
.+.++++++.+. ...+++.+.|+|.||.-++..
T Consensus 121 ~~~~~v~~l~~~---~~~~~i~lvGhS~GG~i~~~~ 153 (350)
T TIGR01836 121 YIDKCVDYICRT---SKLDQISLLGICQGGTFSLCY 153 (350)
T ss_pred HHHHHHHHHHHH---hCCCcccEEEECHHHHHHHHH
Confidence 366778888773 245789999999999766544
No 136
>PLN02934 triacylglycerol lipase
Probab=30.27 E-value=89 Score=32.46 Aligned_cols=37 Identities=27% Similarity=0.362 Sum_probs=24.0
Q ss_pred HHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHH
Q 035542 92 FLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFR 131 (300)
Q Consensus 92 ~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~ 131 (300)
+...++++++. .++ .+++++|+|-||-=|.+.+..++
T Consensus 307 v~~~lk~ll~~--~p~-~kIvVTGHSLGGALAtLaA~~L~ 343 (515)
T PLN02934 307 VRSKLKSLLKE--HKN-AKFVVTGHSLGGALAILFPTVLV 343 (515)
T ss_pred HHHHHHHHHHH--CCC-CeEEEeccccHHHHHHHHHHHHH
Confidence 45555666651 333 47999999999955555555554
No 137
>PRK04940 hypothetical protein; Provisional
Probab=30.15 E-value=92 Score=27.84 Aligned_cols=23 Identities=17% Similarity=0.492 Sum_probs=18.3
Q ss_pred CeEEEeecChhHHHHHHhHHHHHhhCC
Q 035542 109 QNAILSGCSAGGFASILYCDNFRALFP 135 (300)
Q Consensus 109 ~~vilsG~SAGG~g~~~~~d~v~~~lp 135 (300)
+.++|.|+|-|| +++.++.+++.
T Consensus 60 ~~~~liGSSLGG----yyA~~La~~~g 82 (180)
T PRK04940 60 ERPLICGVGLGG----YWAERIGFLCG 82 (180)
T ss_pred CCcEEEEeChHH----HHHHHHHHHHC
Confidence 579999999999 55567777764
No 138
>PLN02872 triacylglycerol lipase
Probab=29.63 E-value=72 Score=31.64 Aligned_cols=34 Identities=12% Similarity=0.210 Sum_probs=25.4
Q ss_pred chHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHH
Q 035542 87 REARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASI 124 (300)
Q Consensus 87 rG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~ 124 (300)
.+..-+.++++++++. . .+++.+.|+|.||.-++
T Consensus 142 ~a~~Dl~a~id~i~~~---~-~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 142 LALYDLAEMIHYVYSI---T-NSKIFIVGHSQGTIMSL 175 (395)
T ss_pred HHHHHHHHHHHHHHhc---c-CCceEEEEECHHHHHHH
Confidence 3446778888888762 2 36899999999997654
No 139
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=29.38 E-value=63 Score=29.24 Aligned_cols=30 Identities=30% Similarity=0.522 Sum_probs=19.6
Q ss_pred HHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 94 AVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 94 avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
-+++.|.+ .|++ . -.++|.|||++-+.+.+
T Consensus 17 GvL~aL~e-~gi~-~--~~i~GtSaGAi~aa~~a 46 (221)
T cd07210 17 GFLAALLE-MGLE-P--SAISGTSAGALVGGLFA 46 (221)
T ss_pred HHHHHHHH-cCCC-c--eEEEEeCHHHHHHHHHH
Confidence 35666666 4653 2 36999999996554443
No 140
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=29.16 E-value=70 Score=30.92 Aligned_cols=37 Identities=27% Similarity=0.389 Sum_probs=27.4
Q ss_pred eEEEeecChhHHHHHHhHHHHHhhCCC-ccEEEEeecccc
Q 035542 110 NAILSGCSAGGFASILYCDNFRALFPV-GTRVKCLADAGF 148 (300)
Q Consensus 110 ~vilsG~SAGG~g~~~~~d~v~~~lp~-~~~v~~l~DSG~ 148 (300)
.=++.|.|.|+ ++.-+-.+++.+++ .+-|.+++|+|.
T Consensus 258 eGilvG~SsGA--~~~aa~~~a~~~~~g~~IVti~pD~G~ 295 (300)
T COG0031 258 EGLLVGISSGA--ALAAALKLAKELPAGKTIVTILPDSGE 295 (300)
T ss_pred hCeeecccHHH--HHHHHHHHHHhcCCCCeEEEEECCCcc
Confidence 45689999997 44556678888874 456888999984
No 141
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=28.70 E-value=66 Score=29.16 Aligned_cols=26 Identities=15% Similarity=0.308 Sum_probs=18.6
Q ss_pred HHHHHHHHhhccCCCCCCeEEEeecChhH
Q 035542 92 FLAVMKDLLTVKGMINAQNAILSGCSAGG 120 (300)
Q Consensus 92 ~~avl~~l~~~~gl~~a~~vilsG~SAGG 120 (300)
+..+|++..+ -.+.++|+|.|.|-|+
T Consensus 54 l~~~i~~y~~---~w~~~~vvLiGYSFGA 79 (192)
T PF06057_consen 54 LARIIRHYRA---RWGRKRVVLIGYSFGA 79 (192)
T ss_pred HHHHHHHHHH---HhCCceEEEEeecCCc
Confidence 3444444443 4578999999999999
No 142
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=28.22 E-value=63 Score=30.52 Aligned_cols=49 Identities=27% Similarity=0.367 Sum_probs=31.7
Q ss_pred CccEEEEecccceeCCcccccccccccchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 60 INNWLVFVEGGGWCNDVTTCHGTNLHFREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 60 s~~wli~leGGG~C~~~~~C~~~~l~frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
..+.-+-|.|||+ ..++|=| |++.|.+ .| -+--+++|+|||++-+.+.+
T Consensus 9 ~~~i~LvL~GGgA---------rG~~hiG------Vl~aL~e-~g---i~~~~iaGtS~GAiva~l~A 57 (306)
T COG1752 9 KLRIGLVLGGGGA---------RGAAHIG------VLKALEE-AG---IPIDVIAGTSAGAIVAALYA 57 (306)
T ss_pred CceEEEEecCcHH---------HHHHHHH------HHHHHHH-cC---CCccEEEecCHHHHHHHHHH
Confidence 3457888999973 2333333 5666666 35 45678999999996544433
No 143
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=28.10 E-value=1.5e+02 Score=26.50 Aligned_cols=49 Identities=10% Similarity=0.171 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhhcc-CCCCCCeEEEeecChhHHHH---HHhHHHHHhhCCCc
Q 035542 89 ARVFLAVMKDLLTVK-GMINAQNAILSGCSAGGFAS---ILYCDNFRALFPVG 137 (300)
Q Consensus 89 ~~i~~avl~~l~~~~-gl~~a~~vilsG~SAGG~g~---~~~~d~v~~~lp~~ 137 (300)
...++.+++.+.+.. ..+..+-++|.-+-+||.|+ .+-++.+|+.+|..
