Query 035566
Match_columns 238
No_of_seqs 157 out of 1246
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 04:06:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035566.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035566hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3109 Haloacid dehalogenase- 100.0 1.6E-33 3.4E-38 200.8 17.0 217 3-219 14-235 (244)
2 TIGR01993 Pyr-5-nucltdase pyri 100.0 9.1E-29 2E-33 182.1 18.4 183 5-188 1-184 (184)
3 COG0546 Gph Predicted phosphat 100.0 8.6E-29 1.9E-33 186.8 14.7 200 1-212 1-218 (220)
4 PRK13288 pyrophosphatase PpaX; 100.0 2.6E-28 5.7E-33 183.9 14.9 197 3-213 2-212 (214)
5 PRK13478 phosphonoacetaldehyde 100.0 1.1E-27 2.3E-32 186.2 16.3 206 1-221 1-264 (267)
6 PLN02770 haloacid dehalogenase 100.0 6E-28 1.3E-32 185.4 13.3 192 2-207 20-231 (248)
7 PRK10563 6-phosphogluconate ph 100.0 1.9E-27 4.1E-32 180.1 13.9 197 1-210 1-211 (221)
8 PRK13226 phosphoglycolate phos 100.0 1.5E-27 3.2E-32 181.3 12.7 195 3-211 11-224 (229)
9 PLN03243 haloacid dehalogenase 99.9 7.2E-27 1.6E-31 179.6 14.8 200 3-216 23-239 (260)
10 TIGR03351 PhnX-like phosphonat 99.9 2.1E-26 4.5E-31 174.3 16.3 195 4-211 1-219 (220)
11 PRK14988 GMP/IMP nucleotidase; 99.9 5.3E-26 1.1E-30 171.9 17.6 201 3-214 9-221 (224)
12 TIGR01422 phosphonatase phosph 99.9 1.6E-26 3.5E-31 178.4 14.9 122 86-211 96-252 (253)
13 PRK11587 putative phosphatase; 99.9 1.7E-26 3.6E-31 174.4 14.4 190 3-208 2-204 (218)
14 PLN02575 haloacid dehalogenase 99.9 2.5E-26 5.4E-31 182.6 15.4 204 3-219 130-349 (381)
15 TIGR02253 CTE7 HAD superfamily 99.9 3.7E-26 8E-31 173.1 15.1 197 4-207 2-220 (221)
16 PRK10826 2-deoxyglucose-6-phos 99.9 2E-26 4.4E-31 174.6 13.3 193 3-209 6-217 (222)
17 PRK13225 phosphoglycolate phos 99.9 8.4E-26 1.8E-30 174.8 16.2 197 3-216 61-272 (273)
18 TIGR01449 PGP_bact 2-phosphogl 99.9 6.7E-26 1.5E-30 170.8 14.2 190 7-210 1-212 (213)
19 TIGR01454 AHBA_synth_RP 3-amin 99.9 8.9E-26 1.9E-30 169.0 14.2 190 7-211 1-203 (205)
20 PRK13223 phosphoglycolate phos 99.9 8.1E-26 1.8E-30 175.5 14.1 198 3-215 12-233 (272)
21 PRK13222 phosphoglycolate phos 99.9 2.5E-25 5.4E-30 169.2 14.7 198 2-213 4-223 (226)
22 COG0637 Predicted phosphatase/ 99.9 1.5E-25 3.3E-30 168.7 13.0 195 3-211 1-216 (221)
23 TIGR02254 YjjG/YfnB HAD superf 99.9 8.1E-25 1.8E-29 166.2 16.6 198 4-211 1-224 (224)
24 PRK09449 dUMP phosphatase; Pro 99.9 9.4E-25 2E-29 165.7 16.7 121 87-211 93-222 (224)
25 COG1011 Predicted hydrolase (H 99.9 3.3E-25 7.1E-30 168.8 12.5 123 87-213 97-228 (229)
26 PRK10725 fructose-1-P/6-phosph 99.9 5.7E-25 1.2E-29 162.5 11.6 173 2-189 3-186 (188)
27 PLN02940 riboflavin kinase 99.9 7.7E-25 1.7E-29 177.2 12.6 191 3-209 10-218 (382)
28 PRK10748 flavin mononucleotide 99.9 7.1E-24 1.5E-28 162.0 15.1 116 87-211 111-238 (238)
29 PRK06698 bifunctional 5'-methy 99.9 1.2E-23 2.6E-28 174.9 14.2 201 3-214 240-456 (459)
30 PLN02779 haloacid dehalogenase 99.9 1.4E-23 3E-28 164.0 12.5 118 87-209 142-270 (286)
31 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 2.9E-23 6.3E-28 153.0 12.5 169 4-188 1-185 (185)
32 TIGR01428 HAD_type_II 2-haloal 99.9 3.9E-23 8.3E-28 153.9 13.0 102 87-192 90-195 (198)
33 TIGR02252 DREG-2 REG-2-like, H 99.9 2.5E-22 5.4E-27 150.2 13.9 96 87-187 103-203 (203)
34 TIGR01990 bPGM beta-phosphoglu 99.9 6.5E-23 1.4E-27 151.2 9.8 168 6-189 1-185 (185)
35 PF13419 HAD_2: Haloacid dehal 99.9 1.3E-23 2.8E-28 153.4 5.8 172 7-188 1-176 (176)
36 PLN02919 haloacid dehalogenase 99.9 4.3E-22 9.2E-27 178.6 13.9 192 3-208 74-286 (1057)
37 PHA02597 30.2 hypothetical pro 99.9 7.4E-22 1.6E-26 146.9 12.0 180 4-209 2-196 (197)
38 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 2E-22 4.2E-27 148.3 7.9 96 88-188 84-183 (183)
39 TIGR00338 serB phosphoserine p 99.9 3.4E-21 7.3E-26 145.8 13.3 121 88-210 84-218 (219)
40 TIGR02247 HAD-1A3-hyp Epoxide 99.9 1.6E-21 3.5E-26 146.6 10.6 101 87-191 92-198 (211)
41 PRK09456 ?-D-glucose-1-phospha 99.8 4.2E-20 9.1E-25 137.6 13.5 101 88-192 83-188 (199)
42 TIGR01548 HAD-SF-IA-hyp1 haloa 99.8 9.4E-20 2E-24 135.5 12.8 88 89-181 106-197 (197)
43 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 1.7E-19 3.7E-24 129.0 11.4 150 6-182 1-154 (154)
44 PRK06769 hypothetical protein; 99.8 8.2E-20 1.8E-24 132.5 9.8 120 88-211 27-171 (173)
45 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 4.1E-20 8.9E-25 135.0 8.0 87 87-181 88-175 (175)
46 PLN02811 hydrolase 99.8 9.5E-20 2.1E-24 137.7 9.2 118 87-208 76-207 (220)
47 PRK08942 D,D-heptose 1,7-bisph 99.8 6.5E-19 1.4E-23 129.2 12.8 119 88-212 28-177 (181)
48 PRK13582 thrH phosphoserine ph 99.8 4.5E-19 9.8E-24 132.8 12.1 190 4-217 1-201 (205)
49 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 8.7E-19 1.9E-23 130.8 13.5 105 88-192 79-193 (201)
50 PLN02954 phosphoserine phospha 99.8 8.1E-18 1.8E-22 127.7 16.6 192 2-211 10-223 (224)
51 TIGR00213 GmhB_yaeD D,D-heptos 99.8 1.3E-18 2.8E-23 126.9 11.3 116 88-209 25-176 (176)
52 KOG2914 Predicted haloacid-hal 99.8 1.7E-18 3.6E-23 128.2 11.0 191 3-207 9-218 (222)
53 PRK09552 mtnX 2-hydroxy-3-keto 99.8 2.5E-18 5.4E-23 129.9 11.1 128 87-216 72-217 (219)
54 KOG3085 Predicted hydrolase (H 99.8 6E-18 1.3E-22 125.7 12.3 101 87-192 111-216 (237)
55 PRK11133 serB phosphoserine ph 99.8 9.1E-18 2E-22 132.5 12.3 121 87-211 179-315 (322)
56 TIGR01691 enolase-ppase 2,3-di 99.8 4E-17 8.7E-22 122.1 14.9 180 4-193 1-200 (220)
57 TIGR01656 Histidinol-ppas hist 99.7 5.1E-18 1.1E-22 120.1 7.8 99 89-191 27-147 (147)
58 TIGR01685 MDP-1 magnesium-depe 99.7 2.1E-18 4.6E-23 123.8 5.7 103 86-192 42-160 (174)
59 TIGR01672 AphA HAD superfamily 99.7 2.3E-17 5E-22 124.3 11.5 97 87-193 112-215 (237)
60 TIGR02137 HSK-PSP phosphoserin 99.7 8.3E-17 1.8E-21 119.4 12.4 189 5-214 2-198 (203)
61 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 1.2E-16 2.6E-21 111.2 11.0 94 89-190 25-132 (132)
62 COG0560 SerB Phosphoserine pho 99.7 1.1E-16 2.3E-21 119.4 9.1 187 2-204 3-202 (212)
63 TIGR01261 hisB_Nterm histidino 99.7 8.5E-17 1.8E-21 114.9 7.9 99 88-192 28-150 (161)
64 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.7 9E-17 2E-21 123.9 8.1 120 91-211 122-254 (257)
65 TIGR01670 YrbI-phosphatas 3-de 99.7 4.5E-16 9.8E-21 110.8 8.9 111 95-218 37-152 (154)
66 PRK01158 phosphoglycolate phos 99.7 2.6E-16 5.5E-21 120.0 7.7 106 107-214 120-228 (230)
67 TIGR02726 phenyl_P_delta pheny 99.7 4.4E-16 9.6E-21 111.6 8.0 112 96-219 44-159 (169)
68 cd01427 HAD_like Haloacid deha 99.6 8.4E-16 1.8E-20 107.4 8.5 103 86-188 21-139 (139)
69 TIGR01489 DKMTPPase-SF 2,3-dik 99.6 6.4E-15 1.4E-19 108.7 13.4 94 88-184 71-184 (188)
70 TIGR01452 PGP_euk phosphoglyco 99.6 5.5E-16 1.2E-20 121.2 7.7 114 90-207 144-279 (279)
71 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 2.5E-15 5.4E-20 108.1 9.4 92 90-187 43-160 (166)
72 PRK10530 pyridoxal phosphate ( 99.6 1.9E-15 4E-20 118.1 9.5 72 143-215 196-271 (272)
73 TIGR03333 salvage_mtnX 2-hydro 99.6 5.2E-15 1.1E-19 111.4 10.3 126 88-215 69-212 (214)
74 PLN02645 phosphoglycolate phos 99.6 1.4E-15 3.1E-20 120.5 7.0 108 103-211 187-307 (311)
75 PRK11009 aphA acid phosphatase 99.6 1.8E-14 3.9E-19 108.6 10.7 109 72-193 98-215 (237)
76 PRK05446 imidazole glycerol-ph 99.6 4E-14 8.6E-19 112.6 12.3 109 88-211 29-161 (354)
77 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.6 4.3E-14 9.2E-19 105.6 11.2 100 88-187 86-196 (202)
78 TIGR01488 HAD-SF-IB Haloacid D 99.5 7.2E-14 1.6E-18 102.2 11.2 94 88-181 72-177 (177)
79 PRK09484 3-deoxy-D-manno-octul 99.5 8.7E-15 1.9E-19 107.2 6.2 101 98-211 60-168 (183)
80 TIGR01482 SPP-subfamily Sucros 99.5 6.5E-15 1.4E-19 111.8 5.4 97 107-206 112-210 (225)
81 PRK10513 sugar phosphate phosp 99.5 5.9E-14 1.3E-18 109.5 10.4 77 138-215 188-268 (270)
82 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.5 1.9E-14 4E-19 110.6 7.0 114 90-207 122-249 (249)
83 TIGR01668 YqeG_hyp_ppase HAD s 99.5 2.5E-13 5.5E-18 98.3 12.0 93 88-193 42-140 (170)
84 COG0561 Cof Predicted hydrolas 99.5 9.9E-14 2.1E-18 107.9 10.6 78 138-215 181-261 (264)
85 PLN02887 hydrolase family prot 99.5 2.1E-13 4.7E-18 115.1 13.0 76 138-214 499-578 (580)
86 PRK10976 putative hydrolase; P 99.5 1.3E-13 2.8E-18 107.4 10.7 78 138-215 182-264 (266)
87 PRK11590 hypothetical protein; 99.5 1.2E-12 2.5E-17 98.4 13.3 103 88-192 94-205 (211)
88 PRK10444 UMP phosphatase; Prov 99.5 1.7E-13 3.7E-18 104.9 8.3 62 146-207 174-245 (248)
89 PHA02530 pseT polynucleotide k 99.5 2.8E-13 6E-18 107.3 9.6 101 88-192 186-299 (300)
90 TIGR01487 SPP-like sucrose-pho 99.5 6.8E-14 1.5E-18 105.5 5.6 96 107-206 112-208 (215)
91 PRK15126 thiamin pyrimidine py 99.5 2.3E-13 5E-18 106.3 8.7 77 138-215 180-262 (272)
92 TIGR01681 HAD-SF-IIIC HAD-supe 99.5 2.6E-13 5.7E-18 93.5 7.3 85 89-180 29-126 (128)
93 COG0647 NagD Predicted sugar p 99.4 1E-12 2.2E-17 100.4 10.1 70 144-213 188-267 (269)
94 PF00702 Hydrolase: haloacid d 99.4 1.9E-13 4.1E-18 103.0 5.5 86 88-182 126-215 (215)
95 PRK00192 mannosyl-3-phosphogly 99.4 3.1E-12 6.7E-17 99.9 11.2 72 146-217 190-272 (273)
96 PRK03669 mannosyl-3-phosphogly 99.4 2.4E-12 5.1E-17 100.5 10.2 80 138-217 179-270 (271)
97 PRK08238 hypothetical protein; 99.4 4.3E-12 9.2E-17 105.4 11.0 97 86-192 69-168 (479)
98 PF13242 Hydrolase_like: HAD-h 99.4 2.7E-12 5.7E-17 79.9 6.4 62 146-207 4-75 (75)
99 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.3 4.3E-12 9.2E-17 97.3 8.5 96 91-190 140-242 (242)
100 COG2179 Predicted hydrolase of 99.3 9E-12 1.9E-16 86.4 9.0 87 92-190 49-139 (175)
101 PF06888 Put_Phosphatase: Puta 99.3 7E-11 1.5E-15 88.8 14.5 118 69-192 57-200 (234)
102 COG1778 Low specificity phosph 99.3 1.8E-12 3.8E-17 88.7 4.5 115 95-221 44-162 (170)
103 smart00577 CPDc catalytic doma 99.3 1.7E-12 3.6E-17 91.9 4.4 92 88-185 44-138 (148)
104 COG4229 Predicted enolase-phos 99.3 9.6E-11 2.1E-15 82.2 12.1 190 1-198 1-213 (229)
105 TIGR01545 YfhB_g-proteo haloac 99.3 2.7E-10 5.8E-15 85.2 15.0 103 88-192 93-204 (210)
106 TIGR01544 HAD-SF-IE haloacid d 99.3 2.5E-10 5.3E-15 87.7 14.7 110 68-181 104-230 (277)
107 TIGR01686 FkbH FkbH-like domai 99.3 1.5E-11 3.4E-16 98.0 7.4 86 90-183 32-124 (320)
108 TIGR00099 Cof-subfamily Cof su 99.3 1E-11 2.2E-16 96.2 6.1 69 138-206 180-249 (256)
109 TIGR02244 HAD-IG-Ncltidse HAD 99.2 2.3E-10 4.9E-15 90.7 13.1 103 88-190 183-324 (343)
110 COG0241 HisB Histidinol phosph 99.2 5E-10 1.1E-14 80.3 13.4 115 92-208 34-173 (181)
111 KOG1615 Phosphoserine phosphat 99.2 1.4E-10 3.1E-15 82.3 10.3 120 86-208 85-222 (227)
112 PF12689 Acid_PPase: Acid Phos 99.2 4.7E-11 1E-15 85.2 6.0 98 87-192 43-154 (169)
113 TIGR01456 CECR5 HAD-superfamil 99.2 8.8E-11 1.9E-15 93.6 8.1 67 145-211 232-320 (321)
114 TIGR02463 MPGP_rel mannosyl-3- 99.2 2.2E-10 4.8E-15 86.7 9.3 43 144-186 177-219 (221)
115 KOG2882 p-Nitrophenyl phosphat 99.1 4.1E-10 8.9E-15 85.7 9.5 121 91-212 167-304 (306)
116 TIGR01460 HAD-SF-IIA Haloacid 99.1 1.3E-10 2.8E-15 88.7 5.9 46 146-191 188-236 (236)
117 PF08282 Hydrolase_3: haloacid 99.1 1.4E-10 3.1E-15 89.3 5.6 65 141-206 181-247 (254)
118 KOG3040 Predicted sugar phosph 99.1 4.8E-10 1E-14 80.5 7.7 68 146-213 181-258 (262)
119 TIGR01663 PNK-3'Pase polynucle 99.1 7.1E-10 1.5E-14 92.8 9.6 88 90-183 198-305 (526)
120 TIGR01486 HAD-SF-IIB-MPGP mann 99.1 5E-09 1.1E-13 81.2 12.9 72 143-214 173-255 (256)
121 PF06941 NT5C: 5' nucleotidase 99.0 2.8E-10 6E-15 84.1 4.7 172 5-214 2-188 (191)
122 KOG3120 Predicted haloacid deh 99.0 1.3E-08 2.8E-13 74.0 12.6 143 69-217 70-249 (256)
123 TIGR02471 sucr_syn_bact_C sucr 99.0 3.1E-09 6.7E-14 81.3 9.1 72 141-213 154-233 (236)
124 TIGR01485 SPP_plant-cyano sucr 99.0 5.9E-09 1.3E-13 80.4 9.9 53 141-193 162-214 (249)
125 PRK10187 trehalose-6-phosphate 99.0 8.8E-09 1.9E-13 80.0 10.6 79 139-219 167-248 (266)
126 TIGR01533 lipo_e_P4 5'-nucleot 99.0 8.5E-09 1.8E-13 79.3 10.2 82 87-178 116-204 (266)
127 PF12710 HAD: haloacid dehalog 98.9 1.3E-09 2.7E-14 80.7 5.3 85 92-179 92-192 (192)
128 PTZ00445 p36-lilke protein; Pr 98.9 8.5E-09 1.8E-13 75.1 7.3 46 147-192 158-208 (219)
129 PRK14502 bifunctional mannosyl 98.8 7.6E-08 1.7E-12 82.1 13.1 44 144-187 611-656 (694)
130 COG4359 Uncharacterized conser 98.8 2.2E-07 4.7E-12 65.8 11.1 137 70-220 59-220 (220)
131 TIGR02461 osmo_MPG_phos mannos 98.7 2.4E-08 5.2E-13 75.6 6.5 43 144-186 179-223 (225)
132 TIGR01684 viral_ppase viral ph 98.7 1E-07 2.2E-12 73.3 9.4 52 92-143 149-203 (301)
133 TIGR01484 HAD-SF-IIB HAD-super 98.7 3.6E-08 7.9E-13 73.7 6.7 49 138-186 155-203 (204)
134 TIGR01512 ATPase-IB2_Cd heavy 98.7 3.8E-08 8.2E-13 84.0 7.2 109 88-211 361-478 (536)
135 PRK12702 mannosyl-3-phosphogly 98.7 6.8E-07 1.5E-11 69.0 13.3 40 148-187 210-251 (302)
136 TIGR01525 ATPase-IB_hvy heavy 98.7 4.5E-08 9.8E-13 83.9 7.4 109 88-211 383-499 (556)
137 PLN02382 probable sucrose-phos 98.6 1.2E-06 2.7E-11 72.1 13.8 56 138-193 167-225 (413)
138 TIGR02251 HIF-SF_euk Dullard-l 98.6 2.2E-08 4.9E-13 71.8 2.9 96 88-189 41-139 (162)
139 PRK14501 putative bifunctional 98.6 1.7E-07 3.6E-12 82.9 8.8 76 138-215 649-724 (726)
140 PF05761 5_nucleotid: 5' nucle 98.6 8.7E-07 1.9E-11 73.1 12.3 103 89-191 183-326 (448)
141 PTZ00174 phosphomannomutase; P 98.6 1.3E-07 2.8E-12 72.8 7.0 50 138-191 180-233 (247)
142 PF05116 S6PP: Sucrose-6F-phos 98.6 3.6E-07 7.8E-12 70.2 8.6 53 139-192 158-210 (247)
143 PF09419 PGP_phosphatase: Mito 98.6 1.3E-06 2.8E-11 62.4 10.3 78 104-191 79-166 (168)
144 TIGR01511 ATPase-IB1_Cu copper 98.6 4.1E-07 9E-12 78.0 9.2 108 88-211 404-518 (562)
145 PLN02423 phosphomannomutase 98.5 1.7E-06 3.6E-11 66.5 11.5 49 137-190 180-232 (245)
146 COG4087 Soluble P-type ATPase 98.5 8.7E-07 1.9E-11 59.2 8.2 114 87-213 28-148 (152)
147 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.5 8E-07 1.7E-11 68.2 8.3 89 87-183 22-116 (242)
148 PF08645 PNK3P: Polynucleotide 98.5 4.9E-07 1.1E-11 64.5 6.3 88 92-185 32-152 (159)
149 COG4996 Predicted phosphatase 98.5 7.2E-07 1.6E-11 59.5 6.3 85 88-179 40-133 (164)
150 TIGR00685 T6PP trehalose-phosp 98.5 1.1E-06 2.5E-11 67.5 8.5 69 146-214 167-242 (244)
151 PHA03398 viral phosphatase sup 98.4 2.1E-06 4.5E-11 66.3 9.0 46 92-137 151-199 (303)
152 TIGR01675 plant-AP plant acid 98.4 8.2E-06 1.8E-10 61.3 11.0 99 87-189 118-222 (229)
153 TIGR01522 ATPase-IIA2_Ca golgi 98.3 1.3E-06 2.9E-11 78.8 7.5 121 89-211 528-670 (884)
154 PRK10671 copA copper exporting 98.3 2.5E-06 5.5E-11 76.7 8.5 109 89-212 650-765 (834)
155 PLN02177 glycerol-3-phosphate 98.3 4.8E-05 1E-09 64.0 14.9 96 90-190 111-215 (497)
156 COG5663 Uncharacterized conser 98.3 4.6E-07 1E-11 63.1 2.4 111 92-217 75-192 (194)
157 PLN02205 alpha,alpha-trehalose 98.2 3.8E-06 8.3E-11 75.0 6.4 72 143-216 759-846 (854)
158 PF03767 Acid_phosphat_B: HAD 98.1 4.4E-06 9.5E-11 63.3 4.7 90 89-180 115-210 (229)
159 PLN03017 trehalose-phosphatase 98.1 0.00013 2.9E-09 58.6 12.2 71 146-216 283-360 (366)
160 TIGR01680 Veg_Stor_Prot vegeta 98.0 0.00012 2.5E-09 56.2 10.6 103 86-191 142-251 (275)
161 PRK11033 zntA zinc/cadmium/mer 98.0 1.5E-05 3.2E-10 70.7 6.6 106 89-211 568-680 (741)
162 TIGR01116 ATPase-IIA1_Ca sarco 98.0 3.7E-05 8E-10 69.9 8.8 121 89-211 537-682 (917)
163 COG4030 Uncharacterized protei 98.0 0.00017 3.7E-09 53.3 10.4 38 88-125 82-121 (315)
164 PF03031 NIF: NLI interacting 97.8 3.6E-06 7.9E-11 60.3 -0.6 88 88-181 35-125 (159)
165 COG3700 AphA Acid phosphatase 97.8 0.00011 2.5E-09 52.0 6.5 87 94-190 119-212 (237)
166 PF11019 DUF2608: Protein of u 97.8 0.0018 3.9E-08 49.9 13.6 48 146-193 162-213 (252)
167 PRK14010 potassium-transportin 97.7 0.0001 2.2E-09 64.3 7.1 108 89-211 441-555 (673)
168 TIGR01497 kdpB K+-transporting 97.7 0.00013 2.9E-09 63.5 7.1 108 89-211 446-560 (675)
169 COG2217 ZntA Cation transport 97.7 0.00023 4.9E-09 62.4 8.1 108 89-211 537-651 (713)
170 COG2503 Predicted secreted aci 97.6 0.00054 1.2E-08 51.2 8.7 96 70-178 107-209 (274)
171 KOG2469 IMP-GMP specific 5'-nu 97.6 0.00054 1.2E-08 55.0 9.1 99 94-192 206-336 (424)
172 PRK01122 potassium-transportin 97.6 0.00027 5.9E-09 61.7 7.2 108 89-211 445-559 (679)
173 PF13344 Hydrolase_6: Haloacid 97.5 0.0021 4.6E-08 42.1 9.4 79 91-183 16-100 (101)
174 TIGR02250 FCP1_euk FCP1-like p 97.4 0.00027 6E-09 50.3 4.8 82 87-176 56-141 (156)
175 PRK15122 magnesium-transportin 97.4 0.00051 1.1E-08 62.4 7.3 115 89-211 550-689 (903)
176 TIGR01524 ATPase-IIIB_Mg magne 97.4 0.00064 1.4E-08 61.6 7.8 115 89-211 515-654 (867)
177 PLN02580 trehalose-phosphatase 97.3 0.00093 2E-08 54.3 7.1 72 144-216 299-378 (384)
178 PRK10517 magnesium-transportin 97.3 0.00083 1.8E-08 61.1 7.5 115 89-211 550-689 (902)
179 PF05152 DUF705: Protein of un 97.2 0.0033 7.2E-08 48.3 8.9 46 92-137 145-193 (297)
180 TIGR01647 ATPase-IIIA_H plasma 97.2 0.0015 3.3E-08 58.4 7.8 114 89-211 442-586 (755)
181 KOG2630 Enolase-phosphatase E- 97.1 0.0021 4.5E-08 47.7 6.7 100 89-193 123-228 (254)
182 TIGR01517 ATPase-IIB_Ca plasma 97.0 0.0023 4.9E-08 58.8 7.6 117 89-211 579-721 (941)
183 TIGR01523 ATPase-IID_K-Na pota 97.0 0.0025 5.4E-08 59.0 7.7 119 89-211 646-798 (1053)
184 TIGR02245 HAD_IIID1 HAD-superf 97.0 0.005 1.1E-07 45.4 7.8 92 90-184 46-151 (195)
185 COG3882 FkbH Predicted enzyme 97.0 0.0025 5.5E-08 52.4 6.7 84 91-183 257-348 (574)
186 COG0474 MgtA Cation transport 96.9 0.0012 2.7E-08 60.1 4.8 110 88-200 546-678 (917)
187 PLN02645 phosphoglycolate phos 96.8 0.0078 1.7E-07 48.1 7.8 86 90-187 45-136 (311)
188 KOG0202 Ca2+ transporting ATPa 96.7 0.0029 6.3E-08 55.5 5.3 132 89-224 584-740 (972)
189 COG3769 Predicted hydrolase (H 96.7 0.013 2.8E-07 43.4 7.5 22 164-185 211-232 (274)
190 TIGR01106 ATPase-IIC_X-K sodiu 96.7 0.0082 1.8E-07 55.5 8.1 120 89-211 568-736 (997)
191 PLN02499 glycerol-3-phosphate 96.4 0.047 1E-06 45.8 10.3 33 93-126 100-133 (498)
192 smart00775 LNS2 LNS2 domain. T 96.1 0.0059 1.3E-07 43.6 3.1 20 166-185 123-142 (157)
193 KOG0207 Cation transport ATPas 96.0 0.039 8.5E-07 49.2 7.8 107 90-211 724-837 (951)
194 TIGR01689 EcbF-BcbF capsule bi 95.9 0.0043 9.2E-08 42.3 1.5 14 5-18 2-15 (126)
195 TIGR01658 EYA-cons_domain eyes 95.9 0.065 1.4E-06 40.5 7.7 81 105-192 178-260 (274)
196 TIGR01652 ATPase-Plipid phosph 95.8 0.018 4E-07 53.7 5.5 49 162-211 768-819 (1057)
197 COG1877 OtsB Trehalose-6-phosp 95.1 0.061 1.3E-06 41.7 5.6 69 148-218 184-255 (266)
198 PF08235 LNS2: LNS2 (Lipin/Ned 95.1 0.11 2.3E-06 36.9 6.2 19 166-184 123-141 (157)
199 TIGR01494 ATPase_P-type ATPase 95.0 0.11 2.3E-06 44.6 7.3 94 89-203 347-443 (499)
200 TIGR01657 P-ATPase-V P-type AT 94.7 0.27 5.9E-06 46.1 9.6 38 89-126 656-696 (1054)
201 KOG2470 Similar to IMP-GMP spe 94.6 0.043 9.4E-07 43.6 3.5 99 91-189 242-375 (510)
202 PLN02151 trehalose-phosphatase 94.4 0.16 3.4E-06 41.2 6.4 70 146-216 269-346 (354)
203 COG4502 5'(3')-deoxyribonucleo 94.4 0.049 1.1E-06 37.3 3.0 99 87-211 66-174 (180)
204 PLN03190 aminophospholipid tra 94.2 0.088 1.9E-06 49.6 5.2 48 163-211 872-922 (1178)
205 PF05822 UMPH-1: Pyrimidine 5' 93.7 0.58 1.3E-05 35.8 7.9 106 69-181 74-198 (246)
206 COG5610 Predicted hydrolase (H 93.2 0.33 7.2E-06 40.2 6.2 95 90-188 100-201 (635)
207 PF06189 5-nucleotidase: 5'-nu 93.2 0.53 1.1E-05 36.2 6.9 72 103-192 187-261 (264)
208 TIGR01452 PGP_euk phosphoglyco 92.0 0.92 2E-05 35.7 7.3 83 91-186 20-108 (279)
209 TIGR00685 T6PP trehalose-phosp 91.7 0.21 4.6E-06 38.4 3.5 16 3-18 2-17 (244)
210 COG0647 NagD Predicted sugar p 91.6 1.2 2.6E-05 34.8 7.4 51 86-136 21-78 (269)
211 COG2216 KdpB High-affinity K+ 90.3 0.65 1.4E-05 39.3 5.0 88 90-192 448-538 (681)
212 KOG3189 Phosphomannomutase [Li 90.2 0.34 7.3E-06 35.6 3.0 28 5-32 12-39 (252)
213 KOG0204 Calcium transporting A 89.1 1.1 2.4E-05 40.3 5.8 119 89-211 647-791 (1034)
214 TIGR01457 HAD-SF-IIA-hyp2 HAD- 88.4 7.9 0.00017 29.9 9.7 122 92-213 20-167 (249)
215 KOG0210 P-type ATPase [Inorgan 87.5 1.6 3.4E-05 38.5 5.6 60 149-211 770-832 (1051)
216 KOG3107 Predicted haloacid deh 87.3 4.1 8.8E-05 33.2 7.4 78 106-191 374-453 (468)
217 smart00775 LNS2 LNS2 domain. T 86.8 3.8 8.3E-05 29.1 6.6 13 6-18 1-13 (157)
218 PLN02151 trehalose-phosphatase 86.8 0.65 1.4E-05 37.7 2.9 28 5-32 99-131 (354)
219 COG5083 SMP2 Uncharacterized p 84.4 0.62 1.3E-05 38.5 1.7 16 3-18 374-389 (580)
220 PLN02580 trehalose-phosphatase 82.2 0.73 1.6E-05 37.9 1.4 15 4-18 119-133 (384)
221 smart00577 CPDc catalytic doma 81.7 1.1 2.5E-05 31.4 2.1 16 4-19 2-17 (148)
222 TIGR02468 sucrsPsyn_pln sucros 81.3 5.8 0.00013 37.2 6.7 65 114-180 924-992 (1050)
223 PRK10444 UMP phosphatase; Prov 80.1 11 0.00024 29.1 7.2 102 91-192 19-145 (248)
224 PF06014 DUF910: Bacterial pro 77.8 1.2 2.6E-05 26.0 1.0 28 148-179 4-31 (62)
225 PF02358 Trehalose_PPase: Treh 77.8 2.6 5.6E-05 32.2 3.1 59 146-204 165-234 (235)
226 COG0052 RpsB Ribosomal protein 77.7 5.2 0.00011 30.6 4.5 49 164-212 158-210 (252)
227 COG2099 CobK Precorrin-6x redu 77.5 26 0.00056 27.1 8.1 55 154-214 191-251 (257)
228 KOG0206 P-type ATPase [General 77.4 1.9 4.1E-05 40.6 2.5 49 161-210 793-844 (1151)
229 PF06437 ISN1: IMP-specific 5' 77.4 7.5 0.00016 31.8 5.5 46 146-193 349-403 (408)
230 COG0027 PurT Formate-dependent 76.9 8.4 0.00018 30.8 5.5 81 148-234 114-196 (394)
231 TIGR02251 HIF-SF_euk Dullard-l 76.5 1.6 3.6E-05 31.2 1.6 16 5-20 2-17 (162)
232 KOG1618 Predicted phosphatase 76.1 2.1 4.6E-05 34.0 2.1 61 161-221 296-382 (389)
233 KOG3128 Uncharacterized conser 75.9 18 0.00038 28.0 6.8 91 91-181 140-247 (298)
234 TIGR02250 FCP1_euk FCP1-like p 73.4 2.6 5.7E-05 30.0 2.0 18 3-20 5-22 (156)
235 PF02358 Trehalose_PPase: Treh 72.7 3.5 7.5E-05 31.5 2.6 13 8-20 1-13 (235)
236 TIGR00715 precor6x_red precorr 71.3 7.8 0.00017 30.1 4.2 57 154-214 192-254 (256)
237 KOG2134 Polynucleotide kinase 67.6 3.9 8.5E-05 33.4 1.9 17 4-20 75-91 (422)
238 PRK08057 cobalt-precorrin-6x r 67.4 12 0.00025 29.0 4.4 58 154-215 185-247 (248)
239 KOG2961 Predicted hydrolase (H 67.1 5.4 0.00012 28.1 2.3 33 160-192 137-170 (190)
240 KOG0323 TFIIF-interacting CTD 66.5 15 0.00032 32.5 5.3 84 88-180 200-288 (635)
241 PF02222 ATP-grasp: ATP-grasp 63.2 13 0.00029 26.9 3.8 77 156-236 2-80 (172)
242 PF01071 GARS_A: Phosphoribosy 62.8 31 0.00068 25.6 5.7 69 151-219 6-75 (194)
243 PLN03064 alpha,alpha-trehalose 62.7 4.6 0.0001 37.4 1.7 15 4-18 591-605 (934)
244 COG4850 Uncharacterized conser 62.7 29 0.00063 27.9 5.7 79 88-175 195-291 (373)
245 PLN03063 alpha,alpha-trehalose 62.1 4.7 0.0001 36.9 1.6 72 146-217 678-786 (797)
246 COG4483 Uncharacterized protei 60.9 8.5 0.00018 22.6 2.0 29 148-180 4-32 (68)
247 PF02571 CbiJ: Precorrin-6x re 59.6 16 0.00036 28.2 4.0 55 154-212 189-248 (249)
248 KOG2961 Predicted hydrolase (H 58.9 16 0.00035 25.8 3.4 30 3-32 42-72 (190)
249 TIGR01458 HAD-SF-IIA-hyp3 HAD- 58.7 7.8 0.00017 30.1 2.2 46 90-135 22-73 (257)
250 KOG0209 P-type ATPase [Inorgan 56.2 14 0.00031 33.7 3.5 35 155-192 802-836 (1160)
251 KOG4549 Magnesium-dependent ph 55.9 45 0.00097 22.9 5.0 86 89-174 44-134 (144)
252 PLN03063 alpha,alpha-trehalose 54.2 63 0.0014 29.9 7.3 15 4-18 507-521 (797)
253 KOG1618 Predicted phosphatase 54.0 20 0.00043 28.8 3.6 21 6-26 37-57 (389)
254 smart00266 CAD Domains present 53.9 9.9 0.00021 23.2 1.5 14 5-18 39-52 (74)
255 KOG1605 TFIIF-interacting CTD 53.8 8.3 0.00018 30.0 1.5 93 88-186 130-225 (262)
256 cd06539 CIDE_N_A CIDE_N domain 53.5 9.6 0.00021 23.5 1.5 14 5-18 41-54 (78)
257 cd06537 CIDE_N_B CIDE_N domain 52.9 9.8 0.00021 23.6 1.4 14 5-18 40-53 (81)
258 KOG3040 Predicted sugar phosph 52.6 46 0.001 25.1 5.1 37 90-126 24-66 (262)
259 KOG2882 p-Nitrophenyl phosphat 52.1 71 0.0015 25.5 6.3 39 88-126 37-81 (306)
260 cd00733 GlyRS_alpha_core Class 50.6 39 0.00084 26.1 4.5 45 142-186 81-129 (279)
261 PRK09348 glyQ glycyl-tRNA synt 50.1 39 0.00085 26.2 4.5 45 142-186 85-133 (283)
262 cd01615 CIDE_N CIDE_N domain, 49.8 13 0.00027 23.0 1.6 13 6-18 42-54 (78)
263 PF01990 ATP-synt_F: ATP synth 48.2 39 0.00085 21.5 3.9 24 165-189 1-24 (95)
264 PRK02228 V-type ATP synthase s 48.2 44 0.00094 21.7 4.1 24 164-188 2-25 (100)
265 TIGR00388 glyQ glycyl-tRNA syn 47.5 46 0.001 25.9 4.5 45 142-186 82-130 (293)
266 TIGR01460 HAD-SF-IIA Haloacid 47.2 1.3E+02 0.0027 23.0 7.3 46 90-135 15-67 (236)
267 cd06536 CIDE_N_ICAD CIDE_N dom 46.9 15 0.00032 22.8 1.6 14 5-18 43-56 (80)
268 COG0078 ArgF Ornithine carbamo 46.6 61 0.0013 25.9 5.2 39 151-190 141-185 (310)
269 PF06506 PrpR_N: Propionate ca 45.7 68 0.0015 23.2 5.2 48 155-212 121-168 (176)
270 PF10113 Fibrillarin_2: Fibril 45.1 51 0.0011 27.6 4.7 37 152-188 212-252 (505)
271 cd06538 CIDE_N_FSP27 CIDE_N do 44.5 17 0.00037 22.5 1.6 13 6-18 41-53 (79)
272 PF04358 DsrC: DsrC like prote 43.1 95 0.0021 20.6 5.0 48 5-57 7-58 (109)
273 TIGR00236 wecB UDP-N-acetylglu 42.2 91 0.002 25.4 6.1 84 105-191 32-119 (365)
274 PRK00192 mannosyl-3-phosphogly 41.2 36 0.00078 26.6 3.4 36 94-129 26-64 (273)
275 TIGR01012 Sa_S2_E_A ribosomal 41.1 59 0.0013 24.2 4.2 48 164-211 110-161 (196)
276 TIGR02329 propionate_PrpR prop 40.2 1.1E+02 0.0023 26.9 6.3 74 103-191 98-172 (526)
277 PRK04020 rps2P 30S ribosomal p 40.1 86 0.0019 23.5 5.0 46 161-207 114-163 (204)
278 PRK01395 V-type ATP synthase s 40.1 69 0.0015 21.0 4.1 29 163-192 4-32 (104)
279 COG0761 lytB 4-Hydroxy-3-methy 39.5 1.7E+02 0.0036 23.4 6.5 42 147-192 226-267 (294)
280 KOG2116 Protein involved in pl 39.1 17 0.00038 32.0 1.4 51 167-217 655-710 (738)
281 PF13535 ATP-grasp_4: ATP-gras 38.5 1.3E+02 0.0029 21.2 6.0 72 147-219 4-76 (184)
282 PF09269 DUF1967: Domain of un 36.1 33 0.00071 20.6 1.9 22 150-171 44-65 (69)
283 TIGR01369 CPSaseII_lrg carbamo 35.9 3.1E+02 0.0066 26.5 9.0 69 148-217 670-739 (1050)
284 PRK13790 phosphoribosylamine-- 35.8 1.4E+02 0.003 24.8 6.1 69 148-216 68-136 (379)
285 PRK06524 biotin carboxylase-li 34.9 3.1E+02 0.0067 23.9 8.1 120 89-216 91-215 (493)
286 COG0752 GlyQ Glycyl-tRNA synth 34.4 85 0.0018 24.2 4.1 45 142-186 86-134 (298)
287 cd05796 Ribosomal_P0_like Ribo 34.2 1.1E+02 0.0023 22.0 4.6 36 92-127 67-103 (163)
288 cd06831 PLPDE_III_ODC_like_AZI 34.1 1.4E+02 0.003 25.0 5.9 15 88-102 45-59 (394)
289 PF02017 CIDE-N: CIDE-N domain 34.0 23 0.0005 21.9 1.0 13 6-18 42-54 (78)
290 PTZ00254 40S ribosomal protein 33.4 1.2E+02 0.0026 23.5 5.0 48 161-209 118-169 (249)
291 KOG2832 TFIIF-interacting CTD 32.6 1.6E+02 0.0036 24.3 5.7 78 89-172 214-293 (393)
292 COG2089 SpsE Sialic acid synth 32.5 2.8E+02 0.006 22.7 8.1 126 92-221 137-273 (347)
293 PRK12815 carB carbamoyl phosph 32.3 3.7E+02 0.008 26.1 8.9 66 148-214 671-737 (1068)
294 PF06901 FrpC: RTX iron-regula 32.1 32 0.00069 25.3 1.6 13 5-17 59-71 (271)
295 PLN02588 glycerol-3-phosphate 31.8 30 0.00066 29.8 1.7 19 5-23 51-69 (525)
296 cd00886 MogA_MoaB MogA_MoaB fa 31.7 1.8E+02 0.004 20.4 6.0 61 147-207 21-86 (152)
297 KOG4388 Hormone-sensitive lipa 31.3 1.7E+02 0.0037 26.0 5.9 19 156-174 462-480 (880)
298 TIGR03595 Obg_CgtA_exten Obg f 30.9 54 0.0012 19.6 2.3 24 149-172 43-66 (69)
299 COG0019 LysA Diaminopimelate d 30.7 1.3E+02 0.0028 25.2 5.2 31 158-188 92-124 (394)
300 COG2920 DsrC Dissimilatory sul 30.6 1.6E+02 0.0035 19.3 4.8 51 5-60 9-63 (111)
301 COG4018 Uncharacterized protei 30.6 53 0.0012 26.6 2.7 34 148-181 205-241 (505)
302 PF08620 RPAP1_C: RPAP1-like, 30.5 22 0.00047 21.7 0.5 9 8-16 4-12 (73)
303 PRK15424 propionate catabolism 30.3 2E+02 0.0044 25.3 6.4 74 103-191 108-182 (538)
304 TIGR02461 osmo_MPG_phos mannos 29.3 76 0.0016 24.0 3.4 34 94-127 20-56 (225)
305 PRK05294 carB carbamoyl phosph 29.1 4.9E+02 0.011 25.2 9.2 70 148-217 670-739 (1066)
306 PRK13717 conjugal transfer pro 28.9 24 0.00052 24.0 0.5 15 3-17 44-58 (128)
307 KOG0203 Na+/K+ ATPase, alpha s 28.8 44 0.00096 30.8 2.2 37 165-201 708-746 (1019)
308 PF13382 Adenine_deam_C: Adeni 28.7 61 0.0013 23.5 2.6 36 157-192 60-99 (171)
309 TIGR01487 SPP-like sucrose-pho 28.7 81 0.0017 23.4 3.4 38 90-127 19-59 (215)
310 PRK10513 sugar phosphate phosp 28.2 1.3E+02 0.0029 23.1 4.7 36 92-127 23-61 (270)
311 PF04413 Glycos_transf_N: 3-De 28.1 2.4E+02 0.0053 20.6 6.1 43 148-192 84-128 (186)
312 PF02786 CPSase_L_D2: Carbamoy 27.7 96 0.0021 23.3 3.6 69 150-218 4-74 (211)
313 PRK10671 copA copper exporting 27.2 35 0.00076 31.6 1.4 21 2-22 515-535 (834)
314 PF14336 DUF4392: Domain of un 26.7 3.3E+02 0.0072 21.7 7.6 75 147-224 163-266 (291)
315 PRK02186 argininosuccinate lya 26.6 5.6E+02 0.012 24.3 9.3 115 93-217 60-177 (887)
316 PRK08304 stage V sporulation p 26.3 2.7E+02 0.0059 22.8 6.0 69 124-192 33-111 (337)
317 KOG0622 Ornithine decarboxylas 26.2 1.8E+02 0.0038 24.6 5.0 31 156-186 117-149 (448)
318 PRK03957 V-type ATP synthase s 26.0 1.5E+02 0.0032 19.2 3.8 22 164-186 2-23 (100)
319 PRK12311 rpsB 30S ribosomal pr 26.0 2.2E+02 0.0047 23.2 5.5 46 161-207 152-201 (326)
320 PF02091 tRNA-synt_2e: Glycyl- 25.9 52 0.0011 25.6 1.9 45 142-186 80-128 (284)
321 PRK01158 phosphoglycolate phos 25.5 1.1E+02 0.0023 22.9 3.7 37 92-128 23-62 (230)
322 CHL00067 rps2 ribosomal protei 25.0 1.9E+02 0.0042 22.1 4.9 51 161-212 161-215 (230)
323 PF04273 DUF442: Putative phos 24.4 84 0.0018 20.8 2.5 16 176-191 51-66 (110)
324 KOG0183 20S proteasome, regula 23.8 1.3E+02 0.0028 22.7 3.5 22 6-27 134-158 (249)
325 TIGR02463 MPGP_rel mannosyl-3- 23.7 1.5E+02 0.0033 22.0 4.2 28 99-126 29-56 (221)
326 PF13580 SIS_2: SIS domain; PD 23.6 1.2E+02 0.0026 20.8 3.3 36 154-189 95-137 (138)
327 TIGR00099 Cof-subfamily Cof su 23.4 1.4E+02 0.003 22.8 4.0 38 90-127 17-57 (256)
328 COG0561 Cof Predicted hydrolas 23.3 1.2E+02 0.0026 23.4 3.6 38 90-127 21-61 (264)
329 PF04312 DUF460: Protein of un 23.0 1.1E+02 0.0025 21.2 2.9 15 5-19 44-58 (138)
330 PF13549 ATP-grasp_5: ATP-gras 22.9 98 0.0021 23.5 2.9 73 148-220 12-90 (222)
331 PRK14129 heat shock protein Hs 22.8 50 0.0011 21.6 1.1 15 4-18 19-33 (105)
332 PF11071 DUF2872: Protein of u 22.8 1.5E+02 0.0032 20.5 3.4 51 165-215 77-140 (141)
333 cd00545 MCH Methenyltetrahydro 22.7 2.2E+02 0.0049 22.9 4.8 47 117-167 118-164 (312)
334 PF07453 NUMOD1: NUMOD1 domain 22.7 1.2E+02 0.0026 15.2 2.5 14 5-18 2-15 (37)
335 PF03698 UPF0180: Uncharacteri 22.6 1.5E+02 0.0032 18.5 3.1 7 203-209 67-73 (80)
336 TIGR03120 one_C_mch methenylte 22.2 2.3E+02 0.005 22.8 4.8 47 117-167 118-164 (312)
337 PRK15126 thiamin pyrimidine py 22.2 1.4E+02 0.0029 23.2 3.7 37 92-128 22-61 (272)
338 PF06117 DUF957: Enterobacteri 22.2 88 0.0019 18.4 1.9 22 5-27 25-46 (65)
339 PF06437 ISN1: IMP-specific 5' 21.8 61 0.0013 26.8 1.7 19 3-21 146-164 (408)
340 PF04007 DUF354: Protein of un 21.5 91 0.002 25.4 2.6 87 96-192 18-113 (335)
341 PRK05299 rpsB 30S ribosomal pr 21.5 2.4E+02 0.0052 22.1 4.8 45 164-208 159-207 (258)
342 PRK02264 N(5),N(10)-methenylte 21.3 2.4E+02 0.0052 22.7 4.8 48 117-168 119-166 (317)
343 cd01445 TST_Repeats Thiosulfat 21.1 2.7E+02 0.0059 19.1 4.7 41 148-188 80-128 (138)
344 PRK14572 D-alanyl-alanine synt 21.0 4.6E+02 0.01 21.3 7.3 96 114-216 104-205 (347)
345 PTZ00135 60S acidic ribosomal 20.6 2.7E+02 0.0059 22.5 5.1 35 92-126 73-108 (310)
346 PF12812 PDZ_1: PDZ-like domai 20.6 2.2E+02 0.0048 17.5 5.6 54 152-214 20-75 (78)
347 PF02350 Epimerase_2: UDP-N-ac 20.6 1.2E+02 0.0027 24.7 3.3 83 105-191 12-100 (346)
348 TIGR00200 cinA_nterm competenc 20.5 4E+02 0.0086 22.6 6.2 32 147-178 21-52 (413)
349 TIGR00877 purD phosphoribosyla 20.4 4.1E+02 0.0088 22.2 6.4 69 148-217 105-175 (423)
350 PRK12702 mannosyl-3-phosphogly 20.3 1.7E+02 0.0037 23.5 3.8 37 92-128 21-60 (302)
351 PF02289 MCH: Cyclohydrolase ( 20.1 1.8E+02 0.0039 23.5 3.9 58 107-168 105-165 (313)
352 PF03332 PMM: Eukaryotic phosp 20.0 1.3E+02 0.0028 22.9 3.0 30 162-191 175-208 (220)
No 1
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=100.00 E-value=1.6e-33 Score=200.84 Aligned_cols=217 Identities=54% Similarity=0.941 Sum_probs=199.2
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhhCC
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGR 82 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (238)
++++++||+|.||++.+..+....++.|.+|+..++|++.+.+.+++..+++.||.++.++...++..+..+|.+++++.
T Consensus 14 ~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~~ 93 (244)
T KOG3109|consen 14 NYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHGR 93 (244)
T ss_pred cceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhcc
Confidence 47999999999999999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred CCCCCCCCChhHHHHHhcCCCC-eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCC--CCCCchHHHHHH-HHhc
Q 035566 83 LPYENLKPDPVLRNLLLSLPIR-KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTN--KTTGQELQLISM-LRMV 158 (238)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~l~~~-~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k--~~~~~~~~~~~~-~~~~ 158 (238)
++++.++|.+.++.+|-.++.+ +++.||++..++.++++.+|+.++|+.+++++.....+ -.-||....++. .+..
T Consensus 94 LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~a 173 (244)
T KOG3109|consen 94 LPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVA 173 (244)
T ss_pred CcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHh
Confidence 9999999999999999999988 89999999999999999999999999999988665311 111347777775 7889
Q ss_pred CCC-CCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhhhccc
Q 035566 159 AHH-FFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADE 219 (238)
Q Consensus 159 ~~~-~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~~~~ 219 (238)
|++ |++++||+||.++|+.|++.||++++++.......+++++.+..+..+.++.+|+..+
T Consensus 174 gi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~~ 235 (244)
T KOG3109|consen 174 GIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKIKGVDYALEQIHNNKEALPELWEILE 235 (244)
T ss_pred CCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecccchHHHHHHhhchhhhchHHhhccc
Confidence 997 9999999999999999999999999999988888999999999999999999999876
No 2
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.97 E-value=9.1e-29 Score=182.12 Aligned_cols=183 Identities=45% Similarity=0.801 Sum_probs=146.6
Q ss_pred eEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhhCCCC
Q 035566 5 ECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLP 84 (238)
Q Consensus 5 k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (238)
++|+||+||||+|+.+.+...+.+.+.++...++|++......+...++..+|....++... ...+.+.+...+.....
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLP 79 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCC
Confidence 47999999999998788888888877777777889987776666666666666555554432 34455666666655433
Q ss_pred CCCCCCChhHHHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCC
Q 035566 85 YENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFF 163 (238)
Q Consensus 85 ~~~~~~~~~~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~ 163 (238)
...++++||+.++|+.|+.+.+++||++...+...++.+|+..+|+.++++++.+...+..||.+.++.. ++++|++|+
T Consensus 80 ~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 80 YEKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred HHhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 3467899999999999998889999999999999999999999999999998877642222347777775 899999999
Q ss_pred eEEEEeCCccchhHHHhcCCeEEEe
Q 035566 164 QRLFFDDSTRNIECGKSIGLHTVLV 188 (238)
Q Consensus 164 ~~v~vgD~~~di~~a~~~G~~~i~v 188 (238)
++++|||+..|+.+|+++|+++|+|
T Consensus 160 ~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 160 RAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred ceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 9999999999999999999999875
No 3
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.96 E-value=8.6e-29 Score=186.77 Aligned_cols=200 Identities=22% Similarity=0.269 Sum_probs=145.3
Q ss_pred CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhc--cCC------CCh
Q 035566 1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV--GYD------FDN 72 (238)
Q Consensus 1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~ 72 (238)
||+++.|+||+||||+|+...+..+++ ..++.+|.+......+... .|......... +.. ...
T Consensus 1 ~~~~~~iiFDlDGTL~Ds~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~----ig~~~~~~~~~~~~~~~~~~~~~~~ 71 (220)
T COG0546 1 MMMIKAILFDLDGTLVDSAEDILRAFN-----AALAELGLPPLDEEEIRQL----IGLGLDELIERLLGEADEEAAAELV 71 (220)
T ss_pred CCCCCEEEEeCCCccccChHHHHHHHH-----HHHHHcCCCCCCHHHHHHH----hcCCHHHHHHHHhccccchhHHHHH
Confidence 678999999999999998777777765 3677788875433332221 22222211110 000 011
Q ss_pred HhHHHhhhCCCCCC-CCCCChhHHHHHhcCCCCe---EEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCch
Q 035566 73 DDYHSFVHGRLPYE-NLKPDPVLRNLLLSLPIRK---VIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQE 148 (238)
Q Consensus 73 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~---~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~ 148 (238)
+.+.+.+....... ...++||+.++|..++.++ +|+||.+...++.+++++|+..+|+.+++.++....|| .+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP---~P 148 (220)
T COG0546 72 ERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKP---DP 148 (220)
T ss_pred HHHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCc---CH
Confidence 22222222111111 2578999999999998764 79999999999999999999999999999666777766 33
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhH
Q 035566 149 LQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFP 212 (238)
Q Consensus 149 ~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~ 212 (238)
..+...++++|++|++++||||+.+|+.+|+++|++++++.++.. ...+|+++.++.||...+.
