BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035558
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LPV9|LWD1_ARATH WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1
PE=2 SV=1
Length = 346
Score = 494 bits (1271), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/253 (94%), Positives = 246/253 (97%)
Query: 1 ECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGT 60
ECQ+PDLLATSSDFLR+WRI+D+ RVELKS LN NKNSE+CGPLTSFDWNEAEPRRIGT
Sbjct: 94 ECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGT 153
Query: 61 SSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHST 120
SS DTTCTIWDIEREAVDTQLIAHDKEV+DIAWGGVGVFASVSADGSVRVFDLRDKEHST
Sbjct: 154 SSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVFASVSADGSVRVFDLRDKEHST 213
Query: 121 IIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAI 180
IIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFP LPVVELQRHQASVNAI
Sbjct: 214 IIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPALPVVELQRHQASVNAI 273
Query: 181 AWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWV 240
AWAPHSSCHICTAGDDSQALIWD+SSMGQ VEGGLDPILAYTAGAEIEQLQWSSSQPDWV
Sbjct: 274 AWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLDPILAYTAGAEIEQLQWSSSQPDWV 333
Query: 241 AIAFSTKLQILRV 253
AIAFSTKLQILRV
Sbjct: 334 AIAFSTKLQILRV 346
>sp|Q38960|LWD2_ARATH WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2
PE=2 SV=1
Length = 346
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/253 (89%), Positives = 239/253 (94%)
Query: 1 ECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGT 60
ECQ+PDLLATSSDFLR+WRISD++ RVELKS L+ +KNSE+ GP+TSFDWNEAEPRRIGT
Sbjct: 94 ECQRPDLLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGT 153
Query: 61 SSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHST 120
SSIDTTCTIWDIERE VDTQLIAHDKEVYDIAWGGVGVFASVS DGSVRVFDLRDKEHST
Sbjct: 154 SSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVGVFASVSEDGSVRVFDLRDKEHST 213
Query: 121 IIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAI 180
IIYES EP TPLVRL WNKQDPRYMAT+IM SAK+VVLDIRFP LPVVELQRHQASVNAI
Sbjct: 214 IIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIVVLDIRFPALPVVELQRHQASVNAI 273
Query: 181 AWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWV 240
AWAPHSS HIC+AGDDSQALIWD+SSMGQ VEGGLDPILAYTAGAE+EQLQWSSSQPDWV
Sbjct: 274 AWAPHSSSHICSAGDDSQALIWDISSMGQHVEGGLDPILAYTAGAEVEQLQWSSSQPDWV 333
Query: 241 AIAFSTKLQILRV 253
AIAFS KLQILRV
Sbjct: 334 AIAFSNKLQILRV 346
>sp|Q9XGN1|TTG1_ARATH Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1
PE=1 SV=1
Length = 341
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/248 (70%), Positives = 210/248 (84%), Gaps = 2/248 (0%)
Query: 6 DLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDT 65
DLLA+S DFLR+W I+++ VE S+LN +K SE+C PLTSFDWN+ EP+R+GT SIDT
Sbjct: 96 DLLASSGDFLRLWEINEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDT 155
Query: 66 TCTIWDIEREAVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYES 125
TCTIWDIE+ V+TQLIAHDKEV+DIAWG VFASVSADGSVR+FDLRDKEHSTIIYES
Sbjct: 156 TCTIWDIEKSVVETQLIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYES 215
Query: 126 SEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPH 185
+PDTPL+RL WNKQD RYMATI+MDS KVV+LDIR PT+PV EL+RHQASVNAIAWAP
Sbjct: 216 PQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQ 275
Query: 186 SSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFS 245
S HIC+ GDD+QALIW+L ++ P G+DP+ Y+AG+EI QLQWSSSQPDW+ IAF+
Sbjct: 276 SCKHICSGGDDTQALIWELPTVAGP--NGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFA 333
Query: 246 TKLQILRV 253
K+Q+LRV
Sbjct: 334 NKMQLLRV 341
>sp|Q552R1|DCAF7_DICDI DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium
discoideum GN=wdr68 PE=3 SV=2
Length = 325
Score = 327 bits (839), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 160/252 (63%), Positives = 195/252 (77%), Gaps = 6/252 (2%)
Query: 3 QKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
+PDLLAT+ D+LR+W + R ++LKSLL N SE+C PL+SFDWNE +P + TSS
Sbjct: 79 NRPDLLATTGDYLRLWEVGSNQRSIKLKSLLT-NVISEFCAPLSSFDWNETDPSLLATSS 137
Query: 63 IDTTCTIWDIEREAVDTQLIAHDKEVYDIAWG-GVGVFASVSADGSVRVFDLRDKEHSTI 121
IDTTCTIW+IE TQLIAHDKEV+DIA+ G +FASV ADGS+R+FDLR+ EHSTI
Sbjct: 138 IDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASVGADGSLRMFDLRNLEHSTI 197
Query: 122 IYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIA 181
IYE+ PL+RL WNKQDP Y+ATI DS KV++LDIR P++P EL H+++VN I+
Sbjct: 198 IYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIRVPSVPAAELVFHKSAVNGIS 256
Query: 182 WAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVA 241
WAPHSSCHICT DD QALIWDLSSM +P+E DP+L Y A AEI QL WSSSQPDW+A
Sbjct: 257 WAPHSSCHICTVSDDKQALIWDLSSMPKPIE---DPLLTYNALAEINQLSWSSSQPDWIA 313
Query: 242 IAFSTKLQILRV 253
IAFS+ LQIL+V
Sbjct: 314 IAFSSHLQILKV 325
>sp|P61963|DCAF7_MOUSE DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2
SV=1
Length = 342
Score = 320 bits (819), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 161/264 (60%), Positives = 192/264 (72%), Gaps = 21/264 (7%)
Query: 5 PDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSID 64
PDLLATS D+LRVWR+ + + R+E LLN NKNS++C PLTSFDWNE +P +GTSSID
Sbjct: 85 PDLLATSGDYLRVWRVGETETRLE--CLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSID 142
Query: 65 TTCTIWDIEREAV-----------DTQLIAHDKEVYDIAW----GGVGVFASVSADGSVR 109
TTCTIW +E V TQLIAHDKEVYDIA+ GG +FASV ADGSVR
Sbjct: 143 TTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVR 202
Query: 110 VFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVE 169
+FDLR EHSTIIYE + PL+RL WNKQDP Y+AT+ MD +VV+LD+R P PV
Sbjct: 203 MFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVAR 261
Query: 170 LQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQ 229
L H+A VN IAWAPHSSCHICTA DD QALIWD+ M + +E DPILAYTA EI
Sbjct: 262 LNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIE---DPILAYTAEGEINN 318
Query: 230 LQWSSSQPDWVAIAFSTKLQILRV 253
+QW+S+QPDW+AI ++ L+ILRV
Sbjct: 319 VQWASTQPDWIAICYNNCLEILRV 342
>sp|P61962|DCAF7_HUMAN DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1
SV=1
Length = 342
Score = 320 bits (819), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 161/264 (60%), Positives = 192/264 (72%), Gaps = 21/264 (7%)
Query: 5 PDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSID 64
PDLLATS D+LRVWR+ + + R+E LLN NKNS++C PLTSFDWNE +P +GTSSID
Sbjct: 85 PDLLATSGDYLRVWRVGETETRLE--CLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSID 142
Query: 65 TTCTIWDIEREAV-----------DTQLIAHDKEVYDIAW----GGVGVFASVSADGSVR 109
TTCTIW +E V TQLIAHDKEVYDIA+ GG +FASV ADGSVR
Sbjct: 143 TTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVR 202
Query: 110 VFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVE 169
+FDLR EHSTIIYE + PL+RL WNKQDP Y+AT+ MD +VV+LD+R P PV
Sbjct: 203 MFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVAR 261
Query: 170 LQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQ 229
L H+A VN IAWAPHSSCHICTA DD QALIWD+ M + +E DPILAYTA EI
Sbjct: 262 LNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIE---DPILAYTAEGEINN 318
Query: 230 LQWSSSQPDWVAIAFSTKLQILRV 253
+QW+S+QPDW+AI ++ L+ILRV
Sbjct: 319 VQWASTQPDWIAICYNNCLEILRV 342
>sp|Q12523|YP247_YEAST WD repeat-containing protein YPL247C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YPL247C PE=1 SV=1
Length = 523
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 132/237 (55%), Gaps = 35/237 (14%)
Query: 5 PDLLATSSDFLRVWRISDEDRRVELK---SLLNGNK----------NSEYCG---PLTSF 48
P LAT SD LR+W +S E+R+ + + SL N+ + + G P+TSF
Sbjct: 190 PRKLATCSDSLRIWSVSPEERQFQEQINLSLCKYNRQHPANPAAADDMKVIGTFPPITSF 249
Query: 49 DWNEAEPRRIGTSSIDTTCTIWDIER-EAVDTQLIAHDKEVYDIAW--GGVGVFASVSAD 105
DWN + I +SSIDTTC +WD++ V TQLIAHD EV+D+ + +FAS D
Sbjct: 250 DWNTVDTNLIISSSIDTTCIVWDLQSSHYVKTQLIAHDSEVFDVRFLTKSTQLFASCGGD 309
Query: 106 GSVRVFDLRDKEHSTIIYE----------------SSEPDTPLVRLGWNKQDPRYMATII 149
GSVRVFDLR HSTIIYE SS+ L+RL + DP +AT
Sbjct: 310 GSVRVFDLRSLAHSTIIYEPPSSSVSGATAGTITPSSKGSDALLRLEPSPYDPNVLATFA 369
Query: 150 MDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSS 206
DS K+++LD+R P P++ LQ H +SVN I W P + + GDD Q L WDL+S
Sbjct: 370 ADSNKIIILDMRNPESPILNLQGHGSSVNGIKWHPTKRNVLLSCGDDCQVLYWDLNS 426
>sp|O74763|YBE8_SCHPO Uncharacterized WD repeat-containing protein C17D11.08
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC17D11.08 PE=1 SV=1
Length = 435
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 131/237 (55%), Gaps = 23/237 (9%)
Query: 7 LLATSSDFLRVWRISDE---DRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSI 63
LLA++ LR+W+ E D + ++ L+ + + PLTSFDW + +P I SS+
Sbjct: 128 LLASTDQQLRLWKTDFEAGIDSPLLCQASLSTHVKTHNNAPLTSFDWCKTDPSYIVVSSL 187
Query: 64 DTTCTIWDIEREAVDTQLIAHDKEVYDIAW--GGVGVFASVSADGSVRVFDLRDKEHSTI 121
DTTCT+WDI + TQLIAHDKEVYD+A+ + VF SV ADGSVR+FDLR +HSTI
Sbjct: 188 DTTCTVWDIVAQQSKTQLIAHDKEVYDVAFLKDSINVFVSVGADGSVRMFDLRSLDHSTI 247
Query: 122 IYE--------------SSEP-DTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLP 166
IYE +S P PL+RL D MAT +S+ V ++DIR P
Sbjct: 248 IYEGDSTFWKRNGDYTNASPPVSAPLLRLSACDSDVNLMATFHHNSSDVQMIDIRVPGTA 307
Query: 167 VVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTA 223
L+ H+ VNA+ W P S + T GDD +WDL QPV P L+ +
Sbjct: 308 YATLRGHKGDVNAVKWMPGSKSKLATCGDDCVVSLWDLD---QPVNPSPAPTLSVSG 361
>sp|Q75C99|HAT2_ASHGO Histone acetyltransferase type B subunit 2 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=HAT2 PE=3 SV=1
Length = 423
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 60 TSSIDTTCTIWDIER-EAVDTQLIAHDKEVYDIAWGGV--GVFASVSADGSVRVFDLRDK 116
