BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035556
MKGTRKKRDKVEGTWISSSLSITKRTRKKRKKLGTSIESLPHALLTEVMAQVASTSLVDL
SRLKLSCKYFLQAADDDFVFEHASLDKFYVVWPMTDRHASLFLMRCKKSGNPEALYRQGM
HDYFSLGLTNSGFRLLKRAADKKHPEATYVYTIIMLLCCGSQFKKQGFELLSSLKSTYGI
RECRTKIRAGVINSLWIRNITVDQHGEYSAETCDCLRTRMRGWDDGLDKLIGSCESCLCV
TEVNFFCDLLRSSSCCKEWSF

High Scoring Gene Products

Symbol, full name Information P value
AT1G67623 protein from Arabidopsis thaliana 2.6e-22
AT1G74875 protein from Arabidopsis thaliana 4.0e-19
AT2G35280 protein from Arabidopsis thaliana 1.0e-10
AT3G30430 protein from Arabidopsis thaliana 1.2e-06
AT1G67340 protein from Arabidopsis thaliana 0.00020

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035556
        (261 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2824055 - symbol:AT1G67623 "AT1G67623" species...   259  2.6e-22   1
TAIR|locus:5019474674 - symbol:AT1G74875 "AT1G74875" spec...   229  4.0e-19   1
TAIR|locus:2063454 - symbol:AT2G35280 "AT2G35280" species...   150  1.0e-10   1
TAIR|locus:2093325 - symbol:AT3G30430 "AT3G30430" species...   115  1.2e-06   1
TAIR|locus:2019604 - symbol:AT1G67340 "AT1G67340" species...   116  0.00020   1


>TAIR|locus:2824055 [details] [associations]
            symbol:AT1G67623 "AT1G67623" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
            SMART:SM00256 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC008113
            IPI:IPI00537982 PIR:F96699 RefSeq:NP_176929.1 UniGene:At.52422
            ProteinModelPortal:Q9FXC7 EnsemblPlants:AT1G67623.1 GeneID:843084
            KEGG:ath:AT1G67623 TAIR:At1g67623 eggNOG:NOG240091
            HOGENOM:HOG000112525 InParanoid:Q9FXC7 OMA:SFRRICD PhylomeDB:Q9FXC7
            ProtClustDB:CLSN2682004 Genevestigator:Q9FXC7 Uniprot:Q9FXC7
        Length = 296

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 73/202 (36%), Positives = 109/202 (53%)

Query:    37 IESLPHALLTEVMAQVASTSLVDLSRLKLSCKYFLQAADDDFVFEHASLDKF-YVVWPMT 95
             ++SLP  LL E+ +   ++SL  +  L+L  K F +  D+ +VF   SL +  ++ W   
Sbjct:    24 LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPW--- 80

Query:    96 DRHASLFLMRCKKSGNPEALYRQGMHDYFSLGLTNSGFRLLKRAADKKHPEATYVYTIIM 155
               +++ F+ RC +S NPEAL+++G  +YF   L + G   L  AA+K   EA YVY +I 
Sbjct:    81 HENSAKFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVI- 139

Query:   156 LLCCGSQFKKQGFELLSS----LKSTY--GIRECRTKIRAGVINSLWIRNITVDQ-HGEY 208
             L+C G + K++GFE+LSS    L ST    + E R KI+       W  N  V+Q    Y
Sbjct:   140 LICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTVVEQLKTAY 199

Query:   209 SAETCDC-LRTRM------RGW 223
              +E C C  +TRM      RGW
Sbjct:   200 VSEKCKCDCKTRMLLLVMNRGW 221


>TAIR|locus:5019474674 [details] [associations]
            symbol:AT1G74875 "AT1G74875" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 IPI:IPI00938606 RefSeq:NP_001154471.1
            UniGene:At.74467 ProteinModelPortal:F4HXC5 SMR:F4HXC5
            EnsemblPlants:AT1G74875.1 GeneID:7922311 KEGG:ath:AT1G74875
            OMA:SACEICL Uniprot:F4HXC5
        Length = 243

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 74/220 (33%), Positives = 115/220 (52%)

Query:    48 VMAQVASTSLVDLSRLKLSCKYFLQAADDDFVFEHASLDKFYVVWPMTDRHA-SLFLMRC 106
             ++  V S+SL +   L+L  K F + ++D ++ +  SL+K  ++ P  +R     F  RC
Sbjct:    23 LVINVLSSSLSEFRNLQLVSKSFKRISNDRYILQRLSLNKIPLL-PWRNRKKFHNFFKRC 81

Query:   107 KKSGNPEALYRQGMHDYFSLGL----TNSGFRLLKRAADKKHPEATYVYTIIMLLCCGSQ 162
             +KSGN EA+YR+G+ DYF         + G + + + A+  + EA YVY +I L+C G +
Sbjct:    82 RKSGNLEAIYRKGLVDYFHRDSHERQRDRGLKHIAKTANNGNQEAQYVYGLI-LICLGGK 140

Query:   163 FKKQGFELLSSLKS----TYGIRECRTKIRAGVINSLWIRNITVDQHGE--YSAETCDCL 216
              K+ GF++LSSL+     +  I+E   K R  + N +W     + +H +  Y  E C+C 
Sbjct:   141 TKQNGFKILSSLRKPLMLSNTIKEME-KHRTHIRN-MWWWGEPMMRHLQKSYVRENCNCD 198

Query:   217 -RT--------RMRGWDDGLDKLIGS-CESCLCVTEVNFF 246
              RT        R R  +D  D L  S CE CLC  EV  F
Sbjct:   199 GRTEIFPNYCFRHRFGEDD-DMLTSSACEICLCHHEVKLF 237