T Consensus 149 ~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 149 EPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred HHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 444456999999988999999999999999999999999988752 5569999999999988764
No 4
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.96 E-value=2.6e-28 Score=183.87 Aligned_cols=197 Identities=17% Similarity=0.220 Sum_probs=140.5
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHh----HHHh
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDD----YHSF 78 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 78 (238)
++++|+||+||||+|+...+..++.+ ++++++.......+ +...+|.+.......-.....+. +...
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~-----~~~~~~~~~~~~~~----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLH-----TLKTYYPNQYKRED----VLPFIGPSLHDTFSKIDESKVEEMITTYREF 72 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHH-----HHHHhCCCCCCHHH----HHHHhCcCHHHHHHhcCHHHHHHHHHHHHHH
Confidence 58999999999999976655555554 44445443211111 22233544333222101111112 2221
Q ss_pred hhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-H
Q 035566 79 VHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-M 154 (238)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~ 154 (238)
... .......++||+.++|+.|+.+ .+|+||+....+...++.+|+..+|+.+++++.....|| ++..+. +
T Consensus 73 ~~~-~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp----~p~~~~~~ 147 (214)
T PRK13288 73 NHE-HHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKP----DPEPVLKA 147 (214)
T ss_pred HHH-hhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCC----CcHHHHHH
Confidence 211 1123467899999999998754 579999999999999999999999999999888777776 555555 5
Q ss_pred HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHH
Q 035566 155 LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPE 213 (238)
Q Consensus 155 ~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~ 213 (238)
+++++++|+++++|||+.+|+++|+++|++++++.++.. ...++++++++.++.+++.+
T Consensus 148 ~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~~ 212 (214)
T PRK13288 148 LELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVGD 212 (214)
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHhh
Confidence 899999999999999999999999999999999988742 34689999999999887654
No 5
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.96 E-value=1.1e-27 Score=186.21 Aligned_cols=206 Identities=16% Similarity=0.130 Sum_probs=141.9
Q ss_pred CCceeEEEEecCCceeeCccch-hhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhh--------------h-h
Q 035566 1 MTKYECLLFDVDDTLYSHSYGF-SNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG--------------L-K 64 (238)
Q Consensus 1 M~~~k~vifD~DGTL~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--------------~-~ 64 (238)
||++|+|+||+||||+|+.... ..++.+ +++++|.+... ..+ ...+|..... + .
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~-~~~----~~~~G~~~~~~~~~~~~~~~~~~~~~~ 70 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVE-----AFAQFGVEITL-EEA----RGPMGLGKWDHIRALLKMPRVAARWQA 70 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHH-----HHHHcCCCCCH-HHH----HHhcCCCHHHHHHHHHhcHHHHHHHHH
Confidence 8889999999999999964332 344443 44556765322 111 1111211100 0 0
Q ss_pred hccCCCChH-------hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc-ceee
Q 035566 65 AVGYDFDND-------DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF-DGIV 133 (238)
Q Consensus 65 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f-~~i~ 133 (238)
..+.....+ .+...+.... .....++||+.++|+.|+.+ .+|+||+....+..+++.+++.++| +.++
T Consensus 71 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~ 149 (267)
T PRK13478 71 VFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVV 149 (267)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEE
Confidence 111111111 1121111111 23468899999999999754 5799999999999999999888875 8888
Q ss_pred ecccCCCCCCCCCchHHHHH-HHHhcCCC-CCeEEEEeCCccchhHHHhcCCeEEEecCCCC------------------
Q 035566 134 NFESLNPTNKTTGQELQLIS-MLRMVAHH-FFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------------------ 193 (238)
Q Consensus 134 ~~~~~~~~k~~~~~~~~~~~-~~~~~~~~-~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------------------ 193 (238)
++++....|| .+.++. +++++|+. |++|++|||+.+|+++|+++|+.+|++.++..
T Consensus 150 ~~~~~~~~KP----~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 150 TTDDVPAGRP----YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred cCCcCCCCCC----ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHH
Confidence 8887777776 666666 58999996 69999999999999999999999999987642
Q ss_pred -----------CccccccccChhHHHHHhHHhhhccccc
Q 035566 194 -----------TKGADYALENIHNIREAFPELWDADEIS 221 (238)
Q Consensus 194 -----------~~~ad~v~~~~~el~~~l~~~~~~~~~~ 221 (238)
..+|+++++++.+|.+++..+..++..+
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~~~~~ 264 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIADIEARLARG 264 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHHHhcC
Confidence 4569999999999999887766655444
No 6
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.95 E-value=6e-28 Score=185.39 Aligned_cols=192 Identities=21% Similarity=0.255 Sum_probs=134.9
Q ss_pred CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCC----ChhHHHHHHHHHHHhhccchhhhhhccC--CCC----
Q 035566 2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGI----EESEVSEFNRVLYKNYGTSMAGLKAVGY--DFD---- 71 (238)
Q Consensus 2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---- 71 (238)
.++++|+||+||||+|+...+..++.+ +++++|. +.... .+. ....|.........-. ...
T Consensus 20 ~~~k~viFDlDGTLiDs~~~~~~a~~~-----~~~~~g~~~g~~~~~~-~~~---~~~~G~~~~~~~~~~~~~~~~~~~~ 90 (248)
T PLN02770 20 APLEAVLFDVDGTLCDSDPLHYYAFRE-----MLQEINFNGGVPITEE-FFV---ENIAGKHNEDIALGLFPDDLERGLK 90 (248)
T ss_pred CccCEEEEcCCCccCcCHHHHHHHHHH-----HHHHhccccCCCCCHH-HHH---HHcCCCCHHHHHHHHcCcchhhHHH
Confidence 468999999999999976666666664 3444432 22221 111 1112322222111000 000
Q ss_pred -hHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCc
Q 035566 72 -NDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQ 147 (238)
Q Consensus 72 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~ 147 (238)
...+...+.. .......++||+.++|+.|+.+ .+|+||+....+...++++|+.++|+.++++++....||
T Consensus 91 ~~~~~~~~y~~-~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP---- 165 (248)
T PLN02770 91 FTDDKEALFRK-LASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKP---- 165 (248)
T ss_pred HHHHHHHHHHH-HHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCC----
Confidence 0111111221 1113468899999999988644 689999999999999999999999999999998887776
Q ss_pred hHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHH
Q 035566 148 ELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNI 207 (238)
Q Consensus 148 ~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el 207 (238)
.+.++. +++++|++|++|++|||+..|+++|+++|+++|++.++.. ..+++++++++.|+
T Consensus 166 ~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 166 HPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred ChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhh
Confidence 666666 4899999999999999999999999999999999987643 34789999999993
No 7
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.95 E-value=1.9e-27 Score=180.13 Aligned_cols=197 Identities=18% Similarity=0.238 Sum_probs=136.3
Q ss_pred CCceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-----hhccCCCChHhH
Q 035566 1 MTKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-----KAVGYDFDNDDY 75 (238)
Q Consensus 1 M~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 75 (238)
|+++++|+||+||||+|+......++.+ .+.++|++.... .+...+ .|...... ...+...+.+++
T Consensus 1 ~~~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~-~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (221)
T PRK10563 1 MSQIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSLE-EVFKRF---KGVKLYEIIDIISKEHGVTLAKAEL 71 (221)
T ss_pred CCCCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCHH-HHHHHh---cCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 7889999999999999965544455543 445677653321 111111 12211111 111222333333
Q ss_pred HHhhhC---CCCCCCCCCChhHHHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccc-eeeecccCCCCCCCCCchHHH
Q 035566 76 HSFVHG---RLPYENLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFD-GIVNFESLNPTNKTTGQELQL 151 (238)
Q Consensus 76 ~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~-~i~~~~~~~~~k~~~~~~~~~ 151 (238)
...+.. ........++||+.++|+.|+.+.+|+||++...+...++++|+.++|+ .++++++.+..|| .+++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP----~p~~ 147 (221)
T PRK10563 72 EPVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKP----DPAL 147 (221)
T ss_pred HHHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCC----ChHH
Confidence 322211 1112357889999999999998899999999999999999999999996 5677777777776 7777
Q ss_pred HHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHH
Q 035566 152 ISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREA 210 (238)
Q Consensus 152 ~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~ 210 (238)
+.. ++++|++|++|++|||+..|+++|+++|++++++.++.. ...++.++.++.||.++
T Consensus 148 ~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 211 (221)
T PRK10563 148 MFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPEL 211 (221)
T ss_pred HHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHHH
Confidence 775 899999999999999999999999999999998865432 22345567777777654
No 8
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.95 E-value=1.5e-27 Score=181.31 Aligned_cols=195 Identities=15% Similarity=0.139 Sum_probs=138.0
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhc-cCCCC-------hHh
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV-GYDFD-------NDD 74 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~ 74 (238)
++++|+||+||||+|+...+..++.. +++++|.+......+.. ..|......... ..... .+.
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNA-----MLAARGRAPITLAQLRP----VVSKGARAMLAVAFPELDAAARDALIPE 81 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----HhhhHHHHHHHHHhccCChHHHHHHHHH
Confidence 36899999999999976655555553 55667765332222221 112222211110 00011 122
Q ss_pred HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHH
Q 035566 75 YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQL 151 (238)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~ 151 (238)
+.+.+..... ...+++||+.++|+.|+.+ .+++||+........++++|+.++|+.+++++.....|| ++.+
T Consensus 82 ~~~~~~~~~~-~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP----~p~~ 156 (229)
T PRK13226 82 FLQRYEALIG-TQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKP----HPLP 156 (229)
T ss_pred HHHHHHHhhh-hcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCC----CHHH
Confidence 3333332222 3467899999999998654 579999998888889999999999999888877766666 6666
Q ss_pred HH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-------CccccccccChhHHHHHh
Q 035566 152 IS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-------TKGADYALENIHNIREAF 211 (238)
Q Consensus 152 ~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-------~~~ad~v~~~~~el~~~l 211 (238)
+. +++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ..+++++++++.||.+.+
T Consensus 157 ~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 157 LLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA 224 (229)
T ss_pred HHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence 66 4899999999999999999999999999999999977652 235899999999997754
No 9
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.95 E-value=7.2e-27 Score=179.62 Aligned_cols=200 Identities=10% Similarity=0.111 Sum_probs=139.9
Q ss_pred ceeEEEEecCCceeeCccchhh-HHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhh-c-cCCCChH---h--
Q 035566 3 KYECLLFDVDDTLYSHSYGFSN-KCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKA-V-GYDFDND---D-- 74 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~---~-- 74 (238)
.+++|+|||||||+|+...++. ++. .+++++|++...... .....|........ . ......+ .
T Consensus 23 ~~k~vIFDlDGTLvDS~~~~~~~a~~-----~~~~~~G~~~~~~e~----~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~ 93 (260)
T PLN03243 23 GWLGVVLEWEGVIVEDDSELERKAWR-----ALAEEEGKRPPPAFL----LKRAEGMKNEQAISEVLCWSRDFLQMKRLA 93 (260)
T ss_pred CceEEEEeCCCceeCCchHHHHHHHH-----HHHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhccCCCHHHHHHHH
Confidence 3789999999999996555543 444 356667876433211 11123433222211 0 0011111 1
Q ss_pred --HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchH
Q 035566 75 --YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQEL 149 (238)
Q Consensus 75 --~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~ 149 (238)
+...+. ........++||+.++|+.|+.+ .+|+||+....+..+++++|+..+|+.++++++....|| .+
T Consensus 94 ~~~~~~~~-~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP----~P 168 (260)
T PLN03243 94 IRKEDLYE-YMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKP----DP 168 (260)
T ss_pred HHHHHHHH-HHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCC----CH
Confidence 111111 11123467899999999998754 579999999999999999999999999999988877776 77
Q ss_pred HHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC---CccccccccChhHHHHHhHHhhh
Q 035566 150 QLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR---TKGADYALENIHNIREAFPELWD 216 (238)
Q Consensus 150 ~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~---~~~ad~v~~~~~el~~~l~~~~~ 216 (238)
.++.. ++++|++|++|++|||+..|+++|+++|+.+|++..... ...+++++.++.+|....-.-+.
T Consensus 169 e~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~~ 239 (260)
T PLN03243 169 EMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNLS 239 (260)
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhhh
Confidence 77765 899999999999999999999999999999999963321 34689999999998766443333
No 10
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.95 E-value=2.1e-26 Score=174.35 Aligned_cols=195 Identities=14% Similarity=0.128 Sum_probs=137.3
Q ss_pred eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhh-c--cCCCCh---H----
Q 035566 4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKA-V--GYDFDN---D---- 73 (238)
Q Consensus 4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~---~---- 73 (238)
+|+|+||+||||+|+.+.+..++.+ +.++.|.+...... .+. ..|........ . ....+. +
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~-~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQ-----AVTAAGLSPTPEEV-QSA---WMGQSKIEAIRALLALDGADEAEAQAAFA 71 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHH-----HHHHcCCCCCHHHH-HHh---hcCCCHHHHHHHHHhccCCCHHHHHHHHH
Confidence 5899999999999977666666654 44556775433211 110 12322222111 0 011111 1
Q ss_pred hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcc--cccceeeecccCCCCCCCCCch
Q 035566 74 DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLE--DCFDGIVNFESLNPTNKTTGQE 148 (238)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~--~~f~~i~~~~~~~~~k~~~~~~ 148 (238)
.+.+.+.........+++||+.++|+.++.+ .+|+||+....+..+++++|+. ++|+.++++++....|| .
T Consensus 72 ~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP----~ 147 (220)
T TIGR03351 72 DFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRP----A 147 (220)
T ss_pred HHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCC----C
Confidence 1222222222223468999999999999754 5799999999999999999998 99999999888776665 6
Q ss_pred HHHHHH-HHhcCCC-CCeEEEEeCCccchhHHHhcCCeE-EEecCCCC------CccccccccChhHHHHHh
Q 035566 149 LQLISM-LRMVAHH-FFQRLFFDDSTRNIECGKSIGLHT-VLVGTSRR------TKGADYALENIHNIREAF 211 (238)
Q Consensus 149 ~~~~~~-~~~~~~~-~~~~v~vgD~~~di~~a~~~G~~~-i~v~~~~~------~~~ad~v~~~~~el~~~l 211 (238)
+.++.. ++++|+. |++|++|||+.+|+.+|+++|+.+ +++.++.. ..+++++++++.+|..++
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPALL 219 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHhh
Confidence 666665 8999997 799999999999999999999999 88877642 356889999999987654
No 11
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.95 E-value=5.3e-26 Score=171.86 Aligned_cols=201 Identities=17% Similarity=0.194 Sum_probs=136.3
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccc-----hhhhhhccCCCChHhHHH
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTS-----MAGLKAVGYDFDNDDYHS 77 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 77 (238)
++|+|+|||||||+|+. .....+.+...+.+.+..|.+...........+...+.. ...+.. ........+..
T Consensus 9 ~~k~vIFDlDGTL~d~~-~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 86 (224)
T PRK14988 9 DVDTVLLDMDGTLLDLA-FDNYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSE-RLGLDICAMTT 86 (224)
T ss_pred cCCEEEEcCCCCccchh-hhchHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHH-HhCCCHHHHHH
Confidence 57999999999999942 112334443444455677887554322111111111100 001111 01111111111
Q ss_pred hhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH
Q 035566 78 FVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM 154 (238)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~ 154 (238)
. ......++||+.++|+.|+.+ .+++||+....+...++++|+..+|+.++++++.+..|| .++++..
T Consensus 87 ~-----~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP----~p~~~~~ 157 (224)
T PRK14988 87 E-----QGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKE----DQRLWQA 157 (224)
T ss_pred H-----HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCC----CHHHHHH
Confidence 1 113468899999999999765 579999999999999999999999999999888887776 7777775
Q ss_pred -HHhcCCCCCeEEEEeCCccchhHHHhcCCeE-EEecCCCC--CccccccccChhHHHHHhHHh
Q 035566 155 -LRMVAHHFFQRLFFDDSTRNIECGKSIGLHT-VLVGTSRR--TKGADYALENIHNIREAFPEL 214 (238)
Q Consensus 155 -~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~-i~v~~~~~--~~~ad~v~~~~~el~~~l~~~ 214 (238)
++++|++|++|++|||+..|+++|+++|+++ +++.++.. ...+..+..++.++.+++..+
T Consensus 158 ~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (224)
T PRK14988 158 VAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSL 221 (224)
T ss_pred HHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhh
Confidence 8999999999999999999999999999975 66766553 345556678888887766544
No 12
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.95 E-value=1.6e-26 Score=178.39 Aligned_cols=122 Identities=16% Similarity=0.135 Sum_probs=104.2
Q ss_pred CCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc-ceeeecccCCCCCCCCCchHHHHH-HHHhcCC
Q 035566 86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF-DGIVNFESLNPTNKTTGQELQLIS-MLRMVAH 160 (238)
Q Consensus 86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f-~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~ 160 (238)
....++||+.++|+.|+.+ .+|+||++...+..+++++|+..+| +.++++++....|| .+.++. +++++|+
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP----~p~~~~~a~~~l~~ 171 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRP----APWMALKNAIELGV 171 (253)
T ss_pred hcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCC----CHHHHHHHHHHcCC
Confidence 3468899999999999754 5799999999999999999999986 88888888777776 666666 4899999
Q ss_pred C-CCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----------------------------CccccccccChhHHHHH
Q 035566 161 H-FFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----------------------------TKGADYALENIHNIREA 210 (238)
Q Consensus 161 ~-~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----------------------------~~~ad~v~~~~~el~~~ 210 (238)
. |++|++|||+++|+.+|+++|+.+|++.++.. ..+|+++++++.||.++
T Consensus 172 ~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el~~~ 251 (253)
T TIGR01422 172 YDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAELPAV 251 (253)
T ss_pred CCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHHHHh
Confidence 5 99999999999999999999999999987642 35689999999998765
Q ss_pred h
Q 035566 211 F 211 (238)
Q Consensus 211 l 211 (238)
+
T Consensus 252 ~ 252 (253)
T TIGR01422 252 I 252 (253)
T ss_pred h
Confidence 4
No 13
>PRK11587 putative phosphatase; Provisional
Probab=99.94 E-value=1.7e-26 Score=174.44 Aligned_cols=190 Identities=16% Similarity=0.174 Sum_probs=131.2
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-hhccCCCChHh----HHH
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-KAVGYDFDNDD----YHS 77 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~ 77 (238)
++++|+||+||||+|+...+..++.+ +++++|++...... . ..|...... .........+. +..
T Consensus 2 ~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~---~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPAVERAWSN-----WADRHGIAPDEVLN---F---IHGKQAITSLRHFMAGASEAEIQAEFTR 70 (218)
T ss_pred CCCEEEEcCCCCcCcCHHHHHHHHHH-----HHHHcCCCHHHHHH---H---HcCCCHHHHHHHHhccCCcHHHHHHHHH
Confidence 58999999999999976666566653 55667876432111 1 113222111 11100111111 211
Q ss_pred h-hhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH
Q 035566 78 F-VHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS 153 (238)
Q Consensus 78 ~-~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~ 153 (238)
. ..........+++||+.++|+.|+.+ .+++||+........++..++ .+|+.+++++.....|| .+..+.
T Consensus 71 ~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP----~p~~~~ 145 (218)
T PRK11587 71 LEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRGKP----EPDAYL 145 (218)
T ss_pred HHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCCCC----CcHHHH
Confidence 1 00111124568899999999988654 679999988888888888888 45778888777766666 666666
Q ss_pred H-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC---CccccccccChhHHH
Q 035566 154 M-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR---TKGADYALENIHNIR 208 (238)
Q Consensus 154 ~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~---~~~ad~v~~~~~el~ 208 (238)
. ++++|++|++|++|||+..|+++|+++|+.+++++++.. ...++++++++.||.
T Consensus 146 ~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 146 LGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred HHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence 5 899999999999999999999999999999999987653 346889999999874
No 14
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.94 E-value=2.5e-26 Score=182.61 Aligned_cols=204 Identities=10% Similarity=0.097 Sum_probs=143.1
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhc--cCCCCh---H----
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV--GYDFDN---D---- 73 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~---- 73 (238)
.+++|+|||||||+|+...+....+. .+.+++|++......+ ....|.+....... ....+. +
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~----~l~~e~G~~~~~~e~~----~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~ 201 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWL----TLAQEEGKSPPPAFIL----RRVEGMKNEQAISEVLCWSRDPAELRRMAT 201 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHH----HHHHHcCCCCCHHHHH----HHhcCCCHHHHHHHHhhccCCHHHHHHHHH
Confidence 57899999999999965545543332 2556778764432211 12234333322111 001111 1
Q ss_pred hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHH
Q 035566 74 DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ 150 (238)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~ 150 (238)
.+.+.+.... .....++||+.++|+.|+.+ .+|+||+....++.+++++|+.++|+.++++++....|| ++.
T Consensus 202 ~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP----~Pe 276 (381)
T PLN02575 202 RKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKP----DPE 276 (381)
T ss_pred HHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCC----CHH
Confidence 1222222222 23467899999999998654 679999999999999999999999999999998877776 777
Q ss_pred HHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC---CccccccccChhHHHHHhHHhhhccc
Q 035566 151 LISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR---TKGADYALENIHNIREAFPELWDADE 219 (238)
Q Consensus 151 ~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~---~~~ad~v~~~~~el~~~l~~~~~~~~ 219 (238)
++.. ++++|++|++|++|||+..|+++|+++|+.+|+++++.. ...++++++++.||....-+-+...+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~~ 349 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNLADIE 349 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhhhhhcC
Confidence 7764 899999999999999999999999999999999987543 33589999999998644333344443
No 15
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.94 E-value=3.7e-26 Score=173.14 Aligned_cols=197 Identities=21% Similarity=0.336 Sum_probs=131.9
Q ss_pred eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChh--HHHHHHHHHHHhhccch----hhh-hhccCCCChH---
Q 035566 4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEES--EVSEFNRVLYKNYGTSM----AGL-KAVGYDFDND--- 73 (238)
Q Consensus 4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~--- 73 (238)
+++|+||+||||+++.+.+..++.... + .....|.+.. ............++... ... .........+
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~-~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAI-E-VLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVA 79 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHH-H-HHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHH
Confidence 789999999999997666555544322 2 2334454432 21111111112222111 111 1111111111
Q ss_pred hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHH
Q 035566 74 DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ 150 (238)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~ 150 (238)
.+...+.. .....+.++||+.++|+.|+.+ .+++||+....+...++++|+..+|+.++++++.+..|| .+.
T Consensus 80 ~~~~~~~~-~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP----~~~ 154 (221)
T TIGR02253 80 AFVYAYHK-LKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKP----HPK 154 (221)
T ss_pred HHHHHHHH-HHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCC----CHH
Confidence 11111111 1113468899999999998754 579999999999999999999999999999988888876 666
Q ss_pred HHHH-HHhcCCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC-------CccccccccChhHH
Q 035566 151 LISM-LRMVAHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR-------TKGADYALENIHNI 207 (238)
Q Consensus 151 ~~~~-~~~~~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~-------~~~ad~v~~~~~el 207 (238)
++.. ++++|++|+++++|||+. +|+.+|+++|+.+|++.++.. ...+++++.++.||
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 6664 899999999999999998 899999999999999987653 23578888888775
No 16
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.94 E-value=2e-26 Score=174.56 Aligned_cols=193 Identities=16% Similarity=0.178 Sum_probs=136.2
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhh-----hccC-CCChHhH-
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK-----AVGY-DFDNDDY- 75 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~- 75 (238)
++++|+||+||||+|+...+..++.+ +++++|++......+. ...|....... .... ......+
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRREELP----DTLGLRIDQVVDLWYARQPWNGPSRQEVV 76 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHH-----HHHHCCCCCCHHHHHH----HhhCCCHHHHHHHHHHhcCCCCCCHHHHH
Confidence 48999999999999965544444442 5566776543322221 11222211111 0011 1112221
Q ss_pred ---HHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchH
Q 035566 76 ---HSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQEL 149 (238)
Q Consensus 76 ---~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~ 149 (238)
.+.+.+.+ .....++||+.++|+.++.+ .+|+||+....+...++.+++..+|+.+++++..+..|| .+
T Consensus 77 ~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp----~~ 151 (222)
T PRK10826 77 QRIIARVISLI-EETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKP----HP 151 (222)
T ss_pred HHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCC----CH
Confidence 11121111 23468999999999988644 689999999999999999999999999999888777776 55
Q ss_pred HHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHHH
Q 035566 150 QLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIRE 209 (238)
Q Consensus 150 ~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~~ 209 (238)
.+++ +++.+|++|++|++|||+.+|+++|+++|+++|+++.+.. ...+++++.++.||..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTA 217 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhh
Confidence 5555 5899999999999999999999999999999999987653 2368999999999864
No 17
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=8.4e-26 Score=174.79 Aligned_cols=197 Identities=17% Similarity=0.225 Sum_probs=138.1
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhh-ccCC-CChH----hHH
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKA-VGYD-FDND----DYH 76 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~----~~~ 76 (238)
++++++||+||||+|+.+.+...+.+ +.+++|++...... +....+........ .+.. ...+ .+.
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~~~~~~~----~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANA-----HAPDFGYDPIDERD----YAQLRQWSSRTIVRRAGLSPWQQARLLQRVQ 131 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHH
Confidence 47899999999999976666555553 55677765332211 11112222221111 1111 0111 222
Q ss_pred HhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH
Q 035566 77 SFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS 153 (238)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~ 153 (238)
+.+... ...++++||+.++|+.|+.+ .+|+||+....+...++++|+.++|+.+++.+... + +...+..
T Consensus 132 ~~~~~~--~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~---~---k~~~~~~ 203 (273)
T PRK13225 132 RQLGDC--LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL---S---KRRALSQ 203 (273)
T ss_pred HHHHhh--cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC---C---CHHHHHH
Confidence 222221 24568899999999999754 57999999999999999999999999887665432 1 2344555
Q ss_pred HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHHhhh
Q 035566 154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPELWD 216 (238)
Q Consensus 154 ~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~~~~ 216 (238)
++++++++|++|++|||+.+|+++|+++|+.+|++.++.. ...|+++++++.+|.+++.++.+
T Consensus 204 ~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~~~~ 272 (273)
T PRK13225 204 LVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQLMR 272 (273)
T ss_pred HHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHHHhc
Confidence 6899999999999999999999999999999999988753 34699999999999998877653
No 18
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.94 E-value=6.7e-26 Score=170.78 Aligned_cols=190 Identities=17% Similarity=0.196 Sum_probs=133.6
Q ss_pred EEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh----h-hccCCCCh-------Hh
Q 035566 7 LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL----K-AVGYDFDN-------DD 74 (238)
Q Consensus 7 vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~-------~~ 74 (238)
|+||+||||+|+...+..+++. ..+++|.+......+. ...|...... . ..+...+. ..
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNM-----ALAALGLPPATLARVI----GFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL 71 (213)
T ss_pred CeecCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHH----HHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence 6899999999975555555543 5566776532222221 1123222111 1 01111111 11
Q ss_pred HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHH
Q 035566 75 YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQL 151 (238)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~ 151 (238)
+.+.+.... .....++||+.++|+.++.+ .+|+||+....+...++++|+..+|+.+++++.....|| .+.+
T Consensus 72 ~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp----~p~~ 146 (213)
T TIGR01449 72 FDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKP----HPDP 146 (213)
T ss_pred HHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCC----ChHH
Confidence 222222222 23467899999999998754 679999999999999999999999999998887777776 6666
Q ss_pred HH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHH
Q 035566 152 IS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREA 210 (238)
Q Consensus 152 ~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~ 210 (238)
+. +++++|++|+++++|||+.+|+.+|+++|++++++.++.. ...++++++++.+|..+
T Consensus 147 ~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 147 LLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred HHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 65 5899999999999999999999999999999999976542 35689999999998764
No 19
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.94 E-value=8.9e-26 Score=169.01 Aligned_cols=190 Identities=15% Similarity=0.228 Sum_probs=134.5
Q ss_pred EEEecCCceeeCccchhhHHHHHHHHHHHHH-hCCChhHHHHHHHHHHHhhccchhhhhh-ccCCCC-hHhHHHhhhCCC
Q 035566 7 LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQK-LGIEESEVSEFNRVLYKNYGTSMAGLKA-VGYDFD-NDDYHSFVHGRL 83 (238)
Q Consensus 7 vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~ 83 (238)
|+||+||||+|+.+.+..++.+ ..++ .|.+...... +.+..|.....+.. .+.... ...+...... .
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 70 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAI-----AYREVVGDGPAPFEE----YRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR-L 70 (205)
T ss_pred CeecCcCccccCHHHHHHHHHH-----HHHHhcCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH-h
Confidence 6899999999976666666664 3333 3543222111 22222333322211 121111 1112222221 1
Q ss_pred CCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcC
Q 035566 84 PYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVA 159 (238)
Q Consensus 84 ~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~ 159 (238)
...+.++||+.++|+.|+.+ .+|+||+....+...++++|+..+|+.++++++....|| ++.++. +++++|
T Consensus 71 -~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP----~~~~~~~~~~~~~ 145 (205)
T TIGR01454 71 -AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKP----APDIVREALRLLD 145 (205)
T ss_pred -hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCC----ChHHHHHHHHHcC
Confidence 24578899999999988654 679999999999999999999999999998887776665 566555 589999
Q ss_pred CCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHh
Q 035566 160 HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAF 211 (238)
Q Consensus 160 ~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l 211 (238)
++|+++++|||+.+|+.+|+++|++++++.++.. ..+++++++++.+|..++
T Consensus 146 ~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 146 VPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC 203 (205)
T ss_pred CChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence 9999999999999999999999999999987753 456899999999998754
No 20
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=8.1e-26 Score=175.52 Aligned_cols=198 Identities=17% Similarity=0.220 Sum_probs=139.4
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhc-------cCCCCh---
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAV-------GYDFDN--- 72 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--- 72 (238)
.+++|+||+||||+|+...+...+. .+.+++|.+......+.. ..|.....+... ....+.
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~-----~~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 82 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVD-----RMLLELGRPPAGLEAVRH----WVGNGAPVLVRRALAGSIDHDGVDDELA 82 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHH-----HHHHHcCCCCCCHHHHHH----HhChhHHHHHHHHhcccccccCCCHHHH
Confidence 3789999999999997665555554 366777876433222211 112221111100 011111
Q ss_pred Hh----HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCC
Q 035566 73 DD----YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTT 145 (238)
Q Consensus 73 ~~----~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~ 145 (238)
+. +.+.+... .....++||+.++|+.++.+ .+++||++...+...++++++..+|+.+++++.....||
T Consensus 83 ~~~~~~~~~~~~~~--~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp-- 158 (272)
T PRK13223 83 EQALALFMEAYADS--HELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKP-- 158 (272)
T ss_pred HHHHHHHHHHHHhc--CcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCC--
Confidence 11 22222221 12357899999999998654 579999999999999999999999999988887766665
Q ss_pred CchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHHhh
Q 035566 146 GQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPELW 215 (238)
Q Consensus 146 ~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~~~ 215 (238)
.+.++. +++++|++|++|++|||+.+|+++|+++|++++++.++.. ...++++++++.+|.+++....
T Consensus 159 --~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~~~~ 233 (272)
T PRK13223 159 --DPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCADPA 233 (272)
T ss_pred --CcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHhccc
Confidence 666555 5899999999999999999999999999999999987642 3469999999999987665544
No 21
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=2.5e-25 Score=169.17 Aligned_cols=198 Identities=17% Similarity=0.223 Sum_probs=138.9
Q ss_pred CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhh-----hccCCCChH---
Q 035566 2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK-----AVGYDFDND--- 73 (238)
Q Consensus 2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--- 73 (238)
+++++|+||+||||+++.+.+..++.. +.+++|.+......+.. ..|.....+. ..+.....+
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~ 74 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVNA-----ALAALGLPPAGEERVRT----WVGNGADVLVERALTWAGREPDEELLE 74 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----HhCccHHHHHHHHHhhccCCccHHHHH
Confidence 468999999999999965554444442 45567765433222221 1121111111 001111211
Q ss_pred ----hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCC
Q 035566 74 ----DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTG 146 (238)
Q Consensus 74 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~ 146 (238)
.+...+..... ....++||+.++|+.++.+ .+++||+....+..+++++|+..+|+.+++.+.....||
T Consensus 75 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp--- 150 (226)
T PRK13222 75 KLRELFDRHYAENVA-GGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKP--- 150 (226)
T ss_pred HHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCc---
Confidence 22222222221 2467899999999988754 579999999999999999999999999988887776665
Q ss_pred chHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------CccccccccChhHHHHHhHH
Q 035566 147 QELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------TKGADYALENIHNIREAFPE 213 (238)
Q Consensus 147 ~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------~~~ad~v~~~~~el~~~l~~ 213 (238)
.+.++. ++++++++|+++++|||+.+|+++|+++|++++++.++.. ...++++++++.+|..++..
T Consensus 151 -~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 151 -DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred -ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence 555555 5899999999999999999999999999999999987653 34688999999999887754
No 22
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.93 E-value=1.5e-25 Score=168.75 Aligned_cols=195 Identities=22% Similarity=0.294 Sum_probs=133.7
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccch----hhhhhccCC---CChHhH
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSM----AGLKAVGYD---FDNDDY 75 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~ 75 (238)
++++|+|||||||+|+......+|.+ +++++|++..... ....+|... ..+...... ......
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDEE-----IRELHGGGIARIIDLLRKLAAGEDPADLAEL 70 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence 37999999999999975545555553 5666887754321 111122111 111111111 111111
Q ss_pred HHhhh--CCCCCCCCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHH
Q 035566 76 HSFVH--GRLPYENLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ 150 (238)
Q Consensus 76 ~~~~~--~~~~~~~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~ 150 (238)
..... ........+++||+.++|+.|+. ..++.|++++..+...++.+|+.++|+.+++++++...|| .|+
T Consensus 71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP----~Pd 146 (221)
T COG0637 71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKP----APD 146 (221)
T ss_pred HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCC----CCH
Confidence 11111 11223467899999999999984 4678888888899999999999999999999988888876 777
Q ss_pred HHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--------CccccccccChhHHHHHh
Q 035566 151 LISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNIREAF 211 (238)
Q Consensus 151 ~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el~~~l 211 (238)
+|.. ++++|++|++|++|+|+++++++|+++||.+++++.+.. ...++.+..++.++...+
T Consensus 147 ~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 216 (221)
T COG0637 147 IYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPALL 216 (221)
T ss_pred HHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhccHHHHHHHH
Confidence 7776 899999999999999999999999999999999987443 223444555555554433
No 23
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.93 E-value=8.1e-25 Score=166.15 Aligned_cols=198 Identities=23% Similarity=0.287 Sum_probs=135.4
Q ss_pred eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHH--HHHH---HHHHHhh--c-cchhh---------hhhc
Q 035566 4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEV--SEFN---RVLYKNY--G-TSMAG---------LKAV 66 (238)
Q Consensus 4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~---~~~~~~~--~-~~~~~---------~~~~ 66 (238)
+|+|+||+||||+|+.......+.+ +.+..|++.... ..+. ...+..+ + ..... ....
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRL-----LFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY 75 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHH-----HHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 5899999999999976655544543 444566653211 1111 1111111 1 01010 1111
Q ss_pred cCCCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCC
Q 035566 67 GYDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKT 144 (238)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~ 144 (238)
+.....+.+...+.+... ....++||+.++|+.++.+ .+++||+....+...++.+++..+|+.++++++.+..||
T Consensus 76 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP- 153 (224)
T TIGR02254 76 NTEADEALLNQKYLRFLE-EGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKP- 153 (224)
T ss_pred CCCCcHHHHHHHHHHHHh-ccCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCC-
Confidence 111111122222222111 2357899999999888744 689999999999999999999999999999988887776
Q ss_pred CCchHHHHHH-HHhc-CCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHh
Q 035566 145 TGQELQLISM-LRMV-AHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAF 211 (238)
Q Consensus 145 ~~~~~~~~~~-~~~~-~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l 211 (238)
.+.++.. ++++ |++|+++++|||+. +|+.+|+++|+++++++++.. ...+++++.++.||..++
T Consensus 154 ---~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 154 ---DKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred ---CHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence 7776665 8999 99999999999998 799999999999999977532 346789999999988754
No 24
>PRK09449 dUMP phosphatase; Provisional
Probab=99.93 E-value=9.4e-25 Score=165.74 Aligned_cols=121 Identities=20% Similarity=0.257 Sum_probs=103.0
Q ss_pred CCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCC-C
Q 035566 87 NLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHH-F 162 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~-~ 162 (238)
..+++||+.++|+.|+.. .+++||+....+...++++|+.++|+.++++++.+..|| .+.++.. ++++|+. +
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP----~p~~~~~~~~~~~~~~~ 168 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKP----DVAIFDYALEQMGNPDR 168 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCC----CHHHHHHHHHHcCCCCc
Confidence 367899999999999733 579999999999999999999999999999998888876 7777775 8999975 5
Q ss_pred CeEEEEeCCc-cchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHh
Q 035566 163 FQRLFFDDST-RNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAF 211 (238)
Q Consensus 163 ~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l 211 (238)
++|++|||+. +|+.+|+++|+.+++++++.. ...+++++.++.||.+++
T Consensus 169 ~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l 222 (224)
T PRK09449 169 SRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLL 222 (224)
T ss_pred ccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence 8999999998 699999999999999975331 235889999999998765
No 25
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.93 E-value=3.3e-25 Score=168.85 Aligned_cols=123 Identities=23% Similarity=0.352 Sum_probs=109.9
Q ss_pred CCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCC
Q 035566 87 NLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFF 163 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~ 163 (238)
.++++|++.+.|+.++.+ ++++||+....+...++.+|+.++||.+++++..+..|| .+.+|+. ++++|++|+
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP----~~~~f~~~~~~~g~~p~ 172 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKP----DPEIFEYALEKLGVPPE 172 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCC----CcHHHHHHHHHcCCCcc
Confidence 478899999999999877 899999999999999999999999999999999998887 8888886 899999999
Q ss_pred eEEEEeCCccc-hhHHHhcCCeEEEecCCCCC-----ccccccccChhHHHHHhHH
Q 035566 164 QRLFFDDSTRN-IECGKSIGLHTVLVGTSRRT-----KGADYALENIHNIREAFPE 213 (238)
Q Consensus 164 ~~v~vgD~~~d-i~~a~~~G~~~i~v~~~~~~-----~~ad~v~~~~~el~~~l~~ 213 (238)
++++|||+..+ +.+|+.+||++|+++.+... ..+++.+.++.++.+++..
T Consensus 173 ~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 173 EALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred eEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHhh
Confidence 99999999866 69999999999999886532 4688899999999887653
No 26
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.92 E-value=5.7e-25 Score=162.55 Aligned_cols=173 Identities=16% Similarity=0.255 Sum_probs=118.8
Q ss_pred CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhh----hhh-ccCCCChHhHH
Q 035566 2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG----LKA-VGYDFDNDDYH 76 (238)
Q Consensus 2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~ 76 (238)
.++++|+||+||||+|+...+..++.+ +.+++|.+.... .+ ....|..... +.. .+.....+.+.
T Consensus 3 ~~~~~viFD~DGTLiDs~~~~~~a~~~-----~~~~~g~~~~~~-~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (188)
T PRK10725 3 DRYAGLIFDMDGTILDTEPTHRKAWRE-----VLGRYGLQFDEQ-AM----VALNGSPTWRIAQAIIELNQADLDPHALA 72 (188)
T ss_pred CcceEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCHH-HH----HHhcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence 357999999999999976655555553 445577653221 11 1112221111 111 11122222222
Q ss_pred Hh---hhCCCCCCCCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHH
Q 035566 77 SF---VHGRLPYENLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQL 151 (238)
Q Consensus 77 ~~---~~~~~~~~~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~ 151 (238)
.. ...........++|+ .++|..++. +.+|+||+....++..++++|+..+|+.++++++....|| .+.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP----~p~~ 147 (188)
T PRK10725 73 REKTEAVKSMLLDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKP----APDT 147 (188)
T ss_pred HHHHHHHHHHHhccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCC----ChHH
Confidence 21 111111234567776 578877763 4789999999999999999999999999999998887776 7776
Q ss_pred HHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEec
Q 035566 152 ISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVG 189 (238)
Q Consensus 152 ~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~ 189 (238)
+.. ++++|++|++|++|||+..|+++|+++|+++|++.
T Consensus 148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 665 89999999999999999999999999999999875
No 27
>PLN02940 riboflavin kinase
Probab=99.92 E-value=7.7e-25 Score=177.17 Aligned_cols=191 Identities=17% Similarity=0.242 Sum_probs=136.5
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-----hhccCCCChHhHHH
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-----KAVGYDFDNDDYHS 77 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 77 (238)
++++|+||+||||+|+...+..++.. +.+++|.+..... +....|...... ...+.....+++..
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~~-----~~~~~G~~~~~~~-----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLKA-----FLVKYGKQWDGRE-----AQKIVGKTPLEAAATVVEDYGLPCSTDEFNS 79 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence 37899999999999976655555543 5566776543211 112223222211 11122222232222
Q ss_pred ----hhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHH-hcCcccccceeeecccCCCCCCCCCchH
Q 035566 78 ----FVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLR-KLGLEDCFDGIVNFESLNPTNKTTGQEL 149 (238)
Q Consensus 78 ----~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~-~~~~~~~f~~i~~~~~~~~~k~~~~~~~ 149 (238)
.+... .....++||+.++|+.|+.+ .+|+||+....+...++ +.|+.++|+.++++++....|| .+
T Consensus 80 ~~~~~~~~~--~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP----~p 153 (382)
T PLN02940 80 EITPLLSEQ--WCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKP----SP 153 (382)
T ss_pred HHHHHHHHH--HccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCC----CH
Confidence 12111 13467899999999999755 67999999998888887 7899999999999998887776 66
Q ss_pred HHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHH
Q 035566 150 QLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIRE 209 (238)
Q Consensus 150 ~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~ 209 (238)
.++. +++++|++|++|++|||+..|+++|+++|+.+|++.++.. ...++++++++.|+..
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~ 218 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQP 218 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCH
Confidence 6666 4899999999999999999999999999999999987642 4568899999998753
No 28
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.92 E-value=7.1e-24 Score=161.97 Aligned_cols=116 Identities=10% Similarity=0.153 Sum_probs=97.1
Q ss_pred CCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCC
Q 035566 87 NLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFF 163 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~ 163 (238)
.+.++||+.++|+.|+.+ .+++||++.. ++..|+..+|+.+++++..+..|| .+.++.. ++++|++|+
T Consensus 111 ~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP----~p~~~~~a~~~~~~~~~ 181 (238)
T PRK10748 111 RIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKP----FSDMYHLAAEKLNVPIG 181 (238)
T ss_pred cCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCC----cHHHHHHHHHHcCCChh
Confidence 367889999999999754 6799998764 478899999999999988887776 7777775 889999999
Q ss_pred eEEEEeCC-ccchhHHHhcCCeEEEecCCCC--------CccccccccChhHHHHHh
Q 035566 164 QRLFFDDS-TRNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNIREAF 211 (238)
Q Consensus 164 ~~v~vgD~-~~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el~~~l 211 (238)
+|++|||+ ..|+.+|+++|+.+++++++.. ...+++.+.++.||.+++
T Consensus 182 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 182 EILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred HEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence 99999999 5999999999999999977542 135788899999988754
No 29
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.91 E-value=1.2e-23 Score=174.92 Aligned_cols=201 Identities=12% Similarity=0.158 Sum_probs=134.0
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHh-CCChhHHHHHHHHHHHhhccchhhhhh-cc--CCCC-hHh---
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKL-GIEESEVSEFNRVLYKNYGTSMAGLKA-VG--YDFD-NDD--- 74 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~-~~~--- 74 (238)
++++|+||+||||+|+.+.+...+.+.+.++..... +.... .. .+....|........ .. .... .+.
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~-~~----~~~~~~G~~~~~~~~~l~~~~~~~~~~~~~~ 314 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTP-ID----KYREIMGVPLPKVWEALLPDHSLEIREQTDA 314 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCC-HH----HHHHHcCCChHHHHHHHhhhcchhHHHHHHH
Confidence 368999999999999877777878776655321111 11111 11 122223333222211 00 0100 111
Q ss_pred -HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHH
Q 035566 75 -YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQ 150 (238)
Q Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~ 150 (238)
+.+.+.+.+.....+++||+.++|+.|+.+ .+|+||+....+...++++|+..+|+.++++++... +| +| ..
T Consensus 315 ~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~-~~--kP-~~ 390 (459)
T PRK06698 315 YFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINS-LN--KS-DL 390 (459)
T ss_pred HHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCC-CC--Cc-HH
Confidence 222222222223468899999999988654 679999999999999999999999999998876632 33 22 23
Q ss_pred HHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHhHHh
Q 035566 151 LISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAFPEL 214 (238)
Q Consensus 151 ~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l~~~ 214 (238)
+...++++ +|++|++|||+.+|+.+|+++|+.+|++.++.. ...+++++.++.||.+++..+
T Consensus 391 ~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 391 VKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILSTV 456 (459)
T ss_pred HHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHHH
Confidence 33346665 568999999999999999999999999977642 346899999999998877543
No 30
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.91 E-value=1.4e-23 Score=163.96 Aligned_cols=118 Identities=14% Similarity=0.185 Sum_probs=94.5
Q ss_pred CCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCccccc---ceeeecccCCCCCCCCCchHHHHH-HHHhcC
Q 035566 87 NLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCF---DGIVNFESLNPTNKTTGQELQLIS-MLRMVA 159 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f---~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~ 159 (238)
.++++||+.++|+.++. +.+|+||+....+..+++.++...+| +.+ ++++....|| .+.++. +++++|
T Consensus 142 ~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP----~p~~~~~a~~~~~ 216 (286)
T PLN02779 142 ALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKP----DPDIYNLAAETLG 216 (286)
T ss_pred CCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCC----CHHHHHHHHHHhC
Confidence 35889999999988864 46799999999998888876433444 334 5565555555 777666 489999
Q ss_pred CCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHH
Q 035566 160 HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIRE 209 (238)
Q Consensus 160 ~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~ 209 (238)
++|++|++|||+.+|+++|+++|+++|++.++.. ...++++++++.++..
T Consensus 217 ~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~ 270 (286)
T PLN02779 217 VDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPL 270 (286)
T ss_pred cChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcch
Confidence 9999999999999999999999999999977643 3468999999999764
No 31
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.90 E-value=2.9e-23 Score=153.02 Aligned_cols=169 Identities=18% Similarity=0.287 Sum_probs=114.1
Q ss_pred eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhh-----hccCCCChHhH---
Q 035566 4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK-----AVGYDFDNDDY--- 75 (238)
Q Consensus 4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--- 75 (238)
+++|+||+||||+|+......++.+ +.+++|.+... .. .....|....... ..+...+.+..
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~--~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKH-----LADKYGIEFDK--QY---NTSLGGLSREDILRAILKLRKPGLSLETIHQL 70 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHH-----HHHHcCCCCCH--HH---HHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 5789999999999976544444443 45566765321 11 1111222211111 11112222211
Q ss_pred ----HHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCch
Q 035566 76 ----HSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQE 148 (238)
Q Consensus 76 ----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~ 148 (238)
.+.+.+.+......++||+.++|+.|+.+ .+++||+ ..++.+++++|+..+|+.+++++..+..|| .
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp----~ 144 (185)
T TIGR02009 71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKP----H 144 (185)
T ss_pred HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCC----C
Confidence 11122112123478899999999988654 4688877 668889999999999999999887777765 6
Q ss_pred HHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEe
Q 035566 149 LQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLV 188 (238)
Q Consensus 149 ~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v 188 (238)
+.++.. ++++|++|+++++|||+..|+++|+++|+++++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 666664 8999999999999999999999999999999875
No 32
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.90 E-value=3.9e-23 Score=153.95 Aligned_cols=102 Identities=22% Similarity=0.335 Sum_probs=91.9
Q ss_pred CCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566 87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF 162 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~ 162 (238)
.++++||+.++|+.|+.+ .+++||++...+...++++|+..+|+.++++++.+..|| .+.+|.. ++++|++|
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP----~~~~~~~~~~~~~~~p 165 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKP----APQVYQLALEALGVPP 165 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCC----CHHHHHHHHHHhCCCh
Confidence 357899999999999765 579999999999999999999999999999998888876 6777775 89999999
Q ss_pred CeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
+++++|||+.+|+.+|+++|+++|+++++.
T Consensus 166 ~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 166 DEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred hhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 999999999999999999999999998765
No 33
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.89 E-value=2.5e-22 Score=150.18 Aligned_cols=96 Identities=22% Similarity=0.248 Sum_probs=82.8
Q ss_pred CCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566 87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF 162 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~ 162 (238)
...++||+.++|+.|+.+ .+|+||++.. ....++++|+..+|+.+++++..+..|| .+.++.. ++++|++|
T Consensus 103 ~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP----~~~~~~~~~~~~~~~~ 177 (203)
T TIGR02252 103 PWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKP----DPKIFQEALERAGISP 177 (203)
T ss_pred cceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCC----CHHHHHHHHHHcCCCh
Confidence 357899999999998754 5799998764 5788999999999999999988888776 6777764 89999999
Q ss_pred CeEEEEeCCc-cchhHHHhcCCeEEE
Q 035566 163 FQRLFFDDST-RNIECGKSIGLHTVL 187 (238)
Q Consensus 163 ~~~v~vgD~~-~di~~a~~~G~~~i~ 187 (238)
+++++|||+. +|+.+|+++|+++|+
T Consensus 178 ~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 178 EEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred hHEEEECCCchHHHHHHHHcCCeeeC
Confidence 9999999998 899999999999874
No 34
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.89 E-value=6.5e-23 Score=151.18 Aligned_cols=168 Identities=22% Similarity=0.259 Sum_probs=112.0
Q ss_pred EEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhh-----hhccCCCChHhH---H-
Q 035566 6 CLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGL-----KAVGYDFDNDDY---H- 76 (238)
Q Consensus 6 ~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~- 76 (238)
+|+||+||||+|+...+..++.+ +.+.+|++..... ... ..|...... ...+...+.+.. .
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~--~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKA-----LADELGIPFDEEF--NES---LKGVSREDSLERILDLGGKKYSEEEKEELAE 70 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHHH--HHH---hcCCChHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 48999999999976655555543 5566676643210 001 112111111 111222222111 1
Q ss_pred ---HhhhCCCC-CCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchH
Q 035566 77 ---SFVHGRLP-YENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQEL 149 (238)
Q Consensus 77 ---~~~~~~~~-~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~ 149 (238)
..+..... .....++||+.++|+.|+.+ .+++||+.. ....++++|+..+|+.++++++.+..|| .+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp----~p 144 (185)
T TIGR01990 71 RKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGKP----DP 144 (185)
T ss_pred HHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCCC----Ch
Confidence 11111110 12347899999999999755 568887643 4578999999999999999888877776 77
Q ss_pred HHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEec
Q 035566 150 QLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVG 189 (238)
Q Consensus 150 ~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~ 189 (238)
.++.. +++++++|+++++|||+.+|+++|+++|+++|+|+
T Consensus 145 ~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 145 EIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 77665 89999999999999999999999999999999874
No 35
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.89 E-value=1.3e-23 Score=153.40 Aligned_cols=172 Identities=26% Similarity=0.422 Sum_probs=115.3
Q ss_pred EEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhhCCCCCC
Q 035566 7 LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPYE 86 (238)
Q Consensus 7 vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (238)
|+||+||||+++...+...+. ..+.+.++.+.. ...+...+..........+... .........+.+.+.....
T Consensus 1 iifD~dgtL~d~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 74 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQ----RLALEEFGLEIS-AEELRELFGKSYEEALERLLER-FGIDPEEIQELFREYNLES 74 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHH----HHHHHHTTHHHH-HHHHHHHTTSHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHG
T ss_pred cEEECCCCcEeCHHHHHHHHH----HHHHHHhCCCCC-HHHHHHHhCCCHHHHHHHhhhc-cchhHHHHHHHhhhhhhhh
Confidence 799999999996553444444 334555555422 1222111111111011111100 0000112222222111114
Q ss_pred CCCCChhHHHHHhcCC---CCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566 87 NLKPDPVLRNLLLSLP---IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF 162 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~ 162 (238)
..+++||+.++|+.++ .+.+++||++...+...++++|+..+|+.++++++.+..|| .+.++.. ++++|++|
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp----~~~~~~~~~~~~~~~p 150 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKP----DPDAYRRALEKLGIPP 150 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTT----SHHHHHHHHHHHTSSG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhh----HHHHHHHHHHHcCCCc
Confidence 4688999999999987 33689999999999999999999999999999998888876 6666664 89999999
Q ss_pred CeEEEEeCCccchhHHHhcCCeEEEe
Q 035566 163 FQRLFFDDSTRNIECGKSIGLHTVLV 188 (238)
Q Consensus 163 ~~~v~vgD~~~di~~a~~~G~~~i~v 188 (238)
+++++|||+..|+.+|+.+|+.+|+|
T Consensus 151 ~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 151 EEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp GGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred ceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 99999999999999999999999986
No 36
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.88 E-value=4.3e-22 Score=178.60 Aligned_cols=192 Identities=19% Similarity=0.286 Sum_probs=136.6
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhh-----ccC-CCChH---
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKA-----VGY-DFDND--- 73 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~--- 73 (238)
++++|+|||||||+|+...+..++.+ +++++|++.... . +....|.....+.. .+. ..+.+
T Consensus 74 ~ikaVIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~it~e-~----~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~ 143 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNSEEPSRRAAVD-----VFAEMGVEVTVE-D----FVPFMGTGEANFLGGVASVKGVKGFDPDAAK 143 (1057)
T ss_pred CCCEEEECCCCCeEeChHHHHHHHHH-----HHHHcCCCCCHH-H----HHHHhCCCHHHHHHHHHHhcCCCCCCHHHHH
Confidence 58999999999999976555555553 556677764321 1 11222322222110 011 11111
Q ss_pred -hHHHhhhCCCC-CCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcc-cccceeeecccCCCCCCCCCc
Q 035566 74 -DYHSFVHGRLP-YENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLE-DCFDGIVNFESLNPTNKTTGQ 147 (238)
Q Consensus 74 -~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~k~~~~~ 147 (238)
.+.+.+..... .....++||+.++|+.|+.+ .+|+||+....+...++++|+. .+|+.++++++....||
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP---- 219 (1057)
T PLN02919 144 KRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKP---- 219 (1057)
T ss_pred HHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCC----
Confidence 12222221111 11234789999999999765 5799999999999999999996 78999999988887776
Q ss_pred hHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHH
Q 035566 148 ELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIR 208 (238)
Q Consensus 148 ~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~ 208 (238)
.++++.. ++++|++|++|++|||+..|+++|+++||++|++.++.. ..+++++++++.++.