+ S DTT +WDIE + + L +HD V D+ W VF +VS D +++V D R +
Sbjct: 204 SGSDDTTVALWDIEAAKKPKSILTSHDDIVNDVKWHEFESNVFGTVSEDKTLQVHDKRVR 263
Query: 117 EHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQAS 176
++ +P L ++K +A +DS ++ + D+R + P+ + HQ S
Sbjct: 264 LEPVKKLPTA---SPFNTLSFSKHSRNLLAAAGVDS-QIYLYDMRDMSSPLHVMSGHQDS 319
Query: 177 VNAIAWAPHSSCHICTAGDDSQALIWDLSSMG 208
V + ++PH+ IC++G D +A+IWDL+ +G
Sbjct: 320 VTTVEFSPHTDGIICSSGSDRRAIIWDLTQIG 351
>sp|Q54WA3|PEX7_DICDI Peroxisomal targeting signal 2 receptor OS=Dictyostelium discoideum
GN=pex7 PE=3 SV=1
Length = 316
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 6/189 (3%)
Query: 40 EYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAWG--GVG 97
E+ + S DWN T S D + IW+ + H +Y W
Sbjct: 102 EHTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPRMDRSLKTFREHRYCIYSAIWSPRNAH 161
Query: 98 VFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVV 157
+FASVS D +++++D RD I D ++ WNK + + + T +D + +
Sbjct: 162 LFASVSGDRTLKIWDSRDNRSLNTI---KAHDHEILTCDWNKYNDKEVVTGSVDKT-IRI 217
Query: 158 LDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDP 217
DIR+P P L+ H +V I +PHS + + D ++WD + P+ +D
Sbjct: 218 WDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRAREQDPIIARMDH 277
Query: 218 ILAYTAGAE 226
+ G +
Sbjct: 278 HTEFVVGLD 286
>sp|Q9XF57|PEX7_ARATH Peroxisome biogenesis protein 7 OS=Arabidopsis thaliana GN=PEX7
PE=1 SV=2
Length = 317
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
Query: 40 EYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAWGGVG-- 97
E+ + S D+N TSS D T +W ++R A H VY W
Sbjct: 104 EHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGD 163
Query: 98 VFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVV 157
VFAS S D ++R++D+R+ + II D ++ WNK D +AT +D V V
Sbjct: 164 VFASASGDCTLRIWDVREPGSTMII---PAHDFEILSCDWNKYDDCILATSSVDKT-VKV 219
Query: 158 LDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
D+R +P+ L H +V + ++PH I + D +WD
Sbjct: 220 WDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
>sp|Q61Y48|LIN53_CAEBR Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae
GN=lin-53 PE=3 SV=2
Length = 416
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 122/276 (44%), Gaps = 38/276 (13%)
Query: 3 QKPDLLATSS--------DFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAE 54
QKP ++AT S D+ + + ++ L L G+ Y WN +
Sbjct: 131 QKPTIIATKSPSADVYIFDYTKYPSVPKDNTFNPLLKL-KGHTKEGY-----GLSWNPNK 184
Query: 55 PRRIGTSSIDTTCTIWDIEREA-VDTQLIA------HDKEVYDIAWGGV--GVFASVSAD 105
I ++S D T WDI A + +L A H+ V D+AW + GVF SV D
Sbjct: 185 EGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGVFGSVGDD 244
Query: 106 GSVRVFDLR-DKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPT 164
+ ++DLR + I S+E + L +N +AT D V + D+R
Sbjct: 245 KKLLIWDLRTNVPGHAIDAHSAEVNC----LAFNPYSEFILATGSADKT-VALWDLRNLR 299
Query: 165 LPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMG--QPVEGGLD--PILA 220
L + + H+ + + W+PH+ + ++G D + +WDLS +G Q E D P L
Sbjct: 300 LKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPELL 359
Query: 221 YTAG---AEIEQLQWSSSQPDWVAIAFSTKLQILRV 253
+ G A+I W+ ++P WV + S IL+V
Sbjct: 360 FIHGGHTAKISDFSWNPNEP-WVVCSVSED-NILQV 393
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 69/164 (42%), Gaps = 20/164 (12%)
Query: 58 IGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRD 115
G+ D IWD+ + AH EV +A+ F A+ SAD +V ++DLR+
Sbjct: 238 FGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRN 297
Query: 116 KEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF------------- 162
+ES + + ++ W+ + +A+ D ++ V D+
Sbjct: 298 LRLKLHSFESHRDE--IFQVQWSPHNETILASSGTDK-RLHVWDLSKIGEDQTAEDAEDG 354
Query: 163 -PTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
P L + H A ++ +W P+ +C+ +D+ +W ++
Sbjct: 355 PPELLFIH-GGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMA 397
>sp|Q9P783|RRB1_SCHPO Ribosome assembly protein rrb1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rrb1 PE=1 SV=1
Length = 480
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 20/192 (10%)
Query: 81 LIAHDKEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWN 138
++H V D+ W VF+S S DG+ R++D+R+K+ ++ + ++ P + L WN
Sbjct: 287 FLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWN 346
Query: 139 KQDPRYMATIIMDSAKVVVLDIR------FPTLPVVELQRHQASVNAIAWAPHSSCHICT 192
+ P +AT D+ V D+R PV + H+A + +I W P+ I
Sbjct: 347 TRVPNLLAT-GADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSVIGV 405
Query: 193 AGDDSQALIWDLS-------SMGQPVEGGLD--PILAY--TAGAEIEQLQWSSSQPDWVA 241
G D+Q +WDLS + EG D P L + EI+++ W P +
Sbjct: 406 VGADNQISLWDLSVELDEEEQDSRAAEGLQDVPPQLMFIHMGQQEIKEMHWHRQIPGTIV 465
Query: 242 IAFSTKLQILRV 253
T + + +
Sbjct: 466 STAMTGINVFKT 477
>sp|Q1JQD2|GRWD1_BOVIN Glutamate-rich WD repeat-containing protein 1 OS=Bos taurus
GN=GRWD1 PE=2 SV=1
Length = 446
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 38/269 (14%)
Query: 5 PDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSID 64
P LAT FLR DE R++ +G+ + + DW+ P R+ T
Sbjct: 190 PQALAT---FLR-----DEQTRMKPIFAFSGHMGEGF-----ALDWSPRVPGRLLTGDCQ 236
Query: 65 TTCTIW---DIEREAVDTQ-LIAHDKEVYDIAWGGV--GVFASVSADGSVRVFDLRDK-E 117
+W D VD + + H + V D+ W VFAS SAD S+R++D+R
Sbjct: 237 KNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPS 296
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIR-FPT-LPVVELQRHQA 175
+ ++ ++ D + + W+ ++P ++ D + V D+R F + PV ++H A
Sbjct: 297 KACMLTTATAHDGDVNVINWSHREPFLLSG--GDDGALKVWDLRQFKSGSPVATFKQHVA 354
Query: 176 SVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGG--LDPILA---------YTAG 224
V ++ W P S +G D+Q WDL+ P G DP LA +
Sbjct: 355 PVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPEAGDAETDPGLADLPQQLLFVHQGE 414
Query: 225 AEIEQLQWSSSQPDWVAIAFSTKLQILRV 253
++++L W P + ST L V
Sbjct: 415 TDLKELHW---HPQCPGVLVSTALSGFTV 440
>sp|Q810D6|GRWD1_MOUSE Glutamate-rich WD repeat-containing protein 1 OS=Mus musculus
GN=Grwd1 PE=2 SV=2
Length = 446
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 108/254 (42%), Gaps = 30/254 (11%)
Query: 20 ISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREA--- 76
+ DE R++ G+ + + DW+ P R+ T +W
Sbjct: 197 LRDEQARIKPIFSFAGHMGEGF-----ALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWN 251
Query: 77 VDTQ-LIAHDKEVYDIAWGGV--GVFASVSADGSVRVFDLRDKE-HSTIIYESSEPDTPL 132
VD + + H + V D+ W VFAS SAD S+R++D+R + ++ ++ D +
Sbjct: 252 VDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDV 311
Query: 133 VRLGWNKQDPRYMATIIMDSAKVVVLDIR-FPT-LPVVELQRHQASVNAIAWAPHSSCHI 190
+ W++++P ++ D + V D+R F + PV ++H A V ++ W P S
Sbjct: 312 NVISWSRREPFLLSG--GDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVF 369
Query: 191 CTAGDDSQALIWDLSSMGQPVEG--GLDPILA---------YTAGAEIEQLQWSSSQPDW 239
+G D+Q WDL+ P G DP LA + ++++L W P
Sbjct: 370 AASGADNQITQWDLAVERDPESGETETDPGLAALPQQLLFVHQGETDLKELHW---HPQC 426
Query: 240 VAIAFSTKLQILRV 253
+ ST L V
Sbjct: 427 PGVLISTALSGFTV 440
>sp|O22469|MSI3_ARATH WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana
GN=MSI3 PE=1 SV=2
Length = 424
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 50 WNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLI------AHDKEVYDIAW--GGVGVFAS 101
W+ + + + S D +WD+ A D L H + D+AW +F S
Sbjct: 177 WSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGS 236
Query: 102 VSADGSVRVFDLRDKE--HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 159
D + ++DLR + H ++E + L +N + +AT DS V + D
Sbjct: 237 AGDDCQLVIWDLRTNQMQHQVKVHERE-----INYLSFNPFNEWVLATASSDST-VALFD 290
Query: 160 IRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMG-QPVEGGLD-- 216
+R T P+ L +H+ V + W P+ + ++G+D + ++WD++ +G + +E LD
Sbjct: 291 LRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAE 350
Query: 217 ---PILAYTAG---AEIEQLQWSSSQPDWV--AIAFSTKLQI 250
P L ++ G A+I W+ +P WV ++A LQ+
Sbjct: 351 DGPPELLFSHGGHKAKISDFAWNKDEP-WVISSVAEDNSLQV 391
Score = 39.3 bits (90), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 72/171 (42%), Gaps = 16/171 (9%)
Query: 50 WNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAWGGVG--VFASVSADGS 107
W+ G++ D IWD+ + Q+ H++E+ +++ V A+ S+D +
Sbjct: 226 WHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDST 285
Query: 108 VRVFDLRD--------KEHSTIIYESS-EPDTPLVRLGWNKQDPRYMA---TIIMDSAKV 155
V +FDLR +H +++ +P+ V L + +D R M + D
Sbjct: 286 VALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETV-LASSGEDRRLMVWDINRVGDEQLE 344
Query: 156 VVLDIR-FPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
+ LD P + H+A ++ AW I + +D+ +W ++
Sbjct: 345 IELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMA 395
>sp|Q6P315|RBBP7_XENTR Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2
SV=1
Length = 425
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + I H
Sbjct: 172 LRGHQKEGY-----GLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHS 226
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D+AW + +F SV+ D + ++D R S + + L +N
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF 286
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 287 ILATGSADKT-VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 204 LSSMG--QPVEGGLD--PILAYTAG---AEIEQLQWSSSQPDWVAIAFS 245
LS +G Q E D P L + G A+I W+ ++P WV + S
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 393
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 28/159 (17%)
Query: 85 DKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY 144
D YD G G F SVS + I +E + R + Q+P
Sbjct: 93 DASHYDSEKGEFGGFGSVSGKIETEI---------KINHEGE-----VNRARYMPQNPCI 138
