Your job contains 1 sequence.
>035561
MYNSQENSVTKLSRSDIQEELESAQRKHLEQMILPSIVEVEDLGPLFYQDSLDFALRIKQ
CLKDSRELQRNLEARIRKNMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVVPK
AIGLHLYHGWKAWREEAKADLKRRLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDK
SRWEMDPVAVPYAVSNKIVESARIRHDWGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFD
ELYMKMLACGIPTAVHVMRIPFSELDFYQQFLLIVRLAYLSLNGLWKTGTVSFWRDLILE
NVRNTNDDIMMMIVFPLLDCIIPYSVRMKLGMAWPQYMDQSVGSTWYLGWQSEVEMSFNS
RKTDDLNWSIWFLIRTAVYGYVLFHILRFMKRKIPRLLGFGPMRRDPNFRKLRRVKAYFN
YRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAF
QEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVREL
FQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMAT
TRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT
ALLRPIELKLVPVALEGSAFRSKFLDTDELMSYCGWFATFSGVVPKWFRKTKIVKKISRM
LVDHLGLTLTKEDLQNVVDLMEPYGQISNGIELLTPPLDWTRETKLPHAVWAAGRGLIAL
LLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCFGSYAAAQ
LLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGPDDSPAIYYSSNAAAAMSMGSNHEYEM
ATKVEKVYDLAYYKAKEMLQKNRKVLEKVVEELLEYEILTGKDLERLMDSNGGIREKEPF
FLSKVDYQEVFSCHLCIFI
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035561
(979 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2103055 - symbol:emb2458 "embryo defective 245... 3823 0. 2
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 421 1.3e-41 2
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 413 1.2e-40 2
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 413 1.2e-40 2
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 393 2.7e-40 2
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 393 2.7e-40 2
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 385 4.1e-40 2
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 377 7.7e-40 2
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 379 7.4e-39 2
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 407 2.4e-38 2
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 394 1.4e-37 2
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 366 2.9e-37 2
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 366 2.9e-37 2
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 372 9.1e-37 2
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 372 9.1e-37 2
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 376 2.4e-36 2
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 373 2.8e-36 2
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 368 3.1e-36 2
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 369 8.6e-36 2
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 369 8.6e-36 2
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 375 2.7e-35 2
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 405 3.6e-35 2
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 372 5.8e-35 2
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 373 9.0e-35 2
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 358 1.1e-34 2
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 401 1.7e-34 3
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 375 2.6e-34 2
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 397 7.9e-34 2
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 397 7.9e-34 2
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 370 2.9e-33 2
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 344 3.2e-33 2
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 374 7.3e-33 2
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 390 1.1e-32 2
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 391 1.2e-32 2
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 376 3.3e-32 2
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 376 5.2e-32 2
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 385 5.3e-32 2
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 385 5.3e-32 2
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 338 1.1e-31 3
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 379 2.0e-31 1
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 356 3.7e-31 2
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 356 3.7e-31 2
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 343 8.2e-31 3
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 341 1.5e-30 3
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 371 1.5e-30 1
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 356 1.8e-30 3
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 378 1.8e-30 3
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 371 1.9e-30 2
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 359 4.7e-30 1
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 374 1.4e-29 2
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 364 1.5e-29 2
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 337 3.3e-29 2
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 337 3.3e-29 2
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 333 3.7e-29 2
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 338 5.2e-29 2
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 340 5.4e-29 2
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 338 6.0e-29 2
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 337 8.0e-29 2
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 332 8.1e-29 2
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 338 8.6e-29 2
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 354 1.0e-28 1
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 335 1.1e-28 2
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 338 1.9e-28 2
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 354 2.0e-28 2
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 337 2.2e-28 2
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 349 3.1e-28 1
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 351 5.2e-28 3
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 337 5.3e-28 3
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 323 6.7e-28 1
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 345 8.2e-28 1
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 349 8.8e-28 2
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 356 1.0e-27 2
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 343 1.2e-27 1
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 359 1.2e-27 3
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 355 1.3e-27 2
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 355 1.3e-27 2
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 344 1.3e-27 1
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 355 1.5e-27 3
SGD|S000005643 - symbol:RPT5 "ATPase of the 19S regulator... 319 1.8e-27 1
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 359 1.9e-27 3
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 355 2.0e-27 3
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 340 3.3e-27 1
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 354 4.4e-27 3
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 301 9.4e-27 2
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 336 9.9e-27 1
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 323 3.2e-26 2
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "... 331 4.6e-26 1
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 340 6.0e-26 2
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 307 6.9e-26 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 307 6.9e-26 1
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 328 1.0e-25 3
WB|WBGene00010562 - symbol:cdc-48.3 species:6239 "Caenorh... 325 1.2e-25 1
CGD|CAL0002261 - symbol:RPT5 species:5476 "Candida albica... 309 1.3e-25 2
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 325 1.5e-25 1
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 311 2.1e-25 1
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 319 2.8e-25 2
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 315 1.6e-24 3
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 315 1.8e-24 1
UNIPROTKB|P96281 - symbol:Rv0435c "Transitional endoplasm... 314 1.9e-24 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 285 2.3e-24 2
WARNING: Descriptions of 563 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2103055 [details] [associations]
symbol:emb2458 "embryo defective 2458" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 Pfam:PF01434 SMART:SM00382 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0017111 IPI:IPI00526893 RefSeq:NP_187084.6 UniGene:At.40851
ProteinModelPortal:F4J3N2 SMR:F4J3N2 PRIDE:F4J3N2
EnsemblPlants:AT3G04340.1 GeneID:819589 KEGG:ath:AT3G04340
OMA:VIIFVED ArrayExpress:F4J3N2 Uniprot:F4J3N2
Length = 1320
Score = 3823 (1350.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 716/967 (74%), Positives = 827/967 (85%)
Query: 6 ENSVTKLSRSDIQEELESAQRKHLEQMILPSIVEVEDLGPLFYQDSLDFALRIKQCLKDS 65
E+S+TKLSRS+I++EL +AQRKHLEQMILP+++E+E++ P F +DS+DF+LRIK+ L++S
Sbjct: 335 ESSITKLSRSEIKQELVNAQRKHLEQMILPNVLELEEVDPFFDRDSVDFSLRIKKRLEES 394
Query: 66 RELQRNLEARIRKNMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVVPKAIGLH 125
++LQR+L+ RIRK MKK G EK FV +TPE E VKGFPE E+KWMFG+KEVVVPKAI LH
Sbjct: 395 KKLQRDLQNRIRKRMKKFGEEKLFVQKTPEGEAVKGFPEAEVKWMFGEKEVVVPKAIQLH 454
Query: 126 LYHGWKAWREEAKADLKRRLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEM 185
L HGWK W+EEAKADLK++LLEDVDFGKQY+AQRQE++LLDRDRVVSKTWYNEDKSRWEM
Sbjct: 455 LRHGWKKWQEEAKADLKQKLLEDVDFGKQYIAQRQEQVLLDRDRVVSKTWYNEDKSRWEM 514
Query: 186 DPVAVPYAVSNKIVESARIRHDWGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDELYMK 245
DP+AVPYAVS K+++SARIRHD+ MY++LKGDDKEFYVDIKE+E+LFE FGGFD LY+K
Sbjct: 515 DPMAVPYAVSRKLIDSARIRHDYAVMYVALKGDDKEFYVDIKEYEMLFEKFGGFDALYLK 574
Query: 246 MLACGIPTAVHVMRIPFSELDFYQQFLLIVRLAYLSLNGLWKTGTVSFWRDLILENVRNT 305
MLACGIPT+VH+M IP SEL QQFLL+ R+ N L KT VS +D +LE +RN
Sbjct: 575 MLACGIPTSVHLMWIPMSELSLQQQFLLVTRVVSRVFNALRKTQVVSNAKDTVLEKIRNI 634
Query: 306 NDDIMMMIVFPLLDCIIPYSVRMKLGMAWPQYMDQSVGSTWYLGWQSEVEMSFNSRKTDD 365
NDDIMM +VFP+++ IIPY +R++LGMAWP+ ++Q+VGSTWYL WQSE EM+F SR T+D
Sbjct: 635 NDDIMMAVVFPVIEFIIPYQLRLRLGMAWPEEIEQTVGSTWYLQWQSEAEMNFKSRNTED 694
Query: 366 LNWSIWFLIRTAVYGYVLFHILRFMKRKIPRLLGFGPMRRDPNFRKLRRVKAYFNYRVRR 425
W +WFLIR+++YG+VL+H+ RF+KRK+PRLLG+GP RRDPN RK RVK+YF YR RR
Sbjct: 695 FQWFLWFLIRSSIYGFVLYHVFRFLKRKVPRLLGYGPFRRDPNVRKFWRVKSYFTYRKRR 754
Query: 426 IKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGA 485
IK+K+KAGIDPIK AF+RMKRVKNPPIPLK+FAS+ESMREEINEVVAFLQNP AFQEMGA
Sbjct: 755 IKQKRKAGIDPIKTAFDRMKRVKNPPIPLKNFASIESMREEINEVVAFLQNPKAFQEMGA 814
Query: 486 RAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTAR 545
RAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSA+NVRELFQTAR
Sbjct: 815 RAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAANVRELFQTAR 874
Query: 546 DLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIK 605
DLAPVIIFVEDFDLFAGVRG+F+HTKQQDHESFINQLLVELDGFEKQDGVVLMATTRN K
Sbjct: 875 DLAPVIIFVEDFDLFAGVRGKFVHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNHK 934
Query: 606 QIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRP 665
QIDEAL+RPGRMDR+F+LQ PT+ ERE+IL AA+ETMD EL+DLVDWRKV+EKT LLRP
Sbjct: 935 QIDEALRRPGRMDRVFHLQSPTEMERERILHNAAEETMDRELVDLVDWRKVSEKTTLLRP 994
Query: 666 IELKLVPVALEGSAFRSKFLDTDELMSYCGWFATFSGVVPKWFRKTKIVKKISRMLVDHL 725
IELKLVP+ALE SAFRSKFLDTDEL+SY WFATFS +VP W RKTK+ K + +MLV+HL
Sbjct: 995 IELKLVPMALESSAFRSKFLDTDELLSYVSWFATFSHIVPPWLRKTKVAKTMGKMLVNHL 1054
Query: 726 GLTLTKEDLQNVVDLMEPYGQISNGIELLTPPLDWTRETKLPHAVWAAGRGLIALLLPNF 785
GL LTK+DL+NVVDLMEPYGQISNGIELL P +DWTRETK PHAVWAAGR LI LL+PNF
Sbjct: 1055 GLNLTKDDLENVVDLMEPYGQISNGIELLNPTVDWTRETKFPHAVWAAGRALITLLIPNF 1114
Query: 786 DTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCFGSYAAAQLLLPF 845
D V+NLWLEP +WEGIGCTKITK GS GN ESRSYLEKKLVFCFGS+ A+Q+LLP
Sbjct: 1115 DVVENLWLEPSSWEGIGCTKITKVTSGGSAIGNTESRSYLEKKLVFCFGSHIASQMLLPP 1174
Query: 846 GEENLLSSSEIKQAQEIATRMVLQYGWGPDDXXXXXXXXXXXXXXXXXXXHEYEMATKVE 905
G+EN LSSSEI +AQEIATRMVLQYGWGPDD HEYEMA KVE
Sbjct: 1175 GDENFLSSSEITKAQEIATRMVLQYGWGPDDSPAVYYATNAVSALSMGNNHEYEMAGKVE 1234
Query: 906 KVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLMDSNGGIREKEPFFLSKV 965
K+YDLAY KAK ML KNR +EILT KDLER++ NGGIREKEPFFLS
Sbjct: 1235 KIYDLAYEKAKGMLLKNRRVLEKITEELLEFEILTHKDLERIVHENGGIREKEPFFLSGT 1294
Query: 966 DYQEVFS 972
+Y E S
Sbjct: 1295 NYNEALS 1301
Score = 39 (18.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 7/36 (19%), Positives = 23/36 (63%)
Query: 64 DSRELQRNLEARIRKNMKKLGNEKRFVVRTPEDEVV 99
+ +LQ+ + + + ++M++L E+ +++ D++V
Sbjct: 208 EKEKLQKEIMSGLYRDMRRLRKERDLLMKRA-DKIV 242
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 421 (153.3 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 112/333 (33%), Positives = 179/333 (53%)
Query: 442 ERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGK 501
E KRVK KD A + ++E+ EVV FL++P F E+GAR P+GVL+VG GTGK
Sbjct: 153 EEKKRVK-----FKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLVGPPGTGK 207
Query: 502 TSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFA 561
T LA A A EA VP ++ + ++VG AS VR+LF+ A+ AP +IF+++ D
Sbjct: 208 TLLAKACAGEAGVPFFSISGSDF-VEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVG 266
Query: 562 GVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIF 621
RG + + E +NQLLVE+DGF +G++++A T +D AL RPGR DR
Sbjct: 267 RQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQI 326
Query: 622 NLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELK--LVPVALEGSA 679
+ +P RE +L++ A+ +E ++L + +A +T +L+ L AL +
Sbjct: 327 TVDRPDVIGREAVLKVHARNKPLDETVNL---KSIAMRTPGFSGADLENLLNEAALVAAR 383
Query: 680 FRSKFLDTDELMSYCGWFATFSGVVPKWFRKTKIVKKISRMLVDH-------LGLTLTKE 732
K +D ++ AT V+ +K++++ K R +V + +GL L +
Sbjct: 384 QNKKKIDARDIDE-----AT-DRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVLDEA 437
Query: 733 DLQNVVDLMEPYGQISNGIELLTPPLDWTRETK 765
D+ + V ++ P GQ + G ++ P D +TK
Sbjct: 438 DMVHKVTIV-PRGQ-AGGYAVMLPREDRYFQTK 468
Score = 91 (37.1 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 40/193 (20%), Positives = 78/193 (40%)
Query: 774 GRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCF 833
G +I L+L D V + + P G + + ++ PE L K+V
Sbjct: 426 GHTVIGLVLDEADMVHKVTIVPRGQAGGYAVMLPREDRY--FQTKPE----LLDKIVGLL 479
Query: 834 GSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYG---------WGPDDXXXXXXXX 884
G A +++ FGE + + ++ ++A IA RMV ++G +G
Sbjct: 480 GGRVAEEII--FGEVSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGR 537
Query: 885 XXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDL 944
YE+ +++++ Y +AK++L +NR E L + +
Sbjct: 538 DFNNEQNYSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQI 597
Query: 945 ERLMDSNGGIREK 957
+ L+D +G + E+
Sbjct: 598 KHLID-HGTLPER 609
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 413 (150.4 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 103/308 (33%), Positives = 161/308 (52%)
Query: 355 EMSFNSRKTDDLNWSIWFLIRTAVYGYVLFHILRFMKRKIPRLLGFGPMRRDPNFRKLRR 414
E FN R++ N+ I F + + G+ ++ FM RL + + N+R
Sbjct: 53 ENFFNRRRSKKWNYFIIFFLGVCL-GFAIWPF--FMTIITYRLF-YKDNFNNTNYRTNNS 108
Query: 415 VKAYFNYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFL 474
+ +Y + K+ G P+K+ PI ++ A ++ + E+ EVV F+
Sbjct: 109 STSLKSYGNEKNKKSDNNGKVPMKDQSPNKVSPHFKPIRFEEIAGIDESKLELLEVVDFI 168
Query: 475 QNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSA 534
+N + EMGAR P+GVL+VG G+GKT LA A+A EA VP + E ++VGQ A
Sbjct: 169 KNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEF-IEIYVGQGA 227
Query: 535 SNVRELFQTARDLAPVIIFVEDFDLFAGVR--GQFIHTKQQDHESFINQLLVELDGFEKQ 592
+R+LF AR +AP I+F+++ D G R G Q++H+ +NQLLVE+DGF
Sbjct: 228 KRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNT 287
Query: 593 DGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVD 652
++++ T I +D AL RPGR DRI + P + R+KIL I ++ + + L D
Sbjct: 288 VHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSD--LKLED 345
Query: 653 WRKVAEKT 660
K+A T
Sbjct: 346 IEKIARLT 353
Score = 103 (41.3 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 34/136 (25%), Positives = 61/136 (44%)
Query: 822 RSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGW----GPDDX 877
+S +E KL C G A +++ E + +SS+I +A EIA +MV ++G GP +
Sbjct: 460 KSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNY 519
Query: 878 XXXXXXXXXXXXXXXXXXHEYEMATK--VEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXX 935
E+ K VEK L+ +E+L+++R
Sbjct: 520 KKRMGDGYSSNRLSAQTVSSIEVEVKSLVEKGKSLS----EEILRRHRKELDNLAFALLD 575
Query: 936 YEILTGKDLERLMDSN 951
E L+G++++ ++D N
Sbjct: 576 KETLSGEEIKNIIDPN 591
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 413 (150.4 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 103/308 (33%), Positives = 161/308 (52%)
Query: 355 EMSFNSRKTDDLNWSIWFLIRTAVYGYVLFHILRFMKRKIPRLLGFGPMRRDPNFRKLRR 414
E FN R++ N+ I F + + G+ ++ FM RL + + N+R
Sbjct: 53 ENFFNRRRSKKWNYFIIFFLGVCL-GFAIWPF--FMTIITYRLF-YKDNFNNTNYRTNNS 108
Query: 415 VKAYFNYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFL 474
+ +Y + K+ G P+K+ PI ++ A ++ + E+ EVV F+
Sbjct: 109 STSLKSYGNEKNKKSDNNGKVPMKDQSPNKVSPHFKPIRFEEIAGIDESKLELLEVVDFI 168
Query: 475 QNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSA 534
+N + EMGAR P+GVL+VG G+GKT LA A+A EA VP + E ++VGQ A
Sbjct: 169 KNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEF-IEIYVGQGA 227
Query: 535 SNVRELFQTARDLAPVIIFVEDFDLFAGVR--GQFIHTKQQDHESFINQLLVELDGFEKQ 592
+R+LF AR +AP I+F+++ D G R G Q++H+ +NQLLVE+DGF
Sbjct: 228 KRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNT 287
Query: 593 DGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVD 652
++++ T I +D AL RPGR DRI + P + R+KIL I ++ + + L D
Sbjct: 288 VHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSD--LKLED 345
Query: 653 WRKVAEKT 660
K+A T
Sbjct: 346 IEKIARLT 353
Score = 103 (41.3 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 34/136 (25%), Positives = 61/136 (44%)
Query: 822 RSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGW----GPDDX 877
+S +E KL C G A +++ E + +SS+I +A EIA +MV ++G GP +
Sbjct: 460 KSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNY 519
Query: 878 XXXXXXXXXXXXXXXXXXHEYEMATK--VEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXX 935
E+ K VEK L+ +E+L+++R
Sbjct: 520 KKRMGDGYSSNRLSAQTVSSIEVEVKSLVEKGKSLS----EEILRRHRKELDNLAFALLD 575
Query: 936 YEILTGKDLERLMDSN 951
E L+G++++ ++D N
Sbjct: 576 KETLSGEEIKNIIDPN 591
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 393 (143.4 bits), Expect = 2.7e-40, Sum P(2) = 2.7e-40
Identities = 89/240 (37%), Positives = 132/240 (55%)
Query: 421 YRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAF 480
Y + R++ + G + +M K+ + D A ++ +EE+ E+V FL+NP F
Sbjct: 122 YFMNRMQGGGRGGAMGFGKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKF 181
Query: 481 QEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVREL 540
+G + P+G L+VG GTGKT LA AIA EA VP + + ++VG AS VR++
Sbjct: 182 SRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDF-VEMFVGVGASRVRDM 240
Query: 541 FQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMAT 600
F+ A+ AP I+F+++ D RG + E +NQLLVE+DGFE +GV+++A
Sbjct: 241 FEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAA 300
Query: 601 TRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
T +D AL RPGR DR + P REKIL + A++T L VD R +A T
Sbjct: 301 TNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKILGVHARKT---PLGPDVDLRIIARGT 357
Score = 111 (44.1 bits), Expect = 2.7e-40, Sum P(2) = 2.7e-40
Identities = 51/227 (22%), Positives = 94/227 (41%)
Query: 729 LTKEDLQNVVDLMEPYGQISNGIELLTPPLDWTRETKLPHAVWAAGRGLIALLLPNFDTV 788
+T ED +N D ++ G E + L T++ K A AG ++ L LP D V
Sbjct: 384 VTMEDFENAKD------KVMMGAERRSMVL--TQDQKEKTAYHEAGHAVVGLALPMCDPV 435
Query: 789 DNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCFGSYAAAQLLLPFGEE 848
+ P G + + ++ + R ++KL AA +L +GE+
Sbjct: 436 YKATIIP---RGGALGMVVSLPEMDRLNWH---RDECQQKLAMTMAGKAAE--ILKYGED 487
Query: 849 NLLS--SSEIKQAQEIATRMVLQYGW----GPDDXXXXXXXXXXXXXXXXXXXHEYEMAT 902
++ + + +I+QA ++A MV+++G G D H E+
Sbjct: 488 HVSNGPAGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIE 547
Query: 903 K-VEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLM 948
+ V++ Y +A +L + R YE LTG++++R+M
Sbjct: 548 EEVKRFIQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVM 594
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 393 (143.4 bits), Expect = 2.7e-40, Sum P(2) = 2.7e-40
Identities = 89/240 (37%), Positives = 132/240 (55%)
Query: 421 YRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAF 480
Y + R++ + G + +M K+ + D A ++ +EE+ E+V FL+NP F
Sbjct: 122 YFMNRMQGGGRGGAMGFGKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKF 181
Query: 481 QEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVREL 540
+G + P+G L+VG GTGKT LA AIA EA VP + + ++VG AS VR++
Sbjct: 182 SRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDF-VEMFVGVGASRVRDM 240
Query: 541 FQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMAT 600
F+ A+ AP I+F+++ D RG + E +NQLLVE+DGFE +GV+++A
Sbjct: 241 FEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAA 300
Query: 601 TRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
T +D AL RPGR DR + P REKIL + A++T L VD R +A T
Sbjct: 301 TNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKILGVHARKT---PLGPDVDLRIIARGT 357
Score = 111 (44.1 bits), Expect = 2.7e-40, Sum P(2) = 2.7e-40
Identities = 51/227 (22%), Positives = 94/227 (41%)
Query: 729 LTKEDLQNVVDLMEPYGQISNGIELLTPPLDWTRETKLPHAVWAAGRGLIALLLPNFDTV 788
+T ED +N D ++ G E + L T++ K A AG ++ L LP D V
Sbjct: 384 VTMEDFENAKD------KVMMGAERRSMVL--TQDQKEKTAYHEAGHAVVGLALPMCDPV 435
Query: 789 DNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCFGSYAAAQLLLPFGEE 848
+ P G + + ++ + R ++KL AA +L +GE+
Sbjct: 436 YKATIIP---RGGALGMVVSLPEMDRLNWH---RDECQQKLAMTMAGKAAE--ILKYGED 487
Query: 849 NLLS--SSEIKQAQEIATRMVLQYGW----GPDDXXXXXXXXXXXXXXXXXXXHEYEMAT 902
++ + + +I+QA ++A MV+++G G D H E+
Sbjct: 488 HVSNGPAGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIE 547
Query: 903 K-VEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLM 948
+ V++ Y +A +L + R YE LTG++++R+M
Sbjct: 548 EEVKRFIQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEEIKRVM 594
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 385 (140.6 bits), Expect = 4.1e-40, Sum P(2) = 4.1e-40
Identities = 80/199 (40%), Positives = 119/199 (59%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ +D A V+ +EE+ E++ FL++P F ++G R P+GVL+VG GTGKT LA A+A E
Sbjct: 150 VTFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGE 209
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTK 571
A VP ++ + ++VG AS VR+LF + AP IIF+++ D RG +
Sbjct: 210 AGVPFFSISGSDF-VEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGAGLGGG 268
Query: 572 QQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER 631
+ E +NQLLVE+DGFE +GV+L+A T +D AL RPGR DR + +P R
Sbjct: 269 HDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGR 328
Query: 632 EKILRIAAQETMDEELIDL 650
E IL++ ++T +DL
Sbjct: 329 EMILKVHTKKTPLASDVDL 347
Score = 116 (45.9 bits), Expect = 4.1e-40, Sum P(2) = 4.1e-40
Identities = 57/238 (23%), Positives = 99/238 (41%)
Query: 721 LVDHLGLTLTKEDLQNVV--DLMEPYGQISNGIELLTPPLDWTRETKLPHAVWAAGRGLI 778
+V+ L ++D V D + ++ G+E + + + E K A AG L+
Sbjct: 365 VVNEAALLAARKDKSFVEMKDFDDAKDKVLMGVERRSMVI--SEEEKKNTAYHEAGHTLV 422
Query: 779 ALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCFGSYAA 838
A L+P D V + + P +G T E + S N ES L ++ G AA
Sbjct: 423 AKLIPGTDPVHKVSIIPRG-RALGVTMQLPIEDKHSY--NKES---LLNRIAVLMGGRAA 476
Query: 839 AQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGPD-DXXXXXXXXXXXXXXXXXXXHE 897
+++ F E + ++I++A EIA +MV ++G H+
Sbjct: 477 EEII--FNELTTGAGNDIERATEIARKMVCEWGMSEKMGPVTFGKKEESIFLGRDMSMHK 534
Query: 898 -YEMATKVE------KVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLM 948
Y AT VE K+ D +Y + K++L +N E LTG +++R++
Sbjct: 535 NYSEATAVEIDEEIRKIIDGSYSRVKQLLNENLSVLHCLATQLIEKENLTGDEVDRII 592
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 377 (137.8 bits), Expect = 7.7e-40, Sum P(2) = 7.7e-40
Identities = 83/219 (37%), Positives = 126/219 (57%)
Query: 443 RMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKT 502
+ + V + D A + + E+ EVV FL+NP + +GA+ P+G L+VG GTGKT
Sbjct: 238 KFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKT 297
Query: 503 SLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAG 562
LA A+A EA VP + A E L+VG AS VR+LF+ A+ AP I+F+++ D
Sbjct: 298 LLARAVAGEAGVPFFSCAASEF-VELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGR 356
Query: 563 VRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFN 622
RG + + E INQLL E+DGF GV+++A T +D AL RPGR DR
Sbjct: 357 QRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 416
Query: 623 LQKPTQSEREKILRIAAQ-ETMDEELIDLVDWRKVAEKT 660
+ +P + R +IL++ ++ + + ++ VD+ KVA +T
Sbjct: 417 VDRPDVAGRVQILKVHSRGKAIGKD----VDYEKVARRT 451
Score = 128 (50.1 bits), Expect = 7.7e-40, Sum P(2) = 7.7e-40
Identities = 43/169 (25%), Positives = 75/169 (44%)
Query: 761 TRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPE 820
+ E K A AG L+ L+P +D V + + P G G T +E+ +
Sbjct: 502 SEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER--LESGLY 558
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPD--D 876
SRSYLE ++ G A +++ FG+EN+ + S++ Q +A +MV ++G+
Sbjct: 559 SRSYLENQMAVALGGRVAEEVI--FGDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQ 616
Query: 877 XXXXXXXXXXXXXXXXXXXHEYEMAT------KVEKVYDLAYYKAKEML 919
+Y MAT +V ++ + AY +AKE++
Sbjct: 617 VAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEII 665
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 379 (138.5 bits), Expect = 7.4e-39, Sum P(2) = 7.4e-39
Identities = 85/218 (38%), Positives = 124/218 (56%)
Query: 443 RMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKT 502
+ + V + D A + + E+ EVV FL+NP + +GA+ P+G L+VG GTGKT
Sbjct: 250 KFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKT 309
Query: 503 SLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAG 562
LA A+A EA VP + A E L+VG AS VR+LF+ A+ AP I+F+++ D
Sbjct: 310 LLARAVAGEAGVPFFSCAASEF-VELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGR 368
Query: 563 VRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFN 622
RG + + E INQLL E+DGF GV+++A T +D AL RPGR DR
Sbjct: 369 QRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 428
Query: 623 LQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
+ +P + R KIL++ ++ + L VD+ KVA +T
Sbjct: 429 VDRPDVAGRVKILQVHSR---GKALGKDVDFDKVARRT 463
Score = 117 (46.2 bits), Expect = 7.4e-39, Sum P(2) = 7.4e-39
Identities = 32/114 (28%), Positives = 57/114 (50%)
Query: 761 TRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPE 820
+ E K A AG L+ L+P +D V + + P G G T +E+ +
Sbjct: 514 SEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER--LESGLY 570
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGW 872
SRSYLE ++ G A +++ FG+EN+ + S++ Q +A +M+ ++G+
Sbjct: 571 SRSYLENQMAVALGGRVAEEVI--FGDENVTTGASNDFMQVSRVARQMIERFGF 622
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 407 (148.3 bits), Expect = 2.4e-38, Sum P(2) = 2.4e-38
Identities = 106/317 (33%), Positives = 174/317 (54%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ +D A + ++E+ EVV FL++P F E+GAR P+GVL+VG GTGKT LA A+A E
Sbjct: 159 VRFRDVAGADEEKQELVEVVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGE 218
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTK 571
A VP ++ + ++VG AS VR+LF+ A+ AP IIF+++ D RG +
Sbjct: 219 AGVPFFSISGSDF-VEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGG 277
Query: 572 QQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER 631
+ E +NQLLVE+DGF +G++++A T +D AL RPGR DR + +P + R
Sbjct: 278 HDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPDVNGR 337
Query: 632 EKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELK--LVPVALEGSAFRSKFLDTDE 689
E +L++ A+ +E I+L R +A +T +L+ L AL + K +D +
Sbjct: 338 EAVLKVHARNKPLDENINL---RAIATRTPGFSGADLENLLNEAALVAARQDKKKIDMSD 394
Query: 690 LMSYCGWFATFSGVVPKWFRKTKIVKKISRMLV-----DH--LGLTLTKEDLQNVVDLME 742
+ AT V+ +K++++ + R +V H +G+ L + D+ + V ++
Sbjct: 395 IDE-----AT-DRVIAGPAKKSRVISEKERNIVAFHEAGHTVIGVVLDEADVVHKVTIV- 447
Query: 743 PYGQISNGIELLTPPLD 759
P GQ + G ++ P D
Sbjct: 448 PRGQ-AGGYAVMLPKED 463
Score = 76 (31.8 bits), Expect = 2.4e-38, Sum P(2) = 2.4e-38
Identities = 42/188 (22%), Positives = 71/188 (37%)
Query: 773 AGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFC 832
AG +I ++L D V + + P G G + E M+ PE L K+
Sbjct: 426 AGHTVIGVVLDEADVVHKVTIVPRGQAG-GYAVMLPKEDRYFMT-KPE----LLDKITGL 479
Query: 833 FGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGW----GPDDXXXXXXXXX--- 885
G A +++ FGE + + ++ ++A IA RMV ++G GP
Sbjct: 480 LGGRVAEEIV--FGEVSTGAHNDFQRATGIARRMVTEFGMSDKLGPMQFGSSQGGQVFLG 537
Query: 886 ----XXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTG 941
HE +M +++ + Y +AK++L NR E L
Sbjct: 538 RDFHSEQNYSDAIAHEIDM--EMQTIMKECYARAKQILTDNRDKLDLIAKTLLEVETLDA 595
Query: 942 KDLERLMD 949
+ + L D
Sbjct: 596 EQINHLCD 603
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 394 (143.8 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 92/250 (36%), Positives = 141/250 (56%)
Query: 443 RMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKT 502
++ + P I + A V+ ++E+ EVV FL++ FQ +GAR P+G+L++G GTGKT
Sbjct: 147 KLFNMDKPTITFANVAGVDEAKQEVGEVVEFLKSREKFQALGARIPKGILLIGPPGTGKT 206
Query: 503 SLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAG 562
LA AIA EA VP ++ E ++VG AS VR+LF A+ AP IIF+++ D
Sbjct: 207 LLAKAIAGEAGVPFFSISGSEF-VEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGR 265
Query: 563 VRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFN 622
RG + + E +NQ+LVE+DGF+ V+++A T +D AL RPGR DR
Sbjct: 266 QRGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVV 325
Query: 623 LQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELK--LVPVALEGSAF 680
L KP + RE IL+I A+ + L D V+ +A++T +L L A+ +
Sbjct: 326 LDKPDITGREAILKIHAK---GKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARK 382
Query: 681 RSKFLDTDEL 690
K ++T++L
Sbjct: 383 NRKVVETEDL 392
Score = 81 (33.6 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 51/217 (23%), Positives = 86/217 (39%)
Query: 739 DLMEPYGQISNGIELLTPPLDWTRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAW 798
DL E ++ G E + + T+E ++ A G GL+ L+ D V + +
Sbjct: 391 DLEESIDRVIAGPERKSRRIS-TQEKEVT-AYHETGHGLVLRLVQGADPVHKISIVARGM 448
Query: 799 EGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQ 858
+G T+ E M+ RS + + Y A +L F E + +S ++++
Sbjct: 449 T-LGHTRQLPNEDRYLMT-----RSQFKAMMAGLLAGYVAEELT--FKELSTGASDDLRR 500
Query: 859 AQEIATRMVLQYGW----GPDDXXXXXXXXXXXXXXXXXXXHEYEMATKV-EKVYDL--- 910
A +IA +MV YG GP + ++A + E+V L
Sbjct: 501 ATDIAHKMVTSYGMSDKLGPRTFGNKEEMVFLGREISEQKDYGEKVADMIDEEVRGLIEE 560
Query: 911 AYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERL 947
A+ KAK +L +N+ E L G +LE L
Sbjct: 561 AHQKAKTILTENKNRLKFIAEKLFEKETLEGAELENL 597
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 366 (133.9 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 73/182 (40%), Positives = 113/182 (62%)
Query: 456 DFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVP 515
D A + +E++ E+V +L++PS FQ++G + P GVL+VG GTGKT LA AIA EA+VP
Sbjct: 157 DVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVP 216
Query: 516 VVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDH 575
+ + ++VG AS VR++F+ A+ +P IIF+++ D RG + +
Sbjct: 217 FFTISGSDF-VEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGHDER 275
Query: 576 ESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKIL 635
E +NQ+LVE+DGFE +G++++A T +D AL RPGR DR + P RE+IL
Sbjct: 276 EQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQIL 335
Query: 636 RI 637
++
Sbjct: 336 KV 337
Score = 113 (44.8 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 56/248 (22%), Positives = 102/248 (41%)
Query: 721 LVDHLGLTLTKEDLQNV--VDLMEPYGQISNGIELLTPPLDWTRETKLPHAVWAAGRGLI 778
LV+ L + + +NV V+ +I G E + + + E K A AG ++
Sbjct: 368 LVNEAALFAARGNKRNVSMVEFELAKDKIMMGAERRSMVM--SEEIKESTAYHEAGHAVV 425
Query: 779 ALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCFGSYAA 838
L+P D V + + P +G T + SMS + +LE + +G A
Sbjct: 426 GRLVPEHDPVYKVSIIPRG-RALGVTMYLPEQDRVSMS-----KQHLESMISSLYGGRLA 479
Query: 839 AQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGW----GP----DDXXXXXXXXXXXX 888
+L+ +G+E + + S++I++A EIA +MV Q+G+ GP +D
Sbjct: 480 EELI--YGKEKVSTGASNDIERATEIARKMVTQWGFSEKLGPMLYAEDEGEVFLGRSVTQ 537
Query: 889 XXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLM 948
+ +V ++ D Y +A++++ N YE + ++ LM
Sbjct: 538 TKHMSDDTAKLIDDEVRQIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQIDDLM 597
Query: 949 DSNGGIRE 956
IRE
Sbjct: 598 ARKPVIRE 605
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 366 (133.9 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 73/182 (40%), Positives = 113/182 (62%)
Query: 456 DFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVP 515
D A + +E++ E+V +L++PS FQ++G + P GVL+VG GTGKT LA AIA EA+VP
Sbjct: 157 DVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVP 216
Query: 516 VVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDH 575
+ + ++VG AS VR++F+ A+ +P IIF+++ D RG + +
Sbjct: 217 FFTISGSDF-VEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGHDER 275
Query: 576 ESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKIL 635
E +NQ+LVE+DGFE +G++++A T +D AL RPGR DR + P RE+IL
Sbjct: 276 EQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQIL 335
Query: 636 RI 637
++
Sbjct: 336 KV 337
Score = 113 (44.8 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 56/248 (22%), Positives = 102/248 (41%)
Query: 721 LVDHLGLTLTKEDLQNV--VDLMEPYGQISNGIELLTPPLDWTRETKLPHAVWAAGRGLI 778
LV+ L + + +NV V+ +I G E + + + E K A AG ++
Sbjct: 368 LVNEAALFAARGNKRNVSMVEFELAKDKIMMGAERRSMVM--SEEIKESTAYHEAGHAVV 425
Query: 779 ALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCFGSYAA 838
L+P D V + + P +G T + SMS + +LE + +G A
Sbjct: 426 GRLVPEHDPVYKVSIIPRG-RALGVTMYLPEQDRVSMS-----KQHLESMISSLYGGRLA 479
Query: 839 AQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGW----GP----DDXXXXXXXXXXXX 888
+L+ +G+E + + S++I++A EIA +MV Q+G+ GP +D
Sbjct: 480 EELI--YGKEKVSTGASNDIERATEIARKMVTQWGFSEKLGPMLYAEDEGEVFLGRSVTQ 537
Query: 889 XXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLM 948
+ +V ++ D Y +A++++ N YE + ++ LM
Sbjct: 538 TKHMSDDTAKLIDDEVRQIIDRNYERARQIIMDNMDIMHAMKDALMKYETIDAGQIDDLM 597
Query: 949 DSNGGIRE 956
IRE
Sbjct: 598 ARKPVIRE 605
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 372 (136.0 bits), Expect = 9.1e-37, Sum P(2) = 9.1e-37
Identities = 82/209 (39%), Positives = 121/209 (57%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ D A +E +EE+ E+V FL++ F ++G + P+G L++G GTGKT LA AIA E
Sbjct: 155 VTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTK 571
A VP ++ + ++VG AS VR++F+ + AP IIFV++ D RG +
Sbjct: 215 ANVPFFSISGSDF-VEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGG 273
Query: 572 QQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER 631
+ E +NQLLVE+DGFE +GVV++A T +D AL RPGR DR + P + R
Sbjct: 274 NDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGR 333
Query: 632 EKILRIAAQETMDEELIDLVDWRKVAEKT 660
EKI+ + A++ L VD R +A T
Sbjct: 334 EKIIAVHAKKV---PLAPDVDLRVIARGT 359
Score = 99 (39.9 bits), Expect = 9.1e-37, Sum P(2) = 9.1e-37
Identities = 40/187 (21%), Positives = 74/187 (39%)
Query: 773 AGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFC 832
AG ++A P D + + P G + + + +S +R + L
Sbjct: 422 AGHAVVAFHNPASDPIHKATIIP---RGRSLGLVMRLPETDRVS---HTREKMLADLTVA 475
Query: 833 FGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGPDDXXXXXXXXXXXXXXXX 892
G AA +L+ + + +SS+IKQA ++A MV++ WG D
Sbjct: 476 MGGRAAEELIFGYNKVTSGASSDIKQATDLAKSMVMK--WGMSDSVGPLYHSDEAHERIS 533
Query: 893 XXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERL----- 947
+ +V+ + A +AK++L K+ +E LTG D+ +
Sbjct: 534 TNLANL-IDDEVKSIVSTALAEAKDVLTKHSDALHAIAANLLEFETLTGDDIADIIAGKK 592
Query: 948 MDSNGGI 954
++ +GGI
Sbjct: 593 LEKDGGI 599
Score = 38 (18.4 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 808 KAEKEGSMSGNPESRS 823
K EK+G +S P RS
Sbjct: 592 KLEKDGGISTRPLKRS 607
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 372 (136.0 bits), Expect = 9.1e-37, Sum P(2) = 9.1e-37
Identities = 82/209 (39%), Positives = 121/209 (57%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ D A +E +EE+ E+V FL++ F ++G + P+G L++G GTGKT LA AIA E
Sbjct: 155 VTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTK 571
A VP ++ + ++VG AS VR++F+ + AP IIFV++ D RG +
Sbjct: 215 ANVPFFSISGSDF-VEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGG 273
Query: 572 QQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER 631
+ E +NQLLVE+DGFE +GVV++A T +D AL RPGR DR + P + R
Sbjct: 274 NDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGR 333
Query: 632 EKILRIAAQETMDEELIDLVDWRKVAEKT 660
EKI+ + A++ L VD R +A T
Sbjct: 334 EKIIAVHAKKV---PLAPDVDLRVIARGT 359
Score = 99 (39.9 bits), Expect = 9.1e-37, Sum P(2) = 9.1e-37
Identities = 40/187 (21%), Positives = 74/187 (39%)
Query: 773 AGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFC 832
AG ++A P D + + P G + + + +S +R + L
Sbjct: 422 AGHAVVAFHNPASDPIHKATIIP---RGRSLGLVMRLPETDRVS---HTREKMLADLTVA 475
Query: 833 FGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGPDDXXXXXXXXXXXXXXXX 892
G AA +L+ + + +SS+IKQA ++A MV++ WG D
Sbjct: 476 MGGRAAEELIFGYNKVTSGASSDIKQATDLAKSMVMK--WGMSDSVGPLYHSDEAHERIS 533
Query: 893 XXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERL----- 947
+ +V+ + A +AK++L K+ +E LTG D+ +
Sbjct: 534 TNLANL-IDDEVKSIVSTALAEAKDVLTKHSDALHAIAANLLEFETLTGDDIADIIAGKK 592
Query: 948 MDSNGGI 954
++ +GGI
Sbjct: 593 LEKDGGI 599
Score = 38 (18.4 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 808 KAEKEGSMSGNPESRS 823
K EK+G +S P RS
Sbjct: 592 KLEKDGGISTRPLKRS 607
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 376 (137.4 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
Identities = 78/199 (39%), Positives = 120/199 (60%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ D A +E+ + E+ E+V +L++P FQ +G + P+GVL+VG GTGKT LA A+A E
Sbjct: 172 VTFDDVAGMENPKMELKEIVDYLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGE 231
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTK 571
A V +++ A + ++VG A VR+LF TA+ AP IIF+++ D RG +
Sbjct: 232 ADVTFLSISASQF-IEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSRGAGLGGG 290
Query: 572 QQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER 631
+ E +NQLL E+DGF+ D V++MA T +D AL RPGR DR + +P +R
Sbjct: 291 HDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRDR 350
Query: 632 EKILRIAAQETMDEELIDL 650
EKIL + ++ ++ +DL
Sbjct: 351 EKILHVHTRKIPLDKDVDL 369
Score = 91 (37.1 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
Identities = 32/116 (27%), Positives = 54/116 (46%)
Query: 761 TRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPE 820
T + K A AG ++A LLP D V + + P + +G +T+ E P
Sbjct: 426 TEQEKRITAYHEAGHTIVAKLLPGTDPVHKVTIIPRG-QALG---VTQQLPEDDRYHYP- 480
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGPDD 876
+SYL +L G A + + FG+ + + +++K ++A +MV Q WG D
Sbjct: 481 -KSYLMNRLSVALGGRQAERAV--FGDLSTGAQNDLKMVNDLAEKMVCQ--WGMSD 531
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 373 (136.4 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 74/195 (37%), Positives = 116/195 (59%)
Query: 443 RMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKT 502
R+ ++ + D A ++ +EE+ E+V FL+ P FQ++G + P+G L++G GTGKT
Sbjct: 145 RLLSDRSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKT 204
Query: 503 SLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAG 562
LA AIA EA+VP ++ + ++VG AS VR++F+ + AP +IF+++ D
Sbjct: 205 LLAKAIAGEAKVPFFSISGSDF-VEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGR 263
Query: 563 VRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFN 622
RG + E +NQLLVE+DGFE +GV+++A T +D AL RPGR DR
Sbjct: 264 HRGVGFGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQIT 323
Query: 623 LQKPTQSEREKILRI 637
+ P + R+KIL +
Sbjct: 324 ISIPDIAGRQKILEV 338
Score = 95 (38.5 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 46/201 (22%), Positives = 83/201 (41%)
Query: 763 ETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESR 822
E KL A AG + +L L D + + P G + + + +S +R
Sbjct: 411 EEKLLTAYHEAGHAITSLKLEASDPIHKATIIP---RGRALGLVMRLPEHDRVSF---TR 464
Query: 823 SYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDXXXX 880
+ + L+ G AA Q++ FG++ S +S+IKQA +A MV + WG +
Sbjct: 465 AKMHADLIVAMGGRAAEQVI--FGDDKTTSGAASDIKQATHLARSMVTK--WGMSEKVGP 520
Query: 881 XXXXXXXXXXXXXXXHEYE--MATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEI 938
E + ++V+++ A +A ++L +N YE
Sbjct: 521 LLYGEQNDPNNHILSIEMSNLIDSEVKQLVTDALKEATKILNENIESLHRVAKALLEYET 580
Query: 939 LTGKDLERLMDSNGGIREKEP 959
LTG++L L++ ++ K P
Sbjct: 581 LTGQELSDLLEGKSFLK-KAP 600
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 368 (134.6 bits), Expect = 3.1e-36, Sum P(2) = 3.1e-36
Identities = 74/182 (40%), Positives = 113/182 (62%)
Query: 456 DFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVP 515
D A + +EE+ E+V +L++P+ FQ++G R P GVL+VG GTGKT LA AIA E++VP
Sbjct: 158 DVAGCDEAKEEVKELVDYLRDPTKFQKLGGRIPTGVLMVGPPGTGKTLLAKAIAGESKVP 217
Query: 516 VVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDH 575
+ + ++VG AS VR++F+ A+ AP IIF+++ D RG + +
Sbjct: 218 FFTISGSDF-VEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQRGAGLGGGHDER 276
Query: 576 ESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKIL 635
E +NQ+LVE+DGFE +G++++A T +D AL RPGR DR + P RE+IL
Sbjct: 277 EQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQVVVGLPDVRGREQIL 336
Query: 636 RI 637
++
Sbjct: 337 KV 338
Score = 101 (40.6 bits), Expect = 3.1e-36, Sum P(2) = 3.1e-36
Identities = 46/187 (24%), Positives = 77/187 (41%)
Query: 773 AGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFC 832
AG ++ L+P D V + + P +G T + ++S +SR LE ++
Sbjct: 421 AGHAIVGCLVPEHDPVHKVTIIPRG-RALGVTFFLP--EADAIS---QSRRKLESQISVA 474
Query: 833 FGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGW----GPDDXXXXXXXXXX 886
+G A +L+ +G E + + S +IK A IA MV Q+G+ GP
Sbjct: 475 YGGRLAEELI--YGTEKVSTGASQDIKYATSIARNMVTQWGFSDKLGPLLYAEEEGEVFL 532
Query: 887 XXXXXXXXXHEYEMATKVE---KVY-DLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGK 942
E AT ++ K + D Y +AK++LQ N YE +
Sbjct: 533 GRSMGKAKAMSDETATLIDTEVKAFIDKNYSRAKQILQDNVDILHSMKDALMKYETIDSL 592
Query: 943 DLERLMD 949
++ LM+
Sbjct: 593 QIDDLMN 599
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 369 (135.0 bits), Expect = 8.6e-36, Sum P(2) = 8.6e-36
Identities = 79/214 (36%), Positives = 122/214 (57%)
Query: 426 IKRKKKAGIDPIKNAFERMKRV--KNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEM 483
+KR + G I + R K + + D A ++ +EE+ E+V FL++ FQ++
Sbjct: 125 LKRMQIGGNRTINFSKSRAKLMTENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKL 184
Query: 484 GARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQT 543
G + P+G L++G GTGKT LA AIA EA VP ++ + ++VG AS VR++F+
Sbjct: 185 GGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDF-VEMFVGVGASRVRDMFEQ 243
Query: 544 ARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRN 603
+ AP IIF+++ D RG + + E +NQLLVE+DGFE +GV+++A T
Sbjct: 244 GKKNAPCIIFIDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNR 303
Query: 604 IKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI 637
+D AL RPGR DR + P + REKI+ +
Sbjct: 304 PDVLDSALLRPGRFDRQVTISIPDINGREKIINV 337
Score = 93 (37.8 bits), Expect = 8.6e-36, Sum P(2) = 8.6e-36
Identities = 44/205 (21%), Positives = 80/205 (39%)
Query: 761 TRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPE 820
T E + A AG +IA D + + P G + + + +S
Sbjct: 408 TEEERRLTAYHEAGHAIIAFFTEASDPIHKATIIP---RGRSLGLVMRLPESDRVS---H 461
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGPDDXXXX 880
+R + L G AA +L+ + + +SS+IKQA ++A MV++ WG D
Sbjct: 462 TREKMIADLTVAMGGRAAEELIFGYHKVTSGASSDIKQATDLAKAMVMK--WGMSDKVGP 519
Query: 881 XXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILT 940
+ +V+ + A +AK +L ++ +E LT
Sbjct: 520 LYHNDDKNDTISNNLANL-IDEEVKLIVTSALERAKSLLNEHLESLHIVAKNLLEFETLT 578
Query: 941 GKDLERLMDSNGGIREKEPFFLSKV 965
G+D++ ++ NG K+ S+V
Sbjct: 579 GEDIKNII--NGKELTKDDIEESQV 601
Score = 39 (18.8 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
Identities = 6/12 (50%), Positives = 11/12 (91%)
Query: 728 TLTKEDLQNVVD 739
TLT ED++N+++
Sbjct: 576 TLTGEDIKNIIN 587
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 369 (135.0 bits), Expect = 8.6e-36, Sum P(2) = 8.6e-36
Identities = 79/214 (36%), Positives = 122/214 (57%)
Query: 426 IKRKKKAGIDPIKNAFERMKRV--KNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEM 483
+KR + G I + R K + + D A ++ +EE+ E+V FL++ FQ++
Sbjct: 125 LKRMQIGGNRTINFSKSRAKLMTENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKL 184
Query: 484 GARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQT 543
G + P+G L++G GTGKT LA AIA EA VP ++ + ++VG AS VR++F+
Sbjct: 185 GGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDF-VEMFVGVGASRVRDMFEQ 243
Query: 544 ARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRN 603
+ AP IIF+++ D RG + + E +NQLLVE+DGFE +GV+++A T
Sbjct: 244 GKKNAPCIIFIDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNR 303
Query: 604 IKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI 637
+D AL RPGR DR + P + REKI+ +
Sbjct: 304 PDVLDSALLRPGRFDRQVTISIPDINGREKIINV 337
Score = 93 (37.8 bits), Expect = 8.6e-36, Sum P(2) = 8.6e-36
Identities = 44/205 (21%), Positives = 80/205 (39%)
Query: 761 TRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPE 820
T E + A AG +IA D + + P G + + + +S
Sbjct: 408 TEEERRLTAYHEAGHAIIAFFTEASDPIHKATIIP---RGRSLGLVMRLPESDRVS---H 461
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGPDDXXXX 880
+R + L G AA +L+ + + +SS+IKQA ++A MV++ WG D
Sbjct: 462 TREKMIADLTVAMGGRAAEELIFGYHKVTSGASSDIKQATDLAKAMVMK--WGMSDKVGP 519
Query: 881 XXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILT 940
+ +V+ + A +AK +L ++ +E LT
Sbjct: 520 LYHNDDKNDTISNNLANL-IDEEVKLIVTSALERAKSLLNEHLESLHIVAKNLLEFETLT 578
Query: 941 GKDLERLMDSNGGIREKEPFFLSKV 965
G+D++ ++ NG K+ S+V
Sbjct: 579 GEDIKNII--NGKELTKDDIEESQV 601