T Consensus 220 ~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~ 286 (1057)
T PLN02919 220 APDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNIS 286 (1057)
T ss_pred CHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCC
Confidence 7777765 899999999999999999999999999999999988753 457899999999964
No 37
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.88 E-value=7.4e-22 Score=146.90 Aligned_cols=180 Identities=15% Similarity=0.096 Sum_probs=114.3
Q ss_pred eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchh-hhhhccCCCCh---HhHHHhh
Q 035566 4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMA-GLKAVGYDFDN---DDYHSFV 79 (238)
Q Consensus 4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~ 79 (238)
+|+|+||+||||+|+.. .+. .+.++.|++.... . ...+.... .+.. ....+. .++.+.+
T Consensus 2 ~k~viFDlDGTLiD~~~----~~~-----~~~~~~g~~~~~~---~----~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~ 64 (197)
T PHA02597 2 KPTILTDVDGVLLSWQS----GLP-----YFAQKYNIPTDHI---L----KMIQDERFRDPGE-LFGCDQELAKKLIEKY 64 (197)
T ss_pred CcEEEEecCCceEchhh----ccH-----HHHHhcCCCHHHH---H----HHHhHhhhcCHHH-HhcccHHHHHHHhhhh
Confidence 79999999999999432 222 3556677764321 1 11111100 0000 011111 1111111
Q ss_pred hCCCCCCCCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCccccc----ceeeecccCCCCCCCCCchHHHHH
Q 035566 80 HGRLPYENLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCF----DGIVNFESLNPTNKTTGQELQLIS 153 (238)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f----~~i~~~~~~~~~k~~~~~~~~~~~ 153 (238)
..........++||+.++|+.|+.. .+++||.........++.+++..+| +.+++++.. +| +++++.
T Consensus 65 ~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~---~~----kp~~~~ 137 (197)
T PHA02597 65 NNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD---ES----KEKLFI 137 (197)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC---cc----cHHHHH
Confidence 1111113457899999999999653 5677887666666677777776544 555555542 33 345555
Q ss_pred -HHHhcCCCCCeEEEEeCCccchhHHHhc--CCeEEEecCCCC--CccccccccChhHHHH
Q 035566 154 -MLRMVAHHFFQRLFFDDSTRNIECGKSI--GLHTVLVGTSRR--TKGADYALENIHNIRE 209 (238)
Q Consensus 154 -~~~~~~~~~~~~v~vgD~~~di~~a~~~--G~~~i~v~~~~~--~~~ad~v~~~~~el~~ 209 (238)
+++++| |++++||||+..|+.+|+++ |+++++++++.. .+.+++.+.++.|+..
T Consensus 138 ~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 138 KAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGERDHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred HHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhhccccchhhhhccHHHHhc
Confidence 589999 88899999999999999999 999999988874 3456788999988753
No 38
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.87 E-value=2e-22 Score=148.34 Aligned_cols=96 Identities=33% Similarity=0.488 Sum_probs=83.5
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCC
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFF 163 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~ 163 (238)
.+++||+.++|+.++.+ .+++||+.... .....++|+..+|+.+++++..+..|| .+.++.. ++++|++|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP----~~~~~~~~~~~~~~~~~ 158 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKP----DPDIYLLALKKLGLKPE 158 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCC----CHHHHHHHHHHcCCCcc
Confidence 67899999999988654 67999998887 666667999999999998888877776 6666665 899999999
Q ss_pred eEEEEeCCccchhHHHhcCCeEEEe
Q 035566 164 QRLFFDDSTRNIECGKSIGLHTVLV 188 (238)
Q Consensus 164 ~~v~vgD~~~di~~a~~~G~~~i~v 188 (238)
++++|||+..|+.+|+++|+.+|++
T Consensus 159 ~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 159 ECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred eEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 9999999999999999999999875
No 39
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.87 E-value=3.4e-21 Score=145.75 Aligned_cols=121 Identities=17% Similarity=0.230 Sum_probs=87.9
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecc-------cCCCCCCCCCchHHHHH-HHH
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFE-------SLNPTNKTTGQELQLIS-MLR 156 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~-------~~~~~k~~~~~~~~~~~-~~~ 156 (238)
.+++||+.++|+.++.+ .+|+||+....+..+++.+|+..+|...+..+ ..+.... +++++.++. +++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVD-ASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccC-CcccHHHHHHHHH
Confidence 56889999999998754 57999999999999999999988775432211 1111111 122445555 589
Q ss_pred hcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-Ccccccccc--ChhHHHHH
Q 035566 157 MVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALE--NIHNIREA 210 (238)
Q Consensus 157 ~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~--~~~el~~~ 210 (238)
+++++|++|++|||+.+|+.+|+.+|+..+ ++.... ...|++++. ++.++..+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~-~~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGIA-FNAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeEE-eCCCHHHHHhchhccCCCCHHHHHhh
Confidence 999999999999999999999999999754 443332 567889977 45666543
No 40
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.86 E-value=1.6e-21 Score=146.62 Aligned_cols=101 Identities=17% Similarity=0.212 Sum_probs=83.2
Q ss_pred CCCCChhHHHHHhcCCCC---eEEEecCChHH--HHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCC
Q 035566 87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIH--VAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAH 160 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~--~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~ 160 (238)
..+++||+.++|+.|+.+ .+++||+.... ....+...++..+|+.+++++..+..|| .+.++.. ++++|+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP----~p~~~~~~~~~~g~ 167 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKP----DPRIYQLMLERLGV 167 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCC----CHHHHHHHHHHcCC
Confidence 467899999999998754 57999986543 3333445678889999998888877776 7777775 899999
Q ss_pred CCCeEEEEeCCccchhHHHhcCCeEEEecCC
Q 035566 161 HFFQRLFFDDSTRNIECGKSIGLHTVLVGTS 191 (238)
Q Consensus 161 ~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~ 191 (238)
+|++|++|||+..|+.+|+++|+++|++.++
T Consensus 168 ~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 168 APEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred CHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 9999999999999999999999999998764
No 41
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.84 E-value=4.2e-20 Score=137.58 Aligned_cols=101 Identities=21% Similarity=0.326 Sum_probs=86.4
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHh-cCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRK-LGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF 162 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~ 162 (238)
..++||+.++|+.++.+ .+|+||++.......+.. .++..+|+.++++++.+..|| ++.+|.. ++++|++|
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP----~p~~~~~~~~~~~~~p 158 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKP----EARIYQHVLQAEGFSA 158 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCC----CHHHHHHHHHHcCCCh
Confidence 35789999999998654 689999987776655544 478889999999999988886 7877775 89999999
Q ss_pred CeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
++|++|||+..|+.+|+++|++++++..+.
T Consensus 159 ~~~l~vgD~~~di~aA~~aG~~~i~~~~~~ 188 (199)
T PRK09456 159 ADAVFFDDNADNIEAANALGITSILVTDKQ 188 (199)
T ss_pred hHeEEeCCCHHHHHHHHHcCCEEEEecCCc
Confidence 999999999999999999999999997754
No 42
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.83 E-value=9.4e-20 Score=135.53 Aligned_cols=88 Identities=17% Similarity=0.177 Sum_probs=73.2
Q ss_pred CCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCCe
Q 035566 89 KPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFFQ 164 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~ 164 (238)
.+.++..++|+.|+. +.+|+||++...+..+++++|+..+|+.++++++... || ++..+. +++++|++|++
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-KP----~p~~~~~~~~~~~~~~~~ 180 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP-KP----NPEPLILAAKALGVEACH 180 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC-Cc----CHHHHHHHHHHhCcCccc
Confidence 344455777777754 4689999999999999999999999999998887665 65 565555 58999999999
Q ss_pred EEEEeCCccchhHHHhc
Q 035566 165 RLFFDDSTRNIECGKSI 181 (238)
Q Consensus 165 ~v~vgD~~~di~~a~~~ 181 (238)
|++|||+.+|+.+|+++
T Consensus 181 ~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 181 AAMVGDTVDDIITGRKA 197 (197)
T ss_pred EEEEeCCHHHHHHHHhC
Confidence 99999999999999874
No 43
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.82 E-value=1.7e-19 Score=128.98 Aligned_cols=150 Identities=22% Similarity=0.262 Sum_probs=102.3
Q ss_pred EEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhhCCCCC
Q 035566 6 CLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLPY 85 (238)
Q Consensus 6 ~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (238)
+|+||+||||+|+...+..++.+ ..++++.+... +....|.....+... ...+.+.. . ..
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~-------~~~~~g~~~~~~~~~-----~~~~~~~~-~--~~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEE-----TLEEFGEDFQA-------LKALRGLAEELLYRI-----ATSFEELL-G--YD 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHH-----HHHHhcccHHH-------HHHHHccChHHHHHH-----HHHHHHHh-C--cc
Confidence 48999999999976666666664 33445543222 111122221111110 01122211 1 11
Q ss_pred CCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCC
Q 035566 86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHH 161 (238)
Q Consensus 86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~ 161 (238)
.....+||+.++|+.|+.+ .+++||+....+...++++ +..+|+.+++.++.. .|| .+.++. +++++|++
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~Kp----~~~~~~~~~~~~~~~ 134 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-AKP----EPEIFLAALESLGLP 134 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-CCc----CHHHHHHHHHHcCCC
Confidence 2345679999999988543 6799999999999999987 788899988877766 665 566665 58999999
Q ss_pred CCeEEEEeCCccchhHHHhcC
Q 035566 162 FFQRLFFDDSTRNIECGKSIG 182 (238)
Q Consensus 162 ~~~~v~vgD~~~di~~a~~~G 182 (238)
| +|++|||+..|+.+|+++|
T Consensus 135 ~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 135 P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred C-CEEEEeCCHHHHHHHHHcc
Confidence 9 9999999999999999987
No 44
>PRK06769 hypothetical protein; Validated
Probab=99.82 E-value=8.2e-20 Score=132.53 Aligned_cols=120 Identities=16% Similarity=0.166 Sum_probs=89.0
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChH--------HHHHHHHhcCcccccceee-ecccCCCCCCCCCchHHHHHH-
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEI--------HVAKVLRKLGLEDCFDGIV-NFESLNPTNKTTGQELQLISM- 154 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~--------~~~~~l~~~~~~~~f~~i~-~~~~~~~~k~~~~~~~~~~~~- 154 (238)
+.++||+.++|+.|+.+ .+|+||+... .....++.+|+..+|.... ..+.....|| .+.++..
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP----~p~~~~~~ 102 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKP----STGMLLQA 102 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCC----CHHHHHHH
Confidence 35679999999988654 6799997641 2344466777655443332 2333445555 7766664
Q ss_pred HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC------------CccccccccChhHHHHHh
Q 035566 155 LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR------------TKGADYALENIHNIREAF 211 (238)
Q Consensus 155 ~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~------------~~~ad~v~~~~~el~~~l 211 (238)
+++++++|++|++|||+..|+.+|+++|+.+|++.++.. ...+++++.++.||.+++
T Consensus 103 ~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 103 AEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred HHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 899999999999999999999999999999999987642 235889999999998754
No 45
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.82 E-value=4.1e-20 Score=135.01 Aligned_cols=87 Identities=18% Similarity=0.213 Sum_probs=78.0
Q ss_pred CCCCChhHHHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCCeE
Q 035566 87 NLKPDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFFQR 165 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~~ 165 (238)
.++++||+.++|+ +.+|+||++...+...++++|+..+|+.+++++..+..|| .+.+|.. ++++|++|++|
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP----~p~~f~~~~~~~~~~p~~~ 159 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKP----DPVVYELVFDTVGLPPDRV 159 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCC----CHHHHHHHHHHHCCCHHHe
Confidence 4678999999999 3689999999999999999999999999999888888876 7877775 89999999999
Q ss_pred EEEeCCccchhHHHhc
Q 035566 166 LFFDDSTRNIECGKSI 181 (238)
Q Consensus 166 v~vgD~~~di~~a~~~ 181 (238)
++|||+..|+.+|+++
T Consensus 160 l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 160 LMVAAHQWDLIGARKF 175 (175)
T ss_pred EeEecChhhHHHHhcC
Confidence 9999999999999863
No 46
>PLN02811 hydrolase
Probab=99.81 E-value=9.5e-20 Score=137.75 Aligned_cols=118 Identities=19% Similarity=0.238 Sum_probs=94.5
Q ss_pred CCCCChhHHHHHhcCCCC---eEEEecCChHHHHH-HHHhcCcccccceeeecc--cCCCCCCCCCchHHHHHH-HHhcC
Q 035566 87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAK-VLRKLGLEDCFDGIVNFE--SLNPTNKTTGQELQLISM-LRMVA 159 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~-~l~~~~~~~~f~~i~~~~--~~~~~k~~~~~~~~~~~~-~~~~~ 159 (238)
...++||+.++|+.|+.. .+|+||+....... ..+..++.++|+.+++++ +....|| .+.++.. +++++
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP----~p~~~~~a~~~~~ 151 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKP----APDIFLAAARRFE 151 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCC----CcHHHHHHHHHhC
Confidence 467899999999988654 57999987765543 344457888999999888 6666665 7777775 78886
Q ss_pred ---CCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHH
Q 035566 160 ---HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIR 208 (238)
Q Consensus 160 ---~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~ 208 (238)
++|++|++|||+..|+++|+++|+++|++.++.. ...++++++++.|+.
T Consensus 152 ~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~ 207 (220)
T PLN02811 152 DGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK 207 (220)
T ss_pred CCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence 9999999999999999999999999999977642 346788888888754
No 47
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.81 E-value=6.5e-19 Score=129.16 Aligned_cols=119 Identities=18% Similarity=0.223 Sum_probs=90.8
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCCh---------------HHHHHHHHhcCcccccceeeecc-----cCCCCCCC
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADE---------------IHVAKVLRKLGLEDCFDGIVNFE-----SLNPTNKT 144 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~---------------~~~~~~l~~~~~~~~f~~i~~~~-----~~~~~k~~ 144 (238)
+.++||+.++|+.|+.+ .+|+||+.. ..+...++++|+ .|+.++.+. .....||
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP- 104 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKP- 104 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCC-
Confidence 45679999999988755 579998762 334456667776 377766543 2344554
Q ss_pred CCchHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----Cccc--cccccChhHHHHHhH
Q 035566 145 TGQELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGA--DYALENIHNIREAFP 212 (238)
Q Consensus 145 ~~~~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~a--d~v~~~~~el~~~l~ 212 (238)
.+.++.. ++.+|++|+++++|||+.+|+.+|+++|+.++++.++.. ...+ ++++.++.++.+++.
T Consensus 105 ---~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 105 ---KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred ---CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 7777765 899999999999999999999999999999999977642 3345 899999999988764
No 48
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.81 E-value=4.5e-19 Score=132.78 Aligned_cols=190 Identities=14% Similarity=0.103 Sum_probs=116.3
Q ss_pred eeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHH--HHHHHhhccchhhhhhccCCCChHhHHHhhhC
Q 035566 4 YECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFN--RVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHG 81 (238)
Q Consensus 4 ~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (238)
|++|+|||||||++ ..+. .+.+.+|.+.... ... ..+...++.....+. ....+.+++....
T Consensus 1 ~~~v~FD~DGTL~~------~~~~-----~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~i~~~~-- 64 (205)
T PRK13582 1 MEIVCLDLEGVLVP------EIWI-----AFAEKTGIPELRA-TTRDIPDYDVLMKQRLDILD--EHGLGLADIQEVI-- 64 (205)
T ss_pred CeEEEEeCCCCChh------hHHH-----HHHHHcCChHHHH-HhcCCCCHHHHHHHHHHHHH--HcCCCHHHHHHHH--
Confidence 48899999999994 2222 2445566643210 000 001111111111111 1223344444333
Q ss_pred CCCCCCCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccC----CCCCCCCCchHHHHHHH
Q 035566 82 RLPYENLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL----NPTNKTTGQELQLISML 155 (238)
Q Consensus 82 ~~~~~~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~----~~~k~~~~~~~~~~~~~ 155 (238)
...+++||+.++|+.++. +.+++|++....+...++++|+..+|...+..... +..++.+.+. ...+
T Consensus 65 ----~~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k---~~~l 137 (205)
T PRK13582 65 ----ATLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGK---RQAV 137 (205)
T ss_pred ----HhCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchH---HHHH
Confidence 235778999999998864 46799999999999999999998888654433211 1111111112 2334
Q ss_pred HhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Cccccc-cccChhHHHHHhHHhhhc
Q 035566 156 RMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADY-ALENIHNIREAFPELWDA 217 (238)
Q Consensus 156 ~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~-v~~~~~el~~~l~~~~~~ 217 (238)
++++..++++++|||+.+|+.+++.+|+.. .++.+.. ...+++ +++++.||..++.+...+
T Consensus 138 ~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v-~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 201 (205)
T PRK13582 138 KALKSLGYRVIAAGDSYNDTTMLGEADAGI-LFRPPANVIAEFPQFPAVHTYDELLAAIDKASAR 201 (205)
T ss_pred HHHHHhCCeEEEEeCCHHHHHHHHhCCCCE-EECCCHHHHHhCCcccccCCHHHHHHHHHHHHhh
Confidence 556666789999999999999999999854 4554432 234555 899999999888776543
No 49
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.81 E-value=8.7e-19 Score=130.84 Aligned_cols=105 Identities=12% Similarity=0.090 Sum_probs=81.0
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCC------Cch-HHHHHHHHh
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTT------GQE-LQLISMLRM 157 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~------~~~-~~~~~~~~~ 157 (238)
.+++||+.++|+.++.+ .+|+|++....+..+++++|+..+|...+.++..+..+|.+ .++ ..+..++++
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~ 158 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRE 158 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHH
Confidence 57889999999998654 57999999999999999999988877666554444333321 122 234455788
Q ss_pred cCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 158 VAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 158 ~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
+|++++++++|||+.+|+.+++.+|+.++..+.+.
T Consensus 159 ~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 159 LNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred hCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 99999999999999999999999999766655444
No 50
>PLN02954 phosphoserine phosphatase
Probab=99.79 E-value=8.1e-18 Score=127.70 Aligned_cols=192 Identities=17% Similarity=0.232 Sum_probs=112.2
Q ss_pred CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhh-hhh-cc-CCCChHhHHHh
Q 035566 2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAG-LKA-VG-YDFDNDDYHSF 78 (238)
Q Consensus 2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~ 78 (238)
+++|+|+||+||||+++ .. +. .+.+.+|.+.... .+...+.. ....... +.. .. .....+.+.+.
T Consensus 10 ~~~k~viFDfDGTL~~~-~~----~~-----~~~~~~g~~~~~~-~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (224)
T PLN02954 10 RSADAVCFDVDSTVCVD-EG----ID-----ELAEFCGAGEAVA-EWTAKAMG-GSVPFEEALAARLSLFKPSLSQVEEF 77 (224)
T ss_pred ccCCEEEEeCCCcccch-HH----HH-----HHHHHcCChHHHH-HHHHHHHC-CCCCHHHHHHHHHHHcCCCHHHHHHH
Confidence 35799999999999994 22 11 2555566542221 11111111 0011111 100 00 11123333333
Q ss_pred hhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcc--cccceeeecc--------cCCCCCCCC
Q 035566 79 VHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLE--DCFDGIVNFE--------SLNPTNKTT 145 (238)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~--~~f~~i~~~~--------~~~~~k~~~ 145 (238)
+.. ....++||+.++|+.++.+ .+|+|++....+..+++.+|+. .+|...+..+ .........
T Consensus 78 ~~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~ 153 (224)
T PLN02954 78 LEK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRS 153 (224)
T ss_pred HHH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCC
Confidence 322 1245789999999988654 5799999999999999999986 3554322111 110000111
Q ss_pred CchHH-HHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHHHHh
Q 035566 146 GQELQ-LISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIREAF 211 (238)
Q Consensus 146 ~~~~~-~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~~~l 211 (238)
++++. +..+++++|. +++++|||+.+|+.+++.+|+..+....+.. ...++++++++.+|.+++
T Consensus 154 ~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 154 GGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred ccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 22334 4445677775 6899999999999999998887654332211 345899999999987754
No 51
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.79 E-value=1.3e-18 Score=126.93 Aligned_cols=116 Identities=16% Similarity=0.204 Sum_probs=88.5
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCCh---------------HHHHHHHHhcCcccccceeeecc-----------cC
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADE---------------IHVAKVLRKLGLEDCFDGIVNFE-----------SL 138 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~---------------~~~~~~l~~~~~~~~f~~i~~~~-----------~~ 138 (238)
+.++||+.++|+.|+.+ .+++||++. ..+...+..+++. |+.++.+. ..
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~ 102 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVC 102 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCC
Confidence 45678999999998755 579999874 3444566666665 67766543 22
Q ss_pred CCCCCCCCchHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeE-EEecCCCC-----CccccccccChhHHHH
Q 035566 139 NPTNKTTGQELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHT-VLVGTSRR-----TKGADYALENIHNIRE 209 (238)
Q Consensus 139 ~~~k~~~~~~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~-i~v~~~~~-----~~~ad~v~~~~~el~~ 209 (238)
...| |.+.++.. ++++|++|++++||||+..|+++|+++|+.+ +++.++.. ...|+++++++.||.+
T Consensus 103 ~~~K----P~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~~ 176 (176)
T TIGR00213 103 DCRK----PKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLPQ 176 (176)
T ss_pred CCCC----CCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhhC
Confidence 2344 47777775 8999999999999999999999999999998 78887753 2458999999999853
No 52
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.78 E-value=1.7e-18 Score=128.21 Aligned_cols=191 Identities=16% Similarity=0.185 Sum_probs=131.6
Q ss_pred ceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhh-----hccCCCChHhHHH
Q 035566 3 KYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLK-----AVGYDFDNDDYHS 77 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 77 (238)
.+.+++||+||||+|++..+...+.. +..++|....... .....|....+.. ......+.+++..
T Consensus 9 ~~~~~lfD~dG~lvdte~~y~~~~~~-----~~~~ygk~~~~~~-----~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~ 78 (222)
T KOG2914|consen 9 KVSACLFDMDGTLVDTEDLYTEAWQE-----LLDRYGKPYPWDV-----KVKSMGKRTSEAARLFVKKLPDPVSREEFNK 78 (222)
T ss_pred ceeeEEEecCCcEEecHHHHHHHHHH-----HHHHcCCCChHHH-----HHHHcCCCHHHHHHHHHhhcCCCCCHHHHHH
Confidence 47899999999999976655555553 6667776433311 1112233222211 1123455555554
Q ss_pred hhhCCC--CCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcC-cccccceeee--cccCCCCCCCCCchH
Q 035566 78 FVHGRL--PYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLG-LEDCFDGIVN--FESLNPTNKTTGQEL 149 (238)
Q Consensus 78 ~~~~~~--~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~-~~~~f~~i~~--~~~~~~~k~~~~~~~ 149 (238)
...... ........||+.+++++|+.. .+++|++++.......++++ +-..|+.++. ...+... ||.+
T Consensus 79 e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~g----KP~P 154 (222)
T KOG2914|consen 79 EEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNG----KPDP 154 (222)
T ss_pred HHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCC----CCCc
Confidence 433221 113567889999999999765 57999999998888888877 6677877666 3334344 4588
Q ss_pred HHHHH-HHhcCCCC-CeEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHH
Q 035566 150 QLISM-LRMVAHHF-FQRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNI 207 (238)
Q Consensus 150 ~~~~~-~~~~~~~~-~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el 207 (238)
++|.. ++.+|.+| +.|++|+|++..+++|+++||++|+++.... ...++.+++++.+.
T Consensus 155 di~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~ 218 (222)
T KOG2914|consen 155 DIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDF 218 (222)
T ss_pred hHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceeccccccc
Confidence 88887 79999988 9999999999999999999999999988442 45566666665543
No 53
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.78 E-value=2.5e-18 Score=129.90 Aligned_cols=128 Identities=13% Similarity=0.107 Sum_probs=88.5
Q ss_pred CCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccc--cc--ceeeecccCCCCCCCCCch-------HHHH
Q 035566 87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLED--CF--DGIVNFESLNPTNKTTGQE-------LQLI 152 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~--~f--~~i~~~~~~~~~k~~~~~~-------~~~~ 152 (238)
..+++||+.++|+.++.+ .+|+|++....+..+++++ +.. .+ +..+..+.....+|.+... ..-.
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~ 150 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKP 150 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchH
Confidence 367899999999888654 5799999999999999987 543 22 2233333333333311100 0012
Q ss_pred HHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecC--CC--CCccccccccChhHHHHHhHHhhh
Q 035566 153 SMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGT--SR--RTKGADYALENIHNIREAFPELWD 216 (238)
Q Consensus 153 ~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~--~~--~~~~ad~v~~~~~el~~~l~~~~~ 216 (238)
.+++.++..++++++|||+.+|+.+|+.+|+..+ -.. .. ....+.+.++++.|+.+.+.+++.
T Consensus 151 ~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a-~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~~~ 217 (219)
T PRK09552 151 SLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA-RDFLITKCEELGIPYTPFETFHDVQTELKHLLE 217 (219)
T ss_pred HHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee-HHHHHHHHHHcCCCccccCCHHHHHHHHHHHhc
Confidence 3568888999999999999999999999999433 111 00 244577888999999998888765
No 54
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.77 E-value=6e-18 Score=125.67 Aligned_cols=101 Identities=23% Similarity=0.282 Sum_probs=86.9
Q ss_pred CCCCChhHHHHHhcCCCCe---EEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566 87 NLKPDPVLRNLLLSLPIRK---VIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF 162 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~~---~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~ 162 (238)
.....+++.++++.++.++ .++||.+. ..+.++..+|+..+||.++.+...+..|| .+.+|+. ++++++.|
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~-r~~~~l~~~~l~~~fD~vv~S~e~g~~KP----Dp~If~~al~~l~v~P 185 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDD-RLRLLLLPLGLSAYFDFVVESCEVGLEKP----DPRIFQLALERLGVKP 185 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcH-HHHHHhhccCHHHhhhhhhhhhhhccCCC----ChHHHHHHHHHhCCCh
Confidence 4566788889999998775 46777654 44588899999999999999999999997 9999997 89999999
Q ss_pred CeEEEEeCCc-cchhHHHhcCCeEEEecCCC
Q 035566 163 FQRLFFDDST-RNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 163 ~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~ 192 (238)
++|++|||+. ||+++|+++||++++|.++.
T Consensus 186 ee~vhIgD~l~nD~~gA~~~G~~ailv~~~~ 216 (237)
T KOG3085|consen 186 EECVHIGDLLENDYEGARNLGWHAILVDNSI 216 (237)
T ss_pred HHeEEecCccccccHhHHHcCCEEEEEcccc
Confidence 9999999996 55999999999999997665
No 55
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.76 E-value=9.1e-18 Score=132.46 Aligned_cols=121 Identities=17% Similarity=0.153 Sum_probs=86.1
Q ss_pred CCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccce-------eeecccCC---CCCCCCCchHHHHH
Q 035566 87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDG-------IVNFESLN---PTNKTTGQELQLIS 153 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~-------i~~~~~~~---~~k~~~~~~~~~~~ 153 (238)
.++++||+.++++.++.. .+|+|++.......+.+++|+...+.. .+++...+ ..++ +...+.+
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~---K~~~L~~ 255 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQY---KADTLTR 255 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCccc---HHHHHHH
Confidence 367899999999988754 579999998888888999988654432 12111111 1222 3344445
Q ss_pred HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-CccccccccC--hhHHHHHh
Q 035566 154 MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALEN--IHNIREAF 211 (238)
Q Consensus 154 ~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~--~~el~~~l 211 (238)
+++++|+++++|++|||+.||+.|++.+|+..++ +..+. +..|++++++ ++.+.-++
T Consensus 256 la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 256 LAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred HHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 6899999999999999999999999999997666 44333 6789988873 44444433
No 56
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.76 E-value=4e-17 Score=122.10 Aligned_cols=180 Identities=12% Similarity=0.060 Sum_probs=113.6
Q ss_pred eeEEEEecCCceeeCc---cchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHH----hhccchhhhhhccCCCC-hH--
Q 035566 4 YECLLFDVDDTLYSHS---YGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYK----NYGTSMAGLKAVGYDFD-ND-- 73 (238)
Q Consensus 4 ~k~vifD~DGTL~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~-- 73 (238)
+++|+||+.||+++.+ ..+++...+.+..++.++..-+ ....+...... ..-.....+...+.... ..
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk~l 78 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYEST--IVENLRELGKTPEELILLRKLHAEMDKDRKATPLKTL 78 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCH--HHHHHHHhccCCcHHHHHHHHHHHHHcCCCcchHHHH
Confidence 5789999999999953 2345555566666665443222 11111110000 00000001111111111 11
Q ss_pred ---hHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhc---CcccccceeeecccCCCCCCC
Q 035566 74 ---DYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKL---GLEDCFDGIVNFESLNPTNKT 144 (238)
Q Consensus 74 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~---~~~~~f~~i~~~~~~~~~k~~ 144 (238)
.|.+.+... ....+++||+.++|+.|+.+ .+|+||++...+...+++. ++..+|+.++... .+ .|
T Consensus 79 qg~iw~~~Y~~~--~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~-~g-~K-- 152 (220)
T TIGR01691 79 QGLIWRQGYESG--ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTT-VG-LK-- 152 (220)
T ss_pred HHHHHHHHHhcC--CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeC-cc-cC--
Confidence 133333321 23457899999999999754 5799999988888888876 5667787766432 22 34
Q ss_pred CCchHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566 145 TGQELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR 193 (238)
Q Consensus 145 ~~~~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~ 193 (238)
+.+..|.. ++++|++|++++||||+..|+.+|+++|+.++++.++.+
T Consensus 153 --P~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 153 --TEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGN 200 (220)
T ss_pred --CCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence 47766664 899999999999999999999999999999999977653
No 57
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.74 E-value=5.1e-18 Score=120.10 Aligned_cols=99 Identities=21% Similarity=0.235 Sum_probs=73.6
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCCh---------------HHHHHHHHhcCcccc--cceeee-cccCCCCCCCCCc
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADE---------------IHVAKVLRKLGLEDC--FDGIVN-FESLNPTNKTTGQ 147 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~---------------~~~~~~l~~~~~~~~--f~~i~~-~~~~~~~k~~~~~ 147 (238)
.++||+.++|+.|+.+ .+|+||++. ..+...++++|+... |..... ++.....||
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP---- 102 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKP---- 102 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCC----
Confidence 4678899999888755 579999863 456677888887621 111111 233334454
Q ss_pred hHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCC
Q 035566 148 ELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTS 191 (238)
Q Consensus 148 ~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~ 191 (238)
.++++.. ++.++++|++|++|||+..|+++|+++|+++++++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 103 KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 6776665 8999999999999999999999999999999999764
No 58
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.74 E-value=2.1e-18 Score=123.84 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=84.3
Q ss_pred CCCCCChhHHHHHhcCCCC---eEEEecC-ChHHHHHHHHhcCcc---------cccceeeecccCCCCCCCCCchHHHH
Q 035566 86 ENLKPDPVLRNLLLSLPIR---KVIFSNA-DEIHVAKVLRKLGLE---------DCFDGIVNFESLNPTNKTTGQELQLI 152 (238)
Q Consensus 86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~-~~~~~~~~l~~~~~~---------~~f~~i~~~~~~~~~k~~~~~~~~~~ 152 (238)
....++||+.++|+.|+.+ .+++||+ ....++..++.+++. .+|+.+++++..... ++.+.++
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~----kp~~~i~ 117 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKA----KQLEMIL 117 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchH----HHHHHHH
Confidence 3467889999999999755 5799988 888889999999998 999999987753322 2355666
Q ss_pred HHH-Hhc--CCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 153 SML-RMV--AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 153 ~~~-~~~--~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
+.+ +.+ |++|++|+||||++.|+.+|+.+|+.++++.++.
T Consensus 118 ~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 118 QKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred HHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 654 344 6999999999999999999999999999998865
No 59
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.74 E-value=2.3e-17 Score=124.30 Aligned_cols=97 Identities=12% Similarity=0.114 Sum_probs=78.0
Q ss_pred CCCCChhHHHHHhcCCCC---eEEEecC----ChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcC
Q 035566 87 NLKPDPVLRNLLLSLPIR---KVIFSNA----DEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVA 159 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~---~~i~t~~----~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~ 159 (238)
...+.+++.++|+.++.+ .+++||. ....+..+++++|+..+|+.+++++.....|| .+. .++++++
T Consensus 112 ~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp----~~~--~~l~~~~ 185 (237)
T TIGR01672 112 FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQY----TKT--QWIQDKN 185 (237)
T ss_pred CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCC----CHH--HHHHhCC
Confidence 346677799999998765 5799998 66788888999999999999888776665444 332 3556677
Q ss_pred CCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566 160 HHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR 193 (238)
Q Consensus 160 ~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~ 193 (238)
+ ++||||+.+|+.+|+++|+.++.+.++..
T Consensus 186 i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~ 215 (237)
T TIGR01672 186 I----RIHYGDSDNDITAAKEAGARGIRILRASN 215 (237)
T ss_pred C----eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence 6 79999999999999999999999987763
No 60
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.73 E-value=8.3e-17 Score=119.39 Aligned_cols=189 Identities=12% Similarity=0.109 Sum_probs=110.1
Q ss_pred eEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccchhhhhhccCCCChHhHHHhhhCCCC
Q 035566 5 ECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSMAGLKAVGYDFDNDDYHSFVHGRLP 84 (238)
Q Consensus 5 k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (238)
.+++|||||||++. .|. ++....|........-....+..+....-.+.. ..+.+.+.+.+...
T Consensus 2 ~la~FDlD~TLi~~------~w~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~-~~g~~~~~i~~~~~---- 65 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWI-----AFAEKTGIDALKATTRDIPDYDVLMKQRLRILD-EHGLKLGDIQEVIA---- 65 (203)
T ss_pred eEEEEeCCcccHHH------HHH-----HHHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHH-HCCCCHHHHHHHHH----
Confidence 57999999999983 232 355566654322100000011111111111111 12445555544432
Q ss_pred CCCCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeeccc----CCCCCCCCCchHHHHHHHHhc
Q 035566 85 YENLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFES----LNPTNKTTGQELQLISMLRMV 158 (238)
Q Consensus 85 ~~~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~----~~~~k~~~~~~~~~~~~~~~~ 158 (238)
.++++||+.++++.++. +.+|+|++....+..+++++|++.+|..-...++ .+.....+..+......++..
T Consensus 66 --~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~ 143 (203)
T TIGR02137 66 --TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 143 (203)
T ss_pred --hCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh
Confidence 25688999999988864 4689999999999999999999887753222111 010000011233333334555
Q ss_pred CCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCcc-cc-ccccChhHHHHHhHHh
Q 035566 159 AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKG-AD-YALENIHNIREAFPEL 214 (238)
Q Consensus 159 ~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~-ad-~v~~~~~el~~~l~~~ 214 (238)
+. ++++|||+.||+.|++.+|.+.++...+.-... ++ .++.+++||...+...
T Consensus 144 ~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 144 YY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 53 799999999999999999987666555443222 33 4566788887766543
No 61
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.71 E-value=1.2e-16 Score=111.15 Aligned_cols=94 Identities=20% Similarity=0.266 Sum_probs=73.5
Q ss_pred CCChhHHHHHhcCCC---CeEEEecCC--------hHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHH
Q 035566 89 KPDPVLRNLLLSLPI---RKVIFSNAD--------EIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLR 156 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~---~~~i~t~~~--------~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~ 156 (238)
.++|++.++|+.|+. +.+++||+. ...+...++++++. ++..+.+. ...|| .+++++ +++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~~KP----~~~~~~~~~~ 96 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HCRKP----KPGMFLEALK 96 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CCCCC----ChHHHHHHHH
Confidence 456888888887764 467999998 77888899999986 34444333 34454 666665 589
Q ss_pred hc-CCCCCeEEEEeC-CccchhHHHhcCCeEEEecC
Q 035566 157 MV-AHHFFQRLFFDD-STRNIECGKSIGLHTVLVGT 190 (238)
Q Consensus 157 ~~-~~~~~~~v~vgD-~~~di~~a~~~G~~~i~v~~ 190 (238)
++ +++|+++++||| +..|+.+|+++|+.+|+++.
T Consensus 97 ~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~ 132 (132)
T TIGR01662 97 RFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVAP 132 (132)
T ss_pred HcCCCChhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence 99 599999999999 79999999999999999863
No 62
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.69 E-value=1.1e-16 Score=119.37 Aligned_cols=187 Identities=17% Similarity=0.215 Sum_probs=114.6
Q ss_pred CceeEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHH--hhccchhhhhhccCCCChHhHHHhh
Q 035566 2 TKYECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYK--NYGTSMAGLKAVGYDFDNDDYHSFV 79 (238)
Q Consensus 2 ~~~k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (238)
+++++++|||||||++ ...+. .+....|............+.. .+..........-...+.+...+..
T Consensus 3 ~~~~L~vFD~D~TLi~------~~~~~----~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~ 72 (212)
T COG0560 3 RMKKLAVFDLDGTLIN------AELID----ELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVR 72 (212)
T ss_pred CccceEEEecccchhh------HHHHH----HHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 3578999999999999 22221 3444555544332221111111 1111111111111223333333322
Q ss_pred hCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeeccc---CC----CCCCCCCchH
Q 035566 80 HGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFES---LN----PTNKTTGQEL 149 (238)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~---~~----~~k~~~~~~~ 149 (238)
.+ . .+.+|++.++++.++.. .+|+|+++...+.++.+.+|++..+...+...+ .+ ..-....|..
T Consensus 73 ~~-~----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~ 147 (212)
T COG0560 73 EE-F----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAK 147 (212)
T ss_pred Hh-c----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHH
Confidence 21 1 67789999999888765 579999999999999999999987766554443 11 1111123456
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-CccccccccCh
Q 035566 150 QLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALENI 204 (238)
Q Consensus 150 ~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~ 204 (238)
.+.++++.+|+++++++++|||.||+.|...+|.+ +.++..+. ...++......
T Consensus 148 ~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~-ia~n~~~~l~~~a~~~~~~~ 202 (212)
T COG0560 148 ALRELAAELGIPLEETVAYGDSANDLPMLEAAGLP-IAVNPKPKLRALADVRIWPI 202 (212)
T ss_pred HHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCC-eEeCcCHHHHHHHHHhcChh
Confidence 66678999999999999999999999999999975 55544432 44444444443
No 63
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.69 E-value=8.5e-17 Score=114.89 Aligned_cols=99 Identities=15% Similarity=0.254 Sum_probs=80.6
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCC---------------hHHHHHHHHhcCcccccceeee-----cccCCCCCCC
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNAD---------------EIHVAKVLRKLGLEDCFDGIVN-----FESLNPTNKT 144 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~---------------~~~~~~~l~~~~~~~~f~~i~~-----~~~~~~~k~~ 144 (238)
++++||+.++|+.|+.+ .+|+||.+ ...+..+++.+|+. |+.++. +++....||
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP- 104 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKP- 104 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCC-
Confidence 46789999999998754 57999963 45677889999997 776554 355666665
Q ss_pred CCchHHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 145 TGQELQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 145 ~~~~~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
.+.++.. +++++++|++++||||+.+|+.+|+.+|++++++.++.
T Consensus 105 ---~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 105 ---KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred ---CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence 6666664 89999999999999999999999999999999998875
No 64
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.69 E-value=9e-17 Score=123.89 Aligned_cols=120 Identities=11% Similarity=0.062 Sum_probs=90.1
Q ss_pred ChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCCeEE
Q 035566 91 DPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFFQRL 166 (238)
Q Consensus 91 ~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~~v 166 (238)
++++.+.++.++.. .++.||.+.......+..+|...+|+.+......... ..+||.+.++.. +++++++|++++
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~-~~gKP~p~~~~~~~~~~~~~~~~~~ 200 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKAT-VVGKPSKTFFLEALRATGCEPEEAV 200 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCce-eecCCCHHHHHHHHHHhCCChhhEE
Confidence 56777777776533 4788888776665566677888888777654433221 112457777775 789999999999
Q ss_pred EEeCCc-cchhHHHhcCCeEEEecCCCC--------CccccccccChhHHHHHh
Q 035566 167 FFDDST-RNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNIREAF 211 (238)
Q Consensus 167 ~vgD~~-~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el~~~l 211 (238)
||||+. +|+.+|+++|+.++++.+|.. ...++++++++.||.+++
T Consensus 201 ~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 201 MIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred EECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 999996 899999999999999988741 345899999999998764
No 65
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.66 E-value=4.5e-16 Score=110.78 Aligned_cols=111 Identities=19% Similarity=0.215 Sum_probs=85.8
Q ss_pred HHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccc
Q 035566 95 RNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRN 174 (238)
Q Consensus 95 ~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~d 174 (238)
.+.|+.-..+.+|+||.+...+...++++|+..+|+.. ++ +...+..+++++|+++++|++|||+.+|
T Consensus 37 i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~~---------~~---k~~~~~~~~~~~~~~~~~~~~vGDs~~D 104 (154)
T TIGR01670 37 IRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQGQ---------SN---KLIAFSDILEKLALAPENVAYIGDDLID 104 (154)
T ss_pred HHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEecc---------cc---hHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 34444444567899999999999999999988776521 22 3445555689999999999999999999
Q ss_pred hhHHHhcCCeEEEecCCCC--CccccccccChhH---HHHHhHHhhhcc
Q 035566 175 IECGKSIGLHTVLVGTSRR--TKGADYALENIHN---IREAFPELWDAD 218 (238)
Q Consensus 175 i~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e---l~~~l~~~~~~~ 218 (238)
+.+++.+|+. +++.+... ...+++++.+... +.+++++++...
T Consensus 105 ~~~~~~ag~~-~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~~~~ 152 (154)
T TIGR01670 105 WPVMEKVGLS-VAVADAHPLLIPRADYVTRIAGGRGAVREVCELLLLAQ 152 (154)
T ss_pred HHHHHHCCCe-EecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHHHhh
Confidence 9999999996 77765543 6668999987754 888888777654
No 66
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.66 E-value=2.6e-16 Score=119.97 Aligned_cols=106 Identities=16% Similarity=0.202 Sum_probs=71.5
Q ss_pred EEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEE
Q 035566 107 IFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTV 186 (238)
Q Consensus 107 i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i 186 (238)
+.++.....+...++.++.. +..+.+.......+++..+...+..+++.+|++++++++|||+.||++|++.+|+..+
T Consensus 120 ~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~va 197 (230)
T PRK01158 120 LRRTVPVEEVRELLEELGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVA 197 (230)
T ss_pred ecccccHHHHHHHHHHcCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEE
Confidence 33444445566666665431 2222222223444455556777888899999999999999999999999999998654
Q ss_pred EecCCCC-CccccccccChhH--HHHHhHHh
Q 035566 187 LVGTSRR-TKGADYALENIHN--IREAFPEL 214 (238)
Q Consensus 187 ~v~~~~~-~~~ad~v~~~~~e--l~~~l~~~ 214 (238)
+-+..+. +..|++++.+.++ +.+.|.++
T Consensus 198 m~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~ 228 (230)
T PRK01158 198 VANADEELKEAADYVTEKSYGEGVAEAIEHL 228 (230)
T ss_pred ecCccHHHHHhcceEecCCCcChHHHHHHHH
Confidence 4444333 6778999987666 66666554
No 67
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.65 E-value=4.4e-16 Score=111.65 Aligned_cols=112 Identities=17% Similarity=0.178 Sum_probs=84.5
Q ss_pred HHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccch
Q 035566 96 NLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNI 175 (238)
Q Consensus 96 ~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di 175 (238)
..|+....+.+|+||.+...+...++.+|+..+|+.+ || +...+..++++++++++++++|||+.||+
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~---------kp---kp~~~~~~~~~l~~~~~ev~~iGD~~nDi 111 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI---------KK---KTEPYAQMLEEMNISDAEVCYVGDDLVDL 111 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC---------CC---CHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence 4455556778999999999999999999998887632 33 23345556899999999999999999999
Q ss_pred hHHHhcCCeEEEecCCCC-CccccccccChhH---HHHHhHHhhhccc
Q 035566 176 ECGKSIGLHTVLVGTSRR-TKGADYALENIHN---IREAFPELWDADE 219 (238)
Q Consensus 176 ~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~e---l~~~l~~~~~~~~ 219 (238)
.|++.+|+..+.-+.... +..|++++.+..+ +.+++..+++..+
T Consensus 112 ~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~il~~~~ 159 (169)
T TIGR02726 112 SMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAVREVAELILKAQG 159 (169)
T ss_pred HHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHHHHHHhcC
Confidence 999999997665555443 6678888764332 4566666666554
No 68
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.64 E-value=8.4e-16 Score=107.35 Aligned_cols=103 Identities=23% Similarity=0.287 Sum_probs=80.6
Q ss_pred CCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCC------------CchHH
Q 035566 86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTT------------GQELQ 150 (238)
Q Consensus 86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~------------~~~~~ 150 (238)
....+++++.++|+.++.+ .+++|++....+...++.+++..+++.+++........+.. ++.+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 4467788999998888654 67999999999999999999988888888766544331100 23444
Q ss_pred HHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEe
Q 035566 151 LIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLV 188 (238)
Q Consensus 151 ~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v 188 (238)
.+. +.++++.+++++++|||+.+|+.+++.+|++++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 444 58888998999999999999999999999998874
No 69
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.64 E-value=6.4e-15 Score=108.74 Aligned_cols=94 Identities=13% Similarity=0.166 Sum_probs=69.7
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCC----------------CCCCCCCch
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLN----------------PTNKTTGQE 148 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~----------------~~k~~~~~~ 148 (238)
.+++||+.++|+.++.+ .+++||+....++..++++|+..+|+.+++++... ...+.+..+
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 57889999999888644 67999999999999999999999999888654311 001111223
Q ss_pred HHHHHH-HHhcCCCCCeEEEEeCCccchhHHHhcCCe
Q 035566 149 LQLISM-LRMVAHHFFQRLFFDDSTRNIECGKSIGLH 184 (238)
Q Consensus 149 ~~~~~~-~~~~~~~~~~~v~vgD~~~di~~a~~~G~~ 184 (238)
+.+++. .+.. ++++++|||+.+|+.+|+.+++.
T Consensus 151 ~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 151 GKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred HHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 445444 3332 78999999999999999999753
No 70
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.64 E-value=5.5e-16 Score=121.20 Aligned_cols=114 Identities=19% Similarity=0.177 Sum_probs=81.7
Q ss_pred CChhHHHHHhcCCCC--eEEEecCChHHHH-HHHHhcCcccccceeeec---ccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566 90 PDPVLRNLLLSLPIR--KVIFSNADEIHVA-KVLRKLGLEDCFDGIVNF---ESLNPTNKTTGQELQLISM-LRMVAHHF 162 (238)
Q Consensus 90 ~~~~~~~~l~~l~~~--~~i~t~~~~~~~~-~~l~~~~~~~~f~~i~~~---~~~~~~k~~~~~~~~~~~~-~~~~~~~~ 162 (238)
.++++.++++.++.+ .+++||.+..... ..+...+...+|+.+... ......| |.+.++.. ++++|++|
T Consensus 144 ~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gK----P~p~~~~~~~~~~~~~~ 219 (279)
T TIGR01452 144 SYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGK----PSPYMFECITENFSIDP 219 (279)
T ss_pred CHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCC----CCHHHHHHHHHHhCCCh
Confidence 378899999988754 4688887754321 223344555666655432 2222334 47777665 88999999
Q ss_pred CeEEEEeCCc-cchhHHHhcCCeEEEecCCCC--------------CccccccccChhHH
Q 035566 163 FQRLFFDDST-RNIECGKSIGLHTVLVGTSRR--------------TKGADYALENIHNI 207 (238)
Q Consensus 163 ~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~--------------~~~ad~v~~~~~el 207 (238)
++++||||+. .||.+|+++|+++++|.+|.. ..+||++++++.||
T Consensus 220 ~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 220 ARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred hhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 9999999995 999999999999999988752 13588999888764
No 71
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.63 E-value=2.5e-15 Score=108.05 Aligned_cols=92 Identities=17% Similarity=0.211 Sum_probs=70.1
Q ss_pred CChhHHHHHhcCCCC---eEEEecCChH------------HHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-
Q 035566 90 PDPVLRNLLLSLPIR---KVIFSNADEI------------HVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS- 153 (238)
Q Consensus 90 ~~~~~~~~l~~l~~~---~~i~t~~~~~------------~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~- 153 (238)
++||+.++|+.|+.+ .+|+||++.. .+..+++++|+. ++.+++++.....|| .+.++.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~~KP----~p~~~~~ 116 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLYRKP----MTGMWEY 116 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCCCCC----ccHHHHH
Confidence 578999999888654 5799997653 467788999985 355555554444454 555555
Q ss_pred HHHhcC--CCCCeEEEEeCCc--------cchhHHHhcCCeEEE
Q 035566 154 MLRMVA--HHFFQRLFFDDST--------RNIECGKSIGLHTVL 187 (238)
Q Consensus 154 ~~~~~~--~~~~~~v~vgD~~--------~di~~a~~~G~~~i~ 187 (238)
+++++| +++++++||||+. +|+++|+++|+.+++
T Consensus 117 ~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 117 LQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 588998 9999999999996 699999999998764
No 72
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.63 E-value=1.9e-15 Score=118.11 Aligned_cols=72 Identities=18% Similarity=0.194 Sum_probs=56.5
Q ss_pred CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHHhh
Q 035566 143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPELW 215 (238)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~~~ 215 (238)
++..+...+..+++.+|++++++++|||+.||++|++.+|+. +.++++.+ +..|++++.+.++ +.++|.+++
T Consensus 196 ~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~-vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 196 KGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLG-VAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred CCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCce-EEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 333456677778999999999999999999999999999984 45544443 6679999988776 777776653
No 73
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.61 E-value=5.2e-15 Score=111.36 Aligned_cols=126 Identities=11% Similarity=0.096 Sum_probs=83.5
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc---ceeeecccCCCCCCCCCch-------HHHHHH
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF---DGIVNFESLNPTNKTTGQE-------LQLISM 154 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f---~~i~~~~~~~~~k~~~~~~-------~~~~~~ 154 (238)
.+++||+.++++.++.+ .+|+|++....+..+++.++....+ +..+..+.....+|..... ..-..+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~ 148 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSL 148 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHH
Confidence 57889999999988654 6799999999999999887543333 2233333333333311000 000134
Q ss_pred HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCC-----CCCccccccccChhHHHHHhHHhh
Q 035566 155 LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTS-----RRTKGADYALENIHNIREAFPELW 215 (238)
Q Consensus 155 ~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~-----~~~~~ad~v~~~~~el~~~l~~~~ 215 (238)
++.++..++++++|||+.+|+.+|+.+|+ +.+... .....+...++++.|+.+.|.+.+
T Consensus 149 l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~~ 212 (214)
T TIGR03333 149 IRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARDYLLNECEELGLNHAPFQDFYDVRKELENVK 212 (214)
T ss_pred HHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHHh
Confidence 56666678899999999999999999998 333221 123346677889999988887655
No 74
>PLN02645 phosphoglycolate phosphatase
Probab=99.61 E-value=1.4e-15 Score=120.46 Aligned_cols=108 Identities=15% Similarity=0.091 Sum_probs=80.1
Q ss_pred CCeEEEecCChHH-HHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCCeEEEEeCCc-cchhHHH
Q 035566 103 IRKVIFSNADEIH-VAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFFQRLFFDDST-RNIECGK 179 (238)
Q Consensus 103 ~~~~i~t~~~~~~-~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~~v~vgD~~-~di~~a~ 179 (238)
...+|+||.+... ....+...|...+|+.+......... -.+||.+.++.. ++++++++++++||||+. +|+.+|+
T Consensus 187 g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~-~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~ 265 (311)
T PLN02645 187 GCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPL-VVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQ 265 (311)
T ss_pred CCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcc-cCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHH
Confidence 3467899887643 22334556777778877665543321 123458887775 789999999999999997 9999999
Q ss_pred hcCCeEEEecCCCC----------CccccccccChhHHHHHh
Q 035566 180 SIGLHTVLVGTSRR----------TKGADYALENIHNIREAF 211 (238)
Q Consensus 180 ~~G~~~i~v~~~~~----------~~~ad~v~~~~~el~~~l 211 (238)
++|+++++|.+|.. ...|+++++++.+|.+++
T Consensus 266 ~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~ 307 (311)
T PLN02645 266 NGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLK 307 (311)
T ss_pred HcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHh
Confidence 99999999987752 146899999999987754
No 75
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.58 E-value=1.8e-14 Score=108.63 Aligned_cols=109 Identities=15% Similarity=0.164 Sum_probs=79.5
Q ss_pred hHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecC----ChHHHHHHHHhcCc--ccccceeeecccCCCCC
Q 035566 72 NDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNA----DEIHVAKVLRKLGL--EDCFDGIVNFESLNPTN 142 (238)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~----~~~~~~~~l~~~~~--~~~f~~i~~~~~~~~~k 142 (238)
.+.|++++.+.. .....|+||+.++|+.++.+ .+++||. .......+++.+|+ .++|+.+++.+.. .|
T Consensus 98 ~~~fw~~y~~~~-~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K 174 (237)
T PRK11009 98 NQKFWEKMNNGW-DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQ 174 (237)
T ss_pred hHHHHHHHHhcc-cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CC
Confidence 344555555432 23467899999999998654 6799985 34566777778999 8888888776642 33
Q ss_pred CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566 143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR 193 (238)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~ 193 (238)
+ .. ...++++++ +++|||+.+|+.+|+++|+.++.+.++..