Query: 145 MATIIMDSAKVVVLD-IRFPTLPV--------VELQRHQASVNAIAWAPHSSCHICTAGD 195
+AT SA V+V D + P+ P + L+ HQ ++W + S H+ +A D
Sbjct: 139 IATKT-PSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASD 197
Query: 196 DSQALIWDLSSMGQPVEGGLDPILAYTAG--AEIEQLQW 232
D +WD+S+ P EG + A G A +E + W
Sbjct: 198 DHTVCLWDISA--GPKEGKVVDAKAIFTGHSAVVEDVAW 234
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 93/222 (41%), Gaps = 32/222 (14%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W IS E + V+ K++ G + + W+ G+ +
Sbjct: 192 LLSASDDHTVCLWDISAGPKEGKVVDAKAIFTG-----HSAVVEDVAWHLLHESLFGSVA 246
Query: 63 IDTTCTIWDIEREAVDT---QLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D IWD + AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + + + ++ W+ + +A+ D ++ V D+ P
Sbjct: 307 LKLHSFESHKDE--IFQVHWSPHNETILASSGTDR-RLNVWDLSKIGEEQSAEDAEDGPP 363
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
L + H A ++ +W P+ IC+ +D+ IW ++
Sbjct: 364 ELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
>sp|Q5XI13|GRWD1_RAT Glutamate-rich WD repeat-containing protein 1 OS=Rattus norvegicus
GN=Grwd1 PE=2 SV=1
Length = 445
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 30/254 (11%)
Query: 20 ISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIW---DIEREA 76
+ DE RV+ G+ + + DW+ P R+ T +W D
Sbjct: 196 LRDEQARVKPIFSFAGHMGEGF-----ALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWN 250
Query: 77 VDTQ-LIAHDKEVYDIAWGGV--GVFASVSADGSVRVFDLRDKE-HSTIIYESSEPDTPL 132
VD + + H + V D+ W VFAS SAD S+R++D+R + ++ ++ D +
Sbjct: 251 VDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDV 310
Query: 133 VRLGWNKQDPRYMATIIMDSAKVVVLDIR-FPT-LPVVELQRHQASVNAIAWAPHSSCHI 190
+ W++++P ++ D + V D+R F + PV ++H A V ++ W P S
Sbjct: 311 NVISWSRREPFLLSG--GDDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVF 368
Query: 191 CTAGDDSQALIWDLSSMGQPVEG--GLDPILA---------YTAGAEIEQLQWSSSQPDW 239
+G D+Q WDL+ P G DP LA + ++++L W P
Sbjct: 369 AASGADNQITQWDLAVERDPESGETETDPGLAALPQQLLFVHQGETDLKELHW---HPQC 425
Query: 240 VAIAFSTKLQILRV 253
+ ST L V
Sbjct: 426 PGVLISTALSGFTV 439
>sp|Q9I8G9|RBBP7_CHICK Histone-binding protein RBBP7 OS=Gallus gallus GN=RBBP7 PE=1 SV=1
Length = 424
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + I H
Sbjct: 171 LRGHQKEGY-----GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHS 225
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D+AW + +F SV+ D + ++D R S + + L +N
Sbjct: 226 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF 285
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 286 ILATGSADKT-VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
Query: 204 LSSMG--QPVEGGLD--PILAYTAG---AEIEQLQWSSSQPDWVAIAFS 245
LS +G Q E D P L + G A+I W+ ++P WV + S
Sbjct: 345 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 392
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 28/159 (17%)
Query: 85 DKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY 144
D YD G G F SV+ + I +E + R + Q+P
Sbjct: 92 DTSQYDSEKGEFGGFGSVTGKIETEI---------KINHEGE-----VNRARYMPQNPYI 137
Query: 145 MATIIMDSAKVVVLD-IRFPTLPV--------VELQRHQASVNAIAWAPHSSCHICTAGD 195
+AT SA V+V D + P+ P + L+ HQ ++W + H+ +A D
Sbjct: 138 IATKT-PSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASD 196
Query: 196 DSQALIWDLSSMGQPVEGGLDPILAYTAG--AEIEQLQW 232
D +WD+S+ P EG + A G A +E + W
Sbjct: 197 DHTVCLWDISA--GPKEGKIVDAKAIFTGHSAVVEDVAW 233
Score = 35.4 bits (80), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 32/225 (14%)
Query: 4 KPDLLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIG 59
K LL+ S D + +W IS E + V+ K++ G + + W+ G
Sbjct: 188 KGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTG-----HSAVVEDVAWHLLHESLFG 242
Query: 60 TSSIDTTCTIWDIEREAVDT---QLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLR 114
+ + D IWD + AH EV +++ F A+ SAD +V ++DLR
Sbjct: 243 SVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 302
Query: 115 DKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF------------ 162
+ + +ES + + + ++ W+ + +A+ D ++ V D+
Sbjct: 303 NLKLKLHSFESHKDE--IFQVHWSPHNETILASSGTDR-RLNVWDLSKIGEEQSAEDAED 359
Query: 163 --PTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
P L + H A ++ +W P+ IC+ +D+ IW ++
Sbjct: 360 GPPELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
>sp|Q8AVH1|RBBP7_XENLA Histone-binding protein RBBP7 OS=Xenopus laevis GN=rbbp7 PE=2 SV=1
Length = 425
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + + H
Sbjct: 172 LRGHQKEGY-----GLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHS 226
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D+AW + +F SV+ D + ++D R S + + L +N
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF 286
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 287 ILATGSADKT-VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 204 LSSMG--QPVEGGLD--PILAYTAG---AEIEQLQWSSSQPDWVAIAFS 245
LS +G Q E D P L + G A+I W+ ++P WV + S
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 393
Score = 37.4 bits (85), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 28/159 (17%)
Query: 85 DKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY 144
D YD G G F SVS + I +E + R + Q+P
Sbjct: 93 DASHYDSEKGEFGGFGSVSGKIETEI---------KINHEGE-----VNRARYMPQNPCI 138
Query: 145 MATIIMDSAKVVVLD-IRFPTLPV--------VELQRHQASVNAIAWAPHSSCHICTAGD 195
+AT SA V+V D + P+ P + L+ HQ ++W + S H+ +A D
Sbjct: 139 IATKT-PSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNSNLSGHLLSASD 197
Query: 196 DSQALIWDLSSMGQPVEGGLDPILAYTAG--AEIEQLQW 232
D +WD+S+ P EG + A G A +E + W
Sbjct: 198 DHTVCLWDISA--GPKEGKVVDAKAVFTGHSAVVEDVAW 234
Score = 34.7 bits (78), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 93/222 (41%), Gaps = 32/222 (14%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W IS E + V+ K++ G + + W+ G+ +
Sbjct: 192 LLSASDDHTVCLWDISAGPKEGKVVDAKAVFTG-----HSAVVEDVAWHLLHESLFGSVA 246
Query: 63 IDTTCTIWDIEREAVDT---QLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D IWD + AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + + + ++ W+ + +A+ D ++ V D+ P
Sbjct: 307 LKLHSFESHKDE--IFQVHWSPHNETILASSGTDR-RLNVWDLSKIGEEQSAEDAEDGPP 363
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
L + H A ++ +W P+ IC+ +D+ IW ++
Sbjct: 364 ELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
>sp|Q24572|CAF1_DROME Probable histone-binding protein Caf1 OS=Drosophila melanogaster
GN=Caf1 PE=1 SV=1
Length = 430
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 18/212 (8%)
Query: 50 WNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHDKEVYDIAWGGV--GVFA 100
WN + ++S D T +WDI E +D + I H V D+AW + +F
Sbjct: 189 WNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFG 248
Query: 101 SVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDI 160
SV+ D + ++D R+ S + + L +N +AT D V + D+
Sbjct: 249 SVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 307
Query: 161 RFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMG--QPVEGGLD-- 216
R L + + H+ + + W+PH+ + ++G D + +WDLS +G Q E D
Sbjct: 308 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 367
Query: 217 PILAYTAG---AEIEQLQWSSSQPDWVAIAFS 245
P L + G A+I W+ ++P W+ + S
Sbjct: 368 PELLFIHGGHTAKISDFSWNPNEP-WIICSVS 398
Score = 34.3 bits (77), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 93/222 (41%), Gaps = 32/222 (14%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W I+ E R ++ K++ G + + W+ G+ +
Sbjct: 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTG-----HTAVVEDVAWHLLHESLFGSVA 251
Query: 63 IDTTCTIWDIEREAVDT---QLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D IWD + AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 252 DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 311
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + + + ++ W+ + +A+ D ++ V D+ P
Sbjct: 312 LKLHSFESHKDE--IFQVQWSPHNETILASSGTDR-RLHVWDLSKIGEEQSTEDAEDGPP 368
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
L + H A ++ +W P+ IC+ +D+ +W ++
Sbjct: 369 ELLFIH-GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409
>sp|P90916|LIN53_CAEEL Probable histone-binding protein lin-53 OS=Caenorhabditis elegans
GN=lin-53 PE=1 SV=2
Length = 417
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 50 WNEAEPRRIGTSSIDTTCTIWDI--------EREAVDTQLIAHDKEVYDIAWGGV--GVF 99
WN + I ++S D T WDI E +A D H+ V D+AW + GVF
Sbjct: 180 WNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDV-FKGHESVVEDVAWHVLHDGVF 238
Query: 100 ASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 159
SV D + ++D+R I S + L +N +AT D V + D
Sbjct: 239 GSVGDDKKLLIWDVRTSTPGHCIDAHS---AEVNCLAFNPYSEFILATGSADKT-VALWD 294
Query: 160 IRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMG--QPVEGGLD- 216
+R + + + H+ + + W+PH+ + ++G D + +WDLS +G Q E D
Sbjct: 295 LRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDG 354
Query: 217 -PILAYTAG---AEIEQLQWSSSQPDWVAIAFSTKLQILRV 253
P L + G A+I W+ ++P WV + S IL+V
Sbjct: 355 PPELLFIHGGHTAKISDFSWNPNEP-WVVCSVSED-NILQV 393
Score = 34.3 bits (77), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 69/164 (42%), Gaps = 20/164 (12%)
Query: 58 IGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRD 115
G+ D IWD+ + AH EV +A+ F A+ SAD +V ++DLR+
Sbjct: 238 FGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRN 297
Query: 116 KEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF------------- 162
+ES + + ++ W+ + +A+ D ++ V D+
Sbjct: 298 LRMKLHSFESHRDE--IFQVQWSPHNETILASSGTDK-RLHVWDLSKIGEDQSAEDAEDG 354
Query: 163 -PTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
P L + H A ++ +W P+ +C+ +D+ +W ++