Score = 39 (18.8 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
Identities = 6/12 (50%), Positives = 11/12 (91%)
Query: 728 TLTKEDLQNVVD 739
TLT ED++N+++
Sbjct: 576 TLTGEDIKNIIN 587
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 375 (137.1 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 77/186 (41%), Positives = 112/186 (60%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ D A V+ +EE+ E+V FL++P FQ +G + P GVL+VG GTGKT LA A+A E
Sbjct: 153 VTFDDVAGVDEAKEEVKELVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGE 212
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTK 571
A+VP + + ++VG AS VR++F A+ AP IIF+++ D RG +
Sbjct: 213 AKVPFFTISGSDF-VEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHRGAGLGGG 271
Query: 572 QQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER 631
+ E +NQLLVE+DGFE ++G+++MA T +D AL RPGR DR + P R
Sbjct: 272 HDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQVVVPLPDIKGR 331
Query: 632 EKILRI 637
E IL++
Sbjct: 332 EYILKV 337
Score = 84 (34.6 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 43/196 (21%), Positives = 80/196 (40%)
Query: 763 ETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESR 822
E KL A AG ++ L + D V + + P +G T SM+ +
Sbjct: 411 EKKLT-AYHEAGHAIVGLHMLEHDPVYKVTIIPRG-RALGVTMFLPEHDRYSMT-----K 463
Query: 823 SYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGW----GP-- 874
LE +L FG A +++ FG + + + S++I++A EIA MV ++G GP
Sbjct: 464 RRLECQLAGLFGGRIAEEII--FGPDLVTTGASNDIEKATEIARNMVTKWGLSQKLGPLT 521
Query: 875 --DDXXXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXX 932
++ E+ ++V ++ D AY AK+ L+++
Sbjct: 522 YREEEGEVFLGRSVTQRKDISDATNKEIDSEVRRIVDTAYTTAKQTLEEHIEQLHLMAKA 581
Query: 933 XXXYEILTGKDLERLM 948
YE + ++ ++
Sbjct: 582 LIKYETIGEAQIKEIL 597
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 405 (147.6 bits), Expect = 3.6e-35, Sum P(2) = 3.6e-35
Identities = 88/210 (41%), Positives = 124/210 (59%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
I D A V+ +EE+ E+V FL+NP + +GAR PRGVL+VG GTGKT LA A+A E
Sbjct: 322 ITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 381
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVR-GQFIHT 570
A VP ++ A E L+VG AS VR+LF A+ AP IIF+++ D A R G+F
Sbjct: 382 AEVPFISCSASEF-VELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMG 440
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
+ E +NQLL E+DGF+ V+++ T +D AL+RPGR DR+ ++ P +
Sbjct: 441 SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIG 500
Query: 631 REKILRIAAQETMDEELIDLVDWRKVAEKT 660
RE ILR+ + + L D V+ +A T
Sbjct: 501 RESILRVHVSKK-ELPLGDDVNLGSIASMT 529
Score = 57 (25.1 bits), Expect = 3.6e-35, Sum P(2) = 3.6e-35
Identities = 36/155 (23%), Positives = 67/155 (43%)
Query: 721 LVDHLGLTLTKEDLQNV--VDLMEPYGQISNGIELLTPPLDWTRETKLP-HAVWAAGRGL 777
LV+ L +++ NV +D ++ + GIE + L + + H A G
Sbjct: 540 LVNEAALLAGRKNKTNVEKIDFIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGT 599
Query: 778 -IALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCFGSY 836
+A LL V+ L + P +G T I ++ + E L +LV G
Sbjct: 600 AVANLLTGQPRVEKLSILPRTGGALGFTYIPPTSEDRYLLFIDE----LLGRLVTLLGGR 655
Query: 837 AAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYG 871
AA +++ G + + +I++A ++A + V +YG
Sbjct: 656 AAEEVVYS-GRISTGAFDDIRRATDMAYKAVAEYG 689
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 372 (136.0 bits), Expect = 5.8e-35, Sum P(2) = 5.8e-35
Identities = 75/182 (41%), Positives = 113/182 (62%)
Query: 456 DFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVP 515
D A + +EE+ E+V +L+ PS FQ++G + P+GVL+VG GTGKT LA AIA EA+VP
Sbjct: 153 DVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVP 212
Query: 516 VVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDH 575
+ + ++VG AS VR++F+ A+ AP IIF+++ D RG + +
Sbjct: 213 FFTISGSDF-VEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDER 271
Query: 576 ESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKIL 635
E +NQ+LVE+DGFE +G++++A T +D AL RPGR DR + P RE+IL
Sbjct: 272 EQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQIL 331
Query: 636 RI 637
++
Sbjct: 332 KV 333
Score = 84 (34.6 bits), Expect = 5.8e-35, Sum P(2) = 5.8e-35
Identities = 45/198 (22%), Positives = 76/198 (38%)
Query: 761 TRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPE 820
T K A AG +I L+P D V + + P +G T EG
Sbjct: 404 TEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRG-RALGVTFFLP---EGDAIS--A 457
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGW----GP 874
SR LE ++ +G A +++ +G E++ + S++IK A +A MV Q+G+ GP
Sbjct: 458 SRQKLESQISTLYGGRLAEEII--YGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGP 515
Query: 875 DDXXXXXXXXXXXXXXXXXXXHEYEMAT----KVEKVYDLAYYKAKEMLQKNRXXXXXXX 930
E A +V+ + + Y +A+++L N
Sbjct: 516 LLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMK 575
Query: 931 XXXXXYEILTGKDLERLM 948
YE + ++ LM
Sbjct: 576 DALMKYETIDAPQIDDLM 593
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 373 (136.4 bits), Expect = 9.0e-35, Sum P(2) = 9.0e-35
Identities = 75/182 (41%), Positives = 113/182 (62%)
Query: 456 DFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVP 515
D A + +E++ E+V +L+ PS FQ++G R P G+L+VG+ GTGKT LA AIA EA+VP
Sbjct: 155 DVAGCDEAKEDVAELVDYLREPSRFQKLGGRIPSGILLVGQPGTGKTLLAKAIAGEAKVP 214
Query: 516 VVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDH 575
+ + ++VG AS VR++F+ A+ AP IIF+++ D RG + +
Sbjct: 215 FFTISGSDF-VEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGMGGGHDER 273
Query: 576 ESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKIL 635
E +NQ+LVE+DGFE +GV+++A T +D AL RPGR DR + P RE+IL
Sbjct: 274 EQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVTVGLPDIRGREQIL 333
Query: 636 RI 637
++
Sbjct: 334 KV 335
Score = 82 (33.9 bits), Expect = 9.0e-35, Sum P(2) = 9.0e-35
Identities = 35/184 (19%), Positives = 73/184 (39%)
Query: 773 AGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFC 832
AG +I L+P+ D V + + P +G T + S S+ +LE +
Sbjct: 418 AGHAIIGRLVPDHDPVYKVSIIPRG-RALGVTMYLPEQDRFS-----HSKQHLESNISSL 471
Query: 833 FGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYG----WGP----DDXXXXXXXX 884
+G A +++ + + +S++I++A IA +MV Q+G GP ++
Sbjct: 472 YGGRVAEEVIYGSDKVSTGASNDIERATNIARKMVTQWGLSEKMGPMLFAEEEGEVFLGR 531
Query: 885 XXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDL 944
+ +++ V Y +A+++++ N YE + +
Sbjct: 532 TSAKSLHMSDETAKTIDEEIKSVISRNYQRAEDLIKANMDVLHAMKDCLMKYETIDALQI 591
Query: 945 ERLM 948
+ LM
Sbjct: 592 DDLM 595
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 358 (131.1 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 76/196 (38%), Positives = 115/196 (58%)
Query: 456 DFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVP 515
D V+ + E+ E+V +L++P F +G + P+GVL+VG GTGKT LA AIA EA VP
Sbjct: 228 DVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVP 287
Query: 516 VVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDH 575
+ E E ++VG A VR+LF A+ +P IIF+++ D G R QQ
Sbjct: 288 FFSCSGSEFEE-MFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNP---KDQQYM 343
Query: 576 ESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKIL 635
+ +NQ+LVELDGF++ +G++++A T + +D+AL RPGR DR + P R +IL
Sbjct: 344 KMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIL 403
Query: 636 RIAAQETMDEELIDLV 651
+ + E +DL+
Sbjct: 404 ESHMSKVLKAEDVDLM 419
Score = 100 (40.3 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 35/147 (23%), Positives = 64/147 (43%)
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDXX 878
SR + +L C G A +L+ FGE + S SS+++QA ++A MV ++G +
Sbjct: 530 SRKQMLARLDVCMGGRVAEELI--FGESEVTSGASSDLEQATKLARAMVTKFGMSKEVGL 587
Query: 879 XXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEI 938
E ++V+++ + AY AK +L +E
Sbjct: 588 VAHNYDDNGKSMSTETRLLIE--SEVKQLLEKAYNNAKTILTVYNKELHALANALLQHET 645
Query: 939 LTGKDLERLM-DSNGGIREKEPFFLSK 964
L+GK ++ L+ D N + +K ++K
Sbjct: 646 LSGKQIKELLTDLNSPLLQKRQEVVTK 672
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 401 (146.2 bits), Expect = 1.7e-34, Sum P(3) = 1.7e-34
Identities = 86/210 (40%), Positives = 124/210 (59%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
I D A V+ +EE+ E+V FL+NP + +GAR PRGVL+VG GTGKT LA A+A E
Sbjct: 326 ITFADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 385
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVR-GQFIHT 570
+ VP ++ A E L+VG AS VR+LF A+ AP IIF+++ D A R G+F
Sbjct: 386 SDVPFISCSASEF-VELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMV 444
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
+ E +NQLL E+DGF+ V+++ T +D AL+RPGR DR+ ++ P +
Sbjct: 445 SNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVG 504
Query: 631 REKILRIAAQETMDEELIDLVDWRKVAEKT 660
RE IL++ + + L D V+ +A T
Sbjct: 505 RESILKVHVSKK-ELPLGDDVNLASIASMT 533
Score = 60 (26.2 bits), Expect = 1.7e-34, Sum P(3) = 1.7e-34
Identities = 36/155 (23%), Positives = 66/155 (42%)
Query: 721 LVDHLGLTLTKEDLQNV--VDLMEPYGQISNGIELLTPPLDWTRETKLP-HAVWAAGRGL 777
LV+ L ++ V +D + + GIE T L + + + H A G
Sbjct: 544 LVNEAALLAGRKSKMTVDKIDFIHAVERSIAGIEKKTARLKGSEKAVVARHEAGHAVVGT 603
Query: 778 -IALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCFGSY 836
+A LL V+ L + P + +G T I ++ + E L +LV G
Sbjct: 604 AVASLLSGQSRVEKLSILPRSGGALGFTYIPPTHEDRYLLFIDE----LHGRLVTLLGGR 659
Query: 837 AAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYG 871
AA +++ G + + +I++A ++A + V +YG
Sbjct: 660 AAEEVVYS-GRISTGALDDIRRATDMAYKAVAEYG 693
Score = 38 (18.4 bits), Expect = 1.7e-34, Sum P(3) = 1.7e-34
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 212 YLSLKGDDKEFYVDIKEFEVLFE--DFGGFDE 241
+LS +D+ V++ F VLF+ D G E
Sbjct: 181 FLSKVNNDEVQKVEVDGFHVLFKLKDDGNLQE 212
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 375 (137.1 bits), Expect = 2.6e-34, Sum P(2) = 2.6e-34
Identities = 105/271 (38%), Positives = 147/271 (54%)
Query: 455 KDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
KD + ++E+ EVV +L+NPS F +G + P+G+L+ G GTGKT LA AIA EA V
Sbjct: 362 KDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGV 421
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI-HTKQQ 573
P E E ++VG A VR LFQ A+ AP IIF+++ D R Q+ HTK+
Sbjct: 422 PFFYRAGSEFEE-MFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKT 480
Query: 574 DHESFINQLLVELDGFEKQDGVVLMATTRNIKQI-DEALQRPGRMDRIFNLQKPTQSERE 632
H QLLVE+DGFE+ +G+++MA T N+ I D AL RPGR DR + P RE
Sbjct: 481 LH-----QLLVEMDGFEQNEGIIVMAAT-NLPDILDPALTRPGRFDRHIVVPSPDVRGRE 534
Query: 633 KILRIAAQ-ETMDEELIDLVDWRKVAEKTALLRPIEL-KLVPVALEGSAFRSKFLDTDEL 690
+IL + Q + M E+ VD + +A T +L LV +A A ++ ++L
Sbjct: 535 EILELYLQGKPMSED----VDVKAIARGTPGFNGADLANLVNIA----AIKAAVEGAEKL 586
Query: 691 MSYCGWFATFSGVVPKWFRKTKIVKKISRML 721
S FA +V RKT V + S+ L
Sbjct: 587 SSEQLEFAK-DRIVMGTERKTMFVSEDSKKL 616
Score = 81 (33.6 bits), Expect = 2.6e-34, Sum P(2) = 2.6e-34
Identities = 30/130 (23%), Positives = 55/130 (42%)
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDXX 878
S+ L +L C G A +L+ FG +++ + SS++ QA E+A MV G
Sbjct: 664 SKRQLLARLDVCMGGRVAEELI--FGLDHITTGASSDLSQATELAQYMVSSCGMSE---- 717
Query: 879 XXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEI 938
+ + +V K+ AY + K +L+++ YE
Sbjct: 718 ---AIGPVHIKERPSSDMQSRIDAEVVKLLREAYERVKSLLKRHEKQLHTLANALLEYET 774
Query: 939 LTGKDLERLM 948
LT +D++R++
Sbjct: 775 LTAEDIKRIL 784
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 397 (144.8 bits), Expect = 7.9e-34, Sum P(2) = 7.9e-34
Identities = 113/348 (32%), Positives = 182/348 (52%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ D A ++ ++EE+ E+V FL+NP + E+GAR P+GVL+ G+ GTGKT LA AIA E
Sbjct: 155 VTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTK 571
A VP ++ + ++VG AS VR+LF+ A+ AP I+F+++ D RG +
Sbjct: 215 AGVPFFSISGSDF-VEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGG 273
Query: 572 QQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER 631
+ E +NQLLVE+DGF +G++++A T +D AL RPGR DR + P + R
Sbjct: 274 HDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGR 333
Query: 632 EKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIEL-KLVPVALEGSAFRSKFLDTDEL 690
++IL++ + + L D VD +A +T +L +V A +A R+K + E
Sbjct: 334 KEILKVHVK---GKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEE 390
Query: 691 MSYCGWFATFSGVVPKWFRKTKIVKKISRMLVDH-------LGLTLTKEDLQNVVDLMEP 743
M V+ +K+K++ + + LV + +G L D + + ++ P
Sbjct: 391 ME-----EAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPVHKISII-P 444
Query: 744 YGQISNGIELLTPPLDWTRETK---LPH-AVWAAGRGLIALLLPNFDT 787
G+ + G LL P D + TK L + GR AL+L + T
Sbjct: 445 RGR-AGGYTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVLEDIST 491
Score = 134 (52.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 55/225 (24%), Positives = 96/225 (42%)
Query: 736 NVVDLMEPYGQISNGIELLTPPLDWTRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEP 795
N+ ++ E ++ G E + + RE +L A AG ++ LLP+ D V + + P
Sbjct: 387 NMEEMEEAIERVIAGPEKKSKVIS-EREKRLV-AYHEAGHAMVGYLLPHTDPVHKISIIP 444
Query: 796 CAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSE 855
G G T + E M+ +S L ++ G A L+L + + + ++
Sbjct: 445 RGRAG-GYTLLLPEEDRSYMT-----KSQLLDEITMLLGGRVAEALVLE--DISTGARND 496
Query: 856 IKQAQEIATRMVLQYGW----GPDDXXXXXXXXXXXXXXXXXXXHEYEMA----TKVEKV 907
+++A E A RMV++YG GP + E+A +V K+
Sbjct: 497 LERATETARRMVMEYGMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRKI 556
Query: 908 YDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLMDSNG 952
D Y +A+E+L+KN E + G++ E+LM NG
Sbjct: 557 IDSCYSRAEEILKKNINVLHLVATKLMEVETMEGEEFEKLMKENG 601
Score = 43 (20.2 bits), Expect = 7.9e-34, Sum P(2) = 7.9e-34
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 176 YNEDKSRWEMDPVA-VPYAVSNKIVESARIRHDWGAMYLSLKG--DDKEFYVDIKEFEVL 232
Y+E S E VA V I E + + D G + + +G +D E Y D+K+ V
Sbjct: 37 YDEFYSLLEKGQVASVAIQTDRTINEISGVLRD-GTRFKT-RGPLEDAELYKDLKKMNVT 94
Query: 233 FE 234
E
Sbjct: 95 VE 96
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 397 (144.8 bits), Expect = 7.9e-34, Sum P(2) = 7.9e-34
Identities = 113/348 (32%), Positives = 182/348 (52%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ D A ++ ++EE+ E+V FL+NP + E+GAR P+GVL+ G+ GTGKT LA AIA E
Sbjct: 155 VTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTK 571
A VP ++ + ++VG AS VR+LF+ A+ AP I+F+++ D RG +
Sbjct: 215 AGVPFFSISGSDF-VEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGG 273
Query: 572 QQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER 631
+ E +NQLLVE+DGF +G++++A T +D AL RPGR DR + P + R
Sbjct: 274 HDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGR 333
Query: 632 EKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIEL-KLVPVALEGSAFRSKFLDTDEL 690
++IL++ + + L D VD +A +T +L +V A +A R+K + E
Sbjct: 334 KEILKVHVK---GKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEE 390
Query: 691 MSYCGWFATFSGVVPKWFRKTKIVKKISRMLVDH-------LGLTLTKEDLQNVVDLMEP 743
M V+ +K+K++ + + LV + +G L D + + ++ P
Sbjct: 391 ME-----EAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPVHKISII-P 444
Query: 744 YGQISNGIELLTPPLDWTRETK---LPH-AVWAAGRGLIALLLPNFDT 787
G+ + G LL P D + TK L + GR AL+L + T
Sbjct: 445 RGR-AGGYTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVLEDIST 491
Score = 134 (52.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 55/225 (24%), Positives = 96/225 (42%)
Query: 736 NVVDLMEPYGQISNGIELLTPPLDWTRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEP 795
N+ ++ E ++ G E + + RE +L A AG ++ LLP+ D V + + P
Sbjct: 387 NMEEMEEAIERVIAGPEKKSKVIS-EREKRLV-AYHEAGHAMVGYLLPHTDPVHKISIIP 444
Query: 796 CAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSE 855
G G T + E M+ +S L ++ G A L+L + + + ++
Sbjct: 445 RGRAG-GYTLLLPEEDRSYMT-----KSQLLDEITMLLGGRVAEALVLE--DISTGARND 496
Query: 856 IKQAQEIATRMVLQYGW----GPDDXXXXXXXXXXXXXXXXXXXHEYEMA----TKVEKV 907
+++A E A RMV++YG GP + E+A +V K+
Sbjct: 497 LERATETARRMVMEYGMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRKI 556
Query: 908 YDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLMDSNG 952
D Y +A+E+L+KN E + G++ E+LM NG
Sbjct: 557 IDSCYSRAEEILKKNINVLHLVATKLMEVETMEGEEFEKLMKENG 601
Score = 43 (20.2 bits), Expect = 7.9e-34, Sum P(2) = 7.9e-34
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 176 YNEDKSRWEMDPVA-VPYAVSNKIVESARIRHDWGAMYLSLKG--DDKEFYVDIKEFEVL 232
Y+E S E VA V I E + + D G + + +G +D E Y D+K+ V
Sbjct: 37 YDEFYSLLEKGQVASVAIQTDRTINEISGVLRD-GTRFKT-RGPLEDAELYKDLKKMNVT 94
Query: 233 FE 234
E
Sbjct: 95 VE 96
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 370 (135.3 bits), Expect = 2.9e-33, Sum P(2) = 2.9e-33
Identities = 79/188 (42%), Positives = 110/188 (58%)
Query: 450 PPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIA 509
P D A V+ EE+ E+ FLQNPS +Q +GA+ P+GVL+ G GTGKT LA A+A
Sbjct: 158 PKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVA 217
Query: 510 AEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIH 569
EA VP + + ++VG AS VR+LF+ A+ +P IIFV++ D RG +
Sbjct: 218 GEAGVPFFTISGSDF-VEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLG 276
Query: 570 TKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQS 629
+ E +NQLLVE+DGF + GV+L+A T +D AL RPGR DR + P +
Sbjct: 277 GGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLA 336
Query: 630 EREKILRI 637
R +LR+
Sbjct: 337 GRRAVLRV 344
Score = 75 (31.5 bits), Expect = 2.9e-33, Sum P(2) = 2.9e-33
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYG 871
+RS + +LVF G AA +L+ F E + S+I+QA +IA MV ++G
Sbjct: 469 TRSEMIAQLVFAMGGRAAEELV--FREPTTGAVSDIEQATKIARSMVTEFG 517
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 344 (126.2 bits), Expect = 3.2e-33, Sum P(2) = 3.2e-33
Identities = 82/211 (38%), Positives = 116/211 (54%)
Query: 427 KRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGAR 486
K K K GI I + V+ P D E + E+ ++V FL+NP +
Sbjct: 136 KGKDKGGIMSILTSKPFKTLVERPNTTFADVMGAEEAKGELQDLVDFLRNPEKYYRRNIV 195
Query: 487 APRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARD 546
P+G+L+VG GTGKT LA ++A EARV + + E E +VG A VRELF+ AR
Sbjct: 196 MPKGILLVGPPGTGKTLLAKSLAGEARVSFITINGSEFEEA-FVGVGAKRVRELFEAARK 254
Query: 547 LAPVIIFVEDFDLFAGVRGQFIHTKQQD-HES-FINQLLVELDGFEKQDGVVLMATTRNI 604
+P I+F+++ D G R TK+ + H S +NQLLVELDGF+ ++GV++MA T
Sbjct: 255 NSPCIVFIDEIDSVGGSR-----TKRVNYHPSEALNQLLVELDGFDGREGVMVMAATNYQ 309
Query: 605 KQIDEALQRPGRMDRIFNLQKPTQSEREKIL 635
+D AL R GR DRI + P R+ I+
Sbjct: 310 DSLDTALIRSGRFDRIIQVPLPDGKARKSII 340
Score = 101 (40.6 bits), Expect = 3.2e-33, Sum P(2) = 3.2e-33
Identities = 58/244 (23%), Positives = 102/244 (41%)
Query: 721 LVDHLGLTLTKEDLQNVVDLMEPYGQISNGIELLTP-----PLDWTRETKLPHAVWAAGR 775
LV+ L TK +L + ME Q+ N E L L + E + A AG
Sbjct: 373 LVNWAALETTKHNLPEIT--ME---QLENAKENLMMGKERHSLLMSDEARKICAFHEAGH 427
Query: 776 GLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCFGS 835
L+A++ P TV + P + +G ++ EKE + ++ L ++ G
Sbjct: 428 ALVAIMTPGARTVHKATIMPRG-DALGL--VSMLEKEETFV----TKKQLIAQMDVAMGG 480
Query: 836 YAAAQLLLPFGEENLL--SSSEIKQAQEIATRMVLQYGWGPDDXXXXXXXXXXXXXXXXX 893
AA +L+L G+EN+ +SS+I++A IA MV YG
Sbjct: 481 RAAEELIL--GKENISQGASSDIQKATSIAKAMVSNYGMSEK----VGQIYIQSEKKLSS 534
Query: 894 XXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLMDSNGG 953
E + ++V+ + D +Y +A ++L+K YE L+ +++ ++ S
Sbjct: 535 AQREL-VDSEVKSLLDSSYIRATQLLKKYSKEHHLIANALLEYETLSLDEIKDIIASKSL 593
Query: 954 IREK 957
+K
Sbjct: 594 ANKK 597
Score = 39 (18.8 bits), Expect = 9.9e-27, Sum P(2) = 9.9e-27
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 630 EREKILRIAAQETMDEELIDLVDWRKVAEKTALLR 664
+ EK L A +E +D E+ L+D + T LL+
Sbjct: 527 QSEKKLSSAQRELVDSEVKSLLDSSYI-RATQLLK 560
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 374 (136.7 bits), Expect = 7.3e-33, Sum P(2) = 7.3e-33
Identities = 80/189 (42%), Positives = 111/189 (58%)
Query: 449 NPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
N + D A V+ +++ EVV FL+ P F +GAR P+GVL+VG GTGKT LA AI
Sbjct: 214 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAI 273
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A EA VP ++ E ++VG AS VR+LF+ A++ AP I+FV++ D RG I
Sbjct: 274 AGEAGVPFFSISGSEF-VEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGI 332
Query: 569 HTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+ E +NQLL E+DGFE GV+++A T +D AL RPGR DR ++ P
Sbjct: 333 GGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 392
Query: 629 SEREKILRI 637
R IL++
Sbjct: 393 KGRTDILKV 401
Score = 64 (27.6 bits), Expect = 7.3e-33, Sum P(2) = 7.3e-33
Identities = 37/184 (20%), Positives = 68/184 (36%)
Query: 774 GRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCF 833
G + L P D V + L P + G T ++ +S + L ++V
Sbjct: 484 GHAICGTLTPGHDAVQKVTLIPRG-QARGLTWFIPSDDPTLIS-----KQQLFARIVGGL 537
Query: 834 GSYAAAQLLLPFGEENLLSS--SEIKQAQEIATRMVLQYGW---GP----DDXXXXXXXX 884
G AA +++ FGE + + S+++Q +A +MV +G GP D
Sbjct: 538 GGRAAEEVI--FGESEVTTGAVSDLQQITGLAKQMVTTFGMSEIGPWSLMDSSEQSDVIM 595
Query: 885 XXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDL 944
++ T V+ + D AY A ++ NR E ++G +
Sbjct: 596 RMMARNSMSEKLANDIDTAVKTLSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEF 655
Query: 945 ERLM 948
++
Sbjct: 656 RAIL 659
Score = 41 (19.5 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 627 TQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKL 670
+ + + I+R+ A+ +M E+L + +D A KT + E+ L
Sbjct: 587 SSEQSDVIMRMMARNSMSEKLANDID---TAVKTLSDKAYEIAL 627
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 390 (142.3 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 110/308 (35%), Positives = 162/308 (52%)
Query: 456 DFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVP 515
D A ++ +EE+ EVV FL+ P F +GA+ P+GVL+VG GTGKT LA AIA EA VP
Sbjct: 173 DVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVP 232
Query: 516 VVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDH 575
++ E ++VG AS VR+LF+ A++ AP +IF+++ D RG I +
Sbjct: 233 FFSISGSEF-VEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDER 291
Query: 576 ESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKIL 635
E +NQLL E+DGFE G++++A T +D AL RPGR DR + P S R++IL
Sbjct: 292 EQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEIL 351
Query: 636 RIAAQETMDEELIDLVDWRKVAEKTALLRPIEL-KLVPVALEGSAFRSK----FLDTDEL 690
+ A+ +++L V +A +T +L L+ A +A R K L+ D+
Sbjct: 352 EVHAR---NKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDA 408
Query: 691 MSYCGWFATFSGVVPKWFRKTKIVKKISRMLVDH--LGLTLTKEDLQNVVDLMEPYGQIS 748
+ A G P K+K + I+ V H +G L D V L+ P GQ +
Sbjct: 409 VDRV--VAGMEGT-PLVDSKSK--RLIAYHEVGHAIVGTLLKDHDPVQKVTLI-PRGQ-A 461
Query: 749 NGIELLTP 756
G+ TP
Sbjct: 462 QGLTWFTP 469
Score = 41 (19.5 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 217 GDDK-EFYVDIKEFEVLFEDFGGFDE 241
G K F +D K V+F+D G DE
Sbjct: 155 GKSKARFQMDAKT-GVMFDDVAGIDE 179
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 391 (142.7 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 85/208 (40%), Positives = 126/208 (60%)
Query: 439 NAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERG 498
N+ + +R KNP + D V+S ++E+ E+V+ LQ ++++GAR PRGVL+VG G
Sbjct: 318 NSPAKKRRSKNPTVGFDDVEGVDSAKDELVEIVSCLQGSINYKKLGARLPRGVLLVGPPG 377
Query: 499 TGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFD 558
TGKT LA A+A EA VP +V A E L+VG+ A+ +R+LF AR +P IIF+++ D
Sbjct: 378 TGKTLLARAVAGEAGVPFFSVSASEF-VELFVGRGAARIRDLFNAARKNSPSIIFIDELD 436
Query: 559 LFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMD 618
G RG+ + + + +NQLL E+DGFE V+++A T + +D AL RPGR
Sbjct: 437 AVGGKRGRSFN---DERDQTLNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFS 493
Query: 619 RIFNLQKPTQSEREKILRIAAQETMDEE 646
R + +P Q R KIL I ++ EE
Sbjct: 494 RKVLVAEPDQEGRRKILAIHLRDVPLEE 521
Score = 39 (18.8 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 73 EARIRKNMKKLGNEKRFVVR 92
E RI +N + G +RF +R
Sbjct: 93 ETRIGENGRNKGKRRRFSLR 112
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 376 (137.4 bits), Expect = 3.3e-32, Sum P(2) = 3.3e-32
Identities = 81/208 (38%), Positives = 121/208 (58%)
Query: 449 NPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
N + D A V+ +++ EVV FL+ P F +GA+ P+GVL++G GTGKT LA AI
Sbjct: 221 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAI 280
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A EA VP ++ E ++VG AS VR+LF+ A++ AP I+FV++ D RG I
Sbjct: 281 AGEAGVPFFSISGSEF-VEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGI 339
Query: 569 HTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+ E +NQLL E+DGFE GV+++A T +D AL RPGR DR ++ P
Sbjct: 340 GGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 399
Query: 629 SEREKILRI-AAQETMDEEL-IDLVDWR 654
R IL++ A + D ++ ++++ R
Sbjct: 400 KGRTDILKVHAGNKKFDNDVSLEIIAMR 427
Score = 56 (24.8 bits), Expect = 3.3e-32, Sum P(2) = 3.3e-32
Identities = 35/184 (19%), Positives = 68/184 (36%)
Query: 774 GRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFCF 833
G + L P D V + L P + G T ++ +S + L ++V
Sbjct: 491 GHAVCGTLTPGHDAVQKVTLIPRG-QARGLTWFIPSDDPTLIS-----KQQLFARIVGGL 544
Query: 834 GSYAAAQLLLPFGEENLLSSS--EIKQAQEIATRMVLQYGW---GP----DDXXXXXXXX 884
G AA +++ FG+ + + + +++Q +A +MV +G GP D
Sbjct: 545 GGRAAEEII--FGDSEVTTGAVGDLQQITGLARQMVTTFGMSDIGPWSLMDSSAQSDVIM 602
Query: 885 XXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDL 944
++ + V+K+ D AY A ++ NR E + G +
Sbjct: 603 RMMARNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEF 662
Query: 945 ERLM 948
++
Sbjct: 663 RAIL 666
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 376 (137.4 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 85/202 (42%), Positives = 117/202 (57%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
I D A V+ +EEI E V FL+NP ++ +GA+ PRG ++ G GTGKT LA A A E
Sbjct: 293 IKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGE 352
Query: 512 ARVPVVNVEAQE-LEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT 570
A VP ++V E LE ++VG S VR+LF TAR AP IIF+++ D RG+
Sbjct: 353 ANVPFLSVSGSEFLE--MFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQF 410
Query: 571 KQQDH-ESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQS 629
D ES +NQLLVE+DGF + +V+ A T +D AL RPGR DR + +P
Sbjct: 411 GSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIG 470
Query: 630 EREKILRIAAQETMDEELIDLV 651
RE+I ++ + + IDL+
Sbjct: 471 GREQIFKVHLKHIKAADNIDLI 492
Score = 57 (25.1 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 20/107 (18%), Positives = 41/107 (38%)
Query: 845 FGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDXXXXXXXXXXXXXXXXXXXHEYEMAT 902
FG E + S S + ++ +A V QYG P +M
Sbjct: 626 FGPEKITSGASDDFQKVTRMAQAYVTQYGMSPTVGTIAYPIDTRETVQKPFSEATAQMID 685
Query: 903 K-VEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLM 948
+ + K+ AY + K++L +++ E++T ++E ++
Sbjct: 686 EEIRKLVKHAYERTKKLLLEHKQGLENIAQRLLQKEVITYNEVETIL 732
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 385 (140.6 bits), Expect = 5.3e-32, Sum P(2) = 5.3e-32
Identities = 84/197 (42%), Positives = 120/197 (60%)
Query: 441 FERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTG 500
F + VK I KD A + +EEI E V FLQ+P ++++GA+ PRG ++ G GTG
Sbjct: 276 FNQENEVK---IKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTG 332
Query: 501 KTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLF 560
KT LA A A EA VP ++V E ++VG AS VR+LF+TAR++AP IIFV++ D
Sbjct: 333 KTLLAKATAGEAGVPFLSVSGSEF-VEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAI 391
Query: 561 AGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRI 620
RG + E+ +NQLLVE+DGF+ D VV++A T +D+AL RPGR DR
Sbjct: 392 GKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRH 451
Query: 621 FNLQKPTQSEREKILRI 637
++ P R++I ++
Sbjct: 452 ISIDVPDVEGRKQIFKV 468
Score = 48 (22.0 bits), Expect = 5.3e-32, Sum P(2) = 5.3e-32
Identities = 22/133 (16%), Positives = 50/133 (37%)
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGPDDXXXX 880
S+ + +++ G + +L F +S + K+ ++A +M+L+ G D
Sbjct: 617 SQEQFKHRMIMTLGGRVSEEL--HFDTVTSGASDDFKKITQMAQQMILKLGMS-DKLGQI 673
Query: 881 XXXXXXXXXXXXXXXHEYEMAT------KVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXX 934
H Y T +V+++ D +Y ++L +
Sbjct: 674 CYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLTEKLDLVDKVAEELF 733
Query: 935 XYEILTGKDLERL 947
E+LT +D+ ++
Sbjct: 734 KKEVLTREDMIKI 746
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 385 (140.6 bits), Expect = 5.3e-32, Sum P(2) = 5.3e-32
Identities = 84/197 (42%), Positives = 120/197 (60%)
Query: 441 FERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTG 500
F + VK I KD A + +EEI E V FLQ+P ++++GA+ PRG ++ G GTG
Sbjct: 276 FNQENEVK---IKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTG 332
Query: 501 KTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLF 560
KT LA A A EA VP ++V E ++VG AS VR+LF+TAR++AP IIFV++ D
Sbjct: 333 KTLLAKATAGEAGVPFLSVSGSEF-VEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAI 391
Query: 561 AGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRI 620
RG + E+ +NQLLVE+DGF+ D VV++A T +D+AL RPGR DR
Sbjct: 392 GKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRH 451
Query: 621 FNLQKPTQSEREKILRI 637
++ P R++I ++
Sbjct: 452 ISIDVPDVEGRKQIFKV 468
Score = 48 (22.0 bits), Expect = 5.3e-32, Sum P(2) = 5.3e-32
Identities = 22/133 (16%), Positives = 50/133 (37%)
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGPDDXXXX 880
S+ + +++ G + +L F +S + K+ ++A +M+L+ G D
Sbjct: 617 SQEQFKHRMIMTLGGRVSEEL--HFDTVTSGASDDFKKITQMAQQMILKLGMS-DKLGQI 673
Query: 881 XXXXXXXXXXXXXXXHEYEMAT------KVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXX 934
H Y T +V+++ D +Y ++L +
Sbjct: 674 CYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLTEKLDLVDKVAEELF 733
Query: 935 XYEILTGKDLERL 947
E+LT +D+ ++
Sbjct: 734 KKEVLTREDMIKI 746
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 338 (124.0 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 75/200 (37%), Positives = 114/200 (57%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ +D + ++E+ EVV FL++P F +G + P+GVL+VG GTGKT LA A+A E
Sbjct: 297 VTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGE 356
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVR-GQFIHT 570
A+VP + E + L VGQ A VR+LF+ A+ AP +IF+++ D R +H
Sbjct: 357 AKVPFFHAAGPEFDEVL-VGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKRTNSVLHP 415
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
INQLL E+DGF + GV+++ T +D+AL RPGR D + P +
Sbjct: 416 YANQT---INQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTG 472
Query: 631 REKILRIAAQETMDEELIDL 650
R++IL + + + +E IDL
Sbjct: 473 RKEILSLYLTKILHDE-IDL 491
Score = 90 (36.7 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 28/121 (23%), Positives = 52/121 (42%)
Query: 834 GSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDXXXXXXXXXXXXXXX 891
G AA +L+ FG + + S SS++KQA IAT MV +G
Sbjct: 616 GGRAAEELV--FGTDKITSGASSDLKQATSIATHMVRDWGMSDKVGLRTIEASKGLGTGD 673
Query: 892 XXXXHEYEMA-TKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLMDS 950
+ E +++++ +Y +AK +L+K+ YE L D++ +++
Sbjct: 674 TLGPNTIEAVDAEIKRILSDSYERAKAILRKHTREHKALAEALLKYETLDADDIKAILNE 733
Query: 951 N 951
+
Sbjct: 734 S 734
Score = 47 (21.6 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 209 GAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDE 241
G+++ G+ E VD +E V FED G DE
Sbjct: 277 GSVFRIQLGNQVE--VDPEEINVTFEDVKGCDE 307
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 379 (138.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 87/204 (42%), Positives = 121/204 (59%)
Query: 445 KRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSL 504
K KN I KD A E ++EI E V FLQNP ++++GA+ P+G L+VG GTGKT L
Sbjct: 318 KNSKNK-IYFKDVAGCEEAKQEIMEFVHFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLL 376
Query: 505 ALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVR 564
A A A E+ VP +++ + ++VG S VR LFQ AR AP IIF+++ D R
Sbjct: 377 AKATAGESAVPFLSISGSDFME-MFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRAR 435
Query: 565 GQFIHTKQQDH-ESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNL 623
G+ + D ES +NQLLVE+DGF GVV++A T +D+AL RPGR DR +
Sbjct: 436 GRGGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITI 495
Query: 624 QKPTQSEREKILRIAAQET-MDEE 646
KP R++I +I ++ +D E
Sbjct: 496 DKPDIKGRDQIFQIYLKKIKLDHE 519
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 356 (130.4 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
Identities = 80/234 (34%), Positives = 135/234 (57%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLAL 506
V+N + D + +++E+ E++ +L+N F ++GA+ P+G+L+ GE GTGKT +A
Sbjct: 246 VENVKVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIAR 305
Query: 507 AIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQ 566
AIA EA VP + E E ++VG A +RELFQ A+ AP I+F+++ D R
Sbjct: 306 AIAGEANVPFLQASGSEFEE-MFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSS 364
Query: 567 FIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKP 626
++ + +NQLLVELDGFE+ +G+V++ T + +D+AL RPGR+D+ + P
Sbjct: 365 RDNSAVR---MTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLP 421
Query: 627 TQSEREKILRIAAQETMDEELIDL--VDWRKVAEKTALLRPI-ELKLVPVALEG 677
R +IL++ + + + + +DL + R V A L I + + ++EG
Sbjct: 422 DIKGRYEILKMYSNKIVLSKDVDLHVLSRRTVGMTGADLNNILNIAAIKCSVEG 475
Score = 68 (29.0 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
Identities = 22/126 (17%), Positives = 56/126 (44%)
Query: 825 LEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDXXXXXX 882
++ ++ G + +++ FG+ N+ + SS++++A IA +V+ YG G ++
Sbjct: 560 VQSEIDILMGGLVSEEII--FGKNNVTTGCSSDLQKATHIAQSLVMNYGVGINEDNISMF 617
Query: 883 XXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGK 942
+ ++ ++++ +Y +AK +L ++ YE LT
Sbjct: 618 LHDKQNISEEM---KIKIDKSIQRILLDSYNRAKNVLNQHIDELHRIASALVEYETLTSD 674
Query: 943 DLERLM 948
+++ M
Sbjct: 675 EIKLAM 680
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 356 (130.4 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
Identities = 80/234 (34%), Positives = 135/234 (57%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLAL 506
V+N + D + +++E+ E++ +L+N F ++GA+ P+G+L+ GE GTGKT +A
Sbjct: 246 VENVKVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIAR 305
Query: 507 AIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQ 566
AIA EA VP + E E ++VG A +RELFQ A+ AP I+F+++ D R
Sbjct: 306 AIAGEANVPFLQASGSEFEE-MFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVGSKRSS 364
Query: 567 FIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKP 626
++ + +NQLLVELDGFE+ +G+V++ T + +D+AL RPGR+D+ + P
Sbjct: 365 RDNSAVR---MTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVPLP 421
Query: 627 TQSEREKILRIAAQETMDEELIDL--VDWRKVAEKTALLRPI-ELKLVPVALEG 677
R +IL++ + + + + +DL + R V A L I + + ++EG
Sbjct: 422 DIKGRYEILKMYSNKIVLSKDVDLHVLSRRTVGMTGADLNNILNIAAIKCSVEG 475
Score = 68 (29.0 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
Identities = 22/126 (17%), Positives = 56/126 (44%)
Query: 825 LEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDXXXXXX 882
++ ++ G + +++ FG+ N+ + SS++++A IA +V+ YG G ++
Sbjct: 560 VQSEIDILMGGLVSEEII--FGKNNVTTGCSSDLQKATHIAQSLVMNYGVGINEDNISMF 617
Query: 883 XXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGK 942
+ ++ ++++ +Y +AK +L ++ YE LT
Sbjct: 618 LHDKQNISEEM---KIKIDKSIQRILLDSYNRAKNVLNQHIDELHRIASALVEYETLTSD 674
Query: 943 DLERLM 948
+++ M
Sbjct: 675 EIKLAM 680
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 343 (125.8 bits), Expect = 8.2e-31, Sum P(3) = 8.2e-31
Identities = 88/240 (36%), Positives = 130/240 (54%)
Query: 416 KAYFNYRVR-RIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFL 474
K F+ VR R A +DPI+ +KN + + VE ++E+ EVV FL
Sbjct: 248 KGSFSDAVRFRTSSIFDAAVDPIQ--------LKN--VTFEHVKGVEEAKQELQEVVEFL 297
Query: 475 QNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSA 534
+NP F +G + P+G+L+VG GTGKT LA A+A EA VP E + ++VG A
Sbjct: 298 KNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDE-MFVGVGA 356
Query: 535 SNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHE-SFINQLLVELDGFEKQD 593
S +R LF+ A+ AP +IF+++ D G R I + + INQLL E+DGF+ +
Sbjct: 357 SRIRSLFREAKANAPCVIFIDELDSVGGKR---IESPMHPYSRQTINQLLAEMDGFKPNE 413
Query: 594 GVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILR-----IAAQETMDEELI 648
GVV++ T + +D AL RPGR D + KP R +IL+ I +++D E+I
Sbjct: 414 GVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRTEILKWYLNKIKYDQSVDPEII 473
Score = 84 (34.6 bits), Expect = 8.2e-31, Sum P(3) = 8.2e-31
Identities = 30/132 (22%), Positives = 57/132 (43%)
Query: 820 ESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDX 877
E+RS L ++ C G AA +L+ FG +++ + SS+ A +IA MV ++G +
Sbjct: 581 ETRSQLLAQMDVCMGGRAAEELI--FGSDHITTGASSDFDNATKIAKLMVTRFGMS-EKL 637
Query: 878 XXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYE 937
E E+ T + Y+ +AK +L+ + YE
Sbjct: 638 GVMTYTDTGKVSPETQSAIEQEVRTLLRDSYE----RAKNILKTHAKEHKNLAEALLKYE 693
Query: 938 ILTGKDLERLMD 949
L K+++ +++
Sbjct: 694 TLDAKEIQIVLE 705
Score = 38 (18.4 bits), Expect = 8.2e-31, Sum P(3) = 8.2e-31
Identities = 15/68 (22%), Positives = 27/68 (39%)
Query: 295 RDLILENVRNTNDDIMMMIVFPLLDCIIPYSVRMKLGMAWP-QYMDQSVGSTWYLGWQSE 353
RD E+ + + ++ L D + P + + P Y D V S W+ + S
Sbjct: 32 RDTTSEHDPQSTESVLNFRDLGLSD-LKPNQYKELMNRLLPGYYTDNKVSSRWHTSYVS- 89
Query: 354 VEMSFNSR 361
E F ++
Sbjct: 90 AESFFENK 97
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 341 (125.1 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 83/223 (37%), Positives = 124/223 (55%)
Query: 432 AGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGV 491
A +DPI+ +KN + + VE ++E+ EVV FL+NP F +G + P+G+
Sbjct: 270 AAVDPIQ--------LKN--VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGI 319
Query: 492 LIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVI 551
L+VG GTGKT LA A+A EA VP E + ++VG AS +R LF+ A+ AP +
Sbjct: 320 LLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDE-MFVGVGASRIRSLFREAKANAPCV 378
Query: 552 IFVEDFDLFAGVRGQFIHTKQQDHE-SFINQLLVELDGFEKQDGVVLMATTRNIKQIDEA 610
IF+++ D G R I + + INQLL E+DGF+ +GVV++ T + +D A
Sbjct: 379 IFIDELDSVGGKR---IESPMHPYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNA 435
Query: 611 LQRPGRMDRIFNLQKPTQSEREKILR-----IAAQETMDEELI 648
L RPGR D + KP R +IL+ I +++D E+I
Sbjct: 436 LIRPGRFDMQVTVPKPDVRGRTEILKWYLNKIKYDQSVDPEII 478
Score = 84 (34.6 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 30/132 (22%), Positives = 57/132 (43%)
Query: 820 ESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDX 877
E+RS L ++ C G AA +L+ FG +++ + SS+ A +IA MV ++G +
Sbjct: 586 ETRSQLLAQMDVCMGGRAAEELI--FGSDHITTGASSDFDNATKIAKLMVTRFGMS-EKL 642
Query: 878 XXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYE 937
E E+ T + Y+ +AK +L+ + YE
Sbjct: 643 GVMTYTDTGKVSPETQSAIEQEVRTLLRDSYE----RAKNILKTHAKEHKNLAEALLKYE 698
Query: 938 ILTGKDLERLMD 949
L K+++ +++
Sbjct: 699 TLDAKEIQIVLE 710
Score = 38 (18.4 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 15/68 (22%), Positives = 27/68 (39%)
Query: 295 RDLILENVRNTNDDIMMMIVFPLLDCIIPYSVRMKLGMAWP-QYMDQSVGSTWYLGWQSE 353
RD E+ + + ++ L D + P + + P Y D V S W+ + S
Sbjct: 42 RDTTSEHDPQSTESVLNFRDLGLSD-LKPNQYKELMNRLLPGYYTDNKVSSRWHTSYVS- 99
Query: 354 VEMSFNSR 361
E F ++
Sbjct: 100 AESFFENK 107
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 371 (135.7 bits), Expect = 1.5e-30, P = 1.5e-30
Identities = 84/202 (41%), Positives = 118/202 (58%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
I KD A + +EEI E V+FL+ PS +++MGA+ PRG ++ G GTGKT LA A A E
Sbjct: 345 IKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGE 404
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVR--GQFIH 569
A VP V E ++VG A+ VR+LF+TAR+ AP I+F+++ D R G F
Sbjct: 405 AGVPFYFVSGSEF-VEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSG 463
Query: 570 TKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQS 629
+ E+ +NQ+LVE+DGF D VV++A T +D+AL RPGR DR N+ KP
Sbjct: 464 ANDE-RENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELE 522
Query: 630 EREKILRIAAQET-MDEELIDL 650
R+ I + + E+ DL
Sbjct: 523 GRKAIFAVHLHHLKLAGEIFDL 544
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 356 (130.4 bits), Expect = 1.8e-30, Sum P(3) = 1.8e-30
Identities = 92/243 (37%), Positives = 129/243 (53%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLAL 506
V + KD + R E+ E+V FL++PS F +G + P+GVL+ G GTGKT LA
Sbjct: 217 VSQSTVRFKDVQGCDEARAELEEIVDFLKDPSKFTGLGGKLPKGVLLTGPPGTGKTLLAR 276
Query: 507 AIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQ 566
A A EA VP + E + L+VG A +RELF ARD AP IIF+++ D G R
Sbjct: 277 ATAGEAGVPFFFMSGSEFDE-LYVGVGAKRIRELFSQARDKAPAIIFIDELDAIGGKR-- 333
Query: 567 FIHTKQQDH-ESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ K Q + + +NQLLVELDGF + +G++++ T + +D+AL RPGR D+ +
Sbjct: 334 --NPKDQAYAKQTLNQLLVELDGFSQTEGIIIIGATNFPESLDKALTRPGRFDKEVIVDL 391
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIEL-KLV-PVALEGSAFRSK 683
P R IL+ Q E D VD +A T L EL LV A+ S +
Sbjct: 392 PDVRGRIDILKHHMQNV---ETADDVDPSIIARGTPGLSGAELMNLVNQAAVHASQLSAP 448
Query: 684 FLD 686
+D
Sbjct: 449 AVD 451
Score = 58 (25.5 bits), Expect = 1.8e-30, Sum P(3) = 1.8e-30
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 828 KLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYG 871
+L C G A +++ G+EN+ S +S++ A +A MV YG
Sbjct: 535 RLDVCMGGKIAEEMIN--GKENVTSGCASDLSNATSVARAMVTSYG 578
Score = 45 (20.9 bits), Expect = 1.8e-30, Sum P(3) = 1.8e-30
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 209 GAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDE 241
G ++ + + DK VD+ + V F+D G DE
Sbjct: 202 GTIFRNSETSDKS--VDVSQSTVRFKDVQGCDE 232
Score = 41 (19.5 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 714 VKKISRMLVDHLGLTLTKEDLQNVV 738
+K+++ L+++ TLTKE+++ VV
Sbjct: 629 LKRLAEGLLEYE--TLTKEEMEKVV 651
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 378 (138.1 bits), Expect = 1.8e-30, Sum P(3) = 1.8e-30
Identities = 85/220 (38%), Positives = 130/220 (59%)
Query: 433 GIDPI---KNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPR 489
G+ P+ K+ ++ + + I KD A + ++E+ E V FLQNP ++++GA+ PR
Sbjct: 348 GMGPMGFGKSTAKKFNQETDVKIKFKDVAGMAEAKQEVMEFVKFLQNPEKYEKLGAKIPR 407
Query: 490 GVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAP 549
G ++ G GTGKT LA A A EA VP +V E ++VG AS VR+LF+TAR+ AP
Sbjct: 408 GAILSGPPGTGKTLLAKATAGEAGVPFYSVSGSEF-VEMFVGVGASRVRDLFKTARENAP 466
Query: 550 VIIFVEDFDLFAGVRGQFIHTKQQDH-ESFINQLLVELDGFEKQDGVVLMATTRNIKQID 608
I+FV++ D R + T D E+ +NQLLVE+DGF+ D VV++A T +D
Sbjct: 467 SIVFVDEIDAIGKQRSKGNATGANDERETTLNQLLVEMDGFDTSDHVVVLAGTNRPDILD 526
Query: 609 EALQRPGRMDRIFNLQKPTQSEREKILRIAAQE-TMDEEL 647
AL RPGR DR ++ P R++I + Q+ T+ +++
Sbjct: 527 RALMRPGRFDRHVHIDNPELLGRKEIFDVHLQKITLQKDI 566
Score = 49 (22.3 bits), Expect = 1.8e-30, Sum P(3) = 1.8e-30
Identities = 22/126 (17%), Positives = 45/126 (35%)
Query: 825 LEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGPDDXXXXXXXX 884
L +++ G + +L F + + K+ IA MVL++G
Sbjct: 687 LYDRMIMTLGGRVSEEL--HFASVTSGAHDDFKKVTGIAQSMVLRFGMSKTVGMVNYYDT 744
Query: 885 XXXXXXXXXXXHEYE--MATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGK 942
E + ++V+++ Y K K++L + E +T +
Sbjct: 745 RSQDDLTKPFSDETSRIIDSEVQRIVSDCYQKCKQLLTEKSKEVELVAQELLKKEFITRE 804
Query: 943 DLERLM 948
D+ RL+
Sbjct: 805 DMIRLL 810
Score = 37 (18.1 bits), Expect = 1.8e-30, Sum P(3) = 1.8e-30
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 656 VAEKTALLRPIELKLVPVALEGSAFRSKFL 685
V +K+ LL P E K+V G A +L
Sbjct: 621 VEKKSKLLNPEEQKIVAYHEAGHAICGWYL 650
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 371 (135.7 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 85/217 (39%), Positives = 123/217 (56%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
I K+ A + ++EI E V FL+NP + ++GA+ PRG ++ G GTGKT LA A A E
Sbjct: 285 ISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGE 344
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQ--FIH 569
A VP ++V E ++VG AS VR+LF AR +AP IIF+++ D RG+ +
Sbjct: 345 ANVPFLSVSGSEF-VEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALG 403
Query: 570 TKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQS 629
+ E+ +NQLLVE+DGF D VV++A T +D AL RPGR DR + P +
Sbjct: 404 GANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVN 463
Query: 630 EREKILRIAAQE-TMDEELIDLVDWRKVAEKTALLRP 665
R++I + + +D L D D ++ K A L P
Sbjct: 464 GRQQIYLVHLKRLNLDPLLTD--DMNNLSGKLATLTP 498
Score = 47 (21.6 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 25/148 (16%), Positives = 49/148 (33%)
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGPDDXXXX 880
S +++ G + +L P + + K+ ++A MV G P
Sbjct: 602 SEEQFRHRMIMALGGRVSEELHFPSVTSG--AHDDFKKVTQMANAMVTSLGMSPKIGYLS 659
Query: 881 XXXXXXXXXXXXXXXHEYEMAT--KVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEI 938
++ +V+ + D A+ E+L KN E
Sbjct: 660 FDQNDGNFKVNKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEA 719
Query: 939 LTGKDLERLMDSNGGIREKEPFFLSKVD 966
+T +D+ RL+ +E+ F +D
Sbjct: 720 ITREDMIRLLGPRP-FKERNEAFEKYLD 746
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 359 (131.4 bits), Expect = 4.7e-30, P = 4.7e-30
Identities = 76/186 (40%), Positives = 111/186 (59%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
I D A V+ ++ E++E+V FLQNP ++E G + P+GVL+VG G GKT +A A+A E
Sbjct: 149 ITFNDVAGVDEVKMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGE 208
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTK 571
A VP ++VG A VRELF A+ +AP I+F+++ D RG+ + +
Sbjct: 209 AGVPFFYQSGSSF-VEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMSNVE 267
Query: 572 QQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER 631
+ +S +NQLL ++DGFE GV+++A T I+ +D AL R GR DR L P +R
Sbjct: 268 R---DSTLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDR 324
Query: 632 EKILRI 637
KIL I
Sbjct: 325 LKILEI 330
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 374 (136.7 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 84/203 (41%), Positives = 120/203 (59%)
Query: 445 KRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSL 504
K KN I KD A + ++EI E V FL+NP ++++GA+ P+G L+VG GTGKT L
Sbjct: 313 KHSKNK-IYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLL 371
Query: 505 ALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVR 564
A A A E+ VP +++ + ++VG S VR LFQ AR AP IIF+++ D R
Sbjct: 372 AKATAGESGVPFLSISGSDFME-MFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRAR 430
Query: 565 GQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