T Consensus 175 ~----~K--~~~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 175 Y----TK--TQWLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred C----CH--HHHHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 2 21 124556665 89999999999999999999999988763
No 76
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.57 E-value=4e-14 Score=112.58 Aligned_cols=109 Identities=17% Similarity=0.260 Sum_probs=81.6
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecC---------------ChHHHHHHHHhcCcccccceeeec-----ccCCCCCCC
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNA---------------DEIHVAKVLRKLGLEDCFDGIVNF-----ESLNPTNKT 144 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~---------------~~~~~~~~l~~~~~~~~f~~i~~~-----~~~~~~k~~ 144 (238)
..++||+.++|+.|+.+ .+|+||. ....+..+++.+++. |+.++.+ +.....||
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP- 105 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKP- 105 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCC-
Confidence 57889999999988754 5799995 244566677888874 7766543 33344454
Q ss_pred CCchHHHHH-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHh
Q 035566 145 TGQELQLIS-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAF 211 (238)
Q Consensus 145 ~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l 211 (238)
.+.++. +++.++++|++++||||+.+|+++|+.+|+++++++... -+|+++.+.|
T Consensus 106 ---~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~---------~~~~~i~~~l 161 (354)
T PRK05446 106 ---KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARET---------LNWDAIAEQL 161 (354)
T ss_pred ---CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECCC---------CCHHHHHHHH
Confidence 666665 578899999999999999999999999999999995532 3455666553
No 77
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.56 E-value=4.3e-14 Score=105.59 Aligned_cols=100 Identities=19% Similarity=0.202 Sum_probs=72.3
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccce-eeeccc-CCCCC---C--CC-CchHHHHHHHH
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDG-IVNFES-LNPTN---K--TT-GQELQLISMLR 156 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~-i~~~~~-~~~~k---~--~~-~~~~~~~~~~~ 156 (238)
..++|++.++++.++.+ .+|+|++....+..+++++|+..+|.. +....+ .-..+ + .+ .+...+.++++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~ 165 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA 165 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence 35789999999887654 579999999999999999999877655 222111 00000 0 11 12333555678
Q ss_pred hcCCCCCeEEEEeCCccchhHHHhcCCeEEE
Q 035566 157 MVAHHFFQRLFFDDSTRNIECGKSIGLHTVL 187 (238)
Q Consensus 157 ~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~ 187 (238)
+.++++++++++|||.+|+++++.+|...+.
T Consensus 166 ~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 166 EEQIDLKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred HcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 8999999999999999999999999975443
No 78
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.55 E-value=7.2e-14 Score=102.15 Aligned_cols=94 Identities=23% Similarity=0.259 Sum_probs=68.1
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccC----C---C-CCCCC-CchHHHHHHH
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL----N---P-TNKTT-GQELQLISML 155 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~----~---~-~k~~~-~~~~~~~~~~ 155 (238)
++++|++.++++.++.+ .+|+|++....+..+++++|+..+|...+..... + . ..+.+ .+...+.+++
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~ 151 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL 151 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence 45789999999888654 5799999999999999999988776554433211 0 0 01111 2233444557
Q ss_pred HhcCCCCCeEEEEeCCccchhHHHhc
Q 035566 156 RMVAHHFFQRLFFDDSTRNIECGKSI 181 (238)
Q Consensus 156 ~~~~~~~~~~v~vgD~~~di~~a~~~ 181 (238)
+.++++++++++|||+.+|+.|++.+
T Consensus 152 ~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 152 EESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 88899999999999999999998764
No 79
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.55 E-value=8.7e-15 Score=107.22 Aligned_cols=101 Identities=18% Similarity=0.285 Sum_probs=76.4
Q ss_pred HhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhH
Q 035566 98 LLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIEC 177 (238)
Q Consensus 98 l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~ 177 (238)
|+.-....+|+|+.+...+...++.+|+..+|.. .++ +...+..+++++|+++++++||||+.+|+.+
T Consensus 60 L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g---------~~~---k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~ 127 (183)
T PRK09484 60 LLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQG---------QSN---KLIAFSDLLEKLAIAPEQVAYIGDDLIDWPV 127 (183)
T ss_pred HHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecC---------CCc---HHHHHHHHHHHhCCCHHHEEEECCCHHHHHH
Confidence 3333455789999999999999999998776641 111 2455666799999999999999999999999
Q ss_pred HHhcCCeEEEecCCCC--Ccccccccc------ChhHHHHHh
Q 035566 178 GKSIGLHTVLVGTSRR--TKGADYALE------NIHNIREAF 211 (238)
Q Consensus 178 a~~~G~~~i~v~~~~~--~~~ad~v~~------~~~el~~~l 211 (238)
++.+|+.. .+++..+ +..+++++. .+.|+.+++
T Consensus 128 a~~aG~~~-~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i 168 (183)
T PRK09484 128 MEKVGLSV-AVADAHPLLLPRADYVTRIAGGRGAVREVCDLL 168 (183)
T ss_pred HHHCCCeE-ecCChhHHHHHhCCEEecCCCCCCHHHHHHHHH
Confidence 99999984 4554432 556899986 567776554
No 80
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.54 E-value=6.5e-15 Score=111.84 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=65.9
Q ss_pred EEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEE
Q 035566 107 IFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTV 186 (238)
Q Consensus 107 i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i 186 (238)
+.+..........++.++.. +.............+...+...+..+++++|++++++++|||+.||+.|++.+|+. +
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~-v 188 (225)
T TIGR01482 112 MRYGIDVDTVREIIKELGLN--LVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG-V 188 (225)
T ss_pred EeecCCHHHHHHHHHhcCce--EEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce-E
Confidence 44444556666677776643 11111111223333444567777778999999999999999999999999999985 5
Q ss_pred EecCCCC--CccccccccChhH
Q 035566 187 LVGTSRR--TKGADYALENIHN 206 (238)
Q Consensus 187 ~v~~~~~--~~~ad~v~~~~~e 206 (238)
.+.++.+ +..|++|+.+..+
T Consensus 189 am~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 189 AVANAQPELKEWADYVTESPYG 210 (225)
T ss_pred EcCChhHHHHHhcCeecCCCCC
Confidence 5544443 6788999877655
No 81
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.54 E-value=5.9e-14 Score=109.51 Aligned_cols=77 Identities=13% Similarity=0.113 Sum_probs=61.5
Q ss_pred CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHH
Q 035566 138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPE 213 (238)
Q Consensus 138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~ 213 (238)
.....++..+..++..+++.+|++++++++|||+.||++|.+.+|.. +.+.++.+ +..|++|+.+.++ +...|.+
T Consensus 188 ~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~-vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 188 LEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVG-VAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred EEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCce-EEecCccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 34555666778888889999999999999999999999999999985 55544443 7789999988766 7777766
Q ss_pred hh
Q 035566 214 LW 215 (238)
Q Consensus 214 ~~ 215 (238)
++
T Consensus 267 ~~ 268 (270)
T PRK10513 267 YV 268 (270)
T ss_pred Hh
Confidence 54
No 82
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.53 E-value=1.9e-14 Score=110.62 Aligned_cols=114 Identities=12% Similarity=0.097 Sum_probs=71.5
Q ss_pred CChhHHHHHhcCCC-CeEEEecCChHHHHHHHHhcCcc---cccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCCe
Q 035566 90 PDPVLRNLLLSLPI-RKVIFSNADEIHVAKVLRKLGLE---DCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFFQ 164 (238)
Q Consensus 90 ~~~~~~~~l~~l~~-~~~i~t~~~~~~~~~~l~~~~~~---~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~ 164 (238)
.++.+...+..++. ..+++||.+......-....+-. ..+....+.+.....| |.+.+++. ++.+++++++
T Consensus 122 ~y~~l~~a~~~l~~g~~~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gK----P~~~~~~~~~~~~~~~~~~ 197 (249)
T TIGR01457 122 DYEKFATATLAIRKGAHFIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGK----PNAIIMEKAVEHLGTEREE 197 (249)
T ss_pred CHHHHHHHHHHHHCCCeEEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCC----ChHHHHHHHHHHcCCCccc
Confidence 34555555554432 24677776553221100001111 1122223333333344 58888776 7899999999
Q ss_pred EEEEeCCc-cchhHHHhcCCeEEEecCCCC------C--ccccccccChhHH
Q 035566 165 RLFFDDST-RNIECGKSIGLHTVLVGTSRR------T--KGADYALENIHNI 207 (238)
Q Consensus 165 ~v~vgD~~-~di~~a~~~G~~~i~v~~~~~------~--~~ad~v~~~~~el 207 (238)
+++|||+. .|+.+|+++|+++++|.++.. . ..++++++++.++
T Consensus 198 ~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 198 TLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred EEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 99999997 899999999999999988752 1 3578888887653
No 83
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.52 E-value=2.5e-13 Score=98.29 Aligned_cols=93 Identities=19% Similarity=0.126 Sum_probs=72.3
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCC-hHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCC
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNAD-EIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHF 162 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~-~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~ 162 (238)
..++|++.++|+.|+.. .+++||++ ...+..+++.+++..++ ...|| .+.++.. ++++++++
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~~KP----~p~~~~~~l~~~~~~~ 108 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HAVKP----PGCAFRRAHPEMGLTS 108 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CCCCC----ChHHHHHHHHHcCCCH
Confidence 46778888888888644 67999988 56666666777654221 22344 6666664 89999999
Q ss_pred CeEEEEeCCc-cchhHHHhcCCeEEEecCCCC
Q 035566 163 FQRLFFDDST-RNIECGKSIGLHTVLVGTSRR 193 (238)
Q Consensus 163 ~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~ 193 (238)
+++++|||+. .|+.+|+++|+.+++++++..
T Consensus 109 ~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 109 EQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred HHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 9999999998 799999999999999988764
No 84
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.52 E-value=9.9e-14 Score=107.90 Aligned_cols=78 Identities=23% Similarity=0.311 Sum_probs=61.5
Q ss_pred CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-CccccccccChhH--HHHHhHHh
Q 035566 138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALENIHN--IREAFPEL 214 (238)
Q Consensus 138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~e--l~~~l~~~ 214 (238)
.....++..+..++..+++.+|++++++++|||+.||++|.+.+|...++-+..++ +..|++++.+.++ +.+.|.++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~ 260 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEKL 260 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHH
Confidence 56666666778888888999999999999999999999999999986555444333 6778888777666 77777665
Q ss_pred h
Q 035566 215 W 215 (238)
Q Consensus 215 ~ 215 (238)
+
T Consensus 261 ~ 261 (264)
T COG0561 261 L 261 (264)
T ss_pred h
Confidence 4
No 85
>PLN02887 hydrolase family protein
Probab=99.52 E-value=2.1e-13 Score=115.08 Aligned_cols=76 Identities=14% Similarity=0.060 Sum_probs=60.6
Q ss_pred CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH--HHHHhHH
Q 035566 138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN--IREAFPE 213 (238)
Q Consensus 138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e--l~~~l~~ 213 (238)
.....++..|..++..+++.+|++++++++|||+.||++|.+.+|+. +.+.++.+ +..|++|+.+.+| +...|.+
T Consensus 499 lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~g-VAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 499 LEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLG-VALSNGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred EEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCE-EEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 34445555678889889999999999999999999999999999985 55555543 7789999988766 6666655
Q ss_pred h
Q 035566 214 L 214 (238)
Q Consensus 214 ~ 214 (238)
+
T Consensus 578 ~ 578 (580)
T PLN02887 578 Y 578 (580)
T ss_pred h
Confidence 4
No 86
>PRK10976 putative hydrolase; Provisional
Probab=99.52 E-value=1.3e-13 Score=107.37 Aligned_cols=78 Identities=10% Similarity=0.116 Sum_probs=59.8
Q ss_pred CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-Ccccc--ccccChhH--HHHHhH
Q 035566 138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGAD--YALENIHN--IREAFP 212 (238)
Q Consensus 138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad--~v~~~~~e--l~~~l~ 212 (238)
.....++..+..++..+++.+|++++++++|||+.||++|.+.+|...++-+..+. +..|+ +++.+.+| +...|.
T Consensus 182 ~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 182 LEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred EEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 34444555678888888999999999999999999999999999985444444433 56665 78877766 777776
Q ss_pred Hhh
Q 035566 213 ELW 215 (238)
Q Consensus 213 ~~~ 215 (238)
+++
T Consensus 262 ~~~ 264 (266)
T PRK10976 262 KLY 264 (266)
T ss_pred HHh
Confidence 654
No 87
>PRK11590 hypothetical protein; Provisional
Probab=99.48 E-value=1.2e-12 Score=98.36 Aligned_cols=103 Identities=10% Similarity=-0.058 Sum_probs=68.4
Q ss_pred CCCChhHHHHH-hcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecc-c---CC-CCCCCCCchHHHHHHHHhc
Q 035566 88 LKPDPVLRNLL-LSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFE-S---LN-PTNKTTGQELQLISMLRMV 158 (238)
Q Consensus 88 ~~~~~~~~~~l-~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~-~---~~-~~k~~~~~~~~~~~~~~~~ 158 (238)
..++||+.+.| +.++. +.+|+|+++...+..+++.+|+.. .+.+++.. . .+ ...+.-.....+..+-+.+
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~ 172 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKI 172 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccEECCccCCChHHHHHHHHHh
Confidence 46799999999 45653 367999999999999999988632 22233222 0 11 1111111233344444555
Q ss_pred CCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 159 AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 159 ~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
+.+...+.+.|||.+|+.|...+|- .++||...
T Consensus 173 ~~~~~~~~aY~Ds~~D~pmL~~a~~-~~~vnp~~ 205 (211)
T PRK11590 173 GTPLRLYSGYSDSKQDNPLLYFCQH-RWRVTPRG 205 (211)
T ss_pred CCCcceEEEecCCcccHHHHHhCCC-CEEECccH
Confidence 6677888999999999999999995 56666554
No 88
>PRK10444 UMP phosphatase; Provisional
Probab=99.47 E-value=1.7e-13 Score=104.88 Aligned_cols=62 Identities=19% Similarity=0.248 Sum_probs=53.8
Q ss_pred CchHHHHHH-HHhcCCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC--------CccccccccChhHH
Q 035566 146 GQELQLISM-LRMVAHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNI 207 (238)
Q Consensus 146 ~~~~~~~~~-~~~~~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el 207 (238)
||++.++.. ++.+++++++++||||+. .|+.+|+++|+.++++.+|.. ..+++++++++.+|
T Consensus 174 KP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 174 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 457777775 789999999999999997 899999999999999988752 25689999999887
No 89
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.47 E-value=2.8e-13 Score=107.33 Aligned_cols=101 Identities=17% Similarity=0.203 Sum_probs=83.6
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccc-ccceeeeccc-------CCCCCCCCCchHHHHHH-H
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLED-CFDGIVNFES-------LNPTNKTTGQELQLISM-L 155 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~-~f~~i~~~~~-------~~~~k~~~~~~~~~~~~-~ 155 (238)
..++|++.++++.++.+ .+++|+.+.......++++++.+ +|+.+++.+. .... +|.+.++.. +
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~----kp~p~~~~~~l 261 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDK----RPDDVVKEEIF 261 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCC----CCcHHHHHHHH
Confidence 46789999999888654 57999999999999999999997 8998887762 2233 347776664 7
Q ss_pred HhcCC-CCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 156 RMVAH-HFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 156 ~~~~~-~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
++++. ++++|++|||+.+|+.+|+++|+++++|.+|.
T Consensus 262 ~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 262 WEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred HHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence 88888 67999999999999999999999999998764
No 90
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.47 E-value=6.8e-14 Score=105.47 Aligned_cols=96 Identities=14% Similarity=0.151 Sum_probs=63.8
Q ss_pred EEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEE
Q 035566 107 IFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTV 186 (238)
Q Consensus 107 i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i 186 (238)
+.+......+...++..++..... ........++..+...+..+++.+|++++++++|||+.||++|++.+|+..+
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~~~~~----~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~va 187 (215)
T TIGR01487 112 MREGKDVDEVREIIKERGLNLVDS----GFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVA 187 (215)
T ss_pred ecCCccHHHHHHHHHhCCeEEEec----CceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEE
Confidence 345445556666666655443211 1112222333445777777899999999999999999999999999998655
Q ss_pred EecCCCC-CccccccccChhH
Q 035566 187 LVGTSRR-TKGADYALENIHN 206 (238)
Q Consensus 187 ~v~~~~~-~~~ad~v~~~~~e 206 (238)
+-+..++ +..|++++.+.++
T Consensus 188 m~na~~~~k~~A~~v~~~~~~ 208 (215)
T TIGR01487 188 VANADDQLKEIADYVTSNPYG 208 (215)
T ss_pred cCCccHHHHHhCCEEcCCCCC
Confidence 4444333 6678988876443
No 91
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.47 E-value=2.3e-13 Score=106.29 Aligned_cols=77 Identities=12% Similarity=0.135 Sum_probs=61.0
Q ss_pred CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Cccccc--cccChhH--HHHHh
Q 035566 138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADY--ALENIHN--IREAF 211 (238)
Q Consensus 138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~--v~~~~~e--l~~~l 211 (238)
.....++..|..++..+++.+|++++++++|||+.||++|.+.+|.. +.+.++.+ +..|++ ++.+.+| +...|
T Consensus 180 ~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~-vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 180 LEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRG-FIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCc-eeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 45566666778999999999999999999999999999999999984 55555543 666775 6766655 77777
Q ss_pred HHhh
Q 035566 212 PELW 215 (238)
Q Consensus 212 ~~~~ 215 (238)
.+++
T Consensus 259 ~~~~ 262 (272)
T PRK15126 259 THWL 262 (272)
T ss_pred HHHh
Confidence 7766
No 92
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.46 E-value=2.6e-13 Score=93.48 Aligned_cols=85 Identities=20% Similarity=0.132 Sum_probs=67.1
Q ss_pred CCChhHHHHHhcCCCC---eEEEecC-ChHHHHHHHHhcC-------cccccceeeecccCCCCCCCCCchHHHHHHHHh
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNA-DEIHVAKVLRKLG-------LEDCFDGIVNFESLNPTNKTTGQELQLISMLRM 157 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~-~~~~~~~~l~~~~-------~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~ 157 (238)
+++||+.++|+.++.+ .+++||+ ........++..+ +..+|+.+++++.. | +...+..++++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~----p---kp~~~~~a~~~ 101 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWL----P---KSPRLVEIALK 101 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCC----c---HHHHHHHHHHH
Confidence 5679999999988755 5699999 7888888889888 78889888776532 2 23334456899
Q ss_pred cC--CCCCeEEEEeCCccchhHHHh
Q 035566 158 VA--HHFFQRLFFDDSTRNIECGKS 180 (238)
Q Consensus 158 ~~--~~~~~~v~vgD~~~di~~a~~ 180 (238)
+| ++|++|+||||+..|+...++
T Consensus 102 lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 102 LNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred hcCCCCcceEEEECCCHhHHHHHHh
Confidence 99 999999999999999776654
No 93
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.44 E-value=1e-12 Score=100.43 Aligned_cols=70 Identities=20% Similarity=0.232 Sum_probs=59.3
Q ss_pred CCCchHHHHHH-HHhcCCCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC--------CccccccccChhHHHHHhHH
Q 035566 144 TTGQELQLISM-LRMVAHHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNIREAFPE 213 (238)
Q Consensus 144 ~~~~~~~~~~~-~~~~~~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el~~~l~~ 213 (238)
.+||.+.+++. ++.++.++++++||||+. .||.+|.++||.+++|.+|-. ...++++.+++.++...+..
T Consensus 188 ~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~~~ 267 (269)
T COG0647 188 IGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITALKE 267 (269)
T ss_pred cCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhhhc
Confidence 34568888886 799999999999999996 569999999999999988863 35689999999998876654
No 94
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.43 E-value=1.9e-13 Score=102.98 Aligned_cols=86 Identities=16% Similarity=0.210 Sum_probs=67.1
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHH-HHHHHhcCCCCC
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQL-ISMLRMVAHHFF 163 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~ 163 (238)
.+++|++.++|+.|+.. .+++|+........+.+.+|+.+ .++.+... .|| .+.+ ..+++.++++++
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~---~~v~a~~~--~kP----~~k~~~~~i~~l~~~~~ 196 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD---SIVFARVI--GKP----EPKIFLRIIKELQVKPG 196 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS---EEEEESHE--TTT----HHHHHHHHHHHHTCTGG
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc---cccccccc--ccc----cchhHHHHHHHHhcCCC
Confidence 36789999999998765 46999999999999999999843 22222211 333 5544 446899999999
Q ss_pred eEEEEeCCccchhHHHhcC
Q 035566 164 QRLFFDDSTRNIECGKSIG 182 (238)
Q Consensus 164 ~~v~vgD~~~di~~a~~~G 182 (238)
+++||||+.||+.|++.+|
T Consensus 197 ~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 197 EVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp GEEEEESSGGHHHHHHHSS
T ss_pred EEEEEccCHHHHHHHHhCc
Confidence 9999999999999999987
No 95
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.41 E-value=3.1e-12 Score=99.93 Aligned_cols=72 Identities=11% Similarity=0.087 Sum_probs=54.0
Q ss_pred CchHHHHHHHHhcCCCC-CeEEEEeCCccchhHHHhcCCeEEEecCCCC-C----ccc-cccc--cC--hhHHHHHhHHh
Q 035566 146 GQELQLISMLRMVAHHF-FQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-T----KGA-DYAL--EN--IHNIREAFPEL 214 (238)
Q Consensus 146 ~~~~~~~~~~~~~~~~~-~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~----~~a-d~v~--~~--~~el~~~l~~~ 214 (238)
.+...+..+++.+|+++ +++++|||+.||++|++.+|+.+++-|..++ + ..+ +.++ .+ -+.+.+.|.++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKL 269 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHH
Confidence 45677777899999999 9999999999999999999986665555544 3 333 4666 44 33577778777
Q ss_pred hhc
Q 035566 215 WDA 217 (238)
Q Consensus 215 ~~~ 217 (238)
+..
T Consensus 270 ~~~ 272 (273)
T PRK00192 270 LSK 272 (273)
T ss_pred Hhh
Confidence 653
No 96
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.40 E-value=2.4e-12 Score=100.46 Aligned_cols=80 Identities=13% Similarity=0.148 Sum_probs=60.2
Q ss_pred CCCCCCCCCchHHHHHHHHhcCC---CCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-------CccccccccChh--
Q 035566 138 LNPTNKTTGQELQLISMLRMVAH---HFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-------TKGADYALENIH-- 205 (238)
Q Consensus 138 ~~~~k~~~~~~~~~~~~~~~~~~---~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-------~~~ad~v~~~~~-- 205 (238)
.....++..+..++..+++.+|+ +++++++|||+.||++|.+.+|...++-+...+ +..++++++..+
T Consensus 179 iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (271)
T PRK03669 179 WHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPE 258 (271)
T ss_pred EEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcH
Confidence 34455566678888888999999 999999999999999999999986555433311 235788888766
Q ss_pred HHHHHhHHhhhc
Q 035566 206 NIREAFPELWDA 217 (238)
Q Consensus 206 el~~~l~~~~~~ 217 (238)
.+.+.+..++.+
T Consensus 259 g~~~~l~~~~~~ 270 (271)
T PRK03669 259 GWREGLDHFFSA 270 (271)
T ss_pred HHHHHHHHHHhc
Confidence 477777766543
No 97
>PRK08238 hypothetical protein; Validated
Probab=99.38 E-value=4.3e-12 Score=105.41 Aligned_cols=97 Identities=16% Similarity=0.196 Sum_probs=76.9
Q ss_pred CCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCC
Q 035566 86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHF 162 (238)
Q Consensus 86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 162 (238)
..++.+|++.+.+++++.+ .+++|+++...++.+++++|+ |+.+++++.....++ ++....+.+.++ .
T Consensus 69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg----~~K~~~l~~~l~--~ 139 (479)
T PRK08238 69 ATLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNLKG----AAKAAALVEAFG--E 139 (479)
T ss_pred hhCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccccCC----chHHHHHHHHhC--c
Confidence 4566789999999998765 479999999999999999987 899998887665554 233333445554 3
Q ss_pred CeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
++++++||+.+|+.+++.+| +.+.|+.+.
T Consensus 140 ~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 140 RGFDYAGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred cCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence 56899999999999999999 678887775
No 98
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.35 E-value=2.7e-12 Score=79.91 Aligned_cols=62 Identities=21% Similarity=0.342 Sum_probs=54.5
Q ss_pred CchHHHHHH-HHhcCCCCCeEEEEeCC-ccchhHHHhcCCeEEEecCCCC--------CccccccccChhHH
Q 035566 146 GQELQLISM-LRMVAHHFFQRLFFDDS-TRNIECGKSIGLHTVLVGTSRR--------TKGADYALENIHNI 207 (238)
Q Consensus 146 ~~~~~~~~~-~~~~~~~~~~~v~vgD~-~~di~~a~~~G~~~i~v~~~~~--------~~~ad~v~~~~~el 207 (238)
||.+.++.. ++.++++++++++|||+ ..||.+|+++|+.+++|.+|.. ...||++++++.|+
T Consensus 4 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 4 KPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp TTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 457777775 89999999999999999 9999999999999999988763 35899999999885
No 99
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.35 E-value=4.3e-12 Score=97.35 Aligned_cols=96 Identities=18% Similarity=0.126 Sum_probs=71.6
Q ss_pred ChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCccccccee--eecccCCCCCCCCCchHHHHHH-HHhcCCC-CCe
Q 035566 91 DPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGI--VNFESLNPTNKTTGQELQLISM-LRMVAHH-FFQ 164 (238)
Q Consensus 91 ~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i--~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~-~~~ 164 (238)
++++.++++.+..+ .+++||.+.......+..++...+|..+ .+.+..... ||.+.++.. +++++.. +++
T Consensus 140 ~~~~~~~l~~l~~~g~~~i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~g----KP~~~~~~~~~~~~~~~~~~~ 215 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPNICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSG----KPYPAIFHKALKECSNIPKNR 215 (242)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCEeccCCCceEecccHHHHHHHHhCCcEecCC----CCCHHHHHHHHHHcCCCCccc
Confidence 68888888876543 3588998887776667777777666654 333332333 457777775 7888864 679
Q ss_pred EEEEeCC-ccchhHHHhcCCeEEEecC
Q 035566 165 RLFFDDS-TRNIECGKSIGLHTVLVGT 190 (238)
Q Consensus 165 ~v~vgD~-~~di~~a~~~G~~~i~v~~ 190 (238)
++||||+ .+|+.+|+++|+.+++|.+
T Consensus 216 ~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 216 MLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred EEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 9999999 5999999999999999853
No 100
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.34 E-value=9e-12 Score=86.38 Aligned_cols=87 Identities=25% Similarity=0.291 Sum_probs=67.2
Q ss_pred hhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEE
Q 035566 92 PVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFF 168 (238)
Q Consensus 92 ~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~v 168 (238)
|.+++.+..++.+ .+|+||+.+..+....+.+|+. .++ ...|| ....+.++++.+++++++|+||
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~-----~A~KP---~~~~fr~Al~~m~l~~~~vvmV 116 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FIY-----RAKKP---FGRAFRRALKEMNLPPEEVVMV 116 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eee-----cccCc---cHHHHHHHHHHcCCChhHEEEE
Confidence 4455555555544 5799999999999999998864 332 23344 4566777899999999999999
Q ss_pred eCCc-cchhHHHhcCCeEEEecC
Q 035566 169 DDST-RNIECGKSIGLHTVLVGT 190 (238)
Q Consensus 169 gD~~-~di~~a~~~G~~~i~v~~ 190 (238)
||.. .|+.++..+|+++|+|-.
T Consensus 117 GDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 117 GDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred cchhhhhhhcccccCcEEEEEEE
Confidence 9995 679999999999999954
No 101
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.34 E-value=7e-11 Score=88.76 Aligned_cols=118 Identities=18% Similarity=0.269 Sum_probs=80.2
Q ss_pred CCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCC--CC---eEEEecCChHHHHHHHHhcCcccccceeeecccCC----
Q 035566 69 DFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLP--IR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLN---- 139 (238)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~--~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~---- 139 (238)
+.+.+++.+.+ ..+++.||+.++++.+. .. .+|+|++....++.++++.|+...|+.+++....-
T Consensus 57 gvt~~~I~~~l------~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G 130 (234)
T PF06888_consen 57 GVTPEDIRDAL------RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG 130 (234)
T ss_pred CCCHHHHHHHH------HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc
Confidence 35566666555 34678899999999883 22 57999999999999999999999988877643210
Q ss_pred ----------CCCCCC---CchHHHHHHHHh---cCCCCCeEEEEeCCccchhHHHhcCCeEEE-ecCCC
Q 035566 140 ----------PTNKTT---GQELQLISMLRM---VAHHFFQRLFFDDSTRNIECGKSIGLHTVL-VGTSR 192 (238)
Q Consensus 140 ----------~~k~~~---~~~~~~~~~~~~---~~~~~~~~v~vgD~~~di~~a~~~G~~~i~-v~~~~ 192 (238)
..+..+ =+...+.++.+. -|.+-++++||||+.||+-++.+.+-.-+. ...+.
T Consensus 131 ~l~v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~ 200 (234)
T PF06888_consen 131 RLRVRPYHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGY 200 (234)
T ss_pred eEEEeCccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCC
Confidence 011111 112223334333 367779999999999999999987765444 44443
No 102
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.32 E-value=1.8e-12 Score=88.72 Aligned_cols=115 Identities=18% Similarity=0.264 Sum_probs=84.4
Q ss_pred HHHHhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccc
Q 035566 95 RNLLLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRN 174 (238)
Q Consensus 95 ~~~l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~d 174 (238)
.++|..+..+.+|+|+..+..++...+.+|+..+|-. .. ++...+.++++++++.++++.++||-.+|
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG---~~---------dK~~a~~~L~~~~~l~~e~~ayiGDD~~D 111 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQG---IS---------DKLAAFEELLKKLNLDPEEVAYVGDDLVD 111 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeec---hH---------hHHHHHHHHHHHhCCCHHHhhhhcCcccc
Confidence 4567777889999999999999999999998744322 12 13566667899999999999999999999
Q ss_pred hhHHHhcCCeEEEecCCCC-CccccccccChh---HHHHHhHHhhhccccc
Q 035566 175 IECGKSIGLHTVLVGTSRR-TKGADYALENIH---NIREAFPELWDADEIS 221 (238)
Q Consensus 175 i~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~---el~~~l~~~~~~~~~~ 221 (238)
+.....+|.+++..+..+. +..+++|+..-. .++++..-++++.+..
T Consensus 112 lpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~ 162 (170)
T COG1778 112 LPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKL 162 (170)
T ss_pred HHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcH
Confidence 9999999997655444433 667888876422 1444444445555443
No 103
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.32 E-value=1.7e-12 Score=91.88 Aligned_cols=92 Identities=13% Similarity=0.075 Sum_probs=79.3
Q ss_pred CCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCccc-ccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566 88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLED-CFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ 164 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~-~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 164 (238)
..++||+.++|+.++.. .+|+|++...+++.+++++++.. +|+.++++++....|| . +.+.++.+|.+|++
T Consensus 44 v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP----~--~~k~l~~l~~~p~~ 117 (148)
T smart00577 44 VKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKG----K--YVKDLSLLGRDLSN 117 (148)
T ss_pred EEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCC----e--EeecHHHcCCChhc
Confidence 56789999999999743 67999999999999999999865 5688999888887776 3 55568999999999
Q ss_pred EEEEeCCccchhHHHhcCCeE
Q 035566 165 RLFFDDSTRNIECGKSIGLHT 185 (238)
Q Consensus 165 ~v~vgD~~~di~~a~~~G~~~ 185 (238)
|++|||+.+|+.++..+|+..
T Consensus 118 ~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 118 VIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred EEEEECCHHHhhcCccCEEEe
Confidence 999999999999999998754
No 104
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.30 E-value=9.6e-11 Score=82.21 Aligned_cols=190 Identities=13% Similarity=0.112 Sum_probs=111.1
Q ss_pred CCceeEEEEecCCceeeCc---cchhhHHHHHHHHHHHHHhCCChhHHHHHHHHHHHhhccch--hhhhh-------ccC
Q 035566 1 MTKYECLLFDVDDTLYSHS---YGFSNKCSKNIEEYMIQKLGIEESEVSEFNRVLYKNYGTSM--AGLKA-------VGY 68 (238)
Q Consensus 1 M~~~k~vifD~DGTL~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~ 68 (238)
|.+.|++++|+.||..+-+ +.++.-..+.+.+|..+..+-+.. ..+........|... +.+.. .+.
T Consensus 1 m~m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~v--~~~v~~v~~e~g~~~s~E~lva~~~~wiaed~ 78 (229)
T COG4229 1 MVMVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEV--KKIVDEVLSEFGIANSEEALVALLLEWIAEDS 78 (229)
T ss_pred CcchhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCChh--hHHHHHHHHHhCccchHHHHHHHHHHHHhccc
Confidence 6677999999999998853 234445555566655555443321 111122222333222 11110 011
Q ss_pred C-CChHh----HHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhc---Ccccccceeeeccc
Q 035566 69 D-FDNDD----YHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKL---GLEDCFDGIVNFES 137 (238)
Q Consensus 69 ~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~---~~~~~f~~i~~~~~ 137 (238)
. ..... .+..-.+.-. -..+.||++.+.+++++.. .+|.|++.-..+.-...+. .+..+|+.++...
T Consensus 79 K~t~lK~lQG~iWa~Gy~sge-lkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtt- 156 (229)
T COG4229 79 KDTPLKALQGMIWAHGYESGE-LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTT- 156 (229)
T ss_pred ccchHHHHHhHHHHhccccCc-cccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeecc-
Confidence 0 11111 1111111110 1246799999999988755 5788888766665555543 3445666655432
Q ss_pred CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCcccc
Q 035566 138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGAD 198 (238)
Q Consensus 138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad 198 (238)
..++ .....+.++++..|++|.+++|..|.++.+.+|+.+|++++++.+....+.+|
T Consensus 157 --iG~K--rE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d 213 (229)
T COG4229 157 --IGKK--RESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPD 213 (229)
T ss_pred --cccc--ccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCC
Confidence 1111 12333455789999999999999999999999999999999987766544444
No 105
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.29 E-value=2.7e-10 Score=85.22 Aligned_cols=103 Identities=8% Similarity=-0.071 Sum_probs=66.4
Q ss_pred CCCChhHHHHHh-cCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecc----cCCC-CCCCCCchHHHHHHHHhc
Q 035566 88 LKPDPVLRNLLL-SLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFE----SLNP-TNKTTGQELQLISMLRMV 158 (238)
Q Consensus 88 ~~~~~~~~~~l~-~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~----~~~~-~k~~~~~~~~~~~~~~~~ 158 (238)
..++|++.+.|+ +++. ..+|+|+++...++.+.+..++..- +.+++.. +.+. ..+.-.....+..+.+.+
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~ 171 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKI 171 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeEEeCCceEcCccCCChHHHHHHHHHh
Confidence 357899999995 5553 3679999999999999988655332 2222221 1111 111111233344444455
Q ss_pred CCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 159 AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 159 ~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
+.+.+.+.+.|||.+|+.|...+|- .+.|+...
T Consensus 172 ~~~~~~~~aYsDS~~D~pmL~~a~~-~~~Vnp~~ 204 (210)
T TIGR01545 172 GSPLKLYSGYSDSKQDNPLLAFCEH-RWRVSKRG 204 (210)
T ss_pred CCChhheEEecCCcccHHHHHhCCC-cEEECcch
Confidence 6566788999999999999999995 56665543
No 106
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.28 E-value=2.5e-10 Score=87.71 Aligned_cols=110 Identities=13% Similarity=0.120 Sum_probs=77.2
Q ss_pred CCCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccccee------eecccC
Q 035566 68 YDFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGI------VNFESL 138 (238)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i------~~~~~~ 138 (238)
..++.+...+.+.+ ..+++.||+.++++.|+.. .+|+|++....++.+++++|+...+..+ +..+..
T Consensus 104 ~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGv 179 (277)
T TIGR01544 104 QAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGV 179 (277)
T ss_pred CCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCe
Confidence 44445555544432 3478899999999988654 6799999999999999999986555444 222222
Q ss_pred CCCCCCC-----CchHHHHH-HHHhcC--CCCCeEEEEeCCccchhHHHhc
Q 035566 139 NPTNKTT-----GQELQLIS-MLRMVA--HHFFQRLFFDDSTRNIECGKSI 181 (238)
Q Consensus 139 ~~~k~~~-----~~~~~~~~-~~~~~~--~~~~~~v~vgD~~~di~~a~~~ 181 (238)
-..++.+ .+...+++ .++.++ .++++|++||||.+|+.||..+
T Consensus 180 ltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 180 LKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred EeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 1122211 33446665 578888 8999999999999999998776
No 107
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.26 E-value=1.5e-11 Score=97.96 Aligned_cols=86 Identities=17% Similarity=0.084 Sum_probs=71.4
Q ss_pred CChhHHHHHhcCCCC---eEEEecCChHHHHHHHHh----cCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCC
Q 035566 90 PDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRK----LGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHF 162 (238)
Q Consensus 90 ~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~----~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 162 (238)
+++++.++|+.|+.+ .+|+|+++...+..++++ +++.++|+.+... .+| ++..+..+++++|+++
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-----~~p---k~~~i~~~~~~l~i~~ 103 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-----WGP---KSESLRKIAKKLNLGT 103 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-----cCc---hHHHHHHHHHHhCCCc
Confidence 468888999888766 469999999999999999 8888899887554 233 3555666789999999
Q ss_pred CeEEEEeCCccchhHHHhcCC
Q 035566 163 FQRLFFDDSTRNIECGKSIGL 183 (238)
Q Consensus 163 ~~~v~vgD~~~di~~a~~~G~ 183 (238)
++++||||++.|+.+++.++-
T Consensus 104 ~~~vfidD~~~d~~~~~~~lp 124 (320)
T TIGR01686 104 DSFLFIDDNPAERANVKITLP 124 (320)
T ss_pred CcEEEECCCHHHHHHHHHHCC
Confidence 999999999999999999764
No 108
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.26 E-value=1e-11 Score=96.22 Aligned_cols=69 Identities=17% Similarity=0.215 Sum_probs=54.2
Q ss_pred CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-CccccccccChhH
Q 035566 138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-TKGADYALENIHN 206 (238)
Q Consensus 138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-~~~ad~v~~~~~e 206 (238)
.....++..|..++..+++.+|++++++++|||+.||++|++.+|+..++.+.... +..|++++.+.++
T Consensus 180 leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 180 IEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNE 249 (256)
T ss_pred EEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCC
Confidence 44555556678888889999999999999999999999999999986555443332 6668888877654
No 109
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.24 E-value=2.3e-10 Score=90.66 Aligned_cols=103 Identities=19% Similarity=0.183 Sum_probs=77.4
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhc-C-------cccccceeeecccCC-----------------
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKL-G-------LEDCFDGIVNFESLN----------------- 139 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~-~-------~~~~f~~i~~~~~~~----------------- 139 (238)
+.+.|++.++|+.++.+ .+|+||++...++.+++.+ | +.++||.+++.....
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g 262 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETG 262 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCC
Confidence 45589999999888654 6899999999999999996 7 889999988765411
Q ss_pred CCCCCC----Cch-----HHHHHHHHhcCCCCCeEEEEeCCc-cchhHHH-hcCCeEEEecC
Q 035566 140 PTNKTT----GQE-----LQLISMLRMVAHHFFQRLFFDDST-RNIECGK-SIGLHTVLVGT 190 (238)
Q Consensus 140 ~~k~~~----~~~-----~~~~~~~~~~~~~~~~~v~vgD~~-~di~~a~-~~G~~~i~v~~ 190 (238)
..++.. .+. .....+.+.+|++++++++|||++ .|+..++ .+||.++++..
T Consensus 263 ~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 263 SLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred cccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 111110 001 223445688899999999999996 5688887 89999999855
No 110
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.24 E-value=5e-10 Score=80.32 Aligned_cols=115 Identities=17% Similarity=0.265 Sum_probs=77.5
Q ss_pred hhHHHHHhcCC---CCeEEEecCC---------------hHHHHHHHHhcCcccccceeeecccCCCC-CCCCCchHHHH
Q 035566 92 PVLRNLLLSLP---IRKVIFSNAD---------------EIHVAKVLRKLGLEDCFDGIVNFESLNPT-NKTTGQELQLI 152 (238)
Q Consensus 92 ~~~~~~l~~l~---~~~~i~t~~~---------------~~~~~~~l~~~~~~~~f~~i~~~~~~~~~-k~~~~~~~~~~ 152 (238)
|++.+.|..++ .+.+++||.+ ...+...++..|. .|+.++.|.+.... =...||.+.++
T Consensus 34 ~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~gm~ 111 (181)
T COG0241 34 PGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKPGML 111 (181)
T ss_pred ccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCChHHH
Confidence 55555555553 3456777731 1223344555555 48888887754331 12223466655
Q ss_pred H-HHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC-----CccccccccChhHHH
Q 035566 153 S-MLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR-----TKGADYALENIHNIR 208 (238)
Q Consensus 153 ~-~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~-----~~~ad~v~~~~~el~ 208 (238)
. +++++++++.+.++|||+..|+++|.++|+..+.+.++.. ....+.+.+++.++.
T Consensus 112 ~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 112 LSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred HHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 5 6999999999999999999999999999999888866653 224567777877776
No 111
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.23 E-value=1.4e-10 Score=82.30 Aligned_cols=120 Identities=14% Similarity=0.235 Sum_probs=76.8
Q ss_pred CCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccc--ccce---------eeecccCCCCCCCCCchHHH
Q 035566 86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLED--CFDG---------IVNFESLNPTNKTTGQELQL 151 (238)
Q Consensus 86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~--~f~~---------i~~~~~~~~~k~~~~~~~~~ 151 (238)
...+.-||++++.+.|+.+ .+++|++....+.++...+|+.. .+-. +.+.+..+....++.+...+
T Consensus 85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 3456779999999888755 68999999999999999999874 2211 22222223222233344444
Q ss_pred HHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC----CCccccccccChhHHH
Q 035566 152 ISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR----RTKGADYALENIHNIR 208 (238)
Q Consensus 152 ~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~----~~~~ad~v~~~~~el~ 208 (238)
..+.+ +.+-+.++||||+.+|++|..-+ .-.++.+.-. -+..+++.+.++..|.
T Consensus 165 ~~lrk--~~~~~~~~mvGDGatDlea~~pa-~afi~~~g~~~r~~vk~nak~~~~~f~~L~ 222 (227)
T KOG1615|consen 165 ALLRK--NYNYKTIVMVGDGATDLEAMPPA-DAFIGFGGNVIREGVKANAKWYVTDFYVLG 222 (227)
T ss_pred HHHHh--CCChheeEEecCCccccccCCch-hhhhccCCceEcHhhHhccHHHHHHHHHHc
Confidence 44444 77779999999999998877663 2233222211 2556666666666553
No 112
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.18 E-value=4.7e-11 Score=85.19 Aligned_cols=98 Identities=23% Similarity=0.361 Sum_probs=69.1
Q ss_pred CCCCChhHHHHHhcCCCC---eEEEec-CChHHHHHHHHhcCcc----------cccceeeecccCCCCCCCCCchHHHH
Q 035566 87 NLKPDPVLRNLLLSLPIR---KVIFSN-ADEIHVAKVLRKLGLE----------DCFDGIVNFESLNPTNKTTGQELQLI 152 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~---~~i~t~-~~~~~~~~~l~~~~~~----------~~f~~i~~~~~~~~~k~~~~~~~~~~ 152 (238)
.+..+|++.+.|+.|+.+ .+++|. ..+..+...|+.+++. ++|+..-.... ++...+.
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g--------sK~~Hf~ 114 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPG--------SKTTHFR 114 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS---------HHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecC--------chHHHHH
Confidence 467889999999888755 567884 4567899999999999 77776433321 3577888
Q ss_pred HHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 153 SMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 153 ~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
.+.++.|++.++.+||+|..+++......|+.++++.+|-
T Consensus 115 ~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Gl 154 (169)
T PF12689_consen 115 RIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGL 154 (169)
T ss_dssp HHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS-
T ss_pred HHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCC
Confidence 8889999999999999999999999999999999998863
No 113
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=99.18 E-value=8.8e-11 Score=93.61 Aligned_cols=67 Identities=10% Similarity=0.126 Sum_probs=53.2
Q ss_pred CCchHHHHHH-HHhc--------CC-----CCCeEEEEeCCc-cchhHHHhcCCeEEEecCCCC-------Ccccccccc
Q 035566 145 TGQELQLISM-LRMV--------AH-----HFFQRLFFDDST-RNIECGKSIGLHTVLVGTSRR-------TKGADYALE 202 (238)
Q Consensus 145 ~~~~~~~~~~-~~~~--------~~-----~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~~-------~~~ad~v~~ 202 (238)
+||.+.+++. ++.+ +. ++++++||||++ .||.+|+++||.+++|.+|.. ...++++++
T Consensus 232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~vv~ 311 (321)
T TIGR01456 232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLIVN 311 (321)
T ss_pred CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEEEC
Confidence 5678888886 4455 33 457999999998 899999999999999988631 235789999
Q ss_pred ChhHHHHHh
Q 035566 203 NIHNIREAF 211 (238)
Q Consensus 203 ~~~el~~~l 211 (238)
++.|+...|
T Consensus 312 ~l~e~~~~i 320 (321)
T TIGR01456 312 DVFDAVTKI 320 (321)
T ss_pred CHHHHHHHh
Confidence 999987654
No 114
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.16 E-value=2.2e-10 Score=86.73 Aligned_cols=43 Identities=7% Similarity=-0.023 Sum_probs=36.9
Q ss_pred CCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEE
Q 035566 144 TTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTV 186 (238)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i 186 (238)
+..+..++..+++.+|++++++++|||+.||++|.+.+|...+
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 3345667777899999999999999999999999999997544
No 115
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=99.14 E-value=4.1e-10 Score=85.68 Aligned_cols=121 Identities=15% Similarity=0.100 Sum_probs=76.6
Q ss_pred ChhHHHHHhcCCCCe--EEEecCChHHH-HHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCCeEE
Q 035566 91 DPVLRNLLLSLPIRK--VIFSNADEIHV-AKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFFQRL 166 (238)
Q Consensus 91 ~~~~~~~l~~l~~~~--~i~t~~~~~~~-~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~~v 166 (238)
|+.+...++.|+..+ ++.||.+...- .......|-..+...+..+.. ....-.+||.+.+... .++.+++|++++
T Consensus 167 y~KL~kA~~yLqnP~clflatn~D~~~p~~~~~~ipG~G~~v~av~~~t~-R~P~v~GKP~~~m~~~l~~~~~i~psRt~ 245 (306)
T KOG2882|consen 167 YPKLMKALNYLQNPGCLFLATNRDATTPPTPGVEIPGAGSFVAAVKFATG-RQPIVLGKPSTFMFEYLLEKFNIDPSRTC 245 (306)
T ss_pred HHHHHHHHHHhCCCCcEEEeccCccccCCCCCeeccCCccHHHHHHHHhc-CCCeecCCCCHHHHHHHHHHcCCCcceEE
Confidence 455666677777653 46666543211 111112222223333322221 1112234567777775 899999999999
Q ss_pred EEeCCccc-hhHHHhcCCeEEEecCCCC------------CccccccccChhHHHHHhH
Q 035566 167 FFDDSTRN-IECGKSIGLHTVLVGTSRR------------TKGADYALENIHNIREAFP 212 (238)
Q Consensus 167 ~vgD~~~d-i~~a~~~G~~~i~v~~~~~------------~~~ad~v~~~~~el~~~l~ 212 (238)
||||+.+. |..++.+|++++++.+|.. +..|||.++++.++.+.++
T Consensus 246 mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~~~ 304 (306)
T KOG2882|consen 246 MVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLPLLN 304 (306)
T ss_pred EEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhhhcc
Confidence 99999764 9999999999999977752 3458888888888776543
No 116
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.11 E-value=1.3e-10 Score=88.73 Aligned_cols=46 Identities=22% Similarity=0.268 Sum_probs=40.0
Q ss_pred CchHHHHHH-HHhcCCCCCeE-EEEeCCc-cchhHHHhcCCeEEEecCC
Q 035566 146 GQELQLISM-LRMVAHHFFQR-LFFDDST-RNIECGKSIGLHTVLVGTS 191 (238)
Q Consensus 146 ~~~~~~~~~-~~~~~~~~~~~-v~vgD~~-~di~~a~~~G~~~i~v~~~ 191 (238)
||++.+++. +++++++++++ +||||+. .|+.+|+++|+.+++|.+|
T Consensus 188 KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 188 KPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred CCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 457777775 78999988887 9999998 7999999999999999764
No 117
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.09 E-value=1.4e-10 Score=89.31 Aligned_cols=65 Identities=23% Similarity=0.265 Sum_probs=52.4
Q ss_pred CCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhH
Q 035566 141 TNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHN 206 (238)
Q Consensus 141 ~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~e 206 (238)
..+...+..++..+++.+|++++++++|||+.||++|.+.+|.. +.+.++.+ +..|++++++..+
T Consensus 181 ~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~-~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 181 TPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYS-VAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp EETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEE-EEETTS-HHHHHHSSEEESSGTC
T ss_pred eeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeE-EEEcCCCHHHHHhCCEEecCCCC
Confidence 33444568888888999999999999999999999999999975 55555543 6778888888776
No 118
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=99.09 E-value=4.8e-10 Score=80.54 Aligned_cols=68 Identities=12% Similarity=0.197 Sum_probs=56.4
Q ss_pred CchHHHHHH-HHhcCCCCCeEEEEeCCccc-hhHHHhcCCeEEEecCCC--------CCccccccccChhHHHHHhHH
Q 035566 146 GQELQLISM-LRMVAHHFFQRLFFDDSTRN-IECGKSIGLHTVLVGTSR--------RTKGADYALENIHNIREAFPE 213 (238)
Q Consensus 146 ~~~~~~~~~-~~~~~~~~~~~v~vgD~~~d-i~~a~~~G~~~i~v~~~~--------~~~~ad~v~~~~~el~~~l~~ 213 (238)
||.+.+|+- ++.+|++|+++|||||..+| +-.|+++||..+.|.+|. ....||...+++.|..++|-|
T Consensus 181 KP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I~q 258 (262)
T KOG3040|consen 181 KPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLIIQ 258 (262)
T ss_pred CCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHHHh
Confidence 457777774 89999999999999999888 999999999999997764 145678888888888777644
No 119
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.08 E-value=7.1e-10 Score=92.78 Aligned_cols=88 Identities=17% Similarity=0.167 Sum_probs=66.7
Q ss_pred CChhHHHHHhcCCCC---eEEEecCCh------------HHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH
Q 035566 90 PDPVLRNLLLSLPIR---KVIFSNADE------------IHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM 154 (238)
Q Consensus 90 ~~~~~~~~l~~l~~~---~~i~t~~~~------------~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~ 154 (238)
++||+.+.|+.|+.. .+|+||... ..+..+++.+|+. |+.+++.......|| .++++..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~RKP----~pGm~~~ 271 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYRKP----LTGMWDH 271 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCCCC----CHHHHHH
Confidence 457888888888654 679999765 3577888998885 887776665556665 6666664
Q ss_pred -HHhcC----CCCCeEEEEeCCccchhHHHhcCC
Q 035566 155 -LRMVA----HHFFQRLFFDDSTRNIECGKSIGL 183 (238)
Q Consensus 155 -~~~~~----~~~~~~v~vgD~~~di~~a~~~G~ 183 (238)
++.++ +++++++||||+..|+.+++.+|-
T Consensus 272 a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 272 LKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred HHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 67774 899999999999999888777664
No 120
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.06 E-value=5e-09 Score=81.15 Aligned_cols=72 Identities=14% Similarity=0.122 Sum_probs=52.6
Q ss_pred CCCCchHHHHHHHHhcCCC--CCeEEEEeCCccchhHHHhcCCeEEEecCCC---C-Ccc--c-cccccChhH--HHHHh
Q 035566 143 KTTGQELQLISMLRMVAHH--FFQRLFFDDSTRNIECGKSIGLHTVLVGTSR---R-TKG--A-DYALENIHN--IREAF 211 (238)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~--~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~---~-~~~--a-d~v~~~~~e--l~~~l 211 (238)
+...+..++..+++.+|++ ++++++|||+.||+.|.+.+|...++-+..+ + +.. | ++++.+..+ +.+.|
T Consensus 173 ~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l 252 (256)
T TIGR01486 173 AGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREAL 252 (256)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHH
Confidence 3345577788889999999 9999999999999999999998655555542 2 443 3 478866444 66655
Q ss_pred HHh
Q 035566 212 PEL 214 (238)
Q Consensus 212 ~~~ 214 (238)
.++
T Consensus 253 ~~~ 255 (256)
T TIGR01486 253 EHL 255 (256)
T ss_pred HHh
Confidence 543
No 121
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=99.03 E-value=2.8e-10 Score=84.13 Aligned_cols=172 Identities=16% Similarity=0.206 Sum_probs=88.7
Q ss_pred eE-EEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHH-HHHHH-HHHHhhccchhhhhhccCCCChHhHHHhhhC
Q 035566 5 EC-LLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEV-SEFNR-VLYKNYGTSMAGLKAVGYDFDNDDYHSFVHG 81 (238)
Q Consensus 5 k~-vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (238)
++ |++||||||.|.... +.+++.+.++.+.... ..+.. .....+|.... ...+.+...+..
T Consensus 2 ~i~I~iDiDgVLad~~~~--------~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~~~--------e~~~~~~~~~~~ 65 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFNSA--------FIEWFNEEFGKNPELTPEDITGYWDWEKWGITEP--------EFYEKLWRFYEE 65 (191)
T ss_dssp -EEEEEESBTTTB-HHHH--------HHHHHHHHTTTS----GGGGTSSSHHHHHHHHST--------THHHHHHHHHTS
T ss_pred CcEEEEECCCCCcccHHH--------HHHHHHHHcCCCCCCCHHHhhhhhHHHHhCCCCH--------HHHHHHHHHHhC
Confidence 35 899999999994222 2234455566552110 00000 01112221111 112334444444
Q ss_pred CCCCCCCCCChhHHHHHhcCCCC---eEEEecCChH-------HHHHHH-HhcCcccccceeeecccCCCCCCCCCchHH
Q 035566 82 RLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEI-------HVAKVL-RKLGLEDCFDGIVNFESLNPTNKTTGQELQ 150 (238)
Q Consensus 82 ~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~-------~~~~~l-~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~ 150 (238)
.-....++|.||+.+.|+.|... .+++|..+.. ....-+ +++|.. .++.++.+.. | .
T Consensus 66 ~~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i-~~~~~~~~~~----K-----~-- 133 (191)
T PF06941_consen 66 PGFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFI-PYDNLIFTGD----K-----T-- 133 (191)
T ss_dssp TTTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHH-HHCCEEEESS----G-----G--
T ss_pred hhhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCC-chheEEEecC----C-----C--
Confidence 34446789999999999999765 4566665433 222223 333322 2233443321 1 1
Q ss_pred HHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCcc-ccccccChhHHHHHhHHh
Q 035566 151 LISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKG-ADYALENIHNIREAFPEL 214 (238)
Q Consensus 151 ~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~-ad~v~~~~~el~~~l~~~ 214 (238)
.++.+ ++|+|++.++..+...|++++++.++.+... .-..+.++.|+.+.+-..