T Consensus 104 ~~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~ 156 (216)
T PF00091_consen 104 EEALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKK 156 (216)
T ss_dssp HHHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTS
T ss_pred cccccccccccchhhccccccccceecccccceeccccccccchhhhcccccc
Confidence 447788887777631 23788889988888888764 66788999999854
No 144
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=26.99 E-value=1.2e+02 Score=29.33 Aligned_cols=27 Identities=15% Similarity=0.375 Sum_probs=21.1
Q ss_pred CCCCCeEEEeecChhHHHHHHhHHHHHhhCCC
Q 035542 105 MINAQNAILSGCSAGGFASILYCDNFRALFPV 136 (300)
Q Consensus 105 l~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~ 136 (300)
..+.++|+|+|.+|- +..+++++.+|.
T Consensus 289 ~~~~d~IiL~GGGA~-----ll~~~lk~~f~~ 315 (344)
T PRK13917 289 INSFDRVIVTGGGAN-----IFFDSLSHWYSD 315 (344)
T ss_pred cCCCCEEEEECCcHH-----HHHHHHHHHcCC
Confidence 456788999998774 346999999984
No 145
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=26.86 E-value=87 Score=30.11 Aligned_cols=68 Identities=19% Similarity=0.296 Sum_probs=39.6
Q ss_pred ccEEEEecccceeCCcccccccccccchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCC--Ccc
Q 035542 61 NNWLVFVEGGGWCNDVTTCHGTNLHFREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFP--VGT 138 (300)
Q Consensus 61 ~~wli~leGGG~C~~~~~C~~~~l~frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp--~~~ 138 (300)
.|.-+-+||||- +.++ .-.|||.++.. ++.. -=.+.|-|||++=+ +.++...-. ..+
T Consensus 10 ~kvaLV~EGGG~---------Rgif------TAGVLD~fl~a-~~~~--f~~~~GvSAGA~n~---~aYls~Q~gra~~~ 68 (292)
T COG4667 10 GKVALVLEGGGQ---------RGIF------TAGVLDEFLRA-NFNP--FDLVVGVSAGALNL---VAYLSKQRGRARRV 68 (292)
T ss_pred CcEEEEEecCCc---------ccee------hHHHHHHHHHh-ccCC--cCeeeeecHhHHhH---HHHhhcCCchHHHH
Confidence 578888999982 2333 45689999841 2222 23578999998432 233333222 134
Q ss_pred EEEEeeccccc
Q 035542 139 RVKCLADAGFF 149 (300)
Q Consensus 139 ~v~~l~DSG~F 149 (300)
.++...|+=||
T Consensus 69 ~~~yt~d~ry~ 79 (292)
T COG4667 69 IVEYTTDRRYF 79 (292)
T ss_pred HHHhhcchhhc
Confidence 45566666544
No 146
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=26.82 E-value=2.8e+02 Score=28.85 Aligned_cols=57 Identities=11% Similarity=0.063 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhh---CCCccEEEEeec-cc
Q 035542 89 ARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRAL---FPVGTRVKCLAD-AG 147 (300)
Q Consensus 89 ~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~---lp~~~~v~~l~D-SG 147 (300)
+...+-+++++-. -.....+.+|+|.|-||.=...-+..+.+. +...+.+..+.+ +|
T Consensus 180 ~~~~~~f~~~fp~--~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 180 YSFLRLFFDKFPH--YARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred HHHHHHHHHHHHH--HhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 3445556666665 355667899999999997776667777764 334566666666 35
No 147
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.23 E-value=1.5e+02 Score=28.86 Aligned_cols=118 Identities=17% Similarity=0.198 Sum_probs=56.2
Q ss_pred ccccccch--HHHHHHHHHHHhhccCCCCCCeEEEeecChhHH---HHHHhHHHHHhhCCCccEEEEeeccccccccCCC
Q 035542 81 GTNLHFRE--ARVFLAVMKDLLTVKGMINAQNAILSGCSAGGF---ASILYCDNFRALFPVGTRVKCLADAGFFINVKDI 155 (300)
Q Consensus 81 ~~~l~frG--~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~---g~~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~ 155 (300)
..++|||| .+.++|| +-+++ .---..++|-++|.|-||- ++..--+.+++..+ .|=-|+|==.-++....
T Consensus 148 kd~yyyr~v~~D~~~av-e~~~s-l~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~---~~Pfl~df~r~i~~~~~ 222 (321)
T COG3458 148 KDTYYYRGVFLDAVRAV-EILAS-LDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVA---DYPFLSDFPRAIELATE 222 (321)
T ss_pred CCceEEeeehHHHHHHH-HHHhc-cCccchhheEEeccccCchhhhhhhhcChhhhcccc---cccccccchhheeeccc
Confidence 35677887 3444443 44544 2223467999999999982 23333334443332 11122222222222211
Q ss_pred CchhHHHHHHHHHHHhhccCccCCcccccc-cCCCCcCcchhhhhhcCCCceEEeechhhH
Q 035542 156 SDASHIEEFFAQVVATHGSIKHLPASCTKR-LNPAGLCFFPQYVAGQVITPLFIINSAYDR 215 (300)
Q Consensus 156 ~g~~~~~~~~~~~~~l~~~~~~lp~~C~~~-~~~~w~C~f~~~~~~~i~tP~Fi~~s~YD~ 215 (300)
.....++.+++.. . |+ .+. +. +-.=|=..++.+-|+.|+.+.-.+.|.