G+ + ES +NQLLVE+DGF GVV++A T +D+AL RPGR DR +
Sbjct: 431 GRGGLGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITID 490
Query: 625 KPTQSEREKILRIAAQET-MDEE 646
KP R++I +I ++ +D E
Sbjct: 491 KPDIKGRDQIFKIYLKKIKLDHE 513
Score = 37 (18.1 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 149 VDFGKQYVAQRQERILLDRDRVVSKTWYNE 178
VD ++ + + QE + +DR V T+ +E
Sbjct: 227 VDSFEEKLEEAQEALGVDRHEYVPVTYVSE 256
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 364 (133.2 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 81/218 (37%), Positives = 122/218 (55%)
Query: 438 KNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGER 497
K+ R + I D A ++ + EI E V+FL++P FQ++GA+ PRG ++ G
Sbjct: 385 KSRARRFNHETDVKIKFSDVAGMDEAKVEIMEFVSFLKSPERFQKLGAKIPRGAILSGPP 444
Query: 498 GTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDF 557
GTGKT LA A A E+ VP +V E ++VG S VR+LF AR P IIF+++
Sbjct: 445 GTGKTLLAKATAGESGVPFFSVSGSEF-VEMFVGVGPSRVRDLFANARKNTPCIIFIDEI 503
Query: 558 DLFAGVRGQFIHTKQQDH-ESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGR 616
D R + D ES +NQ+L E+DGF D VV++A T +D+AL RPGR
Sbjct: 504 DAIGKSRSAKNFSGGNDERESTLNQILTEMDGFNTSDQVVVLAGTNRPDVLDKALMRPGR 563
Query: 617 MDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWR 654
DR ++ +PT R++I R+ ++ + +E +D + R
Sbjct: 564 FDRHISIDRPTMDGRKQIFRVHLKKIVTKEDMDYLTGR 601
Score = 49 (22.3 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 16/98 (16%), Positives = 37/98 (37%)
Query: 852 SSSEIKQAQEIATRMVLQYGWGPD-DXXXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDL 910
+S + + +AT MV ++G P ++ +V ++ +
Sbjct: 742 ASDDFNKVTRLATAMVTKFGMSPKLKYIYYEEDPSSQLHKPFSEETAKDIDIEVRRIVNE 801
Query: 911 AYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLM 948
AY + +++L + E+L+ D+ RL+
Sbjct: 802 AYKQCRDLLTAKKKEVGLVAEELLAKEVLSRDDMVRLL 839
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 337 (123.7 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 77/209 (36%), Positives = 119/209 (56%)
Query: 446 RVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
++KN + + VE ++E+ EVV FL+NP F +G + P+G+L+VG GTGKT LA
Sbjct: 274 QMKN--VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLA 331
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A EA VP E + ++VG AS +R LF+ A+ AP +IF+++ D G R
Sbjct: 332 RAVAGEADVPFYYASGSEFDE-MFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR- 389
Query: 566 QFIHTKQQDHE-SFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
I + + INQLL E+DGF+ +GV+++ T + +D AL RPGR D +
Sbjct: 390 --IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVP 447
Query: 625 KPTQSEREKILR-----IAAQETMDEELI 648
+P R +IL+ I +++D E+I
Sbjct: 448 RPDVKGRTEILKWYLNKIKFDKSVDPEII 476
Score = 70 (29.7 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 27/132 (20%), Positives = 56/132 (42%)
Query: 820 ESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDX 877
E+R+ L ++ G A +L+ FG +++ + SS+ A +IA RMV ++G +
Sbjct: 584 ETRAQLLAQMDVSMGGRVAEELI--FGTDHITTGASSDFDNATKIAKRMVTKFGMS-EKL 640
Query: 878 XXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYE 937
E E+ + + Y+ +AK +L+ + YE
Sbjct: 641 GVMTYSDTGKLSPETQSAIEQEIRILLRESYE----RAKHILKTHAKEHKNLAEALLTYE 696
Query: 938 ILTGKDLERLMD 949
L K+++ +++
Sbjct: 697 TLDAKEIQIVLE 708
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 337 (123.7 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 77/209 (36%), Positives = 119/209 (56%)
Query: 446 RVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
++KN + + VE ++E+ EVV FL+NP F +G + P+G+L+VG GTGKT LA
Sbjct: 274 QMKN--VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLA 331
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A EA VP E + ++VG AS +R LF+ A+ AP +IF+++ D G R
Sbjct: 332 RAVAGEADVPFYYASGSEFDE-MFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR- 389
Query: 566 QFIHTKQQDHE-SFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
I + + INQLL E+DGF+ +GV+++ T + +D AL RPGR D +
Sbjct: 390 --IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVP 447
Query: 625 KPTQSEREKILR-----IAAQETMDEELI 648
+P R +IL+ I +++D E+I
Sbjct: 448 RPDVKGRTEILKWYLNKIKFDKSVDPEII 476
Score = 70 (29.7 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 27/132 (20%), Positives = 56/132 (42%)
Query: 820 ESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDX 877
E+R+ L ++ G A +L+ FG +++ + SS+ A +IA RMV ++G +
Sbjct: 584 ETRAQLLAQMDVSMGGRVAEELI--FGTDHITTGASSDFDNATKIAKRMVTKFGMS-EKL 640
Query: 878 XXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYE 937
E E+ + + Y+ +AK +L+ + YE
Sbjct: 641 GVMTYSDTGKLSPETQSAIEQEIRILLRESYE----RAKHILKTHAKEHKNLAEALLTYE 696
Query: 938 ILTGKDLERLMD 949
L K+++ +++
Sbjct: 697 TLDAKEIQIVLE 708
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 333 (122.3 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 73/192 (38%), Positives = 110/192 (57%)
Query: 446 RVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
++KN + + VE + E+ EVV FL+NP F +G + P+G+L+VG GTGKT LA
Sbjct: 281 QMKN--VTFEHVKGVEEAKNELQEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLA 338
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A EA VP E + ++VG AS +R LF+ A+ AP +IF+++ D G R
Sbjct: 339 RAVAGEADVPFYYASGSEFDE-MFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGGKR- 396
Query: 566 QFIHTKQQDHE-SFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
I + + INQLL E+DGF+ +GV+++ T + +D AL RPGR D +
Sbjct: 397 --IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVP 454
Query: 625 KPTQSEREKILR 636
+P R +IL+
Sbjct: 455 RPDVKGRTEILK 466
Score = 74 (31.1 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 28/132 (21%), Positives = 54/132 (40%)
Query: 820 ESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDX 877
E+R+ L ++ G A +L+ FG EN+ + SS+ A +IA MV ++G +
Sbjct: 591 ETRAQLLAQMDVSMGGRVAEELI--FGNENITTGASSDFDSATKIAKMMVTRFGMS-EKL 647
Query: 878 XXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYE 937
E+E+ + Y+ +AK +L+ YE
Sbjct: 648 GVMTYSDLTKQSPETQAAIEHEVRILLRDSYE----RAKALLKSRAKEHRNLAEALLRYE 703
Query: 938 ILTGKDLERLMD 949
L K+++ +++
Sbjct: 704 TLDAKEIQLVLE 715
Score = 46 (21.3 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 624 QKP-TQSEREKILRIAAQETMD--EELID--LVDWRKVAEKTALLR--PIELKLVPVALE 676
Q P TQ+ E +RI +++ + + L+ + R +AE ALLR ++ K + + LE
Sbjct: 658 QSPETQAAIEHEVRILLRDSYERAKALLKSRAKEHRNLAE--ALLRYETLDAKEIQLVLE 715
Query: 677 GSAFRSK 683
G A S+
Sbjct: 716 GKALNSR 722
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 338 (124.0 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 77/209 (36%), Positives = 119/209 (56%)
Query: 446 RVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
++KN + + VE ++E+ EVV FL+NP F +G + P+G+L+VG GTGKT LA
Sbjct: 308 QMKN--VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLA 365
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A EA VP E + ++VG AS +R LF+ A+ AP +IF+++ D G R
Sbjct: 366 RAVAGEADVPFYYASGSEFDE-MFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR- 423
Query: 566 QFIHTKQQDHE-SFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
I + + INQLL E+DGF+ +GV+++ T + +D AL RPGR D +
Sbjct: 424 --IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVP 481
Query: 625 KPTQSEREKILR-----IAAQETMDEELI 648
+P R +IL+ I +++D E+I
Sbjct: 482 RPDVKGRTEILKWYLNKIKFDQSVDPEII 510
Score = 68 (29.0 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 27/132 (20%), Positives = 55/132 (41%)
Query: 820 ESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDX 877
E+R+ L ++ G A +L+ FG +++ + SS+ A +IA RMV ++G +
Sbjct: 618 ETRAQLLAQMDVSMGGRVAEELI--FGTDHITTGASSDFDNATKIAKRMVTKFGMS-EKL 674
Query: 878 XXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYE 937
E E+ + Y+ +AK +L+ + YE
Sbjct: 675 GVMTYSDTGKLSPETQSAIEQEIRILLRDSYE----RAKHILKTHAKEHKNLAEALLTYE 730
Query: 938 ILTGKDLERLMD 949
L K+++ +++
Sbjct: 731 TLDAKEIQIVLE 742
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 340 (124.7 bits), Expect = 5.4e-29, Sum P(2) = 5.4e-29
Identities = 86/236 (36%), Positives = 122/236 (51%)
Query: 418 YFNYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMRE---EINEVVAFL 474
+F Y RI+ + G I + F + NP F V M E E+ E+V +L
Sbjct: 210 FFGYLTGRIR--VRVGDRQIGSLFFSNPQEVNPEDVQVTFDDVRGMDEAKLEVEEIVDYL 267
Query: 475 QNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSA 534
++P + +G R P+GVL+VG GTGKT LA AIA EA+VP + E + L VGQ A
Sbjct: 268 KDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVL-VGQGA 326
Query: 535 SNVRELFQTARDLAPVIIFVEDFDLFAGVR-GQFIHTKQQDHESFINQLLVELDGFEKQD 593
VR+LF A+ AP IIF+++ D R IH INQLL E+DGF + +
Sbjct: 327 RRVRDLFDKAKARAPCIIFIDEIDSVGSKRVSNSIHPYANQT---INQLLSEMDGFTRNE 383
Query: 594 GVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELID 649
G++++A T + +D+AL RPGR D + KP + R I + + ID
Sbjct: 384 GIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGGID 439
Score = 65 (27.9 bits), Expect = 5.4e-29, Sum P(2) = 5.4e-29
Identities = 34/173 (19%), Positives = 69/173 (39%)
Query: 804 TKITKAEKEGSMSGNPESRSY-LEKKLVFC-----FGSYAAAQLLLPFGEENLLSSS--E 855
T I + + G + PE SY L K + G A +L+ FG++ + + + +
Sbjct: 530 TIIPRGQSLGHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEELI--FGDDKVTTGAADD 587
Query: 856 IKQAQEIATRMVLQYGW----GPDDXXXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLA 911
+ +A ++A +MV +G G D + ++ +V +
Sbjct: 588 LSKATQLAVQMVKVFGMSDKVGLRDFTAQDNESALVKVSDLAPQTAELIDAEINRVLQES 647
Query: 912 YYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLMDSNGGIREKEPFFLSK 964
Y +AK +L+ + YE L+ +++R++ S I+ P + K
Sbjct: 648 YKRAKVILETKKKEHQLLAEALLEYETLSADEVKRVI-SGQKIKRPTPAAVKK 699
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 338 (124.0 bits), Expect = 6.0e-29, Sum P(2) = 6.0e-29
Identities = 77/209 (36%), Positives = 119/209 (56%)
Query: 446 RVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
++KN + + VE ++E+ EVV FL+NP F +G + P+G+L+VG GTGKT LA
Sbjct: 327 QMKN--VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLA 384
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A EA VP E + ++VG AS +R LF+ A+ AP +IF+++ D G R
Sbjct: 385 RAVAGEADVPFYYASGSEFDE-MFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR- 442
Query: 566 QFIHTKQQDHE-SFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
I + + INQLL E+DGF+ +GV+++ T + +D AL RPGR D +
Sbjct: 443 --IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVP 500
Query: 625 KPTQSEREKILR-----IAAQETMDEELI 648
+P R +IL+ I +++D E+I
Sbjct: 501 RPDVKGRTEILKWYLNKIKFDQSVDPEII 529
Score = 68 (29.0 bits), Expect = 6.0e-29, Sum P(2) = 6.0e-29
Identities = 27/132 (20%), Positives = 55/132 (41%)
Query: 820 ESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDX 877
E+R+ L ++ G A +L+ FG +++ + SS+ A +IA RMV ++G +
Sbjct: 637 ETRAQLLAQMDVSMGGRVAEELI--FGTDHITTGASSDFDNATKIAKRMVTKFGMS-EKL 693
Query: 878 XXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYE 937
E E+ + Y+ +AK +L+ + YE
Sbjct: 694 GVMTYSDTGKLSPETQSAIEQEIRILLRDSYE----RAKHILKTHAKEHKNLAEALLTYE 749
Query: 938 ILTGKDLERLMD 949
L K+++ +++
Sbjct: 750 TLDAKEIQIVLE 761
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 337 (123.7 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 77/209 (36%), Positives = 119/209 (56%)
Query: 446 RVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
++KN + + VE ++E+ EVV FL+NP F +G + P+G+L+VG GTGKT LA
Sbjct: 332 QMKN--VTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLA 389
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A EA VP E + ++VG AS +R LF+ A+ AP +IF+++ D G R
Sbjct: 390 RAVAGEADVPFYYASGSEFDE-MFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR- 447
Query: 566 QFIHTKQQDHE-SFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
I + + INQLL E+DGF+ +GV+++ T + +D AL RPGR D +
Sbjct: 448 --IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVP 505
Query: 625 KPTQSEREKILR-----IAAQETMDEELI 648
+P R +IL+ I +++D E+I
Sbjct: 506 RPDVKGRTEILKWYLNKIKFDQSVDPEII 534
Score = 68 (29.0 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 27/132 (20%), Positives = 55/132 (41%)
Query: 820 ESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDX 877
E+R+ L ++ G A +L+ FG +++ + SS+ A +IA RMV ++G +
Sbjct: 642 ETRAQLLAQMDVSMGGRVAEELI--FGTDHITTGASSDFDNATKIAKRMVTKFGMS-EKL 698
Query: 878 XXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYE 937
E E+ + Y+ +AK +L+ + YE
Sbjct: 699 GVMTYSDTGKLSPETQSAIEQEIRILLRDSYE----RAKHILKTHAKEHKNLAEALLTYE 754
Query: 938 ILTGKDLERLMD 949
L K+++ +++
Sbjct: 755 TLDAKEIQIVLE 766
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 332 (121.9 bits), Expect = 8.1e-29, Sum P(2) = 8.1e-29
Identities = 89/259 (34%), Positives = 132/259 (50%)
Query: 397 LLGFGPMRRDPNFRKLRRVKAYFNYRVR-RIKRKKKAGIDPIKNAFERMKRVKNPPIPLK 455
L G + R P F K F+ VR R + +DP++ +KN I +
Sbjct: 250 LAGIYGVSRSPFFSG----KGSFSDTVRFRTTSGLDSSVDPVQ--------MKN--ITFE 295
Query: 456 DFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVP 515
VE + E+ +VV FL+NP F +G + P+G+L+VG GTGKT LA A+A EA VP
Sbjct: 296 HVKGVEEAKNELQDVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVP 355
Query: 516 VVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDH 575
E + ++VG AS +R LF+ A+ AP +IF+++ D G R I + +
Sbjct: 356 FYYASGSEFDE-MFVGVGASRIRNLFKEAKASAPCVIFIDELDSVGGKR---IESPMHPY 411
Query: 576 E-SFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
INQLL E+DGF+ +GV+++ T + +D AL RPGR D + P R +I
Sbjct: 412 SRQTINQLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQVTVPIPDVKGRTEI 471
Query: 635 L-----RIAAQETMDEELI 648
L +I +D E+I
Sbjct: 472 LEWYLKKIKVDSAIDAEII 490
Score = 72 (30.4 bits), Expect = 8.1e-29, Sum P(2) = 8.1e-29
Identities = 28/132 (21%), Positives = 54/132 (40%)
Query: 820 ESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDX 877
E+R+ L ++ G A +L+ FG + + S SS+ A +IA MV ++G D
Sbjct: 598 ETRAQLLAQMDVSMGGRVAEELV--FGNDQITSGASSDFDGATKIAQMMVTRFGMS-DKL 654
Query: 878 XXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYE 937
E E+ ++ Y+ +AK++L+ YE
Sbjct: 655 GVMTYSDLTKHSPETRAAVEQEIRVLLQSSYE----RAKKILKTYSKEHKLLADALLTYE 710
Query: 938 ILTGKDLERLMD 949
L K+++ +++
Sbjct: 711 TLNAKEIQMILE 722
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 338 (124.0 bits), Expect = 8.6e-29, Sum P(2) = 8.6e-29
Identities = 77/209 (36%), Positives = 119/209 (56%)
Query: 446 RVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
++KN + + VE ++E+ EVV FL+NP F +G + P+G+L+VG GTGKT LA
Sbjct: 274 QMKN--VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLA 331
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A EA VP E + ++VG AS +R LF+ A+ AP +IF+++ D G R
Sbjct: 332 RAVAGEADVPFYYASGSEFDE-MFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR- 389
Query: 566 QFIHTKQQDHE-SFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
I + + INQLL E+DGF+ +GV+++ T + +D AL RPGR D +
Sbjct: 390 --IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVP 447
Query: 625 KPTQSEREKILR-----IAAQETMDEELI 648
+P R +IL+ I +++D E+I
Sbjct: 448 RPDVKGRTEILKWYLNKIKFDQSVDPEII 476
Score = 65 (27.9 bits), Expect = 8.6e-29, Sum P(2) = 8.6e-29
Identities = 27/134 (20%), Positives = 55/134 (41%)
Query: 820 ESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS----SSEIKQAQEIATRMVLQYGWGPD 875
E+R+ L ++ G A +L+ FG +++ + SS+ A +IA RMV ++G +
Sbjct: 584 ETRAQLLAQMDVSMGGRVAEELI--FGSDHITTGYCASSDFDNATKIAKRMVTKFGMS-E 640
Query: 876 DXXXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXX 935
E E+ + Y+ +AK +L+ +
Sbjct: 641 KLGVMTYSDTGKLSPETQSAIEQEIRILLRDSYE----RAKHILKTHAKEHKNLAEALLT 696
Query: 936 YEILTGKDLERLMD 949
YE L K+++ +++
Sbjct: 697 YETLDAKEIQIVLE 710
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 354 (129.7 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 85/207 (41%), Positives = 115/207 (55%)
Query: 456 DFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVP 515
D A E + EI E V FL+NP +Q++GA+ P+G L+ G GTGKT LA A A EA VP
Sbjct: 304 DVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKATAGEAGVP 363
Query: 516 VVNVEAQE-LEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ V E LE ++VG + VR++F AR AP I+FV++ D RG+ Q +
Sbjct: 364 FITVNGSEFLE--MFVGVGPARVRDMFALARKNAPCILFVDEIDAIGRKRGRGHFGGQSE 421
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
E+ +NQLLVE+DGF VV++A T +D AL RPGR DR + P R I
Sbjct: 422 QENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYIGPPDIKGRSSI 481
Query: 635 LRIAAQET-MDEELIDLVDWRKVAEKT 660
R+ + +DE L RK+A T
Sbjct: 482 FRVHLRPLKLDESLSKDALARKLAALT 508
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 335 (123.0 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 77/209 (36%), Positives = 122/209 (58%)
Query: 446 RVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
++KN + + VE ++E+ EVV FL+NP F +G + P+G+L+VG GTGKT LA
Sbjct: 274 QMKN--VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLA 331
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A EA VP E + ++VG AS +R LF+ A+ AP +IF+++ D G R
Sbjct: 332 RAVAGEADVPFYYASGSEFDE-MFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRI 390
Query: 566 QF-IHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
+F +H + ++ I QLL E+DGF+ +GV+++ T + +D AL RPGR D +
Sbjct: 391 EFPMHPYSR--QTII-QLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVP 447
Query: 625 KPTQSEREKILR-----IAAQETMDEELI 648
+P R +IL+ I +++D E+I
Sbjct: 448 RPDVKGRTEILKWYLNKIKFDKSVDPEII 476
Score = 67 (28.6 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 27/132 (20%), Positives = 55/132 (41%)
Query: 820 ESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDX 877
E R+ L ++ G A +L+ FG +++ + SS+ A +IA RMV ++G +
Sbjct: 584 EIRAQLLAQMDVSMGGRVAEELI--FGTDHITTGASSDFDNATKIAKRMVTKFGMS-EKL 640
Query: 878 XXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYE 937
E E+ + + Y+ +AK +L+ + YE
Sbjct: 641 GVMTYSDTGKLSPETQSAIEQEIRILLRESYE----RAKHILKTHAKEHKNLAEALLTYE 696
Query: 938 ILTGKDLERLMD 949
L K+++ +++
Sbjct: 697 TLDAKEIQIVLE 708
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 338 (124.0 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 77/209 (36%), Positives = 119/209 (56%)
Query: 446 RVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
++KN + + VE ++E+ EVV FL+NP F +G + P+G+L+VG GTGKT LA
Sbjct: 274 QMKN--VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLA 331
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A EA VP E + ++VG AS +R LF+ A+ AP +IF+++ D G R
Sbjct: 332 RAVAGEADVPFYYASGSEFDE-MFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKR- 389
Query: 566 QFIHTKQQDHE-SFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
I + + INQLL E+DGF+ +GV+++ T + +D AL RPGR D +
Sbjct: 390 --IESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVP 447
Query: 625 KPTQSEREKILR-----IAAQETMDEELI 648
+P R +IL+ I +++D E+I
Sbjct: 448 RPDVKGRTEILKWYLNKIKFDQSVDPEII 476
Score = 61 (26.5 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 820 ESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYG 871
E+R+ L ++ G A +L+ FG +++ + SS+ A +IA RMV ++G
Sbjct: 584 ETRAQLLAQMDVSMGGRVAEELI--FGTDHITTGASSDFDNATKIAKRMVTKFG 635
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 354 (129.7 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 83/215 (38%), Positives = 119/215 (55%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ KD A E + EI E V FL+NP ++++GA+ P+G ++ G GTGKT LA A A E
Sbjct: 149 VKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGE 208
Query: 512 ARVPVVNVEAQE-LEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT 570
A VP + V E LE ++VG + VR+LF AR AP I+F+++ D RG+
Sbjct: 209 ANVPFITVNGSEFLE--MFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFG 266
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
Q + E+ +NQLLVE+DGF VV++A T +D AL RPGR DR + P
Sbjct: 267 GQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKG 326
Query: 631 REKILRIAAQETMDEELIDLVDWRKVAEKTALLRP 665
R I ++ + +L ++D +A K A L P
Sbjct: 327 RASIFKVHLRPL---KLDTVLDKDNLARKLASLTP 358
Score = 41 (19.5 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 658 EKTALLRPIELKLVPVALEGSAFRSKFLD-TDELM 691
+KT +L+P E K V G A FL+ D L+
Sbjct: 402 KKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLL 436
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 337 (123.7 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 80/222 (36%), Positives = 117/222 (52%)
Query: 417 AYFNYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQN 476
AY + V I + + IK + ++ + D + ++E+ E+V FL N
Sbjct: 277 AYASMIVLSIVLETTGVLKNIKGPHSNEAQPEHQTVRFSDVHGCDEAKDELQELVEFLLN 336
Query: 477 PSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASN 536
P F +G + P+GVL+VG GTGKT LA A+A EA VP + E + ++VG A
Sbjct: 337 PERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYMSGSEFDE-VYVGVGAKR 395
Query: 537 VRELFQTARDLAPVIIFVEDFDLFAGVRGQ--FIHTKQQDHESFINQLLVELDGFEKQDG 594
VRELF AR +P IIF+++ D R + + KQ +NQLL ELDGF + G
Sbjct: 396 VRELFNQARSKSPAIIFIDELDAIGAKRNERDAAYVKQT-----LNQLLTELDGFSQSTG 450
Query: 595 VVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILR 636
V+++A T + +D+AL RPGR DR + P R IL+
Sbjct: 451 VIILAATNYPELLDKALTRPGRFDRKVVVDLPDVRGRMDILK 492
Score = 64 (27.6 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 37/188 (19%), Positives = 75/188 (39%)
Query: 765 KLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSY 824
KL A AG L+A P+ + + + P +G T E M S++Y
Sbjct: 568 KLLTAYHEAGHALVAYFSPSSMPLYKITIMPRGMS-LGSTHFLP---EMDMV----SKNY 619
Query: 825 LE--KKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWGPDDXXXX 880
++ + G A +L+ +GE+ + S S+++ A A +V ++G+
Sbjct: 620 VQYLSDIDVSMGGKVAEELI--YGEDKVTSGISADLASATRTAFTLVTRFGYSKK----L 673
Query: 881 XXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILT 940
+ E+ +V ++ + A +A +L + R YE LT
Sbjct: 674 GNVDLYANYDSLSSETKQEIEAEVRRLVEEARQRATNILTERRHELELLTKALIKYETLT 733
Query: 941 GKDLERLM 948
+++E+++
Sbjct: 734 KEEMEKVL 741
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 349 (127.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 83/215 (38%), Positives = 120/215 (55%)
Query: 449 NPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
N + D A E + EI E V FL+NP +Q++GA+ P+G ++ G GTGKT LA A
Sbjct: 266 NIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKAT 325
Query: 509 AAEARVPVVNVEAQE-LEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQF 567
A EA+VP + V E LE ++VG + VR++F AR AP I+F+++ D RG+
Sbjct: 326 AGEAKVPFITVNGSEFLE--MFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRG 383
Query: 568 IHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPT 627
Q + E+ +NQ+LVE+DGF VV++A T +D AL RPGR DR + P
Sbjct: 384 HLGGQSEQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPD 443
Query: 628 QSEREKILRIAAQET-MDEELI-DLVDWRKVAEKT 660
R I ++ + +DE L D + RK+A T
Sbjct: 444 IKGRSSIFKVHLRPLKLDESLTRDALS-RKLAALT 477
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 351 (128.6 bits), Expect = 5.2e-28, Sum P(3) = 5.2e-28
Identities = 99/321 (30%), Positives = 162/321 (50%)
Query: 442 ERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGK 501
+++ + P + D A VE +EE+ E+V FL+ P + ++GA+ P+G+L+VG GTGK
Sbjct: 165 KKLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVGPPGTGK 224
Query: 502 TSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFA 561
T LA A+A EA VP +V ++VG AS VR+LF+ A+ AP I+F+++ D
Sbjct: 225 TLLAKAVAGEADVPFFSVSGSSF-IEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIG 283
Query: 562 GVRGQF-IHTKQQDHESFINQLLVELDGFEKQDG-VVLMATTRNIKQIDEALQRPGRMDR 619
R + + E +NQLL E+DGF + V+++A T + +D AL RPGR DR
Sbjct: 284 KSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDR 343
Query: 620 IFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLV--PVALEG 677
+ KP R IL++ ++ + + D +A TA L +L + AL
Sbjct: 344 QVLVDKPDFKGRCDILKVHMKDVKISPKVKVED---IARLTAGLAGADLANIINEAALLA 400
Query: 678 SAFRSKFLDTDELMSYCGWFATFSGVVPKWFRKTKIVKKI-SRMLVDHLGLTLTKEDLQN 736
K+++ ++L+ +G+ K R + KKI + H + T + +
Sbjct: 401 GRDSKKYVEQNDLVEAVE--RAIAGLEKKSRRINEKEKKIVTYHECGHALIAETTKGAKR 458
Query: 737 VVDL-MEPYGQISNGIELLTP 756
V + + P G + G L TP
Sbjct: 459 VSKVSVIPRGLAALGYTLNTP 479
Score = 43 (20.2 bits), Expect = 5.2e-28, Sum P(3) = 5.2e-28
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 365 DLNWSIWFLIRTAVYGYVLFHILRFMKRKIPRLLGFGPMRRDPNFRKLRRVKAYFNYRVR 424
D+ +S W L +G +F R K +LG G ++ N K +VK V
Sbjct: 127 DILFS-WVLPVFIFFGIWMFLASRMQKNMGSSILGIGSSKKLVNSEK-PKVKFSDVAGVE 184
Query: 425 RIKRKKKAGIDPIK 438
K + K +D +K
Sbjct: 185 EAKEEVKEIVDFLK 198
Score = 39 (18.8 bits), Expect = 5.2e-28, Sum P(3) = 5.2e-28
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 190 VPYAVSNKIVESARI 204
VPY+ K++ES +I
Sbjct: 60 VPYSELKKLIESGQI 74
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 337 (123.7 bits), Expect = 5.3e-28, Sum P(3) = 5.3e-28
Identities = 79/218 (36%), Positives = 120/218 (55%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ D + R E+ E+V FL++P+ ++ +G + P+GVL+ G GTGKT LA A A E
Sbjct: 278 VKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGE 337
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTK 571
A V + E + ++VG A +R+LF AR AP IIF+++ D G R + K
Sbjct: 338 AGVDFFFMSGSEFDE-VYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKR----NPK 392
Query: 572 QQDH-ESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
Q + + +NQLLVELDGF + G++++ T + +D+AL RPGR D++ N+ P
Sbjct: 393 DQAYAKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRG 452
Query: 631 REKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIEL 668
R IL+ ++ L D VD +A T L EL
Sbjct: 453 RADILKHHMKKIT---LADNVDPTIIARGTPGLSGAEL 487
Score = 65 (27.9 bits), Expect = 5.3e-28, Sum P(3) = 5.3e-28
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 826 EKKLVFCFGSYAAAQLLLPFGEENLLSS--SEIKQAQEIATRMVLQYGWGPD 875
+ +L C G A +L+ +G++N S S+++ A A MV QYG D
Sbjct: 589 QARLDVCMGGKIAEELI--YGKDNTTSGCGSDLQSATGTARAMVTQYGMSDD 638
Score = 38 (18.4 bits), Expect = 5.3e-28, Sum P(3) = 5.3e-28
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 224 VDIKEFEVLFEDFGGFDE 241
VD+ + V F+D G DE
Sbjct: 271 VDVAKTNVKFDDVCGCDE 288
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 323 (118.8 bits), Expect = 6.7e-28, P = 6.7e-28
Identities = 74/225 (32%), Positives = 123/225 (54%)
Query: 448 KNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLAL 506
+ P + +D +E +EI EVV L++P F+++G P+G+L+ G GTGKT LA
Sbjct: 163 ERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAK 222
Query: 507 AIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQ 566
A+A E + V EL ++G+ AS V+++F+ A++ AP IIF+++ D A R
Sbjct: 223 AVATETNATFIRVVGSEL-VKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTD 281
Query: 567 FIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKP 626
+ ++ + + QLL E+DGF+ + V ++ T +D A+ RPGR DRI + P
Sbjct: 282 ALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAP 341
Query: 627 TQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLV 671
+ R +IL+I T L + V+ ++A+ T ELK +
Sbjct: 342 DEKGRLEILKI---HTRKMNLAEDVNLEEIAKMTEGCVGAELKAI 383
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 345 (126.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 87/238 (36%), Positives = 131/238 (55%)
Query: 409 FRKLRRVKAYFNYR--VRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREE 466
F R+ K FN + + + K IDP ++ E K++K I KD A + E
Sbjct: 242 FVLFRKFKGSFNMSDMMSNMTKGKFTIIDP--HSVEGKKQLK---IKFKDVAGCSEAKVE 296
Query: 467 INEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEA 526
I E V +L+NP F ++GA+ PRG L+ G G GKT LA A+AAE+ VP +++ E
Sbjct: 297 IREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMNGSEFVE 356
Query: 527 GLWVGQSASNVRELFQTARDLAPVIIFVEDFDLF-------AGVRGQFIHTKQQDHESFI 579
+ G AS +R LF+ AR AP II++++ D AG G F ++ ++ +
Sbjct: 357 VIG-GLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGGGFGGGSGEEEQT-L 414
Query: 580 NQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI 637
NQLLVE+DG +GVV++A+T +D+AL RPGR DR ++ PT ER+ + +
Sbjct: 415 NQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKDMFEL 472
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 349 (127.9 bits), Expect = 8.8e-28, Sum P(2) = 8.8e-28
Identities = 94/257 (36%), Positives = 136/257 (52%)
Query: 417 AYFNYRVRR----IKRKKKAGIDPIKNAFERMKRVKNPPIPLK--DFASVESMREEINEV 470
A+ Y +RR I R + G+ + + E +V I +K D A E + EI E
Sbjct: 56 AFLLYTIRRGPAGIGRSGR-GMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEF 114
Query: 471 VAFLQNPSAFQEMGARAPR-GVLIVGERGTGKTSLALAIAAEARVPVVNVEAQE-LEAGL 528
V FL+NP +Q++GA+ P+ G ++ G GTGKT LA A A EA VP + V E LE +
Sbjct: 115 VNFLKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE--M 172
Query: 529 WVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDG 588
+VG + VR+LF AR AP I+F+++ D RG+ Q + E+ +NQLLVE+DG
Sbjct: 173 FVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDG 232
Query: 589 FEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELI 648
F VV++A T +D AL RPGR DR + P R I ++ + +L
Sbjct: 233 FNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPL---KLD 289
Query: 649 DLVDWRKVAEKTALLRP 665
++ K+A K A L P
Sbjct: 290 STLEKEKLARKLASLTP 306
Score = 38 (18.4 bits), Expect = 8.8e-28, Sum P(2) = 8.8e-28
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 658 EKTALLRPIELKLVPVALEGSAFRSKFLD-TDELM 691
+KT +L+P E K V G A +L+ D L+
Sbjct: 350 KKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLL 384
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 356 (130.4 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 84/223 (37%), Positives = 119/223 (53%)
Query: 418 YFNYRV-RRIKRKKKAGIDP-IKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQ 475
Y +R R IK K N FE+ + D A + + EI E V FL+
Sbjct: 267 YLIFRTFRSIKSNKMFSQGKSTANKFEK----STSTVKFSDVAGLGEAKVEIEEFVNFLK 322
Query: 476 NPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAS 535
NP F ++GA+ PRG ++VG GTGKT +A A A EA VP + + ++VG S
Sbjct: 323 NPKKFHDIGAKIPRGAILVGPPGTGKTLIAKATAGEANVPFYSTSGSDF-VEMFVGVGPS 381
Query: 536 NVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDH-ESFINQLLVELDGFEKQDG 594
VR+LF+ AR AP I+F+++ D RG+ + D E+ +NQLLVE+DGF+
Sbjct: 382 RVRDLFEQARKNAPCIVFIDEIDAVGRARGKGGFSGSNDERENTLNQLLVEMDGFKPLKN 441
Query: 595 VVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI 637
VV++A T +D+AL RPGR DR + P RE+I R+
Sbjct: 442 VVVLAATNRPDILDKALLRPGRFDRQITIDNPDLKSREEIFRV 484
Score = 37 (18.1 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 373 LIRTAVYGYVLFHILRFMK 391
+I A+ GY++F R +K
Sbjct: 259 VIPYAIIGYLIFRTFRSIK 277
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 343 (125.8 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 112/345 (32%), Positives = 165/345 (47%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ D V+ +EE+ E+V FL++P+ F +G + PRGVL+ G GTGKT LA A+A E
Sbjct: 264 VRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGE 323
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTK 571
A VP + + + ++VG A VRELF AR AP IIF+++ D GQ + +
Sbjct: 324 ANVPFFFMSGSQFDE-MYVGVGAKRVRELFAAARKQAPSIIFIDELDAI----GQKRNAR 378
Query: 572 QQDH-ESFINQLLVELDGFEKQDG----VVLMATTRNIKQIDEALQRPGRMDRIFNLQKP 626
H +NQLLV+LDGF K + VV + T + +D AL RPGR DR ++ P
Sbjct: 379 DAAHMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLP 438
Query: 627 TQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLVPVALEGSAFRSKFLD 686
R L I Q T L VD +A T+ +L + + + + SK L
Sbjct: 439 DVRGR---LAILLQHTRHVPLGKDVDLSIIARGTSGFAGADL--ANLINQAAVYASKNLS 493
Query: 687 TDELMSYCGWFATFSGVVPKWFRKTKIVKKISRMLVD-HLG----LTL-TKEDLQNVVDL 740
T M W + ++ RK+ + ++++ H G + L TK ++
Sbjct: 494 TAVSMRDLEW--SKDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMRPYKAT 551
Query: 741 MEPYGQISNGIELLTPPLD---WTRETKLPHA-VWAAGRGLIALL 781
+ P G S G+ + P +D WTRE L V GR LL
Sbjct: 552 IMPRGS-SLGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELL 595
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 359 (131.4 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 94/256 (36%), Positives = 136/256 (53%)
Query: 417 AYFNYRVRR----IKRKKKAGIDPIKNAFERMKRVKNPPIPLK--DFASVESMREEINEV 470
A+ Y +RR I R + G+ + + E +V I +K D A E + EI E
Sbjct: 266 AFLLYTIRRGPAGIGRTGR-GMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEF 324
Query: 471 VAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQE-LEAGLW 529
V FL+NP +Q++GA+ P+G ++ G GTGKT LA A A EA VP + V E LE ++
Sbjct: 325 VNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE--MF 382
Query: 530 VGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGF 589
VG + VR+LF AR AP I+F+++ D RG+ Q + E+ +NQLLVE+DGF
Sbjct: 383 VGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGF 442
Query: 590 EKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELID 649
VV++A T +D AL RPGR DR + P R I ++ + +L
Sbjct: 443 NTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPL---KLDS 499
Query: 650 LVDWRKVAEKTALLRP 665
++ K+A K A L P
Sbjct: 500 ALEKEKLARKLASLTP 515
Score = 40 (19.1 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 364 DDLNWSIWFLIRTAVYGYVLFHIL 387
DD + ++FL +G V+F+ L
Sbjct: 140 DDKEFRMYFLWTALFWGGVMFYFL 163
Score = 38 (18.4 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 658 EKTALLRPIELKLVPVALEGSAFRSKFLD-TDELM 691
+KT +L+P E K V G A +L+ D L+
Sbjct: 559 KKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLL 593
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 355 (130.0 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 94/256 (36%), Positives = 136/256 (53%)
Query: 417 AYFNYRVRR----IKRKKKAGIDPIKNAFERMKRVKNPPIPLK--DFASVESMREEINEV 470
A+ Y +RR I R + G+ + + E +V I +K D A E + EI E
Sbjct: 264 AFLLYTIRRGPAGIGRTGR-GMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEF 322
Query: 471 VAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQE-LEAGLW 529
V FL+NP +Q++GA+ P+G ++ G GTGKT LA A A EA VP + V E LE ++
Sbjct: 323 VNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE--MF 380
Query: 530 VGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGF 589
VG + VR+LF AR AP I+F+++ D RG+ Q + E+ +NQLLVE+DGF
Sbjct: 381 VGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGF 440
Query: 590 EKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELID 649
VV++A T +D AL RPGR DR + P R I ++ + +L
Sbjct: 441 NTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPL---KLDS 497
Query: 650 LVDWRKVAEKTALLRP 665
++ K+A K A L P
Sbjct: 498 ALEKDKLARKLASLTP 513
Score = 38 (18.4 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 658 EKTALLRPIELKLVPVALEGSAFRSKFLD-TDELM 691
+KT +L+P E K V G A +L+ D L+
Sbjct: 557 KKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLL 591
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 355 (130.0 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 94/256 (36%), Positives = 136/256 (53%)
Query: 417 AYFNYRVRR----IKRKKKAGIDPIKNAFERMKRVKNPPIPLK--DFASVESMREEINEV 470
A+ Y +RR I R + G+ + + E +V I +K D A E + EI E
Sbjct: 264 AFLLYTIRRGPAGIGRTGR-GMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEF 322
Query: 471 VAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQE-LEAGLW 529
V FL+NP +Q++GA+ P+G ++ G GTGKT LA A A EA VP + V E LE ++
Sbjct: 323 VNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE--MF 380
Query: 530 VGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGF 589
VG + VR+LF AR AP I+F+++ D RG+ Q + E+ +NQLLVE+DGF
Sbjct: 381 VGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGF 440
Query: 590 EKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELID 649
VV++A T +D AL RPGR DR + P R I ++ + +L
Sbjct: 441 NTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPL---KLDS 497
Query: 650 LVDWRKVAEKTALLRP 665
++ K+A K A L P
Sbjct: 498 ALEKDKLARKLASLTP 513
Score = 38 (18.4 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 658 EKTALLRPIELKLVPVALEGSAFRSKFLD-TDELM 691
+KT +L+P E K V G A +L+ D L+
Sbjct: 557 KKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLL 591
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 344 (126.2 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 75/187 (40%), Positives = 106/187 (56%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ KD A E + EI E V FL+NP + ++GA+ P+G ++ G GTGKT LA A A E
Sbjct: 325 VGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 384
Query: 512 ARVPVVNVEAQE-LEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT 570
A VP + V E LE ++VG S VR++F AR AP I+F+++ D RG
Sbjct: 385 ANVPFITVSGSEFLE--MFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFG 442
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
+ E+ +NQLLVE+DGF VV++A T + +D+AL RPGR DR + P
Sbjct: 443 GHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKG 502
Query: 631 REKILRI 637
R I ++
Sbjct: 503 RASIFKV 509
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 355 (130.0 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 94/256 (36%), Positives = 136/256 (53%)
Query: 417 AYFNYRVRR----IKRKKKAGIDPIKNAFERMKRVKNPPIPLK--DFASVESMREEINEV 470
A+ Y +RR I R + G+ + + E +V I +K D A E + EI E
Sbjct: 265 AFLLYTIRRGPAGIGRTGR-GMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEF 323
Query: 471 VAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQE-LEAGLW 529
V FL+NP +Q++GA+ P+G ++ G GTGKT LA A A EA VP + V E LE ++
Sbjct: 324 VNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE--MF 381
Query: 530 VGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGF 589
VG + VR+LF AR AP I+F+++ D RG+ Q + E+ +NQLLVE+DGF
Sbjct: 382 VGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGF 441
Query: 590 EKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELID 649
VV++A T +D AL RPGR DR + P R I ++ + +L
Sbjct: 442 NTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPL---KLDS 498
Query: 650 LVDWRKVAEKTALLRP 665
++ K+A K A L P
Sbjct: 499 TLEKDKLARKLASLTP 514
Score = 43 (20.2 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 364 DDLNWSIWFLIRTAVYGYVLFHILRFMKR 392
DD ++ ++FL +G V+F++L +KR
Sbjct: 139 DDKDFRMFFLWTALFWGGVMFYLL--LKR 165
Score = 38 (18.4 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 658 EKTALLRPIELKLVPVALEGSAFRSKFLD-TDELM 691
+KT +L+P E K V G A +L+ D L+
Sbjct: 558 KKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLL 592
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 319 (117.4 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 82/257 (31%), Positives = 141/257 (54%)
Query: 434 IDPIKNAFE-RMKRVKNPPIPLKDFASVESMREEINEVVAFLQNP----SAFQEMGARAP 488
+D + + F+ R+K ++ P + ++ V + ++I E+V + P F++MG RAP
Sbjct: 156 LDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAP 215
Query: 489 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLA 548
+G L+ G GTGKT LA A AA+ + + A +L +++G+ A VR+ F A++ A
Sbjct: 216 KGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQL-VQMYIGEGAKLVRDAFALAKEKA 274
Query: 549 PVIIFVEDFDLFAGVRGQFIHTKQQDHE--SFINQLLVELDGFEKQDGVVLMATTRNIKQ 606
P IIF+++ D G + +F K D E + +LL +LDGF D V ++A T +
Sbjct: 275 PTIIFIDELDAI-GTK-RFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDV 332
Query: 607 IDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQE-TMDEELIDLVDWRKVAEKTALLRP 665
+D AL R GR+DR P++ R +IL+I +++ T D++ ++W+++A T
Sbjct: 333 LDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDD----INWQELARSTDEFNG 388
Query: 666 IELKLVPVALEGSAFRS 682
+LK V V A R+
Sbjct: 389 AQLKAVTVEAGMIALRN 405
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 359 (131.4 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 94/256 (36%), Positives = 136/256 (53%)
Query: 417 AYFNYRVRR----IKRKKKAGIDPIKNAFERMKRVKNPPIPLK--DFASVESMREEINEV 470
A+ Y +RR I R + G+ + + E +V I +K D A E + EI E
Sbjct: 266 AFLLYTIRRGPAGIGRTGR-GMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEF 324
Query: 471 VAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQE-LEAGLW 529
V FL+NP +Q++GA+ P+G ++ G GTGKT LA A A EA VP + V E LE ++
Sbjct: 325 VNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE--MF 382
Query: 530 VGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGF 589
VG + VR+LF AR AP I+F+++ D RG+ Q + E+ +NQLLVE+DGF
Sbjct: 383 VGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGF 442
Query: 590 EKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELID 649
VV++A T +D AL RPGR DR + P R I ++ + +L
Sbjct: 443 NTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPL---KLDS 499
Query: 650 LVDWRKVAEKTALLRP 665
++ K+A K A L P
Sbjct: 500 TLEKEKLARKLASLTP 515
Score = 38 (18.4 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 364 DDLNWSIWFLIRTAVYGYVLFHIL 387
DD + ++FL +G LF+ L
Sbjct: 140 DDKEFKMYFLWTALFWGGFLFYFL 163
Score = 38 (18.4 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 658 EKTALLRPIELKLVPVALEGSAFRSKFLD-TDELM 691
+KT +L+P E K V G A +L+ D L+
Sbjct: 559 KKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLL 593
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 355 (130.0 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 85/216 (39%), Positives = 119/216 (55%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ KD A E + EI E V FL+NP +Q++GA+ P+G ++ G GTGKT LA A A E
Sbjct: 300 VKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGE 359
Query: 512 ARVPVVNVEAQE-LEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT 570
A VP + V E LE ++VG + VR+LF AR AP I+F+++ D RG+
Sbjct: 360 ANVPFITVNGSEFLE--MFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKRGRGNFG 417
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
Q + E+ +NQLLVE+DGF VV++A T +D AL RPGR DR + P
Sbjct: 418 GQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPDIKG 477
Query: 631 REKILRIAAQET-MDEELIDLVDWRKVAEKTALLRP 665
R I ++ + ++ EL D +A K A L P
Sbjct: 478 RASIFKVHLRPLKLEAEL----DKEALARKMAALTP 509
Score = 41 (19.5 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 658 EKTALLRPIELKLVPVALEGSAFRSKFLD-TDELM 691
+KT +L+P E K V G A FL+ D L+
Sbjct: 553 KKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLL 587
Score = 39 (18.8 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 15/68 (22%), Positives = 26/68 (38%)
Query: 902 TKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLMDSNGGIREKEPFF 961
T+V + AY + +++L + E+L D+ L+ K PF
Sbjct: 694 TEVRNLISTAYERTQQLLSDKKPEVEKVALRLLEKEVLDKNDMVELLG-------KRPF- 745
Query: 962 LSKVDYQE 969
K Y+E
Sbjct: 746 AEKSTYEE 753
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 340 (124.7 bits), Expect = 3.3e-27, P = 3.3e-27
Identities = 75/190 (39%), Positives = 107/190 (56%)
Query: 449 NPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
N + D A E + EI E V FL+NP +Q++GA+ P+G ++ G GTGKT LA A
Sbjct: 294 NIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKAT 353
Query: 509 AAEARVPVVNVEAQE-LEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQF 567
A EA VP + V E LE ++VG + VR++F AR AP I+F+++ D RG+
Sbjct: 354 AGEANVPFITVNGSEFLE--MFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRG 411
Query: 568 IHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPT 627
Q + E+ +NQ+LVE+DGF VV++A T +D AL RPGR DR + P
Sbjct: 412 HLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPD 471
Query: 628 QSEREKILRI 637
R I ++
Sbjct: 472 IKGRSSIFKV 481
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 354 (129.7 bits), Expect = 4.4e-27, Sum P(3) = 4.4e-27
Identities = 83/215 (38%), Positives = 119/215 (55%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ KD A E + EI E V FL+NP ++++GA+ P+G ++ G GTGKT LA A A E
Sbjct: 305 VKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGE 364
Query: 512 ARVPVVNVEAQE-LEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT 570
A VP + V E LE ++VG + VR+LF AR AP I+F+++ D RG+
Sbjct: 365 ANVPFITVNGSEFLE--MFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFG 422
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
Q + E+ +NQLLVE+DGF VV++A T +D AL RPGR DR + P
Sbjct: 423 GQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKG 482
Query: 631 REKILRIAAQETMDEELIDLVDWRKVAEKTALLRP 665
R I ++ + +L ++D +A K A L P
Sbjct: 483 RASIFKVHLRPL---KLDTVLDKDNLARKLASLTP 514
Score = 41 (19.5 bits), Expect = 4.4e-27, Sum P(3) = 4.4e-27
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 658 EKTALLRPIELKLVPVALEGSAFRSKFLD-TDELM 691
+KT +L+P E K V G A FL+ D L+
Sbjct: 558 KKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLL 592
Score = 37 (18.1 bits), Expect = 4.4e-27, Sum P(3) = 4.4e-27
Identities = 10/27 (37%), Positives = 10/27 (37%)
Query: 128 HGWKAWREEAKADLKRRLLEDV--DFG 152
H W W D R LE V D G
Sbjct: 208 HEWYVWFNIGSVDTFERNLETVQQDLG 234
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 301 (111.0 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 67/185 (36%), Positives = 102/185 (55%)
Query: 451 PIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAA 510
P D ++ ++EE+ E+V +L +P+ + +GA+ P+GVL+ GE GTGKT LA AIA
Sbjct: 296 PTSFDDVKGIQEVKEELEEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKTLLARAIAG 355
Query: 511 EARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT 570
EA V + + +VG + VRELF AR+ P IIF+++ D R H
Sbjct: 356 EAGVSFLYTTGSSFDEK-YVGVGSRRVRELFNAAREKQPCIIFIDEIDAVGKSRNTAHH- 413
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
+E+ + QLL E+DGFE ++++ T +D AL RPGR DR ++ P
Sbjct: 414 ----NETLL-QLLTEMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKG 468
Query: 631 REKIL 635
R +I+
Sbjct: 469 RSEII 473
Score = 86 (35.3 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 34/154 (22%), Positives = 64/154 (41%)
Query: 804 TKITKAEKEGSMSGNPE------SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSE 855
T + + + G +S PE +R + +L C AA ++ FG + + S SS+
Sbjct: 577 TIVQRGQALGMVSQLPEMDHVQYTRKQMMARLAICLAGRAAEEIF--FGVDGVTSGASSD 634
Query: 856 IKQAQEIATRMVLQYGWGPDDXXXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKA 915
+QA +A M+ + WG D + +V+ + D Y +
Sbjct: 635 FQQASSLAFSMITK--WGMSDKVGFIYHKDKTSPEVQKIIED-----EVKDLLDKQYQYS 687
Query: 916 KEMLQKNRXXXXXXXXXXXXYEILTGKDLERLMD 949
KE++ KNR E LTG+++ ++++
Sbjct: 688 KELIIKNRDNMEKLVGQLLEKETLTGEEILKILN 721
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 336 (123.3 bits), Expect = 9.9e-27, P = 9.9e-27
Identities = 76/223 (34%), Positives = 121/223 (54%)
Query: 439 NAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGER 497
+A + V+ P + +D +E ++ E+ E V + + +P FQ+ G RGVL G
Sbjct: 483 SALREVAVVEVPNVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPP 542
Query: 498 GTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDF 557
GTGKT LA A+A E ++V+ EL +W G+S SN+R++F AR AP ++F+++
Sbjct: 543 GTGKTMLAKAVANECAANFISVKGPEL-LSMWFGESESNIRDIFDKARAAAPCVVFLDEL 601
Query: 558 DLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRM 617
D A RG + + +NQLL E+DG + V ++ T +Q+D AL RPGR+