T Consensus 134 ------~v~~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv~~W~ei~~~i~~~ 188 (191)
T PF06941_consen 134 ------LVGGD----VLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPRVNNWEEIEDLILSS 188 (191)
T ss_dssp ------GC--S----EEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEEE-STTSHHHHHHHT
T ss_pred ------eEecc----EEecCChHHHHhccCCCceEEEEcCCCCCCCCCCccCCCHHHHHHHHHhc
Confidence 23333 8999999999999999999999988775333 467889999998877543
No 122
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.02 E-value=1.3e-08 Score=73.96 Aligned_cols=143 Identities=11% Similarity=0.123 Sum_probs=88.7
Q ss_pred CCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC----eEEEecCChHHHHHHHHhcCcccccceeeecccC----CC
Q 035566 69 DFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR----KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL----NP 140 (238)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~----~~ 140 (238)
....++..+.+ ..++..||+.++++.++.. +.|+|++....++.+++++|+.++|..|++.... +.
T Consensus 70 gv~~~~ik~~~------r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~ 143 (256)
T KOG3120|consen 70 GVRIAEIKQVL------RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGR 143 (256)
T ss_pred CCCHHHHHHHH------hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCc
Confidence 34455555544 3367889999999988765 4599999999999999999999999887764321 10
Q ss_pred CC--CCC------------CchHHHHHH-H--HhcCCCCCeEEEEeCCccchhHHHhc-CCeEEEecCCCC---------
Q 035566 141 TN--KTT------------GQELQLISM-L--RMVAHHFFQRLFFDDSTRNIECGKSI-GLHTVLVGTSRR--------- 193 (238)
Q Consensus 141 ~k--~~~------------~~~~~~~~~-~--~~~~~~~~~~v~vgD~~~di~~a~~~-G~~~i~v~~~~~--------- 193 (238)
.. |-. =+..-+-++ + .+-|+.-++.+|+||+-||+...... +...++...+.+
T Consensus 144 L~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p 223 (256)
T KOG3120|consen 144 LLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKLISANP 223 (256)
T ss_pred EEeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhhhhcCc
Confidence 00 100 011112222 2 34467778999999999996655544 445555555553
Q ss_pred -Ccccc-ccccChhHHHHHhHHhhhc
Q 035566 194 -TKGAD-YALENIHNIREAFPELWDA 217 (238)
Q Consensus 194 -~~~ad-~v~~~~~el~~~l~~~~~~ 217 (238)
.-.|. ....+=.|+..++.++.+.
T Consensus 224 ~~~kasV~~W~sg~d~~~~L~~lik~ 249 (256)
T KOG3120|consen 224 MLLKASVLEWSSGEDLERILQQLIKT 249 (256)
T ss_pred ceeeeeEEecccHHHHHHHHHHHHHH
Confidence 11122 3345566666666665443
No 123
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.99 E-value=3.1e-09 Score=81.30 Aligned_cols=72 Identities=22% Similarity=0.151 Sum_probs=51.4
Q ss_pred CCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccc----ccccChh--HHHHHhH
Q 035566 141 TNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGAD----YALENIH--NIREAFP 212 (238)
Q Consensus 141 ~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad----~v~~~~~--el~~~l~ 212 (238)
..++..+...+..+++++|++++++++|||+.||+.|++.+|.. +.+.+..+ +..++ +++.+.. .+.+.|.
T Consensus 154 ~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~-iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 154 LPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLG-VVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred eeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcE-EEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 33333456667667899999999999999999999999999975 55655543 55566 6666533 2555554
Q ss_pred H
Q 035566 213 E 213 (238)
Q Consensus 213 ~ 213 (238)
.
T Consensus 233 ~ 233 (236)
T TIGR02471 233 H 233 (236)
T ss_pred h
Confidence 3
No 124
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.96 E-value=5.9e-09 Score=80.39 Aligned_cols=53 Identities=23% Similarity=0.217 Sum_probs=42.9
Q ss_pred CCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566 141 TNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR 193 (238)
Q Consensus 141 ~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~ 193 (238)
..+...+..++..+++.+|++++++++|||+.||+.|++.++..++++.++.+
T Consensus 162 ~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~ 214 (249)
T TIGR01485 162 LPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQE 214 (249)
T ss_pred EeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHH
Confidence 33444567777777999999999999999999999999997666788877653
No 125
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.96 E-value=8.8e-09 Score=79.99 Aligned_cols=79 Identities=14% Similarity=0.154 Sum_probs=63.1
Q ss_pred CCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhc---CCeEEEecCCCCCccccccccChhHHHHHhHHhh
Q 035566 139 NPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSI---GLHTVLVGTSRRTKGADYALENIHNIREAFPELW 215 (238)
Q Consensus 139 ~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~---G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~ 215 (238)
....++..|...+..+++.+|++.+++++|||+.||+.|.+.+ +-.+|.|+++ ...|++.+++..++..+|..+.
T Consensus 167 Ei~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a--~~~A~~~l~~~~~v~~~L~~l~ 244 (266)
T PRK10187 167 EIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG--ATQASWRLAGVPDVWSWLEMIT 244 (266)
T ss_pred EeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC--CCcCeEeCCCHHHHHHHHHHHH
Confidence 3344455678888888999999999999999999999999988 2346677654 3678999999999999988877
Q ss_pred hccc
Q 035566 216 DADE 219 (238)
Q Consensus 216 ~~~~ 219 (238)
....
T Consensus 245 ~~~~ 248 (266)
T PRK10187 245 TAQQ 248 (266)
T ss_pred Hhhh
Confidence 5544
No 126
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.95 E-value=8.5e-09 Score=79.25 Aligned_cols=82 Identities=16% Similarity=0.138 Sum_probs=55.1
Q ss_pred CCCCChhHHHHHhcCCCC---eEEEecCChH---HHHHHHHhcCccccc-ceeeecccCCCCCCCCCchHHHHHHHHhcC
Q 035566 87 NLKPDPVLRNLLLSLPIR---KVIFSNADEI---HVAKVLRKLGLEDCF-DGIVNFESLNPTNKTTGQELQLISMLRMVA 159 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~---~~~~~l~~~~~~~~f-~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~ 159 (238)
..+++||+.++|+.++.+ .+++||+... .+...++.+|+...+ +.++..+. .. + +......+.+.++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~-~~--~---K~~rr~~I~~~y~ 189 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD-KS--S---KESRRQKVQKDYE 189 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC-CC--C---cHHHHHHHHhcCC
Confidence 357889999999987544 6799997643 344777888987644 44554432 11 1 2444444556666
Q ss_pred CCCCeEEEEeCCccchhHH
Q 035566 160 HHFFQRLFFDDSTRNIECG 178 (238)
Q Consensus 160 ~~~~~~v~vgD~~~di~~a 178 (238)
+ +++|||+.+|+..+
T Consensus 190 I----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 190 I----VLLFGDNLLDFDDF 204 (266)
T ss_pred E----EEEECCCHHHhhhh
Confidence 6 89999999998654
No 127
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.95 E-value=1.3e-09 Score=80.68 Aligned_cols=85 Identities=18% Similarity=0.225 Sum_probs=54.6
Q ss_pred hhHHHHHhcCC---CCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCC--------CCC--CCchHHHHHH---H
Q 035566 92 PVLRNLLLSLP---IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPT--------NKT--TGQELQLISM---L 155 (238)
Q Consensus 92 ~~~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~--------k~~--~~~~~~~~~~---~ 155 (238)
|++.++++.++ .+.+|+|+++...+..+++.+|+.... +++....... -+. +.+...+..+ .
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~ 169 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRD 169 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHh
Confidence 56668887764 447899999999999999999887421 1111110000 000 0023334334 2
Q ss_pred HhcCCCCCeEEEEeCCccchhHHH
Q 035566 156 RMVAHHFFQRLFFDDSTRNIECGK 179 (238)
Q Consensus 156 ~~~~~~~~~~v~vgD~~~di~~a~ 179 (238)
.. +.+...+++||||.+|+.|++
T Consensus 170 ~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 170 EE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HH-THTCCEEEEEESSGGGHHHHH
T ss_pred hc-CCCCCeEEEEECCHHHHHHhC
Confidence 33 788899999999999999985
No 128
>PTZ00445 p36-lilke protein; Provisional
Probab=98.88 E-value=8.5e-09 Score=75.14 Aligned_cols=46 Identities=15% Similarity=0.026 Sum_probs=40.0
Q ss_pred chHHH--H---HHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 147 QELQL--I---SMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 147 ~~~~~--~---~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
|.+++ | +++++.|++|++++||+|+..++++|+++|++++.+..+.
T Consensus 158 Pdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e 208 (219)
T PTZ00445 158 PMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGNE 208 (219)
T ss_pred CCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence 35555 4 4689999999999999999999999999999999997654
No 129
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.85 E-value=7.6e-08 Score=82.11 Aligned_cols=44 Identities=9% Similarity=0.085 Sum_probs=37.5
Q ss_pred CCCchHHHHHHHHhcCCCCCeEEEE--eCCccchhHHHhcCCeEEE
Q 035566 144 TTGQELQLISMLRMVAHHFFQRLFF--DDSTRNIECGKSIGLHTVL 187 (238)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~v~v--gD~~~di~~a~~~G~~~i~ 187 (238)
...+..++..+++.++++.++++.| ||+.||+.|.+.+|...++
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 3345778888899999998999999 9999999999999986554
No 130
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.77 E-value=2.2e-07 Score=65.76 Aligned_cols=137 Identities=10% Similarity=0.115 Sum_probs=86.2
Q ss_pred CChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccce-------eeec----
Q 035566 70 FDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDG-------IVNF---- 135 (238)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~-------i~~~---- 135 (238)
.+.++..+.+. ..+...|+.+++.++++.+ .+++|++-...+..+++.++=.+..+. ....
T Consensus 59 ~s~~Eile~ll-----k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~ 133 (220)
T COG4359 59 SSLEEILEFLL-----KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQ 133 (220)
T ss_pred CCHHHHHHHHH-----hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCc
Confidence 33455555443 3356678899988888755 578999999999999998762221111 1111
Q ss_pred --------ccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEE---EecCCCCCccccccccCh
Q 035566 136 --------ESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTV---LVGTSRRTKGADYALENI 204 (238)
Q Consensus 136 --------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i---~v~~~~~~~~ad~v~~~~ 204 (238)
+..+..| ... ++.+.-+++.+++.|||..|+.+|+....-.+ +++.=.+....-.-..++
T Consensus 134 h~i~~~~ds~fG~dK-----~~v----I~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~~L~nyc~eqn~~f~~fe~F 204 (220)
T COG4359 134 HSIKYTDDSQFGHDK-----SSV----IHELSEPNESIFYCGDSVSDLSAAKLSDLLFAKDDLLNYCREQNLNFLEFETF 204 (220)
T ss_pred eeeecCCccccCCCc-----chh----HHHhhcCCceEEEecCCcccccHhhhhhhHhhHHHHHHHHHHcCCCCcccccH
Confidence 1122222 222 34555567789999999999999999875322 111111234445567889
Q ss_pred hHHHHHhHHhhhcccc
Q 035566 205 HNIREAFPELWDADEI 220 (238)
Q Consensus 205 ~el~~~l~~~~~~~~~ 220 (238)
.|+..-+++++..+++
T Consensus 205 ~eIlk~iekvl~~~~~ 220 (220)
T COG4359 205 YEILKEIEKVLEVQEW 220 (220)
T ss_pred HHHHHHHHHHHhhhcC
Confidence 9999889998887654
No 131
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.75 E-value=2.4e-08 Score=75.63 Aligned_cols=43 Identities=9% Similarity=0.101 Sum_probs=34.0
Q ss_pred CCCchHHHHHHHHhcCC--CCCeEEEEeCCccchhHHHhcCCeEE
Q 035566 144 TTGQELQLISMLRMVAH--HFFQRLFFDDSTRNIECGKSIGLHTV 186 (238)
Q Consensus 144 ~~~~~~~~~~~~~~~~~--~~~~~v~vgD~~~di~~a~~~G~~~i 186 (238)
...+...+..+++.+++ +++++++|||+.||+.|.+.+|+..+
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 33456666666777765 67799999999999999999998543
No 132
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.73 E-value=1e-07 Score=73.32 Aligned_cols=52 Identities=29% Similarity=0.371 Sum_probs=43.3
Q ss_pred hhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCC
Q 035566 92 PVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNK 143 (238)
Q Consensus 92 ~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~ 143 (238)
|++.++|++|+.+ .+|+|++.+..+...++.+|+..+|+.++++++....+|
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp 203 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYS 203 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCC
Confidence 6677777777655 479999999999999999999999999998887766664
No 133
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.72 E-value=3.6e-08 Score=73.67 Aligned_cols=49 Identities=20% Similarity=0.152 Sum_probs=39.5
Q ss_pred CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEE
Q 035566 138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTV 186 (238)
Q Consensus 138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i 186 (238)
....+++..+...+..++++++++++++++|||+.||+.|++.+|+..+
T Consensus 155 ~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 155 LEVLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred EEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 3333344556677777799999999999999999999999999998654
No 134
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.71 E-value=3.8e-08 Score=83.95 Aligned_cols=109 Identities=13% Similarity=0.307 Sum_probs=81.8
Q ss_pred CCCChhHHHHHhcCCC----CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCC
Q 035566 88 LKPDPVLRNLLLSLPI----RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFF 163 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~----~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 163 (238)
.+++||+.+.++.|+. +.+++|+.+...+..+++++|++++|..+. | ..+ ...+++++..++
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~---------p--~~K---~~~i~~l~~~~~ 426 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL---------P--EDK---LEIVKELREKYG 426 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC---------c--HHH---HHHHHHHHhcCC
Confidence 3678999999988864 456999999999999999999987764332 1 012 224455666668
Q ss_pred eEEEEeCCccchhHHHhcCCeEEEec-CCCC--Cccccccc--cChhHHHHHh
Q 035566 164 QRLFFDDSTRNIECGKSIGLHTVLVG-TSRR--TKGADYAL--ENIHNIREAF 211 (238)
Q Consensus 164 ~~v~vgD~~~di~~a~~~G~~~i~v~-~~~~--~~~ad~v~--~~~~el~~~l 211 (238)
+++||||+.||+.+++.+|+ .+.++ .+.. ...+|.++ +++.+|.+++
T Consensus 427 ~v~~vGDg~nD~~al~~A~v-gia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 427 PVAMVGDGINDAPALAAADV-GIAMGASGSDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred EEEEEeCCHHHHHHHHhCCE-EEEeCCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence 99999999999999999997 44444 2222 56789998 8899987765
No 135
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.71 E-value=6.8e-07 Score=69.00 Aligned_cols=40 Identities=15% Similarity=0.021 Sum_probs=28.2
Q ss_pred hHHHHHHHHhcCC--CCCeEEEEeCCccchhHHHhcCCeEEE
Q 035566 148 ELQLISMLRMVAH--HFFQRLFFDDSTRNIECGKSIGLHTVL 187 (238)
Q Consensus 148 ~~~~~~~~~~~~~--~~~~~v~vgD~~~di~~a~~~G~~~i~ 187 (238)
..++..+.+.+.- .+-.++.+|||+||+.|.+.+.+.++.
T Consensus 210 g~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 210 EQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred HHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 4444444444332 345899999999999999999986554
No 136
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.70 E-value=4.5e-08 Score=83.94 Aligned_cols=109 Identities=12% Similarity=0.214 Sum_probs=79.4
Q ss_pred CCCChhHHHHHhcCCCC----eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCC
Q 035566 88 LKPDPVLRNLLLSLPIR----KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFF 163 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~----~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 163 (238)
.+++||+.+.++.|+.+ .+++|+.+...+..+++++|+.++|..+. | ..+. ..+++++..++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~---------p--~~K~---~~v~~l~~~~~ 448 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL---------P--EDKL---AIVKELQEEGG 448 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC---------H--HHHH---HHHHHHHHcCC
Confidence 45789999999988544 56999999999999999999987765431 1 0122 23444444667
Q ss_pred eEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566 164 QRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF 211 (238)
Q Consensus 164 ~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l 211 (238)
+++||||+.||+.+++.+|+. +.++++.+ +..||+++. ++..+.+++
T Consensus 449 ~v~~vGDg~nD~~al~~A~vg-ia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 449 VVAMVGDGINDAPALAAADVG-IAMGAGSDVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred EEEEEECChhHHHHHhhCCEe-EEeCCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 999999999999999999953 33333332 457898888 577776654
No 137
>PLN02382 probable sucrose-phosphatase
Probab=98.63 E-value=1.2e-06 Score=72.11 Aligned_cols=56 Identities=18% Similarity=0.201 Sum_probs=44.6
Q ss_pred CCCCCCCCCchHHHHHHHHhc---CCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566 138 LNPTNKTTGQELQLISMLRMV---AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR 193 (238)
Q Consensus 138 ~~~~k~~~~~~~~~~~~~~~~---~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~ 193 (238)
....+++..|..++..+++++ |++++++++|||+.||++|.+.+|..++.+.++.+
T Consensus 167 ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~ 225 (413)
T PLN02382 167 LDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQE 225 (413)
T ss_pred EEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcH
Confidence 344445556678888888998 99999999999999999999999955677766653
No 138
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.62 E-value=2.2e-08 Score=71.77 Aligned_cols=96 Identities=18% Similarity=0.104 Sum_probs=78.3
Q ss_pred CCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCccc-ccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566 88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLED-CFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ 164 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~-~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 164 (238)
+...||+.++|+.+... .+|.|++.+.++..++++++... +|+.+++.++....++ . +.+.++.+|.++++
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~----~--~~K~L~~l~~~~~~ 114 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNG----K--YVKDLSLVGKDLSK 114 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCC----C--EEeEchhcCCChhh
Confidence 45679999999998654 78999999999999999999776 8888888776554443 1 33446788999999
Q ss_pred EEEEeCCccchhHHHhcCCeEEEec
Q 035566 165 RLFFDDSTRNIECGKSIGLHTVLVG 189 (238)
Q Consensus 165 ~v~vgD~~~di~~a~~~G~~~i~v~ 189 (238)
+++|||++.++.++...|+.+....
T Consensus 115 vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 115 VIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred EEEEeCChhhhccCccCEeecCCCC
Confidence 9999999999999999998766554
No 139
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.62 E-value=1.7e-07 Score=82.93 Aligned_cols=76 Identities=16% Similarity=0.169 Sum_probs=55.5
Q ss_pred CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhh
Q 035566 138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELW 215 (238)
Q Consensus 138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~ 215 (238)
+....+...|...+..+++ +++++.+++|||+.||+.|.+.++.....+..+.....|++++++.+|+.++|..+.
T Consensus 649 veV~p~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 649 VEVRPAGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPGESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred EEEEECCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCCCCcceEeCCCHHHHHHHHHHHh
Confidence 3333444556777766777 778899999999999999999974323333333356789999999999888887654
No 140
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=98.61 E-value=8.7e-07 Score=73.12 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=62.5
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhc---------CcccccceeeecccC-----------------C
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKL---------GLEDCFDGIVNFESL-----------------N 139 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~---------~~~~~f~~i~~~~~~-----------------~ 139 (238)
.+.|.+..+|+.++.. .+++||++..++..+++.+ .+.++||.|+..... +
T Consensus 183 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g 262 (448)
T PF05761_consen 183 HKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETG 262 (448)
T ss_dssp E--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTS
T ss_pred cCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCC
Confidence 3457788888777644 6899999999999999865 466889998765431 0
Q ss_pred CC---------CCCC-CchHHHHHHHHhcCCCCCeEEEEeCCc-cc-hhHHHhcCCeEEEecCC
Q 035566 140 PT---------NKTT-GQELQLISMLRMVAHHFFQRLFFDDST-RN-IECGKSIGLHTVLVGTS 191 (238)
Q Consensus 140 ~~---------k~~~-~~~~~~~~~~~~~~~~~~~~v~vgD~~-~d-i~~a~~~G~~~i~v~~~ 191 (238)
.. .++. =.......+.+.+|....++++|||+. .| +.+-+..||.+++|-..
T Consensus 263 ~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 263 KLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp SEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred ccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 00 0000 011234445688888889999999996 55 55555569999999553
No 141
>PTZ00174 phosphomannomutase; Provisional
Probab=98.61 E-value=1.3e-07 Score=72.78 Aligned_cols=50 Identities=16% Similarity=0.052 Sum_probs=40.6
Q ss_pred CCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeC----CccchhHHHhcCCeEEEecCC
Q 035566 138 LNPTNKTTGQELQLISMLRMVAHHFFQRLFFDD----STRNIECGKSIGLHTVLVGTS 191 (238)
Q Consensus 138 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD----~~~di~~a~~~G~~~i~v~~~ 191 (238)
.....++..+..++..++++ ++++++||| +.||++|.+.++..++.|.+.
T Consensus 180 leI~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~ 233 (247)
T PTZ00174 180 FDVFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNP 233 (247)
T ss_pred EEeeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCH
Confidence 45555666778888888777 589999999 899999999988877888754
No 142
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.58 E-value=3.6e-07 Score=70.25 Aligned_cols=53 Identities=23% Similarity=0.154 Sum_probs=38.0
Q ss_pred CCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 139 NPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 139 ~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
...++...|...+..+++++++++++++++|||-||+.|. ..+.+.|.|.+..
T Consensus 158 dilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 158 DILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ 210 (247)
T ss_dssp EEEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred EEccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence 3343444556667767999999999999999999999999 6666888887755
No 143
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.56 E-value=1.3e-06 Score=62.36 Aligned_cols=78 Identities=18% Similarity=0.244 Sum_probs=50.6
Q ss_pred CeEEEecC-------ChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhc--CCCCCeEEEEeCCc-c
Q 035566 104 RKVIFSNA-------DEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMV--AHHFFQRLFFDDST-R 173 (238)
Q Consensus 104 ~~~i~t~~-------~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~--~~~~~~~v~vgD~~-~ 173 (238)
+.+|+||+ ....++.+-+.+|+. .+... ..|| .....+.++.... ...|+++++|||.. .
T Consensus 79 ~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~----~kKP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~T 148 (168)
T PF09419_consen 79 RVLIVSNSAGSSDDPDGERAEALEKALGIP----VLRHR----AKKP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFT 148 (168)
T ss_pred eEEEEECCCCcccCccHHHHHHHHHhhCCc----EEEeC----CCCC--ccHHHHHHHHhhccCCCCchhEEEEcchHHH
Confidence 57899997 355666667777743 22111 2233 1222333333222 24699999999996 6
Q ss_pred chhHHHhcCCeEEEecCC
Q 035566 174 NIECGKSIGLHTVLVGTS 191 (238)
Q Consensus 174 di~~a~~~G~~~i~v~~~ 191 (238)
|+-+|...|+.++++..|
T Consensus 149 DVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 149 DVLMGNRMGSYTILVTDG 166 (168)
T ss_pred HHHHhhccCceEEEEecC
Confidence 799999999999999776
No 144
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.55 E-value=4.1e-07 Score=78.05 Aligned_cols=108 Identities=13% Similarity=0.228 Sum_probs=77.3
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ 164 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 164 (238)
.+++|++.+.++.|+.. .+++|+.+....+.+.+++|++ +|. + ..| .++.. .++++..++++
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~~-----~----~~p--~~K~~---~v~~l~~~~~~ 468 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VRA-----E----VLP--DDKAA---LIKELQEKGRV 468 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EEc-----c----CCh--HHHHH---HHHHHHHcCCE
Confidence 35689999999888654 5799999999999999999985 221 1 112 11222 23444446789
Q ss_pred EEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566 165 RLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF 211 (238)
Q Consensus 165 ~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l 211 (238)
++||||+.||+.+++.+|+. +.++.+.+ ...+|+++. ++.++.+++
T Consensus 469 v~~VGDg~nD~~al~~A~vg-ia~g~g~~~a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 469 VAMVGDGINDAPALAQADVG-IAIGAGTDVAIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred EEEEeCCCccHHHHhhCCEE-EEeCCcCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 99999999999999999974 44544433 567898884 777777665
No 145
>PLN02423 phosphomannomutase
Probab=98.55 E-value=1.7e-06 Score=66.51 Aligned_cols=49 Identities=18% Similarity=0.060 Sum_probs=38.6
Q ss_pred cCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeC----CccchhHHHhcCCeEEEecC
Q 035566 137 SLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDD----STRNIECGKSIGLHTVLVGT 190 (238)
Q Consensus 137 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD----~~~di~~a~~~G~~~i~v~~ 190 (238)
..+...|+..+..++..++ +++++++||| +.||++|.+.-|+.++-|..
T Consensus 180 ~iDi~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred EEEEeeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 3455556666677776555 8899999999 79999999998988877744
No 146
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.53 E-value=8.7e-07 Score=59.15 Aligned_cols=114 Identities=11% Similarity=0.130 Sum_probs=83.6
Q ss_pred CCCCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHH-HHHhcCCCCC
Q 035566 87 NLKPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLIS-MLRMVAHHFF 163 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~ 163 (238)
.-+.++.+.+.++.|+. ..+|.|+.....+....+..|+. .+.++... .+.... +++.++-+-+
T Consensus 28 gGklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~--~~rv~a~a-----------~~e~K~~ii~eLkk~~~ 94 (152)
T COG4087 28 GGKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIP--VERVFAGA-----------DPEMKAKIIRELKKRYE 94 (152)
T ss_pred CcEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCc--eeeeeccc-----------CHHHHHHHHHHhcCCCc
Confidence 34567777777777654 46788888888888888888865 44444433 222222 4677776668
Q ss_pred eEEEEeCCccchhHHHhcCCeEEEecCCCC----CccccccccChhHHHHHhHH
Q 035566 164 QRLFFDDSTRNIECGKSIGLHTVLVGTSRR----TKGADYALENIHNIREAFPE 213 (238)
Q Consensus 164 ~~v~vgD~~~di~~a~~~G~~~i~v~~~~~----~~~ad~v~~~~~el~~~l~~ 213 (238)
.++||||+.||+.+.+.+.+..+-+..... ...||+++.++.|+.+++..
T Consensus 95 k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 95 KVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred EEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 999999999999999999988777765442 35699999999999887643
No 147
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.48 E-value=8e-07 Score=68.24 Aligned_cols=89 Identities=11% Similarity=-0.001 Sum_probs=68.8
Q ss_pred CCCCChhHHHHHhcCCCC---eEEEecCChHHHH--HHHHhcCccc-ccceeeecccCCCCCCCCCchHHHHHHHHhcCC
Q 035566 87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIHVA--KVLRKLGLED-CFDGIVNFESLNPTNKTTGQELQLISMLRMVAH 160 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~--~~l~~~~~~~-~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 160 (238)
...++||+.++|+.|+.+ .+++||+++.... ..++++|+.. +|+.++++.... ...+...+++++.
T Consensus 22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~--------~~~l~~~~~~~~~ 93 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA--------VQMILESKKRFDI 93 (242)
T ss_pred CCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH--------HHHHHhhhhhccC
Confidence 356799999999998754 5799998877655 7889999997 899988876422 1223334577888
Q ss_pred CCCeEEEEeCCccchhHHHhcCC
Q 035566 161 HFFQRLFFDDSTRNIECGKSIGL 183 (238)
Q Consensus 161 ~~~~~v~vgD~~~di~~a~~~G~ 183 (238)
+++++++|||+..|+.....+|.
T Consensus 94 ~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 94 RNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred CCceEEEeCCcccchhhhcCCCc
Confidence 89999999999999888766654
No 148
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.47 E-value=4.9e-07 Score=64.54 Aligned_cols=88 Identities=14% Similarity=0.212 Sum_probs=51.5
Q ss_pred hhHHHHHhcCC---CCeEEEecCC---h-----------HHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH
Q 035566 92 PVLRNLLLSLP---IRKVIFSNAD---E-----------IHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM 154 (238)
Q Consensus 92 ~~~~~~l~~l~---~~~~i~t~~~---~-----------~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~ 154 (238)
+++.+.|+.+. ..++|+||.. . ..+..+++.+++. +..+.........|| .++++..
T Consensus 32 ~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~~~~a~~~d~~RKP----~~GM~~~ 105 (159)
T PF08645_consen 32 PGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQVYAAPHKDPCRKP----NPGMWEF 105 (159)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EEEEECGCSSTTSTT----SSHHHHH
T ss_pred hhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eEEEecCCCCCCCCC----chhHHHH
Confidence 34556666554 3467888851 1 2344555666655 333444444455655 6777775
Q ss_pred -HHhcC----CCCCeEEEEeCC-----------ccchhHHHhcCCeE
Q 035566 155 -LRMVA----HHFFQRLFFDDS-----------TRNIECGKSIGLHT 185 (238)
Q Consensus 155 -~~~~~----~~~~~~v~vgD~-----------~~di~~a~~~G~~~ 185 (238)
++.++ ++.++++||||. ..|...|.++|++.
T Consensus 106 ~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 106 ALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp HCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred HHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 55665 588999999996 57799999999864
No 149
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.46 E-value=7.2e-07 Score=59.49 Aligned_cols=85 Identities=21% Similarity=0.078 Sum_probs=62.6
Q ss_pred CCCChhHHHHHhcCCCCeEEEec---CChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHH------Hhc
Q 035566 88 LKPDPVLRNLLLSLPIRKVIFSN---ADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISML------RMV 158 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~~~i~t~---~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~------~~~ 158 (238)
+..+|.+++++++++.+++|++. +....+-+.++.+++..||+.++.-.. +-+...+.+++ +..
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~ViePh-------P~K~~ML~~llr~i~~er~~ 112 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVIEPH-------PYKFLMLSQLLREINTERNQ 112 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEecCC-------ChhHHHHHHHHHHHHHhhcc
Confidence 56789999999999998876554 566777788999999999998876432 12344444444 345
Q ss_pred CCCCCeEEEEeCCccchhHHH
Q 035566 159 AHHFFQRLFFDDSTRNIECGK 179 (238)
Q Consensus 159 ~~~~~~~v~vgD~~~di~~a~ 179 (238)
.+.|.++++++|..-.+.-..
T Consensus 113 ~ikP~~Ivy~DDR~iH~~~Iw 133 (164)
T COG4996 113 KIKPSEIVYLDDRRIHFGNIW 133 (164)
T ss_pred ccCcceEEEEecccccHHHHH
Confidence 579999999999976655444
No 150
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=98.46 E-value=1.1e-06 Score=67.47 Aligned_cols=69 Identities=13% Similarity=0.200 Sum_probs=59.0
Q ss_pred CchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhc-------CCeEEEecCCCCCccccccccChhHHHHHhHHh
Q 035566 146 GQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSI-------GLHTVLVGTSRRTKGADYALENIHNIREAFPEL 214 (238)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~-------G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~ 214 (238)
.|...+..+++.++++++++++|||+.+|+.|++.+ |..++.|..+..+..|++++++.+++.+++..+
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l 242 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLL 242 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHH
Confidence 445667777999999999999999999999999988 667888876666788999999999999888664
No 151
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.42 E-value=2.1e-06 Score=66.31 Aligned_cols=46 Identities=30% Similarity=0.366 Sum_probs=36.8
Q ss_pred hhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeeccc
Q 035566 92 PVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFES 137 (238)
Q Consensus 92 ~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~ 137 (238)
|++.++|++|+.+ .+|+|++++..+...++.+|+..+|+.++++++
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 5566666666554 579999999999999999999999998877665
No 152
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.37 E-value=8.2e-06 Score=61.28 Aligned_cols=99 Identities=10% Similarity=-0.071 Sum_probs=56.7
Q ss_pred CCCCChhHHHHHhcCCCC---eEEEecCChHH---HHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCC
Q 035566 87 NLKPDPVLRNLLLSLPIR---KVIFSNADEIH---VAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAH 160 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~---~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 160 (238)
..++.|++.++++.++.+ .+++|+.+... +...|...|+..+ +.++-.......+....-+.+.+..+.+-|.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GY 196 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGY 196 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCc
Confidence 457889999999988754 56889887655 5566777887754 4444332111221100002222322233333
Q ss_pred CCCeEEEEeCCccchhHHHhcCCeEEEec
Q 035566 161 HFFQRLFFDDSTRNIECGKSIGLHTVLVG 189 (238)
Q Consensus 161 ~~~~~v~vgD~~~di~~a~~~G~~~i~v~ 189 (238)
.=+..|||..+|+.. ..+|.++.-..
T Consensus 197 --rIv~~iGDq~sDl~G-~~~~~RtFKLP 222 (229)
T TIGR01675 197 --RIWGNIGDQWSDLLG-SPPGRRTFKLP 222 (229)
T ss_pred --eEEEEECCChHHhcC-CCccCceeeCC
Confidence 225669999999854 34555555443
No 153
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.34 E-value=1.3e-06 Score=78.79 Aligned_cols=121 Identities=17% Similarity=0.249 Sum_probs=82.6
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCC--------------CCCchHHH
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNK--------------TTGQELQL 151 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~--------------~~~~~~~~ 151 (238)
++.|++.+.++.++.. ..++|+.....+..+.+.+|+...++.++++.+....+. ...|...
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K- 606 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK- 606 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH-
Confidence 6689999999888755 569999999999999999999876665544433322110 0001111
Q ss_pred HHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEec-CCCC--Cccccccc--cChhHHHHHh
Q 035566 152 ISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVG-TSRR--TKGADYAL--ENIHNIREAF 211 (238)
Q Consensus 152 ~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~-~~~~--~~~ad~v~--~~~~el~~~l 211 (238)
..+++.+.-..+.+.|+||+.||..+++.+++. +.++ .+.. +..||+++ +++..+...+
T Consensus 607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVG-ia~g~~g~~va~~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 607 MKIVKALQKRGDVVAMTGDGVNDAPALKLADIG-VAMGQTGTDVAKEAADMILTDDDFATILSAI 670 (884)
T ss_pred HHHHHHHHHCCCEEEEECCCcccHHHHHhCCee-EecCCCcCHHHHHhcCEEEcCCCHHHHHHHH
Confidence 223344444457899999999999999999974 4443 2332 56789999 5688887765
No 154
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.31 E-value=2.5e-06 Score=76.69 Aligned_cols=109 Identities=9% Similarity=0.141 Sum_probs=78.5
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR 165 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 165 (238)
+++|++.+.++.++.. .+++|+........+.+++|+..+|..+. | .. -.+.++.++..++++
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~~---------p----~~-K~~~i~~l~~~~~~v 715 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVL---------P----DG-KAEAIKRLQSQGRQV 715 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCCC---------H----HH-HHHHHHHHhhcCCEE
Confidence 5678999998888654 56999999999999999999876443221 1 11 123456677778899
Q ss_pred EEEeCCccchhHHHhcCCeEEEecCCCC--Cccccc--cccChhHHHHHhH
Q 035566 166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADY--ALENIHNIREAFP 212 (238)
Q Consensus 166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~--v~~~~~el~~~l~ 212 (238)
+||||+.||+.+++.+|+ .+.++++.. ...+|. ..+++.++..++.
T Consensus 716 ~~vGDg~nD~~al~~Agv-gia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 716 AMVGDGINDAPALAQADV-GIAMGGGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred EEEeCCHHHHHHHHhCCe-eEEecCCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 999999999999999998 455544442 444554 4467777777663
No 155
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=98.28 E-value=4.8e-05 Score=63.99 Aligned_cols=96 Identities=14% Similarity=0.110 Sum_probs=57.1
Q ss_pred CChhHHHHHhcCCCCeEEEecCChHHHHHHHHh-cCccccc--------ceeeecccCCCCCCCCCchHHHHHHHHhcCC
Q 035566 90 PDPVLRNLLLSLPIRKVIFSNADEIHVAKVLRK-LGLEDCF--------DGIVNFESLNPTNKTTGQELQLISMLRMVAH 160 (238)
Q Consensus 90 ~~~~~~~~l~~l~~~~~i~t~~~~~~~~~~l~~-~~~~~~f--------~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 160 (238)
..+...+.+++.+. .+++|.+++..++...+. +|++..+ +..+++.-.+.. . -.-......+.+.+|.
T Consensus 111 l~~~a~~~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~-~-c~Ge~Kv~rl~~~~g~ 187 (497)
T PLN02177 111 VHPETWRVFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPG-V-LVGDHKRDAVLKEFGD 187 (497)
T ss_pred cCHHHHHHHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCC-C-CccHHHHHHHHHHhCC
Confidence 44666666666543 489999999999999975 7866321 222222211100 0 0012223333345564
Q ss_pred CCCeEEEEeCCccchhHHHhcCCeEEEecC
Q 035566 161 HFFQRLFFDDSTRNIECGKSIGLHTVLVGT 190 (238)
Q Consensus 161 ~~~~~v~vgD~~~di~~a~~~G~~~i~v~~ 190 (238)
+... +++|||.+|..+...++- .+.|+.
T Consensus 188 ~~~~-~aYgDS~sD~plL~~a~e-~y~V~~ 215 (497)
T PLN02177 188 ALPD-LGLGDRETDHDFMSICKE-GYMVPR 215 (497)
T ss_pred CCce-EEEECCccHHHHHHhCCc-cEEeCC
Confidence 4444 899999999999999995 455544
No 156
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=98.28 E-value=4.6e-07 Score=63.05 Aligned_cols=111 Identities=16% Similarity=0.174 Sum_probs=66.5
Q ss_pred hhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcc-cccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEE
Q 035566 92 PVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLE-DCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFF 168 (238)
Q Consensus 92 ~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~v 168 (238)
.++...|..+++. ++.+|.............+... ..++.+...+ . +.. ...++.++++ +++
T Consensus 75 q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g------~----h~K-V~~vrth~id----lf~ 139 (194)
T COG5663 75 QLVKQVLPSLKEEHRLIYITARKADLTRITYAWLFIQNIHYDHLEIVG------L----HHK-VEAVRTHNID----LFF 139 (194)
T ss_pred HHHHHHhHHHHhhceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhc------c----ccc-chhhHhhccC----ccc
Confidence 4566666666544 5566665444443333333222 1233333222 1 111 2345778886 899
Q ss_pred eCCccc-hhHHHhcCCeEEEecCCCC-Ccccc--ccccChhHHHHHhHHhhhc
Q 035566 169 DDSTRN-IECGKSIGLHTVLVGTSRR-TKGAD--YALENIHNIREAFPELWDA 217 (238)
Q Consensus 169 gD~~~d-i~~a~~~G~~~i~v~~~~~-~~~ad--~v~~~~~el~~~l~~~~~~ 217 (238)
.|+..+ ++.|+.+|++.+.+++.+. ++.+. ..+..+.|..+.+...+++
T Consensus 140 ed~~~na~~iAk~~~~~vilins~ynRkp~~~niiR~~~w~e~y~~vd~~~kR 192 (194)
T COG5663 140 EDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIRANNWAEAYEWVDSRLKR 192 (194)
T ss_pred cccCchHHHHHHhcCCcEEEecCcccccchHHHHHHHHhHHHHHHHHHHHhcc
Confidence 999888 8888889999999999886 44333 4455777777777765554
No 157
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=98.17 E-value=3.8e-06 Score=74.96 Aligned_cols=72 Identities=17% Similarity=0.129 Sum_probs=54.4
Q ss_pred CCCCchHHHHHHH---HhcCCCCCeEEEEeCCccchhHHHhcCC-------------eEEEecCCCCCccccccccChhH
Q 035566 143 KTTGQELQLISML---RMVAHHFFQRLFFDDSTRNIECGKSIGL-------------HTVLVGTSRRTKGADYALENIHN 206 (238)
Q Consensus 143 ~~~~~~~~~~~~~---~~~~~~~~~~v~vgD~~~di~~a~~~G~-------------~~i~v~~~~~~~~ad~v~~~~~e 206 (238)
++..|...+..++ +.+|++++.+++|||..||..|.+.++- -+|.|+ .....|.+.+++.+|
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG--~~~S~A~y~L~d~~e 836 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVG--QKPSKAKYYLDDTAE 836 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEEC--CCCccCeEecCCHHH
Confidence 3445566666665 4468999999999999999999998762 234454 345788999999999
Q ss_pred HHHHhHHhhh
Q 035566 207 IREAFPELWD 216 (238)
Q Consensus 207 l~~~l~~~~~ 216 (238)
+.++|..+..
T Consensus 837 V~~lL~~L~~ 846 (854)
T PLN02205 837 IVRLMQGLAS 846 (854)
T ss_pred HHHHHHHHHh
Confidence 9998877654
No 158
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.10 E-value=4.4e-06 Score=63.34 Aligned_cols=90 Identities=12% Similarity=0.015 Sum_probs=50.7
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChH---HHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCC
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEI---HVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHF 162 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~---~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 162 (238)
++.|++.++++.++.+ ++++|+.+.. ....-|+..|+..+-..+.-.......+.....+......+++-|..
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~- 193 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR- 193 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE-
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCc-
Confidence 6778999999888655 4689986543 55566777787644333333332211111111122333333333432
Q ss_pred CeEEEEeCCccchhHHHh
Q 035566 163 FQRLFFDDSTRNIECGKS 180 (238)
Q Consensus 163 ~~~v~vgD~~~di~~a~~ 180 (238)
=++.|||..+|+..++.
T Consensus 194 -Ii~~iGD~~~D~~~~~~ 210 (229)
T PF03767_consen 194 -IIANIGDQLSDFSGAKT 210 (229)
T ss_dssp -EEEEEESSGGGCHCTHH
T ss_pred -EEEEeCCCHHHhhcccc
Confidence 26789999999888443
No 159
>PLN03017 trehalose-phosphatase
Probab=98.05 E-value=0.00013 Score=58.60 Aligned_cols=71 Identities=14% Similarity=0.199 Sum_probs=52.9
Q ss_pred CchHHHHHHHHhcCCCC---CeEEEEeCCccchhHHHhcC----CeEEEecCCCCCccccccccChhHHHHHhHHhhh
Q 035566 146 GQELQLISMLRMVAHHF---FQRLFFDDSTRNIECGKSIG----LHTVLVGTSRRTKGADYALENIHNIREAFPELWD 216 (238)
Q Consensus 146 ~~~~~~~~~~~~~~~~~---~~~v~vgD~~~di~~a~~~G----~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~ 216 (238)
.|...+..+++.+++.. .-.+|+||-..|-.+.+.+. --+|.|+.......|.|.+++.+|+.++|..+..
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~ 360 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVE 360 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 45677777788888653 35899999999977777652 2356676544567899999999999998876643
No 160
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=98.00 E-value=0.00012 Score=56.22 Aligned_cols=103 Identities=8% Similarity=-0.013 Sum_probs=54.9
Q ss_pred CCCCCChhHHHHHhcCCCC---eEEEecCChHH---HHHHHHhcCcccccceeeecccCCCCC-CCCCchHHHHHHHHhc
Q 035566 86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIH---VAKVLRKLGLEDCFDGIVNFESLNPTN-KTTGQELQLISMLRMV 158 (238)
Q Consensus 86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~---~~~~l~~~~~~~~f~~i~~~~~~~~~k-~~~~~~~~~~~~~~~~ 158 (238)
...++.|++.++.+.++.+ .+++|+..... ...-|+..|+..+ +.++-.......+ ...+.+......+.+-
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence 3467889999999888654 56889986543 3445556676543 4333322211111 1001111222222333
Q ss_pred CCCCCeEEEEeCCccchhHHHhcCCeEEEecCC
Q 035566 159 AHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTS 191 (238)
Q Consensus 159 ~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~ 191 (238)
|. .=+..|||..+|+......+-++.-..++
T Consensus 221 GY--rIv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 221 GY--NIVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred Cc--eEEEEECCCHHhccCCCccCcceecCCCc
Confidence 43 23567999999995544223455555444
No 161
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.99 E-value=1.5e-05 Score=70.72 Aligned_cols=106 Identities=12% Similarity=0.172 Sum_probs=72.4
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR 165 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 165 (238)
+++|++.+.++.|+.. .+++|+........+.+.+|+..++. ..|. .+.. +++.+. .+.++
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~----------~~p~--~K~~---~v~~l~-~~~~v 631 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG----------LLPE--DKVK---AVTELN-QHAPL 631 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC----------CCHH--HHHH---HHHHHh-cCCCE
Confidence 6689999999888654 57999999999999999999863221 1120 1222 234444 33689
Q ss_pred EEEeCCccchhHHHhcCCeEEEecCCCC--Cccccccc--cChhHHHHHh
Q 035566 166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYAL--ENIHNIREAF 211 (238)
Q Consensus 166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~--~~~~el~~~l 211 (238)
+||||+.||..+++.+++. +.++.+.. ...+|.++ +++.+|.+++
T Consensus 632 ~mvGDgiNDapAl~~A~vg-ia~g~~~~~a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 632 AMVGDGINDAPAMKAASIG-IAMGSGTDVALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred EEEECCHHhHHHHHhCCee-EEecCCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 9999999999999999964 44444432 44567655 4576666554
No 162
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.97 E-value=3.7e-05 Score=69.89 Aligned_cols=121 Identities=9% Similarity=0.141 Sum_probs=77.9
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc----ceeeecccCCCCCC--------------CCCc
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF----DGIVNFESLNPTNK--------------TTGQ 147 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f----~~i~~~~~~~~~k~--------------~~~~ 147 (238)
++.+++.+.++.++.. ..++|+........+.+.+|+...- ...+.+.......+ ...|
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P 616 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP 616 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence 5678999999888755 4688988888999999999985311 11122111110000 0001
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccC--hhHHHHHh
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALEN--IHNIREAF 211 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~--~~el~~~l 211 (238)
... .++++.++-..+.+.|+||+.||+.|.+.+++ .+.++.+.+ +..||+++.+ +..+.+++
T Consensus 617 ~~K-~~iV~~lq~~g~~va~iGDG~ND~~alk~AdV-Gia~g~g~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 617 SHK-SELVELLQEQGEIVAMTGDGVNDAPALKKADI-GIAMGSGTEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred HHH-HHHHHHHHhcCCeEEEecCCcchHHHHHhCCe-eEECCCCcHHHHHhcCeEEccCCHHHHHHHH
Confidence 111 23345555455778889999999999999998 455555543 5679999987 77777655
No 163
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.97 E-value=0.00017 Score=53.26 Aligned_cols=38 Identities=18% Similarity=0.219 Sum_probs=31.6
Q ss_pred CCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCc
Q 035566 88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGL 125 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~ 125 (238)
.+..||+.+.++.++.. -+++|.+..+++..+..++|+
T Consensus 82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGV 121 (315)
T ss_pred cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCC
Confidence 56779999999999874 578888888999888888775
No 164
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.79 E-value=3.6e-06 Score=60.27 Aligned_cols=88 Identities=22% Similarity=0.195 Sum_probs=57.9
Q ss_pred CCCChhHHHHHhcCC--CCeEEEecCChHHHHHHHHhcCc-ccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566 88 LKPDPVLRNLLLSLP--IRKVIFSNADEIHVAKVLRKLGL-EDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ 164 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~--~~~~i~t~~~~~~~~~~l~~~~~-~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 164 (238)
+...||+.++|+.+. ...+|.|.+...++..+++.+.- ..+|+.+++.+.....+. .. .+-++.+|.++++
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~---~~---~KdL~~l~~~~~~ 108 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDKG---SY---IKDLSKLGRDLDN 108 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETT---EE---E--GGGSSS-GGG
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccccc---cc---ccchHHHhhcccc
Confidence 345699999999885 44789999999999999999876 467888877665432211 00 1335677778899
Q ss_pred EEEEeCCccchhHHHhc
Q 035566 165 RLFFDDSTRNIECGKSI 181 (238)
Q Consensus 165 ~v~vgD~~~di~~a~~~ 181 (238)
+|+|+|++.-...-...
T Consensus 109 vvivDD~~~~~~~~~~N 125 (159)
T PF03031_consen 109 VVIVDDSPRKWALQPDN 125 (159)
T ss_dssp EEEEES-GGGGTTSGGG
T ss_pred EEEEeCCHHHeeccCCc
Confidence 99999998864433333
No 165
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.77 E-value=0.00011 Score=51.98 Aligned_cols=87 Identities=11% Similarity=0.082 Sum_probs=50.3
Q ss_pred HHHHHhcCC---CCeEEEecCChHHHHHHH----HhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEE
Q 035566 94 LRNLLLSLP---IRKVIFSNADEIHVAKVL----RKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRL 166 (238)
Q Consensus 94 ~~~~l~~l~---~~~~i~t~~~~~~~~~~l----~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v 166 (238)
+++++.... .+.+.+|+.....++.+. +.+.+.+....++.++.- +|.-..+ -.++...++ -+
T Consensus 119 A~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~---k~~qy~K---t~~i~~~~~----~I 188 (237)
T COG3700 119 ARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKP---KPGQYTK---TQWIQDKNI----RI 188 (237)
T ss_pred HHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCC---Ccccccc---cHHHHhcCc----eE
Confidence 444554332 346788887665444333 344554444444444321 2211111 123456665 49
Q ss_pred EEeCCccchhHHHhcCCeEEEecC
Q 035566 167 FFDDSTRNIECGKSIGLHTVLVGT 190 (238)
Q Consensus 167 ~vgD~~~di~~a~~~G~~~i~v~~ 190 (238)
+.|||.+||.+|+.+|.+.|-+-+
T Consensus 189 hYGDSD~Di~AAkeaG~RgIRilR 212 (237)
T COG3700 189 HYGDSDNDITAAKEAGARGIRILR 212 (237)
T ss_pred EecCCchhhhHHHhcCccceeEEe
Confidence 999999999999999999886644
No 166
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.75 E-value=0.0018 Score=49.93 Aligned_cols=48 Identities=15% Similarity=0.175 Sum_probs=37.2
Q ss_pred CchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHh----cCCeEEEecCCCC
Q 035566 146 GQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKS----IGLHTVLVGTSRR 193 (238)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~----~G~~~i~v~~~~~ 193 (238)
.+...+..++.++|..|+.+|||+|+..++..... .|+..+++.....
T Consensus 162 ~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 162 DKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred ccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 34566666799999999999999999999765544 5888887766543
No 167
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.73 E-value=0.0001 Score=64.30 Aligned_cols=108 Identities=13% Similarity=0.112 Sum_probs=74.4
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR 165 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 165 (238)
++.|++.+.+++++.. ..++|+........+.+.+|++++|-. ..| ... .++.+.+.-..+-+
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~---------~~P----edK-~~iV~~lQ~~G~~V 506 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAE---------CKP----EDK-INVIREEQAKGHIV 506 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcC---------CCH----HHH-HHHHHHHHhCCCEE
Confidence 5678999988888754 568999999999999999998753321 111 222 22233333334568
Q ss_pred EEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566 166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF 211 (238)
Q Consensus 166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l 211 (238)
.|+||+.||..+.+.+.+ .+.++++.. ++.+|.+.- ++..+.+.+
T Consensus 507 aMtGDGvNDAPALa~ADV-GIAMgsGTdvAkeAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 507 AMTGDGTNDAPALAEANV-GLAMNSGTMSAKEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred EEECCChhhHHHHHhCCE-EEEeCCCCHHHHHhCCEEEcCCCHHHHHHHH
Confidence 899999999999999997 455655543 667787763 466665554
No 168
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.68 E-value=0.00013 Score=63.48 Aligned_cols=108 Identities=10% Similarity=0.123 Sum_probs=72.6
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR 165 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 165 (238)
++.|++.+.+++++.. .+++|+........+.+.+|+++++-. ..| ..+..+.+.++. ..+.+
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~---------~~P--edK~~~v~~lq~---~g~~V 511 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAE---------ATP--EDKIALIRQEQA---EGKLV 511 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcC---------CCH--HHHHHHHHHHHH---cCCeE
Confidence 5678999998888755 568999999999999999998654321 112 012222222222 23469
Q ss_pred EEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566 166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF 211 (238)
Q Consensus 166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l 211 (238)
.|+||+.||..+.+.+++. +.++.+.. +..+|.+.- ++..+.+.+
T Consensus 512 amvGDG~NDapAL~~AdvG-iAm~~gt~~akeaadivLldd~~s~Iv~av 560 (675)
T TIGR01497 512 AMTGDGTNDAPALAQADVG-VAMNSGTQAAKEAANMVDLDSDPTKLIEVV 560 (675)
T ss_pred EEECCCcchHHHHHhCCEe-EEeCCCCHHHHHhCCEEECCCCHHHHHHHH
Confidence 9999999999999999985 55555443 556776653 355555544
No 169
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.65 E-value=0.00023 Score=62.38 Aligned_cols=108 Identities=13% Similarity=0.226 Sum_probs=74.0
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR 165 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 165 (238)
++.|+..+.++.|+.. .+++|+..+...+.+.+.+|+++++-.+.. ..... .++++.-..+.+
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellP-------------edK~~-~V~~l~~~g~~V 602 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELLP-------------EDKAE-IVRELQAEGRKV 602 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCCc-------------HHHHH-HHHHHHhcCCEE
Confidence 4568888888777654 579999999999999999998755333321 22221 223333333689
Q ss_pred EEEeCCccchhHHHhcCCeEEEecCCC--CCcccccccc--ChhHHHHHh
Q 035566 166 LFFDDSTRNIECGKSIGLHTVLVGTSR--RTKGADYALE--NIHNIREAF 211 (238)
Q Consensus 166 v~vgD~~~di~~a~~~G~~~i~v~~~~--~~~~ad~v~~--~~~el~~~l 211 (238)
.||||+.||-.+...+.+ .+.++.|. ..+.||.++- ++..+...+
T Consensus 603 amVGDGINDAPALA~AdV-GiAmG~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 603 AMVGDGINDAPALAAADV-GIAMGSGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred EEEeCCchhHHHHhhcCe-eEeecCCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 999999999999999987 45555544 3667776654 467666654
No 170
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.64 E-value=0.00054 Score=51.18 Aligned_cols=96 Identities=14% Similarity=0.188 Sum_probs=57.2
Q ss_pred CChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCCC---eEEEecCChHH----HHHHHHhcCcccccceeeecccCCCCC
Q 035566 70 FDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPIR---KVIFSNADEIH----VAKVLRKLGLEDCFDGIVNFESLNPTN 142 (238)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~----~~~~l~~~~~~~~f~~i~~~~~~~~~k 142 (238)
.+++.|..++.. ...++.||+.++++....+ .+.+||..... ...-|...|+....+..+..-
T Consensus 107 f~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llk------ 176 (274)
T COG2503 107 FTPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLK------ 176 (274)
T ss_pred CCccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEe------
Confidence 334445555443 3467889999999988655 46888876554 345567777775443322111
Q ss_pred CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHH
Q 035566 143 KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECG 178 (238)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a 178 (238)
+..++...-++.+++ .-+-++.|||+..|....