>TAIR|locus:2063454 [details] [associations]
            symbol:AT2G35280 "AT2G35280" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] PROSITE:PS50181 EMBL:CP002685 EMBL:AC004667
            EMBL:DQ446599 EMBL:AY500336 IPI:IPI00538416 PIR:F84766
            RefSeq:NP_850243.1 UniGene:At.49286 ProteinModelPortal:Q1PEW8
            SMR:Q1PEW8 EnsemblPlants:AT2G35280.1 GeneID:818095
            KEGG:ath:AT2G35280 TAIR:At2g35280 eggNOG:NOG281700 OMA:WIDEEEC
            PhylomeDB:Q1PEW8 ProtClustDB:CLSN2684668 Genevestigator:Q1PEW8
            Uniprot:Q1PEW8
        Length = 163

 Score = 150 (57.9 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 43/139 (30%), Positives = 73/139 (52%)

Query:    37 IESLPHALLTEVMAQVASTSLVDLSRLKLSCKYFLQAADDDFVFEHASLDKFYVVWPMTD 96
             +E+LP  LL E++A++   S  D     LSCK    +A+D+ V +  +L    V  P++ 
Sbjct:    11 LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNL-ALLVKKPLSC 69

Query:    97 RHASLFLMRCKKSGNPEALYRQGMHDYFSLGLTNSGFRLLKRAADKKHPEATYVYTIIML 156
             R   L + +C  + NP+A Y +G+  YF+L   +     +  AA+    EA Y+Y ++ L
Sbjct:    70 RKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCDVDLHHIGIAANGGQKEAIYMYAML-L 128

Query:   157 LCCGSQFKKQGFELLSSLK 175
             LC G    ++G   +S L+
Sbjct:   129 LCRGRT--EEGKTYMSQLE 145


>TAIR|locus:2093325 [details] [associations]
            symbol:AT3G30430 "AT3G30430" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR
            ProtClustDB:CLSN2684668 EMBL:BT029251 IPI:IPI00532301
            RefSeq:NP_189663.1 UniGene:At.50995 DNASU:822752
            EnsemblPlants:AT3G30430.1 GeneID:822752 KEGG:ath:AT3G30430
            TAIR:At3g30430 HOGENOM:HOG000201001 PhylomeDB:Q058G7
            Genevestigator:Q058G7 Uniprot:Q058G7
        Length = 114

 Score = 115 (45.5 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 32/105 (30%), Positives = 55/105 (52%)

Query:    37 IESLPHALLTEVMAQVASTSLVDLSRLKLSCKYFLQAADDDFVFEHASLDKFYVVWPMTD 96
             +E LP  LL E++A++ +    D     LSCK    +A+D+ V +  +L    V  P++ 
Sbjct:    11 LEVLPQDLLGEIVAKIGAKYAEDYHNCILSCKELGASANDERVLKTLNLAPL-VKKPLSC 69

Query:    97 RHASLFLMRCKKSGNPEALYRQGMHDYFSLGLTNSGFRLLKRAAD 141
             R   L + +C  + NP+A Y +G+  YF+L   + G   +  AA+
Sbjct:    70 RKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCDVGLHHIGIAAN 114


>TAIR|locus:2019604 [details] [associations]
            symbol:AT1G67340 "AT1G67340" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR002893 InterPro:IPR011990 Pfam:PF01753
            PROSITE:PS50181 UniPathway:UPA00143 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0008270 GO:GO:0016567
            Gene3D:1.25.40.10 InterPro:IPR006597 Pfam:PF08238 EMBL:AC002130
            eggNOG:NOG317292 HOGENOM:HOG000238617 ProtClustDB:CLSN2687031
            EMBL:AY057623 EMBL:AY093102 EMBL:BT000146 IPI:IPI00541988
            PIR:H96696 RefSeq:NP_564894.1 UniGene:At.25264
            ProteinModelPortal:Q9FYF9 SMR:Q9FYF9 IntAct:Q9FYF9 STRING:Q9FYF9
            PaxDb:Q9FYF9 PRIDE:Q9FYF9 EnsemblPlants:AT1G67340.1 GeneID:843055
            KEGG:ath:AT1G67340 TAIR:At1g67340 InParanoid:Q9FYF9 OMA:LCADAGN
            PhylomeDB:Q9FYF9 Genevestigator:Q9FYF9 Uniprot:Q9FYF9
        Length = 379

 Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
 Identities = 33/120 (27%), Positives = 54/120 (45%)

Query:    37 IESLPHALLTEVMAQVASTSL--VDLSRLKLSCKYFLQAADDDFVFEHASLDKFYVVWPM 94
             ++S+P  L+  ++ ++ STS    D   + L+CK     A +  V    S     V    
Sbjct:    44 LDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVKAHN 103

Query:    95 TDRHASLFLMRCKKSGNPEALYRQGMHDYFSLGLTNSGFRLLKRAADKKHPEATYVYTII 154
                ++  FL RC  +G+ EA Y  GM  ++ L    +G  L+ +AA   H  A Y   +I
Sbjct:   104 WSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSLAVI 163


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.136   0.433    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      261       240   0.00093  113 3  11 22  0.36    33
                                                     32  0.44    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  212 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.58u 0.10s 17.68t   Elapsed:  00:00:00
  Total cpu time:  17.58u 0.10s 17.68t   Elapsed:  00:00:00
  Start:  Thu May  9 21:19:10 2013   End:  Thu May  9 21:19:10 2013

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