Sbjct: 602 DSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRL 661
Query: 618 DRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
D + + P Q+ RE IL+ ++T + VD +A KT
Sbjct: 662 DTLVYVPLPDQASREGILKAQLRKT---PVASDVDIEFIASKT 701
Score = 262 (97.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 68/206 (33%), Positives = 109/206 (52%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 226 DIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGA 285
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + + G+S SN+R+ F+ A +P IIF+++ D A R + T +
Sbjct: 286 FFFLINGPEIMSKM-AGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK---TNGEV 341
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG + + VV+MA T ID AL+R GR DR ++ P + R +I
Sbjct: 342 ERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEI 401
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
L I T + +L + VD +A +T
Sbjct: 402 LSI---HTKNMKLGEDVDLETIAAET 424
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 323 (118.8 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
Identities = 68/183 (37%), Positives = 110/183 (60%)
Query: 455 KDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
+D A + ++E+ E V +L++P +Q +GA+ PRG L++G G GKT LA A+A EA+V
Sbjct: 341 RDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQV 400
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQ- 573
P +++ E + G A+ VR+LF+ + AP II++++ D R Q
Sbjct: 401 PFLSMNGSEFIEMIG-GLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGS 459
Query: 574 --DHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER 631
+ E +NQLLVE+DG ++GV+++A+T +D+AL RPGR DR + PT +ER
Sbjct: 460 SGESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAER 519
Query: 632 EKI 634
++I
Sbjct: 520 KEI 522
Score = 59 (25.8 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
Identities = 21/99 (21%), Positives = 45/99 (45%)
Query: 773 AGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFC 832
+G L+ +LPN D + + + P +G + T +E+ + S+ L K+
Sbjct: 610 SGHALVGWMLPNSDILLKVTIVPRTSLALGFAQYTPSEQ------HLYSKEELFDKMCMA 663
Query: 833 FGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYG 871
G AA L+ F + +++++ +IA + ++G
Sbjct: 664 LGGRAAENLV--FNRITTGAQNDLEKVTKIAYSQIKKFG 700
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 331 (121.6 bits), Expect = 4.6e-26, P = 4.6e-26
Identities = 85/231 (36%), Positives = 123/231 (53%)
Query: 434 IDPIKNAFERMKR---VKNPPIPLKDFASVESMREEIN-EVVAFLQNPSAFQEMGARAPR 489
+D IK KR + P D ++E +REE+ V+A ++ P + +G AP
Sbjct: 638 VDAIKVMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPS 697
Query: 490 GVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAP 549
GVL+ G G GKT LA AIA EA + ++V+ EL ++VG+S VR FQ AR+ AP
Sbjct: 698 GVLLCGPPGCGKTLLAKAIANEAGINFISVKGPEL-MNMYVGESERAVRACFQRARNSAP 756
Query: 550 VIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDE 609
+IF ++FD R +NQLL E+DG E++ GV ++A T ID
Sbjct: 757 CVIFFDEFDSLCPKRSDG-GDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDP 815
Query: 610 ALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
A+ RPGR+D I + P QSER +IL+ + L D VD ++A +T
Sbjct: 816 AILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQT 866
Score = 271 (100.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 67/224 (29%), Positives = 125/224 (55%)
Query: 441 FERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTG 500
F+R V++P +D ++S +E+ E++ +++P + ++G RG+L+ G G G
Sbjct: 237 FKRDLEVQHPTESFRDIGGMDSTLKELCEMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCG 296
Query: 501 KTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLF 560
KT LA AI+ + ++P++ + A EL G+ G+S +RE+F A +P ++F+++ D
Sbjct: 297 KTFLARAISGQLKMPLMEIPATELIGGI-SGESEERIREVFDQAIGYSPCVLFIDEIDAI 355
Query: 561 AGVRGQFIHTKQQDHESFINQLLVELDGFEKQD---GVVLMATTRNIKQIDEALQRPGRM 617
G R Q+ +K + ++QL+ LD + + VV++A T +D L+R GR
Sbjct: 356 GGNR-QWA-SKDMERR-IVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRF 412
Query: 618 DRIFNLQKPTQSEREKILRIAAQE-TMDEELIDLVDWRKVAEKT 660
D + P++ ER +ILRI + ++D +L ++ K+AE T
Sbjct: 413 DHEIAIHIPSRKERREILRIQCEGLSVDPKL----NYDKIAELT 452
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 340 (124.7 bits), Expect = 6.0e-26, Sum P(2) = 6.0e-26
Identities = 86/227 (37%), Positives = 126/227 (55%)
Query: 443 RMKRVK-NPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGK 501
+ K VK KD A ++ +EEI E V+FL++PS ++++GAR P+G ++ G GTGK
Sbjct: 341 KSKAVKATSTTTFKDVAGMDEAKEEIMEFVSFLKDPSRYKKLGARIPKGAILSGPPGTGK 400
Query: 502 TSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLF- 560
T LA A A EA V + + ++VG S VR+LF+ AR P I+F+++ D
Sbjct: 401 TLLAKATAGEAGVNFYTISGSDF-IEMFVGVGPSRVRDLFKEARANTPCIVFIDEIDAVG 459
Query: 561 -AGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDR 619
A RG F H ++ E+ +NQLLVE+DGF GVV+ A T +D AL RPGR DR
Sbjct: 460 RARSRGGF-HNDER--ENTLNQLLVEMDGFSSTSGVVVFAGTNRSDVLDPALLRPGRFDR 516
Query: 620 IFNLQKPTQSEREKILRIAAQET-MDEELIDLVDWRKVAEKTALLRP 665
+ KP R+ I + + +D E+ ++A+K A L P
Sbjct: 517 QIYVGKPDIKGRKDIFMVHLKNIKLDGEM------EEIAKKLATLTP 557
Score = 39 (18.8 bits), Expect = 6.0e-26, Sum P(2) = 6.0e-26
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 63 KDSRELQRNLEARIRKNMKKLGNE 86
K+++E + N E K KK GN+
Sbjct: 157 KENKEEKENEEENKDKEDKKKGNQ 180
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 307 (113.1 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 84/241 (34%), Positives = 127/241 (52%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVL 492
+DP+ N MK K P ++ +EI EV+ +++P F+ +G P+GVL
Sbjct: 143 VDPLVNL---MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 199
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G GTGKT LA A+A + V EL ++G+ + VRELF AR+ AP II
Sbjct: 200 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKYIGEGSRMVRELFVMAREHAPSII 258
Query: 553 FVEDFDLFAGVRGQF-IHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEA 610
F+++ D R + + + + +LL +LDGFE + + VLMAT R I +D+A
Sbjct: 259 FMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNR-IDILDQA 317
Query: 611 LQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKL 670
L RPGR+DR P + R IL+I +++ L+ +D +K+AEK ELK
Sbjct: 318 LLRPGRIDRKIEFPNPNEESRFDILKIHSRKM---NLMRGIDLKKIAEKMNGASGAELKA 374
Query: 671 V 671
V
Sbjct: 375 V 375
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 307 (113.1 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 84/241 (34%), Positives = 127/241 (52%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVL 492
+DP+ N MK K P ++ +EI EV+ +++P F+ +G P+GVL
Sbjct: 143 VDPLVNL---MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 199
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G GTGKT LA A+A + V EL ++G+ + VRELF AR+ AP II
Sbjct: 200 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKYIGEGSRMVRELFVMAREHAPSII 258
Query: 553 FVEDFDLFAGVRGQF-IHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEA 610
F+++ D R + + + + +LL +LDGFE + + VLMAT R I +D+A
Sbjct: 259 FMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNR-IDILDQA 317
Query: 611 LQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKL 670
L RPGR+DR P + R IL+I +++ L+ +D +K+AEK ELK
Sbjct: 318 LLRPGRIDRKIEFPNPNEESRFDILKIHSRKM---NLMRGIDLKKIAEKMNGASGAELKA 374
Query: 671 V 671
V
Sbjct: 375 V 375
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 328 (120.5 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 84/243 (34%), Positives = 132/243 (54%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ D A + +R E+ E+V F + ++ G + P G+L+ G G GKT LA A+A E
Sbjct: 407 VKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGE 466
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTK 571
A V ++ A + ++VG AS VR L+Q AR+ AP ++F+++ D RG +
Sbjct: 467 AGVNFFSISASQF-VEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGSG 525
Query: 572 QQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER 631
Q+ ++ +NQLLV LDGFE + V+ +A+T +D AL RPGR DR + KP R
Sbjct: 526 GQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 585
Query: 632 EKILRI-AAQETMDEELIDLVDWRKVAEKTALLRPIEL-KLVPVALEGSAFRSKF-LDTD 688
+IL++ A ++ M E+L D+ VA T + EL +V +A + L TD
Sbjct: 586 MEILQVHARKKPMAEDL----DYMAVASMTDGMVGAELANIVEIAAINMMRDGRTELTTD 641
Query: 689 ELM 691
+L+
Sbjct: 642 DLL 644
Score = 54 (24.1 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 43/209 (20%), Positives = 82/209 (39%)
Query: 759 DWTRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAE---KEGSM 815
D + ET A+ A ++A+ P+ ++ L + P A +G ++ KEG +
Sbjct: 659 DRSLETWRQVAINEAAMAVVAVNFPDMKNIEFLTINPRAGRELGYVRVKMDHIKFKEGML 718
Query: 816 SGNPESRSYLEKKLVFCFGSYAAAQLLLPFGEENLLS--SSEIKQAQEIATRMVLQYGWG 873
S +S L+ + AA +L +GE+ L + + A+ A +VL G G
Sbjct: 719 S----RQSILDH-ITVQLAPRAADELW--YGEDQLSTIWAETSDNARSAARSLVL--G-G 768
Query: 874 PDDXXXXXXXXXXXXXXXXXXXHEYEMATKVEKVYDLAYYKAKEMLQKNRXXXXXXXXXX 933
D ++ + ++ ++ Y +AKE+L +NR
Sbjct: 769 LSDKHHGLNNFWVADRIN-------DIDVEALRILNMCYERAKEILGRNRTLMDEVVEKL 821
Query: 934 XXYEILTGKDLERLMDSNGGIREKEPFFL 962
+ LT ++ L++ G + P L
Sbjct: 822 VQKKSLTKQEFFTLVELYGSSKPMPPSIL 850
Score = 41 (19.5 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 18/81 (22%), Positives = 38/81 (46%)
Query: 53 DFALRIKQCLKDSRELQRNLEARIRKNMKKLGNEKRFVVRTP--ED---EVVKGFPEVEL 107
DF + K+ ++ +E + +E ++ K+ +KR VR E+ E K + ++
Sbjct: 234 DFKRQRKEEIETMKEERVMMEKTMKAQKKQQERKKRKAVRKKKYEESLREARKNYRDMAD 293
Query: 108 KWMFGDKEVVVPKAIGLHLYH 128
W ++ V A+GL ++
Sbjct: 294 MWARLAQDPNVATALGLVFFY 314
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 325 (119.5 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 78/223 (34%), Positives = 118/223 (52%)
Query: 450 PPIPLKDFASVESMREEINEVVAFLQ-NPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
P + D E ++ EI + V + Q +P AF+ G P G+L+ G G KT +A A+
Sbjct: 454 PNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARAL 513
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A+EA++ + V+ EL + WVG S +R+LF AR +AP I+F ++ D RG
Sbjct: 514 ASEAKMNFLAVKGPELFSK-WVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSEK 572
Query: 569 HTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+ D + QLL ELDG EK V+L+A T Q+D AL RPGR+DR + P +
Sbjct: 573 SSGVSDR--VLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLPCE 630
Query: 629 SEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLV 671
R IL + ++ ++ + +D K+ EKT+ EL V
Sbjct: 631 VTRRAILEMRTKKMKFDDTVRTID--KLVEKTSGYSGAELVAV 671
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 309 (113.8 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 79/256 (30%), Positives = 138/256 (53%)
Query: 434 IDPIKNAFE-RMKRVKNPPIPLKDFASVESMREEINE----VVAFLQNPSAFQEMGARAP 488
+D + + ++ R+K ++ P +D++ + + ++I E VV ++ F+ +G + P
Sbjct: 175 LDTLPSEYDSRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPP 234
Query: 489 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLA 548
+G L+ G GTGKT LA A AA++ + + A +L +++G A VR+ F A++ A
Sbjct: 235 KGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQL-VQMFIGDGAKLVRDAFALAKEKA 293
Query: 549 PVIIFVEDFDLFAGVRGQFIHTKQQDHE--SFINQLLVELDGFEKQDGVVLMATTRNIKQ 606
P IIF+++ D G + +F K D E + +LL +LDGF D V ++A T +
Sbjct: 294 PTIIFIDELDAI-GTK-RFDSDKSGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRVDT 351
Query: 607 IDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPI 666
+D AL R GR+DR P++ RE +L+I A++ + + V+WR++A T
Sbjct: 352 LDPALLRSGRLDRKIEFPLPSEEARESVLKIHARKLHCDN--NSVNWRELARSTDEFNGA 409
Query: 667 ELKLVPVALEGSAFRS 682
+LK V V A R+
Sbjct: 410 QLKAVTVEAGMIALRN 425
Score = 48 (22.0 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 23/89 (25%), Positives = 42/89 (47%)
Query: 4 SQENSVTKLSRSDIQEELESAQRKHLEQMILPSIVEVEDLGPLFYQDSLDFALRIKQCLK 63
SQ + T +S E+LE+ Q++ E +I I+ + LD +++ +
Sbjct: 14 SQLQNTTTVSTMVTLEDLENNQQQE-ENVIDQEILNSSTSDIINRTKLLDNDIKVMR--S 70
Query: 64 DSRELQRN----LEARIRKNMKKLGNEKR 88
+S+ L LE RI+ N +K+ N K+
Sbjct: 71 ESQRLNHEKTVMLE-RIKDNQEKINNNKQ 98
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 325 (119.5 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 73/223 (32%), Positives = 121/223 (54%)
Query: 439 NAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGER 497
+A + V+ P + +D ++ +++++ E V + + +P F + G RGVL G
Sbjct: 480 SALREVAVVEVPNVRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPP 539
Query: 498 GTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDF 557
GTGKT LA A+A E ++V+ EL +W G+S SN+R++F AR AP I+F+++
Sbjct: 540 GTGKTMLAKAVANECAANFISVKGPEL-LSMWFGESESNIRDIFDKARAAAPCIVFLDEL 598
Query: 558 DLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRM 617
D A RG + + +NQLL E+DG + V ++ T +Q+D AL RPGR+
Sbjct: 599 DSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRL 658
Query: 618 DRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
D + + P + R IL+ ++T + D VD + +A KT
Sbjct: 659 DSLIYVPLPDELGRLSILKAQLRKT---PVSDDVDLQYIANKT 698
Score = 272 (100.8 bits), Expect = 8.7e-20, P = 8.7e-20
Identities = 70/206 (33%), Positives = 111/206 (53%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P F+ +G + PRGVL+ G GTGKT +A A+A E
Sbjct: 223 DIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGA 282
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + + G+S SN+R+ F+ A +P IIF+++ D A R + T +
Sbjct: 283 FFFLINGPEIMSKM-AGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK---TNGEV 338
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG + + VV+MA T ID AL+R GR DR ++ P + R +I
Sbjct: 339 ERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEI 398
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
L+I T + +L D VD ++A +T
Sbjct: 399 LQI---HTKNMKLGDDVDLEQIAAET 421
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 311 (114.5 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 84/246 (34%), Positives = 124/246 (50%)
Query: 448 KNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLAL 506
K P D ES +E+ E V L +P ++EMG AP+GV++ GE GTGKT LA
Sbjct: 176 KTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAK 235
Query: 507 AIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQ 566
A+A + +L G+ A VR++FQ A++ AP I+F+++ D R
Sbjct: 236 AVANSTSATFIRATGSDL-VQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFD 294
Query: 567 FIHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+Q+ + + +LL +LDGFE + V ++MAT R I +D AL RPGR+DR L K
Sbjct: 295 TSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNR-IDSLDPALIRPGRIDRKIELPK 353
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLVPVALEGSAFRS--K 683
P + R+KI I T + V + V K + E+K V A R+ K
Sbjct: 354 PDEKTRQKIFTI---HTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRK 410
Query: 684 FLDTDE 689
+ TD+
Sbjct: 411 CVGTDD 416
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 319 (117.4 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 68/184 (36%), Positives = 105/184 (57%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
I KD A + + E+ E V +L+NP + ++GA+ P+G L++G G GKT LA A+A E
Sbjct: 279 IGFKDVAGMHEAKMEVKEFVDYLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 338
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT- 570
A+VP + + E + G A+ VR LF+ A+ AP I+++++ D R +
Sbjct: 339 AQVPFLAMAGSEFVEVIG-GLGAARVRSLFREAQARAPCIVYIDEIDAVGKKRSTNVSGF 397
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
+ E +NQLLVE+DG D V+++A+T +D AL RPGR+DR + PT E
Sbjct: 398 ANAEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHIFIDLPTLQE 457
Query: 631 REKI 634
R +I
Sbjct: 458 RREI 461
Score = 53 (23.7 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 35/179 (19%), Positives = 64/179 (35%)
Query: 773 AGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPESRSYLEKKLVFC 832
+G L+ LL + + V + + P +G +I E+ LE+ +
Sbjct: 549 SGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQILPREQYLFTK-----EQLLERMCMAL 603
Query: 833 FGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGPDDXXXXXXXXXXXXXXXX 892
G + A + F + + ++K+ +IA MV QYG P
Sbjct: 604 GGRVSEA---ITFNKVTTGAQDDLKRVTKIAYSMVKQYGMVPSIGQISFPDGESTVGIGR 660
Query: 893 XXXHE--YEMATKVEKVYDL-AYYKAKEMLQKNRXXXXXXXXXXXXYEILTGKDLERLM 948
+ +M KV AY + +++L NR E++ D+E L+
Sbjct: 661 RPFSQGLQQMMDHEAKVLVAQAYRRTEKLLLDNRDKLQTLSNALLEKEVINYDDIEALI 719
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 315 (115.9 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 68/184 (36%), Positives = 105/184 (57%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ KD A + + E+ E V +L++P F ++GA+ P+G L++G G GKT LA A+A E
Sbjct: 306 VSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 365
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT- 570
A+VP + + E + G A+ VR LF+ AR AP I+++++ D R +
Sbjct: 366 AQVPFLAMAGPEFVEVIG-GLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
+ E +NQLLVE+DG D V+++A+T +D AL RPGR+DR + PT E
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQE 484
Query: 631 REKI 634
R +I
Sbjct: 485 RREI 488
Score = 51 (23.0 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 819 PESRSYLEKKLVF---CFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGP 874
P + K+ +F C A L F E + ++++ IA MV Q+G P
Sbjct: 611 PRDQHLFTKEQLFERMCMALGGRASEALSFNEVTSGAQDDLRKVTRIAYSMVKQFGMAP 669
Score = 44 (20.5 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 272 LLIVRLAYLSLNGLWKTGTVSFWRDLILENVRNTNDDIMMMIVFPLLDCIIPY 324
LL++ + LN L +G W D + E + ++ + V P D + Y
Sbjct: 145 LLVIAVVMSLLNALSTSGGSISWNDFVHEML--AKGEVQRVQVVPESDVVEVY 195
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 315 (115.9 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 71/213 (33%), Positives = 116/213 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P D +ES+++E+ E+V + +++P F + G + RGVL G G GKT LA
Sbjct: 466 VEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLA 525
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++V+ EL +W G+S +NVR++F AR AP ++F ++ D A RG
Sbjct: 526 KAIANECQANFISVKGPELLT-MWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARG 584
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 585 GNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 644
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDWRKVAE 658
P RE IL+ +++ + +DL KV +
Sbjct: 645 PDDKSREAILKANLRKSPLAKEVDLTYIAKVTQ 677
Score = 283 (104.7 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 75/227 (33%), Positives = 120/227 (52%)
Query: 435 DPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
DPIK E + N + D +I E+V L++PS F+ +G + PRG+L+
Sbjct: 184 DPIKR--EEEEESLNA-VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILM 240
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G GTGKT +A A+A E + E+ + L G+S SN+R+ F+ A +P IIF
Sbjct: 241 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKL-AGESESNLRKAFEEAEKNSPAIIF 299
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQR 613
+++ D A R + T + ++QLL +DG +K +++MA T ID AL+R
Sbjct: 300 IDEIDAIAPKRDK---THGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRR 356
Query: 614 PGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
GR DR ++ P + R ++LRI T + +L D VD ++A ++
Sbjct: 357 FGRFDREIDIGIPDATGRLEVLRI---HTKNMKLHDDVDLEQIAAES 400
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 314 (115.6 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 79/224 (35%), Positives = 120/224 (53%)
Query: 452 IPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAA 510
+ L D + + ++ + E V + LQ+P F +G PRGVL+ G G GKT + A+A+
Sbjct: 461 VTLDDVGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVLLYGPPGCGKTFVVRALAS 520
Query: 511 EARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT 570
++ V V+ EL WVG S VRELF+ ARD AP ++F+++ D A RGQ +
Sbjct: 521 TGQLSVHAVKGSEL-MDKWVGSSEKAVRELFRRARDSAPSLVFLDELDALAPRRGQSFDS 579
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
D + LL ELDG + VV++ T ID AL RPGR++R+ ++ P +
Sbjct: 580 GVSDR--VVAALLTELDGIDPLRDVVMLGATNRPDLIDPALLRPGRLERLVFVEPPDAAA 637
Query: 631 REKILRIAAQE---TMDEELIDL---VDWRKVAEKTALLRPIEL 668
R +ILR A + + D +L ++ +D A+ ALLR L
Sbjct: 638 RREILRTAGKSIPLSSDVDLDEVAAGLDGYSAADCVALLREAAL 681
Score = 139 (54.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 65/252 (25%), Positives = 102/252 (40%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
+ +P I +++ + ++ E + L P Q +GA GVL+ G G GK +L
Sbjct: 205 ISSPEIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLV 264
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+ R+ V ++ E+ A L G V Q R V++ + D D
Sbjct: 265 RAVCDGRRL--VTLDGPEIGA-LAAGDRVKAVASAVQAVRHEGGVLL-ITDADALLPAAA 320
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
E + +L EL GVVL+AT+ Q+D L+ P DR L
Sbjct: 321 ----------EPVASLILSELRTAVATAGVVLIATSARPDQLDARLRSPELCDRELGLPL 370
Query: 626 PTQSEREKILRIAAQETMDEEL-IDLVDWRK----VAEKTALLRPIELKLVPVALEGSAF 680
P + R+ +L +L +D + R VA+ AL+R L+ A SA
Sbjct: 371 PDAATRKSLLEALLNPVPTGDLNLDEIASRTPGFVVADLAALVREAALR---AASRASAD 427
Query: 681 -RSKFLDTDELM 691
R L D+L+
Sbjct: 428 GRPPMLHQDDLL 439
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 285 (105.4 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 76/229 (33%), Positives = 124/229 (54%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFAS-VESMREEINEVVAF-LQNPSAFQEMGARAPRGV 491
+DP+ + + V+ P D ++ +EI EV+ +++P F+ +G P+GV
Sbjct: 126 VDPLVS----LMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGV 181
Query: 492 LIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVI 551
++ G GTGKT LA A+A + V EL ++G+ + VRELF AR+ AP I
Sbjct: 182 ILYGPPGTGKTLLARAVAHHTECKFIRVSGSEL-VQKYIGEGSRMVRELFVMAREHAPSI 240
Query: 552 IFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEA 610
IF+++ D R + + + + +LL +LDGFE + ++MAT R + +D A
Sbjct: 241 IFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNR-LDILDPA 299
Query: 611 LQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEK 659
L RPGR+DR PT + R IL+I ++ +M+ L ++ RK+AEK
Sbjct: 300 LLRPGRIDRKIEFPAPTVAARTDILKIHSR-SMN--LTRGINLRKIAEK 345
Score = 53 (23.7 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 36 SIVEVEDLGPLFYQDSLDFALRIKQCLKDSREL--QRNLEARIRKNMKKLGNEKRFVVRT 93
S V + P F Q D +RI+Q ++ R L QRN ++ +++L +E + +++
Sbjct: 8 SYVHEGGIRPYFEQQIQDTEIRIQQTTQNLRRLEAQRN---KLNNKVRQLKDELK-LLQE 63
Query: 94 PED---EVVK--GFPEVELK 108
P EVVK G +V +K
Sbjct: 64 PGSYVGEVVKVMGLKKVLVK 83
Score = 38 (18.4 bits), Expect = 8.3e-23, Sum P(2) = 8.3e-23
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 408 NFRKLRRVKAYFNYRVRRIKRKKKAGIDP 436
N R+L + N +VR++K + K +P
Sbjct: 36 NLRRLEAQRNKLNNKVRQLKDELKLLQEP 64
Score = 38 (18.4 bits), Expect = 8.3e-23, Sum P(2) = 8.3e-23
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 76 IRKNMKKLGNEKRFVVRTPED-EVVKGFPEVEL 107
++K + K+ E +F+V +D +V K P + +
Sbjct: 77 LKKVLVKIHPEGKFIVNVTKDIDVKKLTPSIRV 109
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 314 (115.6 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 80/255 (31%), Positives = 132/255 (51%)
Query: 431 KAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPR 489
+A + IK + R ++ P + D +R + + + + L + FQ +G + PR
Sbjct: 511 QAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPR 570
Query: 490 GVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAP 549
G+L+ G G KT +A A+A E+++ ++++ EL + +WVG+S VRE+F+ AR +AP
Sbjct: 571 GILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFS-MWVGESERAVREVFRKARQVAP 629
Query: 550 VIIFVEDFDLFAGVR--GQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQI 607
I+F ++ D G R G + E + QLL ELDG E V ++A T I
Sbjct: 630 AIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMI 689
Query: 608 DEALQRPGRMDRIFNLQKPTQSEREKILRIAAQ-----ETMD-EELIDLVDWRKVAEKTA 661
D+AL RPGR+DRI + P R +IL+I + +D E+L+ L + AE A
Sbjct: 690 DKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQA 749
Query: 662 LLRPIELKLVPVALE 676
+ L+ + + E
Sbjct: 750 VCHEAALRALEQSFE 764
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 320 (117.7 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 68/184 (36%), Positives = 106/184 (57%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ KD A + + E+ E V +L+NP + ++GA+ P+G L++G G GKT LA A+A E
Sbjct: 297 VSFKDVAGMREAKMEVKEFVDYLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVATE 356
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT- 570
A+VP + + E + G A+ VR LF+ AR AP I+++++ D R +
Sbjct: 357 AQVPFLAMAGSEFVEVIG-GLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTNMSGF 415
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
+ E +NQLLVE+DG D V+++A+T +D AL RPGR+DR + PT E
Sbjct: 416 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTLQE 475
Query: 631 REKI 634
R++I
Sbjct: 476 RKEI 479
Score = 43 (20.2 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 20/111 (18%), Positives = 47/111 (42%)
Query: 761 TRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPE 820
++E + A +G L+ LL + + V + + P +G +I ++
Sbjct: 555 SKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQILPRDQFLF------ 608
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYG 871
++ L +++ G A+ + F + + ++++ +A MV QYG
Sbjct: 609 TKEQLFERMCMALGGRASEAIT--FNKVTTGAQDDLRKVTRVAYSMVKQYG 657
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 291 (107.5 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 69/209 (33%), Positives = 113/209 (54%)
Query: 450 PPIPLKDFASVESMREEIN-EVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
P + D +++ +REE++ ++A +QNP F+ +G AP G+L+ G G GKT LA A+
Sbjct: 515 PDVTWADVGALQDVREELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAV 574
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A + + ++V+ EL ++VG+S VR++FQ R+ AP +IF ++ D R +
Sbjct: 575 ANASGLNFISVKGPEL-LNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSE-- 631
Query: 569 HTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
H +NQLL E+DG E + V +MA T ID A+ RPGR+D+ + P
Sbjct: 632 HESGASVR-VVNQLLTEMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPA 690
Query: 629 SEREKILRIAAQETMDEELIDLVDWRKVA 657
++R IL + +L V ++A
Sbjct: 691 ADRHAILNTITKGGTKPQLDSDVSLEEIA 719
Score = 265 (98.3 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 72/233 (30%), Positives = 120/233 (51%)
Query: 432 AGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGV 491
AG+ P K + + ++ + +DF + EE+ +++ +++P +Q +G PRG
Sbjct: 205 AGV-PAKKSKVKGFELQFSSVKFEDFGGSDETLEEVCKLLIHMRHPEVYQRLGVVPPRGF 263
Query: 492 LIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVI 551
L+ G G GKT LA A+A E +P++ + A EL +G+ G+S +RELF+ A AP I
Sbjct: 264 LLHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGV-SGESEQKLRELFEQAISSAPCI 322
Query: 552 IFVEDFDLFAGVRGQFIHTKQQDHES-FINQLLV---ELDGFEKQDGVVLMATTRNIKQI 607
+F+++ D R T +D E + QLL +L+ + V+++ T +
Sbjct: 323 LFIDEIDAITPKR----ETASKDMERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSL 378
Query: 608 DEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
D AL+R GR DR L P + R KIL+ ++ L D D+R +A T
Sbjct: 379 DPALRRAGRFDREICLGIPDEGARMKILKTLCRKI---RLPDDFDFRHLARLT 428
Score = 73 (30.8 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 43/152 (28%), Positives = 67/152 (44%)
Query: 137 AKADLKRRLLEDVDFGKQYVAQR-QERILLDR-DRVVSKTWYNEDKSRWEMDPVAVPYA- 193
+ + ++R L +D K R QE IL+D + S T D SR E + +V
Sbjct: 134 SSSTIQRSLSDDWIIDK--TGDRGQESILIDLCEEESSSTTNQRDSSRLEKEKKSVKQKR 191
Query: 194 -VSNKIVESARIRHDWGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDELYMKMLACGIP 252
NK+ E + A +KG + +F V FEDFGG DE ++ C +
Sbjct: 192 QKKNKLEEDSETSAGVPAKKSKVKGFELQFS------SVKFEDFGGSDETLEEV--CKL- 242
Query: 253 TAVHVMRIPFSELDFYQQFLLIVRLAYLSLNG 284
+H MR P + YQ+ ++ +L L+G
Sbjct: 243 -LIH-MRHP----EVYQRLGVVPPRGFL-LHG 267
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 328 (120.5 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 74/207 (35%), Positives = 113/207 (54%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ D A ++ +E+ E+V +L+NP F +MG + P GVL+ G G GKT +A AIA E
Sbjct: 427 VKFADVAGIDEAVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGE 486
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFA----GV---- 563
A VP + E L VG ++ +R+LF+ A+ P +IF+++ D A G+
Sbjct: 487 AGVPFYQMAGSEFVEVL-VGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKEN 545
Query: 564 RGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNL 623
Q + Q+ E+ +NQLL+ELDGF+ GV+ + T +D AL RPGR DR +
Sbjct: 546 SDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRV 605
Query: 624 QKPTQSEREKILRIAAQETMDEELIDL 650
+ P R IL+I A + + +DL
Sbjct: 606 RPPNAKGRLDILKIHASKVKMSDSVDL 632
Score = 37 (18.1 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 5/24 (20%), Positives = 15/24 (62%)
Query: 745 GQISNGIELLTPPLDWTRETKLPH 768
G + + +L+ PP+++ + ++ H
Sbjct: 829 GSLYDDYDLVEPPVNFNMDDEVAH 852
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 317 (116.6 bits), Expect = 3.5e-24, Sum P(3) = 3.5e-24
Identities = 68/184 (36%), Positives = 105/184 (57%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ KD A + + E+ E V +L++P F ++GA+ P+G L++G G GKT LA A+A E
Sbjct: 306 VSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 365
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT- 570
A+VP + + E + G A+ VR LF+ AR AP I+++++ D R +
Sbjct: 366 AQVPFLAMAGPEFVEVIG-GLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTAVSGF 424
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
+ E +NQLLVE+DG D V+++A T +D AL RPGR+DR + PT E
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLAATNRADILDNALLRPGRLDRHVFIDLPTLQE 484
Query: 631 REKI 634
R++I
Sbjct: 485 RKEI 488
Score = 49 (22.3 bits), Expect = 3.5e-24, Sum P(3) = 3.5e-24
Identities = 21/114 (18%), Positives = 48/114 (42%)
Query: 761 TRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPE 820
++E + A +G L+ LL + + V + + P +G ++ ++ +
Sbjct: 564 SKEEQKVVAFHESGHALVGWLLEHTEAVMKVSITPRTNAALGFAQMLPRDQ------HLF 617
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGP 874
+R L +++ G A+ + F + ++++ IA MV Q+G P
Sbjct: 618 TREQLFERMCMALGGRASESI--SFNRVTSGAQDDLRKVTRIAYSMVKQFGMAP 669
Score = 40 (19.1 bits), Expect = 3.5e-24, Sum P(3) = 3.5e-24
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 272 LLIVRLAYLSLNGLWKTGTVSFWRDLILENVRNTNDDIMMMIVFPLLDCIIPY 324
L ++ + LN L +G W D + E + ++ + V P D + Y
Sbjct: 145 LFVIAVIMSLLNALGSSGGNISWNDFVHEML--AKGEVQRVQVVPESDVVEVY 195
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 307 (113.1 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 67/205 (32%), Positives = 112/205 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ E+V + +++P F + G +GVL G G GKT LA
Sbjct: 201 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 260
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 261 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 319
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
I + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 320 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 379
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P + R IL+ +++ + +DL
Sbjct: 380 PDEKSRVAILKANLRKSPVAKDVDL 404
Score = 178 (67.7 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 46/130 (35%), Positives = 73/130 (56%)
Query: 531 GQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFE 590
G+S SN+R+ F+ A AP IIF+++ D A R + T + ++QLL +DG +
Sbjct: 12 GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK---THGEVERRIVSQLLTLMDGLK 68
Query: 591 KQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDL 650
++ V++MA T ID AL+R GR DR ++ P + R +IL+I T + +L D
Sbjct: 69 QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQI---HTKNMKLADD 125
Query: 651 VDWRKVAEKT 660
VD +V +T
Sbjct: 126 VDLEQVGNET 135
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 316 (116.3 bits), Expect = 5.3e-24, Sum P(3) = 5.3e-24
Identities = 80/251 (31%), Positives = 132/251 (52%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ +D A + + E+ E V +L++P F ++GA+ P+G L++G G GKT LA A+A E
Sbjct: 306 VSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 365
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT- 570
A+VP + + E + G A+ VR LF+ AR AP I+++++ D R +
Sbjct: 366 AQVPFLAMAGPEFVEVIG-GLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGF 424
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
+ E +NQLLVE+DG D V+++A+T +D AL RPGR+DR + PT E
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQE 484
Query: 631 REKI-------LRIAAQETM-DEELIDLVD-WRKVAEKTALLRPIELKLVPVALEGSAFR 681
R +I L++ + + L +L + A+K+ +L E ++V G A
Sbjct: 485 RREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGTAKKSKILSKEEQRVVAFHESGHALV 544
Query: 682 SKFLD-TDELM 691
L+ T+ +M
Sbjct: 545 GWLLEHTEAVM 555
Score = 46 (21.3 bits), Expect = 5.3e-24, Sum P(3) = 5.3e-24
Identities = 21/114 (18%), Positives = 48/114 (42%)
Query: 761 TRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPE 820
++E + A +G L+ LL + + V + + P +G +++ ++
Sbjct: 527 SKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLF------ 580
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGP 874
++ L +++ G AA + F + ++++ IA MV Q+G P
Sbjct: 581 TKEQLFERMCMALGGRAAEAI--SFSRVTSGAQDDLRKVTRIAYSMVKQFGMAP 632
Score = 41 (19.5 bits), Expect = 5.3e-24, Sum P(3) = 5.3e-24
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 272 LLIVRLAYLSLNGLWKTGTVSFWRDLILENVRNTNDDIMMMIVFPLLDCIIPY 324
L I+ + LN L +G W D + E + ++ + V P D + Y
Sbjct: 145 LFIIAIVMSLLNSLSTSGGSISWADFVNEML--AKGEVQRVQVVPESDVVEVY 195
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 316 (116.3 bits), Expect = 5.3e-24, Sum P(3) = 5.3e-24
Identities = 80/251 (31%), Positives = 132/251 (52%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ +D A + + E+ E V +L++P F ++GA+ P+G L++G G GKT LA A+A E
Sbjct: 306 VSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 365
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT- 570
A+VP + + E + G A+ VR LF+ AR AP I+++++ D R +
Sbjct: 366 AQVPFLAMAGPEFVEVIG-GLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGF 424
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
+ E +NQLLVE+DG D V+++A+T +D AL RPGR+DR + PT E
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQE 484
Query: 631 REKI-------LRIAAQETM-DEELIDLVD-WRKVAEKTALLRPIELKLVPVALEGSAFR 681
R +I L++ + + L +L + A+K+ +L E ++V G A
Sbjct: 485 RREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGTAKKSKILSKEEQRVVAFHESGHALV 544
Query: 682 SKFLD-TDELM 691
L+ T+ +M
Sbjct: 545 GWLLEHTEAVM 555
Score = 46 (21.3 bits), Expect = 5.3e-24, Sum P(3) = 5.3e-24
Identities = 21/114 (18%), Positives = 48/114 (42%)
Query: 761 TRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPE 820
++E + A +G L+ LL + + V + + P +G +++ ++
Sbjct: 527 SKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLF------ 580
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGP 874
++ L +++ G AA + F + ++++ IA MV Q+G P
Sbjct: 581 TKEQLFERMCMALGGRAAEAI--SFSRVTSGAQDDLRKVTRIAYSMVKQFGMAP 632
Score = 41 (19.5 bits), Expect = 5.3e-24, Sum P(3) = 5.3e-24
Identities = 13/53 (24%), Positives = 22/53 (41%)
Query: 272 LLIVRLAYLSLNGLWKTGTVSFWRDLILENVRNTNDDIMMMIVFPLLDCIIPY 324
L I+ + LN L +G W D + E + ++ + V P D + Y
Sbjct: 145 LFIIAIVMSLLNSLSTSGGSISWADFVNEML--AKGEVQRVQVVPESDVVEVY 195
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 321 (118.1 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
Identities = 70/211 (33%), Positives = 114/211 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+N + D +++++ E+ E V + + +P +Q+ G +GVL G GTGKT LA
Sbjct: 480 VENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLA 539
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A E ++V+ EL +W G+S SN+R++F AR AP ++F+++ D A RG
Sbjct: 540 KAVATEVSANFISVKGPEL-LSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARG 598
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ +NQLL E+DG + V ++ T QID AL RPGR+D++ +
Sbjct: 599 GSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPL 658
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDWRKV 656
P + R IL+ + T E +DL + K+
Sbjct: 659 PDEPARLSILQAQLRNTPLEPGLDLNEIAKI 689
Score = 269 (99.8 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 68/206 (33%), Positives = 110/206 (53%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D + +I E+V L++P F+ +G + P+G+L+ G GTGKT +A A+A E
Sbjct: 216 DIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGA 275
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + + G+S SN+R+ F+ A +P IIF+++ D A R + T +
Sbjct: 276 FFFLINGPEIMSKM-AGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDK---TNGEV 331
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG + + VV++A T ID AL+R GR DR ++ P R +I
Sbjct: 332 ERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEI 391
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
LRI T + +L D VD +A +T
Sbjct: 392 LRI---HTKNMKLADDVDLEAIASET 414
Score = 39 (18.8 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 295 RDLILENVRNTNDDI 309
R+ ++ENV T DDI
Sbjct: 476 RETVVENVNVTWDDI 490
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 321 (118.1 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
Identities = 70/211 (33%), Positives = 114/211 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+N + D +++++ E+ E V + + +P +Q+ G +GVL G GTGKT LA
Sbjct: 480 VENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLA 539
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A E ++V+ EL +W G+S SN+R++F AR AP ++F+++ D A RG
Sbjct: 540 KAVATEVSANFISVKGPEL-LSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARG 598
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ +NQLL E+DG + V ++ T QID AL RPGR+D++ +
Sbjct: 599 GSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPL 658
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDWRKV 656
P + R IL+ + T E +DL + K+
Sbjct: 659 PDEPARLSILQAQLRNTPLEPGLDLNEIAKI 689
Score = 269 (99.8 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 68/206 (33%), Positives = 110/206 (53%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D + +I E+V L++P F+ +G + P+G+L+ G GTGKT +A A+A E
Sbjct: 216 DIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGA 275
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + + G+S SN+R+ F+ A +P IIF+++ D A R + T +
Sbjct: 276 FFFLINGPEIMSKM-AGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDK---TNGEV 331
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG + + VV++A T ID AL+R GR DR ++ P R +I
Sbjct: 332 ERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEI 391
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
LRI T + +L D VD +A +T
Sbjct: 392 LRI---HTKNMKLADDVDLEAIASET 414
Score = 39 (18.8 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 295 RDLILENVRNTNDDI 309
R+ ++ENV T DDI
Sbjct: 476 RETVVENVNVTWDDI 490
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 286 (105.7 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
Identities = 85/255 (33%), Positives = 130/255 (50%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
+Y + RI K IDP+ + MK K P ++ +EI EV+ +++P
Sbjct: 116 SYTLHRILPNK---IDPLVSL---MKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPE 169
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G+ + VR
Sbjct: 170 LFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKYIGEGSRMVR 228
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQF-IHTKQQDHESFINQLLVELDGFEKQDGV-V 596
ELF AR+ AP IIF+++ D RG+ + + + +LL +LDGFE + V
Sbjct: 229 ELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKV 288
Query: 597 LMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKV 656
LM T R I +D AL RPGR+DR P + R IL+I +++ L ++ +K+
Sbjct: 289 LMCTNR-IDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKM---NLTRGINLKKI 344
Query: 657 AEKTALLRPIELKLV 671
++K ELK V
Sbjct: 345 SDKMNGASGAELKAV 359
Score = 48 (22.0 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
Identities = 21/93 (22%), Positives = 44/93 (47%)
Query: 16 DIQEELESAQRKHLEQMILPSIVEVEDLGPLFYQDSLDFALRIKQCLKDSRELQRNLEAR 75
D + ++S +E++ + + +DL L Q + + R++ LK+ +L N +
Sbjct: 11 DETKGIKSYYCSKIEELEIKVNEKAQDLRRLEAQRN-ELNNRVRM-LKEELQLLTNPGSH 68
Query: 76 IRKNMKKLGNEKRFVVRTPEDEVVKGF-PEVEL 107
+ + +K +G K V PE + V P V++
Sbjct: 69 VAEVVKLMGKNKVLVKVNPEGKFVVDIDPTVDI 101
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 320 (117.7 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 87/277 (31%), Positives = 143/277 (51%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ D A E + EI E V FL+NP ++++GA+ P+G ++ G GTGKT LA A A E
Sbjct: 290 VKFADVAGCEEAKIEIMEFVNFLKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGE 349
Query: 512 ARVPVVNVEAQE-LEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG-QFIH 569
A VP + V E LE ++VG + VR++F AR +P I+F+++ D RG +
Sbjct: 350 ANVPFITVSGSEFLE--MFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGM 407
Query: 570 TKQQDHESFINQLLVELDGFEKQDG-VVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+ E+ +NQLLVE+DGF + V+++A T + +D AL RPGR DR + P
Sbjct: 408 GGHSEQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPGRFDRQIYVPVPDI 467
Query: 629 SEREKILRI---AAQETMDEELIDLVDWRKVAEKTALLRPIELKLVPVALEGSAFRSKFL 685
R I R+ + ++D+ ++ RK+A T ++ V E + ++
Sbjct: 468 KGRASIFRVHLGPLRTSLDKTVLS----RKLAAHTPGFSGADIS--NVCNEAALIAAR-- 519
Query: 686 DTDELMSYCGWFATFSGVVPKWFRKTKIVKKISRMLV 722
D + +S + VV +KT++++K + V
Sbjct: 520 DANHEISNKHFEQAIERVVAGMEKKTQVLQKEEKKTV 556
Score = 39 (18.8 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 9/38 (23%), Positives = 22/38 (57%)
Query: 709 RKTKIVKKISRMLVDHLGLTLTKEDLQNVVDLMEPYGQ 746
R+T+ + R ++ + L L ++++ N D++E G+
Sbjct: 695 RRTRDLLLEKRSDIERVALRLLEKEILNREDMIELVGK 732
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 314 (115.6 bits), Expect = 7.7e-24, Sum P(3) = 7.7e-24
Identities = 67/184 (36%), Positives = 105/184 (57%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ +D A + + E+ E V +L++P F ++GA+ P+G L++G G GKT LA A+A E
Sbjct: 306 VSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 365
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT- 570
A+VP + + E + G A+ VR LF+ AR AP I+++++ D R +
Sbjct: 366 AQVPFLAMAGPEFVEVIG-GLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGF 424
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
+ E +NQLLVE+DG D V+++A+T +D AL RPGR+DR + PT E
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQE 484
Query: 631 REKI 634
R +I
Sbjct: 485 RREI 488
Score = 46 (21.3 bits), Expect = 7.7e-24, Sum P(3) = 7.7e-24
Identities = 21/114 (18%), Positives = 48/114 (42%)
Query: 761 TRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPE 820
++E + A +G L+ LL + + V + + P +G +++ ++
Sbjct: 564 SKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLF------ 617
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGP 874
++ L +++ G AA + F + ++++ IA MV Q+G P
Sbjct: 618 TKEQLFERMCMALGGRAAEAI--SFSRVTSGAQDDLRKVTRIAYSMVKQFGMAP 669
Score = 43 (20.2 bits), Expect = 7.7e-24, Sum P(3) = 7.7e-24
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 272 LLIVRLAYLSLNGLWKTGTVSFWRDLILENVRNTNDDIMMMIVFPLLDCIIPY 324
L I+ L LN L +G W D + E + ++ + V P D + Y
Sbjct: 145 LFIIALVMSLLNSLSTSGGSISWADFVNEML--AKGEVQRVQVVPESDVVEVY 195
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 312 (114.9 bits), Expect = 8.1e-24, P = 8.1e-24
Identities = 76/260 (29%), Positives = 135/260 (51%)
Query: 404 RRDPNFR---KLRRVKAYFNYRVRRIKRKK-KAGIDPIKNAFERMKRVKNPPIPLKDFAS 459
+++PN + RR+ AY ++ IK K + ++ + R ++V+ P + D
Sbjct: 880 KKNPNDKLDKNERRIPAYILNKLT-IKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGG 938
Query: 460 VESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVN 518
+ ++E++ E + + L+ + + + +G+L+ G G GKT LA AIA E + ++
Sbjct: 939 MNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFIS 998
Query: 519 VEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESF 578
V+ EL +W G+S +NVR+LF AR +P IIF ++ D A R +T +
Sbjct: 999 VKGPELLT-MWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNS--NTNNDASDRV 1055
Query: 579 INQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIA 638
INQ+L E+DG ++ + ++A T +D+AL RPGR+D++ + P R I +
Sbjct: 1056 INQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAI 1115
Query: 639 AQETMDEELIDLVDWRKVAE 658
+ T E +D+ D K E
Sbjct: 1116 LKNTPLNEDVDIHDMAKRTE 1135
Score = 267 (99.0 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 67/212 (31%), Positives = 114/212 (53%)
Query: 449 NPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALA 507
N I +D ++ +I E++ L+ P F +G AP+GVL+ G GTGKTS+A A
Sbjct: 521 NDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKA 580
Query: 508 IAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQF 567
IA E+ + E+ + +G+S +R++F+ A + P IIF+++ D A R +
Sbjct: 581 IANESNAYCYIINGPEIMSK-HIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSK- 638
Query: 568 IHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPT 627
+ + + ++QLL +DG +K + V+++A T ID AL+R GR DR + P
Sbjct: 639 --SNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPD 696
Query: 628 QSEREKILRIAAQETMDEELIDLVDWRKVAEK 659
+ R +IL +T +L V+ RK+A++
Sbjct: 697 EQGRYEIL---LTKTKKMKLDPDVNLRKIAKE 725
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 312 (114.9 bits), Expect = 8.1e-24, P = 8.1e-24
Identities = 76/260 (29%), Positives = 135/260 (51%)
Query: 404 RRDPNFR---KLRRVKAYFNYRVRRIKRKK-KAGIDPIKNAFERMKRVKNPPIPLKDFAS 459
+++PN + RR+ AY ++ IK K + ++ + R ++V+ P + D
Sbjct: 880 KKNPNDKLDKNERRIPAYILNKLT-IKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGG 938
Query: 460 VESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVN 518
+ ++E++ E + + L+ + + + +G+L+ G G GKT LA AIA E + ++
Sbjct: 939 MNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFIS 998
Query: 519 VEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESF 578
V+ EL +W G+S +NVR+LF AR +P IIF ++ D A R +T +
Sbjct: 999 VKGPELLT-MWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNS--NTNNDASDRV 1055
Query: 579 INQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIA 638
INQ+L E+DG ++ + ++A T +D+AL RPGR+D++ + P R I +
Sbjct: 1056 INQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAI 1115
Query: 639 AQETMDEELIDLVDWRKVAE 658
+ T E +D+ D K E
Sbjct: 1116 LKNTPLNEDVDIHDMAKRTE 1135
Score = 267 (99.0 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 67/212 (31%), Positives = 114/212 (53%)
Query: 449 NPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALA 507
N I +D ++ +I E++ L+ P F +G AP+GVL+ G GTGKTS+A A
Sbjct: 521 NDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKA 580
Query: 508 IAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQF 567
IA E+ + E+ + +G+S +R++F+ A + P IIF+++ D A R +
Sbjct: 581 IANESNAYCYIINGPEIMSK-HIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSK- 638