T Consensus 177 k~~k~Ke~R~~~v~k---~~~iVm~vGDNl~DF~d~ 209 (274)
T COG2503 177 KDKKSKEVRRQAVEK---DYKIVMLVGDNLDDFGDN 209 (274)
T ss_pred eCCCcHHHHHHHHhh---ccceeeEecCchhhhcch
Confidence 222234444444444 345688899999886443
No 171
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=97.62 E-value=0.00054 Score=54.96 Aligned_cols=99 Identities=16% Similarity=0.040 Sum_probs=64.0
Q ss_pred HHHHHhcCCCCeEEEecCChHHHHHHHHhc---Ccccccceeeeccc-----------------CCC------CCC---C
Q 035566 94 LRNLLLSLPIRKVIFSNADEIHVAKVLRKL---GLEDCFDGIVNFES-----------------LNP------TNK---T 144 (238)
Q Consensus 94 ~~~~l~~l~~~~~i~t~~~~~~~~~~l~~~---~~~~~f~~i~~~~~-----------------~~~------~k~---~ 144 (238)
....++...++.++.||+...+....+.++ ++..+|+.++.... .+. .+| .
T Consensus 206 ~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~ 285 (424)
T KOG2469|consen 206 LLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQG 285 (424)
T ss_pred chHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhc
Confidence 344445555667999999888877776643 56677877665431 000 001 1
Q ss_pred CCchHHHHH-HHHhcCCCCCeEEEEeCCccc--hhHHHhcCCeEEEecCCC
Q 035566 145 TGQELQLIS-MLRMVAHHFFQRLFFDDSTRN--IECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 145 ~~~~~~~~~-~~~~~~~~~~~~v~vgD~~~d--i~~a~~~G~~~i~v~~~~ 192 (238)
+...++... ++..++....+++++||+..+ +..-+.-||.+++|...-
T Consensus 286 ~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL 336 (424)
T KOG2469|consen 286 GVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPEL 336 (424)
T ss_pred ccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhh
Confidence 112223333 467788878999999999876 777788999999886543
No 172
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.55 E-value=0.00027 Score=61.74 Aligned_cols=108 Identities=13% Similarity=0.164 Sum_probs=74.3
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR 165 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 165 (238)
++.|++.+.+++|+.. ..++|+........+.+.+|++++|-. ..| .... ++.+.+.-..+-+
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A~---------~~P----edK~-~iV~~lQ~~G~~V 510 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAE---------ATP----EDKL-ALIRQEQAEGRLV 510 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEcc---------CCH----HHHH-HHHHHHHHcCCeE
Confidence 4578999998888755 568999999999999999998653211 111 2221 2233333334568
Q ss_pred EEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566 166 LFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF 211 (238)
Q Consensus 166 v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l 211 (238)
.|+||+.||-.+.+.+.+. +.+++|.. ++.+|.+.- ++..+.+.+
T Consensus 511 aMtGDGvNDAPALa~ADVG-IAMgsGTdvAkeAADiVLldd~~s~Iv~av 559 (679)
T PRK01122 511 AMTGDGTNDAPALAQADVG-VAMNSGTQAAKEAGNMVDLDSNPTKLIEVV 559 (679)
T ss_pred EEECCCcchHHHHHhCCEe-EEeCCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 9999999999999999974 55555543 677887764 466666655
No 173
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.51 E-value=0.0021 Score=42.12 Aligned_cols=79 Identities=20% Similarity=0.116 Sum_probs=43.0
Q ss_pred ChhHHHHHhcCC---CCeEEEecCCh---HHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566 91 DPVLRNLLLSLP---IRKVIFSNADE---IHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ 164 (238)
Q Consensus 91 ~~~~~~~l~~l~---~~~~i~t~~~~---~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 164 (238)
+||+.++++.|+ .+.+++||++. ......++.+|+.---+.++++. .....++++. .....
T Consensus 16 ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~------------~~~~~~l~~~-~~~~~ 82 (101)
T PF13344_consen 16 IPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG------------MAAAEYLKEH-KGGKK 82 (101)
T ss_dssp -TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH------------HHHHHHHHHH-TTSSE
T ss_pred CcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH------------HHHHHHHHhc-CCCCE
Confidence 355555555553 45689999853 34455667888875455666544 2233333332 23567
Q ss_pred EEEEeCCccchhHHHhcCC
Q 035566 165 RLFFDDSTRNIECGKSIGL 183 (238)
Q Consensus 165 ~v~vgD~~~di~~a~~~G~ 183 (238)
++++|-. ...+.++.+|+
T Consensus 83 v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 83 VYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEES-H-HHHHHHHHTTE
T ss_pred EEEEcCH-HHHHHHHHcCC
Confidence 8888854 44666666664
No 174
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.43 E-value=0.00027 Score=50.26 Aligned_cols=82 Identities=15% Similarity=0.192 Sum_probs=59.8
Q ss_pred CCCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcc-ccc-ceeeecccCCCCCCCCCchHHHHHHHHhcCCCC
Q 035566 87 NLKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLE-DCF-DGIVNFESLNPTNKTTGQELQLISMLRMVAHHF 162 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~-~~f-~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 162 (238)
.+.++||+.++|+.++.. .+|+|++.+.++..+++.++.. .+| +.+++.++.. .+..|. +-..++.+.
T Consensus 56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~--~~~~Kd------L~~i~~~d~ 127 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESG--SPHTKS------LLRLFPADE 127 (156)
T ss_pred EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCC--CCcccc------HHHHcCCCc
Confidence 357789999999998644 6899999999999999999988 478 6677665432 111111 113357788
Q ss_pred CeEEEEeCCccchh
Q 035566 163 FQRLFFDDSTRNIE 176 (238)
Q Consensus 163 ~~~v~vgD~~~di~ 176 (238)
+.+++|+|++.--.
T Consensus 128 ~~vvivDd~~~~~~ 141 (156)
T TIGR02250 128 SMVVIIDDREDVWP 141 (156)
T ss_pred ccEEEEeCCHHHhh
Confidence 99999999975433
No 175
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.40 E-value=0.00051 Score=62.44 Aligned_cols=115 Identities=16% Similarity=0.206 Sum_probs=74.7
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCC------------------CCCCCCc
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNP------------------TNKTTGQ 147 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~------------------~k~~~~~ 147 (238)
++.|++.+.++.++.. ..++|+........+.+.+|+.. +.++++.+... ..| ..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sP--e~ 625 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTP--LQ 625 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCH--HH
Confidence 5678888888888755 46899988899999999999852 12222222111 011 11
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Cccccccc--cChhHHHHHh
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYAL--ENIHNIREAF 211 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~--~~~~el~~~l 211 (238)
+..+.+.+++ ..+-+.|+||+.||..+.+.+.+. |.++.+.. +..||.++ +++..+...+
T Consensus 626 K~~iV~~Lq~---~G~vVamtGDGvNDaPALk~ADVG-IAmg~gtdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 626 KSRVLKALQA---NGHTVGFLGDGINDAPALRDADVG-ISVDSGADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred HHHHHHHHHh---CCCEEEEECCCchhHHHHHhCCEE-EEeCcccHHHHHhcCEEEecCChHHHHHHH
Confidence 2222223333 345789999999999999999985 55555443 77788887 4566665544
No 176
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.39 E-value=0.00064 Score=61.64 Aligned_cols=115 Identities=14% Similarity=0.235 Sum_probs=73.8
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCC------------------CCCCCCc
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNP------------------TNKTTGQ 147 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~------------------~k~~~~~ 147 (238)
++.|++.+.++.++.. ..++|+........+.+.+|+.. +.++.+.+... ..| ..
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~P--e~ 590 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTP--MQ 590 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCH--HH
Confidence 5678898888888765 46899988899999999999862 12222221111 111 11
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF 211 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l 211 (238)
+..+.+.+++. .+.+.|+||+.||..+.+.+++. +.++.+.. +..||.++- ++..+...+
T Consensus 591 K~~iV~~lq~~---G~vVam~GDGvNDapALk~AdVG-IAmg~gtdvAk~aADiVLldd~~~~I~~ai 654 (867)
T TIGR01524 591 KSRIIGLLKKA---GHTVGFLGDGINDAPALRKADVG-ISVDTAADIAKEASDIILLEKSLMVLEEGV 654 (867)
T ss_pred HHHHHHHHHhC---CCEEEEECCCcccHHHHHhCCEE-EEeCCccHHHHHhCCEEEecCChHHHHHHH
Confidence 22233333333 35789999999999999999985 55555443 677887774 455554443
No 177
>PLN02580 trehalose-phosphatase
Probab=97.32 E-value=0.00093 Score=54.29 Aligned_cols=72 Identities=15% Similarity=0.192 Sum_probs=57.0
Q ss_pred CCCchHHHHHHHHhcCCCCCe---EEEEeCCccchhHHHh-----cCCeEEEecCCCCCccccccccChhHHHHHhHHhh
Q 035566 144 TTGQELQLISMLRMVAHHFFQ---RLFFDDSTRNIECGKS-----IGLHTVLVGTSRRTKGADYALENIHNIREAFPELW 215 (238)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~---~v~vgD~~~di~~a~~-----~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~ 215 (238)
...|...+..+++.+|++..+ .++|||..+|..|.+. .|+ +|.|.++.....|.|.+++.+|+.++|..+.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~ 377 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGY-GILVSSVPKESNAFYSLRDPSEVMEFLKSLV 377 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCce-EEEEecCCCCccceEEcCCHHHHHHHHHHHH
Confidence 345677888889999987653 3899999999999986 354 5677766667789999999999999887654
Q ss_pred h
Q 035566 216 D 216 (238)
Q Consensus 216 ~ 216 (238)
.
T Consensus 378 ~ 378 (384)
T PLN02580 378 T 378 (384)
T ss_pred H
Confidence 3
No 178
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.31 E-value=0.00083 Score=61.07 Aligned_cols=115 Identities=16% Similarity=0.217 Sum_probs=74.1
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCCC------------------CCCCCCc
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNP------------------TNKTTGQ 147 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~------------------~k~~~~~ 147 (238)
++.|++.+.++.++.. ..++|+........+.+.+|+.. +.++++.+... ..| ..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sP--e~ 625 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTP--MH 625 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCH--HH
Confidence 5578888888888755 46899999999999999999852 22333222211 111 11
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF 211 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l 211 (238)
+..+.+.+++ ..+-+.|+||+.||..+.+.+.+. |.++.+.. +..||.++- ++..+.+.+
T Consensus 626 K~~IV~~Lq~---~G~vVam~GDGvNDaPALk~ADVG-IAmg~gtdvAkeaADiVLldd~~~~I~~ai 689 (902)
T PRK10517 626 KERIVTLLKR---EGHVVGFMGDGINDAPALRAADIG-ISVDGAVDIAREAADIILLEKSLMVLEEGV 689 (902)
T ss_pred HHHHHHHHHH---CCCEEEEECCCcchHHHHHhCCEE-EEeCCcCHHHHHhCCEEEecCChHHHHHHH
Confidence 2222222333 335689999999999999999984 55555543 677888774 455555443
No 179
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.24 E-value=0.0033 Score=48.32 Aligned_cols=46 Identities=30% Similarity=0.398 Sum_probs=33.4
Q ss_pred hhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeeccc
Q 035566 92 PVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFES 137 (238)
Q Consensus 92 ~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~ 137 (238)
|.+.+.|..|+.. +++-|.|.+.++...++.+++.++||.+++.+.
T Consensus 145 ~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~ 193 (297)
T PF05152_consen 145 PAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGN 193 (297)
T ss_pred hHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCc
Confidence 3444555555544 467888888899888998888888888876553
No 180
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.19 E-value=0.0015 Score=58.39 Aligned_cols=114 Identities=13% Similarity=0.131 Sum_probs=72.7
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccC------------------------CCC
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESL------------------------NPT 141 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~------------------------~~~ 141 (238)
++.|++.+.++.++.. ..++|+........+.+.+|+.+. +++.+.. ...
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 6678899888888755 568999999999999999998642 1111111 001
Q ss_pred CCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccccc--ChhHHHHHh
Q 035566 142 NKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALE--NIHNIREAF 211 (238)
Q Consensus 142 k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~--~~~el~~~l 211 (238)
.| ..+..+ .+.+.-..+.+.|+||+.||..+.+.+.+. +.++.+.. +..||.++- ++..+...+
T Consensus 519 ~P--e~K~~i---V~~lq~~G~~VamvGDGvNDapAL~~AdVG-IAm~~gtdvAkeaADivLl~d~l~~I~~ai 586 (755)
T TIGR01647 519 FP--EHKYEI---VEILQKRGHLVGMTGDGVNDAPALKKADVG-IAVAGATDAARSAADIVLTEPGLSVIVDAI 586 (755)
T ss_pred CH--HHHHHH---HHHHHhcCCEEEEEcCCcccHHHHHhCCee-EEecCCcHHHHHhCCEEEEcCChHHHHHHH
Confidence 11 011122 233333346799999999999999999985 55555443 666786664 355554443
No 181
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=97.15 E-value=0.0021 Score=47.71 Aligned_cols=100 Identities=12% Similarity=0.127 Sum_probs=67.1
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcC---cccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCC
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLG---LEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHF 162 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~---~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 162 (238)
..++++...++.++.. ++|.|++....+..+..+-+ +..+++.++.. ..+... ....++.+.+.+|.++
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-~iG~K~----e~~sy~~I~~~Ig~s~ 197 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-TIGLKV----ESQSYKKIGHLIGKSP 197 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-ccccee----hhHHHHHHHHHhCCCh
Confidence 5678899999888754 56777766555544444332 22233333221 122211 1334555689999999
Q ss_pred CeEEEEeCCccchhHHHhcCCeEEEecCCCC
Q 035566 163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSRR 193 (238)
Q Consensus 163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~ 193 (238)
.++++.-|-++...+|+.+|+.+..+.++.+
T Consensus 198 ~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgn 228 (254)
T KOG2630|consen 198 REILFLTDVPREAAAARKAGLQAGLVSRPGN 228 (254)
T ss_pred hheEEeccChHHHHHHHhcccceeeeecCCC
Confidence 9999999999999999999999988866654
No 182
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.05 E-value=0.0023 Score=58.75 Aligned_cols=117 Identities=14% Similarity=0.076 Sum_probs=75.9
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccceeeecccCC------------------CCCCCCCc
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLN------------------PTNKTTGQ 147 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~------------------~~k~~~~~ 147 (238)
++.|++.+.++.++.. ..++|+.....+..+.+.+|+...-..++.+.+.. ...| ..
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sP--e~ 656 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSP--LD 656 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCH--HH
Confidence 5678888888888655 46899988999999999999863211222222111 1111 11
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEec-CCCC--Ccccccccc--ChhHHHHHh
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVG-TSRR--TKGADYALE--NIHNIREAF 211 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~-~~~~--~~~ad~v~~--~~~el~~~l 211 (238)
+..+.+.+++. .+.+.|+||+.||..|.+.+.+. |.++ .+.. +..||+++. ++..+...+
T Consensus 657 K~~iV~~lq~~---g~vVam~GDGvNDapALk~AdVG-IAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 657 KQLLVLMLKDM---GEVVAVTGDGTNDAPALKLADVG-FSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred HHHHHHHHHHC---CCEEEEECCCCchHHHHHhCCcc-eecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 22233333443 34789999999999999999875 4444 4433 677898887 677776655
No 183
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.02 E-value=0.0025 Score=58.96 Aligned_cols=119 Identities=9% Similarity=0.066 Sum_probs=74.9
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccccc----------ceeeecccCCCCC-------------
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCF----------DGIVNFESLNPTN------------- 142 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f----------~~i~~~~~~~~~k------------- 142 (238)
++.|++.+.++.++.. ..++|+........+.+.+|+.... ..++++.......
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V 725 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV 725 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence 5678888888888655 4689999999999999999985310 1223322221110
Q ss_pred ---CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEec-CCC--CCccccccccC--hhHHHHHh
Q 035566 143 ---KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVG-TSR--RTKGADYALEN--IHNIREAF 211 (238)
Q Consensus 143 ---~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~-~~~--~~~~ad~v~~~--~~el~~~l 211 (238)
-.+..+..+.+.+++. .+.+.|+||+.||..|.+.+++... ++ ++. .+..||+++.+ +..+...+
T Consensus 726 ~ar~sP~~K~~iV~~lq~~---g~~Vam~GDGvNDapaLk~AdVGIA-mg~~gt~vak~aADivl~dd~f~~I~~~i 798 (1053)
T TIGR01523 726 IARCAPQTKVKMIEALHRR---KAFCAMTGDGVNDSPSLKMANVGIA-MGINGSDVAKDASDIVLSDDNFASILNAI 798 (1053)
T ss_pred EEecCHHHHHHHHHHHHhc---CCeeEEeCCCcchHHHHHhCCccEe-cCCCccHHHHHhcCEEEecCCHHHHHHHH
Confidence 0001112223333333 3568999999999999999998544 43 343 26678988864 66666654
No 184
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=97.02 E-value=0.005 Score=45.37 Aligned_cols=92 Identities=20% Similarity=0.208 Sum_probs=53.1
Q ss_pred CChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcccc--cceeeecccC-------CCCCC-CCCchHHHHHHHHh
Q 035566 90 PDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDC--FDGIVNFESL-------NPTNK-TTGQELQLISMLRM 157 (238)
Q Consensus 90 ~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~--f~~i~~~~~~-------~~~k~-~~~~~~~~~~~~~~ 157 (238)
..|++.++|+.+.+. .+|.|.+...++..++..+++... +...+.-+.. ...++ ..|+-.. +-++
T Consensus 46 kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~---lw~~ 122 (195)
T TIGR02245 46 MRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGV---IWAL 122 (195)
T ss_pred eCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHH---hhhh
Confidence 348899999888654 789999999999999998875321 1111111110 00000 0011111 1234
Q ss_pred cC--CCCCeEEEEeCCccchhHHHhcCCe
Q 035566 158 VA--HHFFQRLFFDDSTRNIECGKSIGLH 184 (238)
Q Consensus 158 ~~--~~~~~~v~vgD~~~di~~a~~~G~~ 184 (238)
++ .+.+++++|+|++....+=-..|+.
T Consensus 123 l~~~~~~~ntiiVDd~p~~~~~~P~N~i~ 151 (195)
T TIGR02245 123 LPEFYSMKNTIMFDDLRRNFLMNPQNGLK 151 (195)
T ss_pred cccCCCcccEEEEeCCHHHHhcCCCCccc
Confidence 44 4779999999998774443334443
No 185
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.01 E-value=0.0025 Score=52.42 Aligned_cols=84 Identities=20% Similarity=0.175 Sum_probs=58.3
Q ss_pred ChhHHHHHhcCCCCeE---EEecCChHHHHHHHHhcCcccccceeeecc-----cCCCCCCCCCchHHHHHHHHhcCCCC
Q 035566 91 DPVLRNLLLSLPIRKV---IFSNADEIHVAKVLRKLGLEDCFDGIVNFE-----SLNPTNKTTGQELQLISMLRMVAHHF 162 (238)
Q Consensus 91 ~~~~~~~l~~l~~~~~---i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~ 162 (238)
+....+++..++.+|+ ++|-+....+..+.+... +.++.-+ ...+.. +..-+..+|+++|+..
T Consensus 257 fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa~~~iNW~~----K~eNirkIAkklNlg~ 327 (574)
T COG3882 257 FKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFAVFQINWDP----KAENIRKIAKKLNLGL 327 (574)
T ss_pred HHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhhhheecCCc----chhhHHHHHHHhCCCc
Confidence 3445566777777754 667677777777776543 2222222 223332 4777888999999999
Q ss_pred CeEEEEeCCccchhHHHhcCC
Q 035566 163 FQRLFFDDSTRNIECGKSIGL 183 (238)
Q Consensus 163 ~~~v~vgD~~~di~~a~~~G~ 183 (238)
+..+|++|++...+-.+.-+-
T Consensus 328 dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 328 DSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred cceEEecCCHHHHHHHHhcCc
Confidence 999999999999888888763
No 186
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.92 E-value=0.0012 Score=60.12 Aligned_cols=110 Identities=11% Similarity=0.129 Sum_probs=70.7
Q ss_pred CCCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccc--eeeecccCCCCCC----------------CCC
Q 035566 88 LKPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFD--GIVNFESLNPTNK----------------TTG 146 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~--~i~~~~~~~~~k~----------------~~~ 146 (238)
-+|.+++.+.++.++.. ...+|+.....+..+.+.+|+...-+ .++.+........ .+.
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 36788898888888755 46899988899999999999775442 2444443322210 001
Q ss_pred chHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Ccccccc
Q 035566 147 QELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYA 200 (238)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v 200 (238)
.+..+.+.+++. .+-+.|.||+.||..|.+.|.+...+...|.+ +..+|.+
T Consensus 626 qK~~IV~~lq~~---g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadiv 678 (917)
T COG0474 626 QKARIVEALQKS---GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIV 678 (917)
T ss_pred HHHHHHHHHHhC---CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceE
Confidence 111222223333 45689999999999999999987656654543 4555544
No 187
>PLN02645 phosphoglycolate phosphatase
Probab=96.77 E-value=0.0078 Score=48.07 Aligned_cols=86 Identities=14% Similarity=0.075 Sum_probs=57.9
Q ss_pred CChhHHHHHhcCCC---CeEEEecCCh---HHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCC
Q 035566 90 PDPVLRNLLLSLPI---RKVIFSNADE---IHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFF 163 (238)
Q Consensus 90 ~~~~~~~~l~~l~~---~~~i~t~~~~---~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 163 (238)
++||+.++|+.++. +.+++||++. ......++.+|+...++.++++.. .....++..+....
T Consensus 45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~------------~~~~~l~~~~~~~~ 112 (311)
T PLN02645 45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSF------------AAAAYLKSINFPKD 112 (311)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHH------------HHHHHHHhhccCCC
Confidence 34777777776654 4679999873 344455677888766666765432 23344555565444
Q ss_pred eEEEEeCCccchhHHHhcCCeEEE
Q 035566 164 QRLFFDDSTRNIECGKSIGLHTVL 187 (238)
Q Consensus 164 ~~v~vgD~~~di~~a~~~G~~~i~ 187 (238)
..++++++..+...++.+|+..+.
T Consensus 113 ~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 113 KKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred CEEEEEcCHHHHHHHHHCCCEEec
Confidence 568888888889999999997654
No 188
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=96.73 E-value=0.0029 Score=55.50 Aligned_cols=132 Identities=10% Similarity=0.140 Sum_probs=84.1
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccc----eeeecccCCCCCCC----------------C
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFD----GIVNFESLNPTNKT----------------T 145 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~----~i~~~~~~~~~k~~----------------~ 145 (238)
+|.+++.+.++.++.. ...+|+........+.+++|+...-+ ..+++.+++...+. +
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P 663 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEP 663 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCc
Confidence 7788898888887655 45899999999999999999765444 23333333322210 0
Q ss_pred CchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--CccccccccChhHHHHHhHHhhhccccccc
Q 035566 146 GQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYALENIHNIREAFPELWDADEISKN 223 (238)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~~~~~el~~~l~~~~~~~~~~~~ 223 (238)
.++..+. +.|.-..+=+-|-||+.||-.+.+.+.+...+-.+|.. +..+|.|..+ +++..++..+-+.+++..+
T Consensus 664 ~HK~kIV---eaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~D-DnFstIvaAVEEGr~IynN 739 (972)
T KOG0202|consen 664 QHKLKIV---EALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLAD-DNFSTIVAAVEEGRAIYNN 739 (972)
T ss_pred hhHHHHH---HHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEec-CcHHHHHHHHHHhHHHHHH
Confidence 1222233 33333345688899999999999999986444435543 6677777643 4455555555555555554
Q ss_pred c
Q 035566 224 I 224 (238)
Q Consensus 224 ~ 224 (238)
+
T Consensus 740 i 740 (972)
T KOG0202|consen 740 I 740 (972)
T ss_pred H
Confidence 4
No 189
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.67 E-value=0.013 Score=43.44 Aligned_cols=22 Identities=9% Similarity=0.018 Sum_probs=18.0
Q ss_pred eEEEEeCCccchhHHHhcCCeE
Q 035566 164 QRLFFDDSTRNIECGKSIGLHT 185 (238)
Q Consensus 164 ~~v~vgD~~~di~~a~~~G~~~ 185 (238)
-++.+||++||+.+..-....+
T Consensus 211 ~t~~~GDg~nD~Pl~ev~d~Af 232 (274)
T COG3769 211 TTLGLGDGPNDAPLLEVMDYAF 232 (274)
T ss_pred EEEecCCCCCcccHHHhhhhhe
Confidence 4889999999999988776533
No 190
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.66 E-value=0.0082 Score=55.51 Aligned_cols=120 Identities=11% Similarity=0.100 Sum_probs=73.7
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccccc------------------------eeeecccCCCC
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDCFD------------------------GIVNFESLNPT 141 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~f~------------------------~i~~~~~~~~~ 141 (238)
++.+++.+.++.++.. ..++|+.....+..+.+.+|+..--. .++++.+....
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 4578888888888755 46899988888999999988742100 12222221111
Q ss_pred C------------------CCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC--Cccccccc
Q 035566 142 N------------------KTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR--TKGADYAL 201 (238)
Q Consensus 142 k------------------~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~--~~~ad~v~ 201 (238)
. -.+..+..+.+.+++.| .-+.|+||+.||..|.+.+.+...+-..|.+ +..||+++
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g---~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL 724 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQG---AIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMIL 724 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCC---CEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEE
Confidence 0 00011222223334443 4688999999999999999985443334443 66789887
Q ss_pred cC--hhHHHHHh
Q 035566 202 EN--IHNIREAF 211 (238)
Q Consensus 202 ~~--~~el~~~l 211 (238)
.+ +.-+.+.+
T Consensus 725 ~dd~f~~Iv~ai 736 (997)
T TIGR01106 725 LDDNFASIVTGV 736 (997)
T ss_pred ecCCHHHHHHHH
Confidence 76 66666544
No 191
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=96.44 E-value=0.047 Score=45.84 Aligned_cols=33 Identities=12% Similarity=0.262 Sum_probs=24.2
Q ss_pred hHHHHHhcCCCCeEEEecCChHHHHHHHHh-cCcc
Q 035566 93 VLRNLLLSLPIRKVIFSNADEIHVAKVLRK-LGLE 126 (238)
Q Consensus 93 ~~~~~l~~l~~~~~i~t~~~~~~~~~~l~~-~~~~ 126 (238)
..-+.....+ +.+++|.+++.+++..++. +|.+
T Consensus 100 e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 100 EAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred HHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc
Confidence 3444444433 6789999999999999998 7755
No 192
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.11 E-value=0.0059 Score=43.56 Aligned_cols=20 Identities=10% Similarity=0.223 Sum_probs=16.5
Q ss_pred EEEeCCccchhHHHhcCCeE
Q 035566 166 LFFDDSTRNIECGKSIGLHT 185 (238)
Q Consensus 166 v~vgD~~~di~~a~~~G~~~ 185 (238)
..|||+.+|+.+=+.+|++.
T Consensus 123 ~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 123 AGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred EEeCCCchhHHHHHHcCCCh
Confidence 35888899999999999853
No 193
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.95 E-value=0.039 Score=49.17 Aligned_cols=107 Identities=14% Similarity=0.193 Sum_probs=64.4
Q ss_pred CChhHHHH---HhcCCCCeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEE
Q 035566 90 PDPVLRNL---LLSLPIRKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRL 166 (238)
Q Consensus 90 ~~~~~~~~---l~~l~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v 166 (238)
+.|++... |+++..+.+++|+......+.+.+++| ++.++..- .... +...+. ++.-....+.
T Consensus 724 vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~aev-~P~~-----K~~~Ik----~lq~~~~~Va 789 (951)
T KOG0207|consen 724 VRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYAEV-LPEQ-----KAEKIK----EIQKNGGPVA 789 (951)
T ss_pred cchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEecc-Cchh-----hHHHHH----HHHhcCCcEE
Confidence 34555554 455556678999999999999999999 44444322 1111 122232 2322336689
Q ss_pred EEeCCccchhHHHhcCCeEEEecCCC--CCcccccccc--ChhHHHHHh
Q 035566 167 FFDDSTRNIECGKSIGLHTVLVGTSR--RTKGADYALE--NIHNIREAF 211 (238)
Q Consensus 167 ~vgD~~~di~~a~~~G~~~i~v~~~~--~~~~ad~v~~--~~~el~~~l 211 (238)
||||+.||-.+...+.+. +.++.+. ....+|.++- ++.++...+
T Consensus 790 MVGDGINDaPALA~AdVG-Iaig~gs~vAieaADIVLmrn~L~~v~~ai 837 (951)
T KOG0207|consen 790 MVGDGINDAPALAQADVG-IAIGAGSDVAIEAADIVLMRNDLRDVPFAI 837 (951)
T ss_pred EEeCCCCccHHHHhhccc-eeeccccHHHHhhCCEEEEccchhhhHHHH
Confidence 999999998887777663 4444443 3556776543 444444433
No 194
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=95.91 E-value=0.0043 Score=42.32 Aligned_cols=14 Identities=29% Similarity=0.496 Sum_probs=12.8
Q ss_pred eEEEEecCCceeeC
Q 035566 5 ECLLFDVDDTLYSH 18 (238)
Q Consensus 5 k~vifD~DGTL~~~ 18 (238)
|+|+||+||||+..
T Consensus 2 K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 2 KRLVMDLDNTITLT 15 (126)
T ss_pred CEEEEeCCCCcccC
Confidence 79999999999874
No 195
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=95.88 E-value=0.065 Score=40.50 Aligned_cols=81 Identities=9% Similarity=0.039 Sum_probs=58.0
Q ss_pred eEEEecCChHHHHHHHHhcCcccccc--eeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcC
Q 035566 105 KVIFSNADEIHVAKVLRKLGLEDCFD--GIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIG 182 (238)
Q Consensus 105 ~~i~t~~~~~~~~~~l~~~~~~~~f~--~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G 182 (238)
.+++|++.--......=.++++.+|. .++++...+ +..-+..+.+++|-+...-++|||+...=.+|+..+
T Consensus 178 NvLVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~kvG-------K~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~ 250 (274)
T TIGR01658 178 NVLVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIKVG-------KLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMN 250 (274)
T ss_pred EEEEEcCccHHHHHHHHHhccCCccccccccchhhcc-------hHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcC
Confidence 36888875544444444567877774 455544332 244455568899987789999999999999999999
Q ss_pred CeEEEecCCC
Q 035566 183 LHTVLVGTSR 192 (238)
Q Consensus 183 ~~~i~v~~~~ 192 (238)
|+++-++...
T Consensus 251 wPFw~I~~h~ 260 (274)
T TIGR01658 251 WPFVKIDLHP 260 (274)
T ss_pred CCeEEeecCC
Confidence 9999887654
No 196
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.77 E-value=0.018 Score=53.68 Aligned_cols=49 Identities=10% Similarity=0.146 Sum_probs=38.4
Q ss_pred CCeEEEEeCCccchhHHHhcCCeEEEecCCC---CCccccccccChhHHHHHh
Q 035566 162 FFQRLFFDDSTRNIECGKSIGLHTVLVGTSR---RTKGADYALENIHNIREAF 211 (238)
Q Consensus 162 ~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~---~~~~ad~v~~~~~el~~~l 211 (238)
.+-+.++||+.||+.|.+.|.+. |++...+ ....+|+++.++..|.+++
T Consensus 768 ~~~vl~iGDG~ND~~mlk~AdVG-Igi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 768 GKTTLAIGDGANDVSMIQEADVG-VGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred CCeEEEEeCCCccHHHHhhcCee-eEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 35799999999999999999874 4553322 3567999999988887765
No 197
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=95.13 E-value=0.061 Score=41.71 Aligned_cols=69 Identities=14% Similarity=0.154 Sum_probs=40.3
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcC---CeEEEecCCCCCccccccccChhHHHHHhHHhhhcc
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIG---LHTVLVGTSRRTKGADYALENIHNIREAFPELWDAD 218 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G---~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~~~ 218 (238)
...+..+.++...+..-.++.||...|=.+...+. -.++-+..+ ..++++...........+..+....
T Consensus 184 G~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~--~t~a~~~~~~~~~~~~~l~~~~~~~ 255 (266)
T COG1877 184 GAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG--STQAKFRLAGVYGFLRSLYKLLEAL 255 (266)
T ss_pred HHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC--cccccccccccHHHHHHHHHHHHHh
Confidence 44444457777766566899999999977777765 445555444 3444444444444444444444443
No 198
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=95.09 E-value=0.11 Score=36.90 Aligned_cols=19 Identities=16% Similarity=0.331 Sum_probs=16.3
Q ss_pred EEEeCCccchhHHHhcCCe
Q 035566 166 LFFDDSTRNIECGKSIGLH 184 (238)
Q Consensus 166 v~vgD~~~di~~a~~~G~~ 184 (238)
..||.+.+|+.+=+++|++
T Consensus 123 agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 123 AGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred EecCCcHHHHHHHHHcCCC
Confidence 3489999999999999984
No 199
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=94.99 E-value=0.11 Score=44.60 Aligned_cols=94 Identities=12% Similarity=0.176 Sum_probs=62.1
Q ss_pred CCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeE
Q 035566 89 KPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQR 165 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 165 (238)
++.+++.+.++.++. +..++|+........+.+.+|+ + ....| ... .++.+.+.-....+
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~-----~~~~p----~~K-~~~v~~l~~~g~~v 409 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------F-----ARVTP----EEK-AALVEALQKKGRVV 409 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------e-----eccCH----HHH-HHHHHHHHHCCCEE
Confidence 556778777777754 3568999998899999999886 1 11111 211 12223222223679
Q ss_pred EEEeCCccchhHHHhcCCeEEEecCCCCCccccccccC
Q 035566 166 LFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALEN 203 (238)
Q Consensus 166 v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~ 203 (238)
.|+||+.||..+.+.+++. +.++ ....+|.++.+
T Consensus 410 ~~vGDg~nD~~al~~Advg-ia~~---a~~~adivl~~ 443 (499)
T TIGR01494 410 AMTGDGVNDAPALKKADVG-IAMG---AKAAADIVLLD 443 (499)
T ss_pred EEECCChhhHHHHHhCCCc-cccc---hHHhCCeEEec
Confidence 9999999999999999865 4443 35567877765
No 200
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=94.69 E-value=0.27 Score=46.13 Aligned_cols=38 Identities=16% Similarity=0.312 Sum_probs=31.0
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcc
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLE 126 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~ 126 (238)
++.|++.+.++.++.. ..++|+.....+..+.+..|+-
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 4678888888888655 4689998889999999999984
No 201
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=94.58 E-value=0.043 Score=43.56 Aligned_cols=99 Identities=20% Similarity=0.180 Sum_probs=63.3
Q ss_pred ChhHHHHHhcCC---CCeEEEecCChHHHHHHHHhc---CcccccceeeecccCC-----CCCCCC--------------
Q 035566 91 DPVLRNLLLSLP---IRKVIFSNADEIHVAKVLRKL---GLEDCFDGIVNFESLN-----PTNKTT-------------- 145 (238)
Q Consensus 91 ~~~~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~---~~~~~f~~i~~~~~~~-----~~k~~~-------------- 145 (238)
.|....+|+.|+ ++.+++||++...+..-++.+ .+.++||.++.-.... ..+|-.
T Consensus 242 ~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv 321 (510)
T KOG2470|consen 242 NPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKV 321 (510)
T ss_pred cHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhh
Confidence 355666666664 447899999988887666654 4557888876433211 111100
Q ss_pred --------CchHHHHHHHHhcCCCCCeEEEEeCCc-cchhHHH-hcCCeEEEec
Q 035566 146 --------GQELQLISMLRMVAHHFFQRLFFDDST-RNIECGK-SIGLHTVLVG 189 (238)
Q Consensus 146 --------~~~~~~~~~~~~~~~~~~~~v~vgD~~-~di~~a~-~~G~~~i~v~ 189 (238)
=....++++++.-|....++++|||++ .|+.-.. +.||.+-++-
T Consensus 322 ~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 322 DKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 012234555677788888999999995 6666555 8999887663
No 202
>PLN02151 trehalose-phosphatase
Probab=94.40 E-value=0.16 Score=41.16 Aligned_cols=70 Identities=19% Similarity=0.274 Sum_probs=52.3
Q ss_pred CchHHHHHHHHhcCCCCC---eEEEEeCCccchhHHHhc-----CCeEEEecCCCCCccccccccChhHHHHHhHHhhh
Q 035566 146 GQELQLISMLRMVAHHFF---QRLFFDDSTRNIECGKSI-----GLHTVLVGTSRRTKGADYALENIHNIREAFPELWD 216 (238)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~---~~v~vgD~~~di~~a~~~-----G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~ 216 (238)
.+...+..+++.+++... -.+|+||-..|-.+.+.+ |+ .|.|+.+.....|+|.+++.+|+.++|..+..
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 456777777888876533 279999999997777654 43 46666545567899999999999999877654
No 203
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=94.37 E-value=0.049 Score=37.34 Aligned_cols=99 Identities=19% Similarity=0.169 Sum_probs=55.8
Q ss_pred CCCCChhHHHHHhcCCC--CeEEEecC--ChHHHHHHHHhcCcccccce-----eeecccCCCCCCCCCchHHHHHHHHh
Q 035566 87 NLKPDPVLRNLLLSLPI--RKVIFSNA--DEIHVAKVLRKLGLEDCFDG-----IVNFESLNPTNKTTGQELQLISMLRM 157 (238)
Q Consensus 87 ~~~~~~~~~~~l~~l~~--~~~i~t~~--~~~~~~~~l~~~~~~~~f~~-----i~~~~~~~~~k~~~~~~~~~~~~~~~ 157 (238)
.+...|++.+.++.|-. ..+|+|.. .........+++ .++|.. ++.|..
T Consensus 66 nL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl--~E~FPFi~~qn~vfCgn-------------------- 123 (180)
T COG4502 66 NLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWL--KEKFPFISYQNIVFCGN-------------------- 123 (180)
T ss_pred hcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHH--HHHCCCCChhhEEEecC--------------------
Confidence 45667888888888854 46777765 334444444442 222322 222221
Q ss_pred cCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCC-ccccccccChhHHHHHh
Q 035566 158 VAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRT-KGADYALENIHNIREAF 211 (238)
Q Consensus 158 ~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~-~~ad~v~~~~~el~~~l 211 (238)
-|+- +-=++|+|++.+++... |.+ |++...... ..-=..+.++.|+.+.+
T Consensus 124 Kniv-kaDilIDDnp~nLE~F~--G~k-IlFdA~HN~nenRF~Rv~~W~e~eq~l 174 (180)
T COG4502 124 KNIV-KADILIDDNPLNLENFK--GNK-ILFDAHHNKNENRFVRVRDWYEAEQAL 174 (180)
T ss_pred CCeE-EeeEEecCCchhhhhcc--Cce-EEEecccccCccceeeeccHHHHHHHH
Confidence 1211 12378999999998776 433 555444432 22334578899888654
No 204
>PLN03190 aminophospholipid translocase; Provisional
Probab=94.15 E-value=0.088 Score=49.57 Aligned_cols=48 Identities=10% Similarity=0.135 Sum_probs=38.8
Q ss_pred CeEEEEeCCccchhHHHhcCCeEEEecCCC---CCccccccccChhHHHHHh
Q 035566 163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSR---RTKGADYALENIHNIREAF 211 (238)
Q Consensus 163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~---~~~~ad~v~~~~~el~~~l 211 (238)
.-++++||+.||+.|.+.|.+. |++...+ ....+|+.+..+..|.++|
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVG-IGIsG~EG~qA~~aSDfaI~~Fr~L~rLL 922 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVG-VGISGQEGRQAVMASDFAMGQFRFLVPLL 922 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCee-eeecCchhHHHHHhhccchhhhHHHHHHH
Confidence 4689999999999999999874 4554333 3667899999999998876
No 205
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=93.69 E-value=0.58 Score=35.82 Aligned_cols=106 Identities=13% Similarity=0.212 Sum_probs=55.2
Q ss_pred CCChHhHHHhhhCCCCCCCCCCChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCccccccee--ee----ccc--
Q 035566 69 DFDNDDYHSFVHGRLPYENLKPDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGI--VN----FES-- 137 (238)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i--~~----~~~-- 137 (238)
.+......+.+.. ..+...+|+.++++.|.. +..|+|.+-...+..++++.+.. ++.+ ++ .++
T Consensus 74 ~l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~--~~Nv~VvSN~M~Fd~~g 147 (246)
T PF05822_consen 74 GLTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVF--HPNVKVVSNFMDFDEDG 147 (246)
T ss_dssp T-BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT----BTTEEEEEE-EEE-TTS
T ss_pred CcCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCC--CCCeEEEeeeEEECCcc
Confidence 3344445554443 346777888888877754 46799999999999999987543 2221 11 000
Q ss_pred --CCCCCCCC---CchHHHHH---HHHhcCCCCCeEEEEeCCccchhHHHhc
Q 035566 138 --LNPTNKTT---GQELQLIS---MLRMVAHHFFQRLFFDDSTRNIECGKSI 181 (238)
Q Consensus 138 --~~~~k~~~---~~~~~~~~---~~~~~~~~~~~~v~vgD~~~di~~a~~~ 181 (238)
.+...|.. .+...... ..+.+. ...+++..||+.-|+.|+..+
T Consensus 148 ~l~gF~~~lIH~~NKn~~~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 148 VLVGFKGPLIHTFNKNESALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp BEEEE-SS---TT-HHHHHHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-
T ss_pred eEeecCCCceEEeeCCcccccCchHHHHhc-cCCcEEEecCccCChHhhcCC
Confidence 00111100 11222221 112222 347899999999999999877
No 206
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.16 E-value=0.33 Score=40.23 Aligned_cols=95 Identities=14% Similarity=0.100 Sum_probs=67.8
Q ss_pred CChhHHHHHhcCC---CCeEEEecC--ChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHH-HHhcCCCCC
Q 035566 90 PDPVLRNLLLSLP---IRKVIFSNA--DEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISM-LRMVAHHFF 163 (238)
Q Consensus 90 ~~~~~~~~l~~l~---~~~~i~t~~--~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~ 163 (238)
|.....++.+... .+.+++|+- +...++..+...|.+.+--.++.+.+....| +...++.+ ++.-+++|.
T Consensus 100 pn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~K----nSg~LFk~Vlk~EnVd~~ 175 (635)
T COG5610 100 PNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLKK----NSGNLFKAVLKLENVDPK 175 (635)
T ss_pred ccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehhc----ccchHHHHHHhhcCCChh
Confidence 3344455555543 345677774 6677788888888775444466666666555 47778887 677789999
Q ss_pred eEEEEeCCc-cchhHHHhcCCeEEEe
Q 035566 164 QRLFFDDST-RNIECGKSIGLHTVLV 188 (238)
Q Consensus 164 ~~v~vgD~~-~di~~a~~~G~~~i~v 188 (238)
.++.+||.. .|..++++.|+.+...
T Consensus 176 ~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 176 KWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred heEEecCchhhhhcCccccchhHHHH
Confidence 999999985 6699999999977643
No 207
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=93.15 E-value=0.53 Score=36.16 Aligned_cols=72 Identities=19% Similarity=0.275 Sum_probs=44.4
Q ss_pred CCeEEEecCChHHHH---HHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHH
Q 035566 103 IRKVIFSNADEIHVA---KVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGK 179 (238)
Q Consensus 103 ~~~~i~t~~~~~~~~---~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~ 179 (238)
.+.+++|....+.-. ..|+.+|+. +|..+.-... ++..+ ++.++- . +||+|....++.|.
T Consensus 187 iRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLgG~--------~K~~v---L~~~~p--h--IFFDDQ~~H~~~a~ 249 (264)
T PF06189_consen 187 IRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLGGL--------PKGPV---LKAFRP--H--IFFDDQDGHLESAS 249 (264)
T ss_pred eEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhCCC--------chhHH---HHhhCC--C--EeecCchhhhhHhh
Confidence 346788886554334 445555655 5543322211 13333 344433 3 99999999999999
Q ss_pred hcCCeEEEecCCC
Q 035566 180 SIGLHTVLVGTSR 192 (238)
Q Consensus 180 ~~G~~~i~v~~~~ 192 (238)
.+++++.|..+.
T Consensus 250 -~~vps~hVP~gv 261 (264)
T PF06189_consen 250 -KVVPSGHVPYGV 261 (264)
T ss_pred -cCCCEEeccCCc
Confidence 778888887764
No 208
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=91.96 E-value=0.92 Score=35.66 Aligned_cols=83 Identities=14% Similarity=0.107 Sum_probs=48.7
Q ss_pred ChhHHHHHhcCCC---CeEEEecCC---hHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566 91 DPVLRNLLLSLPI---RKVIFSNAD---EIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ 164 (238)
Q Consensus 91 ~~~~~~~l~~l~~---~~~i~t~~~---~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 164 (238)
+|++.++|+.++. +.+++||+. .......++.+|+....+.++++ ......++++......+
T Consensus 20 ~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts------------~~~~~~~l~~~~~~~~~ 87 (279)
T TIGR01452 20 VPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSS------------ALCAARLLRQPPDAPKA 87 (279)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecH------------HHHHHHHHHhhCcCCCE
Confidence 4566677766654 357899864 33444567778876444444432 22233444554444577
Q ss_pred EEEEeCCccchhHHHhcCCeEE
Q 035566 165 RLFFDDSTRNIECGKSIGLHTV 186 (238)
Q Consensus 165 ~v~vgD~~~di~~a~~~G~~~i 186 (238)
++++|+. .-...++..|+..+
T Consensus 88 v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 88 VYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred EEEEcCH-HHHHHHHHCCCEEe
Confidence 9999975 23556677787644
No 209
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=91.70 E-value=0.21 Score=38.36 Aligned_cols=16 Identities=31% Similarity=0.490 Sum_probs=13.6
Q ss_pred ceeEEEEecCCceeeC
Q 035566 3 KYECLLFDVDDTLYSH 18 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~ 18 (238)
+..+++||+||||++.
T Consensus 2 ~~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEI 17 (244)
T ss_pred CcEEEEEecCccccCC
Confidence 4578999999999984
No 210
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=91.64 E-value=1.2 Score=34.77 Aligned_cols=51 Identities=22% Similarity=0.162 Sum_probs=34.6
Q ss_pred CCCCCChhHHHHHhcCCCC---eEEEecCChHH---HHHHHHh-cCcccccceeeecc
Q 035566 86 ENLKPDPVLRNLLLSLPIR---KVIFSNADEIH---VAKVLRK-LGLEDCFDGIVNFE 136 (238)
Q Consensus 86 ~~~~~~~~~~~~l~~l~~~---~~i~t~~~~~~---~~~~l~~-~~~~~~f~~i~~~~ 136 (238)
....++||+.++|+.|+.+ .+++||++... ....++. .+.+...+.++++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 4467889999999988654 57899986543 3344444 55655666777655
No 211
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=90.29 E-value=0.65 Score=39.31 Aligned_cols=88 Identities=14% Similarity=0.203 Sum_probs=60.5
Q ss_pred CChhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEE
Q 035566 90 PDPVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRL 166 (238)
Q Consensus 90 ~~~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v 166 (238)
..||++|-+.+++. +.+.+|+.++-....+.+..|+++|.-. .+| ...+ ..+++..-..+=+-
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe---------atP----EdK~-~~I~~eQ~~grlVA 513 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE---------ATP----EDKL-ALIRQEQAEGRLVA 513 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc---------CCh----HHHH-HHHHHHHhcCcEEE
Confidence 34888887777654 4578999888888889999998765321 222 3333 33344444456688
Q ss_pred EEeCCccchhHHHhcCCeEEEecCCC
Q 035566 167 FFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 167 ~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
|.||+.||-.+...+... +.+|+|-
T Consensus 514 MtGDGTNDAPALAqAdVg-~AMNsGT 538 (681)
T COG2216 514 MTGDGTNDAPALAQADVG-VAMNSGT 538 (681)
T ss_pred EcCCCCCcchhhhhcchh-hhhcccc
Confidence 999999999999999874 5555554
No 212
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=90.18 E-value=0.34 Score=35.57 Aligned_cols=28 Identities=25% Similarity=0.292 Sum_probs=22.9
Q ss_pred eEEEEecCCceeeCccchhhHHHHHHHH
Q 035566 5 ECLLFDVDDTLYSHSYGFSNKCSKNIEE 32 (238)
Q Consensus 5 k~vifD~DGTL~~~~~~~~~~~~~~~~~ 32 (238)
-+++||+||||......+.+.+.+.+..
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~ 39 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPEMLEFLQK 39 (252)
T ss_pred eEEEEecCCccccccccCCHHHHHHHHH
Confidence 3899999999999888888887765544
No 213
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=89.10 E-value=1.1 Score=40.31 Aligned_cols=119 Identities=9% Similarity=0.039 Sum_probs=69.8
Q ss_pred CCChhHHHHHhcCCCCeE---EEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHH----------
Q 035566 89 KPDPVLRNLLLSLPIRKV---IFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISML---------- 155 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~~~---i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~---------- 155 (238)
+..||+++.++.++..++ -+|+.+-...+.+....|+-..=+.....+...+.+- .+.+..++.
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~---s~ee~~~i~pkl~VlARSS 723 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFREL---SQEERDKIWPKLRVLARSS 723 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhc---CHHHHHhhhhhheeeecCC
Confidence 447999999998887754 7888888888888888876533221111111111110 122222222
Q ss_pred --------HhcCCCCCeEE-EEeCCccchhHHHhcCCeEEEecCCC--CCcccccccc--ChhHHHHHh
Q 035566 156 --------RMVAHHFFQRL-FFDDSTRNIECGKSIGLHTVLVGTSR--RTKGADYALE--NIHNIREAF 211 (238)
Q Consensus 156 --------~~~~~~~~~~v-~vgD~~~di~~a~~~G~~~i~v~~~~--~~~~ad~v~~--~~~el~~~l 211 (238)
+.+- ...++| +-||+.||-.+.+.+.+...+--.|- .++.+|.++- +|.-+...+
T Consensus 724 P~DK~lLVk~L~-~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v 791 (1034)
T KOG0204|consen 724 PNDKHLLVKGLI-KQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAV 791 (1034)
T ss_pred CchHHHHHHHHH-hcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHH
Confidence 1111 223344 46899999999999998766544443 3777887764 355554443
No 214
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=88.39 E-value=7.9 Score=29.88 Aligned_cols=122 Identities=11% Similarity=0.035 Sum_probs=59.3
Q ss_pred hhHHHHHhcCC---CCeEEEecC---ChHHHHHHHHhcCcccccceeeecccC-----CCCCCCC----CchHHHHHHHH
Q 035566 92 PVLRNLLLSLP---IRKVIFSNA---DEIHVAKVLRKLGLEDCFDGIVNFESL-----NPTNKTT----GQELQLISMLR 156 (238)
Q Consensus 92 ~~~~~~l~~l~---~~~~i~t~~---~~~~~~~~l~~~~~~~~f~~i~~~~~~-----~~~k~~~----~~~~~~~~~~~ 156 (238)
|++.++|+.++ .+.+++||+ ........++.+|+....+.++++... ...++.. --...+.+.++
T Consensus 20 ~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~l~~~l~ 99 (249)
T TIGR01457 20 PEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATADYMNDLKLEKTVYVIGEEGLKEAIK 99 (249)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHHHHHhcCCCCEEEEEcChhHHHHHH
Confidence 44556665554 445788873 456666778888887666666655321 0000000 01133555566
Q ss_pred hcCCC----CCeEEEEeC-Cccch---hH-HH--hcCCeEEEecCCCCCccccccccChhHHHHHhHH
Q 035566 157 MVAHH----FFQRLFFDD-STRNI---EC-GK--SIGLHTVLVGTSRRTKGADYALENIHNIREAFPE 213 (238)
Q Consensus 157 ~~~~~----~~~~v~vgD-~~~di---~~-a~--~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~ 213 (238)
..|+. ..+.|++|. ...+. .. .. ..|...+..|.+...+..+-.+....-+...+..
T Consensus 100 ~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~D~~~~~~~~~~~~~G~~~~~i~~ 167 (249)
T TIGR01457 100 EAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNGDLAIPTERGLLPGNGSLITVLEV 167 (249)
T ss_pred HcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECCCCCCCCCCCCCCCcHHHHHHHHH
Confidence 66642 235666764 33332 21 11 3477755555444333233233444444444443
No 215
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=87.50 E-value=1.6 Score=38.54 Aligned_cols=60 Identities=8% Similarity=0.147 Sum_probs=40.6
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC---CCccccccccChhHHHHHh
Q 035566 149 LQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR---RTKGADYALENIHNIREAF 211 (238)
Q Consensus 149 ~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~---~~~~ad~v~~~~~el~~~l 211 (238)
..+-+.+++. ...++..|||+-||+.|.+.+.+. |++...+ ..-.||+-+..+..+.+++
T Consensus 770 A~v~~llq~~--t~krvc~IGDGGNDVsMIq~A~~G-iGI~gkEGkQASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 770 AQVVRLLQKK--TGKRVCAIGDGGNDVSMIQAADVG-IGIVGKEGKQASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred HHHHHHHHHh--hCceEEEEcCCCccchheeecccc-eeeecccccccchhccccHHHHHHHHHHh
Confidence 3344444443 337899999999999999988763 4442222 2446898888888888765
No 216
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=87.32 E-value=4.1 Score=33.21 Aligned_cols=78 Identities=12% Similarity=0.155 Sum_probs=53.1
Q ss_pred EEEecCChHHHHHHHHhcCcccccc--eeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCC
Q 035566 106 VIFSNADEIHVAKVLRKLGLEDCFD--GIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGL 183 (238)
Q Consensus 106 ~i~t~~~~~~~~~~l~~~~~~~~f~--~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~ 183 (238)
+++|+.........+=.+|+...|. .|++....+ +..-+..+..++|- ....++|||+...-.+|++..|
T Consensus 374 VlvTttqLipalaKvLL~gLg~~fpiENIYSa~kiG-------KescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~ 445 (468)
T KOG3107|consen 374 VLVTTTQLIPALAKVLLYGLGSSFPIENIYSATKIG-------KESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNM 445 (468)
T ss_pred EEEeccchhHHHHHHHHHhcCCcccchhhhhhhhcc-------HHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCC
Confidence 5777765444434444457766663 455544333 24445556888986 5678889999888999999999
Q ss_pred eEEEecCC
Q 035566 184 HTVLVGTS 191 (238)
Q Consensus 184 ~~i~v~~~ 191 (238)
+++-++..