T Consensus 223 ~~ydei~~y~k~h----~-----~~--e~~v~~-TL~yfD~~n~A~RiK~pvL~svgL~D~ 271 (321)
T COG3458 223 GPYDEIQTYFKRH----D-----PK--EAEVFE-TLSYFDIVNLAARIKVPVLMSVGLMDP 271 (321)
T ss_pred CcHHHHHHHHHhc----C-----ch--HHHHHH-HHhhhhhhhHHHhhccceEEeecccCC
Confidence 1222333443322 1 11 000 00 001123455778899999988888875
No 148
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=26.19 E-value=94 Score=27.99 Aligned_cols=20 Identities=10% Similarity=0.144 Sum_probs=16.4
Q ss_pred hhhhcCCCceEEeechhhHH
Q 035542 197 YVAGQVITPLFIINSAYDRW 216 (300)
Q Consensus 197 ~~~~~i~tP~Fi~~s~YD~w 216 (300)
..++.|+.|++|+....|.+
T Consensus 201 ~~l~~i~~P~lii~G~~D~~ 220 (276)
T TIGR02240 201 HWLHKIQQPTLVLAGDDDPI 220 (276)
T ss_pred hHhhcCCCCEEEEEeCCCCc
Confidence 34678999999999999963
No 149
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=26.07 E-value=1.1e+02 Score=29.94 Aligned_cols=39 Identities=31% Similarity=0.366 Sum_probs=23.7
Q ss_pred HHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCC
Q 035542 92 FLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPV 136 (300)
Q Consensus 92 ~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~ 136 (300)
+-++++++.. ....+|+|.|+|.||-=+ -.-.....+|+
T Consensus 133 ~~~~i~~~fg----e~~~~iilVGHSmGGaIa--v~~a~~k~lps 171 (343)
T KOG2564|consen 133 FGAVIKELFG----ELPPQIILVGHSMGGAIA--VHTAASKTLPS 171 (343)
T ss_pred HHHHHHHHhc----cCCCceEEEeccccchhh--hhhhhhhhchh
Confidence 3356666543 346679999999999322 22334455664
No 150
>KOG3101 consensus Esterase D [General function prediction only]
Probab=25.93 E-value=28 Score=32.58 Aligned_cols=37 Identities=22% Similarity=0.317 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhhcc---CCC-CCCeEEEeecChhHHHHHH
Q 035542 89 ARVFLAVMKDLLTVK---GMI-NAQNAILSGCSAGGFASIL 125 (300)
Q Consensus 89 ~~i~~avl~~l~~~~---gl~-~a~~vilsG~SAGG~g~~~ 125 (300)
+|...-|.++|.+.. .++ .+.++-++|+|+||.||+.
T Consensus 117 yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~ 157 (283)
T KOG3101|consen 117 YRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALT 157 (283)
T ss_pred hhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEE
Confidence 344455555555421 111 3456889999999999853
No 151
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=25.92 E-value=73 Score=28.50 Aligned_cols=27 Identities=37% Similarity=0.604 Sum_probs=18.6
Q ss_pred HHHHHhhccCCCCCCeEEEeecChhHHHHHH
Q 035542 95 VMKDLLTVKGMINAQNAILSGCSAGGFASIL 125 (300)
Q Consensus 95 vl~~l~~~~gl~~a~~vilsG~SAGG~g~~~ 125 (300)
+++.|.+ .|+ .--+++|.|+|++-+.+
T Consensus 16 vl~aL~e-~g~---~~d~i~GtS~GAl~aa~ 42 (215)
T cd07209 16 VLKALAE-AGI---EPDIISGTSIGAINGAL 42 (215)
T ss_pred HHHHHHH-cCC---CCCEEEEECHHHHHHHH
Confidence 5666766 466 34489999999964433
No 152
>PRK11071 esterase YqiA; Provisional
Probab=25.82 E-value=1.1e+02 Score=26.71 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=23.0
Q ss_pred HHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHh
Q 035542 91 VFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILY 126 (300)
Q Consensus 91 i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~ 126 (300)
.+.+.++++.+..+ .+++++.|.|.||.=++.-
T Consensus 46 ~~~~~l~~l~~~~~---~~~~~lvG~S~Gg~~a~~~ 78 (190)
T PRK11071 46 DAAELLESLVLEHG---GDPLGLVGSSLGGYYATWL 78 (190)
T ss_pred HHHHHHHHHHHHcC---CCCeEEEEECHHHHHHHHH
Confidence 45666677776322 3579999999999766543
No 153
>PF00086 Thyroglobulin_1: Thyroglobulin type-1 repeat; InterPro: IPR000716 Thyroglobulin (Tg) is a large glycoprotein specific to the thyroid gland and is the precursor of the iodinated thyroid hormones thyroxine (T4) and triiodothyronine (T3). The N-terminal section of Tg contains 10 repeats of a domain of about 65 amino acids which is known as the Tg type-1 repeat [, ]. Such a domain has also been found as a single or repeated sequence in the HLA class II associated invariant chain []; human pancreatic carcinoma marker proteins GA733-1 and GA733-2 []; nidogen (entactin), a sulphated glycoprotein which is widely distributed in basement membranes and that is tightly associated with laminin; insulin-like growth factor binding proteins (IGFBP) []; saxiphilin, a transferrin-like protein from Rana catesbeiana (Bull frog) that binds specifically to the neurotoxin saxitoxin []; chum salmon egg cysteine proteinase inhibitor, and equistatin, a thiol-protease inhibitor from Actinia equina (sea anemone) []. The existence of Thyr-1 domains in such a wide variety of proteins raises questions about their activity and function, and their interactions with neighbouring domains. The Thyr-1 and related domains belong to MEROPS proteinase inhibitor family I31, clan IX. Equistatin from A. equina is composed of three Thyr-1 domains; as with other proteins that contains Thyr-1 domains, the thyropins, they bind reversibly and tightly to cysteine proteases (inhibitor family C1). In equistatin inhibition of papain is a function of domain-1. Unusually domain-2 inhibits cathepsin D, an aspartic protease (inhibitor family A1) and has no activity against papain. Domain-3, does not inhibit either papain or cathepsin D, and its function or its target peptidase has yet to be determined [, ].; PDB: 2H7T_A 2DSR_G 1RMJ_A 1ICF_I 1L3H_A 1ZT3_A 2DSQ_H 1ZT5_A.
Probab=25.72 E-value=87 Score=23.00 Aligned_cols=29 Identities=31% Similarity=0.421 Sum_probs=20.2
Q ss_pred HHHHHHHHhhccCCCCceeeeccchhccc
Q 035542 249 RVQFLNALAGLGNSSSRGMFIDSCYIHCQ 277 (300)
Q Consensus 249 r~~~l~~l~~~~~~~~~G~Fi~SC~~Hc~ 277 (300)
|.++++.++........+.|+|.|-.+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~P~C~~~G~ 33 (68)
T PF00086_consen 5 RERALERLESERSSSSDGVFVPQCDEDGS 33 (68)
T ss_dssp HHHHHHHHHHHSTSCCSECEEE-B-TTSS
T ss_pred HHHHHHHHHHhcccCCCCCcCceeCCCCC
Confidence 55666666665677889999999997754
No 154
>PRK10985 putative hydrolase; Provisional
Probab=25.66 E-value=1e+02 Score=29.04 Aligned_cols=32 Identities=16% Similarity=-0.034 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHH
Q 035542 90 RVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASI 124 (300)
Q Consensus 90 ~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~ 124 (300)
..+.++++++.+. ++ .+++++.|.|.||.=+.