Query: 568 IHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPT 627
+ + + ++QLL +DG +K + V+++A T ID AL+R GR DR + P
Sbjct: 639 --SNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPD 696
Query: 628 QSEREKILRIAAQETMDEELIDLVDWRKVAEK 659
+ R +IL +T +L V+ RK+A++
Sbjct: 697 EQGRYEIL---LTKTKKMKLDPDVNLRKIAKE 725
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 284 (105.0 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 77/237 (32%), Positives = 125/237 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
N++V + DP+ MK K P D +++ +EI E V L +P
Sbjct: 80 NHKVHAVIGVLMDDTDPLVTV---MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 136
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
++EMG + P+GV++ G GTGKT LA A+A + + V EL ++G VR
Sbjct: 137 YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVR 195
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF+ A + AP I+F+++ D R +++ + + +LL +LDGF+ + V V+
Sbjct: 196 ELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 255
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI-AAQETM--DEELIDLV 651
MAT R I+ +D AL RPGR+DR P + +++I +I ++ T+ D L DL+
Sbjct: 256 MATNR-IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLI 311
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 307 (113.1 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 86/246 (34%), Positives = 132/246 (53%)
Query: 439 NAFERMKRVKN--PP--IPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
N +R K N PP I L D ++ E+ E+VA +++P +Q G PRGVL+
Sbjct: 154 NGSKRQKAEANREPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLL 213
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G G GKT LA A+A E VP +++ A + +G+ G+S VRE+F+ A+ LAP ++F
Sbjct: 214 HGPPGCGKTMLANALANELGVPFISISAPSIVSGM-SGESEKKVREVFEEAKSLAPCLMF 272
Query: 554 VEDFDLFAGVRGQFIHTKQQDHES-FINQLLVELD--GFEKQDG--VVLMATTRNIKQID 608
+++ D R + Q++ E + Q L +D FEK DG V+++ T +D
Sbjct: 273 IDEIDAVTPKR----ESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLD 328
Query: 609 EALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIEL 668
AL+R GR DR L P+Q REKILR A+ +L D+R++A++T +L
Sbjct: 329 SALRRAGRFDREICLTVPSQDAREKILRTMAKGL---KLSGDFDFRQLAKQTPGYVGADL 385
Query: 669 KLVPVA 674
K + A
Sbjct: 386 KALTAA 391
Score = 275 (101.9 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 65/202 (32%), Positives = 108/202 (53%)
Query: 450 PPIPLKDFASVESMREEIN-EVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
P + + +++S+R E+ +V ++ P +Q +G AP GVL+ G G GKT LA A+
Sbjct: 487 PGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAV 546
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A E++ +++ EL +VG+S VR++F AR +P +IF ++ D R +
Sbjct: 547 ANESKANFISIRGPEL-LNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSL 605
Query: 569 HTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+ +N LL ELDG + GV ++A T ID A+ RPGR+D+ + P
Sbjct: 606 ---SEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDA 662
Query: 629 SEREKILRIAAQETMDEELIDL 650
ER +IL+ ++T E ++L
Sbjct: 663 HERVEILKTLTKQTPLHEEVNL 684
Score = 45 (20.9 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 30 EQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSRELQRNLEARIRKNMKKLGNEK 87
E+ + E + L P L + D +D ++ + RE++R + A+ M +L EK
Sbjct: 253 EKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQ--REMERRIVAQFLTCMDELSFEK 309
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 315 (115.9 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 77/223 (34%), Positives = 123/223 (55%)
Query: 430 KKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEI-NEVVAFLQNPSAFQEMGARAP 488
KKA + + A +R P + D ++ +REE+ N ++ ++ P ++ MG +P
Sbjct: 542 KKA-LKKVVPAAKREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSP 600
Query: 489 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLA 548
GVL+ G G GKT LA AIA+E + ++V+ EL +VG+S VR++FQ A +
Sbjct: 601 AGVLMYGPPGCGKTLLAKAIASECQANFISVKGPEL-LNKYVGESERAVRQVFQRAAASS 659
Query: 549 PVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQID 608
P +IF ++FD A RG Q E +NQLL E+DG EK+ V ++A T ID
Sbjct: 660 PCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIID 719
Query: 609 EALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLV 651
A+ RPGR+D++ + P+ ER +IL+ + + +DL+
Sbjct: 720 AAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLI 762
Score = 202 (76.2 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 50/140 (35%), Positives = 76/140 (54%)
Query: 450 PPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
P I + VES +I E + + + +P + +G PRG+L+ G G GKT LA AI
Sbjct: 211 PTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAI 270
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A E +VP+ + A E+ +G+ G+S + VR LF A AP IIF+++ D A R
Sbjct: 271 AGELKVPLFAISATEITSGV-SGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKR---- 325
Query: 569 HTKQQDHES-FINQLLVELD 587
+ +D E ++QLL +D
Sbjct: 326 ESASKDMERRIVSQLLTCMD 345
Score = 72 (30.4 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 589 FEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELI 648
F+K +V+ AT R + +D AL+ GR D+ L P Q+ R KIL++ T L
Sbjct: 398 FKKGHVIVIGATNRP-ESLDTALRIGGRFDKEICLGIPDQTARCKILKVI---TSKMRLE 453
Query: 649 DLVDWRKVAEKT 660
+ D+ ++A T
Sbjct: 454 NNFDYEEIATLT 465
Score = 43 (20.2 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 99 VKGFPEVELKWMFGDKEVVVPKAIGLHLYHGWKAWREEAKADLKRRLLEDV 149
V G E ++ +F + P I + RE A D++RR++ +
Sbjct: 290 VSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASKDMERRIVSQL 340
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 285 (105.4 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 80/247 (32%), Positives = 128/247 (51%)
Query: 425 RIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEM 483
++++ + +DP+ + M K P ++ +EI EV+ L++P F+ +
Sbjct: 105 KLEKMLPSSVDPLVSL---MMVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESL 161
Query: 484 GARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQT 543
G P+GVL+ G GTGKT LA A+A + V EL ++G+ + VRELF
Sbjct: 162 GIAQPKGVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSEL-VQKYIGEGSRMVRELFVM 220
Query: 544 ARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTR 602
AR+ AP IIF+++ D R + + + + +LL +LDGFE + ++MAT R
Sbjct: 221 AREHAPSIIFMDEIDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNR 280
Query: 603 NIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTAL 662
+ +D AL RPGR+DR P+ R ILRI ++ +M+ L ++ K+AEK
Sbjct: 281 -LDILDPALLRPGRIDRKIEFPPPSVEARADILRIHSR-SMN--LTRGINLTKIAEKMNG 336
Query: 663 LRPIELK 669
ELK
Sbjct: 337 CSGAELK 343
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 296 (109.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 82/260 (31%), Positives = 132/260 (50%)
Query: 414 RVKAYFN-YRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVA 472
RV Y + Y++ +I K +DP+ + MK K P + ++ +E+ EV+
Sbjct: 143 RVALYNDSYKLHKILPSK---VDPLVSL---MKVEKVPDSTYEMVGGLDQQVKEVKEVIE 196
Query: 473 F-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVG 531
+++P F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G
Sbjct: 197 LPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKYIG 255
Query: 532 QSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEK 591
+ + VRELF AR+ AP IIF+++ D R + H + + + +LL +LDGFE
Sbjct: 256 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMM-ELLNQLDGFES 314
Query: 592 QDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLV 651
+ ++ T I +DEAL RPGR+DR P R +IL+I +++ L+ +
Sbjct: 315 TQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKM---NLMRGI 371
Query: 652 DWRKVAEKTALLRPIELKLV 671
D K+A E+K V
Sbjct: 372 DMLKIATDMNNCSGAEVKAV 391
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 296 (109.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 82/260 (31%), Positives = 132/260 (50%)
Query: 414 RVKAYFN-YRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVA 472
RV Y + Y++ +I K +DP+ + MK K P + ++ +E+ EV+
Sbjct: 143 RVALYNDSYKLHKILPSK---VDPLVSL---MKVEKVPDSTYEMVGGLDQQVKEVKEVIE 196
Query: 473 F-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVG 531
+++P F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G
Sbjct: 197 LPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKYIG 255
Query: 532 QSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEK 591
+ + VRELF AR+ AP IIF+++ D R + H + + + +LL +LDGFE
Sbjct: 256 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMM-ELLNQLDGFES 314
Query: 592 QDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLV 651
+ ++ T I +DEAL RPGR+DR P R +IL+I +++ L+ +
Sbjct: 315 TQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKM---NLMRGI 371
Query: 652 DWRKVAEKTALLRPIELKLV 671
D K+A E+K V
Sbjct: 372 DMLKIATDMNNCSGAEVKAV 391
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 305 (112.4 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 79/225 (35%), Positives = 121/225 (53%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ DFA E ++ E+ E+V L+N FQ G P+GVL+ G GTGKT LA AIA E
Sbjct: 313 VTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGE 372
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG-QFIHT 570
A +P + ++VG +AS V++LF ++R AP IIF+++ D RG I
Sbjct: 373 AGLPFFAANGTDF-VEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPDIGG 431
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLM-ATTRNIKQIDEALQRPGRMDRIFNLQKPTQS 629
+ E + Q+L E+DGF+ VL+ T + +D AL R GR D+I + P++
Sbjct: 432 GGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKD 491
Query: 630 EREKILRIAAQETM---DEELIDLVDWRKVAEKTALLRPIELKLV 671
R IL++ A+ ++E +L+ ++VAE T EL+ V
Sbjct: 492 GRLAILKVHARNKFFRSEDEKEELL--QEVAENTEDFTGAELQNV 534
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 294 (108.6 bits), Expect = 4.2e-23, P = 4.2e-23
Identities = 75/223 (33%), Positives = 122/223 (54%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVL 492
+DP+ + MK K P D +ES +EI E V L +P ++++G + P+GV+
Sbjct: 175 VDPLVSV---MKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVI 231
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G GTGKT LA A+A E + V EL ++G VRE+F+ A + AP I+
Sbjct: 232 LYGPPGTGKTLLAKAVANETSATFLRVVGSEL-IQKYLGDGPKLVREMFKVAEEHAPSIV 290
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEAL 611
F+++ D R + +++ + + +LL +LDGF+ + V V+MAT R I +D AL
Sbjct: 291 FIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNR-IDSLDPAL 349
Query: 612 QRPGRMDRIFNLQKPTQSEREKILRI-AAQETMDEELIDLVDW 653
RPGR+DR L P + +I +I ++ TM + +DL ++
Sbjct: 350 IRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPD-VDLEEF 391
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 294 (108.6 bits), Expect = 4.2e-23, P = 4.2e-23
Identities = 75/223 (33%), Positives = 122/223 (54%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVL 492
+DP+ + MK K P D +ES +EI E V L +P ++++G + P+GV+
Sbjct: 175 VDPLVSV---MKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVI 231
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G GTGKT LA A+A E + V EL ++G VRE+F+ A + AP I+
Sbjct: 232 LYGPPGTGKTLLAKAVANETSATFLRVVGSEL-IQKYLGDGPKLVREMFKVAEEHAPSIV 290
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEAL 611
F+++ D R + +++ + + +LL +LDGF+ + V V+MAT R I +D AL
Sbjct: 291 FIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNR-IDSLDPAL 349
Query: 612 QRPGRMDRIFNLQKPTQSEREKILRI-AAQETMDEELIDLVDW 653
RPGR+DR L P + +I +I ++ TM + +DL ++
Sbjct: 350 IRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPD-VDLEEF 391
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 315 (115.9 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 68/184 (36%), Positives = 105/184 (57%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ KD A + + E+ E V +L++P F ++GA+ P+G L++G G GKT LA A+A E
Sbjct: 306 VSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 365
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHT- 570
A+VP + + E + G A+ VR LF+ AR AP I+++++ D R +
Sbjct: 366 AQVPFLAMAGPEFVEVIG-GLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424
Query: 571 KQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSE 630
+ E +NQLLVE+DG D V+++A+T +D AL RPGR+DR + PT E
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALLRPGRLDRHVFIDLPTLQE 484
Query: 631 REKI 634
R +I
Sbjct: 485 RREI 488
Score = 42 (19.8 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 19/114 (16%), Positives = 48/114 (42%)
Query: 761 TRETKLPHAVWAAGRGLIALLLPNFDTVDNLWLEPCAWEGIGCTKITKAEKEGSMSGNPE 820
++E + A +G L+ LL + + V + + P +G ++ ++ +
Sbjct: 564 SKEEQKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQMLPRDQ------HLF 617
Query: 821 SRSYLEKKLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATRMVLQYGWGP 874
++ L +++ G + + F + + ++++ IA MV Q+G P
Sbjct: 618 TKEQLFERMCMALGGRVSETI--SFNKVTSGAQDDLRKVTRIAYSMVKQFGMAP 669
Score = 39 (18.8 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 272 LLIVRLAYLSLNGLWKTGTVSFWRDLILENVRNTNDDIMMMIVFPLLDCIIPY 324
L ++ + LN L +G W D + E + ++ + V P D + Y
Sbjct: 145 LFVIAVVMSLLNALSTSGGNISWNDFVHEML--AKGEVQRVQVVPESDVVEVY 195
Score = 38 (18.4 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 703 VVPKWFRKTKIVKKISRMLVDHLGLTLTKEDLQNVVDLMEPYGQISNGIELLTPPLDWT 761
+V K +R T+ V + + + L L ++++ N D+ G +G + + P W+
Sbjct: 706 LVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKMIAPQRWS 764
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 294 (108.6 bits), Expect = 5.6e-23, P = 5.6e-23
Identities = 76/238 (31%), Positives = 123/238 (51%)
Query: 439 NAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGER 497
N + M+ + P D ++ EEI E + + ++ F+++G +AP+G L+ G
Sbjct: 195 NRVKAMEVDEKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPP 254
Query: 498 GTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDF 557
GTGKT LA A AAE + + +L +++G A VR+ F A++ AP IIF+++
Sbjct: 255 GTGKTLLARACAAETNATFLKLAGPQL-VQMFIGDGAKLVRDCFALAKEKAPSIIFIDEL 313
Query: 558 DLFAGVRGQFIHTKQQDHE--SFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPG 615
D G + +F K D E + +LL +LDGF D + ++A T + +D AL R G
Sbjct: 314 DA-VGTK-RFDSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSG 371
Query: 616 RMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLVPV 673
R+DR P + R IL+I +++ E D V+W ++A T +LK V V
Sbjct: 372 RLDRKIEFPLPNEEARANILQIHSRKMTVE---DSVNWAELARSTDEFGGAQLKAVCV 426
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 311 (114.5 bits), Expect = 6.2e-23, Sum P(2) = 6.2e-23
Identities = 77/226 (34%), Positives = 115/226 (50%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ E V + F G +GVL G GTGKT LA
Sbjct: 489 VEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLA 548
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E ++V+ EL +W G+S SNVR++F AR AP ++F+++ D A RG
Sbjct: 549 KAIANECSANFISVKGPEL-LSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARG 607
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ +NQLL E+DG + V ++ T QID AL RPGR+D++ +
Sbjct: 608 ASAGDSGGG-DRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPL 666
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLV 671
P + R IL+ + T E +DL R VA+ T +L+ V
Sbjct: 667 PDEEARFSILQTQLRHTPVAEDVDL---RAVAKATHGFSGADLEFV 709
Score = 275 (101.9 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 70/206 (33%), Positives = 111/206 (53%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 225 DIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGA 284
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + + G+S SN+R+ F+ A +P IIF+++ D A R + T +
Sbjct: 285 FFFLINGPEIMSKM-AGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK---TNGEV 340
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG + + VV+MA T ID AL+R GR DR ++ P + R +I
Sbjct: 341 ERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEI 400
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
LRI T + +L D VD ++A +T
Sbjct: 401 LRI---HTKNMKLADDVDLEQIAAET 423
Score = 40 (19.1 bits), Expect = 6.2e-23, Sum P(2) = 6.2e-23
Identities = 20/101 (19%), Positives = 44/101 (43%)
Query: 144 RLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVSNKIVESAR 203
+L +DVD +Q A+ + D + S+ + + + +M + + ++++S
Sbjct: 409 KLADDVDL-EQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDED-EIDAEVLDSLG 466
Query: 204 IRHDWGAMYLSLKGDD--KEFYVDIKEFEVLFEDFGGFDEL 242
+ D L +E V++ V +ED GG +E+
Sbjct: 467 VTMDNFRFALGSSNPSALRETVVEVPN--VRWEDIGGLEEV 505
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 292 (107.8 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 71/217 (32%), Positives = 119/217 (54%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVL 492
+DP+ + MK K P D +E+ +EI E V L +P ++++G + P+GV+
Sbjct: 170 VDPMVSV---MKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVI 226
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ GE GTGKT LA A+A + V EL ++G VRELF+ A DL+P I+
Sbjct: 227 LYGEPGTGKTLLAKAVANSTSATFLRVVGSEL-IQKYLGDGPKLVRELFRVADDLSPSIV 285
Query: 553 FVEDFDLFAGVRGQFIHTK-QQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEAL 611
F+++ D G + H+ +++ + + +LL +LDGF+ + V ++ T I+ +D AL
Sbjct: 286 FIDEIDA-VGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPAL 344
Query: 612 QRPGRMDRIFNLQKPTQSEREKILRI-AAQETMDEEL 647
RPGR+DR P R +I +I ++ T+ E++
Sbjct: 345 LRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDV 381
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 286 (105.7 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 80/242 (33%), Positives = 127/242 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
+Y + +I K +DP+ + M K P + ++ +EI EV+ +++P
Sbjct: 114 SYTLHKILPNK---VDPLVSL---MLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPE 167
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F +G P+GVL+ G GTGKT LA A+A + V EL ++G+ + VR
Sbjct: 168 LFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL-VQKFIGEGSRMVR 226
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF AR+ AP IIF+++ D R + T + + + +LL +LDGFE + V+
Sbjct: 227 ELFVMAREHAPSIIFMDEIDSIGSARLE-TGTGDSEVQRTMLELLNQLDGFEATKNIKVI 285
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
MAT R I +D+AL RPGR+DR P + R IL+I +++ L ++ RK+A
Sbjct: 286 MATNR-IDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM---NLTRGINLRKIA 341
Query: 658 EK 659
E+
Sbjct: 342 EE 343
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 312 (114.9 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 67/213 (31%), Positives = 114/213 (53%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V++ + D ++ ++EE+ E V + + +P + + G +GVL G GTGKT LA
Sbjct: 479 VESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLA 538
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A E ++V+ EL +W G+S SN+R++F AR AP ++F+++ D A RG
Sbjct: 539 KAVATEVSANFISVKGPEL-LSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARG 597
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ + +NQLL E+DG + V ++ T QID A+ RPGR+D++ +
Sbjct: 598 GSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPL 657
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDWRKVAE 658
P ++ R IL ++T E ++L K +
Sbjct: 658 PDENARLSILNAQLRKTPLEPGLELTAIAKATQ 690
Score = 271 (100.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 70/206 (33%), Positives = 110/206 (53%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P F+ +G + PRGVL+ G GTGKT +A A+A E
Sbjct: 215 DIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGA 274
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + + G+S SN+R+ F+ A AP IIF+++ D A R + T +
Sbjct: 275 FFFLINGPEVMSKM-AGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDK---TNGEV 330
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG + + VV++A T ID AL+R GR DR ++ P + R ++
Sbjct: 331 ERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEV 390
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
LRI T + +L D VD +A +T
Sbjct: 391 LRI---HTKNMKLADDVDLEALAAET 413
Score = 39 (18.8 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 226 IKEFEVLFEDFGGFDEL 242
++ V ++D GG DE+
Sbjct: 479 VESVNVTWDDVGGLDEI 495
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 286 (105.7 bits), Expect = 9.2e-23, P = 9.2e-23
Identities = 88/266 (33%), Positives = 136/266 (51%)
Query: 407 PNFRKLRRVKAYFNYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREE 466
PN R R +Y ++ +I K +DP+ + M K P + +E +E
Sbjct: 106 PNIRVALRNDSY---QLIKILPNK---VDPLVSL---MMVEKIPDSTYEMVGGLEKQIKE 156
Query: 467 INEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELE 525
I EV+ +++P F+ +G P+G+L+ G GTGKT LA A+A + V EL
Sbjct: 157 IKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSEL- 215
Query: 526 AGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIH-TKQQDHESFINQLLV 584
++G+ + VRELF AR+ AP IIF+++ D R + + + + +LL
Sbjct: 216 VQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLN 275
Query: 585 ELDGFEKQDGV-VLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETM 643
+LDGFE + V+MAT R I +D AL RPGR+DR P+ R +ILRI ++ +M
Sbjct: 276 QLDGFEATKNIKVIMATNR-IDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSR-SM 333
Query: 644 DEELIDLVDWRKVAEKTALLRPIELK 669
+ L +D + +AEK ELK
Sbjct: 334 N--LTRGIDLKSIAEKMNGASGAELK 357
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 299 (110.3 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 64/205 (31%), Positives = 113/205 (55%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P D +++++ E+ E+V + +++P + + G + RGVL G G GKT LA
Sbjct: 474 VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 533
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVR++F AR AP ++F ++ D A RG
Sbjct: 534 KAIANECQANFISIKGPELLT-MWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 592
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 593 GSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 652
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P ++ R +I + + ++T +DL
Sbjct: 653 PDEASRLQIFKASLRKTPLSADLDL 677
Score = 258 (95.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 73/226 (32%), Positives = 118/226 (52%)
Query: 435 DPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
DPIK E + N + D V +I E+V L++P F+ +G + PRG+L+
Sbjct: 192 DPIKR--EEEEEALNE-VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILL 248
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G GTGKT +A A+A E + E+ + + G+S SN+R+ F +P I+F
Sbjct: 249 FGPPGTGKTLIARAVANETGAFFFLINGPEIMSKM-SGESESNLRKAFAECEKNSPAILF 307
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQR 613
+++ D A R + H + + + ++QLL +DG + + VV++A T ID AL+R
Sbjct: 308 IDEIDAIAPKREK-AHGEVE--KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRR 364
Query: 614 PGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEK 659
GR DR ++ P R +ILRI T + +L + VD +VA +
Sbjct: 365 FGRFDREIDIGIPDAVGRLEILRI---HTKNMKLGEDVDLEQVANE 407
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 299 (110.3 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 64/205 (31%), Positives = 113/205 (55%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P D +++++ E+ E+V + +++P + + G + RGVL G G GKT LA
Sbjct: 474 VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 533
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVR++F AR AP ++F ++ D A RG
Sbjct: 534 KAIANECQANFISIKGPELLT-MWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 592
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 593 GSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 652
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P ++ R +I + + ++T +DL
Sbjct: 653 PDEASRLQIFKASLRKTPLSADLDL 677
Score = 258 (95.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 73/226 (32%), Positives = 118/226 (52%)
Query: 435 DPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
DPIK E + N + D V +I E+V L++P F+ +G + PRG+L+
Sbjct: 192 DPIKR--EEEEEALNE-VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILL 248
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G GTGKT +A A+A E + E+ + + G+S SN+R+ F +P I+F
Sbjct: 249 FGPPGTGKTLIARAVANETGAFFFLINGPEIMSKM-SGESESNLRKAFAECEKNSPAILF 307
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQR 613
+++ D A R + H + + + ++QLL +DG + + VV++A T ID AL+R
Sbjct: 308 IDEIDAIAPKREK-AHGEVE--KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRR 364
Query: 614 PGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEK 659
GR DR ++ P R +ILRI T + +L + VD +VA +
Sbjct: 365 FGRFDREIDIGIPDAVGRLEILRI---HTKNMKLGEDVDLEQVANE 407
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 309 (113.8 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 66/205 (32%), Positives = 113/205 (55%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E+++ E+ E V + +++P F++ G +GVL G G GKT LA
Sbjct: 473 VEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 532
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 533 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 591
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ + +NQLL E+DG + V ++ T ID AL RPGR+D++ +
Sbjct: 592 NSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 651
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P + R +I + +++ + +DL
Sbjct: 652 PDEESRYQIFKSCLRKSPVAKDVDL 676
Score = 269 (99.8 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 72/227 (31%), Positives = 120/227 (52%)
Query: 435 DPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
+PIK E +R+ + D V +I E+V L++P F+ +G + P+G+L+
Sbjct: 192 EPIKREDE--ERLDE--VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 247
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G G+GKT +A A+A E + E+ + L G+S SN+R+ F+ A AP IIF
Sbjct: 248 YGPPGSGKTLIARAVANETGAFFFCINGPEIMSKL-AGESESNLRKAFEEAEKNAPSIIF 306
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQR 613
+++ D A R + T + ++QLL +DG + + V++M T ID AL+R
Sbjct: 307 IDEIDSIAPKREK---THGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRR 363
Query: 614 PGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
GR DR ++ P + R ++LRI T + +L + VD +V++ T
Sbjct: 364 FGRFDREIDIGVPDEIGRLEVLRI---HTKNMKLAEDVDLERVSKDT 407
Score = 39 (18.8 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 14/62 (22%), Positives = 26/62 (41%)
Query: 89 FVVRTPED-EVVKGFPEVELKWMFGDKEVVVPKAIGLHLYHGWKAWREEAKADLKRRLLE 147
F + PE + G E L+ F + E P I + RE+ +++RR++
Sbjct: 271 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVS 330
Query: 148 DV 149
+
Sbjct: 331 QL 332
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 289 (106.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 73/217 (33%), Positives = 117/217 (53%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVL 492
+DP+ N MK K P D +E+ +E+ E + L +P ++E+G + P+GV+
Sbjct: 166 VDPMVNV---MKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVI 222
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ GE GTGKT LA A+A + + V EL ++G VRELF+ A + AP I+
Sbjct: 223 LYGEPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVRELFRVADECAPSIV 281
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEAL 611
F+++ D R +++ + + +LL +LDGF+ + V V+MAT R I+ +D AL
Sbjct: 282 FIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNR-IETLDPAL 340
Query: 612 QRPGRMDRIFNLQKPTQSEREKILRI-AAQETMDEEL 647
RPGR+DR P + KI I A+ + E++
Sbjct: 341 IRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDV 377
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 288 (106.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 82/254 (32%), Positives = 129/254 (50%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
NY + + K +DP+ + M K P + +++ +EI EV+ +++P
Sbjct: 146 NYAIHEVLPSK---VDPLVSL---MMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPE 199
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F +G P+GVL+ G GTGKT LA A+A + V EL ++G+ A VR
Sbjct: 200 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL-VQKFIGEGARMVR 258
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF AR+ AP IIF+++ D R + + + + +LL +LDGFE + V+
Sbjct: 259 ELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVI 318
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
MAT R I +D AL RPGR+DR P + R +IL+I +++ L+ + K+A
Sbjct: 319 MATNR-IDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKM---NLMRGIRMDKIA 374
Query: 658 EKTALLRPIELKLV 671
E+ E+K V
Sbjct: 375 EQIPGASGAEVKSV 388
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 297 (109.6 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 71/219 (32%), Positives = 119/219 (54%)
Query: 433 GIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGV 491
G++ I+ + R + P + D +E+++ ++ + V + L++P +F MG + P+GV
Sbjct: 605 GMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGV 664
Query: 492 LIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVI 551
L+ G G KT +A A+A E+ + + ++ EL +VG+S VRE+F+ AR +AP I
Sbjct: 665 LLYGPPGCSKTMIAKALANESGLNFLAIKGPEL-MNKYVGESERAVREIFRKARAVAPSI 723
Query: 552 IFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEAL 611
IF ++ D A RG + + QLL E+DG E+ V ++A T +ID+AL
Sbjct: 724 IFFDELDALAVERGSSSGAGNVA-DRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKAL 782
Query: 612 QRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDL 650
RPGR+DRI + P + R +IL + +DL
Sbjct: 783 MRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDL 821
Score = 208 (78.3 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 58/201 (28%), Positives = 100/201 (49%)
Query: 460 VESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVN 518
+ S + I E++ L+ P F+ G APRG+L+ G GTGKT +A A+A E V
Sbjct: 358 LNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSV 417
Query: 519 VEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESF 578
+ E+ + + G++ + +R++F A P IIF+++ D R + + +
Sbjct: 418 INGPEIISKFY-GETEARLRQIFAEATLRHPSIIFIDELDALCPKREG---AQSEVEKRV 473
Query: 579 INQLLVELDGF--EKQDG-VVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER---- 631
+ LL +DG E +G V+++ T + +D AL+RPGR D+ + P +R
Sbjct: 474 VASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDIL 533
Query: 632 EKILRIAAQETMDEELIDLVD 652
+K+LR EL+ L +
Sbjct: 534 QKLLRRVPHLLTKAELLRLAN 554
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 307 (113.1 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 67/205 (32%), Positives = 112/205 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ E+V + +++P F + G +GVL G G GKT LA
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 529 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
I + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P + R IL+ +++ + +DL
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDL 672
Score = 279 (103.3 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 71/206 (34%), Positives = 113/206 (54%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P+ F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 205 DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 264
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + L G+S SN+R+ F+ A AP IIF+++ D A R + T +
Sbjct: 265 FFFLINGPEIMSKL-AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK---THGEV 320
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG +++ V++MA T ID AL+R GR DR ++ P + R +I
Sbjct: 321 ERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI 380
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
L+I T + +L D VD +VA +T
Sbjct: 381 LQI---HTKNMKLADDVDLEQVANET 403
Score = 39 (18.8 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 47/230 (20%), Positives = 92/230 (40%)
Query: 20 ELESAQRKHLEQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSRELQRNLEARIRK 78
E+ S E + + E E P + + D LD A+ K+ K E++R + +++
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD-AIAPKR-EKTHGEVERRIVSQLLT 330
Query: 79 NMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVV--PKAIGLHLYHGWKAWREE 136
M L +V + P + F D+EV + P A G L E
Sbjct: 331 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF-DREVDIGIPDATG-RL--------EI 380
Query: 137 AKADLKR-RLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVS 195
+ K +L +DVD +Q + + D + S+ + + ++ + +
Sbjct: 381 LQIHTKNMKLADDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-DETID 438
Query: 196 NKIVESARIRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+++ S + D W A+ S +E V++ + V +ED GG +++
Sbjct: 439 AEVMNSLAVTMDDFRW-ALSQSNPSALRETVVEVPQ--VTWEDIGGLEDV 485
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 307 (113.1 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 67/205 (32%), Positives = 112/205 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ E+V + +++P F + G +GVL G G GKT LA
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 529 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
I + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P + R IL+ +++ + +DL
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDL 672
Score = 279 (103.3 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 71/206 (34%), Positives = 113/206 (54%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P+ F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 205 DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 264
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + L G+S SN+R+ F+ A AP IIF+++ D A R + T +
Sbjct: 265 FFFLINGPEIMSKL-AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK---THGEV 320
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG +++ V++MA T ID AL+R GR DR ++ P + R +I
Sbjct: 321 ERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI 380
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
L+I T + +L D VD +VA +T
Sbjct: 381 LQI---HTKNMKLADDVDLEQVANET 403
Score = 39 (18.8 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 47/230 (20%), Positives = 92/230 (40%)
Query: 20 ELESAQRKHLEQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSRELQRNLEARIRK 78
E+ S E + + E E P + + D LD A+ K+ K E++R + +++
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD-AIAPKR-EKTHGEVERRIVSQLLT 330
Query: 79 NMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVV--PKAIGLHLYHGWKAWREE 136
M L +V + P + F D+EV + P A G L E
Sbjct: 331 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF-DREVDIGIPDATG-RL--------EI 380
Query: 137 AKADLKR-RLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVS 195
+ K +L +DVD +Q + + D + S+ + + ++ + +
Sbjct: 381 LQIHTKNMKLADDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-DETID 438
Query: 196 NKIVESARIRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+++ S + D W A+ S +E V++ + V +ED GG +++
Sbjct: 439 AEVMNSLAVTMDDFRW-ALSQSNPSALRETVVEVPQ--VTWEDIGGLEDV 485
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 307 (113.1 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 67/205 (32%), Positives = 112/205 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ E+V + +++P F + G +GVL G G GKT LA
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 529 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
I + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P + R IL+ +++ + +DL
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDL 672
Score = 279 (103.3 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 71/206 (34%), Positives = 113/206 (54%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P+ F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 205 DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 264
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + L G+S SN+R+ F+ A AP IIF+++ D A R + T +
Sbjct: 265 FFFLINGPEIMSKL-AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK---THGEV 320
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG +++ V++MA T ID AL+R GR DR ++ P + R +I
Sbjct: 321 ERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI 380
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
L+I T + +L D VD +VA +T
Sbjct: 381 LQI---HTKNMKLADDVDLEQVANET 403
Score = 39 (18.8 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 47/230 (20%), Positives = 92/230 (40%)
Query: 20 ELESAQRKHLEQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSRELQRNLEARIRK 78
E+ S E + + E E P + + D LD A+ K+ K E++R + +++
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD-AIAPKR-EKTHGEVERRIVSQLLT 330
Query: 79 NMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVV--PKAIGLHLYHGWKAWREE 136
M L +V + P + F D+EV + P A G L E
Sbjct: 331 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF-DREVDIGIPDATG-RL--------EI 380
Query: 137 AKADLKR-RLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVS 195
+ K +L +DVD +Q + + D + S+ + + ++ + +
Sbjct: 381 LQIHTKNMKLADDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-DETID 438
Query: 196 NKIVESARIRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+++ S + D W A+ S +E V++ + V +ED GG +++
Sbjct: 439 AEVMNSLAVTMDDFRW-ALSQSNPSALRETVVEVPQ--VTWEDIGGLEDV 485
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 307 (113.1 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 67/205 (32%), Positives = 112/205 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ E+V + +++P F + G +GVL G G GKT LA
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 529 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
I + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P + R IL+ +++ + +DL
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDL 672
Score = 279 (103.3 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 71/206 (34%), Positives = 113/206 (54%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P+ F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 205 DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 264
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + L G+S SN+R+ F+ A AP IIF+++ D A R + T +
Sbjct: 265 FFFLINGPEIMSKL-AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK---THGEV 320
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG +++ V++MA T ID AL+R GR DR ++ P + R +I
Sbjct: 321 ERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI 380
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
L+I T + +L D VD +VA +T
Sbjct: 381 LQI---HTKNMKLADDVDLEQVANET 403
Score = 39 (18.8 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 47/230 (20%), Positives = 92/230 (40%)
Query: 20 ELESAQRKHLEQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSRELQRNLEARIRK 78
E+ S E + + E E P + + D LD A+ K+ K E++R + +++
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD-AIAPKR-EKTHGEVERRIVSQLLT 330
Query: 79 NMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVV--PKAIGLHLYHGWKAWREE 136
M L +V + P + F D+EV + P A G L E
Sbjct: 331 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF-DREVDIGIPDATG-RL--------EI 380
Query: 137 AKADLKR-RLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVS 195
+ K +L +DVD +Q + + D + S+ + + ++ + +
Sbjct: 381 LQIHTKNMKLADDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-DETID 438
Query: 196 NKIVESARIRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+++ S + D W A+ S +E V++ + V +ED GG +++
Sbjct: 439 AEVMNSLAVTMDDFRW-ALSQSNPSALRETVVEVPQ--VTWEDIGGLEDV 485
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 307 (113.1 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 67/205 (32%), Positives = 112/205 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ E+V + +++P F + G +GVL G G GKT LA
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 529 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
I + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P + R IL+ +++ + +DL
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDL 672
Score = 279 (103.3 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 71/206 (34%), Positives = 113/206 (54%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P+ F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 205 DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 264
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + L G+S SN+R+ F+ A AP IIF+++ D A R + T +
Sbjct: 265 FFFLINGPEIMSKL-AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK---THGEV 320
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG +++ V++MA T ID AL+R GR DR ++ P + R +I
Sbjct: 321 ERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI 380
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
L+I T + +L D VD +VA +T
Sbjct: 381 LQI---HTKNMKLADDVDLEQVANET 403
Score = 39 (18.8 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 47/230 (20%), Positives = 92/230 (40%)
Query: 20 ELESAQRKHLEQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSRELQRNLEARIRK 78
E+ S E + + E E P + + D LD A+ K+ K E++R + +++
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD-AIAPKR-EKTHGEVERRIVSQLLT 330
Query: 79 NMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVV--PKAIGLHLYHGWKAWREE 136
M L +V + P + F D+EV + P A G L E
Sbjct: 331 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF-DREVDIGIPDATG-RL--------EI 380
Query: 137 AKADLKR-RLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVS 195
+ K +L +DVD +Q + + D + S+ + + ++ + +
Sbjct: 381 LQIHTKNMKLADDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-DETID 438
Query: 196 NKIVESARIRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+++ S + D W A+ S +E V++ + V +ED GG +++
Sbjct: 439 AEVMNSLAVTMDDFRW-ALSQSNPSALRETVVEVPQ--VTWEDIGGLEDV 485
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 307 (113.1 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 67/205 (32%), Positives = 112/205 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ E+V + +++P F + G +GVL G G GKT LA
Sbjct: 473 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 532
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 533 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 591
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
I + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 592 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 651
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P + R IL+ +++ + +DL
Sbjct: 652 PDEKSRVAILKANLRKSPVAKDVDL 676
Score = 265 (98.3 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 69/207 (33%), Positives = 110/207 (53%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P+ F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 205 DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 264
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG-QFIHTKQQ 573
+ E+ + L G+S SN+R+ F+ AP IIF+++ D A T +
Sbjct: 265 FFFLINGPEIMSKL-AGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQTHGE 323
Query: 574 DHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREK 633
++QLL +DG +++ V++MA T ID AL+R GR DR ++ P + R +
Sbjct: 324 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 383
Query: 634 ILRIAAQETMDEELIDLVDWRKVAEKT 660
IL+I T + +L D VD +VA +T
Sbjct: 384 ILQI---HTKNMKLADDVDLEQVANET 407
Score = 39 (18.8 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 46/233 (19%), Positives = 91/233 (39%)
Query: 20 ELESAQRKHLEQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSR---ELQRNLEAR 75
E+ S E + + E E P + + D LD A+ C + E++R + ++
Sbjct: 273 EIMSKLAGESESNLRKAFEETEKNAPAIIFIDELD-AIASDDCFPSPQTHGEVERRIVSQ 331
Query: 76 IRKNMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVV--PKAIGLHLYHGWKAW 133
+ M L +V + P + F D+EV + P A G L
Sbjct: 332 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF-DREVDIGIPDATG-RL------- 382
Query: 134 REEAKADLKR-RLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPY 192
E + K +L +DVD +Q + + D + S+ + + ++ +
Sbjct: 383 -EILQIHTKNMKLADDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-DE 439
Query: 193 AVSNKIVESARIRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+ +++ S + D W A+ S +E V++ + V +ED GG +++
Sbjct: 440 TIDAEVMNSLAVTMDDFRW-ALSQSNPSALRETVVEVPQ--VTWEDIGGLEDV 489
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 307 (113.1 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 67/205 (32%), Positives = 112/205 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ E+V + +++P F + G +GVL G G GKT LA
Sbjct: 485 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 544
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 545 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 603
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
I + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 604 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 663
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P + R IL+ +++ + +DL
Sbjct: 664 PDEKSRVAILKANLRKSPVAKDVDL 688
Score = 279 (103.3 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 71/206 (34%), Positives = 113/206 (54%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P+ F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 221 DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 280
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + L G+S SN+R+ F+ A AP IIF+++ D A R + T +
Sbjct: 281 FFFLINGPEIMSKL-AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK---THGEV 336
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG +++ V++MA T ID AL+R GR DR ++ P + R +I
Sbjct: 337 ERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI 396
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
L+I T + +L D VD +VA +T
Sbjct: 397 LQI---HTKNMKLADDVDLEQVANET 419
Score = 39 (18.8 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 47/230 (20%), Positives = 92/230 (40%)
Query: 20 ELESAQRKHLEQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSRELQRNLEARIRK 78
E+ S E + + E E P + + D LD A+ K+ K E++R + +++
Sbjct: 289 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD-AIAPKR-EKTHGEVERRIVSQLLT 346
Query: 79 NMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVV--PKAIGLHLYHGWKAWREE 136
M L +V + P + F D+EV + P A G L E
Sbjct: 347 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF-DREVDIGIPDATG-RL--------EI 396
Query: 137 AKADLKR-RLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVS 195
+ K +L +DVD +Q + + D + S+ + + ++ + +
Sbjct: 397 LQIHTKNMKLADDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-DETID 454
Query: 196 NKIVESARIRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+++ S + D W A+ S +E V++ + V +ED GG +++
Sbjct: 455 AEVMNSLAVTMDDFRW-ALSQSNPSALRETVVEVPQ--VTWEDIGGLEDV 501
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 287 (106.1 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 70/216 (32%), Positives = 116/216 (53%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVL 492
+DP+ + MK K P D +E+ +EI E V L +P ++++G + P+GV+
Sbjct: 170 VDPMVSV---MKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVI 226
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ GE GTGKT LA A+A + V EL ++G VRELF+ A DL+P I+