T Consensus 446 PfwrI~~h 453 (468)
T KOG3107|consen 446 PFWRISSH 453 (468)
T ss_pred ceEeeccC
Confidence 99887654
No 217
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=86.83 E-value=3.8 Score=29.14 Aligned_cols=13 Identities=23% Similarity=0.427 Sum_probs=11.6
Q ss_pred EEEEecCCceeeC
Q 035566 6 CLLFDVDDTLYSH 18 (238)
Q Consensus 6 ~vifD~DGTL~~~ 18 (238)
+|++|+||||+++
T Consensus 1 iVisDIDGTL~~s 13 (157)
T smart00775 1 IVISDIDGTITKS 13 (157)
T ss_pred CEEEecCCCCccc
Confidence 4899999999995
No 218
>PLN02151 trehalose-phosphatase
Probab=86.83 E-value=0.65 Score=37.71 Aligned_cols=28 Identities=21% Similarity=0.271 Sum_probs=18.7
Q ss_pred eEEEEecCCceee----Ccc-chhhHHHHHHHH
Q 035566 5 ECLLFDVDDTLYS----HSY-GFSNKCSKNIEE 32 (238)
Q Consensus 5 k~vifD~DGTL~~----~~~-~~~~~~~~~~~~ 32 (238)
.++++|+||||.+ ... .+......++.+
T Consensus 99 ~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~ 131 (354)
T PLN02151 99 IVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRK 131 (354)
T ss_pred eEEEEecCccCCCCCCCcccccCCHHHHHHHHH
Confidence 5889999999994 233 345555555554
No 219
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=84.41 E-value=0.62 Score=38.46 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=14.1
Q ss_pred ceeEEEEecCCceeeC
Q 035566 3 KYECLLFDVDDTLYSH 18 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~ 18 (238)
+.++|++|+||||+.+
T Consensus 374 n~kiVVsDiDGTITkS 389 (580)
T COG5083 374 NKKIVVSDIDGTITKS 389 (580)
T ss_pred CCcEEEEecCCcEEeh
Confidence 3689999999999995
No 220
>PLN02580 trehalose-phosphatase
Probab=82.20 E-value=0.73 Score=37.88 Aligned_cols=15 Identities=33% Similarity=0.332 Sum_probs=12.3
Q ss_pred eeEEEEecCCceeeC
Q 035566 4 YECLLFDVDDTLYSH 18 (238)
Q Consensus 4 ~k~vifD~DGTL~~~ 18 (238)
-.+++||+||||.+-
T Consensus 119 ~~~LfLDyDGTLaPI 133 (384)
T PLN02580 119 KIALFLDYDGTLSPI 133 (384)
T ss_pred CeEEEEecCCccCCC
Confidence 358899999999873
No 221
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=81.73 E-value=1.1 Score=31.41 Aligned_cols=16 Identities=31% Similarity=0.559 Sum_probs=13.7
Q ss_pred eeEEEEecCCceeeCc
Q 035566 4 YECLLFDVDDTLYSHS 19 (238)
Q Consensus 4 ~k~vifD~DGTL~~~~ 19 (238)
.+.+++|+||||+.+.
T Consensus 2 k~~lvldld~tl~~~~ 17 (148)
T smart00577 2 KKTLVLDLDETLVHST 17 (148)
T ss_pred CcEEEEeCCCCeECCC
Confidence 4679999999999964
No 222
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=81.26 E-value=5.8 Score=37.20 Aligned_cols=65 Identities=17% Similarity=0.132 Sum_probs=43.4
Q ss_pred HHHHHHHHhcCcccccceeeecc--cCCCCCCCCCchHHHHHHHHhcCCCCCeE-EEEeCCcc-chhHHHh
Q 035566 114 IHVAKVLRKLGLEDCFDGIVNFE--SLNPTNKTTGQELQLISMLRMVAHHFFQR-LFFDDSTR-NIECGKS 180 (238)
Q Consensus 114 ~~~~~~l~~~~~~~~f~~i~~~~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-v~vgD~~~-di~~a~~ 180 (238)
..+...|+..++. ...+++.. .....+....+..++..+..++|++.+++ |++||+-| |++....
T Consensus 924 ~elr~~Lr~~gLr--~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~ 992 (1050)
T TIGR02468 924 KELRKLLRIQGLR--CHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLG 992 (1050)
T ss_pred HHHHHHHHhCCCc--eEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhC
Confidence 5666777776765 34444443 24444444445666666689999999999 55999999 9776643
No 223
>PRK10444 UMP phosphatase; Provisional
Probab=80.09 E-value=11 Score=29.07 Aligned_cols=102 Identities=12% Similarity=0.013 Sum_probs=49.7
Q ss_pred ChhHHHHHhcCCC---CeEEEecCChHH---HHHHHHhcCcccccceeeecccC-----CC--CC-CCCCchHHHHHHHH
Q 035566 91 DPVLRNLLLSLPI---RKVIFSNADEIH---VAKVLRKLGLEDCFDGIVNFESL-----NP--TN-KTTGQELQLISMLR 156 (238)
Q Consensus 91 ~~~~~~~l~~l~~---~~~i~t~~~~~~---~~~~l~~~~~~~~f~~i~~~~~~-----~~--~k-~~~~~~~~~~~~~~ 156 (238)
+|++.++++.|+. +.+++||+.... ....++.+|+.---+.++++... .. .+ .-.--...+.+.++
T Consensus 19 ~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~~~l~ 98 (248)
T PRK10444 19 VPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVIGEGALIHELY 98 (248)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHHHHHH
Confidence 4666677666653 357889876543 34445566765333445444210 00 00 00001244555555
Q ss_pred hcCCC----CCeEEEEeCCcc-chhHHH------hcCCeEEEecCCC
Q 035566 157 MVAHH----FFQRLFFDDSTR-NIECGK------SIGLHTVLVGTSR 192 (238)
Q Consensus 157 ~~~~~----~~~~v~vgD~~~-di~~a~------~~G~~~i~v~~~~ 192 (238)
..|+. ..+.|++|...+ +..... ..|...+..+.+.
T Consensus 99 ~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n~D~ 145 (248)
T PRK10444 99 KAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDT 145 (248)
T ss_pred HCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 55543 235777886543 222211 2377666655443
No 224
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=77.84 E-value=1.2 Score=26.00 Aligned_cols=28 Identities=14% Similarity=0.216 Sum_probs=17.6
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccchhHHH
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGK 179 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~ 179 (238)
--.+.++++++|+ .+++||...|+++..
T Consensus 4 lyDVqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 4 LYDVQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 4457778899998 799999999988765
No 225
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=77.75 E-value=2.6 Score=32.16 Aligned_cols=59 Identities=14% Similarity=0.199 Sum_probs=27.1
Q ss_pred CchHHHHHHHHhcCCC---CCeEEEEeCCccchhHHHhcCCe-----EEEecCCC---CCccccccccCh
Q 035566 146 GQELQLISMLRMVAHH---FFQRLFFDDSTRNIECGKSIGLH-----TVLVGTSR---RTKGADYALENI 204 (238)
Q Consensus 146 ~~~~~~~~~~~~~~~~---~~~~v~vgD~~~di~~a~~~G~~-----~i~v~~~~---~~~~ad~v~~~~ 204 (238)
.|...+..+++.++.. +.-++++||...|-.|.+.+.-. ++.|.... ....|+|.+++.
T Consensus 165 ~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 165 NKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp -HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred ChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 3355666678888765 67899999999998887775432 45665543 355677766653
No 226
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=77.70 E-value=5.2 Score=30.64 Aligned_cols=49 Identities=18% Similarity=0.356 Sum_probs=36.7
Q ss_pred eEEEEeCCccc---hhHHHhcCCeEEEec-CCCCCccccccccChhHHHHHhH
Q 035566 164 QRLFFDDSTRN---IECGKSIGLHTVLVG-TSRRTKGADYALENIHNIREAFP 212 (238)
Q Consensus 164 ~~v~vgD~~~d---i~~a~~~G~~~i~v~-~~~~~~~ad~v~~~~~el~~~l~ 212 (238)
++++|-|...| +.-|+.+|+++|++- +......-|++|+-.++-...+.
T Consensus 158 d~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~dpd~VD~~IP~Ndda~rsi~ 210 (252)
T COG0052 158 DVLFVIDPRKEKIAVKEANKLGIPVVALVDTNCDPDGVDYVIPGNDDAIRSIA 210 (252)
T ss_pred CEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCCCCccCceeecCCChHHHHHH
Confidence 57788887776 777888999999774 44446778999998888555443
No 227
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=77.53 E-value=26 Score=27.14 Aligned_cols=55 Identities=13% Similarity=0.326 Sum_probs=33.6
Q ss_pred HHHhcCCCCCeEEEEeCCc------cchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHh
Q 035566 154 MLRMVAHHFFQRLFFDDST------RNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPEL 214 (238)
Q Consensus 154 ~~~~~~~~~~~~v~vgD~~------~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~ 214 (238)
+++.++++ +++-=||= .-+.+|+..|++.+++.++...+.. ..++.++.+.+.++
T Consensus 191 ll~q~~id---~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp~~~~~~---~~~v~~~~~~l~~~ 251 (257)
T COG2099 191 LLEQYRID---VVVTKNSGGAGGTYEKIEAARELGIPVIMIERPIDYPAG---FGDVTDLDAALAQL 251 (257)
T ss_pred HHHHhCCC---EEEEccCCcccCcHHHHHHHHHcCCcEEEEecCCcCCcc---cchhhHHHHHHHHH
Confidence 46777774 34433332 3399999999999999887222333 34555555554443
No 228
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=77.41 E-value=1.9 Score=40.56 Aligned_cols=49 Identities=10% Similarity=0.122 Sum_probs=34.6
Q ss_pred CCCeEEEEeCCccchhHHHhcCCeEEEecCCCC---CccccccccChhHHHHH
Q 035566 161 HFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR---TKGADYALENIHNIREA 210 (238)
Q Consensus 161 ~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~---~~~ad~v~~~~~el~~~ 210 (238)
.+..+++|||+.||+.|++.+.+ .|++...+. ...+|+-+..+.=|..+
T Consensus 793 ~~~~TLAIGDGANDVsMIQ~AhV-GVGIsG~EGmQAvmsSD~AIaqFrfL~rL 844 (1151)
T KOG0206|consen 793 LKAVTLAIGDGANDVSMIQEAHV-GVGISGQEGMQAVMSSDFAIAQFRFLERL 844 (1151)
T ss_pred CCceEEEeeCCCccchheeeCCc-CeeeccchhhhhhhcccchHHHHHHHhhh
Confidence 44579999999999999998876 455544332 44567777666655553
No 229
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=77.36 E-value=7.5 Score=31.85 Aligned_cols=46 Identities=9% Similarity=0.130 Sum_probs=32.1
Q ss_pred CchHHHHHHHHhc----CCCCCeEEEEeCCc-----cchhHHHhcCCeEEEecCCCC
Q 035566 146 GQELQLISMLRMV----AHHFFQRLFFDDST-----RNIECGKSIGLHTVLVGTSRR 193 (238)
Q Consensus 146 ~~~~~~~~~~~~~----~~~~~~~v~vgD~~-----~di~~a~~~G~~~i~v~~~~~ 193 (238)
.+..++...-+.+ ++.+++|+.|||.- ||. .||.++ .++|+.++.+
T Consensus 349 dKs~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDf-kaR~a~-~t~WIasP~E 403 (408)
T PF06437_consen 349 DKSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDF-KARLAC-TTAWIASPQE 403 (408)
T ss_pred CcHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcch-hhhhhc-eeeEecCHHH
Confidence 3466665545555 79999999999975 444 456666 4788877653
No 230
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=76.91 E-value=8.4 Score=30.77 Aligned_cols=81 Identities=12% Similarity=0.108 Sum_probs=53.4
Q ss_pred hHHHHHH-HHhcCCCCCeEEEEeCCccc-hhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhhhccccccccc
Q 035566 148 ELQLISM-LRMVAHHFFQRLFFDDSTRN-IECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADEISKNIK 225 (238)
Q Consensus 148 ~~~~~~~-~~~~~~~~~~~v~vgD~~~d-i~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~~~~~~~~~~ 225 (238)
...+.++ ++.+|++.. -+.|-|+..+ ..++...|.+++.=.--...-+-..++++.+++.+.....-+.....
T Consensus 114 RegiRrlAAeeLglpTs-~Y~fa~s~~e~~~a~~~iGfPcvvKPvMSSSGkGqsvv~~~e~ve~AW~~A~~g~R~~---- 188 (394)
T COG0027 114 REGIRRLAAEELGLPTS-KYRFADSLEELRAAVEKIGFPCVVKPVMSSSGKGQSVVRSPEDVEKAWEYAQQGGRGG---- 188 (394)
T ss_pred HHHHHHHHHHHhCCCCc-cccccccHHHHHHHHHHcCCCeecccccccCCCCceeecCHHHHHHHHHHHHhcCCCC----
Confidence 6667776 799999755 4667788888 77788899987743222223355678899999987665433322222
Q ss_pred ccccccccc
Q 035566 226 CSENVAIET 234 (238)
Q Consensus 226 ~~~~~~~~~ 234 (238)
+.++++|-
T Consensus 189 -~~RVIVE~ 196 (394)
T COG0027 189 -SGRVIVEE 196 (394)
T ss_pred -CCcEEEEE
Confidence 55666664
No 231
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=76.50 E-value=1.6 Score=31.18 Aligned_cols=16 Identities=31% Similarity=0.708 Sum_probs=13.5
Q ss_pred eEEEEecCCceeeCcc
Q 035566 5 ECLLFDVDDTLYSHSY 20 (238)
Q Consensus 5 k~vifD~DGTL~~~~~ 20 (238)
+.+++|+|+||+.+..
T Consensus 2 ~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 2 KTLVLDLDETLVHSTF 17 (162)
T ss_pred cEEEEcCCCCcCCCCC
Confidence 5799999999998643
No 232
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=76.06 E-value=2.1 Score=33.97 Aligned_cols=61 Identities=13% Similarity=0.192 Sum_probs=38.0
Q ss_pred CCCeEEEEeCCc-cchhHHH---------------hcCCeEEEecCCC------C---CccccccccChh-HHHHHhHHh
Q 035566 161 HFFQRLFFDDST-RNIECGK---------------SIGLHTVLVGTSR------R---TKGADYALENIH-NIREAFPEL 214 (238)
Q Consensus 161 ~~~~~v~vgD~~-~di~~a~---------------~~G~~~i~v~~~~------~---~~~ad~v~~~~~-el~~~l~~~ 214 (238)
+++...+|||.+ .|+..|. .-||.+|+|.+|- + .-..|.+.+... |...++.++
T Consensus 296 ~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~~~g~~~~~s~~~~Dl~~~~~~~ea~~vv~d~ 375 (389)
T KOG1618|consen 296 PIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVYNGGGGEPPSAGHRDLVKEPVLMEASHVVNDV 375 (389)
T ss_pred CcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeeeecCCCCCCccccchhhhccceechhhhhHHHH
Confidence 558899999996 5688885 6688889885542 1 112244444433 555566666
Q ss_pred hhccccc
Q 035566 215 WDADEIS 221 (238)
Q Consensus 215 ~~~~~~~ 221 (238)
.++.+..
T Consensus 376 ~~Av~~v 382 (389)
T KOG1618|consen 376 NEAVQLV 382 (389)
T ss_pred HHHHHHH
Confidence 6655544
No 233
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.88 E-value=18 Score=28.03 Aligned_cols=91 Identities=13% Similarity=0.086 Sum_probs=48.1
Q ss_pred ChhHHHHHhcCC---CCeEEEecCChHHHHHHHHhcCcccccceeee----cccCC----CCCCCC----CchHHHHHHH
Q 035566 91 DPVLRNLLLSLP---IRKVIFSNADEIHVAKVLRKLGLEDCFDGIVN----FESLN----PTNKTT----GQELQLISML 155 (238)
Q Consensus 91 ~~~~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~----~~~~~----~~k~~~----~~~~~~~~~~ 155 (238)
..|..+++..|. .+..|+|.+--..++.++++......+-.+++ ....+ ..+|.. +....+....
T Consensus 140 Reg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~~s 219 (298)
T KOG3128|consen 140 REGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQNES 219 (298)
T ss_pred HHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHHhhh
Confidence 355666655554 55789999887777777665432221111111 11111 111100 1122222223
Q ss_pred HhcCC--CCCeEEEEeCCccchhHHHhc
Q 035566 156 RMVAH--HFFQRLFFDDSTRNIECGKSI 181 (238)
Q Consensus 156 ~~~~~--~~~~~v~vgD~~~di~~a~~~ 181 (238)
+.+.. +..++++-||+.-|+.||..+
T Consensus 220 ~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 220 EYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HHHhhccCCceEEEeccccccchhhcCC
Confidence 44432 557899999999999998765
No 234
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=73.42 E-value=2.6 Score=29.96 Aligned_cols=18 Identities=33% Similarity=0.401 Sum_probs=14.8
Q ss_pred ceeEEEEecCCceeeCcc
Q 035566 3 KYECLLFDVDDTLYSHSY 20 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~ 20 (238)
+...+++|+|.||+.+..
T Consensus 5 ~kl~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTTK 22 (156)
T ss_pred CceEEEEeCCCCcccccc
Confidence 456899999999999643
No 235
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=72.71 E-value=3.5 Score=31.46 Aligned_cols=13 Identities=31% Similarity=0.286 Sum_probs=7.9
Q ss_pred EEecCCceeeCcc
Q 035566 8 LFDVDDTLYSHSY 20 (238)
Q Consensus 8 ifD~DGTL~~~~~ 20 (238)
+||+||||.+...
T Consensus 1 ~lDyDGTL~p~~~ 13 (235)
T PF02358_consen 1 FLDYDGTLAPIVD 13 (235)
T ss_dssp EEE-TTTSS---S
T ss_pred CcccCCccCCCCC
Confidence 6999999998543
No 236
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=71.32 E-value=7.8 Score=30.12 Aligned_cols=57 Identities=11% Similarity=0.259 Sum_probs=41.5
Q ss_pred HHHhcCCCCCeEEEEeCC------ccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHh
Q 035566 154 MLRMVAHHFFQRLFFDDS------TRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPEL 214 (238)
Q Consensus 154 ~~~~~~~~~~~~v~vgD~------~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~ 214 (238)
+++.++++ +++-=|| ..=+++|+..|++.+++.++.. +.+..++.+++|+.+.+.++
T Consensus 192 l~~~~~i~---~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~-~~~~~~~~~~~el~~~l~~~ 254 (256)
T TIGR00715 192 LLREYRID---AVVTKASGEQGGELEKVKAAEALGINVIRIARPQT-IPGVAIFDDISQLNQFVARL 254 (256)
T ss_pred HHHHcCCC---EEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCC-CCCCccCCCHHHHHHHHHHh
Confidence 46778774 4443333 3339999999999999998863 44456779999999888764
No 237
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=67.56 E-value=3.9 Score=33.43 Aligned_cols=17 Identities=29% Similarity=0.460 Sum_probs=14.5
Q ss_pred eeEEEEecCCceeeCcc
Q 035566 4 YECLLFDVDDTLYSHSY 20 (238)
Q Consensus 4 ~k~vifD~DGTL~~~~~ 20 (238)
-|.+.||+||||+++..
T Consensus 75 ~K~i~FD~dgtlI~t~s 91 (422)
T KOG2134|consen 75 SKIIMFDYDGTLIDTKS 91 (422)
T ss_pred cceEEEecCCceeecCC
Confidence 47899999999999654
No 238
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=67.43 E-value=12 Score=29.02 Aligned_cols=58 Identities=17% Similarity=0.289 Sum_probs=41.2
Q ss_pred HHHhcCCCCCeEEEE---eCC-ccc-hhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhh
Q 035566 154 MLRMVAHHFFQRLFF---DDS-TRN-IECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELW 215 (238)
Q Consensus 154 ~~~~~~~~~~~~v~v---gD~-~~d-i~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~ 215 (238)
+++.++++ +++- |.+ ... +.+|+.+|++.+.+.++.. +....++.+++|+.+.+.+.+
T Consensus 185 L~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~-~~~~~~~~~~~e~~~~l~~~~ 247 (248)
T PRK08057 185 LLRQHRID---VVVTKNSGGAGTEAKLEAARELGIPVVMIARPAL-PYADREFEDVAELVAWLRHLL 247 (248)
T ss_pred HHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCC-CCCCcccCCHHHHHHHHHHhh
Confidence 47888884 3443 332 222 9999999999999998863 233356789999998887654
No 239
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=67.12 E-value=5.4 Score=28.15 Aligned_cols=33 Identities=12% Similarity=0.095 Sum_probs=28.6
Q ss_pred CCCCeEEEEeCCc-cchhHHHhcCCeEEEecCCC
Q 035566 160 HHFFQRLFFDDST-RNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 160 ~~~~~~v~vgD~~-~di~~a~~~G~~~i~v~~~~ 192 (238)
..+++++||||.. .||-+|...|--++|...+-
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv 170 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGV 170 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEecccc
Confidence 5789999999996 67999999999888887764
No 240
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=66.55 E-value=15 Score=32.52 Aligned_cols=84 Identities=13% Similarity=0.121 Sum_probs=55.2
Q ss_pred CCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCcc-ccc-ceeeecccCCCCCCCCCchHHHHHHHHhcC-CCC
Q 035566 88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGLE-DCF-DGIVNFESLNPTNKTTGQELQLISMLRMVA-HHF 162 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~-~~f-~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~ 162 (238)
++..|++.++|+.+... .+|.|-+.+.++..+.+.+.-. .+| +.|++.+.....|- .. +..++ ..+
T Consensus 200 vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde~~~~kt--------~d-L~~~~p~g~ 270 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDESPFFKT--------LD-LVLLFPCGD 270 (635)
T ss_pred EEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHHhCCCCccccceEEEecCCCcccc--------cc-cccCCCCCC
Confidence 46689999999998754 6899999999999999987544 355 56777776433321 11 11222 133
Q ss_pred CeEEEEeCCccchhHHHh
Q 035566 163 FQRLFFDDSTRNIECGKS 180 (238)
Q Consensus 163 ~~~v~vgD~~~di~~a~~ 180 (238)
..++.|+|+.+--.....
T Consensus 271 smvvIIDDr~dVW~~~~~ 288 (635)
T KOG0323|consen 271 SMVVIIDDRSDVWPDHKR 288 (635)
T ss_pred ccEEEEeCccccccCCCc
Confidence 347888888655555443
No 241
>PF02222 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 The ATP-grasp domain has an unusual nucleotide-binding fold, also referred to as palmate, and is found in a superfamily of enzymes including D-alanine-D-alanine ligase, glutathione synthetase, biotin carboxylase, and carbamoyl phosphate synthetase, the ribosomal protein S6 modification enzyme (RimK), urea amidolyase, tubulin-tyrosine ligase, and three enzymes of purine biosynthesis. This family does not contain all known ATP-grasp domain members. All the enzymes of this family possess ATP-dependent carboxylate-amine ligase activity, and their catalytic mechanisms are likely to include acylphosphate intermediates.; PDB: 3K5H_C 3K5I_C 3AX6_A 3Q2O_B 3QFF_B 3R5H_A 3ORQ_B 3ORR_B 4E4T_B 2Z04_A ....
Probab=63.19 E-value=13 Score=26.93 Aligned_cols=77 Identities=17% Similarity=0.133 Sum_probs=44.1
Q ss_pred HhcCCCCCeEEEEeCCccc-hhHHHhcCCeEEEecCCC-CCccccccccChhHHHHHhHHhhhccccccccccccccccc
Q 035566 156 RMVAHHFFQRLFFDDSTRN-IECGKSIGLHTVLVGTSR-RTKGADYALENIHNIREAFPELWDADEISKNIKCSENVAIE 233 (238)
Q Consensus 156 ~~~~~~~~~~v~vgD~~~d-i~~a~~~G~~~i~v~~~~-~~~~ad~v~~~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~ 233 (238)
+.+|++.-....+. +..| ..++...|.++++=.... -.-+-.+++.+-+++.+.+..+ ....-..+.+-++.-|
T Consensus 2 ~~~gip~~~~~~i~-~~~~l~~a~~~iG~P~vlK~~~~GYDGkGq~~i~~~~dl~~a~~~~---~~~~~ilE~~v~f~~E 77 (172)
T PF02222_consen 2 DELGIPTAPYATID-SLEDLEEAAESIGFPAVLKTRRGGYDGKGQFVIRSEEDLEKAWQEL---GGGPCILEEFVPFDRE 77 (172)
T ss_dssp HHTT--B-EEEEES-SHHHHHHHHHHHTSSEEEEESSSSCTTTTEEEESSGGGHHHHHHHT---TTSCEEEEE---ESEE
T ss_pred cccCCCCCCeEEEC-CHHHHHHHHHHcCCCEEEEccCcCcCCCccEEECCHHHHHHHHHhc---CCCcEEEEeccCCcEE
Confidence 56777666555554 4457 566677899998763332 2344567889999998877665 2222233344555555
Q ss_pred cCc
Q 035566 234 TPV 236 (238)
Q Consensus 234 ~~~ 236 (238)
.||
T Consensus 78 iSv 80 (172)
T PF02222_consen 78 ISV 80 (172)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 242
>PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ....
Probab=62.77 E-value=31 Score=25.57 Aligned_cols=69 Identities=12% Similarity=0.103 Sum_probs=46.7
Q ss_pred HHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEe-cCCCCCccccccccChhHHHHHhHHhhhccc
Q 035566 151 LISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLV-GTSRRTKGADYALENIHNIREAFPELWDADE 219 (238)
Q Consensus 151 ~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v-~~~~~~~~ad~v~~~~~el~~~l~~~~~~~~ 219 (238)
..++++++|++......|.|-..-+...+..+.+.+.+ ..+-..-+--.|+.+.+|..+.+.+++....
T Consensus 6 aK~fm~~~~IPTa~~~~f~~~~~A~~~l~~~~~p~~ViKadGla~GKGV~i~~~~~eA~~~l~~~~~~~~ 75 (194)
T PF01071_consen 6 AKEFMKRYGIPTAKYKVFTDYEEALEYLEEQGYPYVVIKADGLAAGKGVVIADDREEALEALREIFVDRK 75 (194)
T ss_dssp HHHHHHHTT-SB--EEEESSHHHHHHHHHHHSSSEEEEEESSSCTTTSEEEESSHHHHHHHHHHHHTSST
T ss_pred HHHHHHHcCCCCCCeeEECCHHHHHHHHHhcCCCceEEccCCCCCCCEEEEeCCHHHHHHHHHHhccccc
Confidence 34578999998888888887555577788888877344 3333333344677899999999999997443
No 243
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=62.68 E-value=4.6 Score=37.41 Aligned_cols=15 Identities=20% Similarity=0.270 Sum_probs=12.9
Q ss_pred eeEEEEecCCceeeC
Q 035566 4 YECLLFDVDDTLYSH 18 (238)
Q Consensus 4 ~k~vifD~DGTL~~~ 18 (238)
-++++||+||||++.
T Consensus 591 ~RLlfLDyDGTLap~ 605 (934)
T PLN03064 591 NRLLILGFNATLTEP 605 (934)
T ss_pred ceEEEEecCceeccC
Confidence 468999999999983
No 244
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=62.65 E-value=29 Score=27.94 Aligned_cols=79 Identities=14% Similarity=0.054 Sum_probs=43.6
Q ss_pred CCCChhHHHHHhcCCC----CeEEEecCChHHHHHHHHhcCc-------------ccccceeeecccCCCCCCCCCchHH
Q 035566 88 LKPDPVLRNLLLSLPI----RKVIFSNADEIHVAKVLRKLGL-------------EDCFDGIVNFESLNPTNKTTGQELQ 150 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~----~~~i~t~~~~~~~~~~l~~~~~-------------~~~f~~i~~~~~~~~~k~~~~~~~~ 150 (238)
-.++||+..+.+.+.. ..+.+||++......+-+.++- ...++.++.+.... +...
T Consensus 195 r~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~r-------K~~~ 267 (373)
T COG4850 195 RQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAAR-------KGQS 267 (373)
T ss_pred cCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhhh-------cccH
Confidence 4678999988877743 3678999887655443333321 12233333322111 1222
Q ss_pred HHHHHHhcCCCCCeEEEEeCC-ccch
Q 035566 151 LISMLRMVAHHFFQRLFFDDS-TRNI 175 (238)
Q Consensus 151 ~~~~~~~~~~~~~~~v~vgD~-~~di 175 (238)
+..+++.+ +-...+.|||+ ..|.
T Consensus 268 l~nil~~~--p~~kfvLVGDsGE~Dp 291 (373)
T COG4850 268 LRNILRRY--PDRKFVLVGDSGEHDP 291 (373)
T ss_pred HHHHHHhC--CCceEEEecCCCCcCH
Confidence 22244444 44678999987 7773
No 245
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=62.06 E-value=4.7 Score=36.90 Aligned_cols=72 Identities=8% Similarity=0.000 Sum_probs=47.1
Q ss_pred CchHHHHHHHHhc------CCCCCeEEEEeCCc-cchhHHHhcCCe------------------------------EEEe
Q 035566 146 GQELQLISMLRMV------AHHFFQRLFFDDST-RNIECGKSIGLH------------------------------TVLV 188 (238)
Q Consensus 146 ~~~~~~~~~~~~~------~~~~~~~v~vgD~~-~di~~a~~~G~~------------------------------~i~v 188 (238)
.|...+..+++.+ +.+++=++.+||.. .|=.|.+..+-. .+.+
T Consensus 678 nKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 757 (797)
T PLN03063 678 TKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSC 757 (797)
T ss_pred ChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEE
Confidence 4566666677655 33567788999964 365665544321 1222
Q ss_pred cCCCCCccccccccChhHHHHHhHHhhhc
Q 035566 189 GTSRRTKGADYALENIHNIREAFPELWDA 217 (238)
Q Consensus 189 ~~~~~~~~ad~v~~~~~el~~~l~~~~~~ 217 (238)
.-|.....|.|.+++..|+.++|..+-+.
T Consensus 758 ~VG~~~s~A~y~l~~~~eV~~lL~~l~~~ 786 (797)
T PLN03063 758 AIGQARTKARYVLDSSNDVVSLLHKLAVA 786 (797)
T ss_pred EECCCCccCeecCCCHHHHHHHHHHHhcc
Confidence 23344678999999999999988876654
No 246
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.90 E-value=8.5 Score=22.62 Aligned_cols=29 Identities=14% Similarity=0.203 Sum_probs=23.2
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHh
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKS 180 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~ 180 (238)
-..+.++++++|+ ++++||...||++.+.
T Consensus 4 fYDVqQlLK~~G~----ivyfg~r~~~iemm~~ 32 (68)
T COG4483 4 FYDVQQLLKKFGI----IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHHHCCe----eeecCCHHHHHHHHHH
Confidence 3456677899998 7999999999988764
No 247
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=59.64 E-value=16 Score=28.22 Aligned_cols=55 Identities=16% Similarity=0.285 Sum_probs=38.7
Q ss_pred HHHhcCCCCCeEEEE---eCC-ccc-hhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhH
Q 035566 154 MLRMVAHHFFQRLFF---DDS-TRN-IECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFP 212 (238)
Q Consensus 154 ~~~~~~~~~~~~v~v---gD~-~~d-i~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~ 212 (238)
+++.++++ +++- |.+ ... +.+|+..|++.+++.++... ....++.+++|+.+.+.
T Consensus 189 l~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~-~~~~~~~~~~e~l~~l~ 248 (249)
T PF02571_consen 189 LFRQYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEP-YGDPVVETIEELLDWLE 248 (249)
T ss_pred HHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCC-CCCcccCCHHHHHHHHh
Confidence 47888874 4443 333 222 99999999999999887633 34444789999888764
No 248
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=58.88 E-value=16 Score=25.84 Aligned_cols=30 Identities=13% Similarity=0.172 Sum_probs=21.7
Q ss_pred ceeEEEEecCCceeeCc-cchhhHHHHHHHH
Q 035566 3 KYECLLFDVDDTLYSHS-YGFSNKCSKNIEE 32 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~-~~~~~~~~~~~~~ 32 (238)
.+|+++||-|++|.-.. ..+++...+.+++
T Consensus 42 ~ikavVlDKDNcit~P~~~~Iwp~~l~~ie~ 72 (190)
T KOG2961|consen 42 GIKAVVLDKDNCITAPYSLAIWPPLLPSIER 72 (190)
T ss_pred CceEEEEcCCCeeeCCcccccCchhHHHHHH
Confidence 47999999999997643 4566666655554
No 249
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=58.75 E-value=7.8 Score=30.08 Aligned_cols=46 Identities=15% Similarity=0.147 Sum_probs=28.1
Q ss_pred CChhHHHHHhcCCCC---eEEEecCChH---HHHHHHHhcCcccccceeeec
Q 035566 90 PDPVLRNLLLSLPIR---KVIFSNADEI---HVAKVLRKLGLEDCFDGIVNF 135 (238)
Q Consensus 90 ~~~~~~~~l~~l~~~---~~i~t~~~~~---~~~~~l~~~~~~~~f~~i~~~ 135 (238)
++|++.++++.++.+ .+++||++.. .....++.+|++---+.++++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcH
Confidence 346677777776544 5688886544 455667777876333445543
No 250
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=56.16 E-value=14 Score=33.66 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=28.8
Q ss_pred HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 155 LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 155 ~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
++++|. -++|-||+.||+-+.+.+.....+.++..
T Consensus 802 lK~~Gy---~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 802 LKKLGY---VTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred HHhcCe---EEEEecCCCcchhhhhhcccceehhcCCh
Confidence 355554 58999999999999999998888877765
No 251
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=55.88 E-value=45 Score=22.88 Aligned_cols=86 Identities=13% Similarity=0.011 Sum_probs=47.8
Q ss_pred CCChhHHHHHhcCCCC---eEEEecCC-hHHHHHHHHhcCcccccceeeecccCCCCC-CCCCchHHHHHHHHhcCCCCC
Q 035566 89 KPDPVLRNLLLSLPIR---KVIFSNAD-EIHVAKVLRKLGLEDCFDGIVNFESLNPTN-KTTGQELQLISMLRMVAHHFF 163 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~---~~i~t~~~-~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k-~~~~~~~~~~~~~~~~~~~~~ 163 (238)
..|++.+..|..|+.. .+++|++. .+.+.+.|+.+.+..-+..-.+.+.+.... ..+.+-.++.++-+..|..-+
T Consensus 44 ~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~~k 123 (144)
T KOG4549|consen 44 IFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSIEK 123 (144)
T ss_pred eeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCcccchhHHHHhhccCcchh
Confidence 4455566666666554 56777764 456677787776553222111111111100 111234555566677888888
Q ss_pred eEEEEeCCccc
Q 035566 164 QRLFFDDSTRN 174 (238)
Q Consensus 164 ~~v~vgD~~~d 174 (238)
+..++.|-..+
T Consensus 124 ~~~~fdDesrn 134 (144)
T KOG4549|consen 124 NKQVFDDESRN 134 (144)
T ss_pred ceeeecccccC
Confidence 89999998766
No 252
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=54.19 E-value=63 Score=29.86 Aligned_cols=15 Identities=20% Similarity=0.169 Sum_probs=13.0
Q ss_pred eeEEEEecCCceeeC
Q 035566 4 YECLLFDVDDTLYSH 18 (238)
Q Consensus 4 ~k~vifD~DGTL~~~ 18 (238)
-++++||+||||++.
T Consensus 507 ~rll~LDyDGTL~~~ 521 (797)
T PLN03063 507 NRLLILGFYGTLTEP 521 (797)
T ss_pred CeEEEEecCccccCC
Confidence 468999999999974
No 253
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=54.02 E-value=20 Score=28.81 Aligned_cols=21 Identities=19% Similarity=0.354 Sum_probs=16.5
Q ss_pred EEEEecCCceeeCccchhhHH
Q 035566 6 CLLFDVDDTLYSHSYGFSNKC 26 (238)
Q Consensus 6 ~vifD~DGTL~~~~~~~~~~~ 26 (238)
+++||+||+|+.....+..+.
T Consensus 37 gfafDIDGVL~RG~~~i~~~~ 57 (389)
T KOG1618|consen 37 GFAFDIDGVLFRGHRPIPGAL 57 (389)
T ss_pred eEEEecccEEEecCCCCcchH
Confidence 799999999999766655443
No 254
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=53.90 E-value=9.9 Score=23.21 Aligned_cols=14 Identities=21% Similarity=0.385 Sum_probs=11.8
Q ss_pred eEEEEecCCceeeC
Q 035566 5 ECLLFDVDDTLYSH 18 (238)
Q Consensus 5 k~vifD~DGTL~~~ 18 (238)
-.++++-|||.+++
T Consensus 39 ~~l~L~eDGT~Vdd 52 (74)
T smart00266 39 VTLVLEEDGTIVDD 52 (74)
T ss_pred cEEEEecCCcEEcc
Confidence 35889999999984
No 255
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=53.79 E-value=8.3 Score=30.01 Aligned_cols=93 Identities=13% Similarity=0.193 Sum_probs=57.4
Q ss_pred CCCChhHHHHHhcCCCC--eEEEecCChHHHHHHHHhcCc-ccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCe
Q 035566 88 LKPDPVLRNLLLSLPIR--KVIFSNADEIHVAKVLRKLGL-EDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQ 164 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~-~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 164 (238)
+...|++.++|+...+. .++.|.+-..+..+++..+.- ...+...+..+....... ....-+..+|-+..+
T Consensus 130 V~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g------~yvKdls~~~~dL~~ 203 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLKDG------NYVKDLSVLGRDLSK 203 (262)
T ss_pred EEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeECC------cEEEEcceeccCccc
Confidence 34568899999887643 678888888899899888764 333333332221111100 000001456668889
Q ss_pred EEEEeCCccchhHHHhcCCeEE
Q 035566 165 RLFFDDSTRNIECGKSIGLHTV 186 (238)
Q Consensus 165 ~v~vgD~~~di~~a~~~G~~~i 186 (238)
++.|+|++.-..+=-..|++.-
T Consensus 204 viIiDNsP~sy~~~p~NgIpI~ 225 (262)
T KOG1605|consen 204 VIIVDNSPQSYRLQPENGIPIK 225 (262)
T ss_pred EEEEcCChHHhccCccCCCccc
Confidence 9999999988766666666543
No 256
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=53.47 E-value=9.6 Score=23.50 Aligned_cols=14 Identities=21% Similarity=0.344 Sum_probs=11.8
Q ss_pred eEEEEecCCceeeC
Q 035566 5 ECLLFDVDDTLYSH 18 (238)
Q Consensus 5 k~vifD~DGTL~~~ 18 (238)
-.++++-|||.+++
T Consensus 41 ~~lvL~eDGT~Vd~ 54 (78)
T cd06539 41 VTLVLEEDGTVVDT 54 (78)
T ss_pred cEEEEeCCCCEEcc
Confidence 35889999999984
No 257
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=52.94 E-value=9.8 Score=23.63 Aligned_cols=14 Identities=21% Similarity=0.254 Sum_probs=12.0
Q ss_pred eEEEEecCCceeeC
Q 035566 5 ECLLFDVDDTLYSH 18 (238)
Q Consensus 5 k~vifD~DGTL~~~ 18 (238)
-.++++-|||.+++
T Consensus 40 ~~lvLeeDGT~Vd~ 53 (81)
T cd06537 40 LTLVLEEDGTAVDS 53 (81)
T ss_pred eEEEEecCCCEEcc
Confidence 36899999999984
No 258
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=52.58 E-value=46 Score=25.08 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=24.4
Q ss_pred CChhHHHHHhcCCCC---eEEEecCCh---HHHHHHHHhcCcc
Q 035566 90 PDPVLRNLLLSLPIR---KVIFSNADE---IHVAKVLRKLGLE 126 (238)
Q Consensus 90 ~~~~~~~~l~~l~~~---~~i~t~~~~---~~~~~~l~~~~~~ 126 (238)
..||..+.++.|+.+ .=.+||... ..+...++++|++
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 458888888888744 236777644 4455666777765
No 259
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=52.14 E-value=71 Score=25.50 Aligned_cols=39 Identities=23% Similarity=0.232 Sum_probs=24.6
Q ss_pred CCCChhHHHHHhcC---CCCeEEEecCChHHHHH---HHHhcCcc
Q 035566 88 LKPDPVLRNLLLSL---PIRKVIFSNADEIHVAK---VLRKLGLE 126 (238)
Q Consensus 88 ~~~~~~~~~~l~~l---~~~~~i~t~~~~~~~~~---~l~~~~~~ 126 (238)
-.+.||+.+.++.| .++.+++||+....-+. ..+.+|+.
T Consensus 37 ~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 37 EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 35667777766655 45578999986554443 34556655
No 260
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=50.55 E-value=39 Score=26.12 Aligned_cols=45 Identities=11% Similarity=0.064 Sum_probs=33.8
Q ss_pred CCCCCchHHHHHH-HHhcCCCC--CeEEEEeCCccc-hhHHHhcCCeEE
Q 035566 142 NKTTGQELQLISM-LRMVAHHF--FQRLFFDDSTRN-IECGKSIGLHTV 186 (238)
Q Consensus 142 k~~~~~~~~~~~~-~~~~~~~~--~~~v~vgD~~~d-i~~a~~~G~~~i 186 (238)
||.+.+--++|.- ++.+|++| .++-||.|.... .-.|...||-+.
T Consensus 81 KPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWEVW 129 (279)
T cd00733 81 KPSPDNIQELYLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWEVW 129 (279)
T ss_pred CCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEEE
Confidence 4444455555554 89999977 689999999777 888999998644
No 261
>PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated
Probab=50.12 E-value=39 Score=26.15 Aligned_cols=45 Identities=11% Similarity=0.047 Sum_probs=33.8
Q ss_pred CCCCCchHHHHHH-HHhcCCCC--CeEEEEeCCccc-hhHHHhcCCeEE
Q 035566 142 NKTTGQELQLISM-LRMVAHHF--FQRLFFDDSTRN-IECGKSIGLHTV 186 (238)
Q Consensus 142 k~~~~~~~~~~~~-~~~~~~~~--~~~v~vgD~~~d-i~~a~~~G~~~i 186 (238)
||.+.+--++|.- ++.+|++| .++-||.|.... .-.|...||-+.
T Consensus 85 KPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEVW 133 (283)
T PRK09348 85 KPSPDNIQELYLGSLEALGIDPLEHDIRFVEDNWESPTLGAWGLGWEVW 133 (283)
T ss_pred cCCCccHHHHHHHHHHHhCCCccccceeEeecCCCCCcccccccceEEE
Confidence 4444455556554 89999987 689999999777 888999998644
No 262
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=49.77 E-value=13 Score=23.04 Aligned_cols=13 Identities=23% Similarity=0.319 Sum_probs=11.4
Q ss_pred EEEEecCCceeeC
Q 035566 6 CLLFDVDDTLYSH 18 (238)
Q Consensus 6 ~vifD~DGTL~~~ 18 (238)
.++++-|||.+++
T Consensus 42 ~lvL~eDGTeVdd 54 (78)
T cd01615 42 TLVLEEDGTEVDD 54 (78)
T ss_pred EEEEeCCCcEEcc
Confidence 5899999999984
No 263
>PF01990 ATP-synt_F: ATP synthase (F/14-kDa) subunit; InterPro: IPR008218 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. The V-ATPases (or V1V0-ATPase) and A-ATPases (or A1A0-ATPase) are each composed of two linked complexes: the V1 or A1 complex contains the catalytic core that hydrolyses/synthesizes ATP, and the V0 or A0 complex that forms the membrane-spanning pore. The V- and A-ATPases both contain rotary motors, one that drives proton translocation across the membrane and one that drives ATP synthesis/hydrolysis [, , ]. The V- and A-ATPases more closely resemble one another in subunit structure than they do the F-ATPases, although the function of A-ATPases is closer to that of F-ATPases. This entry represents subunit F found in the V1 complex of V-ATPases (both eukaryotic and bacterial), as well as in the A1 complex of A-ATPases. Subunit F is a 16 kDa protein that is required for the assembly and activity of V-ATPase, and has a potential role in the differential targeting and regulation of the enzyme for specific organelles. This subunit is not necessary for the rotation of the ATPase V1 rotor, but it does promote catalysis []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0046933 hydrogen ion transporting ATP synthase activity, rotational mechanism, 0046961 proton-transporting ATPase activity, rotational mechanism, 0015991 ATP hydrolysis coupled proton transport, 0033178 proton-transporting two-sector ATPase complex, catalytic domain; PDB: 2D00_E 3A5C_P 3J0J_H 3A5D_H 2OV6_A 2QAI_B 3AON_B 2I4R_A.
Probab=48.21 E-value=39 Score=21.55 Aligned_cols=24 Identities=17% Similarity=0.142 Sum_probs=19.5
Q ss_pred EEEEeCCccchhHHHhcCCeEEEec
Q 035566 165 RLFFDDSTRNIECGKSIGLHTVLVG 189 (238)
Q Consensus 165 ~v~vgD~~~di~~a~~~G~~~i~v~ 189 (238)
+.++||. .-+...+.+|+..+.+.
T Consensus 1 IavIGd~-~~v~gFrLaGv~~~~~~ 24 (95)
T PF01990_consen 1 IAVIGDR-DTVLGFRLAGVEGVYVN 24 (95)
T ss_dssp EEEEE-H-HHHHHHHHTTSEEEEES
T ss_pred CEEEeCH-HHHHHHHHcCCCCccCC
Confidence 4678998 55999999999999887
No 264
>PRK02228 V-type ATP synthase subunit F; Provisional
Probab=48.20 E-value=44 Score=21.73 Aligned_cols=24 Identities=8% Similarity=0.012 Sum_probs=19.3
Q ss_pred eEEEEeCCccchhHHHhcCCeEEEe
Q 035566 164 QRLFFDDSTRNIECGKSIGLHTVLV 188 (238)
Q Consensus 164 ~~v~vgD~~~di~~a~~~G~~~i~v 188 (238)
++.++|| ...+..++.+|+..+.+
T Consensus 2 kIaVIGD-~dtv~GFrLaGi~~~~~ 25 (100)
T PRK02228 2 EIAVIGS-PEFTTGFRLAGIRKVYE 25 (100)
T ss_pred EEEEEeC-HHHHHHHHHcCCceEEe
Confidence 4678999 56699999999986654
No 265
>TIGR00388 glyQ glycyl-tRNA synthetase, tetrameric type, alpha subunit. This tetrameric form of glycyl-tRNA synthetase (2 alpha, 2 beta) is found in the majority of completed eubacterial genomes, with the two genes fused in a few species. A substantially different homodimeric form (not recognized by this model) replaces this form in the Archaea, animals, yeasts, and some eubacteria.
Probab=47.46 E-value=46 Score=25.90 Aligned_cols=45 Identities=16% Similarity=0.104 Sum_probs=33.6
Q ss_pred CCCCCchHHHHHH-HHhcCCCC--CeEEEEeCCccc-hhHHHhcCCeEE
Q 035566 142 NKTTGQELQLISM-LRMVAHHF--FQRLFFDDSTRN-IECGKSIGLHTV 186 (238)
Q Consensus 142 k~~~~~~~~~~~~-~~~~~~~~--~~~v~vgD~~~d-i~~a~~~G~~~i 186 (238)
||.+.+--++|.- ++.+|++| .++-||.|.... .-.|...||-+.
T Consensus 82 KPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEVW 130 (293)
T TIGR00388 82 KPSPDNIQELYLDSLRALGIDPTEHDIRFVEDNWENPTLGAWGLGWEVW 130 (293)
T ss_pred CCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEEE
Confidence 4444445555554 89999987 689999999777 888999998644
No 266
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=47.22 E-value=1.3e+02 Score=22.98 Aligned_cols=46 Identities=28% Similarity=0.292 Sum_probs=25.8
Q ss_pred CChhHHHHHhcCC---CCeEEEecCC---hHHHHHHHHh-cCcccccceeeec
Q 035566 90 PDPVLRNLLLSLP---IRKVIFSNAD---EIHVAKVLRK-LGLEDCFDGIVNF 135 (238)
Q Consensus 90 ~~~~~~~~l~~l~---~~~~i~t~~~---~~~~~~~l~~-~~~~~~f~~i~~~ 135 (238)
++|++.+.++.++ .+..++||+. .......+.. +|+.-..+.++++
T Consensus 15 ~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits 67 (236)
T TIGR01460 15 PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS 67 (236)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH
Confidence 3566777777664 3356888764 2333344444 6765445555544
No 267
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=46.86 E-value=15 Score=22.83 Aligned_cols=14 Identities=21% Similarity=0.287 Sum_probs=11.7
Q ss_pred eEEEEecCCceeeC
Q 035566 5 ECLLFDVDDTLYSH 18 (238)
Q Consensus 5 k~vifD~DGTL~~~ 18 (238)
-.++++-|||.+++
T Consensus 43 ~~lvL~eDGT~Vdd 56 (80)
T cd06536 43 ITLVLAEDGTIVED 56 (80)
T ss_pred eEEEEecCCcEEcc
Confidence 35789999999984
No 268
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=46.64 E-value=61 Score=25.92 Aligned_cols=39 Identities=10% Similarity=0.253 Sum_probs=27.9
Q ss_pred HHHHHHhcC-CCCCeEEEEeCCccc-----hhHHHhcCCeEEEecC
Q 035566 151 LISMLRMVA-HHFFQRLFFDDSTRN-----IECGKSIGLHTVLVGT 190 (238)
Q Consensus 151 ~~~~~~~~~-~~~~~~v~vgD~~~d-----i~~a~~~G~~~i~v~~ 190 (238)
+..+.++.| +....+.++||+ |+ +.++...|+..-.+..
T Consensus 141 l~Ti~E~~g~l~g~k~a~vGDg-NNv~nSl~~~~a~~G~dv~ia~P 185 (310)
T COG0078 141 LMTIKEHFGSLKGLKLAYVGDG-NNVANSLLLAAAKLGMDVRIATP 185 (310)
T ss_pred HHHHHHhcCcccCcEEEEEcCc-chHHHHHHHHHHHhCCeEEEECC
Confidence 444457777 677899999999 55 5677788987655533
No 269
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=45.71 E-value=68 Score=23.19 Aligned_cols=48 Identities=8% Similarity=0.134 Sum_probs=29.8
Q ss_pred HHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhH
Q 035566 155 LRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFP 212 (238)
Q Consensus 155 ~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~ 212 (238)
+...|++ ++||++.. ...|+..|++++.+..+. +-+...+.+-..++.
T Consensus 121 ~~~~G~~----viVGg~~~-~~~A~~~gl~~v~i~sg~-----esi~~Al~eA~~i~~ 168 (176)
T PF06506_consen 121 AKAEGVD----VIVGGGVV-CRLARKLGLPGVLIESGE-----ESIRRALEEALRIAR 168 (176)
T ss_dssp HHHTT------EEEESHHH-HHHHHHTTSEEEESS--H-----HHHHHHHHHHHHHHH
T ss_pred HHHcCCc----EEECCHHH-HHHHHHcCCcEEEEEecH-----HHHHHHHHHHHHHHH
Confidence 4455664 88999964 899999999999987654 223344445444433
No 270
>PF10113 Fibrillarin_2: Fibrillarin-like archaeal protein; InterPro: IPR016760 Members of this protein family are HmdC, whose gene regularly occurs in the context of genes for HmdA (5,10-methenyltetrahydromethanopterin hydrogenase) and the radical SAM protein HmdB involved in biosynthesis of the HmdA cofactor. Bioinformatics suggests this protein, a homologue of eukaryotic fibrillarin, may be involved in biosynthesis of the guanylyl pyridinol cofactor in HmdA.
Probab=45.08 E-value=51 Score=27.59 Aligned_cols=37 Identities=8% Similarity=0.138 Sum_probs=26.3
Q ss_pred HHHHHhcCCCCCeEEEEeCCccchhH----HHhcCCeEEEe
Q 035566 152 ISMLRMVAHHFFQRLFFDDSTRNIEC----GKSIGLHTVLV 188 (238)
Q Consensus 152 ~~~~~~~~~~~~~~v~vgD~~~di~~----a~~~G~~~i~v 188 (238)
.++++++|-..+-+++|||++.|+.. +...|+....+
T Consensus 212 a~~Akk~gkGveaI~~vGDGyddLI~G~~a~id~~vDvfVv 252 (505)
T PF10113_consen 212 AELAKKYGKGVEAIMHVGDGYDDLITGLKACIDMGVDVFVV 252 (505)
T ss_pred HHHHHHhCCCceEEEEecCChHHHHHHHHHHHhcCCcEEEE
Confidence 33568999888999999999999443 33446654444
No 271
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=44.54 E-value=17 Score=22.50 Aligned_cols=13 Identities=31% Similarity=0.327 Sum_probs=11.4
Q ss_pred EEEEecCCceeeC
Q 035566 6 CLLFDVDDTLYSH 18 (238)
Q Consensus 6 ~vifD~DGTL~~~ 18 (238)
.++++-|||.+++
T Consensus 41 ~lvL~eDGT~Vd~ 53 (79)
T cd06538 41 SLVLDEDGTGVDT 53 (79)
T ss_pred EEEEecCCcEEcc
Confidence 5899999999984
No 272
>PF04358 DsrC: DsrC like protein; InterPro: IPR007453 DsrC (P45573 from SWISSPROT) has been observed to co-purify with Desulphovibrio vulgaris dissimilatory sulphite reductase []. However, DsrC appears to be only loosely associated to the sulphite reductase, which suggests that it may not be an integral part of the dissimilatory sulphite reductase. Many proteins in this entry are found in organisms such as Escherichia coli and Haemophilus influenzae which do not contain dissimilatory sulphite reductases but can synthesise assimilatory sirohaem sulphite and nitrite reductases. It is speculated that DsrC may be involved in the assembly, folding or stabilisation of sirohaem proteins []. The strictly conserved cysteine in the C terminus suggests that DsrC may have a catalytic function in the metabolism of sulphur compounds []. Also included in this entry is TusE, a partner to TusBCD in a sulphur relay system for 2-thiouridine biosynthesis, a tRNA base modification process. Many proteins in this entry are annotated as the third (gamma) subunit of dissimilatory sulphite reductase ; PDB: 2V4J_F 2A5W_C 1SAU_A 1JI8_A 1YX3_A.