T Consensus 115 ~D~~~~i~~l~~~--~~-~~~~~~vG~S~GG~i~~ 146 (324)
T PRK10985 115 EDARFFLRWLQRE--FG-HVPTAAVGYSLGGNMLA 146 (324)
T ss_pred HHHHHHHHHHHHh--CC-CCCEEEEEecchHHHHH
Confidence 4566677877762 33 45799999999996433
No 155
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=25.45 E-value=45 Score=30.09 Aligned_cols=14 Identities=29% Similarity=0.510 Sum_probs=11.3
Q ss_pred CeEEEeecChhHHH
Q 035542 109 QNAILSGCSAGGFA 122 (300)
Q Consensus 109 ~~vilsG~SAGG~g 122 (300)
+-+++.|.|||+.-
T Consensus 116 ~G~v~~G~SAGA~i 129 (217)
T cd03145 116 GGVVIGGTSAGAAV 129 (217)
T ss_pred cCCEEEEccHHHHh
Confidence 45789999999854
No 156
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=24.72 E-value=87 Score=27.15 Aligned_cols=18 Identities=11% Similarity=0.276 Sum_probs=15.2
Q ss_pred hhhcCCCceEEeechhhH
Q 035542 198 VAGQVITPLFIINSAYDR 215 (300)
Q Consensus 198 ~~~~i~tP~Fi~~s~YD~ 215 (300)
.++.|+.|++++....|.
T Consensus 183 ~l~~i~~P~lii~G~~D~ 200 (242)
T PRK11126 183 ALQALTFPFYYLCGERDS 200 (242)
T ss_pred HhhccCCCeEEEEeCCcc
Confidence 456789999999999996
No 157
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=24.67 E-value=2.9e+02 Score=22.71 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=25.8
Q ss_pred CCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeecc
Q 035542 108 AQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADA 146 (300)
Q Consensus 108 a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DS 146 (300)
...+++.|.|.||.-++..+-.+.+.- ..+.-..+.|+
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~~-~~~~~l~~~~~ 100 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEARG-IPPAAVVLLDT 100 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhCC-CCCcEEEEEcc
Confidence 456899999999999887777766542 22333355555
No 158
>PRK10279 hypothetical protein; Provisional
Probab=24.44 E-value=78 Score=30.31 Aligned_cols=48 Identities=21% Similarity=0.310 Sum_probs=31.7
Q ss_pred ccEEEEecccceeCCcccccccccccchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 61 NNWLVFVEGGGWCNDVTTCHGTNLHFREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 61 ~~wli~leGGG~C~~~~~C~~~~l~frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
.|.=+-|+|||. +.++|-| |++.|.+ .|++ --+++|+|||++-+.+.+
T Consensus 4 ~~igLvL~GGGa---------rG~ahiG------VL~aL~E-~gi~---~d~i~GtS~GAlvga~yA 51 (300)
T PRK10279 4 IKIGLALGSGAA---------RGWSHIG------VINALKK-VGIE---IDIVAGCSIGSLVGAAYA 51 (300)
T ss_pred CcEEEEEcCcHH---------HHHHHHH------HHHHHHH-cCCC---cCEEEEEcHHHHHHHHHH
Confidence 466788899973 2333333 6677777 5774 468999999996544433
No 159
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=23.91 E-value=1.2e+02 Score=32.44 Aligned_cols=68 Identities=22% Similarity=0.395 Sum_probs=37.5
Q ss_pred CccEEEEecccceeCC-ccc-------------ccccccccch------HHHHHHHH---HHHhhccC-C-CCCCeEEEe
Q 035542 60 INNWLVFVEGGGWCND-VTT-------------CHGTNLHFRE------ARVFLAVM---KDLLTVKG-M-INAQNAILS 114 (300)
Q Consensus 60 s~~wli~leGGG~C~~-~~~-------------C~~~~l~frG------~~i~~avl---~~l~~~~g-l-~~a~~vils 114 (300)
|+.+|+|+-|||+--. ..+ |--..+-|.= -|-+++|+ -|+..|-- + ..+++|+++
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~allG~TgEriv~a 474 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCALLGSTGERIVLA 474 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEEEe
Confidence 7889999999998543 111 2100000000 12233333 45554311 1 258899999
Q ss_pred ecChhH---HHHHHhH
Q 035542 115 GCSAGG---FASILYC 127 (300)
Q Consensus 115 G~SAGG---~g~~~~~ 127 (300)
|.|||| +++-+.+
T Consensus 475 GDSAGgNL~~~VaLr~ 490 (880)
T KOG4388|consen 475 GDSAGGNLCFTVALRA 490 (880)
T ss_pred ccCCCcceeehhHHHH
Confidence 999999 4554444
No 160
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.45 E-value=1.5e+02 Score=32.73 Aligned_cols=64 Identities=13% Similarity=0.133 Sum_probs=33.9
Q ss_pred CCCCCeEEEeecChhHHHH---HHhHHHHHhhCCCccEEEEeeccccccccCCCCchhHHHHHHHHHHHhhcc
Q 035542 105 MINAQNAILSGCSAGGFAS---ILYCDNFRALFPVGTRVKCLADAGFFINVKDISDASHIEEFFAQVVATHGS 174 (300)
Q Consensus 105 l~~a~~vilsG~SAGG~g~---~~~~d~v~~~lp~~~~v~~l~DSG~Fld~~~~~g~~~~~~~~~~~~~l~~~ 174 (300)
.+.++.|+|.|+|.||+=| +.+-+++...+. .++.=|.. ...++..-...+-++|..+++.|+.