Sbjct: 227 LYGEPGTGKTLLAKAVANSTSATFLRVVGSEL-IQKYLGDGPKLVRELFRVADDLSPSIV 285
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQ 612
F+++ D R +++ + + +LL +LDGF+ + V ++ T I+ +D AL
Sbjct: 286 FIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALL 345
Query: 613 RPGRMDRIFNLQKPTQSEREKILRI-AAQETMDEEL 647
RPGR+DR P R +I +I ++ T+ E++
Sbjct: 346 RPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDV 381
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 283 (104.7 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 71/197 (36%), Positives = 111/197 (56%)
Query: 465 EEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQE 523
+EI EV+ +++P F+ +G P+GV++ G GTGKT LA A+A + V E
Sbjct: 158 KEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAE 217
Query: 524 LEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLL 583
L ++G+ + VRELF AR+ AP IIF+++ D R + + + + +LL
Sbjct: 218 L-VQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELL 276
Query: 584 VELDGFEKQDGV-VLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQET 642
+LDGFE + ++MAT R + +D AL RPGR+DR P+ + R +ILRI +++
Sbjct: 277 NQLDGFETSKNIKIIMATNR-LDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKM 335
Query: 643 MDEELIDLVDWRKVAEK 659
L ++ RKVAEK
Sbjct: 336 ---NLTRGINLRKVAEK 349
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 295 (108.9 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 65/206 (31%), Positives = 114/206 (55%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P D +++++ E+ E+V + +++P + + G + RGVL G G GKT LA
Sbjct: 475 VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 534
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVR++F AR AP ++F ++ D A RG
Sbjct: 535 KAIANECQANFISIKGPELLT-MWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 593
Query: 566 QFIHTKQQD-HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
+ INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 594 GGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIP 653
Query: 625 KPTQSEREKILRIAAQETMDEELIDL 650
P ++ R +IL+ + ++T + +DL
Sbjct: 654 LPDEASRHQILKASLRKTPLSKDLDL 679
Score = 262 (97.3 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 73/226 (32%), Positives = 116/226 (51%)
Query: 435 DPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
DPIK E + N I D V +I E+V L++P F+ +G + PRG+L+
Sbjct: 193 DPIKR--EEEEESMND-IGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILL 249
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G GTGKT +A A+A E + E+ + + G+S SN+R+ F+ P I+F
Sbjct: 250 FGPPGTGKTLIARAVANETGSFFFLINGPEVMSKM-SGESESNLRKAFEECEKNQPAILF 308
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQR 613
+++ D A R + T + ++QLL +DG + + +V++A T ID AL+R
Sbjct: 309 IDEIDAIAPKREK---TNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRR 365
Query: 614 PGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEK 659
GR DR ++ P R +ILRI T + +L D VD ++A +
Sbjct: 366 FGRFDREIDIGIPDAVGRLEILRI---HTKNMKLADDVDLEQIANE 408
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 295 (108.9 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 65/206 (31%), Positives = 114/206 (55%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P D +++++ E+ E+V + +++P + + G + RGVL G G GKT LA
Sbjct: 475 VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLA 534
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVR++F AR AP ++F ++ D A RG
Sbjct: 535 KAIANECQANFISIKGPELLT-MWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 593
Query: 566 QFIHTKQQD-HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
+ INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 594 GGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIP 653
Query: 625 KPTQSEREKILRIAAQETMDEELIDL 650
P ++ R +IL+ + ++T + +DL
Sbjct: 654 LPDEASRHQILKASLRKTPLSKDLDL 679
Score = 262 (97.3 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 73/226 (32%), Positives = 116/226 (51%)
Query: 435 DPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
DPIK E + N I D V +I E+V L++P F+ +G + PRG+L+
Sbjct: 193 DPIKR--EEEEESMND-IGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILL 249
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G GTGKT +A A+A E + E+ + + G+S SN+R+ F+ P I+F
Sbjct: 250 FGPPGTGKTLIARAVANETGSFFFLINGPEVMSKM-SGESESNLRKAFEECEKNQPAILF 308
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQR 613
+++ D A R + T + ++QLL +DG + + +V++A T ID AL+R
Sbjct: 309 IDEIDAIAPKREK---TNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRR 365
Query: 614 PGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEK 659
GR DR ++ P R +ILRI T + +L D VD ++A +
Sbjct: 366 FGRFDREIDIGIPDAVGRLEILRI---HTKNMKLADDVDLEQIANE 408
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 311 (114.5 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 71/189 (37%), Positives = 111/189 (58%)
Query: 450 PPIPLKDFASVESMREEINEVVAFLQ-NPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
P + +D ++ ++ E V + Q + AF+ +G R P G+L+ G G KT +A A+
Sbjct: 719 PKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAV 778
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A+EA++ + V+ EL + WVG+S VR LF AR AP IIF ++ D A +RG+
Sbjct: 779 ASEAKLNFLAVKGPELFSK-WVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKE- 836
Query: 569 HTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+ + ++QLLVELDG ++ GV ++A T +ID AL RPGR DR+ + P +
Sbjct: 837 NDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNE 896
Query: 629 SEREKILRI 637
++RE IL+I
Sbjct: 897 TDREAILKI 905
Score = 239 (89.2 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 54/160 (33%), Positives = 89/160 (55%)
Query: 478 SAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNV 537
++ +G R +GVLI G GTGKTSLA A + V +V E+ ++G+S +
Sbjct: 408 NSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEI-ISQYLGESEKAL 466
Query: 538 RELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVL 597
E+F++A + P ++F++D D A R + ++ + + LL +DG + DGVV+
Sbjct: 467 DEVFRSASNATPAVVFIDDLDAIAPARKE---GGEELSQRMVATLLNLMDGISRTDGVVV 523
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI 637
+A T I+ AL+RPGR+DR + P+ ++R IL I
Sbjct: 524 IAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHI 563
Score = 37 (18.1 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 93 TPEDEVVKGFPEVELKWMFGD 113
+PE + FP +K +GD
Sbjct: 104 SPESRFSRSFPLSSIKAEYGD 124
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 307 (113.1 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 67/205 (32%), Positives = 112/205 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ E+V + +++P F + G +GVL G G GKT LA
Sbjct: 467 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 526
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 527 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 585
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
I + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 586 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 645
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P + R IL+ +++ + +DL
Sbjct: 646 PDEKSRVAILKANLRKSPVAKDVDL 670
Score = 215 (80.7 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 66/207 (31%), Positives = 103/207 (49%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P+ F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 205 DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 264
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARD-LAPVIIFVEDFDLFAGVRGQFIHTKQQ 573
+ E+ + L G+ S R+ A L IF D D F + T +
Sbjct: 265 FFFLINGPEIMSKL-AGEGESACRKKISPAPPPLKTAGIFKSD-DCFPSPQ-----THGE 317
Query: 574 DHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREK 633
++QLL +DG +++ V++MA T ID AL+R GR DR ++ P + R +
Sbjct: 318 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 377
Query: 634 ILRIAAQETMDEELIDLVDWRKVAEKT 660
IL+I T + +L D VD +VA +T
Sbjct: 378 ILQI---HTKNMKLADDVDLEQVANET 401
Score = 37 (18.1 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 19/102 (18%), Positives = 45/102 (44%)
Query: 144 RLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVSNKIVESAR 203
+L +DVD +Q + + D + S+ + + ++ + + +++ S
Sbjct: 387 KLADDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-DETIDAEVMNSLA 444
Query: 204 IRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+ D W A+ S +E V++ + V +ED GG +++
Sbjct: 445 VTMDDFRW-ALSQSNPSALRETVVEVPQ--VTWEDIGGLEDV 483
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 304 (112.1 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 66/205 (32%), Positives = 112/205 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P I +D ++ ++ E+ E+V + +++P F + G +GVL G G GKT LA
Sbjct: 469 VEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 529 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 588 GNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P + R IL+ +++ + +DL
Sbjct: 648 PDEKSRIAILKANLRKSPISKDVDL 672
Score = 284 (105.0 bits), Expect = 4.2e-21, P = 4.2e-21
Identities = 72/206 (34%), Positives = 114/206 (55%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D V +I E+V L++P+ F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 205 DIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 264
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + L G+S SN+R+ F+ A AP IIF+++ D A R + T +
Sbjct: 265 FFFLINGPEIMSKL-AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK---THGEV 320
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG +++ V++MA T ID AL+R GR DR ++ P + R +I
Sbjct: 321 ERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI 380
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
L+I T + +L D VD +VA +T
Sbjct: 381 LQI---HTKNMKLADDVDLEQVANET 403
Score = 40 (19.1 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 47/230 (20%), Positives = 91/230 (39%)
Query: 20 ELESAQRKHLEQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSRELQRNLEARIRK 78
E+ S E + + E E P + + D LD A+ K+ K E++R + +++
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD-AIAPKR-EKTHGEVERRIVSQLLT 330
Query: 79 NMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVV--PKAIGLHLYHGWKAWREE 136
M L +V + P + F D+EV + P A G L E
Sbjct: 331 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF-DREVDIGIPDATG-RL--------EI 380
Query: 137 AKADLKR-RLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVS 195
+ K +L +DVD +Q + + D + S+ + + ++ + +
Sbjct: 381 LQIHTKNMKLADDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-DETID 438
Query: 196 NKIVESARIRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+++ S + D W A+ S +E V++ + +ED GG D++
Sbjct: 439 AEVMNSLAVTMDDFRW-ALSQSNPSALRETVVEVPN--ITWEDIGGLDDV 485
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 305 (112.4 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 70/215 (32%), Positives = 116/215 (53%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ E+V + +++P F + G +GVL G G GKT LA
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 529 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
I + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
P + R IL+ +++ + D VD +A+ T
Sbjct: 648 PDEKSRVAILKANLRKSPVAKAGD-VDLEFLAKMT 681
Score = 279 (103.3 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 71/206 (34%), Positives = 113/206 (54%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P+ F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 205 DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 264
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + L G+S SN+R+ F+ A AP IIF+++ D A R + T +
Sbjct: 265 FFFLINGPEIMSKL-AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK---THGEV 320
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG +++ V++MA T ID AL+R GR DR ++ P + R +I
Sbjct: 321 ERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI 380
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
L+I T + +L D VD +VA +T
Sbjct: 381 LQI---HTKNMKLADDVDLEQVANET 403
Score = 39 (18.8 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 47/230 (20%), Positives = 92/230 (40%)
Query: 20 ELESAQRKHLEQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSRELQRNLEARIRK 78
E+ S E + + E E P + + D LD A+ K+ K E++R + +++
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD-AIAPKR-EKTHGEVERRIVSQLLT 330
Query: 79 NMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVV--PKAIGLHLYHGWKAWREE 136
M L +V + P + F D+EV + P A G L E
Sbjct: 331 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF-DREVDIGIPDATG-RL--------EI 380
Query: 137 AKADLKR-RLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVS 195
+ K +L +DVD +Q + + D + S+ + + ++ + +
Sbjct: 381 LQIHTKNMKLADDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-DETID 438
Query: 196 NKIVESARIRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+++ S + D W A+ S +E V++ + V +ED GG +++
Sbjct: 439 AEVMNSLAVTMDDFRW-ALSQSNPSALRETVVEVPQ--VTWEDIGGLEDV 485
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 304 (112.1 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 67/213 (31%), Positives = 113/213 (53%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E+++ E+ E V + +++P F++ G +GVL G G GKT LA
Sbjct: 472 VEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 531
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++V+ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 532 KAIANECQANFISVKGPELLT-MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 590
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ +NQLL E+DG + V ++ T ID AL RPGR+D++ +
Sbjct: 591 NSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPL 650
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDWRKVAE 658
P + R I + +++ + +D+ K +
Sbjct: 651 PDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQ 683
Score = 268 (99.4 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 70/227 (30%), Positives = 120/227 (52%)
Query: 435 DPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
+P+K E +R+ + D V +I E+V L++P F+ +G + P+G+L+
Sbjct: 191 EPVKREDE--ERLDE--VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 246
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G G+GKT +A A+A E + E+ + L G+S SN+R+ F+ A AP IIF
Sbjct: 247 YGPPGSGKTLIARAVANETGAFFFCINGPEIMSKL-AGESESNLRKAFEEAEKNAPSIIF 305
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQR 613
+++ D A R + T + ++QLL +DG + + V++M T ID AL+R
Sbjct: 306 IDEIDSIAPKREK---TNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRR 362
Query: 614 PGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
GR DR ++ P + R ++LRI T + +L + VD ++++ T
Sbjct: 363 FGRFDREIDIGVPDEIGRLEVLRI---HTKNMKLAEDVDLERISKDT 406
Score = 40 (19.1 bits), Expect = 3.5e-22, Sum P(2) = 3.5e-22
Identities = 14/62 (22%), Positives = 26/62 (41%)
Query: 89 FVVRTPED-EVVKGFPEVELKWMFGDKEVVVPKAIGLHLYHGWKAWREEAKADLKRRLLE 147
F + PE + G E L+ F + E P I + RE+ +++RR++
Sbjct: 270 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVS 329
Query: 148 DV 149
+
Sbjct: 330 QL 331
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 287 (106.1 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 65/195 (33%), Positives = 107/195 (54%)
Query: 444 MKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKT 502
MK K+P D +ES +EI E V L +P ++EMG + P+GV++ G GTGKT
Sbjct: 175 MKLDKSPTESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKT 234
Query: 503 SLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAG 562
LA A+A + + + EL ++G R++FQ A D AP I+F+++ D
Sbjct: 235 LLAKAVANQTSATFLRIVGSEL-IQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGT 293
Query: 563 VRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFN 622
R + +++ + + +LL +LDGF+ + + ++ T I+ +D AL RPGR+DR
Sbjct: 294 KRYESTSGGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKIL 353
Query: 623 LQKPTQSEREKILRI 637
+ P + ++KIL I
Sbjct: 354 FENPDANTKKKILTI 368
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 286 (105.7 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 81/238 (34%), Positives = 124/238 (52%)
Query: 435 DPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
DP+ N MK K P D +ES +EI E V L +P ++EMG + P+GV++
Sbjct: 174 DPMINV---MKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVIL 230
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G GTGKT LA A+A + + V EL ++G VR+LF A + +P I+F
Sbjct: 231 YGAPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPRLVRQLFNAAEEHSPSIVF 289
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFE--KQDGVVLMATTRNIKQIDEAL 611
+++ D R +++ + + +LL +LDGF+ ++D V+MAT R I +D AL
Sbjct: 290 IDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNR-ISDLDPAL 348
Query: 612 QRPGRMDRIFNLQKPTQSEREKILRIAAQ-----ETMD-EELIDLVDWRKVAEKTALL 663
RPGR+DR + P ++ + KI I E ++ EELI D AE A++
Sbjct: 349 IRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIV 406
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 285 (105.4 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 78/237 (32%), Positives = 124/237 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
N++V + DP+ MK K P D ++S +EI E V L +P
Sbjct: 153 NHKVHAVIGVLMDDTDPLVTV---MKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPE 209
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
++EMG + P+GV++ G GTGKT LA A+A + + V EL ++G VR
Sbjct: 210 YYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVR 268
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF+ A + AP I+F+++ D R +++ + + +LL +LDGF+ + V V+
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 328
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI-AAQETM--DEELIDLV 651
MAT R I+ +D AL RPGR+DR P + + +I +I ++ T+ D L DL+
Sbjct: 329 MATNR-IETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLI 384
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 306 (112.8 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 67/205 (32%), Positives = 112/205 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ E+V + +++P F + G +GVL G G GKT LA
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 529 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
I + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P + R IL+ +++ + +DL
Sbjct: 648 PDEKSRIAILKANLRKSPVAKDVDL 672
Score = 279 (103.3 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 71/206 (34%), Positives = 113/206 (54%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P+ F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 205 DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 264
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + L G+S SN+R+ F+ A AP IIF+++ D A R + T +
Sbjct: 265 FFFLINGPEIMSKL-AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK---THGEV 320
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG +++ V++MA T ID AL+R GR DR ++ P + R +I
Sbjct: 321 ERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEI 380
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
L+I T + +L D VD +VA +T
Sbjct: 381 LQI---HTKNMKLSDDVDLEQVANET 403
Score = 37 (18.1 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 45/227 (19%), Positives = 91/227 (40%)
Query: 20 ELESAQRKHLEQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSRELQRNLEARIRK 78
E+ S E + + E E P + + D LD A+ K+ K E++R + +++
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD-AIAPKR-EKTHGEVERRIVSQLLT 330
Query: 79 NMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVVPKAIGLHLYHGWKAWREEAK 138
M L +V + P + F D+EV IG+ G +
Sbjct: 331 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF-DREV----DIGIPDSTGRLEILQIHT 385
Query: 139 ADLKRRLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVSNKI 198
++K L +DVD +Q + + D + S+ + + ++ + + ++
Sbjct: 386 KNMK--LSDDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-DETIDAEV 441
Query: 199 VESARIRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+ S + D W A+ S +E V++ + V +ED GG +++
Sbjct: 442 MNSLAVTMDDFRW-ALSQSNPSALRETVVEVPQ--VTWEDIGGLEDV 485
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 304 (112.1 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 66/205 (32%), Positives = 112/205 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ ++V + +++P F + G +GVL G G GKT LA
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 529 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
I + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P + R IL+ +++ + +DL
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDL 672
Score = 279 (103.3 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 71/206 (34%), Positives = 113/206 (54%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P+ F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 205 DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 264
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + L G+S SN+R+ F+ A AP IIF+++ D A R + T +
Sbjct: 265 FFFLINGPEIMSKL-AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK---THGEV 320
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG +++ V++MA T ID AL+R GR DR ++ P + R +I
Sbjct: 321 ERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEI 380
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
L+I T + +L D VD +VA +T
Sbjct: 381 LQI---HTKNMKLADDVDLEQVANET 403
Score = 39 (18.8 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 47/230 (20%), Positives = 92/230 (40%)
Query: 20 ELESAQRKHLEQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSRELQRNLEARIRK 78
E+ S E + + E E P + + D LD A+ K+ K E++R + +++
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD-AIAPKR-EKTHGEVERRIVSQLLT 330
Query: 79 NMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVV--PKAIGLHLYHGWKAWREE 136
M L +V + P + F D+EV + P A G L E
Sbjct: 331 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF-DREVDIGIPDATG-RL--------EI 380
Query: 137 AKADLKR-RLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVS 195
+ K +L +DVD +Q + + D + S+ + + ++ + +
Sbjct: 381 LQIHTKNMKLADDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-DETID 438
Query: 196 NKIVESARIRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+++ S + D W A+ S +E V++ + V +ED GG +++
Sbjct: 439 AEVMNSLAVTMDDFRW-ALSQSNPSALRETVVEVPQ--VTWEDIGGLEDV 485
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 292 (107.8 bits), Expect = 4.6e-22, P = 4.6e-22
Identities = 74/246 (30%), Positives = 136/246 (55%)
Query: 448 KNPP--IPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSL 504
++PP + L D ++ + +++ ++V + P + + PRGVL+ G G GKT +
Sbjct: 156 RSPPTHVSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMI 215
Query: 505 ALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVR 564
A A AAE VP +++ A + +G+ G+S +RE F+ A+ LAP +IF+++ D R
Sbjct: 216 ANAFAAELGVPFISISAPSIVSGM-SGESEKALREHFEEAKRLAPCLIFIDEIDAITPKR 274
Query: 565 GQFIHTKQQDHESFINQLLVELD--GFEKQDG--VVLMATTRNIKQIDEALQRPGRMDRI 620
+++++ + + QLL +D EK DG V+++A T +D AL+R GR D+
Sbjct: 275 E---NSQREMEKRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKE 331
Query: 621 FNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLVPVALEGSAF 680
N+ P++ RE+ILR ++ L+D +D++ +A++T +L + V+ GS
Sbjct: 332 INMTVPSEPVREQILRALTRKM---RLVDDLDFKTLAKRTPGFVGADLNDL-VSTAGSTA 387
Query: 681 RSKFLD 686
++LD
Sbjct: 388 IKRYLD 393
Score = 257 (95.5 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 68/212 (32%), Positives = 110/212 (51%)
Query: 450 PPIPLKDFASVESMREEI-NEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
P D ++ +R+E+ +V +++P + +G AP GVL+ G G GKT LA A+
Sbjct: 464 PDTTWADIGALSGIRDELATAIVDPIKHPELYASVGITAPTGVLLWGPPGCGKTLLAKAV 523
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A E+R ++V+ EL +VG+S VR++F AR P +IF ++ D R
Sbjct: 524 ANESRANFISVKGPEL-LNKYVGESERAVRQVFVRARSSIPCVIFFDELDALVPRRDD-- 580
Query: 569 HTKQQDHESFINQLLVELDGF-EKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPT 627
T + +N LL ELDG + G+ ++A T ID A+ RPGR++ + + P+
Sbjct: 581 -TLSEASARVVNTLLTELDGLGSSRQGIYVIAATNRPDIIDPAMLRPGRLETLLFVNLPS 639
Query: 628 QSEREKILRIAAQETMDEELIDLVDWRKVAEK 659
ER +IL+ + E DL R++AE+
Sbjct: 640 PLERVEILQTLVRRLPIEFNEDL---RRLAEE 668
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 293 (108.2 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 80/269 (29%), Positives = 137/269 (50%)
Query: 423 VRRIKRKKKAGIDPIKNAFERMKRVKNPP-IPLKDFASVESMREEINEVVAF-LQNPSAF 480
V++ K++ K G +K +++K ++PP LK ++ + ++ E++ + +P F
Sbjct: 174 VKKSKKRSKEGTCKVKR--QKIKEDRSPPNSSLKSLGGMDDVVAQLMELIGLPILHPEIF 231
Query: 481 QEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVREL 540
G PRGVL+ G G GKTS+A A+A E +VP +++ A + +G+ G+S +R+L
Sbjct: 232 LSTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGM-SGESEKKIRDL 290
Query: 541 FQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGF--EKQDG--VV 596
F AR LAP ++F ++ D R +++ + QLL +D EK +G V+
Sbjct: 291 FDEARSLAPCLVFFDEIDAITPKRDG--GAQREMERRIVAQLLTSMDELTMEKTNGKPVI 348
Query: 597 LMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELID-LVDWRK 655
++ T +D AL+R GR DR L P + R IL+ + D ID +D+ K
Sbjct: 349 IIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILK----KMSDNLKIDGAIDFAK 404
Query: 656 VAEKTALLRPIELKLVPVALEGSAFRSKF 684
+A+ T +LK + A A + F
Sbjct: 405 LAKLTPGFVGADLKALVTAAGTCAIKRIF 433
Score = 273 (101.2 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 68/246 (27%), Positives = 123/246 (50%)
Query: 450 PPIPLKDFASVESMREEIN-EVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
P + + +++ +R E+N +V ++ P ++++G AP GVL+ G G GKT LA A+
Sbjct: 528 PDVTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAV 587
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A E+R ++++ EL +VG+S ++R++F AR P +IF ++ D R +
Sbjct: 588 ANESRANFISIKGPEL-LNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRRDTSL 646
Query: 569 HTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+ +N LL ELDG + G+ ++ T ID A+ RPGR+D+ ++ P
Sbjct: 647 ---SESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNT 703
Query: 629 SEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLVPVALEGS--AFRSKFLD 686
E+ I++ + + L VD+ ++ L + E S A + KF
Sbjct: 704 EEKLDIIKTLTK-SHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQ 762
Query: 687 TDELMS 692
++E+ S
Sbjct: 763 SEEIQS 768
Score = 52 (23.4 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 30 EQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSRELQRNLEARIRKNMKKLGNEK 87
E+ I E L P L + D +D A+ K+ RE++R + A++ +M +L EK
Sbjct: 284 EKKIRDLFDEARSLAPCLVFFDEID-AITPKRDGGAQREMERRIVAQLLTSMDELTMEK 341
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 293 (108.2 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 72/225 (32%), Positives = 121/225 (53%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEIN-EVVAFLQNPSAFQEMGARAPRGVL 492
+ ++ + +R V P + D ++E +REE+ ++A ++NP F+ +G AP GVL
Sbjct: 559 LSEVQPSAKREGFVTVPNVTWADVGALEDIREELTMAILAPVRNPEQFRALGLVAPAGVL 618
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G G GKT LA A+A E+ + ++V+ EL ++VG+S VR++FQ A++ AP +I
Sbjct: 619 LAGPPGCGKTLLAKAVANESGLNFISVKGPEL-LNMYVGESERAVRQVFQRAKNSAPCVI 677
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQ 612
F ++ D R + +NQLL E+DG E + V ++A T ID A+
Sbjct: 678 FFDEVDALCPRRSD---RETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAIL 734
Query: 613 RPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
RPGR+D+ + P ++R IL+ + L + VD +A
Sbjct: 735 RPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVDLEAIA 779
Score = 246 (91.7 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 67/232 (28%), Positives = 117/232 (50%)
Query: 410 RKLRRVKAYFNYRVRRIKRKKKAGIDPI--KNAFERMKRVKNPPIPLKDFASVESMREEI 467
++ R K N R ++ I+ I K A + ++ + +D ++ +E+
Sbjct: 217 KRKSRAKGKGNKRKTEGLQEADGEIEAILQKRAKAKSTELQISSVKFEDVGGNDATLKEV 276
Query: 468 NEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAG 527
+++ +++P +Q +G PRGVL+ G G GKT LA AIA E +P++ V A E+ +G
Sbjct: 277 CKMLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSG 336
Query: 528 LWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELD 587
+ G+S +R+LF A AP I+F+++ D R + +K + + QLL +D
Sbjct: 337 V-SGESEQKLRDLFDQAVSNAPCIVFIDEIDAITPKRE--VASKDMERR-IVAQLLTCMD 392
Query: 588 GFEKQDG---VVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILR 636
V+++ T +D AL+R GR DR L P ++ RE+IL+
Sbjct: 393 DLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLGIPDEASRERILQ 444
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 283 (104.7 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 72/245 (29%), Positives = 132/245 (53%)
Query: 434 IDPIKNAFE-RMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSA----FQEMGARAP 488
+D + + ++ R+K ++ P +D+ + + ++I E+V + P F+++G R P
Sbjct: 146 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPP 205
Query: 489 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLA 548
+GVL+ G GTGKT +A A AA+ + + +L +++G A VR+ FQ A++ A
Sbjct: 206 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL-VQMFIGDGAKLVRDAFQLAKEKA 264
Query: 549 PVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQID 608
P IIF+++ D R + ++ + + +LL +LDGF + + ++A T +D
Sbjct: 265 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILD 324
Query: 609 EALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIEL 668
AL R GR+DR PT+ R +IL+I +++ M+ D V++ ++A T +L
Sbjct: 325 PALMRSGRLDRKIEFPHPTEEARARILQIHSRK-MNVHP-D-VNFEELARSTDDFNGAQL 381
Query: 669 KLVPV 673
K V V
Sbjct: 382 KAVCV 386
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 281 (104.0 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 80/241 (33%), Positives = 125/241 (51%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
+Y + +I K +DP+ + M K P + ++ +EI EV+ +++P
Sbjct: 120 SYTLHKILPNK---VDPLVSL---MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G+ A VR
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKFIGEGARMVR 232
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF AR+ AP IIF+++ D R + + + + +LL +LDGFE + V+
Sbjct: 233 ELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 292
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
MAT R I +D AL RPGR+DR P + R IL+I +++ L ++ RK+A
Sbjct: 293 MATNR-IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM---NLTRGINLRKIA 348
Query: 658 E 658
E
Sbjct: 349 E 349
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 281 (104.0 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 80/241 (33%), Positives = 125/241 (51%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
+Y + +I K +DP+ + M K P + ++ +EI EV+ +++P
Sbjct: 120 SYTLHKILPNK---VDPLVSL---MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G+ A VR
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKFIGEGARMVR 232
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF AR+ AP IIF+++ D R + + + + +LL +LDGFE + V+
Sbjct: 233 ELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 292
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
MAT R I +D AL RPGR+DR P + R IL+I +++ L ++ RK+A
Sbjct: 293 MATNR-IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM---NLTRGINLRKIA 348
Query: 658 E 658
E
Sbjct: 349 E 349
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 281 (104.0 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 80/241 (33%), Positives = 125/241 (51%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
+Y + +I K +DP+ + M K P + ++ +EI EV+ +++P
Sbjct: 120 SYTLHKILPNK---VDPLVSL---MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G+ A VR
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKFIGEGARMVR 232
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF AR+ AP IIF+++ D R + + + + +LL +LDGFE + V+
Sbjct: 233 ELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 292
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
MAT R I +D AL RPGR+DR P + R IL+I +++ L ++ RK+A
Sbjct: 293 MATNR-IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM---NLTRGINLRKIA 348
Query: 658 E 658
E
Sbjct: 349 E 349
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 281 (104.0 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 80/241 (33%), Positives = 125/241 (51%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
+Y + +I K +DP+ + M K P + ++ +EI EV+ +++P
Sbjct: 120 SYTLHKILPNK---VDPLVSL---MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G+ A VR
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKFIGEGARMVR 232
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF AR+ AP IIF+++ D R + + + + +LL +LDGFE + V+
Sbjct: 233 ELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 292
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
MAT R I +D AL RPGR+DR P + R IL+I +++ L ++ RK+A
Sbjct: 293 MATNR-IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM---NLTRGINLRKIA 348
Query: 658 E 658
E
Sbjct: 349 E 349
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 281 (104.0 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 80/241 (33%), Positives = 125/241 (51%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
+Y + +I K +DP+ + M K P + ++ +EI EV+ +++P
Sbjct: 120 SYTLHKILPNK---VDPLVSL---MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G+ A VR
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKFIGEGARMVR 232
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF AR+ AP IIF+++ D R + + + + +LL +LDGFE + V+
Sbjct: 233 ELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 292
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
MAT R I +D AL RPGR+DR P + R IL+I +++ L ++ RK+A
Sbjct: 293 MATNR-IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM---NLTRGINLRKIA 348
Query: 658 E 658
E
Sbjct: 349 E 349
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 281 (104.0 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 80/241 (33%), Positives = 125/241 (51%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
+Y + +I K +DP+ + M K P + ++ +EI EV+ +++P
Sbjct: 120 SYTLHKILPNK---VDPLVSL---MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G+ A VR
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKFIGEGARMVR 232
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF AR+ AP IIF+++ D R + + + + +LL +LDGFE + V+
Sbjct: 233 ELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 292
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
MAT R I +D AL RPGR+DR P + R IL+I +++ L ++ RK+A
Sbjct: 293 MATNR-IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM---NLTRGINLRKIA 348
Query: 658 E 658
E
Sbjct: 349 E 349
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 281 (104.0 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 80/241 (33%), Positives = 125/241 (51%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
+Y + +I K +DP+ + M K P + ++ +EI EV+ +++P
Sbjct: 120 SYTLHKILPNK---VDPLVSL---MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G+ A VR
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKFIGEGARMVR 232
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF AR+ AP IIF+++ D R + + + + +LL +LDGFE + V+
Sbjct: 233 ELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 292
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
MAT R I +D AL RPGR+DR P + R IL+I +++ L ++ RK+A
Sbjct: 293 MATNR-IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM---NLTRGINLRKIA 348
Query: 658 E 658
E
Sbjct: 349 E 349
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 284 (105.0 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 77/237 (32%), Positives = 125/237 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
N++V + DP+ MK K P D +++ +EI E V L +P
Sbjct: 153 NHKVHAVIGVLMDDTDPLVTV---MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
++EMG + P+GV++ G GTGKT LA A+A + + V EL ++G VR
Sbjct: 210 YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVR 268
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF+ A + AP I+F+++ D R +++ + + +LL +LDGF+ + V V+
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 328
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI-AAQETM--DEELIDLV 651
MAT R I+ +D AL RPGR+DR P + +++I +I ++ T+ D L DL+
Sbjct: 329 MATNR-IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLI 384
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 284 (105.0 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 77/237 (32%), Positives = 125/237 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
N++V + DP+ MK K P D +++ +EI E V L +P
Sbjct: 153 NHKVHAVIGVLMDDTDPLVTV---MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
++EMG + P+GV++ G GTGKT LA A+A + + V EL ++G VR
Sbjct: 210 YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVR 268
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF+ A + AP I+F+++ D R +++ + + +LL +LDGF+ + V V+
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 328
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI-AAQETM--DEELIDLV 651
MAT R I+ +D AL RPGR+DR P + +++I +I ++ T+ D L DL+
Sbjct: 329 MATNR-IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLI 384
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 284 (105.0 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 77/237 (32%), Positives = 125/237 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
N++V + DP+ MK K P D +++ +EI E V L +P
Sbjct: 153 NHKVHAVIGVLMDDTDPLVTV---MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
++EMG + P+GV++ G GTGKT LA A+A + + V EL ++G VR
Sbjct: 210 YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVR 268
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF+ A + AP I+F+++ D R +++ + + +LL +LDGF+ + V V+
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 328
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI-AAQETM--DEELIDLV 651
MAT R I+ +D AL RPGR+DR P + +++I +I ++ T+ D L DL+
Sbjct: 329 MATNR-IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLI 384
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 284 (105.0 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 77/237 (32%), Positives = 125/237 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
N++V + DP+ MK K P D +++ +EI E V L +P
Sbjct: 153 NHKVHAVIGVLMDDTDPLVTV---MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
++EMG + P+GV++ G GTGKT LA A+A + + V EL ++G VR
Sbjct: 210 YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVR 268
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF+ A + AP I+F+++ D R +++ + + +LL +LDGF+ + V V+
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 328
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI-AAQETM--DEELIDLV 651
MAT R I+ +D AL RPGR+DR P + +++I +I ++ T+ D L DL+
Sbjct: 329 MATNR-IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLI 384
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 284 (105.0 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 77/237 (32%), Positives = 125/237 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
N++V + DP+ MK K P D +++ +EI E V L +P
Sbjct: 153 NHKVHAVIGVLMDDTDPLVTV---MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
++EMG + P+GV++ G GTGKT LA A+A + + V EL ++G VR
Sbjct: 210 YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVR 268
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF+ A + AP I+F+++ D R +++ + + +LL +LDGF+ + V V+
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 328
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI-AAQETM--DEELIDLV 651
MAT R I+ +D AL RPGR+DR P + +++I +I ++ T+ D L DL+
Sbjct: 329 MATNR-IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLI 384
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 284 (105.0 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 77/237 (32%), Positives = 125/237 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
N++V + DP+ MK K P D +++ +EI E V L +P
Sbjct: 153 NHKVHAVIGVLMDDTDPLVTV---MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
++EMG + P+GV++ G GTGKT LA A+A + + V EL ++G VR
Sbjct: 210 YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVR 268
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF+ A + AP I+F+++ D R +++ + + +LL +LDGF+ + V V+
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 328
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI-AAQETM--DEELIDLV 651
MAT R I+ +D AL RPGR+DR P + +++I +I ++ T+ D L DL+
Sbjct: 329 MATNR-IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLI 384
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 284 (105.0 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 77/237 (32%), Positives = 125/237 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
N++V + DP+ MK K P D +++ +EI E V L +P
Sbjct: 153 NHKVHAVIGVLMDDTDPLVTV---MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
++EMG + P+GV++ G GTGKT LA A+A + + V EL ++G VR
Sbjct: 210 YYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVR 268
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF+ A + AP I+F+++ D R +++ + + +LL +LDGF+ + V V+
Sbjct: 269 ELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 328
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI-AAQETMDEE--LIDLV 651
MAT R I+ +D AL RPGR+DR P + + +I +I ++ T+ E+ L DL+
Sbjct: 329 MATNR-IETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDLI 384
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 285 (105.4 bits), Expect = 5.7e-22, P = 5.7e-22
Identities = 68/217 (31%), Positives = 115/217 (52%)
Query: 435 DPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
DP+ + MK K P D +ES +E+ E V L +P ++EMG + P+GV++
Sbjct: 187 DPLVSV---MKLDKAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVIL 243
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G GTGKT LA A+A + + + EL ++G VR++FQ A + AP I+F
Sbjct: 244 YGAPGTGKTLLAKAVANQTSATFLRIVGSEL-IQKYLGDGPRLVRQIFQVAAEHAPSIVF 302
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQR 613
+++ D R +++ + + +LL +LDGF+ + V ++ T I+ +D AL R
Sbjct: 303 IDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIR 362
Query: 614 PGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDL 650
PGR+DR + P Q+ ++KI + + + +DL
Sbjct: 363 PGRIDRKILFENPDQNTKKKIFTLHTSKMSLGDDVDL 399
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 284 (105.0 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 71/207 (34%), Positives = 113/207 (54%)
Query: 444 MKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKT 502
MK K P D ++ +EI E V L +P ++EMG R P+GV++ G GTGKT
Sbjct: 177 MKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKT 236
Query: 503 SLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAG 562
LA A+A + + + EL ++G VRELF+ A + AP I+F+++ D
Sbjct: 237 LLAKAVANQTSATFLRIVGSEL-IQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGT 295
Query: 563 VRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEALQRPGRMDRIF 621
R +++ + + +LL +LDGF+ + V VLMAT R I+ +D AL RPGR+DR
Sbjct: 296 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNR-IESLDPALIRPGRIDRKI 354
Query: 622 NLQKPTQSEREKILRI-AAQETMDEEL 647
P + + +I +I ++ T+ +E+
Sbjct: 355 EFPLPDEKTKRRIFQIHTSRMTLGKEV 381
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 292 (107.8 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 82/272 (30%), Positives = 137/272 (50%)
Query: 427 KRKKKAGIDPIKNAFERMKR---VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQE 482
KRK K K ++ KR P I L VES+ ++ E++ + +P +
Sbjct: 165 KRKAKGSA---KTQLKKQKRKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSS 221
Query: 483 MGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQ 542
G PRGVL+ G G GKT++A A+A E +VP +N+ A + +G+ G+S +RE+F+
Sbjct: 222 TGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGM-SGESEKKLREIFE 280
Query: 543 TARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGF--EKQDG--VVLM 598
A+ +AP +IF+++ D R +++ + + QLL +D EK G VV++
Sbjct: 281 EAKQIAPCLIFMDEIDAITPKRDG--GAQREMEKRIVAQLLTLMDELTLEKTGGKPVVVI 338
Query: 599 ATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAE 658
T +D AL+R GR DR L P + +R IL+ A + + E + ++R++++
Sbjct: 339 GATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILK-AMTKNIKLENGEHFNYRELSK 397
Query: 659 KTALLRPIELKLVPVALEGSAFRSKFLDTDEL 690
T +LK + A SA + F EL
Sbjct: 398 LTPGYVGADLKSLVTAAGISAIKRIFETMSEL 429
Score = 273 (101.2 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 67/209 (32%), Positives = 111/209 (53%)
Query: 450 PPIPLKDFASVESMREEINE-VVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
P + ++ ++ +R E++ +V ++ P + ++G AP GVL+ G G GKT LA A+
Sbjct: 517 PDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAV 576
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A E+R ++++ EL +VG+S VR++FQ AR P IIF ++ D R
Sbjct: 577 ANESRANFISIKGPEL-LNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRRDT-- 633
Query: 569 HTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+ + +N LL ELDG + GV ++ T ID A+ RPGR+D+ ++ PT
Sbjct: 634 -SMSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTP 692
Query: 629 SEREKILRIAAQETMDEELIDLVDWRKVA 657
ER +IL+ + T + L VD ++
Sbjct: 693 EERLEILKTLVR-TSNSPLHANVDLNAIS 720
Score = 46 (21.3 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 408 NFRKLRRVK-AYFNYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKD 456
N+R+L ++ Y ++ + AGI IK FE M ++ +KD
Sbjct: 391 NYRELSKLTPGYVGADLKSLVTA--AGISAIKRIFETMSELQEESHSVKD 438
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 292 (107.8 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 82/272 (30%), Positives = 137/272 (50%)
Query: 427 KRKKKAGIDPIKNAFERMKR---VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQE 482
KRK K K ++ KR P I L VES+ ++ E++ + +P +
Sbjct: 165 KRKAKGSA---KTQLKKQKRKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSS 221
Query: 483 MGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQ 542
G PRGVL+ G G GKT++A A+A E +VP +N+ A + +G+ G+S +RE+F+
Sbjct: 222 TGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGM-SGESEKKLREIFE 280
Query: 543 TARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGF--EKQDG--VVLM 598
A+ +AP +IF+++ D R +++ + + QLL +D EK G VV++
Sbjct: 281 EAKQIAPCLIFMDEIDAITPKRDG--GAQREMEKRIVAQLLTLMDELTLEKTGGKPVVVI 338
Query: 599 ATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAE 658
T +D AL+R GR DR L P + +R IL+ A + + E + ++R++++
Sbjct: 339 GATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILK-AMTKNIKLENGEHFNYRELSK 397
Query: 659 KTALLRPIELKLVPVALEGSAFRSKFLDTDEL 690
T +LK + A SA + F EL
Sbjct: 398 LTPGYVGADLKSLVTAAGISAIKRIFETMSEL 429
Score = 273 (101.2 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 67/209 (32%), Positives = 111/209 (53%)
Query: 450 PPIPLKDFASVESMREEINE-VVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
P + ++ ++ +R E++ +V ++ P + ++G AP GVL+ G G GKT LA A+
Sbjct: 517 PDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAV 576