Sbjct: 355 PPELLFIH-GGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMA 397
>sp|Q9BQ67|GRWD1_HUMAN Glutamate-rich WD repeat-containing protein 1 OS=Homo sapiens
GN=GRWD1 PE=1 SV=1
Length = 446
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 35/271 (12%)
Query: 3 QKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
++P LA FLR D + ++K + + + + G + DW+ R+ T
Sbjct: 188 EEPQALAA---FLR-------DEQAQMKPIFS---FAGHMGEGFALDWSPRVTGRLLTGD 234
Query: 63 IDTTCTIW---DIEREAVDTQ-LIAHDKEVYDIAWGGV--GVFASVSADGSVRVFDLRDK 116
+W D VD + + H + V D+ W VFAS SAD S+R++D+R
Sbjct: 235 CQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAA 294
Query: 117 -EHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIR-FPT-LPVVELQRH 173
+ ++ ++ D + + W++++P ++ D + + D+R F + PV ++H
Sbjct: 295 PSKACMLTTATAHDGDVNVISWSRREPFLLSG--GDDGALKIWDLRQFKSGSPVATFKQH 352
Query: 174 QASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGL--DPILA---------YT 222
A V ++ W P S +G D Q WDL+ P G + DP LA +
Sbjct: 353 VAPVTSVEWHPQDSGVFAASGADHQITQWDLAVERDPEAGDVEADPGLADLPQQLLFVHQ 412
Query: 223 AGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 253
E+++L W P + + I R
Sbjct: 413 GETELKELHWHPQCPGLLVSTALSGFTIFRT 443
>sp|O14021|PRW1_SCHPO RbAp48-related WD40 repeat-containing protein prw1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prw1 PE=1 SV=1
Length = 431
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 39 SEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIER-------EAVDTQLIAHDKEVYDI 91
+++ P TS WN + + S D T + WD+ + + +H+K+V D+
Sbjct: 181 TKHTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDV 240
Query: 92 --AWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDT-PLVRLGWNKQDPRYMATI 148
+ + ASVS D + V D+R + ST S + P+ + +N + +AT
Sbjct: 241 RFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATC 300
Query: 149 IMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMG 208
D + + D+R + L+ H+ V I+++PH + + D + L+WDLS +G
Sbjct: 301 STDKT-IALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIG 359
Query: 209 --QPVEGGLD--PILAYTAGAE 226
QP E D P L + G
Sbjct: 360 EDQPAEEAQDGPPELLFMHGGH 381
>sp|Q71UF4|RBBP7_RAT Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2
SV=1
Length = 425
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + I H
Sbjct: 172 LRGHQKEGY-----GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D+AW + +F SV+ D + ++D R S + + L +N
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 287 ILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 204 LSSMG--QPVEGGLD--PILAYTAG---AEIEQLQWSSSQPDWVAIAFS 245
LS +G Q E D P L + G A+I W+ ++P WV + S
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 393
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W I+ E + V+ K++ G + + W+ G+ +
Sbjct: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-----HSAVVEDVAWHLLHESLFGSVA 246
Query: 63 IDTTCTIWDIEREAVD--TQLI-AHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D IWD + L+ AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + + + ++ W+ + +A+ D ++ V D+ P
Sbjct: 307 LKLHTFESHKDE--IFQVHWSPHNETILASSGTDR-RLNVWDLSKIGEEQSAEDAEDGPP 363
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
L + H A ++ +W P+ IC+ +D+ IW ++
Sbjct: 364 ELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 134 RLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPV--------VELQRHQASVNAIAWAPH 185
R + Q+P +AT S +V + P P + L+ HQ ++W +
Sbjct: 128 RARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSN 187
Query: 186 SSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAG--AEIEQLQW 232
S H+ +A DD +WD+++ P EG + A G A +E + W
Sbjct: 188 LSGHLLSASDDHTVCLWDINA--GPKEGKIVDAKAIFTGHSAVVEDVAW 234
>sp|Q4R304|RBBP7_MACFA Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2
SV=1
Length = 425
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + I H
Sbjct: 172 LRGHQKEGY-----GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D+AW + +F SV+ D + ++D R S + + L +N
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 287 ILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 204 LSSMG--QPVEGGLD--PILAYTAG---AEIEQLQWSSSQPDWVAIAFS 245
LS +G Q E D P L + G A+I W+ ++P WV + S
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 393
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W I+ E + V+ K++ G + + W+ G+ +
Sbjct: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-----HSAVVEDVAWHLLHESLFGSVA 246
Query: 63 IDTTCTIWDIEREAVD--TQLI-AHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D IWD + L+ AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + + + ++ W+ + +A+ D ++ V D+ P
Sbjct: 307 LKLHTFESHKDE--IFQVHWSPHNETILASSGTDR-RLNVWDLSKIGEEQSAEDAEDGPP 363
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
L + H A ++ +W P+ IC+ +D+ IW ++
Sbjct: 364 ELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 134 RLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPV--------VELQRHQASVNAIAWAPH 185
R + Q+P +AT S +V + P P + L+ HQ ++W +
Sbjct: 128 RARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSN 187
Query: 186 SSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAG--AEIEQLQW 232
S H+ +A DD +WD+++ P EG + A G A +E + W
Sbjct: 188 LSGHLLSASDDHTVCLWDINA--GPKEGKIVDAKAIFTGHSAVVEDVAW 234
>sp|Q16576|RBBP7_HUMAN Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1
Length = 425
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + I H
Sbjct: 172 LRGHQKEGY-----GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D+AW + +F SV+ D + ++D R S + + L +N
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 287 ILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 204 LSSMG--QPVEGGLD--PILAYTAG---AEIEQLQWSSSQPDWVAIAFS 245
LS +G Q E D P L + G A+I W+ ++P WV + S
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 393
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W I+ E + V+ K++ G + + W+ G+ +
Sbjct: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-----HSAVVEDVAWHLLHESLFGSVA 246
Query: 63 IDTTCTIWDIEREAVD--TQLI-AHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D IWD + L+ AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + + + ++ W+ + +A+ D ++ V D+ P
Sbjct: 307 LKLHTFESHKDE--IFQVHWSPHNETILASSGTDR-RLNVWDLSKIGEEQSAEDAEDGPP 363
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
L + H A ++ +W P+ IC+ +D+ IW ++
Sbjct: 364 ELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 134 RLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPV--------VELQRHQASVNAIAWAPH 185
R + Q+P +AT S +V + P P + L+ HQ ++W +
Sbjct: 128 RARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSN 187
Query: 186 SSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAG--AEIEQLQW 232
S H+ +A DD +WD+++ P EG + A G A +E + W
Sbjct: 188 LSGHLLSASDDHTVCLWDINA--GPKEGKIVDAKAIFTGHSAVVEDVAW 234
>sp|Q3SWX8|RBBP7_BOVIN Histone-binding protein RBBP7 OS=Bos taurus GN=RBBP7 PE=2 SV=1
Length = 425
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + I H
Sbjct: 172 LRGHQKEGY-----GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D+AW + +F SV+ D + ++D R S + + L +N
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 287 ILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 204 LSSMG--QPVEGGLD--PILAYTAG---AEIEQLQWSSSQPDWVAIAFS 245
LS +G Q E D P L + G A+I W+ ++P WV + S
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 393
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W I+ E + V+ K++ G + + W+ G+ +
Sbjct: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-----HSAVVEDVAWHLLHESLFGSVA 246
Query: 63 IDTTCTIWDIEREAVD--TQLI-AHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D IWD + L+ AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + + + ++ W+ + +A+ D ++ V D+ P
Sbjct: 307 LKLHTFESHKDE--IFQVHWSPHNETILASSGTDR-RLNVWDLSKIGEEQSAEDAEDGPP 363
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
L + H A ++ +W P+ IC+ +D+ IW ++
Sbjct: 364 ELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 35.0 bits (79), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 134 RLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPV--------VELQRHQASVNAIAWAPH 185
R + Q+P +AT S +V + P P + L+ HQ ++W +
Sbjct: 128 RARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSN 187
Query: 186 SSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAG--AEIEQLQW 232
S H+ +A DD +WD+++ P EG + A G A +E + W
Sbjct: 188 LSGHLLSASDDHTVCLWDINA--GPKEGKIVDAKAIFTGHSAVVEDVAW 234
>sp|Q60973|RBBP7_MOUSE Histone-binding protein RBBP7 OS=Mus musculus GN=Rbbp7 PE=1 SV=1
Length = 425
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + I H
Sbjct: 172 LRGHQKEGY-----GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D+AW + +F SV+ D + ++D R S + + L +N
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 287 ILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Query: 204 LSSMG--QPVEGGLD--PILAYTAG---AEIEQLQWSSSQPDWVAIAFS 245
LS +G Q E D P L + G A+I W+ ++P WV + S
Sbjct: 346 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 393
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W I+ E + V+ K++ G + + W+ G+ +
Sbjct: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG-----HSAVVEDVAWHLLHESLFGSVA 246
Query: 63 IDTTCTIWDIEREAVD--TQLI-AHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D IWD + L+ AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + + + ++ W+ + +A+ D ++ V D+ P
Sbjct: 307 LKLHTFESHKDE--IFQVHWSPHNETILASSGTDR-RLNVWDLSKIGEEQSAEDAEDGPP 363
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
L + H A ++ +W P+ IC+ +D+ IW ++