T Consensus 178 ~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVn-----tIITlssP-H~a~Pl~~D~~l~~fy~~vnn~W~k 244 (973)
T KOG3724|consen 178 SPLPHSVILVGHSMGGIVARATLTLKNEVQGSVN-----TIITLSSP-HAAPPLPLDRFLLRFYLLVNNYWNK 244 (973)
T ss_pred CCCCceEEEEeccchhHHHHHHHhhhhhccchhh-----hhhhhcCc-ccCCCCCCcHHHHHHHHHHHHHHHH
Confidence 5668999999999999644 222222222221 01111111 1223333445566777777776643
No 161
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=23.44 E-value=95 Score=29.95 Aligned_cols=47 Identities=26% Similarity=0.436 Sum_probs=30.1
Q ss_pred cEEEEecccceeCCcccccccccccchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 62 NWLVFVEGGGWCNDVTTCHGTNLHFREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 62 ~wli~leGGG~C~~~~~C~~~~l~frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
+.-+-|+|||. ..++|-| |++.|.+ .|+. ++ +++|.|||++-+.+.+
T Consensus 69 ~~aLvlsGGg~---------~g~~h~G------vl~aL~e-~~l~-~~--~i~GtSaGAi~aa~~~ 115 (298)
T cd07206 69 RTALMLSGGAS---------LGLFHLG------VVKALWE-QDLL-PR--VISGSSAGAIVAALLG 115 (298)
T ss_pred CEEEEEcCcHH---------HHHHHHH------HHHHHHH-cCCC-CC--EEEEEcHHHHHHHHHH
Confidence 45788899972 2344333 4555555 4654 22 6999999997766655
No 162
>PRK03204 haloalkane dehalogenase; Provisional
Probab=23.29 E-value=1.5e+02 Score=27.15 Aligned_cols=52 Identities=15% Similarity=0.121 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeecccc
Q 035542 90 RVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGF 148 (300)
Q Consensus 90 ~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~ 148 (300)
..+.+.+.++++. + +.+++++.|+|.||.=+...+ ...|..++-.++.+++.
T Consensus 85 ~~~~~~~~~~~~~--~-~~~~~~lvG~S~Gg~va~~~a----~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 85 DEHARVIGEFVDH--L-GLDRYLSMGQDWGGPISMAVA----VERADRVRGVVLGNTWF 136 (286)
T ss_pred HHHHHHHHHHHHH--h-CCCCEEEEEECccHHHHHHHH----HhChhheeEEEEECccc
Confidence 3455566666663 2 346799999999996543333 23343333334445443
No 163
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=23.24 E-value=1.2e+02 Score=32.28 Aligned_cols=82 Identities=26% Similarity=0.314 Sum_probs=58.7
Q ss_pred CCcccCCCCCceeee-cCCCCCCccEEEEecccceeCCccccc------------------------ccccc--------
Q 035542 39 GAVCLDCSPPTYHFD-KGFGAGINNWLVFVEGGGWCNDVTTCH------------------------GTNLH-------- 85 (300)
Q Consensus 39 ga~ClDGSp~~yy~~-~g~g~gs~~wli~leGGG~C~~~~~C~------------------------~~~l~-------- 85 (300)
-|+=-||+.--||+- ||....+++.++|=-||-----.-.-. +-.+|
T Consensus 398 ~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nr 477 (648)
T COG1505 398 FATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENK 477 (648)
T ss_pred EEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcc
Confidence 467789999888775 563334788999988884221111000 12222
Q ss_pred cchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHH
Q 035542 86 FREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGF 121 (300)
Q Consensus 86 frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~ 121 (300)
.+..+-+-||.++|.. .|+..|+++=+-|.|=||+
T Consensus 478 q~vfdDf~AVaedLi~-rgitspe~lgi~GgSNGGL 512 (648)
T COG1505 478 QNVFDDFIAVAEDLIK-RGITSPEKLGIQGGSNGGL 512 (648)
T ss_pred hhhhHHHHHHHHHHHH-hCCCCHHHhhhccCCCCce
Confidence 3557788999999999 7999999999999999995
No 164
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=22.79 E-value=1.4e+02 Score=29.03 Aligned_cols=46 Identities=20% Similarity=0.289 Sum_probs=31.4
Q ss_pred chHHHHHHHHHHHhhcc-CCCCCCeEEEeecChhHHHHHHhHHHHHh
Q 035542 87 REARVFLAVMKDLLTVK-GMINAQNAILSGCSAGGFASILYCDNFRA 132 (300)
Q Consensus 87 rG~~i~~avl~~l~~~~-gl~~a~~vilsG~SAGG~g~~~~~d~v~~ 132 (300)
|-..-+.+.+++|...+ |..+.++|+|.|+|-|..-++.+......
T Consensus 85 ~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~ 131 (303)
T PF08538_consen 85 RDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNP 131 (303)
T ss_dssp HHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT
T ss_pred hHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCc
Confidence 33667888999999842 34578999999999999988877666553
No 165
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=22.71 E-value=1.2e+02 Score=24.80 Aligned_cols=33 Identities=24% Similarity=0.364 Sum_probs=20.3
Q ss_pred HHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHH
Q 035542 94 AVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDN 129 (300)
Q Consensus 94 avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~ 129 (300)
+-++.+.+..+..+ ++|.|+|.||.-+...+..
T Consensus 76 ~~~~~~~~~~~~~~---~~l~G~S~Gg~~~~~~~~~ 108 (282)
T COG0596 76 DDLAALLDALGLEK---VVLVGHSMGGAVALALALR 108 (282)
T ss_pred HHHHHHHHHhCCCc---eEEEEecccHHHHHHHHHh
Confidence 33444444344444 9999999998666544443
No 166
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=22.56 E-value=1.1e+02 Score=27.89 Aligned_cols=34 Identities=24% Similarity=0.183 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHH
Q 035542 88 EARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFAS 123 (300)
Q Consensus 88 G~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~ 123 (300)
++.-+++..++.+.+ ..+-.-+||+|+|-|+.-.