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A E+R ++++ EL +VG+S VR++FQ AR P IIF ++ D R
Sbjct: 577 ANESRANFISIKGPEL-LNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRRDT-- 633
Query: 569 HTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+ + +N LL ELDG + GV ++ T ID A+ RPGR+D+ ++ PT
Sbjct: 634 -SMSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTP 692
Query: 629 SEREKILRIAAQETMDEELIDLVDWRKVA 657
ER +IL+ + T + L VD ++
Sbjct: 693 EERLEILKTLVR-TSNSPLHANVDLNAIS 720
Score = 46 (21.3 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 408 NFRKLRRVK-AYFNYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKD 456
N+R+L ++ Y ++ + AGI IK FE M ++ +KD
Sbjct: 391 NYRELSKLTPGYVGADLKSLVTA--AGISAIKRIFETMSELQEESHSVKD 438
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 281 (104.0 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 80/241 (33%), Positives = 125/241 (51%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
+Y + +I K +DP+ + M K P + ++ +EI EV+ +++P
Sbjct: 126 SYTLHKILPNK---VDPLVSL---MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 179
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G+ A VR
Sbjct: 180 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKFIGEGARMVR 238
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF AR+ AP IIF+++ D R + + + + +LL +LDGFE + V+
Sbjct: 239 ELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 298
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
MAT R I +D AL RPGR+DR P + R IL+I +++ L ++ RK+A
Sbjct: 299 MATNR-IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM---NLTRGINLRKIA 354
Query: 658 E 658
E
Sbjct: 355 E 355
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 281 (104.0 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 80/241 (33%), Positives = 125/241 (51%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
+Y + +I K +DP+ + M K P + ++ +EI EV+ +++P
Sbjct: 128 SYTLHKILPNK---VDPLVSL---MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 181
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G+ A VR
Sbjct: 182 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKFIGEGARMVR 240
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF AR+ AP IIF+++ D R + + + + +LL +LDGFE + V+
Sbjct: 241 ELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 300
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
MAT R I +D AL RPGR+DR P + R IL+I +++ L ++ RK+A
Sbjct: 301 MATNR-IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM---NLTRGINLRKIA 356
Query: 658 E 658
E
Sbjct: 357 E 357
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 281 (104.0 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 80/241 (33%), Positives = 125/241 (51%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
+Y + +I K +DP+ + M K P + ++ +EI EV+ +++P
Sbjct: 128 SYTLHKILPNK---VDPLVSL---MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 181
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G+ A VR
Sbjct: 182 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKFIGEGARMVR 240
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF AR+ AP IIF+++ D R + + + + +LL +LDGFE + V+
Sbjct: 241 ELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 300
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
MAT R I +D AL RPGR+DR P + R IL+I +++ L ++ RK+A
Sbjct: 301 MATNR-IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM---NLTRGINLRKIA 356
Query: 658 E 658
E
Sbjct: 357 E 357
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 281 (104.0 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 79/240 (32%), Positives = 123/240 (51%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVL 492
+DP+ + M K P + ++ +EI EV+ +++P F +G P+GVL
Sbjct: 141 VDPLVSL---MMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 197
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G GTGKT LA A+A + V EL ++G+ A VRELF AR+ AP II
Sbjct: 198 LFGPPGTGKTLLARAVAHHTECTFIRVSGSEL-VQKFIGEGARMVRELFVMAREHAPSII 256
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEAL 611
F+++ D R + + + + +LL +LDGFE + V+MAT R I +D AL
Sbjct: 257 FMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNR-IDILDPAL 315
Query: 612 QRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLV 671
RPGR+DR P + R IL+I +++ L+ ++ K+AE+ E+K V
Sbjct: 316 LRPGRIDRKIEFPAPDEKARADILKIHSRKM---NLMRGINMAKIAEQIPGASGAEVKSV 372
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 291 (107.5 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 74/228 (32%), Positives = 120/228 (52%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVL 492
+ ++ + R +++P + D E +++++ E V + L + F +G R P+GVL
Sbjct: 527 LSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVL 586
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G G KT A AIA E + + V+ EL +VG+S VR++FQ AR +P +I
Sbjct: 587 LYGPPGCSKTITAKAIATETGLNFIAVKGPEL-FDKFVGESERAVRQVFQKARQASPSVI 645
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQ 612
F ++ D RG+ + + LL ELDG E V+++A T ID AL
Sbjct: 646 FFDEIDALTANRGE-----DNSSDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALM 700
Query: 613 RPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
RPGR+DR+ + P R++I++I A++ E +DL D +AEKT
Sbjct: 701 RPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDL-DL--IAEKT 745
Score = 271 (100.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 71/240 (29%), Positives = 118/240 (49%)
Query: 442 ERMKRVKNPP--IPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERG 498
E + PP + +++ +I ++V QNP F+ PRGVL+ G G
Sbjct: 264 EETQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPG 323
Query: 499 TGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFD 558
TGKT + A+AAEA V ++ + G ++G++ S +R++F+ AR P IIF+++ D
Sbjct: 324 TGKTMVMRAVAAEANAQVFTIDGPSV-VGKYLGETESRLRKIFEDARAHQPSIIFIDEID 382
Query: 559 LFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMD 618
A R + + + + LL LDG VV++A T IDEAL+RPGR++
Sbjct: 383 ALAPKRTEDV---SEAESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLE 439
Query: 619 RIFNLQKPTQSEREKILRI----AAQETMDEELIDLVDWRKV---AEKTALLRPIELKLV 671
+ + P +S R I+++ E D +L DL A+ A++R L+ +
Sbjct: 440 KEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAI 499
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 305 (112.4 bits), Expect = 7.8e-22, Sum P(3) = 7.8e-22
Identities = 70/213 (32%), Positives = 113/213 (53%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D ++ ++ E+ E+V + ++ P F + G RGVL G G GKT LA
Sbjct: 471 VEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLA 530
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + V+++ EL +W G+S +NVR++F AR AP I+F ++ D A RG
Sbjct: 531 KAIANECQANFVSIKGPELLT-MWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARG 589
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 590 GGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 649
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDWRKVAE 658
P R ILR +++ + +DL+ K+ E
Sbjct: 650 PDMPSRTAILRANLRKSPVAKDVDLMYLSKITE 682
Score = 274 (101.5 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 96/324 (29%), Positives = 158/324 (48%)
Query: 435 DPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
+PIK E + + + I D +I E+V L++P+ F+ +G + PRG+L+
Sbjct: 189 EPIKREDEE-ESLND--IGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 245
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G GTGKT +A A+A E + E+ + L G+S SN+R+ F+ A AP IIF
Sbjct: 246 YGPPGTGKTLVARAVANETGAFFFLINGPEIMSKL-AGESESNLRKAFEEAEKNAPAIIF 304
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQR 613
+++ D A R + T + ++QLL +DG +++ VV+MA T +D AL+R
Sbjct: 305 IDELDAIAPKREK---THGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRR 361
Query: 614 PGRMDRIFNLQKPTQSEREKILRIAAQ-----ETMDEELIDLVDWRKV-AEKTAL----- 662
GR DR ++ P + R +IL+I + E +D E I V A+ AL
Sbjct: 362 FGRFDREIDIGIPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAA 421
Query: 663 LRPIELKLVPVALEGSAFRSKFLDTDEL-MSYCGWFATFSGVVPKWFRKTKIVKKISRML 721
L+ I K+ + LE + + L++ + M W + S P R+T V ++ +
Sbjct: 422 LQAIRKKMTLIDLEDDSIDADLLNSLAVTMDDFKWALSQSN--PSALRET--VVEVPHVN 477
Query: 722 VDHLG-LTLTKEDLQNVVDLMEPY 744
+ +G L K +LQ +V Y
Sbjct: 478 WEDIGGLDEVKRELQELVQYPVEY 501
Score = 40 (19.1 bits), Expect = 7.8e-22, Sum P(3) = 7.8e-22
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 89 FVVRTPED-EVVKGFPEVELKWMFGDKEVVVPKAIGLHLYHGWKAWREEAKADLKRRLLE 147
F++ PE + G E L+ F + E P I + RE+ +++RR++
Sbjct: 269 FLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVS 328
Query: 148 DV 149
+
Sbjct: 329 QL 330
Score = 40 (19.1 bits), Expect = 7.8e-22, Sum P(3) = 7.8e-22
Identities = 23/102 (22%), Positives = 44/102 (43%)
Query: 144 RLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVSNKIVESAR 203
+L EDVD +Q A+ + D + S+ + + + + ++ ++ S
Sbjct: 391 KLSEDVDL-EQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLEDD-SIDADLLNSLA 448
Query: 204 IRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+ D W A+ S +E V++ V +ED GG DE+
Sbjct: 449 VTMDDFKW-ALSQSNPSALRETVVEVPH--VNWEDIGGLDEV 487
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 286 (105.7 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 75/248 (30%), Positives = 133/248 (53%)
Query: 434 IDPIKNAFE-RMKRVKNPPIPLKDFASVESMREEINE----VVAFLQNPSAFQEMGARAP 488
ID + + ++ R+K ++ P + ++ + + ++I E +V +Q F+++G + P
Sbjct: 160 IDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPP 219
Query: 489 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLA 548
+G L+ G GTGKT LA A AA++ + + A +L +++G A VR+ F A++ +
Sbjct: 220 KGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQL-VQMFIGDGAKLVRDAFALAKEKS 278
Query: 549 PVIIFVEDFDLFAGVRGQFIHTKQQDHE--SFINQLLVELDGFEKQDGVVLMATTRNIKQ 606
P IIF+++ D G + +F K D E + +LL +LDGF D V ++A T +
Sbjct: 279 PAIIFIDELDAI-GTK-RFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDT 336
Query: 607 IDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQE-TMDEELIDLVDWRKVAEKTALLRP 665
+D AL R GR+DR P + R ILRI +++ +D++ ++W ++A T
Sbjct: 337 LDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDD----INWEELARSTDEYNG 392
Query: 666 IELKLVPV 673
LK V V
Sbjct: 393 AMLKSVCV 400
Score = 38 (18.4 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 14 RSDIQEELESAQRKHLEQMILP----SIVEVEDLGP 45
+S + E+++ Q K +LP ++VE+ D+ P
Sbjct: 64 KSTMLEKIKENQEKISNNKMLPYLVGNVVEILDMQP 99
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 293 (108.2 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 74/213 (34%), Positives = 113/213 (53%)
Query: 448 KNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQE-MGARAPRGVLIVGERGTGKTSLA 505
K P + D + +++ EI + + L++P F +G R+ G+L+ G GTGKT LA
Sbjct: 912 KIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFASGIGKRS--GILLFGPPGTGKTLLA 969
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++V+ EL +++G+S N+RE+F AR P +IF ++ D A RG
Sbjct: 970 KAIATECSLNFLSVKGPEL-INMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRG 1028
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ + ++QLL ELDG +K V ++ T +D +L RPGR+DR+ L
Sbjct: 1029 NGADSGGV-MDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLG- 1086
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDWRKVAE 658
SE+E +I T L D VD RKV E
Sbjct: 1087 -ISSEKENQFKILQALTRKFNLADDVDLRKVVE 1118
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 291 (107.5 bits), Expect = 8.9e-22, P = 8.9e-22
Identities = 76/226 (33%), Positives = 121/226 (53%)
Query: 450 PPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
P + D +ES++ ++ + V + L++P +F MG + P+GVL+ G G KT +A A+
Sbjct: 622 PNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKAL 681
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A E+ + + ++ EL +VG+S VRE F+ AR +AP IIF ++ D A RG +
Sbjct: 682 ANESGLNFLAIKGPEL-MNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSL 740
Query: 569 HTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+ + QLL E+DG E+ V ++A T +ID+AL RPGR+DRI + P
Sbjct: 741 GAGNVA-DRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDA 799
Query: 629 SEREKILRI------AAQETMDEELIDLVDWRKVAEKTALLRPIEL 668
+ R +I ++ + E +ELI D AE A+ R L
Sbjct: 800 ATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCREAAL 845
Score = 216 (81.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 64/223 (28%), Positives = 107/223 (47%)
Query: 438 KNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGE 496
KN+ E+ + K + + S + I E++ L+ P F+ G APRGVL+ G
Sbjct: 339 KNSKEQDNQFK---VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGP 395
Query: 497 RGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVED 556
GTGKT +A A+A E V + E+ + + G++ + +R++F A P IIF+++
Sbjct: 396 PGTGKTMIARAVANEVGAYVSVINGPEIISKFY-GETEAKLRQIFAEATLRHPSIIFIDE 454
Query: 557 FDLFAGVRGQFIHTKQQDHESFINQLLVELDGF--EKQDGVVL-MATTRNIKQIDEALQR 613
D R + + + + LL +DG E +G VL + T +D AL+R
Sbjct: 455 LDALCPKREG---AQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRR 511
Query: 614 PGRMDRIFNLQKPTQSER----EKILRIAAQETMDEELIDLVD 652
PGR D+ + P +R +K+LR + EL+ L +
Sbjct: 512 PGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLAN 554
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 279 (103.3 bits), Expect = 8.9e-22, P = 8.9e-22
Identities = 82/254 (32%), Positives = 130/254 (51%)
Query: 407 PNFRKLRRVKAYFNYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREE 466
PN R R ++Y +++ + K +DP+ + M K P + ++ +E
Sbjct: 109 PNCRVALRNESYTLHKI--LPNK----VDPLVSL---MMVEKVPDSTYEMVGGLDKQIKE 159
Query: 467 INEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELE 525
I EV+ +++P F +G P+GVL+ G GTGKT LA A+A + V EL
Sbjct: 160 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL- 218
Query: 526 AGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVE 585
++G+ + VRELF AR+ AP IIF+++ D R + + + + +LL +
Sbjct: 219 VQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQ 278
Query: 586 LDGFEKQDGV-VLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMD 644
LDGFE + V+MAT R I +D AL RPGR+DR P + R IL+I +++
Sbjct: 279 LDGFEATKNIKVIMATNR-IDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM-- 335
Query: 645 EELIDLVDWRKVAE 658
L ++ RK+AE
Sbjct: 336 -NLTRGINLRKIAE 348
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 282 (104.3 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 75/234 (32%), Positives = 124/234 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
N++V + DP+ MK K P D +++ +EI E V L +P
Sbjct: 151 NHKVHAVIGVLMDDTDPLVTV---MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 207
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
++EMG + P+GV++ G GTGKT LA A+A + + V EL ++G VR
Sbjct: 208 YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVR 266
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF+ A + AP I+F+++ D R +++ + + +LL +LDGF+ + V V+
Sbjct: 267 ELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 326
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI-AAQETM-DEELID 649
MAT R I+ +D AL RPGR+DR P + +++I +I ++ T+ D+ +D
Sbjct: 327 MATNR-IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLD 379
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 282 (104.3 bits), Expect = 9.2e-22, P = 9.2e-22
Identities = 74/231 (32%), Positives = 121/231 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
N++V + DP+ MK K P D +++ +EI E V L +P
Sbjct: 152 NHKVHAVVGVLSDDTDPMVTV---MKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPE 208
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
++EMG + P+GV++ G GTGKT LA A+A + + V EL ++G VR
Sbjct: 209 YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVR 267
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF+ A + AP I+F+++ D R +++ + + +LL +LDGF+ + V V+
Sbjct: 268 ELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 327
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI-AAQETMDEEL 647
MAT R I+ +D AL RPGR+DR P + + +I I ++ T+ E++
Sbjct: 328 MATNR-IETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDV 377
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 282 (104.3 bits), Expect = 9.2e-22, P = 9.2e-22
Identities = 75/234 (32%), Positives = 124/234 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
N++V + DP+ MK K P D +++ +EI E V L +P
Sbjct: 152 NHKVHAVIGVLMDDTDPLVTV---MKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 208
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
++EMG + P+GV++ G GTGKT LA A+A + + V EL ++G VR
Sbjct: 209 YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVR 267
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF+ A + AP I+F+++ D R +++ + + +LL +LDGF+ + V V+
Sbjct: 268 ELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 327
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI-AAQETM-DEELID 649
MAT R I+ +D AL RPGR+DR P + +++I +I ++ T+ D+ +D
Sbjct: 328 MATNR-IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLD 380
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 303 (111.7 bits), Expect = 9.2e-22, Sum P(2) = 9.2e-22
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + +D +E ++ E+ E+V + +++P F + G +GVL G G GKT LA
Sbjct: 469 VEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 528
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 529 KAIANECQANFISIKGPELLT-MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
I + INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDW 653
P + R IL+ +++ + +D VD+
Sbjct: 648 PDEKSRMAILKANLRKSPVAKDVD-VDF 674
Score = 279 (103.3 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 71/206 (34%), Positives = 113/206 (54%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D +I E+V L++P+ F+ +G + PRG+L+ G GTGKT +A A+A E
Sbjct: 205 DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA 264
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + L G+S SN+R+ F+ A AP IIF+++ D A R + T +
Sbjct: 265 FFFLINGPEIMSKL-AGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK---THGEV 320
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG +++ V++MA T ID AL+R GR DR ++ P + R +I
Sbjct: 321 ERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEI 380
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
L+I T + +L D VD +VA +T
Sbjct: 381 LQI---HTKNMKLSDDVDLEQVANET 403
Score = 37 (18.1 bits), Expect = 9.2e-22, Sum P(2) = 9.2e-22
Identities = 45/227 (19%), Positives = 91/227 (40%)
Query: 20 ELESAQRKHLEQMILPSIVEVEDLGP-LFYQDSLDFALRIKQCLKDSRELQRNLEARIRK 78
E+ S E + + E E P + + D LD A+ K+ K E++R + +++
Sbjct: 273 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD-AIAPKR-EKTHGEVERRIVSQLLT 330
Query: 79 NMKKLGNEKRFVVRTPEDEVVKGFPEVELKWMFGDKEVVVPKAIGLHLYHGWKAWREEAK 138
M L +V + P + F D+EV IG+ G +
Sbjct: 331 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRF-DREV----DIGIPDSTGRLEILQIHT 385
Query: 139 ADLKRRLLEDVDFGKQYVAQRQERILLDRDRVVSKTWYNEDKSRWEMDPVAVPYAVSNKI 198
++K L +DVD +Q + + D + S+ + + ++ + + ++
Sbjct: 386 KNMK--LSDDVDL-EQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE-DETIDAEV 441
Query: 199 VESARIRHD---WGAMYLSLKGDDKEFYVDIKEFEVLFEDFGGFDEL 242
+ S + D W A+ S +E V++ + V +ED GG +++
Sbjct: 442 MNSLAVTMDDFRW-ALSQSNPSALRETVVEVPQ--VTWEDIGGLEDV 485
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 300 (110.7 bits), Expect = 9.8e-22, Sum P(3) = 9.8e-22
Identities = 67/205 (32%), Positives = 109/205 (53%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P +D +E ++ E+ E V + +++P F++ G + +GVL G G GKT LA
Sbjct: 467 VEVPTTTWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLA 526
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++++ EL +W G+S +NVRELF AR AP ++F ++ D A RG
Sbjct: 527 KAIANECQANFISIKGPELLT-MWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRG 585
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ INQ+L E+DG + V ++ T ID A+ RPGR+D++ +
Sbjct: 586 SSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 645
Query: 626 PTQSEREKILRIAAQETMDEELIDL 650
P R IL+ ++ + +DL
Sbjct: 646 PDLPSRVAILKACLNKSPVAKDVDL 670
Score = 268 (99.4 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 68/206 (33%), Positives = 110/206 (53%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
D V +I E+V L++P F+ +G + P+G+L+ G G GKT +A A+A E
Sbjct: 203 DIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGA 262
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ E+ + L G+S SN+R+ F+ A AP IIF+++ D A R + T+ +
Sbjct: 263 FFFLINGPEIMSKL-AGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK---TQGEV 318
Query: 575 HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKI 634
++QLL +DG + + V++M T ID AL+R GR DR ++ P + R +I
Sbjct: 319 ERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLEI 378
Query: 635 LRIAAQETMDEELIDLVDWRKVAEKT 660
+RI T + +L + VD VA +T
Sbjct: 379 MRI---HTKNMKLDETVDLEAVANET 401
Score = 43 (20.2 bits), Expect = 9.8e-22, Sum P(3) = 9.8e-22
Identities = 14/62 (22%), Positives = 28/62 (45%)
Query: 89 FVVRTPED-EVVKGFPEVELKWMFGDKEVVVPKAIGLHLYHGWKAWREEAKADLKRRLLE 147
F++ PE + G E L+ F + E P I + RE+ + +++RR++
Sbjct: 265 FLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEVERRIVS 324
Query: 148 DV 149
+
Sbjct: 325 QL 326
Score = 41 (19.5 bits), Expect = 9.8e-22, Sum P(3) = 9.8e-22
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 182 RWEMDPVAVP-YAVSNKIVESARIRHDWGAMYLSLKGDD--KEFYVDIKEFEVLFEDFGG 238
R +MD + + +S +I+ES + D L+L +E V++ +ED GG
Sbjct: 422 REKMDVIDLEDETISAEILESMSVTQDHFRTALTLSNPSALRETVVEVPT--TTWEDIGG 479
Query: 239 FD 240
+
Sbjct: 480 LE 481
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 286 (105.7 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 68/204 (33%), Positives = 113/204 (55%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEIN-EVVAFLQNPSAFQEMGARAPRGVL 492
+ ++ + +R V P + D ++E +REE+ ++A ++NP F+ +G P GVL
Sbjct: 284 LSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVL 343
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G G GKT LA A+A E+ + ++V+ EL ++VG+S VR++FQ A++ AP +I
Sbjct: 344 LAGPPGCGKTLLAKAVANESGLNFISVKGPEL-LNMYVGESERAVRQVFQRAKNSAPCVI 402
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQ 612
F ++ D R + +NQLL E+DG E + V +MA T ID A+
Sbjct: 403 FFDEVDALCPRRSD---RETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAIL 459
Query: 613 RPGRMDRIFNLQKPTQSEREKILR 636
RPGR+D+ + P ++R IL+
Sbjct: 460 RPGRLDKTLFVGLPPPADRLAILK 483
Score = 152 (58.6 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 500 GKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDL 559
G + + + E +P++ V A E+ +G+ G+S +RELF+ A AP IIF+++ D
Sbjct: 34 GSSGPPTSASRELDLPILKVAAPEIVSGV-SGESEQKLRELFEQAVSNAPCIIFIDEIDA 92
Query: 560 FAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDG---VVLMATTRNIKQIDEALQRPGR 616
R + +K + + QLL +D V+++ T +D AL+R GR
Sbjct: 93 ITPKRE--VASKDMERR-IVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGR 149
Query: 617 MDRIFNLQKPTQSEREKILR 636
DR L P ++ RE+IL+
Sbjct: 150 FDREICLGIPDEASRERILQ 169
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 278 (102.9 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 77/249 (30%), Positives = 124/249 (49%)
Query: 404 RRDPNFRKLRR-VKAYFNYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVES 462
RR N +L++ + + I R+ +DP+ +M I D +
Sbjct: 101 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPL---VYKMSHEDPGNISYSDVGGLAE 157
Query: 463 MREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEA 521
E+ EVV L NP F+ +G P+G L+ G GTGKT LA A+A++ + V +
Sbjct: 158 QIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVS 217
Query: 522 QELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQ 581
+ ++G+SA +RE+F ARD P I+F+++ D G R + ++ + + +
Sbjct: 218 SAI-VDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLME 276
Query: 582 LLVELDGFEKQDGV-VLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQ 640
LL +LDGF+ V V+MAT R +D AL RPGR+DR + P + R +IL+I +
Sbjct: 277 LLNQLDGFDSLGKVKVIMATNRP-DTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSN 335
Query: 641 ETMDEELID 649
+ ID
Sbjct: 336 KITKHGEID 344
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 278 (102.9 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 77/249 (30%), Positives = 124/249 (49%)
Query: 404 RRDPNFRKLRR-VKAYFNYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVES 462
RR N +L++ + + I R+ +DP+ +M I D +
Sbjct: 101 RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPL---VYKMSHEDPGNISYSDVGGLAE 157
Query: 463 MREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEA 521
E+ EVV L NP F+ +G P+G L+ G GTGKT LA A+A++ + V +
Sbjct: 158 QIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVS 217
Query: 522 QELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQ 581
+ ++G+SA +RE+F ARD P I+F+++ D G R + ++ + + +
Sbjct: 218 SAI-VDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLME 276
Query: 582 LLVELDGFEKQDGV-VLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQ 640
LL +LDGF+ V V+MAT R +D AL RPGR+DR + P + R +IL+I +
Sbjct: 277 LLNQLDGFDSLGKVKVIMATNRP-DTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSN 335
Query: 641 ETMDEELID 649
+ ID
Sbjct: 336 KITKHGEID 344
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 295 (108.9 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 69/209 (33%), Positives = 114/209 (54%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEIN-EVVAFLQNPSAFQEMGARAPRGVL 492
+ ++ + +R V P + D ++E +REE+ ++A ++NP F+ +G P GVL
Sbjct: 560 LSSVQPSAKREGFVTIPDVTWADIGALEDVREELTMAILAPVRNPEQFKALGLTTPAGVL 619
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G G GKT LA A+A E+ + ++V+ EL ++VG+S VR++FQ AR+ AP +I
Sbjct: 620 LAGPPGCGKTLLAKAVANESGLNFISVKGPEL-LNMYVGESERAVRQVFQRARNSAPCVI 678
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQ 612
F ++ D R + +NQLL E+DG E + V +MA T ID A+
Sbjct: 679 FFDEVDALCPRRSD---RESGASVRVVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAIL 735
Query: 613 RPGRMDRIFNLQKPTQSEREKILRIAAQE 641
RPGR+D+ + P +R IL+ ++
Sbjct: 736 RPGRLDKTLYVGLPPPEDRLAILKTITKD 764
Score = 241 (89.9 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 73/224 (32%), Positives = 113/224 (50%)
Query: 424 RRIKRKKK-AGIDP-IKNAFERMK-RVKNPPI--PLKDFASVESMREEINEVVAFL---Q 475
+R KRKK+ +D I++ + K + K P + P F V E + E+ L +
Sbjct: 221 KRAKRKKEFPDVDEEIESILLKGKVKSKGPELYHPSVKFEDVGGNDETLKEICKMLIHVR 280
Query: 476 NPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAS 535
+P + +G PRG L+ G G GKT LA AIA E +P++ V A E+ +G+ G+S
Sbjct: 281 HPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATEMVSGV-SGESEQ 339
Query: 536 NVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDG- 594
+RELF A AP ++F+++ D R + +K + + QLL LD
Sbjct: 340 KLRELFDQAVLNAPCVLFIDEIDAITPKRE--VASKDMERR-IVAQLLTCLDDLNNVAAT 396
Query: 595 --VVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILR 636
V+++ T +D AL+R GR DR L P ++ REKIL+
Sbjct: 397 AQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAAREKILQ 440
Score = 44 (20.5 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 215 LKGDDKEFYVDIKEFEVLFEDFGGFDE 241
LKG K ++ V FED GG DE
Sbjct: 241 LKGKVKSKGPELYHPSVKFEDVGGNDE 267
Score = 39 (18.8 bits), Expect = 5.4e-21, Sum P(2) = 5.4e-21
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 99 VKGFPEVELKWMFGDKEVVVPKAIGLHLYHGWKAWREEAKADLKRRLL 146
V G E +L+ +F + P + + RE A D++RR++
Sbjct: 333 VSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKREVASKDMERRIV 380
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 279 (103.3 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 66/206 (32%), Positives = 112/206 (54%)
Query: 444 MKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKT 502
MK K+P D +ES +EI E V L +P ++EMG + P+GV++ G GTGKT
Sbjct: 171 MKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKT 230
Query: 503 SLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAG 562
LA A+A + + + EL ++G R++F+ A + AP I+F+++ D
Sbjct: 231 LLAKAVANQTSATFLRIVGSEL-IQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGT 289
Query: 563 VRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFN 622
R +++ + + +LL +LDGF+ + V ++ T I+ +D AL RPGR+DR
Sbjct: 290 KRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKIL 349
Query: 623 LQKPTQSEREKILRI-AAQETMDEEL 647
+ P S ++KIL I ++ + E++
Sbjct: 350 FENPDLSTKKKILGIHTSKMNLSEDV 375
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 279 (103.3 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 74/234 (31%), Positives = 123/234 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
N++V + DP+ MK K P D +++ +EI E V L +P
Sbjct: 153 NHKVHAVIGVLMDDTDPLVTV---MKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPE 209
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
++EMG + P+GV++ G GTGKT LA A+A + + V EL ++G VR
Sbjct: 210 YYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-IQKYLGDGPKLVR 268
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF+ A + P I+F+++ D R +++ + + +LL +LDGF+ + V V+
Sbjct: 269 ELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 328
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI-AAQETM-DEELID 649
MAT R I+ +D AL RPGR+DR P + +++I +I ++ T+ D+ +D
Sbjct: 329 MATNR-IETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLD 381
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 277 (102.6 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 71/245 (28%), Positives = 131/245 (53%)
Query: 434 IDPIKNAFE-RMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSA----FQEMGARAP 488
+D + + ++ R+K ++ P +D+ + + ++I E+V + P F+++G R P
Sbjct: 145 LDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPP 204
Query: 489 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLA 548
+GVL+ G GTGKT +A A AA+ + + +L +++G A VR+ F A++ +
Sbjct: 205 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL-VQMFIGDGAKLVRDAFLLAKEKS 263
Query: 549 PVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQID 608
P IIF+++ D R + ++ + + +LL +LDGF D + ++A T +D
Sbjct: 264 PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 323
Query: 609 EALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIEL 668
AL R GR+DR PT+ R +IL+I +++ M+ D V++ ++A T +L
Sbjct: 324 PALMRSGRLDRKIEFPHPTEEARGRILQIHSRK-MNVNA-D-VNFEELARSTDDFNGAQL 380
Query: 669 KLVPV 673
K V V
Sbjct: 381 KAVCV 385
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 286 (105.7 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 68/204 (33%), Positives = 112/204 (54%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEIN-EVVAFLQNPSAFQEMGARAPRGVL 492
+ ++ + +R V P + D ++E +REE+ ++A +++P F+ +G P GVL
Sbjct: 554 LSSVQPSAKREGFVTVPSVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVL 613
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G G GKT LA A+A E+ + ++V+ EL ++VG+S VR++FQ AR AP +I
Sbjct: 614 LAGPPGCGKTLLAKAVANESGLNFISVKGPEL-LNMYVGESERAVRQVFQRARSSAPCVI 672
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQ 612
F ++ D R + +NQLL E+DG E + V +MA T ID A+
Sbjct: 673 FFDEVDALCPRRSD---RETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAIL 729
Query: 613 RPGRMDRIFNLQKPTQSEREKILR 636
RPGR+D+ + P ++R IL+
Sbjct: 730 RPGRLDKTLFVGLPPPADRLAILK 753
Score = 245 (91.3 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 66/236 (27%), Positives = 124/236 (52%)
Query: 406 DPNFRKLRRVKAYFNYRVRRIKRKKKAGIDPI--KNAFERMKRVKNPPIPLKDFASVESM 463
+ N ++ R+++ N R + ++ + I+ + K A + ++ + +D ++
Sbjct: 209 ESNEKRKGRLRSKGNKRKKDVQ-EADGEIEGVLHKKAKAKGLELQVSRVKFEDVGGNDAT 267
Query: 464 REEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQE 523
+E+ +++ +++P + +GA PRGVL+ G G GKT LA AIA E +P++ V A E
Sbjct: 268 LKEVCKMLIHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATE 327
Query: 524 LEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLL 583
+ +G+ G+S +RELF+ A AP ++F+++ D R + +K + + QLL
Sbjct: 328 VVSGV-SGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKRE--VASKDMERR-IVAQLL 383
Query: 584 VELDGFEKQDG---VVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILR 636
+D V+++ T +D AL+R GR DR L P ++ RE+IL+
Sbjct: 384 TCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQ 439
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 286 (105.7 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 67/188 (35%), Positives = 104/188 (55%)
Query: 450 PPIPLKDFASVESMREEINEVVAFLQ-NPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
P + D ++E +REE+ + FL NP F+ +G P GVL+ G G GKT LA A+
Sbjct: 575 PNVTWADIGALEDIREELTMAILFLLCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAV 634
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A E+ + ++V+ EL ++VG+S VR++FQ A++ AP +IF ++ D R
Sbjct: 635 ANESGLNFISVKGPEL-LNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSA-- 691
Query: 569 HTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+ +NQLL E+DG E + V +MA T ID A+ RPGR+D+ + P
Sbjct: 692 -RETGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP 750
Query: 629 SEREKILR 636
++R IL+
Sbjct: 751 ADRLAILK 758
Score = 248 (92.4 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 68/221 (30%), Positives = 113/221 (51%)
Query: 428 RKKKAGIDPIKNAFERM--KRVKNPPIPLK-------DFASVESMREEINEVVAFLQNPS 478
+KKK + + E + KR K + L+ D ++ +E+ +++ +++P
Sbjct: 228 KKKKEDLQEVDGEIEAVLQKRAKAKGLELQISSVKFEDVGGNDTTLKEVCKMLVHMRHPE 287
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
+ +G PRGVL+ G G GKT LA AIA E +P++ V A E+ +G+ G+S +R
Sbjct: 288 VYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGV-SGESEQKLR 346
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDG---V 595
ELF+ A AP I+F+++ D R I +K + + QLL +D V
Sbjct: 347 ELFEQAVSSAPCILFIDEIDAITPKRE--IASKDMERR-IVAQLLTCMDDLNNVAATARV 403
Query: 596 VLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILR 636
+++ T +D AL+R GR DR L P ++ RE+IL+
Sbjct: 404 LVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQ 444
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 286 (105.7 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 68/204 (33%), Positives = 112/204 (54%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEIN-EVVAFLQNPSAFQEMGARAPRGVL 492
+ ++ + +R V P + D ++E +REE+ ++A +++P F+ +G P GVL
Sbjct: 559 LSSVQPSAKREGFVTVPSVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVL 618
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G G GKT LA A+A E+ + ++V+ EL ++VG+S VR++FQ AR AP +I
Sbjct: 619 LAGPPGCGKTLLAKAVANESGLNFISVKGPEL-LNMYVGESERAVRQVFQRARSSAPCVI 677
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQ 612
F ++ D R + +NQLL E+DG E + V +MA T ID A+
Sbjct: 678 FFDEVDALCPRRSD---RETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAIL 734
Query: 613 RPGRMDRIFNLQKPTQSEREKILR 636
RPGR+D+ + P ++R IL+
Sbjct: 735 RPGRLDKTLFVGLPPPADRLAILK 758
Score = 245 (91.3 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 66/236 (27%), Positives = 124/236 (52%)
Query: 406 DPNFRKLRRVKAYFNYRVRRIKRKKKAGIDPI--KNAFERMKRVKNPPIPLKDFASVESM 463
+ N ++ R+++ N R + ++ + I+ + K A + ++ + +D ++
Sbjct: 209 ESNEKRKGRLRSKGNKRKKDVQ-EADGEIEGVLHKKAKAKGLELQVSRVKFEDVGGNDAT 267
Query: 464 REEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQE 523
+E+ +++ +++P + +GA PRGVL+ G G GKT LA AIA E +P++ V A E
Sbjct: 268 LKEVCKMLIHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATE 327
Query: 524 LEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLL 583
+ +G+ G+S +RELF+ A AP ++F+++ D R + +K + + QLL
Sbjct: 328 VVSGV-SGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKRE--VASKDMERR-IVAQLL 383
Query: 584 VELDGFEKQDG---VVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILR 636
+D V+++ T +D AL+R GR DR L P ++ RE+IL+
Sbjct: 384 TCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQ 439
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 268 (99.4 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 62/212 (29%), Positives = 110/212 (51%)
Query: 444 MKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKT 502
+ + + P + D + ++EI E V L + ++++G PRGVL+ G GTGKT
Sbjct: 144 LSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKT 203
Query: 503 SLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAG 562
LA A+A + V E ++G+ VR++F+ A++ AP IIF+++ D A
Sbjct: 204 MLAKAVANHTTAAFIRVVGSEF-VQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIAT 262
Query: 563 VRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEALQRPGRMDRIF 621
R ++ + + +LL ++DGF++ V V+MAT R +D AL RPGR+DR
Sbjct: 263 ARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNR-ADTLDPALLRPGRLDRKI 321
Query: 622 NLQKPTQSEREKILRIAAQETMDEELIDLVDW 653
P + ++ + ++ + + +DL D+
Sbjct: 322 EFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDY 353
Score = 49 (22.3 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 1 MYNSQENSVTKLSRSDIQEELESAQRKHLEQMILPSIVEVE 41
+Y ++ +L +DIQEE ++K+L++ +L + EV+
Sbjct: 30 LYGRLKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEEVK 70
Score = 38 (18.4 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 410 RKLRRVKAYFNYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDF 457
+ L R + + + +K ++K + A E +KR+++ P+ + F
Sbjct: 35 KSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQF 82
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 294 (108.6 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 67/206 (32%), Positives = 111/206 (53%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + D +E+++ E+ E V + +++P F++ G +GVL G G GKT LA
Sbjct: 472 VEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 531
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
AIA E + ++V+ EL +W G+S +NVRE+F AR AP ++F ++ D A RG
Sbjct: 532 KAIANECQANFISVKGPELLT-MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 590
Query: 566 QFIHTKQQDH-ESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
+ +NQLL E+DG + V ++ T ID AL RPGR+D++ +
Sbjct: 591 GGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIP 650
Query: 625 KPTQSEREKILRIAAQETMDEELIDL 650
P + R I + A +++ + +D+
Sbjct: 651 LPDEDSRLNIFKAALRKSPIAKDVDI 676
Score = 269 (99.8 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 70/227 (30%), Positives = 121/227 (53%)
Query: 435 DPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
+P+K E +R+ + + D V +I E+V L++P F+ +G + P+G+L+
Sbjct: 191 EPVKREDE--ERLDD--VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 246
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G G+GKT +A A+A E + E+ + L G+S SN+R+ F+ A AP IIF
Sbjct: 247 YGPPGSGKTLIARAVANETGAFFFCINGPEIMSKL-AGESESNLRKAFEEAEKNAPSIIF 305
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQR 613
+++ D A R + T + ++QLL +DG + + V++M T ID AL+R
Sbjct: 306 IDEIDSIAPKREK---TNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRR 362
Query: 614 PGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
GR DR ++ P + R ++LRI T + +L + VD ++++ T
Sbjct: 363 FGRFDREIDIGVPDEIGRLEVLRI---HTKNMKLAEDVDLERISKDT 406
Score = 40 (19.1 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 14/62 (22%), Positives = 26/62 (41%)
Query: 89 FVVRTPED-EVVKGFPEVELKWMFGDKEVVVPKAIGLHLYHGWKAWREEAKADLKRRLLE 147
F + PE + G E L+ F + E P I + RE+ +++RR++
Sbjct: 270 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVS 329
Query: 148 DV 149
+
Sbjct: 330 QL 331
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 277 (102.6 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 81/241 (33%), Positives = 126/241 (52%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPS 478
+Y + +I K +DP+ + M K P + ++ +EI EV+ +++P
Sbjct: 115 SYTLHKILPNK---VDPLVSL---MMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 168
Query: 479 AFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVR 538
F+ +G P+GVL+ G GTGKT LA A+A + V EL ++G+ A VR
Sbjct: 169 HFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL-VQKFIGEGARMVR 227
Query: 539 ELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VL 597
ELF AR+ AP IIF+++ D G R + + + + +LL +LDGFE + V+
Sbjct: 228 ELFVMAREHAPSIIFMDEIDSI-GSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 286
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVA 657
MAT R I +D AL RPGR+DR P + R IL+I +++ L ++ RK+A
Sbjct: 287 MATNR-IDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKM---NLTRGINLRKIA 342
Query: 658 E 658
E
Sbjct: 343 E 343
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 290 (107.1 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 77/243 (31%), Positives = 129/243 (53%)
Query: 433 GIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGV 491
G++ I+ + R + P + D +E+++ ++ + V + L++P +F MG + P+GV
Sbjct: 605 GMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGV 664
Query: 492 LIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVI 551
L+ G G KT +A A+A E+ + + ++ EL +VG+S VRE+F+ AR ++P I
Sbjct: 665 LLYGPPGCSKTMIAKALANESGLNFLAIKGPEL-MNKYVGESERAVREIFRKARAVSPSI 723
Query: 552 IFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEAL 611
IF ++ D A RG + + QLL E+DG E+ V ++A T +ID+AL
Sbjct: 724 IFFDELDALAIERGSSSGAGNVA-DRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKAL 782
Query: 612 QRPGRMDRIFNLQKPTQSEREKILRIA------AQETMDEELIDLVDWRKVAEKTALLRP 665
RPGR+DRI + P + R +IL + + + +ELI D AE A+ R
Sbjct: 783 MRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNDVNLDELIFQTDTYSGAEIIAVCRE 842
Query: 666 IEL 668
L
Sbjct: 843 AAL 845
Score = 206 (77.6 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 58/201 (28%), Positives = 99/201 (49%)
Query: 460 VESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVN 518
+ S + I E++ L+ P F+ G PRGVL+ G GTGKT +A A+A E V
Sbjct: 358 LSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSV 417
Query: 519 VEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESF 578
+ E+ + + G++ + +R++F A P IIF+++ D R + + +
Sbjct: 418 INGPEIISKFY-GETEARLRQIFAEATLRHPSIIFIDELDALCPKREG---AQNEVEKRV 473
Query: 579 INQLLVELDGF--EKQDGVVL-MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER---- 631
+ LL +DG E +G VL + T +D AL+RPGR D+ + P ++R
Sbjct: 474 VASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDIL 533
Query: 632 EKILRIAAQETMDEELIDLVD 652
+K+L+ + EL+ L +
Sbjct: 534 QKLLQRVPHLLTEVELLQLAN 554
Score = 45 (20.9 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 828 KLVFCFGSYAAAQLLLPFGEENLLSSSEIKQAQEIATR 865
+L+F +Y+ A+++ E LL+ E QA I R
Sbjct: 823 ELIFQTDTYSGAEIIAVCREAALLALEEDIQANSITRR 860
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 270 (100.1 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 78/243 (32%), Positives = 130/243 (53%)
Query: 457 FASVESMRE---EINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEA 512
FA V + E E+ EV+ L+NP F +G + P+GVL+ G GTGKT LA A+AA
Sbjct: 131 FAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASL 190
Query: 513 RVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQ 572
V + V + + ++G+SA +RE+F A++ P +IF+++ D G R +
Sbjct: 191 GVNFLKVVSSAI-VDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSAD 249
Query: 573 QDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSER 631
++ + + +LL ++DGF+ ++MAT R +D AL RPGR+DR + P + R
Sbjct: 250 REIQRTLMELLNQMDGFDYLGQTKIIMATNRP-DTLDPALLRPGRLDRKIEIPLPNEVGR 308
Query: 632 EKILRIAAQETMDEELIDLVDWRKVAEKT--ALLRPIELKLVPVALEGSAFRSKFLDTDE 689
+IL+I ++ + ID K+ + T A LR + + +A++ R + +D
Sbjct: 309 MEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKED--RDYVIQSD- 365
Query: 690 LMS 692
LMS
Sbjct: 366 LMS 368
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 293 (108.2 bits), Expect = 7.4e-21, Sum P(3) = 7.4e-21
Identities = 72/245 (29%), Positives = 125/245 (51%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + D ++ ++ + E++ + + +P F++ G RGVL G G GKT LA
Sbjct: 472 VEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLA 531
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A+E V+++ EL +W G+S +NVRE+F AR AP ++F ++ D RG
Sbjct: 532 KAVASECSANFVSIKGPELLT-MWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRG 590
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ + +NQLL E+DG + + + T + +DEAL RPGR+D++ +
Sbjct: 591 SSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL 650
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLVPVALEGSAFRSKFL 685
P R IL ++ E + +D+ +A+KTA +L + +A R +
Sbjct: 651 PDLGARISILTAILRKCPVAENVP-IDF--LAQKTAGFSGADLAELCQRAARAAIRDA-I 706
Query: 686 DTDEL 690
D +E+
Sbjct: 707 DAEEM 711
Score = 255 (94.8 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 66/204 (32%), Positives = 106/204 (51%)
Query: 435 DPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
DPIK E K I D + +I E++ L++P F+ +G + PRGVL+
Sbjct: 191 DPIKRDDEE----KLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLL 246
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G G+GKT +A A+A E + E+ + + G++ +N+R F+ A +P IIF
Sbjct: 247 YGPPGSGKTCIARAVANETGAFFFLINGPEVMSKM-AGEAEANLRRAFEEAEKNSPAIIF 305
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQR 613
+++ D A R + T + ++QLL +DG + + VV++A T ID AL+R
Sbjct: 306 IDEIDSIAPKREK---TNGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRR 362
Query: 614 PGRMDRIFNLQKPTQSEREKILRI 637
GR DR ++ P + R +ILRI
Sbjct: 363 FGRFDREIDIGVPDDNGRFEILRI 386
Score = 44 (20.5 bits), Expect = 7.4e-21, Sum P(3) = 7.4e-21
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 182 RWEMDPVAVPYAVSNK-IVESARIRHDWGAMYLSLKGDD--KEFYVDIKEFEVLFEDFGG 238
R +MD + + + +K ++ES + D M L +E V++ V ++D GG
Sbjct: 427 REKMDVIDLEDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPN--VKWDDIGG 484
Query: 239 FDEL 242
DE+
Sbjct: 485 LDEV 488
Score = 40 (19.1 bits), Expect = 7.4e-21, Sum P(3) = 7.4e-21
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 89 FVVRTPED-EVVKGFPEVELKWMFGDKEVVVPKAIGLHLYHGWKAWREEAKADLKRRLLE 147
F++ PE + G E L+ F + E P I + RE+ +++RR++
Sbjct: 270 FLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVS 329
Query: 148 DV 149
+
Sbjct: 330 QL 331
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 293 (108.2 bits), Expect = 7.4e-21, Sum P(3) = 7.4e-21
Identities = 72/245 (29%), Positives = 125/245 (51%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + D ++ ++ + E++ + + +P F++ G RGVL G G GKT LA
Sbjct: 472 VEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLA 531
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A+A+E V+++ EL +W G+S +NVRE+F AR AP ++F ++ D RG
Sbjct: 532 KAVASECSANFVSIKGPELLT-MWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRG 590
Query: 566 QFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQK 625
+ + +NQLL E+DG + + + T + +DEAL RPGR+D++ +
Sbjct: 591 SSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL 650
Query: 626 PTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLVPVALEGSAFRSKFL 685
P R IL ++ E + +D+ +A+KTA +L + +A R +
Sbjct: 651 PDLGARISILTAILRKCPVAENVP-IDF--LAQKTAGFSGADLAELCQRAARAAIRDA-I 706
Query: 686 DTDEL 690