Sbjct: 364 ELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 34.7 bits (78), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 134 RLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPV--------VELQRHQASVNAIAWAPH 185
R + Q+P +AT S +V + P P + L+ HQ ++W +
Sbjct: 128 RARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSN 187
Query: 186 SSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAG--AEIEQLQW 232
S H+ +A DD +WD+++ P EG + A G A +E + W
Sbjct: 188 LSGHLLSASDDHTVCLWDINA--GPKEGKIVDAKAIFTGHSAVVEDVAW 234
>sp|O22468|MSI2_ARATH WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana
GN=MSI2 PE=2 SV=1
Length = 415
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 28/225 (12%)
Query: 50 WNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIA------HDKEVYDIAW--GGVGVFAS 101
W+ + + + S D +WD+ D L A H+ + D++W +F S
Sbjct: 176 WSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGS 235
Query: 102 VSADGSVRVFDLRDKE--HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLD 159
DG + ++D R + H ++E + L +N + +AT DS V + D
Sbjct: 236 AGEDGRLVIWDTRTNQMQHQVKVHERE-----VNYLSFNPFNEWVLATASSDST-VALFD 289
Query: 160 IRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQP-VEGGLD-- 216
+R P+ + H+ V + W P+ + ++G+D + ++WDL+ +G+ +E LD
Sbjct: 290 LRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAE 349
Query: 217 ---PILAYTAG---AEIEQLQWSSSQPDWV--AIAFSTKLQILRV 253
P L ++ G A+I W+ ++P WV ++A LQ+ ++
Sbjct: 350 DGPPELLFSHGGHKAKISDFAWNKNEP-WVIASVAEDNSLQVWQM 393
>sp|Q6INH0|RBP4B_XENLA Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-b PE=1
SV=3
Length = 425
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 18/212 (8%)
Query: 50 WNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHDKEVYDIAWGGV--GVFA 100
WN + ++S D T +WDI E + VD + I H V D++W + +F
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 101 SVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDI 160
SV+ D + ++D R S + + L +N +AT D V + D+
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 303
Query: 161 RFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQP-----VEGGL 215
R L + + H+ + + W+PH+ + ++G D + +WDLS +G+ E G
Sbjct: 304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP 363
Query: 216 DPILAYTAG--AEIEQLQWSSSQPDWVAIAFS 245
+L G A+I W+ ++P WV + S
Sbjct: 364 PELLFIHGGHTAKISDFSWNPNEP-WVICSVS 394
Score = 37.7 bits (86), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 100/238 (42%), Gaps = 35/238 (14%)
Query: 6 DLLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTS 61
+LL+ S D + +W IS E + V+ K++ G + + W+ G+
Sbjct: 192 NLLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-----HTAVVEDVSWHLLHESLFGSV 246
Query: 62 SIDTTCTIWDIEREAVDT---QLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDK 116
+ D IWD + AH EV +++ F A+ SAD +V ++DLR+
Sbjct: 247 ADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Query: 117 EHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF-------------- 162
+ +ES + + + ++ W+ + +A+ D ++ V D+
Sbjct: 307 KLKLHSFESHKDE--IFQVQWSPHNETILASSGTDR-RLNVWDLSKIGEEQSPEDAEDGP 363
Query: 163 PTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSS---MGQPVEGGLDP 217
P L + H A ++ +W P+ IC+ +D+ +W ++ + EG +DP
Sbjct: 364 PELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDTEGSVDP 420
Score = 37.4 bits (85), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 85 DKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY 144
D YD G G F SVS + + I +E + R + Q+P
Sbjct: 94 DASHYDSEKGEFGGFGSVSGKIEIEI---------KINHEGE-----VNRARYMPQNPCI 139
Query: 145 MATIIMDSAKVVVLD-IRFPTLPV--------VELQRHQASVNAIAWAPHSSCHICTAGD 195
+AT S V+V D + P+ P + L+ HQ ++W P+ S ++ +A D
Sbjct: 140 IATKTP-SCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASD 198
Query: 196 DSQALIWDLSSMGQPVEGG-LDPILAYTAG-AEIEQLQW 232
D +WD+S++ P EG +D +T A +E + W
Sbjct: 199 DHTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSW 235
>sp|Q7ZTY4|RBBP7_DANRE Histone-binding protein RBBP7 OS=Danio rerio GN=rbbp7 PE=2 SV=1
Length = 426
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + I H
Sbjct: 173 LRGHQKEGY-----GLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHT 227
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D++W + +F SV+ D + ++D R S + + L +N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 288 ILATGSADKT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 204 LSSMG--QPVEGGLD--PILAYTAG---AEIEQLQWSSSQPDWVAIAFS 245
LS +G Q E D P L + G A+I W+ ++P WV + S
Sbjct: 347 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 394
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 166 PVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGL-DPILAYTAG 224
P + L+ HQ ++W P+ S ++ +A DD +WD+S G P EG + D +T
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDIS--GAPKEGKIVDAKTIFTGH 226
Query: 225 -AEIEQLQW 232
A +E + W
Sbjct: 227 TAVVEDVSW 235
Score = 35.0 bits (79), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 94/223 (42%), Gaps = 32/223 (14%)
Query: 6 DLLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTS 61
+LL+ S D + +W IS E + V+ K++ G + + W+ G+
Sbjct: 192 NLLSASDDHTICLWDISGAPKEGKIVDAKTIFTG-----HTAVVEDVSWHLLHESLFGSV 246
Query: 62 SIDTTCTIWDIEREAVDT---QLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDK 116
+ D IWD + AH EV +++ F A+ SAD +V ++DLR+
Sbjct: 247 ADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Query: 117 EHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF-------------- 162
+ +ES + + + ++ W+ + +A+ D ++ V D+
Sbjct: 307 KLKLHSFESHKDE--IFQVQWSPHNETILASSGTDR-RLNVWDLSKIGEEQSAEDAEDGP 363
Query: 163 PTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
P L + H A ++ +W P+ IC+ +D+ +W ++
Sbjct: 364 PELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
>sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=5
Length = 425
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + I H
Sbjct: 173 LRGHQKEGY-----GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D++W + +F SV+ D + ++D R S + + L +N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 288 ILATGSADKT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 204 LSSMGQP-----VEGGLDPILAYTAG--AEIEQLQWSSSQPDWVAIAFS 245
LS +G+ E G +L G A+I W+ ++P WV + S
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 394
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 26/158 (16%)
Query: 85 DKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY 144
D YD G G F SVS + + I +E + R + Q+P
Sbjct: 94 DASHYDSEKGEFGGFGSVSGKIEIEI---------KINHEGE-----VNRARYMPQNPCI 139
Query: 145 MATIIMDSAKVVVLDIRFPTLPV--------VELQRHQASVNAIAWAPHSSCHICTAGDD 196
+AT S +V + P+ P + L+ HQ ++W P+ S H+ +A DD
Sbjct: 140 IATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDD 199
Query: 197 SQALIWDLSSMGQPVEGG-LDPILAYTAG-AEIEQLQW 232
+WD+S++ P EG +D +T A +E + W
Sbjct: 200 HTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSW 235
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 35/237 (14%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W IS E + V+ K++ G + + W+ G+ +
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-----HTAVVEDVSWHLLHESLFGSVA 247
Query: 63 IDTTCTIWDIEREAVDT---QLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D IWD + AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 307
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + + + ++ W+ + +A+ D ++ V D+ P
Sbjct: 308 LKLHSFESHKDE--IFQVQWSPHNETILASSGTDR-RLNVWDLSKIGEEQSPEDAEDGPP 364
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSS---MGQPVEGGLDP 217
L + H A ++ +W P+ IC+ +D+ +W ++ + EG +DP
Sbjct: 365 ELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 420
>sp|Q09028|RBBP4_HUMAN Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3
Length = 425
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + I H
Sbjct: 173 LRGHQKEGY-----GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D++W + +F SV+ D + ++D R S + + L +N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 288 ILATGSADKT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 204 LSSMGQP-----VEGGLDPILAYTAG--AEIEQLQWSSSQPDWVAIAFS 245
LS +G+ E G +L G A+I W+ ++P WV + S
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 394
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 26/158 (16%)
Query: 85 DKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY 144
D YD G G F SVS + + I +E + R + Q+P
Sbjct: 94 DASHYDSEKGEFGGFGSVSGKIEIEI---------KINHEGE-----VNRARYMPQNPCI 139
Query: 145 MATIIMDSAKVVVLDIRFPTLPV--------VELQRHQASVNAIAWAPHSSCHICTAGDD 196
+AT S +V + P+ P + L+ HQ ++W P+ S H+ +A DD
Sbjct: 140 IATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDD 199
Query: 197 SQALIWDLSSMGQPVEGG-LDPILAYTAG-AEIEQLQW 232
+WD+S++ P EG +D +T A +E + W
Sbjct: 200 HTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSW 235
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 35/237 (14%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W IS E + V+ K++ G + + W+ G+ +
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-----HTAVVEDVSWHLLHESLFGSVA 247
Query: 63 IDTTCTIWDIEREAVDT---QLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D IWD + AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 307
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + + + ++ W+ + +A+ D ++ V D+ P
Sbjct: 308 LKLHSFESHKDE--IFQVQWSPHNETILASSGTDR-RLNVWDLSKIGEEQSPEDAEDGPP 364
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSS---MGQPVEGGLDP 217
L + H A ++ +W P+ IC+ +D+ +W ++ + EG +DP
Sbjct: 365 ELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 420
>sp|Q3MHL3|RBBP4_BOVIN Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + I H