T Consensus 76 ay~DV~~AF~~yL~~--~n~GRPfILaGHSQGs~~l 109 (207)
T PF11288_consen 76 AYSDVRAAFDYYLAN--YNNGRPFILAGHSQGSMHL 109 (207)
T ss_pred hHHHHHHHHHHHHHh--cCCCCCEEEEEeChHHHHH
Confidence 456667777777773 6777899999999999543
No 167
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=22.49 E-value=1.5e+02 Score=31.09 Aligned_cols=119 Identities=17% Similarity=0.172 Sum_probs=65.3
Q ss_pred ccEEEEecccceeCCccccc------------------c------ccccc---------chHHHHHHHHHHHhhccC-C-
Q 035542 61 NNWLVFVEGGGWCNDVTTCH------------------G------TNLHF---------REARVFLAVMKDLLTVKG-M- 105 (300)
Q Consensus 61 ~~wli~leGGG~C~~~~~C~------------------~------~~l~f---------rG~~i~~avl~~l~~~~g-l- 105 (300)
...||.+-|||+=....+=. + .-||+ .|..-=+-.|.|+.+|.. +
T Consensus 135 ~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFG 214 (601)
T KOG4389|consen 135 LTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFG 214 (601)
T ss_pred ceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhC
Confidence 45889999999865533322 0 01333 444445556777777422 2
Q ss_pred CCCCeEEEeecChhHHHHHHhHHHHHhhCCCccE---EEEeeccccccccCCCCchhHHHHHHHHHHHhhccCccCC---
Q 035542 106 INAQNAILSGCSAGGFASILYCDNFRALFPVGTR---VKCLADAGFFINVKDISDASHIEEFFAQVVATHGSIKHLP--- 179 (300)
Q Consensus 106 ~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~---v~~l~DSG~Fld~~~~~g~~~~~~~~~~~~~l~~~~~~lp--- 179 (300)
.++++|-|.|.|||+-.+.+|. +-+..+ -+++.-||-+-+.-.+.+....++.-..+.++-|+.+.=+
T Consensus 215 Gnp~~vTLFGESAGaASv~aHL------lsP~S~glF~raIlQSGS~~~pWA~~s~~~A~~~s~~La~lvgC~~~~~~~i 288 (601)
T KOG4389|consen 215 GNPSRVTLFGESAGAASVVAHL------LSPGSRGLFHRAILQSGSLNNPWAIVSPGEARQRSTALANLVGCNKTNDTEI 288 (601)
T ss_pred CCcceEEEeccccchhhhhhee------cCCCchhhHHHHHhhcCCCCCCccccChHHHHHHHHHHHHHhCCCCCChHHH
Confidence 4799999999999997766553 211111 1244556655443333333333333344455556654322
Q ss_pred cccccc
Q 035542 180 ASCTKR 185 (300)
Q Consensus 180 ~~C~~~ 185 (300)
-+|.+.
T Consensus 289 ~~ClR~ 294 (601)
T KOG4389|consen 289 VACLRS 294 (601)
T ss_pred HHHHhc
Confidence 347764
No 168
>PLN02578 hydrolase
Probab=22.34 E-value=2.4e+02 Score=26.80 Aligned_cols=19 Identities=16% Similarity=0.345 Sum_probs=16.0
Q ss_pred hhhhcCCCceEEeechhhH
Q 035542 197 YVAGQVITPLFIINSAYDR 215 (300)
Q Consensus 197 ~~~~~i~tP~Fi~~s~YD~ 215 (300)
..++.|+.|+.+|+...|.
T Consensus 290 ~~l~~i~~PvLiI~G~~D~ 308 (354)
T PLN02578 290 SLLSKLSCPLLLLWGDLDP 308 (354)
T ss_pred HHhhcCCCCEEEEEeCCCC
Confidence 4578899999999999884
No 169
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=22.30 E-value=1.6e+02 Score=28.45 Aligned_cols=45 Identities=27% Similarity=0.333 Sum_probs=29.4
Q ss_pred ccccchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCC
Q 035542 83 NLHFREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFP 135 (300)
Q Consensus 83 ~l~frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp 135 (300)
...=+|....+-|-+-|. ...+++|.|.|+|+||.-+. ++...++
T Consensus 105 ~~~~~~~ql~~~V~~~l~----~~ga~~v~LigHS~GG~~~r----y~~~~~~ 149 (336)
T COG1075 105 SLAVRGEQLFAYVDEVLA----KTGAKKVNLIGHSMGGLDSR----YYLGVLG 149 (336)
T ss_pred cccccHHHHHHHHHHHHh----hcCCCceEEEeecccchhhH----HHHhhcC
Confidence 344455555554444433 35679999999999998887 5555555
No 170
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=22.30 E-value=1.1e+02 Score=30.16 Aligned_cols=37 Identities=11% Similarity=0.237 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHH
Q 035542 90 RVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNF 130 (300)
Q Consensus 90 ~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v 130 (300)
..+++.|+++.. .. -++|+|.|+|.||+=+..-....
T Consensus 104 ~~lk~~ie~~~~---~~-~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 104 TKLKQLIEEAYK---KN-GKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHH---hc-CCcEEEEEeCCCchHHHHHHHhc
Confidence 446667777655 22 78999999999998776555554
No 171
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=22.15 E-value=3.3e+02 Score=26.04 Aligned_cols=39 Identities=15% Similarity=0.063 Sum_probs=30.7
Q ss_pred CCCeEEEeecChhHHHHHHhHHHHHhhCCC----ccEEEEeec
Q 035542 107 NAQNAILSGCSAGGFASILYCDNFRALFPV----GTRVKCLAD 145 (300)
Q Consensus 107 ~a~~vilsG~SAGG~g~~~~~d~v~~~lp~----~~~v~~l~D 145 (300)
+...+.|+|.|-||.-+..-+.+|.+.-.+ ..+++++.=
T Consensus 134 ~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~I 176 (415)
T PF00450_consen 134 RSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAI 176 (415)
T ss_dssp TTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEE
T ss_pred cCCCEEEEccccccccchhhHHhhhhcccccccccccccccee
Confidence 455899999999998888888888877643 577877764
No 172
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=22.06 E-value=33 Score=32.32 Aligned_cols=42 Identities=24% Similarity=0.200 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHh
Q 035542 90 RVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRA 132 (300)
Q Consensus 90 ~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~ 132 (300)
.--++++|+|+.+ -.-+-.+++|.|-|-||.-|+.-+...++
T Consensus 131 lDs~avldyl~t~-~~~dktkivlfGrSlGGAvai~lask~~~ 172 (300)
T KOG4391|consen 131 LDSEAVLDYLMTR-PDLDKTKIVLFGRSLGGAVAIHLASKNSD 172 (300)
T ss_pred ccHHHHHHHHhcC-ccCCcceEEEEecccCCeeEEEeeccchh
Confidence 3468999999994 44455789999999999444433333333
No 173
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=21.90 E-value=91 Score=30.52 Aligned_cols=13 Identities=38% Similarity=0.570 Sum_probs=11.3
Q ss_pred CCeEEEeecChhH
Q 035542 108 AQNAILSGCSAGG 120 (300)
Q Consensus 108 a~~vilsG~SAGG 120 (300)
--++.|+|+|-||
T Consensus 275 da~iwlTGHSLGG 287 (425)
T COG5153 275 DARIWLTGHSLGG 287 (425)
T ss_pred CceEEEeccccch
Confidence 3479999999999
No 174
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=21.90 E-value=91 Score=30.52 Aligned_cols=13 Identities=38% Similarity=0.570 Sum_probs=11.3
Q ss_pred CCeEEEeecChhH
Q 035542 108 AQNAILSGCSAGG 120 (300)
Q Consensus 108 a~~vilsG~SAGG 120 (300)
--++.|+|+|-||
T Consensus 275 da~iwlTGHSLGG 287 (425)
T KOG4540|consen 275 DARIWLTGHSLGG 287 (425)
T ss_pred CceEEEeccccch
Confidence 3479999999999
No 175
>PLN02761 lipase class 3 family protein
Probab=21.62 E-value=1.9e+02 Score=30.29 Aligned_cols=24 Identities=13% Similarity=0.202 Sum_probs=18.5
Q ss_pred CeEEEeecChhHHHHHHhHHHHHh
Q 035542 109 QNAILSGCSAGGFASILYCDNFRA 132 (300)
Q Consensus 109 ~~vilsG~SAGG~g~~~~~d~v~~ 132 (300)
-+|+++|+|-||-=|.+.+..++.