D +E+
Sbjct: 707 DAEEM 711
Score = 255 (94.8 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 66/204 (32%), Positives = 106/204 (51%)
Query: 435 DPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLI 493
DPIK E K I D + +I E++ L++P F+ +G + PRGVL+
Sbjct: 191 DPIKRDDEE----KLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLL 246
Query: 494 VGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G G+GKT +A A+A E + E+ + + G++ +N+R F+ A +P IIF
Sbjct: 247 YGPPGSGKTCIARAVANETGAFFFLINGPEVMSKM-AGEAEANLRRAFEEAEKNSPAIIF 305
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQR 613
+++ D A R + T + ++QLL +DG + + VV++A T ID AL+R
Sbjct: 306 IDEIDSIAPKREK---TNGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRR 362
Query: 614 PGRMDRIFNLQKPTQSEREKILRI 637
GR DR ++ P + R +ILRI
Sbjct: 363 FGRFDREIDIGVPDDNGRFEILRI 386
Score = 44 (20.5 bits), Expect = 7.4e-21, Sum P(3) = 7.4e-21
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 182 RWEMDPVAVPYAVSNK-IVESARIRHDWGAMYLSLKGDD--KEFYVDIKEFEVLFEDFGG 238
R +MD + + + +K ++ES + D M L +E V++ V ++D GG
Sbjct: 427 REKMDVIDLEDEIIDKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPN--VKWDDIGG 484
Query: 239 FDEL 242
DE+
Sbjct: 485 LDEV 488
Score = 40 (19.1 bits), Expect = 7.4e-21, Sum P(3) = 7.4e-21
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 89 FVVRTPED-EVVKGFPEVELKWMFGDKEVVVPKAIGLHLYHGWKAWREEAKADLKRRLLE 147
F++ PE + G E L+ F + E P I + RE+ +++RR++
Sbjct: 270 FLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVS 329
Query: 148 DV 149
+
Sbjct: 330 QL 331
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 281 (104.0 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 85/288 (29%), Positives = 145/288 (50%)
Query: 374 IRTAVYGYVLFHILRFMKRKIPRLLGFGPMRRDPNFRKLRRVKAYFNYRVRRIKRKKKAG 433
I + +GYV + + + + + G + D N K F+ +V +K + A
Sbjct: 445 IASKTHGYVGADLTALCRESVMKTIQRG-LGTDANIDK-------FSLKVT-LKDVESAM 495
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVL 492
+D I+ + R ++ P + D E ++ ++ E++ L+ F +G AP+GVL
Sbjct: 496 VD-IRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVL 554
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G G KT A A+A E+ + + V+ E+ +VG+S +RE+F+ AR AP II
Sbjct: 555 LYGPPGCSKTLTAKALATESGINFLAVKGPEI-FNKYVGESERAIREIFRKARSAAPSII 613
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQ 612
F ++ D + R T +H + LL E+DG E+ GVV++A T +ID AL
Sbjct: 614 FFDEIDALSPDRDGS-STSAANH--VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALL 670
Query: 613 RPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
RPGR+DR + P + R +IL+ ++ EE VD ++A++T
Sbjct: 671 RPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEE--SGVDLHELADRT 716
Score = 227 (85.0 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 62/220 (28%), Positives = 106/220 (48%)
Query: 446 RVKNPPIPLKDFASVESMREEINEVVAFLQ----NPSAFQEMGARAPRGVLIVGERGTGK 501
R N P PL +A+V + +EI + + ++ P+ F G PRG+L+ G GTGK
Sbjct: 234 RKYNLPEPLS-YAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGK 292
Query: 502 TSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFA 561
T L +A + V+ + + ++G++ + +R++F AR P IIF+++ D A
Sbjct: 293 TMLLRVVANTSNAHVLTINGPSI-VSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIA 351
Query: 562 GVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIF 621
R + + LL +DG VV++A T +D AL+RPGR D+
Sbjct: 352 PNRAN--DDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEV 409
Query: 622 NLQKPTQSEREKIL-RIAAQETMDEELIDLVDWRKVAEKT 660
+ P R IL + ++ + D ++D + +A KT
Sbjct: 410 EIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKT 449
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 287 (106.1 bits), Expect = 8.5e-21, Sum P(2) = 8.5e-21
Identities = 73/225 (32%), Positives = 123/225 (54%)
Query: 447 VKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLA 505
V+ P + D ++ +++++ + V + +++ +AF +MG RG+L+ G G KT+LA
Sbjct: 278 VEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLA 337
Query: 506 LAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRG 565
A A A+ ++ EL + ++VG+ + +R FQ AR +P IIF ++ D+ A RG
Sbjct: 338 KAAANAAQASFFSLSCAELFS-MYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRG 396
Query: 566 QFIHTKQQD-HESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQ 624
+ E ++ LL E+DG E+ G++++A T ID AL RPGR D + +
Sbjct: 397 DESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVP 456
Query: 625 KPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELK 669
P R +IL++ T + L D VD RK+AE+T L EL+
Sbjct: 457 PPDLEARFEILQV---HTRNMTLGDDVDLRKIAEETDLFTGAELE 498
Score = 196 (74.1 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 55/198 (27%), Positives = 97/198 (48%)
Query: 461 ESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNV 519
E + + E++ F + P + +G + PRG+L+ G GTGKTSL A+ E ++ +
Sbjct: 28 ERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVL 87
Query: 520 EAQELEAGLWVGQSASNVRELFQTARDLA----PVIIFVEDFDLFAGVRGQFIHTKQQDH 575
+ G+S +RE F A A P +IF+++ D+ R ++QD
Sbjct: 88 SPHSVHRA-HAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDA---RREQDV 143
Query: 576 ESFINQLLVELDGFEKQDG---VVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSERE 632
+QL +D + VV++A+T + ID AL+R GR D + + P + +R
Sbjct: 144 R-IASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRL 202
Query: 633 KILRIAAQETMDEELIDL 650
KIL++ ++ + +DL
Sbjct: 203 KILQLYTKKVNLDPSVDL 220
Score = 39 (18.8 bits), Expect = 8.5e-21, Sum P(2) = 8.5e-21
Identities = 19/54 (35%), Positives = 24/54 (44%)
Query: 350 WQSEVEMSFNSRKTDDLNWSIWFLIRTAVYGYVLFHILRFMKRKIPR-LLGFGP 402
W++E E+ N R L I F R Y L R + K PR LL +GP
Sbjct: 18 WRAEAEIGGNERALQALRELIIFPFR-----YPLE--ARTLGLKWPRGLLLYGP 64
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 272 (100.8 bits), Expect = 8.7e-21, P = 8.7e-21
Identities = 63/218 (28%), Positives = 116/218 (53%)
Query: 439 NAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGER 497
++ + ++ + P I D ++ ++E+ E V L + +Q++G PRGVL+ G
Sbjct: 145 SSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPP 204
Query: 498 GTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDF 557
G GKT LA A+AA + V E ++G+ VR++F+ A++ +P IIF+++
Sbjct: 205 GCGKTMLAKAVAANTAASFIRVVGSEF-VQKYLGEGPRMVRDVFRLAKENSPSIIFIDEI 263
Query: 558 DLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEALQRPGR 616
D A R ++ + + +LL ++DGF++ V V+MAT R +D AL RPGR
Sbjct: 264 DAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQ-DTLDPALLRPGR 322
Query: 617 MDRIFNLQKPTQSEREKILR-IAAQETMDEELIDLVDW 653
+DR P + ++ + + ++ + ++ +DL DW
Sbjct: 323 LDRKIEFPLPDRRQKRLVFSTVCSRMNLSDD-VDLEDW 359
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 281 (104.0 bits), Expect = 9.9e-21, P = 9.9e-21
Identities = 67/209 (32%), Positives = 113/209 (54%)
Query: 450 PPIPLKDFASVESMREE-INEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAI 508
P + D ++E +R+E I ++A ++NP F+ +G P G+L+ G G GKT LA A+
Sbjct: 575 PNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAV 634
Query: 509 AAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFI 568
A E+ + ++V+ EL ++VG+S VR++FQ A++ AP +IF ++ D R
Sbjct: 635 ANESGLNFISVKGPEL-LNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSD-- 691
Query: 569 HTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+ +NQLL E+DG E + V ++A T ID A+ RPGR+D+ + P
Sbjct: 692 -RETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPP 750
Query: 629 SEREKILRIAAQETMDEELIDLVDWRKVA 657
++R IL+ + L + V+ +A
Sbjct: 751 ADRVAILKTITKNGTKPPLDEDVNLETIA 779
Score = 248 (92.4 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 63/202 (31%), Positives = 106/202 (52%)
Query: 438 KNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGER 497
K A R ++ + +D ++ +E+ +++ +++P +Q +G PRGVL+ G
Sbjct: 247 KKAKARSTELQISNVKFEDVGGNDATLKEVCKMLIHMRHPEVYQHLGVVPPRGVLLHGPP 306
Query: 498 GTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDF 557
G GKT LA AIA E +P++ V A E+ +G+ G+S +RELF A AP I+F+++
Sbjct: 307 GCGKTLLAHAIAGELDLPILKVAAPEIVSGV-SGESEQKLRELFDQAVSNAPCIVFIDEI 365
Query: 558 DLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDG---VVLMATTRNIKQIDEALQRP 614
D R + +K + + QLL +D V+++ T +D AL+R
Sbjct: 366 DAITPKRE--VASKDMERR-IVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRA 422
Query: 615 GRMDRIFNLQKPTQSEREKILR 636
GR DR L P ++ RE+IL+
Sbjct: 423 GRFDREVCLGIPDEAARERILQ 444
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 266 (98.7 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 63/180 (35%), Positives = 100/180 (55%)
Query: 461 ESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNV 519
E +RE + EV+ L NP FQ +G P+G L+ G GTGKT LA A+A++ + V
Sbjct: 132 EQIRE-LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 190
Query: 520 EAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFI 579
+ + ++G+SA +RE+F ARD P IIF+++ D G R + ++ + +
Sbjct: 191 VSSSI-VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 249
Query: 580 NQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAA 639
+LL ++DGF+ V ++ T +D AL RPGR+DR ++ P + R IL+I A
Sbjct: 250 MELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHA 309
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 271 (100.5 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 74/260 (28%), Positives = 134/260 (51%)
Query: 434 IDPIKNAFE-RMKRVKNPPIPLKDFASVESMREEINEVVAFLQNP----SAFQEMGARAP 488
ID + ++ R+K ++ P +D++ + + ++I ++V + P F+++G + P
Sbjct: 161 IDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPP 220
Query: 489 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLA 548
+GVL+ G GTGKT LA A A++ + + +L +++G A VR+ F A++ A
Sbjct: 221 KGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQL-VQMFIGDGAKMVRDAFNLAKEKA 279
Query: 549 PVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQID 608
P IIF+++ D R + ++ + + +LL +LDGF D V ++A T +D
Sbjct: 280 PAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLD 339
Query: 609 EALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIEL 668
AL R GR+DR L P + R +IL+I +++ + D V++ ++A T +L
Sbjct: 340 PALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHK--D-VNFEELARSTDDFNGAQL 396
Query: 669 KLVPVALEGSAFRSKFLDTD 688
K V V A R + D
Sbjct: 397 KAVCVEAGMIALRRGATEID 416
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 271 (100.5 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 74/260 (28%), Positives = 134/260 (51%)
Query: 434 IDPIKNAFE-RMKRVKNPPIPLKDFASVESMREEINEVVAFLQNP----SAFQEMGARAP 488
ID + ++ R+K ++ P +D++ + + ++I ++V + P F+++G + P
Sbjct: 161 IDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPP 220
Query: 489 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLA 548
+GVL+ G GTGKT LA A A++ + + +L +++G A VR+ F A++ A
Sbjct: 221 KGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQL-VQMFIGDGAKMVRDAFNLAKEKA 279
Query: 549 PVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQID 608
P IIF+++ D R + ++ + + +LL +LDGF D V ++A T +D
Sbjct: 280 PAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLD 339
Query: 609 EALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIEL 668
AL R GR+DR L P + R +IL+I +++ + D V++ ++A T +L
Sbjct: 340 PALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHK--D-VNFEELARSTDDFNGAQL 396
Query: 669 KLVPVALEGSAFRSKFLDTD 688
K V V A R + D
Sbjct: 397 KAVCVEAGMIALRRGATEID 416
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 281 (104.0 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 75/223 (33%), Positives = 108/223 (48%)
Query: 450 PPIPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIA 509
P L D +E + + EVV++L+ P G + P G L G GTGKT LA A+A
Sbjct: 846 PDNSLDDVIGLERAKRRLIEVVSWLKAPEKLLNFGIKIPTGFLFSGPPGTGKTLLAKAVA 905
Query: 510 AEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIH 569
E +P +V A EL G + N+++LF TAR AP IIF+++ D A R
Sbjct: 906 GECELPFFSVAASELSTP-HSGGTTENIKQLFATARKYAPSIIFIDEIDAIAAQRTDNSD 964
Query: 570 TKQQDHESFINQLLVELDGFEKQD-GVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+D +N LL E+DGF + V +MA T + + +D A+ RPGR D P +
Sbjct: 965 GSSRDKNLTVNALLTEMDGFSIAEVPVFVMAATNHPQLLDSAITRPGRFDETIYCDLPNK 1024
Query: 629 SEREKIL-RIAA------QETMDEELIDLVDWRKVAEKTALLR 664
+ R R A+ QET ++L+ AE +LR
Sbjct: 1025 NARLIFFKRFASKHKLNWQETELQQLVSSAQGMSSAEIDQVLR 1067
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 266 (98.7 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 63/180 (35%), Positives = 100/180 (55%)
Query: 461 ESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNV 519
E +RE + EV+ L NP FQ +G P+G L+ G GTGKT LA A+A++ + V
Sbjct: 140 EQIRE-LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Query: 520 EAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFI 579
+ + ++G+SA +RE+F ARD P IIF+++ D G R + ++ + +
Sbjct: 199 VSSSI-VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 580 NQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAA 639
+LL ++DGF+ V ++ T +D AL RPGR+DR ++ P + R IL+I A
Sbjct: 258 MELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHA 317
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 266 (98.7 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 63/180 (35%), Positives = 100/180 (55%)
Query: 461 ESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNV 519
E +RE + EV+ L NP FQ +G P+G L+ G GTGKT LA A+A++ + V
Sbjct: 140 EQIRE-LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Query: 520 EAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFI 579
+ + ++G+SA +RE+F ARD P IIF+++ D G R + ++ + +
Sbjct: 199 VSSSI-VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 580 NQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAA 639
+LL ++DGF+ V ++ T +D AL RPGR+DR ++ P + R IL+I A
Sbjct: 258 MELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHA 317
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 266 (98.7 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 63/180 (35%), Positives = 100/180 (55%)
Query: 461 ESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNV 519
E +RE + EV+ L NP FQ +G P+G L+ G GTGKT LA A+A++ + V
Sbjct: 140 EQIRE-LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Query: 520 EAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFI 579
+ + ++G+SA +RE+F ARD P IIF+++ D G R + ++ + +
Sbjct: 199 VSSSI-VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 580 NQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAA 639
+LL ++DGF+ V ++ T +D AL RPGR+DR ++ P + R IL+I A
Sbjct: 258 MELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHA 317
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 266 (98.7 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 63/180 (35%), Positives = 100/180 (55%)
Query: 461 ESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNV 519
E +RE + EV+ L NP FQ +G P+G L+ G GTGKT LA A+A++ + V
Sbjct: 140 EQIRE-LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Query: 520 EAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFI 579
+ + ++G+SA +RE+F ARD P IIF+++ D G R + ++ + +
Sbjct: 199 VSSSI-VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 580 NQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAA 639
+LL ++DGF+ V ++ T +D AL RPGR+DR ++ P + R IL+I A
Sbjct: 258 MELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHA 317
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 266 (98.7 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 63/180 (35%), Positives = 100/180 (55%)
Query: 461 ESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNV 519
E +RE + EV+ L NP FQ +G P+G L+ G GTGKT LA A+A++ + V
Sbjct: 140 EQIRE-LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Query: 520 EAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFI 579
+ + ++G+SA +RE+F ARD P IIF+++ D G R + ++ + +
Sbjct: 199 VSSSI-VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 580 NQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAA 639
+LL ++DGF+ V ++ T +D AL RPGR+DR ++ P + R IL+I A
Sbjct: 258 MELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHA 317
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 266 (98.7 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 63/180 (35%), Positives = 100/180 (55%)
Query: 461 ESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNV 519
E +RE + EV+ L NP FQ +G P+G L+ G GTGKT LA A+A++ + V
Sbjct: 140 EQIRE-LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Query: 520 EAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFI 579
+ + ++G+SA +RE+F ARD P IIF+++ D G R + ++ + +
Sbjct: 199 VSSSI-VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 580 NQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAA 639
+LL ++DGF+ V ++ T +D AL RPGR+DR ++ P + R IL+I A
Sbjct: 258 MELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHA 317
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 252 (93.8 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 70/209 (33%), Positives = 101/209 (48%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVL 492
IDP M+ + P + D + E++ EVV L +P F +G P+GVL
Sbjct: 20 IDP---TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVL 76
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G GTGKT A A+A + V EL +VG+ A VRELF+ AR +I
Sbjct: 77 LFGPPGTGKTLCARAVANRTDACFIRVIGSEL-VQKYVGEGARMVRELFEMARTKKACLI 135
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEAL 611
F ++ D G R + + + +L+ +LDGF+ + + VLMAT R +D AL
Sbjct: 136 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRP-DTLDPAL 194
Query: 612 QRPGRMDRIFNLQKPTQSEREKILRIAAQ 640
RPGR+DR P R I +I A+
Sbjct: 195 MRPGRLDRKIEFSLPDLEGRTHIFKIHAR 223
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 276 (102.2 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 79/274 (28%), Positives = 133/274 (48%)
Query: 458 ASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPV 516
A ++ + E + E+V + P F+++G P GVL+VG G GKT L A+A EA +
Sbjct: 200 AGLDDVGESLKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREAGAYL 259
Query: 517 VNVEAQELEAGLWVGQSASNVRELFQTARDLA---PVIIFVEDFDLFAGVRGQFIHTKQQ 573
+ + L G G+S N+R +F+ R+++ P ++F+++ D RG +
Sbjct: 260 LCISGPALY-GSRPGESEENLRSVFEKGREMSCEGPTVLFIDEIDALCPKRGS---SNSA 315
Query: 574 DHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREK 633
+ + QLL LDG ++D +V++A T +D AL+RPGR DR + PT ++R
Sbjct: 316 PEDRLVAQLLTLLDGVGRKDRMVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRS 375
Query: 634 ILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELK-LVPVALEGSAFRSKFLDTDELMS 692
IL++ IDLV K+AE T +L L A + F S + L++
Sbjct: 376 ILQMLTCSMPISTDIDLV---KLAEMTTGYVGADLTALCREAAMQAVFHSSLDSAEVLIN 432
Query: 693 YCGWFATFSGVVPKWFRKTKIVKKISRMLVDHLG 726
+ F + P FR +K+ + + +G
Sbjct: 433 MADFQEAFKKIQPSSFRSAIGLKECKPITWEQIG 466
Score = 171 (65.3 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 45/141 (31%), Positives = 73/141 (51%)
Query: 451 PIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIA 509
PI + +E ++ ++ + V + ++ P AF MG P+GVL+ G G KT+L A+A
Sbjct: 459 PITWEQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPKGVLLYGPSGCAKTTLVKAVA 518
Query: 510 AEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIH 569
++V EL + +VG S + ++F+ AR P IIF+++ D G R H
Sbjct: 519 TSCHCSFLSVSGAELFSP-YVGDSEKILSQVFRQARANTPAIIFLDEIDSILGSRS---H 574
Query: 570 TKQQD--HESFINQLLVELDG 588
+K E ++ LL ELDG
Sbjct: 575 SKSGHGVSERVLSVLLNELDG 595
Score = 98 (39.6 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 29/92 (31%), Positives = 50/92 (54%)
Query: 580 NQLLVELDGFE--KQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI 637
N+L +EL+ E +D +V+ AT R +D+AL RPGR+DR+ + P R IL+I
Sbjct: 606 NKLQLELEFQETLSRDFMVVAATNRP-DMLDDALLRPGRLDRVIYIPPPDLKGRLSILKI 664
Query: 638 AAQETMDEELIDLVDWRKVAEKTALLRPIELK 669
++ + + L D +A +T L +++
Sbjct: 665 CTEKIPLDTDVSLQD---IAARTDLFSGADIE 693
>WB|WBGene00004191 [details] [associations]
symbol:prx-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0006625 "protein targeting
to peroxisome" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0005778 HSSP:Q01853 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 GeneTree:ENSGT00550000075032
EMBL:Z70205 UniGene:Cel.18145 GeneID:181538 KEGG:cel:CELE_C11H1.4
CTD:181538 NextBio:914356 EMBL:AB054992 PIR:T19207 PIR:T19208
RefSeq:NP_510386.2 ProteinModelPortal:G5ED99 SMR:G5ED99
EnsemblMetazoa:C11H1.4a WormBase:C11H1.4a OMA:PYPEHGI
Uniprot:G5ED99
Length = 996
Score = 278 (102.9 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 74/233 (31%), Positives = 123/233 (52%)
Query: 437 IKNAFE-----RMKRVKNPPI-P-LKDFASVESMREEINEVVAFLQN-PSAFQEMGARAP 488
++ AFE +M ++++ + P ++D + ++ + +V+ + + P F+ +G
Sbjct: 703 VEKAFECFVAGKMGKIEDGQVLPTMEDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVS 762
Query: 489 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLA 548
+G+L+ G G GKT LA A + + VVNV+ EL ++G S NVR +F+ AR A
Sbjct: 763 KGILLHGPSGCGKTLLANATISNSNFSVVNVKGPEL-LSKYIGASEENVRLVFEKARSCA 821
Query: 549 PVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEK-QDGVVLMATTRNIKQI 607
P I+F ++ D A RG H + +NQLL ELDG E GV+++ T I I
Sbjct: 822 PCILFFDELDSLAPKRG---HDSTGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRIDLI 878
Query: 608 DEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKT 660
D+AL RPGR D P ++ER I+++ + + VD+ +A+KT
Sbjct: 879 DDALLRPGRFDHHVYCGHPEKTERLDIMKVLTNKLKPTD----VDFECLAQKT 927
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 266 (98.7 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 63/180 (35%), Positives = 100/180 (55%)
Query: 461 ESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNV 519
E +RE + EV+ L NP FQ +G P+G L+ G GTGKT LA A+A++ + V
Sbjct: 146 EQIRE-LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 204
Query: 520 EAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFI 579
+ + ++G+SA +RE+F ARD P IIF+++ D G R + ++ + +
Sbjct: 205 VSSSI-VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 263
Query: 580 NQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAA 639
+LL ++DGF+ V ++ T +D AL RPGR+DR ++ P + R IL+I A
Sbjct: 264 MELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHA 323
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 268 (99.4 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 80/227 (35%), Positives = 111/227 (48%)
Query: 423 VRRIKRKKKAGIDP-IKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAF 480
V R K K + + P I + M + P I D + E++ EVV L P F
Sbjct: 129 VDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERF 188
Query: 481 QEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVREL 540
+G P+GVL+ G GTGKT A AIA + V EL +VG+ A VREL
Sbjct: 189 VTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSEL-VQKYVGEGARMVREL 247
Query: 541 FQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHE--SFINQLLVELDGFEKQDGV-VL 597
FQ A+ I+F+++ D G RG + DHE + +++ +LDGF+ + + VL
Sbjct: 248 FQMAKSKKACILFIDEVDAIGGSRGD--ESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVL 305
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMD 644
MAT R +D AL RPGR+DR P R I +I A TM+
Sbjct: 306 MATNRP-DTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHAN-TMN 350
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 268 (99.4 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 80/227 (35%), Positives = 111/227 (48%)
Query: 423 VRRIKRKKKAGIDP-IKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAF 480
V R K K + + P I + M + P I D + E++ EVV L P F
Sbjct: 129 VDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERF 188
Query: 481 QEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVREL 540
+G P+GVL+ G GTGKT A AIA + V EL +VG+ A VREL
Sbjct: 189 VTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSEL-VQKYVGEGARMVREL 247
Query: 541 FQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHE--SFINQLLVELDGFEKQDGV-VL 597
FQ A+ I+F+++ D G RG + DHE + +++ +LDGF+ + + VL
Sbjct: 248 FQMAKSKKACILFIDEVDAIGGSRGD--ESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVL 305
Query: 598 MATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMD 644
MAT R +D AL RPGR+DR P R I +I A TM+
Sbjct: 306 MATNRP-DTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHAN-TMN 350
>SGD|S000001680 [details] [associations]
symbol:PEX1 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042623
"ATPase activity, coupled" evidence=IEA] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IMP;IPI] [GO:0005777
"peroxisome" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IMP] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IGI;IDA;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
SGD:S000001680 GO:GO:0005524 EMBL:BK006944 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12
GeneTree:ENSGT00550000075032 OrthoDB:EOG4TQQJ3 EMBL:M58676
EMBL:Z28197 PIR:S38034 RefSeq:NP_012724.1 ProteinModelPortal:P24004
SMR:P24004 DIP:DIP-4266N IntAct:P24004 MINT:MINT-483826
STRING:P24004 PaxDb:P24004 EnsemblFungi:YKL197C GeneID:853636
KEGG:sce:YKL197C CYGD:YKL197c HOGENOM:HOG000163138 OMA:SAVAQQC
NextBio:974520 Genevestigator:P24004 GermOnline:YKL197C
Uniprot:P24004
Length = 1043
Score = 278 (102.9 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 80/253 (31%), Positives = 128/253 (50%)
Query: 420 NYRVRRIKRKKKAGIDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSA 479
N R + K + P +A +K K I D ++ + ++ + E L+ P+
Sbjct: 664 NVVTRELFSKSLSAFTP--SALRGVKLTKETNIKWGDIGALANAKDVLLET---LEWPTK 718
Query: 480 FQEMGARAP----RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAS 535
++ + P G+L+ G G GKT LA A+A + + ++V+ E+ ++G S
Sbjct: 719 YEPIFVNCPLRLRSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEI-LNKFIGASEQ 777
Query: 536 NVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV 595
N+RELF+ A+ + P I+F ++FD A RG H + +NQLL ++DG E DGV
Sbjct: 778 NIRELFERAQSVKPCILFFDEFDSIAPKRG---HDSTGVTDRVVNQLLTQMDGAEGLDGV 834
Query: 596 VLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEE-------LI 648
++A T ID AL RPGR+D+ PT+SER IL+ A + D++ L
Sbjct: 835 YILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQ-AIVNSKDKDTGQKKFALE 893
Query: 649 DLVDWRKVAEKTA 661
D + +AEKTA
Sbjct: 894 KNADLKLIAEKTA 906
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 266 (98.7 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 63/180 (35%), Positives = 100/180 (55%)
Query: 461 ESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNV 519
E +RE + EV+ L NP FQ +G P+G L+ G GTGKT LA A+A++ + V
Sbjct: 154 EQIRE-LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 212
Query: 520 EAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFI 579
+ + ++G+SA +RE+F ARD P IIF+++ D G R + ++ + +
Sbjct: 213 VSSSI-VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 271
Query: 580 NQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAA 639
+LL ++DGF+ V ++ T +D AL RPGR+DR ++ P + R IL+I A
Sbjct: 272 MELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHA 331
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 266 (98.7 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 63/180 (35%), Positives = 100/180 (55%)
Query: 461 ESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNV 519
E +RE + EV+ L NP FQ +G P+G L+ G GTGKT LA A+A++ + V
Sbjct: 154 EQIRE-LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 212
Query: 520 EAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFI 579
+ + ++G+SA +RE+F ARD P IIF+++ D G R + ++ + +
Sbjct: 213 VSSSI-VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 271
Query: 580 NQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAA 639
+LL ++DGF+ V ++ T +D AL RPGR+DR ++ P + R IL+I A
Sbjct: 272 MELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHA 331
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 266 (98.7 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 63/180 (35%), Positives = 100/180 (55%)
Query: 461 ESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNV 519
E +RE + EV+ L NP FQ +G P+G L+ G GTGKT LA A+A++ + V
Sbjct: 154 EQIRE-LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 212
Query: 520 EAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFI 579
+ + ++G+SA +RE+F ARD P IIF+++ D G R + ++ + +
Sbjct: 213 VSSSI-VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 271
Query: 580 NQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAA 639
+LL ++DGF+ V ++ T +D AL RPGR+DR ++ P + R IL+I A
Sbjct: 272 MELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHA 331
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 265 (98.3 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 67/205 (32%), Positives = 109/205 (53%)
Query: 456 DFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARV 514
+ + + E+ EVV L P F +G +AP+GVL+ G GTGKT LA AIA+
Sbjct: 138 EIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEA 197
Query: 515 PVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQD 574
+ V + + ++G+SA +RE+F ARD P +IF+++ D G R + ++
Sbjct: 198 NFLKVVSSAI-VDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSADRE 256
Query: 575 HESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREK 633
+ + +LL ++DGF+ V ++MAT R +D AL RPGR+DR + P ++ R
Sbjct: 257 IQRTLMELLNQMDGFDTLSKVKIIMATNRP-DVLDPALLRPGRLDRKIEIPLPNEAGRVD 315
Query: 634 ILRIAAQETMDEELIDLVDWRKVAE 658
+L+I A +D K+A+
Sbjct: 316 VLKIHAANITKHGDVDYEAIAKLAD 340
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 266 (98.7 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 62/178 (34%), Positives = 100/178 (56%)
Query: 461 ESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNV 519
E +RE + EV+ L NP FQ +G P+G L+ G GTGKT LA A+A++ + V
Sbjct: 140 EQIRE-LREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKV 198
Query: 520 EAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFI 579
+ + ++G+SA +RE+F ARD P IIF+++ D G R + ++ + +
Sbjct: 199 VSSSI-VDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL 257
Query: 580 NQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRI 637
+LL ++DGF+ V ++ T +D AL RPGR+DR +++ P + R IL+I
Sbjct: 258 MELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKI 315
Score = 37 (18.1 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 644 DEELIDLVDWRKVAEKTALLRPIELKL 670
D E + D+ K K A + +E KL
Sbjct: 358 DHEYVTQEDFMKAVRKVADSKKLESKL 384
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 286 (105.7 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 68/204 (33%), Positives = 113/204 (55%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEIN-EVVAFLQNPSAFQEMGARAPRGVL 492
+ ++ + +R V P + D ++E +REE+ ++A ++NP F+ +G P GVL
Sbjct: 443 LSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVL 502
Query: 493 IVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVII 552
+ G G GKT LA A+A E+ + ++V+ EL ++VG+S VR++FQ A++ AP +I
Sbjct: 503 LAGPPGCGKTLLAKAVANESGLNFISVKGPEL-LNMYVGESERAVRQVFQRAKNSAPCVI 561
Query: 553 FVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQ 612
F ++ D R + +NQLL E+DG E + V +MA T ID A+
Sbjct: 562 FFDEVDALCPRRSD---RETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAIL 618
Query: 613 RPGRMDRIFNLQKPTQSEREKILR 636
RPGR+D+ + P ++R IL+
Sbjct: 619 RPGRLDKTLFVGLPPPADRLAILK 642
Score = 242 (90.2 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 60/188 (31%), Positives = 100/188 (53%)
Query: 452 IPLKDFASVESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAE 511
+ +D + +E+ +++ +++P + +G PRGVL+ G G GKT LA AIA E
Sbjct: 145 VKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGE 204
Query: 512 ARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTK 571
+P++ V A E+ +G+ G+S +RELF+ A AP IIF+++ D R + +K
Sbjct: 205 LDLPILKVAAPEIVSGV-SGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKRE--VASK 261
Query: 572 QQDHESFINQLLVELDGFEKQDG---VVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQ 628
+ + QLL +D V+++ T +D AL+R GR DR L P +
Sbjct: 262 DMERR-IVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 320
Query: 629 SEREKILR 636
+ RE+IL+
Sbjct: 321 ASRERILQ 328
Score = 37 (18.1 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 59 KQCLKDSRELQRNLEARIRKNMKKLGNEKRFVVRTPEDEVVKG 101
K+ +D +E+ +EA ++K K G E F + + E V G
Sbjct: 112 KRKKEDLQEVDGEIEAVLQKKAKARGLE--FQISNVKFEDVGG 152
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 276 (102.2 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 78/234 (33%), Positives = 123/234 (52%)
Query: 432 AGIDPIKNAF-ERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPR 489
A I+ +N F + + + P + +D ++ +++EI + + L++P F G +
Sbjct: 791 AAINEARNQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRS 849
Query: 490 GVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAP 549
G+L G GTGKT LA AIA + +V+ EL +++G+S +NVR +FQ ARD P
Sbjct: 850 GILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPEL-LNMYIGESEANVRRVFQRARDAKP 908
Query: 550 VIIFVEDFDLFAGVRG-QFIHTKQQDHESFINQLLVELDGFEKQ--DGVVLMATTRNIKQ 606
+IF ++ D A RG Q D ++QLL ELDG + DGV ++ T
Sbjct: 909 CVIFFDELDSVAPKRGNQGDSGGVMDR--IVSQLLAELDGMSSEGGDGVFVVGATNRPDL 966
Query: 607 IDEALQRPGRMDRIFNLQ-KPTQSEREKILRIAAQETMDEELIDLVDWRKVAEK 659
+DEAL RPGR D++ L T ++ KIL ++ +L D V+ +VA K
Sbjct: 967 LDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKF---KLDDNVNLEQVAAK 1017
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 276 (102.2 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 78/234 (33%), Positives = 123/234 (52%)
Query: 432 AGIDPIKNAF-ERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPR 489
A I+ +N F + + + P + +D ++ +++EI + + L++P F G +
Sbjct: 791 AAINEARNQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRS 849
Query: 490 GVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAP 549
G+L G GTGKT LA AIA + +V+ EL +++G+S +NVR +FQ ARD P
Sbjct: 850 GILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPEL-LNMYIGESEANVRRVFQRARDAKP 908
Query: 550 VIIFVEDFDLFAGVRG-QFIHTKQQDHESFINQLLVELDGFEKQ--DGVVLMATTRNIKQ 606
+IF ++ D A RG Q D ++QLL ELDG + DGV ++ T
Sbjct: 909 CVIFFDELDSVAPKRGNQGDSGGVMDR--IVSQLLAELDGMSSEGGDGVFVVGATNRPDL 966
Query: 607 IDEALQRPGRMDRIFNLQ-KPTQSEREKILRIAAQETMDEELIDLVDWRKVAEK 659
+DEAL RPGR D++ L T ++ KIL ++ +L D V+ +VA K
Sbjct: 967 LDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKF---KLDDNVNLEQVAAK 1017
>ASPGD|ASPL0000002697 [details] [associations]
symbol:pexA species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005778
EMBL:BN001301 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 HOGENOM:HOG000163138
EnsemblFungi:CADANIAT00007027 OMA:APIFAQC Uniprot:C8V3A3
Length = 1225
Score = 276 (102.2 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 70/220 (31%), Positives = 118/220 (53%)
Query: 457 FASVESMREEINEVVAFLQNPSAFQEMGARAP----RGVLIVGERGTGKTSLALAIAAEA 512
F+++ + E ++ LQ P+ + + A+ P G+L+ G G GKT LA A+A E
Sbjct: 849 FSAIGGLHETRKMLLETLQYPTKYAPIFAQCPLRLRSGLLLYGYPGCGKTMLASAVAGEC 908
Query: 513 RVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQ 572
+ ++V+ E+ ++G S +VR+LF+ A+ P I+F ++FD A RG H
Sbjct: 909 GLNFISVKGPEI-LNKYIGASEKSVRDLFERAQAARPCILFFDEFDSIAPKRG---HDST 964
Query: 573 QDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSERE 632
+ +NQLL ++DG E GV ++A T ID AL RPGR+D+ P ++R
Sbjct: 965 GVTDRVVNQLLTQMDGAEGLSGVYVLAATSRPDLIDPALLRPGRLDKSLLCDMPNHADRA 1024
Query: 633 KILRIAAQE-TMDEELIDLVDWRKVAEKTALLRPIELKLV 671
I+R +++ M E++ +D +VA +TA +L+ V
Sbjct: 1025 DIIRAVSKKLAMSNEVVARID--EVAARTAGFSGADLQAV 1062
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 263 (97.6 bits), Expect = 6.3e-20, Sum P(2) = 6.3e-20
Identities = 65/194 (33%), Positives = 103/194 (53%)
Query: 466 EINEVVAF-LQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQEL 524
E+ E + L NP F +G + P+GVL+ G GTGKT LA AIA+ + + + +
Sbjct: 151 ELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAI 210
Query: 525 EAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHESFINQLLV 584
++G+SA +RE+F ARD P IIF+++ D G R + ++ + + +LL
Sbjct: 211 -IDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLN 269
Query: 585 ELDGFEKQDGVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKILRIAAQETMD 644
+LDGF++ V ++ T +D AL RPGR+DR + P + R ++L+I A
Sbjct: 270 QLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQARMEVLKIHAAGIAK 329
Query: 645 EELIDLVDWRKVAE 658
ID K+AE
Sbjct: 330 HGEIDYEAVVKLAE 343
Score = 42 (19.8 bits), Expect = 6.3e-20, Sum P(2) = 6.3e-20
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 70 RNLEARIRKNMKKLGNEKRFVVRTPED 96
R LE+R+ + L N K+ +T +D
Sbjct: 27 RELESRVSTVRENLKNAKKDFTKTEDD 53
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 265 (98.3 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 61/200 (30%), Positives = 107/200 (53%)
Query: 439 NAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGER 497
++ + ++ + P + D ++ ++E+ E V L P ++++G P G+LI G
Sbjct: 122 SSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPP 181
Query: 498 GTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDF 557
GTGKT L A+A E +V + V E ++G+ VR++F+ AR+ +P IIF+++
Sbjct: 182 GTGKTMLVKAVANETQVTFIGVVGSEF-VQKYLGEGPRMVRDVFRLARENSPSIIFIDEV 240
Query: 558 DLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEALQRPGR 616
D A R ++ + + +LL ++DGF+K V V+MAT R +D AL RPGR
Sbjct: 241 DAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNR-ADTLDPALLRPGR 299
Query: 617 MDRIFNLQKPTQSEREKILR 636
+DR P + ++ I +
Sbjct: 300 LDRKIEFPLPDRKQKRLIFQ 319
Score = 37 (18.1 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 2 YNSQENSVTKLSRSDIQEELESAQRKHLEQMILPSIVEVEDLG--PLFYQDSLD 53
Y +N ++ +IQE+ + K+L++ ++ S E++ + PL LD
Sbjct: 14 YIRLKNLKKQIDILNIQEDYIKEEHKNLKRELIRSKNEIKRIQSVPLIIGQFLD 67
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 265 (98.3 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 61/200 (30%), Positives = 107/200 (53%)
Query: 439 NAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARAPRGVLIVGER 497
++ + ++ + P + D ++ ++E+ E V L P ++++G P G+LI G
Sbjct: 122 SSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPP 181
Query: 498 GTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDF 557
GTGKT L A+A E +V + V E ++G+ VR++F+ AR+ +P IIF+++
Sbjct: 182 GTGKTMLVKAVANETQVTFIGVVGSEF-VQKYLGEGPRMVRDVFRLARENSPSIIFIDEV 240
Query: 558 DLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGV-VLMATTRNIKQIDEALQRPGR 616
D A R ++ + + +LL ++DGF+K V V+MAT R +D AL RPGR
Sbjct: 241 DAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNR-ADTLDPALLRPGR 299
Query: 617 MDRIFNLQKPTQSEREKILR 636
+DR P + ++ I +
Sbjct: 300 LDRKIEFPLPDRKQKRLIFQ 319
Score = 37 (18.1 bits), Expect = 7.2e-20, Sum P(2) = 7.2e-20
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 2 YNSQENSVTKLSRSDIQEELESAQRKHLEQMILPSIVEVEDLG--PLFYQDSLD 53
Y +N ++ +IQE+ + K+L++ ++ S E++ + PL LD
Sbjct: 14 YIRLKNLKKQIDILNIQEDYIKEEHKNLKRELIRSKNEIKRIQSVPLIIGQFLD 67
>TIGR_CMR|CHY_2164 [details] [associations]
symbol:CHY_2164 "ATPase, AAA family" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0019538 "protein metabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0464 GO:GO:0017111 RefSeq:YP_360978.1
ProteinModelPortal:Q3AA56 STRING:Q3AA56 GeneID:3726841
KEGG:chy:CHY_2164 PATRIC:21277395
BioCyc:CHYD246194:GJCN-2163-MONOMER Uniprot:Q3AA56
Length = 411
Score = 264 (98.0 bits), Expect = 7.3e-20, P = 7.3e-20
Identities = 72/239 (30%), Positives = 118/239 (49%)
Query: 439 NAFERMKRVKNPPIPLKDFASVESMREEINEVVAFLQNPSA---FQEMGARAPRGVLIVG 495
N +E +K LK +E E I + + + +P F+ MG P+ +++ G
Sbjct: 141 NEYELYHYLKGDKNILKSLYGLEEAVESIEKSLKIVLDPETSKKFRAMGLSVPKNIILYG 200
Query: 496 ERGTGKTSLALAIAAEARVP--VVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIF 553
G GKT+ A +A +P VVN A + +G VG + + ELF A+ L P IIF
Sbjct: 201 PPGNGKTNFARTVAQAYGLPFFVVNASAI-ISSGQLVGAAEKTLLELFANAKALRPAIIF 259
Query: 554 VEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQR 613
++ D A R T + IN LL ++DGFEK D V+L+A T I +DEA+ R
Sbjct: 260 FDEIDAIAKKRRA--ETLNSASDILINILLTQMDGFEKVDDVLLIAATNRIDILDEAILR 317
Query: 614 PGRMDRIFNLQKPTQSEREKILRIAAQETMDEEL-IDLVDWRKVAEKTALLRPIELKLV 671
PGR D+ + P + R+K + + +++ + +L+++ +A T E+K +
Sbjct: 318 PGRFDQKILIPNPDKEARKKYFDLFLGQKIEKGIDAELLEY--LANSTEGFSVAEIKTI 374
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 280 (103.6 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 76/266 (28%), Positives = 132/266 (49%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARA-PRGV 491
+ I+ A +R P + D ++ +R+++ + + ++ F +G P+G+
Sbjct: 512 LSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGI 571
Query: 492 LIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVI 551
L+ G G GKT LA A+A E + ++V+ EL ++VG+S VR +FQ ARD P +
Sbjct: 572 LLCGPPGCGKTLLAKAVANETGMNFISVKGPEL-LNMYVGESERAVRTVFQRARDSQPCV 630
Query: 552 IFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEAL 611
IF ++ D R H + +NQLL E+DG E + V L+ T +D A+
Sbjct: 631 IFFDEIDALVPKRS---HGESSGGARLVNQLLTEMDGVEGRQKVFLIGATNRPDIVDAAI 687
Query: 612 QRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLV 671
RPGR+D+I + P+ +R ILR + + L + +D+ ++A+ L L
Sbjct: 688 LRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLA 747
Query: 672 PVALEGS--AFRSKFLDTDELMSYCG 695
+ E S A +++ L+ DE + G
Sbjct: 748 ALIHESSLLALQARVLENDESVKGVG 773
Score = 176 (67.0 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 41/123 (33%), Positives = 66/123 (53%)
Query: 466 EINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELE 525
E+ + L+ P F +G PRG ++ G G GKT A A+A E +P++ + A EL
Sbjct: 217 EVCRLAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELV 276
Query: 526 AGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHES-FINQLLV 584
+G+ G++ +R LF TA+ +P I+ ++D D A R T Q++ E ++QL
Sbjct: 277 SGV-SGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRR----ETAQREMERRVVSQLCS 331
Query: 585 ELD 587
LD
Sbjct: 332 SLD 334
Score = 74 (31.1 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 594 GVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKIL 635
GV+++ TT +D L+R GR + +L P ++ REKIL
Sbjct: 370 GVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKIL 411
Score = 43 (20.2 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 227 KEFEVLFEDFGGFDELYMKMLACGIPTAVHVMR 259
+E V FE GG D ++++ C + A+H+ R
Sbjct: 199 RESHVKFEHIGGADRQFLEV--CRL--AMHLKR 227
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 280 (103.6 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 76/266 (28%), Positives = 132/266 (49%)
Query: 434 IDPIKNAFERMKRVKNPPIPLKDFASVESMREEINEVVAF-LQNPSAFQEMGARA-PRGV 491
+ I+ A +R P + D ++ +R+++ + + ++ F +G P+G+
Sbjct: 512 LSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGI 571
Query: 492 LIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVI 551
L+ G G GKT LA A+A E + ++V+ EL ++VG+S VR +FQ ARD P +
Sbjct: 572 LLCGPPGCGKTLLAKAVANETGMNFISVKGPEL-LNMYVGESERAVRTVFQRARDSQPCV 630
Query: 552 IFVEDFDLFAGVRGQFIHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNIKQIDEAL 611
IF ++ D R H + +NQLL E+DG E + V L+ T +D A+
Sbjct: 631 IFFDEIDALVPKRS---HGESSGGARLVNQLLTEMDGVEGRQKVFLIGATNRPDIVDAAI 687
Query: 612 QRPGRMDRIFNLQKPTQSEREKILRIAAQETMDEELIDLVDWRKVAEKTALLRPIELKLV 671
RPGR+D+I + P+ +R ILR + + L + +D+ ++A+ L L
Sbjct: 688 LRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLA 747
Query: 672 PVALEGS--AFRSKFLDTDELMSYCG 695
+ E S A +++ L+ DE + G
Sbjct: 748 ALIHESSLLALQARVLENDESVKGVG 773
Score = 176 (67.0 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 41/123 (33%), Positives = 66/123 (53%)
Query: 466 EINEVVAFLQNPSAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELE 525
E+ + L+ P F +G PRG ++ G G GKT A A+A E +P++ + A EL
Sbjct: 217 EVCRLAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELV 276
Query: 526 AGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGQFIHTKQQDHES-FINQLLV 584
+G+ G++ +R LF TA+ +P I+ ++D D A R T Q++ E ++QL
Sbjct: 277 SGV-SGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRR----ETAQREMERRVVSQLCS 331
Query: 585 ELD 587
LD
Sbjct: 332 SLD 334
Score = 74 (31.1 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 594 GVVLMATTRNIKQIDEALQRPGRMDRIFNLQKPTQSEREKIL 635
GV+++ TT +D L+R GR + +L P ++ REKIL
Sbjct: 370 GVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKIL 411
Score = 43 (20.2 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 227 KEFEVLFEDFGGFDELYMKMLACGIPTAVHVMR 259
+E V FE GG D ++++ C + A+H+ R
Sbjct: 199 RESHVKFEHIGGADRQFLEV--CRL--AMHLKR 227
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 265 (98.3 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 64/205 (31%), Positives = 113/205 (55%)
Query: 443 RMKRVKNPPIPLKDFASV----ESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERG 498
R+K ++ P + ++ + + ++E I VV + + F +G P+GVL+ G G
Sbjct: 162 RVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPG 221
Query: 499 TGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFD 558
TGKT +A A+AA+ + + + +L +++G A VR+ F A++ AP IIF+++ D
Sbjct: 222 TGKTMMARAVAAQTKSTFLKLAGPQL-VQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 280
Query: 559 LFAGVRGQFIHTKQQDHE--SFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGR 616
G + +F K D E + +LL +LDGF+ D + ++A T I +D AL R GR
Sbjct: 281 AI-GTK-RFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGR 338
Query: 617 MDRIFNLQKPTQSEREKILRIAAQE 641
+DR L P + R +I++I +++
Sbjct: 339 LDRKIELPHPNEDARARIMQIHSRK 363
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 265 (98.3 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 64/205 (31%), Positives = 113/205 (55%)
Query: 443 RMKRVKNPPIPLKDFASV----ESMREEINEVVAFLQNPSAFQEMGARAPRGVLIVGERG 498
R+K ++ P + ++ + + ++E I VV + + F +G P+GVL+ G G
Sbjct: 162 RVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPG 221
Query: 499 TGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFD 558
TGKT +A A+AA+ + + + +L +++G A VR+ F A++ AP IIF+++ D
Sbjct: 222 TGKTMMARAVAAQTKSTFLKLAGPQL-VQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 280
Query: 559 LFAGVRGQFIHTKQQDHE--SFINQLLVELDGFEKQDGVVLMATTRNIKQIDEALQRPGR 616
G + +F K D E + +LL +LDGF+ D + ++A T I +D AL R GR
Sbjct: 281 AI-GTK-RFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGR 338
Query: 617 MDRIFNLQKPTQSEREKILRIAAQE 641
+DR L P + R +I++I +++
Sbjct: 339 LDRKIELPHPNEDARARIMQIHSRK 363
WARNING: HSPs involving 413 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 979 948 0.00094 122 3 11 22 0.37 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 663
No. of states in DFA: 632 (67 KB)
Total size of DFA: 463 KB (2217 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 81.99u 0.17s 82.16t Elapsed: 00:00:04
Total cpu time: 82.05u 0.17s 82.22t Elapsed: 00:00:04
Start: Mon May 20 19:29:44 2013 End: Mon May 20 19:29:48 2013
WARNINGS ISSUED: 2