Sbjct: 173 LRGHQKEGY-----GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D++W + +F SV+ D + ++D R S + + L +N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 288 ILATGSADKT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 204 LSSMGQP-----VEGGLDPILAYTAG--AEIEQLQWSSSQPDWVAIAFS 245
LS +G+ E G +L G A+I W+ ++P WV + S
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 394
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 26/158 (16%)
Query: 85 DKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY 144
D YD G G F SVS + + I +E + R + Q+P
Sbjct: 94 DASHYDSEKGEFGGFGSVSGKIEIEI---------KINHEGE-----VNRARYMPQNPCI 139
Query: 145 MATIIMDSAKVVVLDIRFPTLPV--------VELQRHQASVNAIAWAPHSSCHICTAGDD 196
+AT S +V + P+ P + L+ HQ ++W P+ S H+ +A DD
Sbjct: 140 IATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDD 199
Query: 197 SQALIWDLSSMGQPVEGG-LDPILAYTAG-AEIEQLQW 232
+WD+S++ P EG +D +T A +E + W
Sbjct: 200 HTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSW 235
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 35/237 (14%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W IS E + V+ K++ G + + W+ G+ +
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-----HTAVVEDVSWHLLHESLFGSVA 247
Query: 63 IDTTCTIWDIEREAVDT---QLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D IWD + AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 307
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + + + ++ W+ + +A+ D ++ V D+ P
Sbjct: 308 LKLHSFESHKDE--IFQVQWSPHNETILASSGTDR-RLNVWDLSKIGEEQSPEDAEDGPP 364
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSS---MGQPVEGGLDP 217
L + H A ++ +W P+ IC+ +D+ +W ++ + EG +DP
Sbjct: 365 ELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 420
>sp|Q5M7K4|RBBP4_XENTR Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2
SV=3
Length = 425
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 18/212 (8%)
Query: 50 WNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHDKEVYDIAWGGV--GVFA 100
WN + ++S D T +WDI E + VD + I H V D++W + +F
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 101 SVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDI 160
SV+ D + ++D R S + + L +N +AT D V + D+
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 303
Query: 161 RFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQP-----VEGGL 215
R L + + H+ + + W+PH+ + ++G D + +WDLS +G+ E G
Sbjct: 304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP 363
Query: 216 DPILAYTAG--AEIEQLQWSSSQPDWVAIAFS 245
+L G A+I W+ ++P WV + S
Sbjct: 364 PELLFIHGGHTAKISDFSWNPNEP-WVICSVS 394
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 101/238 (42%), Gaps = 35/238 (14%)
Query: 6 DLLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTS 61
+LL+ S D + +W IS E + V+ K++ G + + W+ G+
Sbjct: 192 NLLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-----HTAVVEDVSWHLLHESLFGSV 246
Query: 62 SIDTTCTIWDIEREAVDT---QLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDK 116
+ D IWD + AH EV +++ F A+ SAD +V ++DLR+
Sbjct: 247 ADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Query: 117 EHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF-------------- 162
+ +ES + + + ++ W+ + +A+ D ++ V D+
Sbjct: 307 KLKLHSFESHKDE--IFQVQWSPHNETILASSGTDR-RLNVWDLSKIGEEQSPEDAEDGP 363
Query: 163 PTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSS---MGQPVEGGLDP 217
P L + H A ++ +W P+ IC+ +D+ +W ++ + EGG+DP
Sbjct: 364 PELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDTEGGVDP 420
Score = 38.1 bits (87), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 26/158 (16%)
Query: 85 DKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY 144
D YD G G F SVS + + I +E + R + Q+P
Sbjct: 94 DASHYDSEKGEFGGFGSVSGKIEIEI---------KINHEGE-----VNRARYMPQNPCI 139
Query: 145 MATIIMDSAKVVVLDIRFPTLPV--------VELQRHQASVNAIAWAPHSSCHICTAGDD 196
+AT S +V + P+ P + L+ HQ ++W P+ S ++ +A DD
Sbjct: 140 IATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDD 199
Query: 197 SQALIWDLSSMGQPVEGG-LDPILAYTAG-AEIEQLQW 232
+WD+S++ P EG +D +T A +E + W
Sbjct: 200 HTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSW 235
>sp|Q5RF92|RBBP4_PONAB Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3
Length = 425
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + I H
Sbjct: 173 LRGHQKEGY-----GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D++W + +F SV+ D + ++D R S + + L +N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 288 ILATGSADKT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 204 LSSMGQP-----VEGGLDPILAYTAG--AEIEQLQWSSSQPDWVAIAFS 245
LS +G+ E G +L G A+I W+ ++P WV + S
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 394
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 26/158 (16%)
Query: 85 DKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY 144
D YD G G F SVS + + I +E + R + Q+P
Sbjct: 94 DASHYDSEKGEFGGFGSVSGKIEIEI---------KINHEGE-----VNRARYMPQNPCI 139
Query: 145 MATIIMDSAKVVVLDIRFPTLPV--------VELQRHQASVNAIAWAPHSSCHICTAGDD 196
+AT S +V + P+ P + L+ HQ ++W P+ S H+ +A DD
Sbjct: 140 IATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDD 199
Query: 197 SQALIWDLSSMGQPVEGG-LDPILAYTAG-AEIEQLQW 232
+WD+S++ P EG +D +T A +E + W
Sbjct: 200 HTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSW 235
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 35/237 (14%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W IS E + V+ K++ G + + W+ G+ +
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-----HTAVVEDVSWHLLHESLFGSVA 247
Query: 63 IDTTCTIWDIEREAVDT---QLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D IWD + AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 307
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + + + ++ W+ + +A+ D ++ V D+ P
Sbjct: 308 LKLHSFESHKDE--IFQVQWSPHNETILASSGTDR-RLNVWDLSKIGEEQSPEDAEDGPP 364
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSS---MGQPVEGGLDP 217
L + H A ++ +W P+ IC+ +D+ +W ++ + EG +DP
Sbjct: 365 ELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 420
>sp|Q9W7I5|RBBP4_CHICK Histone-binding protein RBBP4 OS=Gallus gallus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 18/212 (8%)
Query: 50 WNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHDKEVYDIAWGGV--GVFA 100
WN + ++S D T +WDI E + VD + I H V D++W + +F
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 101 SVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDI 160
SV+ D + ++D R S + + L +N +AT D V + D+
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 303
Query: 161 RFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQP-----VEGGL 215
R L + + H+ + + W+PH+ + ++G D + +WDLS +G+ E G
Sbjct: 304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP 363
Query: 216 DPILAYTAG--AEIEQLQWSSSQPDWVAIAFS 245
+L G A+I W+ ++P WV + S
Sbjct: 364 PELLFIHGGHTAKISDFSWNPNEP-WVICSVS 394
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 26/158 (16%)
Query: 85 DKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY 144
D YD G G F SVS + + I +E + R + Q+P
Sbjct: 94 DASHYDSEKGEFGGFGSVSGKIEIEI---------KINHEGE-----VNRARYMPQNPCI 139
Query: 145 MATIIMDSAKVVVLDIRFPTLPV--------VELQRHQASVNAIAWAPHSSCHICTAGDD 196
+AT S +V + P+ P + L+ HQ ++W P+ S H+ +A DD
Sbjct: 140 IATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDD 199
Query: 197 SQALIWDLSSMGQPVEGG-LDPILAYTAG-AEIEQLQW 232
+WD+S++ P EG +D +T A +E + W
Sbjct: 200 HTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSW 235
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 35/237 (14%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W IS E + V+ K++ G + + W+ G+ +
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-----HTAVVEDVSWHLLHESLFGSVA 247
Query: 63 IDTTCTIWDIEREAVDT---QLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D IWD + AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 307
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + + + ++ W+ + +A+ D ++ V D+ P
Sbjct: 308 LKLHSFESHKDE--IFQVQWSPHNETILASSGTDR-RLNVWDLSKIGEEQSPEDAEDGPP 364
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS---SMGQPVEGGLDP 217
L + H A ++ +W P+ IC+ +D+ +W ++ + + EG +DP
Sbjct: 365 ELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENINNDEDPEGSVDP 420
>sp|O93377|RBP4A_XENLA Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-a PE=1
SV=3
Length = 425
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 18/212 (8%)
Query: 50 WNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHDKEVYDIAWGGV--GVFA 100
WN + ++S D T +WDI E + VD + I H V D++W + +F
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 101 SVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDI 160
SV+ D + ++D R S + + L +N +AT D V + D+
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 303
Query: 161 RFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQP-----VEGGL 215
R L + + H+ + + W+PH+ + ++G D + +WDLS +G+ E G
Sbjct: 304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP 363
Query: 216 DPILAYTAG--AEIEQLQWSSSQPDWVAIAFS 245
+L G A+I W+ ++P WV + S
Sbjct: 364 PELLFIHGGHTAKISDFSWNPNEP-WVICSVS 394
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 101/238 (42%), Gaps = 35/238 (14%)
Query: 6 DLLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTS 61
+LL+ S D + +W IS E + V+ K++ G + + W+ G+
Sbjct: 192 NLLSASDDHTICLWDISAVPKEGKVVDAKTIFTG-----HTAVVEDVSWHLLHESLFGSV 246
Query: 62 SIDTTCTIWDIEREAVDT---QLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDK 116
+ D IWD + AH EV +++ F A+ SAD +V ++DLR+
Sbjct: 247 ADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Query: 117 EHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF-------------- 162