T Consensus 294 ~sItVTGHSLGGALAtLaA~DIa~ 317 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDIAE 317 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHHHH
Confidence 489999999999666666666654
No 176
>PRK03592 haloalkane dehalogenase; Provisional
Probab=21.51 E-value=2.8e+02 Score=25.02 Aligned_cols=34 Identities=21% Similarity=0.256 Sum_probs=22.3
Q ss_pred CeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeecc
Q 035542 109 QNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADA 146 (300)
Q Consensus 109 ~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DS 146 (300)
++++|.|.|.||.=++.. ..+.|+.++-.++.++
T Consensus 93 ~~~~lvGhS~Gg~ia~~~----a~~~p~~v~~lil~~~ 126 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDW----AARHPDRVRGIAFMEA 126 (295)
T ss_pred CCeEEEEECHHHHHHHHH----HHhChhheeEEEEECC
Confidence 679999999999766533 3445654444444454
No 177
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=21.47 E-value=1.1e+02 Score=29.93 Aligned_cols=47 Identities=15% Similarity=0.367 Sum_probs=30.3
Q ss_pred cEEEEecccceeCCcccccccccccchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhH
Q 035542 62 NWLVFVEGGGWCNDVTTCHGTNLHFREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYC 127 (300)
Q Consensus 62 ~wli~leGGG~C~~~~~C~~~~l~frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~ 127 (300)
+.-+-|+|||. ..++|-| |++-|.+ .|+.- + +++|.|||++-+.+.+
T Consensus 68 ~~aLvlsGGg~---------~g~~h~G------VlkaL~e-~gl~p-~--~i~GsSaGAivaa~~~ 114 (323)
T cd07231 68 RTALLLSGGAA---------LGTFHVG------VVRTLVE-HQLLP-R--VIAGSSVGSIVCAIIA 114 (323)
T ss_pred CEEEEEcCcHH---------HHHHHHH------HHHHHHH-cCCCC-C--EEEEECHHHHHHHHHH
Confidence 56788899972 2344444 5555666 46632 2 5999999997655544
No 178
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional
Probab=21.44 E-value=2.5e+02 Score=25.47 Aligned_cols=70 Identities=13% Similarity=0.207 Sum_probs=44.0
Q ss_pred cceeCCcccc--cccccc--cchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhC-CCccEEEEee
Q 035542 70 GGWCNDVTTC--HGTNLH--FREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALF-PVGTRVKCLA 144 (300)
Q Consensus 70 GG~C~~~~~C--~~~~l~--frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~l-p~~~~v~~l~ 144 (300)
|.|.+|.... ++..+. --|+..+..++..+.. .-+++..+|+-.||..|.+.. .+++.+ .+..+|.++-
T Consensus 16 ~~~~f~~~~a~~yd~~~~~~~p~y~~~~~~~~~~~~-~~~~~~~~vLDlGcGtG~~~~-----~l~~~~~~~~~~v~gvD 89 (247)
T PRK15451 16 GDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAE-RFVQPGTQVYDLGCSLGAATL-----SVRRNIHHDNCKIIAID 89 (247)
T ss_pred CCCccChHHHHhhhhHHHhcCCChHHHHHHHHHHHH-HhCCCCCEEEEEcccCCHHHH-----HHHHhcCCCCCeEEEEe
Confidence 6788776432 222121 3577788888777776 456677899999999998654 234433 2356666654
Q ss_pred c
Q 035542 145 D 145 (300)
Q Consensus 145 D 145 (300)
=
T Consensus 90 ~ 90 (247)
T PRK15451 90 N 90 (247)
T ss_pred C
Confidence 3
No 179
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=21.37 E-value=89 Score=27.85 Aligned_cols=26 Identities=19% Similarity=0.509 Sum_probs=17.7
Q ss_pred HHHHHHHHhhccCCCCCCeEEEeecCh
Q 035542 92 FLAVMKDLLTVKGMINAQNAILSGCSA 118 (300)
Q Consensus 92 ~~avl~~l~~~~gl~~a~~vilsG~SA 118 (300)
+++++++|++ ..--++.++++-|||-
T Consensus 3 ~~~~~~El~~-~a~l~~g~i~VvGcST 28 (172)
T PF04260_consen 3 LRQALEELLE-QANLKPGQIFVVGCST 28 (172)
T ss_dssp HHHHHHHHHH-HS---TT-EEEEEE-H
T ss_pred HHHHHHHHHH-hcCCCCCCEEEEeeeH
Confidence 6788999998 5666788999999994
No 180
>PLN02847 triacylglycerol lipase
Probab=21.06 E-value=2e+02 Score=30.70 Aligned_cols=23 Identities=30% Similarity=0.368 Sum_probs=17.4
Q ss_pred CeEEEeecChhH-HHHHHhHHHHHh
Q 035542 109 QNAILSGCSAGG-FASILYCDNFRA 132 (300)
Q Consensus 109 ~~vilsG~SAGG-~g~~~~~d~v~~ 132 (300)
-+|+++|+|-|| +|+++ +-.+++
T Consensus 251 YkLVITGHSLGGGVAALL-AilLRe 274 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALL-TYILRE 274 (633)
T ss_pred CeEEEeccChHHHHHHHH-HHHHhc
Confidence 389999999999 56665 555664
No 181
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=21.04 E-value=73 Score=29.58 Aligned_cols=30 Identities=20% Similarity=0.290 Sum_probs=21.1
Q ss_pred HHHHHHHHHhhccCCCC------CCeEEEeecChhHH
Q 035542 91 VFLAVMKDLLTVKGMIN------AQNAILSGCSAGGF 121 (300)
Q Consensus 91 i~~avl~~l~~~~gl~~------a~~vilsG~SAGG~ 121 (300)
|..-.|..|.+ +|+.+ ..=++..|+|||+.