+ +ES + + + ++ W+ + +A+ D ++ V D+
Sbjct: 307 KLKLHSFESHKDE--IFQVQWSPHNETILASSGTDR-RLNVWDLSKIGEEQSPEDAEDGP 363
Query: 163 PTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSS---MGQPVEGGLDP 217
P L + H A ++ +W P+ IC+ +D+ +W ++ + EGG+DP
Sbjct: 364 PELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDTEGGVDP 420
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 85 DKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY 144
D YD G G F SVS + + D E + R + Q+P
Sbjct: 94 DASHYDSEKGEFGGFGSVSGKIEIEIKITHDGE--------------VNRARYMPQNPCI 139
Query: 145 MATIIMDSAKVVVLDIRFPTLP--------VVELQRHQASVNAIAWAPHSSCHICTAGDD 196
+AT S +V + P+ P + L+ HQ ++W P+ S ++ +A DD
Sbjct: 140 IATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEGYGLSWNPNLSGNLLSASDD 199
Query: 197 SQALIWDLSSMGQPVEGG-LDPILAYTAG-AEIEQLQW 232
+WD+S++ P EG +D +T A +E + W
Sbjct: 200 HTICLWDISAV--PKEGKVVDAKTIFTGHTAVVEDVSW 235
>sp|Q6P3H7|RBBP4_DANRE Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3
Length = 424
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + I H
Sbjct: 173 LRGHQKEGY-----GLSWNPNLRSCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHT 227
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D++W + +F SV+ D + ++D R S + + L +N
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEF 287
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +WD
Sbjct: 288 ILATGSADKT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Query: 204 LSSMGQP-----VEGGLDPILAYTAG--AEIEQLQWSSSQPDWVAIAFS 245
LS +G+ E G +L G A+I W+ ++P WV + S
Sbjct: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 394
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 26/158 (16%)
Query: 85 DKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY 144
D YD G G F SVS + + I +E + R + Q+P
Sbjct: 94 DASHYDSEKGEFGGFGSVSGKIEIEI---------KINHEGE-----VNRARYMPQNPCI 139
Query: 145 MATIIMDSAKVVVLDIRFPT--------LPVVELQRHQASVNAIAWAPHSSCHICTAGDD 196
+AT S +V + P+ P + L+ HQ ++W P+ + +A DD
Sbjct: 140 IATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLRSCLLSASDD 199
Query: 197 SQALIWDLSSMGQPVEGGL-DPILAYTAG-AEIEQLQW 232
+WD+S++ P EG + D +T A +E + W
Sbjct: 200 HTICLWDISTV--PKEGKIVDAKTIFTGHTAVVEDVSW 235
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 40/226 (17%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W IS E + V+ K++ G + + W+ G+ +
Sbjct: 193 LLSASDDHTICLWDISTVPKEGKIVDAKTIFTG-----HTAVVEDVSWHLLHESLFGSVA 247
Query: 63 IDTTCTIWDIER-------EAVDTQLIAHDKEVYDIAWGGVGVF--ASVSADGSVRVFDL 113
D IWD AVD AH EV +++ F A+ SAD +V ++DL
Sbjct: 248 DDQKLMIWDTRSNNTSKPSHAVD----AHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 114 RDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF----------- 162
R+ + +ES + + + ++ W+ + +A+ D ++ V D+
Sbjct: 304 RNLKLKLHSFESHKDE--IFQVQWSPHNETILASSGTDR-RLNVWDLSKIGEEQSPEDAE 360
Query: 163 ---PTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
P L + H A ++ +W P+ IC+ +D+ +W ++
Sbjct: 361 DGPPELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
>sp|Q54JS5|WDR24_DICDI WD repeat-containing protein 24 homolog OS=Dictyostelium discoideum
GN=wdr24 PE=3 SV=1
Length = 1023
Score = 58.2 bits (139), Expect = 6e-08, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 58 IGTSSIDTTCTIWDIERE---AVDTQLIAHDKEVYDIAWG--GVGVFASVSADGSVRVFD 112
I T++ + IW+ RE +V+ H + V +AW + + S D ++R++D
Sbjct: 86 IATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMWD 145
Query: 113 LRDKEHSTIIYESSEPDTPLVR-LGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQ 171
+RD +++ I S P + +R + +N A D+ + + DIR PT+ V ++
Sbjct: 146 IRDSANASKITFS--PKSESIRDVQFNPSQANQFAAA-FDNGTIQLWDIRKPTIAVEKIT 202
Query: 172 RHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSS 206
HQ V I W P I + G D +WD S+
Sbjct: 203 SHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSN 237
Score = 37.7 bits (86), Expect = 0.080, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 19/211 (9%)
Query: 7 LLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTT 66
L + + LR+W I D S + + SE + +N ++ + + + T
Sbjct: 133 LTGSQDNTLRMWDIRDSAN----ASKITFSPKSE---SIRDVQFNPSQANQFAAAFDNGT 185
Query: 67 CTIWDIEREAVDTQLI-AHDKEVYDIAWGG--VGVFASVSADGSVRVFDLRDKEHSTIIY 123
+WDI + + + I +H V I W + AS D ++RV+D + + +
Sbjct: 186 IQLWDIRKPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSNGKSLNNVS 245
Query: 124 ESSEPDTPLVRLGWNKQDPRYMATI--IMDSAKVVVLDIRFPTLPVVELQRHQASVNAIA 181
S + R+ W + ++A+ I+D ++ + D++ P +P+ H+ +
Sbjct: 246 TISS----VSRIKWRPGNKWHIASCSSIVD-FQIHIWDVKKPYIPLFSFTDHRDVPTGLI 300
Query: 182 WAPHSSCHICTAGDDSQALIWDLSSMGQPVE 212
W SS C+ DS L+ + +P +
Sbjct: 301 WKSPSSLISCS--KDSHLLLNEFQDSYKPYQ 329
>sp|Q54DS4|Y2056_DICDI WD repeat-containing protein DDB_G0292056 OS=Dictyostelium
discoideum GN=DDB_G0292056 PE=4 SV=1
Length = 1823
Score = 58.2 bits (139), Expect = 6e-08, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 10/182 (5%)
Query: 29 LKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIE--REAVDTQLIAHDK 86
LKS+ N + S++ + DWN P + +SS T IWDIE + + Q +H +
Sbjct: 129 LKSVRNIPQQSKW--EVGVVDWNSQSPNLVASSSNQDT-FIWDIENPKYPLLGQFSSHQR 185
Query: 87 EVYDIAWG--GVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRY 144
+ D++W + A+ SAD V ++DLR + + +++ WN+ +
Sbjct: 186 AISDLSWSLFDNNILATTSADSFVNIWDLRTPKKAVKFKSLKSHILGAIQVKWNRFNSNV 245
Query: 145 MATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDL 204
+A+ + +++ DIR + + H A V I W+ I T D IW+
Sbjct: 246 LAS--AHESYLMIWDIRKDSQEL-NTAVHSAKVYGIDWSHRDEKEILTCSQDKTVKIWNY 302
Query: 205 SS 206
S
Sbjct: 303 PS 304
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 88 VYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT 147
V IA G + S++V DL + I + S+ + +V WN Q P +A+
Sbjct: 101 VNSIAVNRAGTLVCLGGKKSLQVVDLELLKSVRNIPQQSKWEVGVV--DWNSQSPNLVAS 158
Query: 148 IIMDSAKVVVLDIRFPTLPVV-ELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSS 206
+ + DI P P++ + HQ +++ ++W+ + + T DS IWDL +
Sbjct: 159 --SSNQDTFIWDIENPKYPLLGQFSSHQRAISDLSWSLFDNNILATTSADSFVNIWDLRT 216
Query: 207 MGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQI 250
+ V+ + ++ GA Q++W+ + +A A + L I
Sbjct: 217 PKKAVK--FKSLKSHILGA--IQVKWNRFNSNVLASAHESYLMI 256
Score = 37.4 bits (85), Expect = 0.095, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 6 DLLATSS--DFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSI 63
++LAT+S F+ +W + + V+ KSL S G + WN + S+
Sbjct: 198 NILATTSADSFVNIWDLRTPKKAVKFKSL-----KSHILGAI-QVKWNRFNSNVLA-SAH 250
Query: 64 DTTCTIWDIEREAVDTQLIAHDKEVYDIAWG--GVGVFASVSADGSVRVFDL-RDKEHST 120
++ IWDI +++ + H +VY I W + S D +V++++ K ST
Sbjct: 251 ESYLMIWDIRKDSQELNTAVHSAKVYGIDWSHRDEKEILTCSQDKTVKIWNYPSPKPKST 310
Query: 121 IIYESSEP 128
II +S P
Sbjct: 311 II--TSNP 316
>sp|Q5R654|RBBP7_PONAB Histone-binding protein RBBP7 OS=Pongo abelii GN=RBBP7 PE=3 SV=1
Length = 426
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 24/230 (10%)
Query: 33 LNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDI-----EREAVDTQLI--AHD 85
L G++ Y WN + ++S D T +WDI E + VD + + H
Sbjct: 172 LRGHQKEGY-----GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHS 226
Query: 86 KEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPR 143
V D+AW + +F SV+ D + ++D R S + + L +N
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 144 YMATIIMDSAKVVVLDIRFPTLPVVELQRHQASV-NAIAWAPHSSCHICTAGDDSQALIW 202
+AT D V + D+R L + + H+ + + W+PH+ + ++G D + +W
Sbjct: 287 ILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVW 345
Query: 203 DLSSMG--QPVEGGLD--PILAYTAG---AEIEQLQWSSSQPDWVAIAFS 245
DLS +G Q E D P L + G A+I W+ ++P WV + S
Sbjct: 346 DLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVS 394
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 78 DTQLIAHDKEVYDIAWGG--VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTP---- 131
D +L H KE Y ++W G S S D +V ++D+ I ++ T
Sbjct: 169 DLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAV 228
Query: 132 LVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTL--PVVELQRHQASVNAIAWAPHSSCH 189
+ + W+ + + D K+++ D R T P + H A VN +++ P+S
Sbjct: 229 VEDVAWHLLHESLFGS-VADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 190 ICTAGDDSQALIWDLSSM 207
+ T D +WDL ++
Sbjct: 288 LATGSADKTVALWDLRNL 305
Score = 35.8 bits (81), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 134 RLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPV--------VELQRHQASVNAIAWAPH 185
R + Q+P +AT S +V + P P + L+ HQ ++W +
Sbjct: 128 RARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSN 187
Query: 186 SSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAG--AEIEQLQW 232
S H+ +A DD +WD+++ P EG + A G A +E + W
Sbjct: 188 LSGHLLSASDDHTVCLWDINA--GPKEGKIVDAKAVFTGHSAVVEDVAW 234
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 7 LLATSSDF-LRVWRIS---DEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSS 62
LL+ S D + +W I+ E + V+ K++ G + + W+ G+ +
Sbjct: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAVFTG-----HSAVVEDVAWHLLHESLFGSVA 246
Query: 63 IDTTCTIWDIEREAVD--TQLI-AHDKEVYDIAWGGVGVF--ASVSADGSVRVFDLRDKE 117
D +WD + L+ AH EV +++ F A+ SAD +V ++DLR+ +
Sbjct: 247 DDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
Query: 118 HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--------------P 163
+ES + D + W+ + +A+ D ++ V D+ P
Sbjct: 307 LKLHTFESHK-DEIFQVVHWSPHNETILASSGTDR-RLNVWDLSKIGEEQSAEDAEDGPP 364
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
L + H A ++ +W P+ IC+ +D+ IW ++
Sbjct: 365 ELLFIH-GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 405
>sp|Q4I7L0|HAT2_GIBZE Histone acetyltransferase type B subunit 2 OS=Gibberella zeae
(strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084)
GN=HAT2 PE=3 SV=1
Length = 423
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 24/273 (8%)
Query: 3 QKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLT---SFDWNEAEPRRIG 59
Q PD+LAT ++ ++ S N E G +WN E +
Sbjct: 134 QNPDILATLCVDGKILIFDRTKHPLDPTSTGKVNAQIELVGHEAEGFGLNWNPHEEGCLA 193
Query: 60 TSSIDTTCTIWDIEREAVDTQLI-------AHDKEVYDIAWGGV--GVFASVSADGSVRV 110
+ S DTT +WD++ D++++ H + V D+ + + SVS D ++++
Sbjct: 194 SGSEDTTMRLWDLKTLKADSRILNPSRTYRHHTQIVNDVQYHPISKNFIGSVSDDQTLQI 253
Query: 111 FDLRDKE--HSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVV 168
D+R E + ++ + D + L +N +AT D + + D+R V
Sbjct: 254 VDIRHSETNKAAVVAKRGHLDA-INALAFNPNSEVLVATASADKT-IGIWDLRNVKEKVH 311
Query: 169 ELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPV----EGGLDPILAYTAG 224
L+ H +V ++AW P + + +A D + + WDLS +G+ + P L + G
Sbjct: 312 TLEGHNDAVTSLAWHPTEAGILGSASYDRRIIFWDLSRVGEEQLPDDQDDGPPELLFMHG 371
Query: 225 AEIEQL---QWSSSQPDWVAIAFSTK-LQILRV 253
L W+ ++P VA A LQI +V
Sbjct: 372 GHTNHLADFSWNPNEPWLVASAAEDNLLQIWKV 404
>sp|Q6FXI8|HAT2_CANGA Histone acetyltransferase type B subunit 2 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=HAT2 PE=3 SV=1
Length = 419
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 50 WNEAEPRRIGTSSIDTTCTIWDI---EREAVDTQLI--AHDKEVYDIAWGG--VGVFASV 102
+N E + + S D+ +WDI E+ T AH + D+ W +F SV
Sbjct: 187 FNANEKYSLLSGSDDSNIALWDISNFEKNIKPTITFEDAHTDIINDVKWHSSEAHIFGSV 246
Query: 103 SADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF 162
S D ++++FD R S+ I + P L ++ A D+ V + DIR
Sbjct: 247 SEDSTMKLFDKR----SSQIIHNINTKKPYNTLAFSPFSSNLFAAAGTDNL-VYLYDIRD 301
Query: 163 PTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMG-----QPVEGGLDP 217
+ P+ + H+ +V AI + P++ + ++G D + ++WDL +G +E G
Sbjct: 302 VSNPLYAMTGHEDAVTAIEFDPNNDGILYSSGSDRRTIVWDLQEIGAEQTQDEIEDGPPE 361
Query: 218 ILAYTAG 224
+L AG
Sbjct: 362 VLMIHAG 368
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 18/217 (8%)
Query: 3 QKPDLLATSSD-FLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTS 61
+K LL+ S D + +W IS+ ++ ++ + + W+ +E G+
Sbjct: 191 EKYSLLSGSDDSNIALWDISNFEKNIKPTITFE----DAHTDIINDVKWHSSEAHIFGSV 246
Query: 62 SIDTTCTIWDIEREAVDTQLIAHDKEVYDIAWG--GVGVFASVSADGSVRVFDLRDKEHS 119
S D+T ++D +R + I K +A+ +FA+ D V ++D+RD +
Sbjct: 247 SEDSTMKLFD-KRSSQIIHNINTKKPYNTLAFSPFSSNLFAAAGTDNLVYLYDIRDVSNP 305
Query: 120 TIIYESSEPDTPLVRLGWNKQDPRYMA-----TIIMDSAKVVVLDIR-----FPTLPVVE 169
E + N Y + TI+ D ++ + P ++
Sbjct: 306 LYAMTGHEDAVTAIEFDPNNDGILYSSGSDRRTIVWDLQEIGAEQTQDEIEDGPPEVLMI 365
Query: 170 LQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSS 206
H+ S+N IA P+ + + +A +D+ IW SS
Sbjct: 366 HAGHKTSINDIAVNPNINWLVASAEEDNIVQIWKCSS 402
>sp|Q54ED4|GRWD1_DICDI Glutamate-rich WD repeat-containing protein 1 OS=Dictyostelium
discoideum GN=grwd1 PE=3 SV=1
Length = 482
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 28/222 (12%)
Query: 3 QKPDLLATSSDF--LRVWRISDEDRRVELKSLLNGNKNSEYCGPLTS----------FDW 50
Q+ +++AT SD + +W I++ LK+L N + PL + DW
Sbjct: 204 QQSNIVATWSDNRSVYIWNIANH-----LKALDNETVAPKQTAPLHTISNHSIEGYALDW 258
Query: 51 NEAEPRRIGTSSIDTTCTIWDIEREA--VDTQLI-AHDKEVYDIAWGGV--GVFASVSAD 105
+ R+ T + + + + DTQ H + V DI W VFAS S D
Sbjct: 259 SPKIAGRLATGDCNNSIFVTNASESTWKTDTQAFKGHTESVEDIQWSPSEEKVFASCSID 318
Query: 106 GSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF--P 163
+VR++D+R K I ++ D ++ W++ + Y+ D V D+R
Sbjct: 319 QTVRIWDIR-KPKPAITVKAHTADVNVI--SWSR-NVEYLLVSGCDDGSFRVWDLRAFKD 374
Query: 164 TLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLS 205
PV + + H + +I W P+ + + D Q IWD S
Sbjct: 375 NSPVSDFKYHTGPITSIEWNPYEESQVIVSSSDDQVTIWDFS 416
Score = 34.3 bits (77), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 41 YCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIERE 75
+ GP+TS +WN E ++ SS D TIWD E
Sbjct: 384 HTGPITSIEWNPYEESQVIVSSSDDQVTIWDFSLE 418
>sp|O74855|NLE1_SCHPO Ribosome assembly protein C18.05c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC18.05c PE=3 SV=1
Length = 502
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 99/255 (38%), Gaps = 49/255 (19%)
Query: 35 GNKNSEYCGPLTSFDWN------EAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEV 88
G+ + P+ + W ++ P + + S D T IW+++ + L H +
Sbjct: 213 GDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPI 272
Query: 89 YDIAWGGVGVFASVSADGSVRVFDLRD-------KEHSTIIYESSEPDTPLVRLG----- 136
+ WGG S S D ++R++D +D K H+ + S ++R G
Sbjct: 273 TCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHT 332
Query: 137 ----------WNKQDPRYMATIIM---------DSAKVVVLDIRFPTLPVVELQRHQASV 177
K RY A + D ++++ D + T P+ ++ HQ V
Sbjct: 333 DFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVV 392
Query: 178 NAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAG--AEIEQLQWSSS 235
N +++P C I TA DS +WD G LA G A + Q WS+
Sbjct: 393 NHASFSPDGRC-IATASFDSSVRLWD---------GKTGKFLATLRGHVAAVYQCAWSTD 442
Query: 236 QPDWVAIAFSTKLQI 250
V+ + T L++
Sbjct: 443 SRLLVSSSQDTTLKV 457
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 43 GPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAWG-GVGVFAS 101
G + S ++ + R+ T S D T +WD + + + H V +AW + A+
Sbjct: 135 GTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIAT 194
Query: 102 VSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNK------QDPRYMATIIMDSAKV 155
S D ++R +D K+ S I P++ L W P +A+ D+ V
Sbjct: 195 GSMDNTIRFWD--PKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNT-V 251
Query: 156 VVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
+ +++ TL + L H A + + W + I ++ D IWD
Sbjct: 252 RIWNVKLRTL-LFTLSGHTAPITCVRWGGQN--WIYSSSYDKTIRIWD 296
Score = 35.4 bits (80), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 56 RRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAWGGVGV-FASVSADGSVRVF 111
R + +SS DTT +WD+ + + L H+ +V+ + W G AS AD +VR++
Sbjct: 444 RLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
>sp|Q2GVT8|SEC31_CHAGB Protein transport protein SEC31 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=SEC31 PE=3 SV=1
Length = 1258
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 36 NKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQL---IAHDKEVYDIA 92
++++++ GP+ + +N P+ + T+ +WD + +L AHD + +A
Sbjct: 113 SRDTKHTGPIKALQFNPLRPQVLATAGSKGELFVWDTNDTSTAFRLGTAAAHDIDC--VA 170
Query: 93 WGG--VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIM 150
W + A+ SA G V V+DL+ K+ S + + +P + + W+ + + T
Sbjct: 171 WNRKVSNILATGSAGGFVTVWDLKTKKASLTLNNNRKP---VSAIAWDPTNSTNLLTATS 227
Query: 151 DSAKVVVL--DIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
D ++L ++R P LQ H + +++W + + G D++ L+W+
Sbjct: 228 DDNTPLILLWNLRNSQAPEKTLQGHDQGILSLSWCQQDPGLLISCGKDNRTLVWN 282
Score = 38.1 bits (87), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 81/211 (38%), Gaps = 64/211 (30%)
Query: 62 SIDTTCTIWDIEREAVDTQL-------IAHDKEVYDIAWGGV------GVFASVSADGSV 108
S +T +W++ +A+D L I+ + YDIAWG GV A DGS+
Sbjct: 37 SDETKLELWELNLDALDQGLELQPVASISTESRFYDIAWGAPSDEHPRGVVAGAMEDGSL 96
Query: 109 RVFDL------------RDKEHSTIIYE-SSEPDTPLV---------------------- 133
+++D RD +H+ I P P V
Sbjct: 97 QLWDAAKLLAGEEAVMSRDTKHTGPIKALQFNPLRPQVLATAGSKGELFVWDTNDTSTAF 156
Query: 134 RLG-----------WNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAW 182
RLG WN++ +AT V V D++ + L ++ V+AIAW
Sbjct: 157 RLGTAAAHDIDCVAWNRKVSNILATGSA-GGFVTVWDLKTKKASLT-LNNNRKPVSAIAW 214
Query: 183 APHSSCHICTAGDDSQA---LIWDLSSMGQP 210
P +S ++ TA D L+W+L + P
Sbjct: 215 DPTNSTNLLTATSDDNTPLILLWNLRNSQAP 245
>sp|Q873A1|SEC31_NEUCR Protein transport protein sec31 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=sec31 PE=3 SV=1
Length = 1256
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 36 NKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQL---IAHDKEVYDIA 92
++ +++ GP+ + +N P+ + T+ +WD+ + +L AHD + +A
Sbjct: 113 SRTTKHTGPIKALQFNPLRPQVLATAGAKGELFVWDVNDTSAPFRLGTAAAHDIDC--LA 170
Query: 93 WGG--VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIM 150
W + A+ A G V V+DL+ K+ S + + + + W+ ++ + T
Sbjct: 171 WNPKVANILATGGAGGFVTVWDLKTKKASLTLNNHRKA---VSAIAWDPENSTKLLTASS 227
Query: 151 DSAKVVVL--DIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 203
D V+L ++R P LQ H + +++W + + + G D++ LIW+
Sbjct: 228 DDTAPVILLWNLRNSQAPEKTLQGHDQGILSLSWCQQDAGLLLSCGKDNRTLIWN 282
>sp|Q0IQN5|RTOR1_ORYSJ Regulatory-associated protein of TOR 1 OS=Oryza sativa subsp.
japonica GN=RAPTOR1 PE=2 SV=2
Length = 1359
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 86/186 (46%), Gaps = 10/186 (5%)
Query: 7 LLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTT 66
L+ +S +R+WR + +L + + + G FDW + + + ++
Sbjct: 1106 LVGSSDGNVRIWRNYTQKGGQKLVTAFSSVQGYRSAGRSIVFDWQQQSGYLYASGDM-SS 1164
Query: 67 CTIWDIEREAVDTQLIAHDKEVYDIAWGGV--GVFASVSADGSVRVFDLRDKEHSTIIYE 124
+WD+++E V+T D + ++ V G FA+ D SVR+FD+R + ++Y
Sbjct: 1165 ILVWDLDKEQVNTIQSTADSGISALSASQVRCGQFAAGFLDASVRIFDVRTPDR--LVY- 1221
Query: 125 SSEPDTP----LVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAI 180
++ P P +V +G+ Y + + LD+R + P + ++ H+ S+ A+
Sbjct: 1222 TARPHAPRSEKVVGIGFQPGFDPYKIVSASQAGDIQFLDVRRASEPYLTIEAHRGSLTAL 1281
Query: 181 AWAPHS 186
A H+
Sbjct: 1282 AVHRHA 1287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,954,138
Number of Sequences: 539616
Number of extensions: 3659609
Number of successful extensions: 11683
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 558
Number of HSP's that attempted gapping in prelim test: 9645
Number of HSP's gapped (non-prelim): 2136
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)