T Consensus 94 NTF~LL~~lke-~gld~iIr~~vk~G~~YiG~SAGA~ 129 (224)
T COG3340 94 NTFNLLQELKE-TGLDDIIRERVKAGTPYIGWSAGAN 129 (224)
T ss_pred hHHHHHHHHHH-hCcHHHHHHHHHcCCceEEeccCce
Confidence 67777777777 56654 23456889999983
No 182
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=20.73 E-value=3.3e+02 Score=26.18 Aligned_cols=69 Identities=16% Similarity=0.233 Sum_probs=38.4
Q ss_pred EEecccceeCCcccccccccccchHHHHHHHHHHHhhccCCCCCCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEee
Q 035542 65 VFVEGGGWCNDVTTCHGTNLHFREARVFLAVMKDLLTVKGMINAQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLA 144 (300)
Q Consensus 65 i~leGGG~C~~~~~C~~~~l~frG~~i~~avl~~l~~~~gl~~a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~ 144 (300)
|-|-|+|.=... +....|--..-+..+.+...+ +... .+.|.|.|.||+=++. ++..+|..++-.++-
T Consensus 92 iDl~G~g~~s~~----~~~~~y~~~~~v~~i~~~~~~---~~~~-~~~lvghS~Gg~va~~----~Aa~~P~~V~~lv~~ 159 (326)
T KOG1454|consen 92 IDLPGHGYSSPL----PRGPLYTLRELVELIRRFVKE---VFVE-PVSLVGHSLGGIVALK----AAAYYPETVDSLVLL 159 (326)
T ss_pred EecCCCCcCCCC----CCCCceehhHHHHHHHHHHHh---hcCc-ceEEEEeCcHHHHHHH----HHHhCcccccceeee
Confidence 556666651111 223335445555555554444 2223 3999999999976654 455577666655533
Q ss_pred c
Q 035542 145 D 145 (300)
Q Consensus 145 D 145 (300)
|
T Consensus 160 ~ 160 (326)
T KOG1454|consen 160 D 160 (326)
T ss_pred c
Confidence 3
No 183
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=20.56 E-value=2.2e+02 Score=26.80 Aligned_cols=33 Identities=15% Similarity=0.056 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhhccC-------CCCCCeEEEeecChhHHH
Q 035542 90 RVFLAVMKDLLTVKG-------MINAQNAILSGCSAGGFA 122 (300)
Q Consensus 90 ~i~~avl~~l~~~~g-------l~~a~~vilsG~SAGG~g 122 (300)
..++-.+|||.-+.| -.+..++|++|.|.++.+
T Consensus 18 ~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~ 57 (257)
T cd07387 18 LSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKST 57 (257)
T ss_pred HHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccc
Confidence 456778888875322 223458999999999875
No 184
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=20.53 E-value=2.6e+02 Score=27.67 Aligned_cols=62 Identities=16% Similarity=0.216 Sum_probs=37.2
Q ss_pred ccccch---HHHHHHHHHHHhhccCCCC-CCeEEEeecChhHHHHHHhHHHHHhhCCCccEEEEeeccccc
Q 035542 83 NLHFRE---ARVFLAVMKDLLTVKGMIN-AQNAILSGCSAGGFASILYCDNFRALFPVGTRVKCLADAGFF 149 (300)
Q Consensus 83 ~l~frG---~~i~~avl~~l~~~~gl~~-a~~vilsG~SAGG~g~~~~~d~v~~~lp~~~~v~~l~DSG~F 149 (300)
.+.||+ ..+++.+.+.|.+-.++++ -+.+++.|+--|++.+ -+...+.++.++....++|.|
T Consensus 39 eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea-----~~~Nll~~g~~~~~~~~tG~f 104 (364)
T PRK12462 39 GMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSM-----IPMNFSRPGAAAPEYVTTGYW 104 (364)
T ss_pred ccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHH-----HHHHcCCCCCcEEEEEeCCHH
Confidence 478888 4566666666666545654 4456666765566554 455666544445435667766
No 185
>COG0400 Predicted esterase [General function prediction only]
Probab=20.43 E-value=98 Score=28.07 Aligned_cols=28 Identities=25% Similarity=0.400 Sum_probs=20.6
Q ss_pred HHHHHHHHhhccCCCCCCeEEEeecChhH
Q 035542 92 FLAVMKDLLTVKGMINAQNAILSGCSAGG 120 (300)
Q Consensus 92 ~~avl~~l~~~~gl~~a~~vilsG~SAGG 120 (300)
+.+.++++...+|++ .+++++.|.|-|+
T Consensus 83 ~~~~l~~~~~~~gi~-~~~ii~~GfSqGA 110 (207)
T COG0400 83 LAEFLEELAEEYGID-SSRIILIGFSQGA 110 (207)
T ss_pred HHHHHHHHHHHhCCC-hhheEEEecChHH
Confidence 344444455547877 8899999999999
No 186
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=20.13 E-value=3.8e+02 Score=21.48 Aligned_cols=58 Identities=17% Similarity=0.272 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHhhccCCCCCCeEEEeec--C------hhHH-HHHHhHHHHHhhCCCccEEEEeeccc
Q 035542 88 EARVFLAVMKDLLTVKGMINAQNAILSGC--S------AGGF-ASILYCDNFRALFPVGTRVKCLADAG 147 (300)
Q Consensus 88 G~~i~~avl~~l~~~~gl~~a~~vilsG~--S------AGG~-g~~~~~d~v~~~lp~~~~v~~l~DSG 147 (300)
+..|+-..+.+.+...|++.-. ++|.-. + .|.- -=......+.+.+| ..++.++-|||
T Consensus 8 SPwnly~~l~~Fl~~~~~P~G~-~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP-~~kfiLIGDsg 74 (100)
T PF09949_consen 8 SPWNLYPFLRDFLRRNGFPAGP-LLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFP-ERKFILIGDSG 74 (100)
T ss_pred CHHHHHHHHHHHHHhcCCCCCc-eEcccCCccccccccCCchhHHHHHHHHHHHHCC-CCcEEEEeeCC
Confidence 3456667777777656788755 554433 1 2222 22344566677788 46899999998
Done!