Probab=43.06 E-value=95 Score=20.64 Aligned_cols=48 Identities=23% Similarity=0.370 Sum_probs=27.0
Q ss_pred eEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhHH----HHHHHHHHHhhc
Q 035566 5 ECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESEV----SEFNRVLYKNYG 57 (238)
Q Consensus 5 k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~ 57 (238)
+.|-+|=||=|++. . .|...+...++++.|+..... -.+.+.+|..++
T Consensus 7 ~~i~~D~eGfL~~~-~----dW~eevA~~lA~~egI~Ltd~HW~vI~flR~~y~~~~ 58 (109)
T PF04358_consen 7 KTIETDEEGFLVDP-E----DWNEEVAEALAKEEGIELTDEHWEVIRFLRDYYQEYG 58 (109)
T ss_dssp EEEEEETTSEESSG-G----G--HHHHHHHHHCTT-S--HHHHHHHHHHHHHHHHHS
T ss_pred EEeeeCCCcCcCCh-H----hCCHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHC
Confidence 57889999999994 3 344444456777788874332 222334555555
No 273
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=42.19 E-value=91 Score=25.37 Aligned_cols=84 Identities=13% Similarity=0.013 Sum_probs=43.8
Q ss_pred eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhc-CCCCCeEEEEeCCccc---hhHHHh
Q 035566 105 KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMV-AHHFFQRLFFDDSTRN---IECGKS 180 (238)
Q Consensus 105 ~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~-~~~~~~~v~vgD~~~d---i~~a~~ 180 (238)
.+++|+........+++.+++...++..+........+. -...+..+.+.+ ...|+=++..||.... ..+|+.
T Consensus 32 ~~~~tg~h~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~ 108 (365)
T TIGR00236 32 YVIVTAQHREMLDQVLDLFHLPPDYDLNIMSPGQTLGEI---TSNMLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFY 108 (365)
T ss_pred EEEEeCCCHHHHHHHHHhcCCCCCeeeecCCCCCCHHHH---HHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHH
Confidence 467888776677777777777632222222110110110 111122222222 1356667778897654 446677
Q ss_pred cCCeEEEecCC
Q 035566 181 IGLHTVLVGTS 191 (238)
Q Consensus 181 ~G~~~i~v~~~ 191 (238)
.|++.+.+..+
T Consensus 109 ~~ipv~h~~~g 119 (365)
T TIGR00236 109 LQIPVGHVEAG 119 (365)
T ss_pred hCCCEEEEeCC
Confidence 89998877544
No 274
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=41.21 E-value=36 Score=26.56 Aligned_cols=36 Identities=28% Similarity=0.376 Sum_probs=25.4
Q ss_pred HHHHHhcCC---CCeEEEecCChHHHHHHHHhcCccccc
Q 035566 94 LRNLLLSLP---IRKVIFSNADEIHVAKVLRKLGLEDCF 129 (238)
Q Consensus 94 ~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~~~~~~f 129 (238)
..+.|+.++ .+.+++|+.+...+...++.+|+..++
T Consensus 26 ~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 26 AKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence 334444443 446789999888889999999887544
No 275
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=41.14 E-value=59 Score=24.20 Aligned_cols=48 Identities=10% Similarity=0.218 Sum_probs=33.4
Q ss_pred eEEEEeCCccc---hhHHHhcCCeEEEecCCC-CCccccccccChhHHHHHh
Q 035566 164 QRLFFDDSTRN---IECGKSIGLHTVLVGTSR-RTKGADYALENIHNIREAF 211 (238)
Q Consensus 164 ~~v~vgD~~~d---i~~a~~~G~~~i~v~~~~-~~~~ad~v~~~~~el~~~l 211 (238)
++++|-|-..| +.-|..+|+++|++.... .....|+.|+-.++=...+
T Consensus 110 dlliv~dp~~~~~Av~EA~~l~IP~Iai~DTn~dp~~vdypIP~Ndds~~Si 161 (196)
T TIGR01012 110 EVVVVTDPRADHQALKEASEVGIPIVALCDTDNPLRYVDLVIPTNNKGRHSL 161 (196)
T ss_pred CEEEEECCccccHHHHHHHHcCCCEEEEeeCCCCCccCCEEECCCCchHHHH
Confidence 46666677666 667778899999874444 4566888888777644433
No 276
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=40.23 E-value=1.1e+02 Score=26.85 Aligned_cols=74 Identities=9% Similarity=0.067 Sum_probs=43.8
Q ss_pred CCeEEEecC-ChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhc
Q 035566 103 IRKVIFSNA-DEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSI 181 (238)
Q Consensus 103 ~~~~i~t~~-~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~ 181 (238)
.+.+++.-. ....+..+.+.++++ ++.+...... .......-++..|++ ++|||... ...|+..
T Consensus 98 ~~ia~vg~~~~~~~~~~~~~ll~~~--i~~~~~~~~~--------e~~~~~~~l~~~G~~----~viG~~~~-~~~A~~~ 162 (526)
T TIGR02329 98 SSIGVVTHQDTPPALRRFQAAFNLD--IVQRSYVTEE--------DARSCVNDLRARGIG----AVVGAGLI-TDLAEQA 162 (526)
T ss_pred CcEEEEecCcccHHHHHHHHHhCCc--eEEEEecCHH--------HHHHHHHHHHHCCCC----EEECChHH-HHHHHHc
Confidence 344455443 334555566666654 3332222210 123333345667774 88999944 8999999
Q ss_pred CCeEEEecCC
Q 035566 182 GLHTVLVGTS 191 (238)
Q Consensus 182 G~~~i~v~~~ 191 (238)
|++.+++..+
T Consensus 163 gl~~ili~s~ 172 (526)
T TIGR02329 163 GLHGVFLYSA 172 (526)
T ss_pred CCceEEEecH
Confidence 9999999765
No 277
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=40.10 E-value=86 Score=23.51 Aligned_cols=46 Identities=11% Similarity=0.161 Sum_probs=32.1
Q ss_pred CCCeEEEEeCCccc---hhHHHhcCCeEEEecCC-CCCccccccccChhHH
Q 035566 161 HFFQRLFFDDSTRN---IECGKSIGLHTVLVGTS-RRTKGADYALENIHNI 207 (238)
Q Consensus 161 ~~~~~v~vgD~~~d---i~~a~~~G~~~i~v~~~-~~~~~ad~v~~~~~el 207 (238)
.| ++++|-|...| +.-|..+|+++|++... ......|+.|+-.++=
T Consensus 114 ~P-dliiv~dp~~~~~AI~EA~kl~IP~IaivDTn~dp~~VdypIP~Ndds 163 (204)
T PRK04020 114 EP-DVVVVTDPRGDAQAVKEAIEVGIPVVALCDTDNLTSNVDLVIPTNNKG 163 (204)
T ss_pred CC-CEEEEECCcccHHHHHHHHHhCCCEEEEEeCCCCcccCceeECCCCch
Confidence 55 46667777666 66777789999987443 3455678888876653
No 278
>PRK01395 V-type ATP synthase subunit F; Provisional
Probab=40.07 E-value=69 Score=21.02 Aligned_cols=29 Identities=17% Similarity=0.159 Sum_probs=22.9
Q ss_pred CeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 163 FQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 163 ~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
..+.++|| ...+..++.+|+..+.+....
T Consensus 4 ~kIaVIGD-~dtv~GFrLaGi~~~~v~~~e 32 (104)
T PRK01395 4 YKIGVVGD-KDSILPFKALGIDVFPVIDEQ 32 (104)
T ss_pred eeEEEEEC-HHHHHHHHHcCCeeEEecChH
Confidence 35789999 566999999999877775554
No 279
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=39.46 E-value=1.7e+02 Score=23.36 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=32.9
Q ss_pred chHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCC
Q 035566 147 QELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~ 192 (238)
+...+++++++.|. + ++.| |+..||....-.|..+|+++.|.
T Consensus 226 Ns~rL~eiA~~~g~-~--aylI-d~~~ei~~~w~~~~~~VGvTAGA 267 (294)
T COG0761 226 NSNRLAEIAKRHGK-P--AYLI-DDAEEIDPEWLKGVKTVGVTAGA 267 (294)
T ss_pred cHHHHHHHHHHhCC-C--eEEe-CChHhCCHHHhcCccEEEEecCC
Confidence 57778888888887 2 4555 55688998888888899998876
No 280
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=39.10 E-value=17 Score=32.00 Aligned_cols=51 Identities=6% Similarity=0.103 Sum_probs=30.0
Q ss_pred EEeCCccchhHHHhcCCeEE--E-ecCCCCCc--cccccccChhHHHHHhHHhhhc
Q 035566 167 FFDDSTRNIECGKSIGLHTV--L-VGTSRRTK--GADYALENIHNIREAFPELWDA 217 (238)
Q Consensus 167 ~vgD~~~di~~a~~~G~~~i--~-v~~~~~~~--~ad~v~~~~~el~~~l~~~~~~ 217 (238)
.||..++|+..=+.+|++.. + ++...+.. ...-...++.-|.+++...|=.
T Consensus 655 gFGNR~TDviSY~~VgVP~~RIFtINpkGEv~~e~~~~~~~SY~~l~elVd~mFPp 710 (738)
T KOG2116|consen 655 GFGNRITDVISYRQVGVPLSRIFTINPKGEVIQELLKTLKSSYVRLNELVDHMFPP 710 (738)
T ss_pred ecCCCcccceeeeeecCCccceEEECCCceehHHHHhhhhhhhhhHHHHHHHhCCC
Confidence 39999999999999998553 3 34333311 1122345555555655555543
No 281
>PF13535 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 3LN7_B 2PN1_A 4DIM_A.
Probab=38.54 E-value=1.3e+02 Score=21.23 Aligned_cols=72 Identities=8% Similarity=0.178 Sum_probs=44.0
Q ss_pred chHHHHHHHHhcCCCCCeEEEEeCCccc-hhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhhhccc
Q 035566 147 QELQLISMLRMVAHHFFQRLFFDDSTRN-IECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDADE 219 (238)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~v~vgD~~~d-i~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~~~~ 219 (238)
.+..+.+++++.|++--++..+.+. ++ ...+...|.+.+.=.........-+++.+.+++.+.+..+.....
T Consensus 4 dK~~~~~~~~~~gv~~P~~~~~~~~-~~~~~~~~~~~~p~vvKp~~g~gs~gv~~~~~~~~l~~~~~~~~~~~~ 76 (184)
T PF13535_consen 4 DKYRMRELLKKAGVPVPKTRIVDSE-EELRAFAEDLGFPFVVKPVDGSGSRGVFIVHSPEELEAALAEIREDSP 76 (184)
T ss_dssp CHHHHHHHHHHHTS----EEEECSH-HHHHHHHHHSSSSEEEEESS-STTTT-EEESSHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHcCcCCCCEEEECCH-HHHHHHHHHcCCCEEEEcCccccCCCEEEeCCHHHHHHHHHHHHHhcc
Confidence 3566777889999865556666554 55 455677787655443333233445678899999999888766554
No 282
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=36.10 E-value=33 Score=20.58 Aligned_cols=22 Identities=14% Similarity=-0.008 Sum_probs=15.0
Q ss_pred HHHHHHHhcCCCCCeEEEEeCC
Q 035566 150 QLISMLRMVAHHFFQRLFFDDS 171 (238)
Q Consensus 150 ~~~~~~~~~~~~~~~~v~vgD~ 171 (238)
++.+.+++.|+.+.++|.|||-
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig~~ 65 (69)
T PF09269_consen 44 GVEKALRKAGAKEGDTVRIGDY 65 (69)
T ss_dssp THHHHHHTTT--TT-EEEETTE
T ss_pred CHHHHHHHcCCCCCCEEEEcCE
Confidence 3555678889999999999985
No 283
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit. In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes.
Probab=35.89 E-value=3.1e+02 Score=26.54 Aligned_cols=69 Identities=12% Similarity=0.033 Sum_probs=44.5
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccc-hhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhhhc
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRN-IECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDA 217 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~d-i~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~~ 217 (238)
+..+.+.++++|++.-....+.+. .+ ...+...|.+.+.=.....-...-.++.+.+||.+.+.+.+..
T Consensus 670 K~~f~~lL~~~GIp~P~~~~v~s~-ee~~~~~~~igyPvIVKP~~~~Gg~gv~iv~~~eeL~~~l~~a~~~ 739 (1050)
T TIGR01369 670 REKFSELLDELGIPQPKWKTATSV-EEAVEFASEIGYPVLVRPSYVLGGRAMEIVYNEEELRRYLEEAVEV 739 (1050)
T ss_pred HHHHHHHHHHCCcCCCCeEEECCH-HHHHHHHHhcCCCEEEEECCCCCCCCeEEECCHHHHHHHHHHHHHh
Confidence 445666789999976666666553 44 5567788987654332221223335778899999988877654
No 284
>PRK13790 phosphoribosylamine--glycine ligase; Provisional
Probab=35.77 E-value=1.4e+02 Score=24.79 Aligned_cols=69 Identities=9% Similarity=0.014 Sum_probs=44.4
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhhh
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWD 216 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~ 216 (238)
+....++++++|++.-....+.|...-...+...|.+.+.=..+.....--.++.+.+|+...+.++++
T Consensus 68 K~~~k~~l~~~gIptp~~~~~~~~~ea~~~~~~~g~PvVvKp~~~~~gkGV~iv~~~~el~~a~~~~~~ 136 (379)
T PRK13790 68 KLFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYG 136 (379)
T ss_pred HHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh
Confidence 444556789999976666666554333555667888766544433222334577899999988888763
No 285
>PRK06524 biotin carboxylase-like protein; Validated
Probab=34.86 E-value=3.1e+02 Score=23.89 Aligned_cols=120 Identities=9% Similarity=0.026 Sum_probs=66.3
Q ss_pred CCChhHHHHHhcCCCC-eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEE
Q 035566 89 KPDPVLRNLLLSLPIR-KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLF 167 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~~-~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~ 167 (238)
-..|.+.++++.-... +++.-.. ...++.+++.+|+.-.......+. ... .+....++++.+|++.-..+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~fl~~-DG~iQ~lLE~lGIpy~gP~a~asa---i~m----DK~~tK~l~~~aGIPtpp~~~ 162 (493)
T PRK06524 91 LRHPETLEFIKRRGPGGKACFVMF-DEETEALARQAGLEVMHPPAELRH---RLD----SKIVTTRLANEAGVPSVPHVL 162 (493)
T ss_pred hcCHHHHHHHHhhCCCCceEEecC-CHHHHHHHHHCCCeEECcCHHHHH---HhC----CHHHHHHHHHHcCCCCCCccc
Confidence 3457888888765433 3433322 366778889988752222211111 111 255566678999986555554
Q ss_pred E-eCCccchh-HHHh--cCCeEEEecCCCCCccccccccChhHHHHHhHHhhh
Q 035566 168 F-DDSTRNIE-CGKS--IGLHTVLVGTSRRTKGADYALENIHNIREAFPELWD 216 (238)
Q Consensus 168 v-gD~~~di~-~a~~--~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~ 216 (238)
+ -++..++. .+.. .|.+.+.=........--.++.+.+|+...+..+++
T Consensus 163 ~~~~~~eel~~~~~~~~IGyPvVVKP~~GGSS~GV~~Vkn~eELe~a~~~~~~ 215 (493)
T PRK06524 163 GRVDSYDELSALAHGAGLGDDLVVQTPYGDSGSTTFFVRGQRDWDKYAGGIVG 215 (493)
T ss_pred ccCCCHHHHHHHHHhccCCCcEEEEECCCCCCcCEEEeCCHHHHHHHHHHhcC
Confidence 3 23333333 3333 788765444433333445577888898887777654
No 286
>COG0752 GlyQ Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]
Probab=34.38 E-value=85 Score=24.24 Aligned_cols=45 Identities=13% Similarity=0.068 Sum_probs=32.9
Q ss_pred CCCCCchHHHHHH-HHhcCCCC--CeEEEEeCCccc-hhHHHhcCCeEE
Q 035566 142 NKTTGQELQLISM-LRMVAHHF--FQRLFFDDSTRN-IECGKSIGLHTV 186 (238)
Q Consensus 142 k~~~~~~~~~~~~-~~~~~~~~--~~~v~vgD~~~d-i~~a~~~G~~~i 186 (238)
||.+.+-.++|.- ++.+|++| .++=||.|...+ --.|...||-+.
T Consensus 86 KPsP~NiQeLYL~SL~~lGid~~~HDIRFVEDnWE~PTlGawGlGWEVW 134 (298)
T COG0752 86 KPSPDNIQELYLGSLEALGIDPLEHDIRFVEDNWENPTLGAWGLGWEVW 134 (298)
T ss_pred cCCCccHHHHHHHHHHHcCCChhhcceeeeccCCCCCcccccccceeEE
Confidence 4444445555554 89999988 689999999877 778888888543
No 287
>cd05796 Ribosomal_P0_like Ribosomal protein L10 family, P0-like protein subfamily; composed of uncharacterized eukaryotic proteins with similarity to the 60S ribosomal protein P0, including the Saccharomyces cerevisiae protein called mRNA turnover protein 4 (MRT4). MRT4 may be involved in mRNA decay. P0 forms a tight complex with multiple copies of the small acidic protein L12(e). This complex forms a stalk structure on the large subunit of the ribosome. It occupies the L7/L12 stalk of the ribosome. The stalk is known to contain the binding site for elongation factors EF-G and EF-Tu; however, there is disagreement as to whether or not P0 is involved in forming the binding site. The stalk is believed to be associated with GTPase activities in protein synthesis. In a neuroblastoma cell line, P0 has been shown to interact with the SH3 domain of Src and to activate the binding of the Nck1 adaptor protein with skeletal proteins such as the Wiskott-Aldrich Syndrome Protein (WASP) and the WAS
Probab=34.22 E-value=1.1e+02 Score=21.98 Aligned_cols=36 Identities=22% Similarity=0.258 Sum_probs=26.6
Q ss_pred hhHHHHHhcCCCC-eEEEecCChHHHHHHHHhcCccc
Q 035566 92 PVLRNLLLSLPIR-KVIFSNADEIHVAKVLRKLGLED 127 (238)
Q Consensus 92 ~~~~~~l~~l~~~-~~i~t~~~~~~~~~~l~~~~~~~ 127 (238)
+++..+...++.. ++++|+.+...+..++..+....
T Consensus 67 ~~~~~L~~~l~G~~~lift~~dp~~v~k~l~~~~~~~ 103 (163)
T cd05796 67 PNLHKLSKYLKGQVGLLFTNEPPEEVIEYFDSYSEPD 103 (163)
T ss_pred ccHHHHHHHhCCCEEEEEECCCHHHHHHHHHHcCCcc
Confidence 4566777778777 56788988888888888765443
No 288
>cd06831 PLPDE_III_ODC_like_AZI Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase-like Antizyme Inhibitor. Antizyme inhibitor (AZI) is homologous to the fold type III PLP-dependent enzyme ODC but does not retain any decarboxylase activity. Like ODC, AZI is presumed to exist as a homodimer. Antizyme is a regulatory protein that binds directly to the ODC monomer to block its active site, leading to its degradation by the 26S proteasome. AZI binds to Antizyme with a higher affinity than ODC, preventing the formation of the Antizyme-ODC complex. Thus, AZI blocks the ability of Antizyme to promote ODC degradation, which leads to increased ODC enzymatic activity and polyamine levels. AZI also prevents the degradation of other proteins regulated by Antizyme, such as cyclin D1.
Probab=34.11 E-value=1.4e+02 Score=24.95 Aligned_cols=15 Identities=20% Similarity=0.379 Sum_probs=7.4
Q ss_pred CCCChhHHHHHhcCC
Q 035566 88 LKPDPVLRNLLLSLP 102 (238)
Q Consensus 88 ~~~~~~~~~~l~~l~ 102 (238)
..+.+.+.+.|..+.
T Consensus 45 aN~~~~il~~l~~~G 59 (394)
T cd06831 45 CNSTPAVLEILAALG 59 (394)
T ss_pred cCCCHHHHHHHHHcC
Confidence 344455555555443
No 289
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=34.02 E-value=23 Score=21.92 Aligned_cols=13 Identities=23% Similarity=0.276 Sum_probs=11.0
Q ss_pred EEEEecCCceeeC
Q 035566 6 CLLFDVDDTLYSH 18 (238)
Q Consensus 6 ~vifD~DGTL~~~ 18 (238)
.++++=|||.+++
T Consensus 42 ~lvL~eDGT~Vdd 54 (78)
T PF02017_consen 42 RLVLEEDGTEVDD 54 (78)
T ss_dssp EEEETTTTCBESS
T ss_pred EEEEeCCCcEEcc
Confidence 4688999999994
No 290
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=33.43 E-value=1.2e+02 Score=23.53 Aligned_cols=48 Identities=13% Similarity=0.093 Sum_probs=33.2
Q ss_pred CCCeEEEEeCCccc---hhHHHhcCCeEEEecC-CCCCccccccccChhHHHH
Q 035566 161 HFFQRLFFDDSTRN---IECGKSIGLHTVLVGT-SRRTKGADYALENIHNIRE 209 (238)
Q Consensus 161 ~~~~~v~vgD~~~d---i~~a~~~G~~~i~v~~-~~~~~~ad~v~~~~~el~~ 209 (238)
.|+ +++|-|-..| |.-|..+|+++|++.. ......-|+.|+..++=..
T Consensus 118 ~P~-llIV~Dp~~d~qAI~EA~~lnIPvIal~DTds~p~~VDy~IP~Ndds~~ 169 (249)
T PTZ00254 118 EPR-LLIVTDPRTDHQAIREASYVNIPVIALCDTDSPLEYVDIAIPCNNRGKE 169 (249)
T ss_pred CCC-EEEEeCCCcchHHHHHHHHhCCCEEEEecCCCCcccCceeeCCCCchHH
Confidence 444 6667777766 6677778999997744 4445668888887776333
No 291
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=32.65 E-value=1.6e+02 Score=24.27 Aligned_cols=78 Identities=14% Similarity=0.125 Sum_probs=52.0
Q ss_pred CCChhHHHHHhcCCC--CeEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEE
Q 035566 89 KPDPVLRNLLLSLPI--RKVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRL 166 (238)
Q Consensus 89 ~~~~~~~~~l~~l~~--~~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v 166 (238)
...||+.-+|..+.. .+++.|+...-.+..+++.+.-..+...-+.++......+ .. .+-+.++|-++..++
T Consensus 214 ~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~lDP~g~IsYkLfr~~t~y~~G-----~H-vKdls~LNRdl~kVi 287 (393)
T KOG2832|consen 214 KKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDALDPKGYISYKLFRGATKYEEG-----HH-VKDLSKLNRDLQKVI 287 (393)
T ss_pred ccCchHHHHHHhhcccceEEEEecCCccchhhhHhhcCCcceEEEEEecCcccccCc-----cc-hhhhhhhccccceeE
Confidence 356899999998863 3678888877778888888766555554444443332221 11 222578899999999
Q ss_pred EEeCCc
Q 035566 167 FFDDST 172 (238)
Q Consensus 167 ~vgD~~ 172 (238)
+|+=..
T Consensus 288 vVd~d~ 293 (393)
T KOG2832|consen 288 VVDFDA 293 (393)
T ss_pred EEEccc
Confidence 998443
No 292
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=32.48 E-value=2.8e+02 Score=22.66 Aligned_cols=126 Identities=10% Similarity=0.008 Sum_probs=60.8
Q ss_pred hhHHHHHhcCCCCeEEEecC-ChHHHHHHHHhcCcccccceeeecccCCCCCCC-CCchHHHHHHHHhcCCCCCeEEEEe
Q 035566 92 PVLRNLLLSLPIRKVIFSNA-DEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKT-TGQELQLISMLRMVAHHFFQRLFFD 169 (238)
Q Consensus 92 ~~~~~~l~~l~~~~~i~t~~-~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~-~~~~~~~~~~~~~~~~~~~~~v~vg 169 (238)
..+.+.+.......++.|+- ....++..++.+.-....+.++-.....++-|. .-+-..+..+.+.+++ .+-+.
T Consensus 137 ~plik~iA~~~kPiIlSTGma~~~ei~~av~~~r~~g~~~i~LLhC~s~YPap~ed~NL~~i~~l~~~Fn~----~vGlS 212 (347)
T COG2089 137 LPLIKYIAKKGKPIILSTGMATIEEIEEAVAILRENGNPDIALLHCTSAYPAPFEDVNLKAIPKLAEAFNA----IVGLS 212 (347)
T ss_pred hHHHHHHHhcCCCEEEEcccccHHHHHHHHHHHHhcCCCCeEEEEecCCCCCCHHHhhHHHHHHHHHHhCC----ccccc
Confidence 34555555555544444442 223444444333222223444433323333320 0111223333456654 36677
Q ss_pred CCccch---hHHHhcCCeEE--EecCCCCCcccccccc----ChhHHHHHhHHhhhccccc
Q 035566 170 DSTRNI---ECGKSIGLHTV--LVGTSRRTKGADYALE----NIHNIREAFPELWDADEIS 221 (238)
Q Consensus 170 D~~~di---~~a~~~G~~~i--~v~~~~~~~~ad~v~~----~~~el~~~l~~~~~~~~~~ 221 (238)
|+.-++ .+|...|...+ .+.-.....++|..+. .+.++.+.+.+++.++|++
T Consensus 213 DHT~g~~a~l~AvALGA~viEKHFtldk~~~GpD~~fSldP~efk~mv~~ir~~~~alG~~ 273 (347)
T COG2089 213 DHTLGILAPLAAVALGASVIEKHFTLDKSREGPDHAFSLDPDEFKEMVDAIRQVEKALGDG 273 (347)
T ss_pred cCccchhHHHHHHHhcccceeeeeeecCCCCCCCcceecCHHHHHHHHHHHHHHHHHhCCC
Confidence 888773 34555665444 3333334567776654 4455556667777777776
No 293
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=32.35 E-value=3.7e+02 Score=26.09 Aligned_cols=66 Identities=9% Similarity=0.032 Sum_probs=43.4
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccc-hhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHh
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRN-IECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPEL 214 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~d-i~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~ 214 (238)
+..+.++++++|++.-....+. +..+ ...+...|.+.+.=.....-...-.++.+-+||...+.+.
T Consensus 671 K~~f~~ll~~~GIp~P~~~~~~-s~ee~~~~~~~igyPvVVKP~~~~Gg~gv~iv~~~eeL~~~l~~~ 737 (1068)
T PRK12815 671 RDRFYQLLDELGLPHVPGLTAT-DEEEAFAFAKRIGYPVLIRPSYVIGGQGMAVVYDEPALEAYLAEN 737 (1068)
T ss_pred HHHHHHHHHHcCcCCCCeEEeC-CHHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHh
Confidence 5556778899999665666554 4455 5667788987664332222233455788889998888765
No 294
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=32.12 E-value=32 Score=25.32 Aligned_cols=13 Identities=23% Similarity=0.319 Sum_probs=11.4
Q ss_pred eEEEEecCCceee
Q 035566 5 ECLLFDVDDTLYS 17 (238)
Q Consensus 5 k~vifD~DGTL~~ 17 (238)
+.|-||+|||++.
T Consensus 59 ~~v~~D~~GT~m~ 71 (271)
T PF06901_consen 59 HTVTFDFQGTKMV 71 (271)
T ss_pred eeEEEeccceEEE
Confidence 4789999999987
No 295
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=31.81 E-value=30 Score=29.79 Aligned_cols=19 Identities=26% Similarity=0.502 Sum_probs=14.9
Q ss_pred eEEEEecCCceeeCccchh
Q 035566 5 ECLLFDVDDTLYSHSYGFS 23 (238)
Q Consensus 5 k~vifD~DGTL~~~~~~~~ 23 (238)
+.+++|+||||+.+...++
T Consensus 51 ~t~v~d~~g~Ll~s~s~Fp 69 (525)
T PLN02588 51 HTLIFNVEGALLKSNSLFP 69 (525)
T ss_pred ceEEEecccceeccCCCCc
Confidence 4699999999998655443
No 296
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=31.73 E-value=1.8e+02 Score=20.35 Aligned_cols=61 Identities=15% Similarity=0.156 Sum_probs=39.5
Q ss_pred chHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhc-----CCeEEEecCCCCCccccccccChhHH
Q 035566 147 QELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSI-----GLHTVLVGTSRRTKGADYALENIHNI 207 (238)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~-----G~~~i~v~~~~~~~~ad~v~~~~~el 207 (238)
+.+.+...++.+|.+......+.|....+..+-.. +...+..+.|-..-.-|++.+-+.++
T Consensus 21 n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~~~DlVittGG~s~g~~D~t~~al~~~ 86 (152)
T cd00886 21 SGPALVELLEEAGHEVVAYEIVPDDKDEIREALIEWADEDGVDLILTTGGTGLAPRDVTPEATRPL 86 (152)
T ss_pred hHHHHHHHHHHcCCeeeeEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcCcHHHHHHH
Confidence 45566667899999888888899999886554321 44445444444445556665555554
No 297
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=31.31 E-value=1.7e+02 Score=26.03 Aligned_cols=19 Identities=11% Similarity=0.046 Sum_probs=16.8
Q ss_pred HhcCCCCCeEEEEeCCccc
Q 035566 156 RMVAHHFFQRLFFDDSTRN 174 (238)
Q Consensus 156 ~~~~~~~~~~v~vgD~~~d 174 (238)
+.+|-..++++++|||.-.
T Consensus 462 allG~TgEriv~aGDSAGg 480 (880)
T KOG4388|consen 462 ALLGSTGERIVLAGDSAGG 480 (880)
T ss_pred HHhCcccceEEEeccCCCc
Confidence 7889999999999999754
No 298
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=30.91 E-value=54 Score=19.63 Aligned_cols=24 Identities=17% Similarity=0.032 Sum_probs=18.8
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCc
Q 035566 149 LQLISMLRMVAHHFFQRLFFDDST 172 (238)
Q Consensus 149 ~~~~~~~~~~~~~~~~~v~vgD~~ 172 (238)
.++...+++.|+.+.++|.|||-.
T Consensus 43 ~Gv~~~L~~~G~~~GD~V~Ig~~e 66 (69)
T TIGR03595 43 LGVEDALRKAGAKDGDTVRIGDFE 66 (69)
T ss_pred CCHHHHHHHcCCCCCCEEEEccEE
Confidence 335667789999999999999853
No 299
>COG0019 LysA Diaminopimelate decarboxylase [Amino acid transport and metabolism]
Probab=30.67 E-value=1.3e+02 Score=25.19 Aligned_cols=31 Identities=13% Similarity=0.162 Sum_probs=20.0
Q ss_pred cCCCCCeEEEEeCCccc--hhHHHhcCCeEEEe
Q 035566 158 VAHHFFQRLFFDDSTRN--IECGKSIGLHTVLV 188 (238)
Q Consensus 158 ~~~~~~~~v~vgD~~~d--i~~a~~~G~~~i~v 188 (238)
.|++|+++++-|....+ +..|...|++.+-+
T Consensus 92 aG~~~~~I~f~g~~ks~~ei~~a~e~gi~~i~v 124 (394)
T COG0019 92 AGFPPERIVFSGPAKSEEEIAFALELGIKLINV 124 (394)
T ss_pred cCCChhhEEECCCCCCHHHHHHHHHcCCcEEEe
Confidence 37777777777766544 77777777664444
No 300
>COG2920 DsrC Dissimilatory sulfite reductase (desulfoviridin), gamma subunit [Inorganic ion transport and metabolism]
Probab=30.60 E-value=1.6e+02 Score=19.33 Aligned_cols=51 Identities=31% Similarity=0.412 Sum_probs=30.1
Q ss_pred eEEEEecCCceeeCccchhhHHHHHHHHHHHHHhCCChhH----HHHHHHHHHHhhccch
Q 035566 5 ECLLFDVDDTLYSHSYGFSNKCSKNIEEYMIQKLGIEESE----VSEFNRVLYKNYGTSM 60 (238)
Q Consensus 5 k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~ 60 (238)
+-|-.|=||-|.++ +.....+ .+.+.++.++.... ...+.+.||..++.+.
T Consensus 9 k~i~~D~dGyL~~~-~dW~E~v----Ae~lA~~e~i~LT~eHWevv~fvR~fy~ef~tsP 63 (111)
T COG2920 9 KEIETDEDGYLKDS-EDWSEKV----AEALAEREGIELTEEHWEVVRFVREFYEEFNTSP 63 (111)
T ss_pred eEEeecccchhcCh-hhhCHHH----HHHHHHHhccCccHHHHHHHHHHHHHHHHHCCCc
Confidence 57889999999994 3333333 34566666664332 2334456666666544
No 301
>COG4018 Uncharacterized protein conserved in archaea [Function unknown]
Probab=30.57 E-value=53 Score=26.57 Aligned_cols=34 Identities=12% Similarity=0.005 Sum_probs=24.4
Q ss_pred hHHHHH---HHHhcCCCCCeEEEEeCCccchhHHHhc
Q 035566 148 ELQLIS---MLRMVAHHFFQRLFFDDSTRNIECGKSI 181 (238)
Q Consensus 148 ~~~~~~---~~~~~~~~~~~~v~vgD~~~di~~a~~~ 181 (238)
-.++.. .+++.|-..+-+++|||++.|+....++
T Consensus 205 LeEmk~VaEtArk~GkGveaI~hvgDGyDdli~G~kA 241 (505)
T COG4018 205 LEEMKRVAETARKSGKGVEAILHVGDGYDDLIDGLKA 241 (505)
T ss_pred HHHHHHHHHHHHHhCCCceeEEEecCCcHHHHHHHHH
Confidence 444444 3588888889999999999995544444
No 302
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=30.49 E-value=22 Score=21.71 Aligned_cols=9 Identities=44% Similarity=0.700 Sum_probs=8.2
Q ss_pred EEecCCcee
Q 035566 8 LFDVDDTLY 16 (238)
Q Consensus 8 ifD~DGTL~ 16 (238)
=||++|.++
T Consensus 4 RFdf~G~l~ 12 (73)
T PF08620_consen 4 RFDFDGNLL 12 (73)
T ss_pred cccCCCCEe
Confidence 499999999
No 303
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=30.26 E-value=2e+02 Score=25.30 Aligned_cols=74 Identities=5% Similarity=0.038 Sum_probs=43.7
Q ss_pred CCeEEEecC-ChHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhc
Q 035566 103 IRKVIFSNA-DEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSI 181 (238)
Q Consensus 103 ~~~~i~t~~-~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~ 181 (238)
.+.++++-. ....+..+.+.+++. ++.+...... .......-++..|++ ++|||+.. ...|..+
T Consensus 108 ~~iavv~~~~~~~~~~~~~~~l~~~--i~~~~~~~~~--------e~~~~v~~lk~~G~~----~vvG~~~~-~~~A~~~ 172 (538)
T PRK15424 108 SSIGVVTYQETIPALVAFQKTFNLR--IEQRSYVTEE--------DARGQINELKANGIE----AVVGAGLI-TDLAEEA 172 (538)
T ss_pred CcEEEEecCcccHHHHHHHHHhCCc--eEEEEecCHH--------HHHHHHHHHHHCCCC----EEEcCchH-HHHHHHh
Confidence 344555443 344555566666654 3332222210 133333445677875 88999765 8999999
Q ss_pred CCeEEEecCC
Q 035566 182 GLHTVLVGTS 191 (238)
Q Consensus 182 G~~~i~v~~~ 191 (238)
|+..+++..+
T Consensus 173 g~~g~~~~s~ 182 (538)
T PRK15424 173 GMTGIFIYSA 182 (538)
T ss_pred CCceEEecCH
Confidence 9999998643
No 304
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=29.31 E-value=76 Score=24.02 Aligned_cols=34 Identities=24% Similarity=0.229 Sum_probs=23.4
Q ss_pred HHHHHhcCC---CCeEEEecCChHHHHHHHHhcCccc
Q 035566 94 LRNLLLSLP---IRKVIFSNADEIHVAKVLRKLGLED 127 (238)
Q Consensus 94 ~~~~l~~l~---~~~~i~t~~~~~~~~~~l~~~~~~~ 127 (238)
..+.|++++ ...+++|+.+...+...++.+|+..
T Consensus 20 ~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 20 AREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 344555444 3456888888888888888888754
No 305
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=29.06 E-value=4.9e+02 Score=25.25 Aligned_cols=70 Identities=9% Similarity=-0.013 Sum_probs=45.4
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhhhc
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDA 217 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~~ 217 (238)
+..+.++++++|++.-....+.+...-...+...|.+.+.=.....-...-.++.+.+||...+...+..
T Consensus 670 K~~~~~~L~~~GIp~P~~~~~~s~ee~~~~~~~igyPvvVKP~~~~Gg~Gv~iv~~~eeL~~~~~~a~~~ 739 (1066)
T PRK05294 670 RERFSKLLEKLGIPQPPNGTATSVEEALEVAEEIGYPVLVRPSYVLGGRAMEIVYDEEELERYMREAVKV 739 (1066)
T ss_pred HHHHHHHHHHcCcCCCCeEEECCHHHHHHHHHhcCCCeEEEeCCCCCCCcEEEECCHHHHHHHHHHHHhh
Confidence 4556677899999766667665543335667788887554332222223346778999999888876653
No 306
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=28.91 E-value=24 Score=23.98 Aligned_cols=15 Identities=13% Similarity=0.146 Sum_probs=12.5
Q ss_pred ceeEEEEecCCceee
Q 035566 3 KYECLLFDVDDTLYS 17 (238)
Q Consensus 3 ~~k~vifD~DGTL~~ 17 (238)
....|.||+.+||-.
T Consensus 44 ~P~iV~FDmK~Tld~ 58 (128)
T PRK13717 44 APVTAAFNMKQTVDA 58 (128)
T ss_pred CCeEEEEehHHHHHH
Confidence 357899999999866
No 307
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=28.76 E-value=44 Score=30.77 Aligned_cols=37 Identities=14% Similarity=0.075 Sum_probs=25.8
Q ss_pred EEEEeCCccchhHHHhcCCeEEEecCCC--CCccccccc
Q 035566 165 RLFFDDSTRNIECGKSIGLHTVLVGTSR--RTKGADYAL 201 (238)
Q Consensus 165 ~v~vgD~~~di~~a~~~G~~~i~v~~~~--~~~~ad~v~ 201 (238)
+-+.||+.||-.+.+++.+..++--.|. .+..||.+.
T Consensus 708 VaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmIL 746 (1019)
T KOG0203|consen 708 VAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMIL 746 (1019)
T ss_pred EEEeCCCcCCChhhcccccceeeccccchHHHhhcceEE
Confidence 4457999999999999998766532222 255666554
No 308
>PF13382 Adenine_deam_C: Adenine deaminase C-terminal domain; PDB: 3T8L_B 3T81_A 3NQB_A.
Probab=28.74 E-value=61 Score=23.53 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=22.0
Q ss_pred hcCCCCCeEEEEeCCccchhHHHhc----CCeEEEecCCC
Q 035566 157 MVAHHFFQRLFFDDSTRNIECGKSI----GLHTVLVGTSR 192 (238)
Q Consensus 157 ~~~~~~~~~v~vgD~~~di~~a~~~----G~~~i~v~~~~ 192 (238)
...-+..+++++|++..|+..|.+. |=..+.+..+.
T Consensus 60 S~ahDshniiviG~~~~dm~~A~n~l~~~gGG~vvv~~g~ 99 (171)
T PF13382_consen 60 SVAHDSHNIIVIGTNDEDMALAANRLIEMGGGIVVVDDGE 99 (171)
T ss_dssp S--TTT--EEEEESSHHHHHHHHHHHHHTTSEEEEEETTE
T ss_pred EcccCCCCEEEEECCHHHHHHHHHHHHHhCCCEEEEECCE
Confidence 3445778999999999996666543 44455665554
No 309
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=28.71 E-value=81 Score=23.44 Aligned_cols=38 Identities=3% Similarity=-0.065 Sum_probs=27.7
Q ss_pred CChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccc
Q 035566 90 PDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLED 127 (238)
Q Consensus 90 ~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~ 127 (238)
..+...+.|++++.+ .+++|+.+...+..+.+.+++..
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~ 59 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG 59 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence 445667777777544 46888888888888888888763
No 310
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=28.23 E-value=1.3e+02 Score=23.13 Aligned_cols=36 Identities=17% Similarity=0.318 Sum_probs=25.7
Q ss_pred hhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccc
Q 035566 92 PVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLED 127 (238)
Q Consensus 92 ~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~ 127 (238)
+...+.|++++.+ .+++|+.+...+...++.+++..
T Consensus 23 ~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 23 PAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ 61 (270)
T ss_pred HHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence 4455666666544 56888888888888888888753
No 311
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=28.05 E-value=2.4e+02 Score=20.62 Aligned_cols=43 Identities=14% Similarity=0.098 Sum_probs=22.1
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccc--hhHHHhcCCeEEEecCCC
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRN--IECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~d--i~~a~~~G~~~i~v~~~~ 192 (238)
...+..+++++ .|+-+++++--.+= +..+++.|++.+++|.--
T Consensus 84 ~~~~~rfl~~~--~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarl 128 (186)
T PF04413_consen 84 PWAVRRFLDHW--RPDLLIWVETELWPNLLREAKRRGIPVVLVNARL 128 (186)
T ss_dssp HHHHHHHHHHH----SEEEEES----HHHHHH-----S-EEEEEE--
T ss_pred HHHHHHHHHHh--CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeee
Confidence 44455566766 67889999877544 999999999999997643
No 312
>PF02786 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, ATP binding domain; InterPro: IPR005479 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the ATP-binding domain found in the large subunit of carbamoyl phosphate synthase, as well as in related proteins.; GO: 0003824 catalytic activity, 0005524 ATP binding, 0008152 metabolic process; PDB: 3U9S_A 3U9T_A 2C00_B 2VQD_A 1W96_B 1W93_A 1M6V_C 1CS0_C 1C30_E 1C3O_G ....
Probab=27.75 E-value=96 Score=23.32 Aligned_cols=69 Identities=12% Similarity=0.119 Sum_probs=40.8
Q ss_pred HHHHHHHhcCCCCCeEEEE-eCCccc-hhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhhhcc
Q 035566 150 QLISMLRMVAHHFFQRLFF-DDSTRN-IECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDAD 218 (238)
Q Consensus 150 ~~~~~~~~~~~~~~~~v~v-gD~~~d-i~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~~~ 218 (238)
.+.++++++|++.-..... -++..+ +..|+..|.+.+.=.....--..-.++.+.+||.+.+.......
T Consensus 4 ~~~~~~~~~gvp~~pg~~~~~~~~eea~~~a~~iGyPVliKas~ggGG~gm~iv~~~~eL~~~~~~~~~~s 74 (211)
T PF02786_consen 4 RFRKLAKKLGVPVPPGSTVPISSVEEALEFAEEIGYPVLIKASAGGGGRGMRIVHNEEELEEAFERAQRES 74 (211)
T ss_dssp HHHHHHHHTT-BBSSBESSSBSSHHHHHHHHHHH-SSEEEEETTSSTTTSEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhcCCceEEeecccccccccccccchhhhhhhhhhccccC
Confidence 4566788898754222222 345555 88889999985432222222234457789999998887766555
No 313
>PRK10671 copA copper exporting ATPase; Provisional
Probab=27.17 E-value=35 Score=31.63 Aligned_cols=21 Identities=24% Similarity=0.306 Sum_probs=17.1
Q ss_pred CceeEEEEecCCceeeCccch
Q 035566 2 TKYECLLFDVDDTLYSHSYGF 22 (238)
Q Consensus 2 ~~~k~vifD~DGTL~~~~~~~ 22 (238)
.+++.|+||-.|||+.....+
T Consensus 515 ~~v~~v~fDKTGTLT~g~~~v 535 (834)
T PRK10671 515 STLDTLVFDKTGTLTEGKPQV 535 (834)
T ss_pred cCCCEEEEcCCCccccCceEE
Confidence 467899999999999875543
No 314
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=26.66 E-value=3.3e+02 Score=21.71 Aligned_cols=75 Identities=13% Similarity=0.068 Sum_probs=42.5
Q ss_pred chHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhc---------CCeE-EEe-----------cCCC-------C-Cccc
Q 035566 147 QELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSI---------GLHT-VLV-----------GTSR-------R-TKGA 197 (238)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~---------G~~~-i~v-----------~~~~-------~-~~~a 197 (238)
+-..++..++..|+ .++.|||+=|.+-|.+-. |-.. +.+ ||+. . ....
T Consensus 163 ~~D~lf~~a~~~gi---~tigIGDGGNEiGMG~v~~~v~~~i~~g~~ia~~v~aD~liva~VSNWGayaL~a~l~~l~~~ 239 (291)
T PF14336_consen 163 PLDDLFLAAKEPGI---PTIGIGDGGNEIGMGNVKEAVKKHIPNGDKIACVVAADELIVAGVSNWGAYALAAALSLLSGW 239 (291)
T ss_pred cHHHHHHHhhcCCC---CEEEECCCchhcccChHHHHHHHhCCCCCceEEeeecceeeeCCCCChHHHHHHHHHHHhhcc
Confidence 34445555566565 489999999988776652 1110 111 2221 0 1222
Q ss_pred cccccChhHHHHHhHHhhhcccccccc
Q 035566 198 DYALENIHNIREAFPELWDADEISKNI 224 (238)
Q Consensus 198 d~v~~~~~el~~~l~~~~~~~~~~~~~ 224 (238)
...+.+.++-.+++..+.++.......
T Consensus 240 ~~~l~~~~~e~~~L~~lv~~G~vDGvt 266 (291)
T PF14336_consen 240 KNLLPSPEEEEKLLEALVEAGAVDGVT 266 (291)
T ss_pred hhhcCChHHHHHHHHHHHHcCCccCCc
Confidence 446677777777777777776555333
No 315
>PRK02186 argininosuccinate lyase; Provisional
Probab=26.58 E-value=5.6e+02 Score=24.27 Aligned_cols=115 Identities=14% Similarity=0.083 Sum_probs=62.7
Q ss_pred hHHHHHhcCCCCeEEEecCC--hHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeC
Q 035566 93 VLRNLLLSLPIRKVIFSNAD--EIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDD 170 (238)
Q Consensus 93 ~~~~~l~~l~~~~~i~t~~~--~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD 170 (238)
.+.++++.+..-.++++++. ......+.+.+|+... + .+..... ..+..+.+.++..|++.-+...+.+
T Consensus 60 ~l~~~~~~~~~i~~V~~~se~~v~~aa~lae~lglpg~-~----~ea~~~~----~dK~~~r~~L~~~GIp~P~~~~v~~ 130 (887)
T PRK02186 60 RIHRFVSSLDGVAGIMSSSEYFIEVASEVARRLGLPAA-N----TEAIRTC----RDKKRLARTLRDHGIDVPRTHALAL 130 (887)
T ss_pred HHHHHHHhcCCCCEEEeCchhhHHHHHHHHHHhCcCCC-C----HHHHHHh----cCHHHHHHHHHHcCCCCCCEEEeCC
Confidence 34455555432235666543 3344456666776521 1 0111111 1356667778999987655655543
Q ss_pred Cccc-hhHHHhcCCeEEEecCCCCCccccccccChhHHHHHhHHhhhc
Q 035566 171 STRN-IECGKSIGLHTVLVGTSRRTKGADYALENIHNIREAFPELWDA 217 (238)
Q Consensus 171 ~~~d-i~~a~~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~~ 217 (238)
..+ ...+...|.+.|.=.....-..--+++.+.+|+.+.+..+++.
T Consensus 131 -~~e~~~~~~~~~~PvVVKP~~g~gS~GV~~v~~~~el~~a~~~~~~~ 177 (887)
T PRK02186 131 -RAVALDALDGLTYPVVVKPRMGSGSVGVRLCASVAEAAAHCAALRRA 177 (887)
T ss_pred -HHHHHHHHHhCCCCEEEEeCCCCCCCCeEEECCHHHHHHHHHHHHhc
Confidence 455 3445677887664433222222335678999998888776653
No 316
>PRK08304 stage V sporulation protein AD; Validated
Probab=26.27 E-value=2.7e+02 Score=22.76 Aligned_cols=69 Identities=13% Similarity=0.093 Sum_probs=39.4
Q ss_pred CcccccceeeecccCCCCCCCCCch----HHHHHHHHhcCCCCC--eEEEEeCCccch----hHHHhcCCeEEEecCCC
Q 035566 124 GLEDCFDGIVNFESLNPTNKTTGQE----LQLISMLRMVAHHFF--QRLFFDDSTRNI----ECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 124 ~~~~~f~~i~~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~--~~v~vgD~~~di----~~a~~~G~~~i~v~~~~ 192 (238)
.+.++||.++.-...+...+..... ..+.+.+++-|++++ +.+++||..+-. ..++..|++...+....
T Consensus 33 pl~~~fd~~~~d~~~Ge~swEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGIPa~dV~gAC 111 (337)
T PRK08304 33 PLGKYFDKILDDDYCGEKSWEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGIPFLGLYGAC 111 (337)
T ss_pred CChhhCCeEecccccCCcCccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCCcEEEEeccC
Confidence 3567888887655444322111111 123334577788876 578899875433 24567788776665543
No 317
>KOG0622 consensus Ornithine decarboxylase [Amino acid transport and metabolism]
Probab=26.24 E-value=1.8e+02 Score=24.57 Aligned_cols=31 Identities=6% Similarity=0.089 Sum_probs=16.7
Q ss_pred HhcCCCCCeEEEEeCC--ccchhHHHhcCCeEE
Q 035566 156 RMVAHHFFQRLFFDDS--TRNIECGKSIGLHTV 186 (238)
Q Consensus 156 ~~~~~~~~~~v~vgD~--~~di~~a~~~G~~~i 186 (238)
..+|++|+++|+.+-- ...|.-|...|+..-
T Consensus 117 l~~gv~P~riIyanpcK~~s~IkyAa~~gV~~~ 149 (448)
T KOG0622|consen 117 LSLGVSPERIIYANPCKQVSQIKYAAKHGVSVM 149 (448)
T ss_pred HhcCCChHHeEecCCCccHHHHHHHHHcCCeEE
Confidence 4566666666665533 344555555555433
No 318
>PRK03957 V-type ATP synthase subunit F; Provisional
Probab=26.04 E-value=1.5e+02 Score=19.25 Aligned_cols=22 Identities=18% Similarity=0.185 Sum_probs=17.2
Q ss_pred eEEEEeCCccchhHHHhcCCeEE
Q 035566 164 QRLFFDDSTRNIECGKSIGLHTV 186 (238)
Q Consensus 164 ~~v~vgD~~~di~~a~~~G~~~i 186 (238)
++.++|| ...+...+.+|+..+
T Consensus 2 kIaVIgD-~dtv~GFrLaGi~~~ 23 (100)
T PRK03957 2 KIAVVGD-RDTVTGFRLAGLTEV 23 (100)
T ss_pred EEEEEeC-HHHHHHHHHcCCCce
Confidence 4678999 455999999999643
No 319
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=26.03 E-value=2.2e+02 Score=23.21 Aligned_cols=46 Identities=15% Similarity=0.242 Sum_probs=31.4
Q ss_pred CCCeEEEEeCCccc---hhHHHhcCCeEEEecC-CCCCccccccccChhHH
Q 035566 161 HFFQRLFFDDSTRN---IECGKSIGLHTVLVGT-SRRTKGADYALENIHNI 207 (238)
Q Consensus 161 ~~~~~v~vgD~~~d---i~~a~~~G~~~i~v~~-~~~~~~ad~v~~~~~el 207 (238)
.|+ +++|=|...+ |.-|+.+|+++|.+.. .......||.|+-.++=
T Consensus 152 ~Pd-~viv~d~~~e~~AI~EA~kl~IPvIaivDTn~dp~~IdypIP~NDds 201 (326)
T PRK12311 152 LPD-LLFVIDTNKEDIAIQEAQRLGIPVAAIVDTNCDPDGITYPVPGNDDA 201 (326)
T ss_pred CCC-EEEEeCCccchHHHHHHHHcCCCEEEEeeCCCCccccceeecCCCch
Confidence 455 5556565555 7888889999997744 33455678888877763
No 320
>PF02091 tRNA-synt_2e: Glycyl-tRNA synthetase alpha subunit; InterPro: IPR002310 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. In eubacteria, glycyl-tRNA synthetase (6.1.1.14 from EC) is an alpha2/beta2 tetramer composed of 2 different subunits [, , ]. In some eubacteria, in archaea and eukaryota, glycyl-tRNA synthetase is an alpha2 dimer (see IPR002315 from INTERPRO). It belongs to class IIc and is one of the most complex synthetases. What is most interesting is the lack of similarity between the two types: divergence at the sequence level is so great that it is impossible to infer descent from common genes. The alpha and beta subunits (see IPR002311 from INTERPRO) also lack significant sequence similarity. However, they are translated from a single mRNA [], and a single chain glycyl-tRNA synthetase from Chlamydia trachomatis has been found to have significant similarity with both domains, suggesting divergence from a single polypeptide chain []. This entry represents the alpha subunit of glycyl-tRNA synthetase.; GO: 0000166 nucleotide binding, 0004820 glycine-tRNA ligase activity, 0005524 ATP binding, 0006426 glycyl-tRNA aminoacylation, 0005737 cytoplasm; PDB: 3RF1_A 3UFG_B 3RGL_B 1J5W_B.
Probab=25.88 E-value=52 Score=25.60 Aligned_cols=45 Identities=11% Similarity=0.058 Sum_probs=28.7
Q ss_pred CCCCCchHHHHHH-HHhcCCCC--CeEEEEeCCccc-hhHHHhcCCeEE
Q 035566 142 NKTTGQELQLISM-LRMVAHHF--FQRLFFDDSTRN-IECGKSIGLHTV 186 (238)
Q Consensus 142 k~~~~~~~~~~~~-~~~~~~~~--~~~v~vgD~~~d-i~~a~~~G~~~i 186 (238)
||.+.+-.++|.- ++.+|+++ .++-||.|.... .-.|...||-+.
T Consensus 80 KPsP~niq~lYL~SL~~lGId~~~hDIRFVEDnWEsPtLGAwGlGWEVW 128 (284)
T PF02091_consen 80 KPSPDNIQELYLESLEALGIDPKEHDIRFVEDNWESPTLGAWGLGWEVW 128 (284)
T ss_dssp ES--TTHHHHHHHHHHHCT--CCCS-EEEEEE-EEETTTTEEEEEEEEE
T ss_pred cCCCccHHHHHHHHHHHhCCCccccceeEeecCCCCCcccccccccEEE
Confidence 3444455556654 89999877 689999999776 888888888543
No 321
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=25.52 E-value=1.1e+02 Score=22.91 Aligned_cols=37 Identities=3% Similarity=-0.096 Sum_probs=25.9
Q ss_pred hhHHHHHhcCCC---CeEEEecCChHHHHHHHHhcCcccc
Q 035566 92 PVLRNLLLSLPI---RKVIFSNADEIHVAKVLRKLGLEDC 128 (238)
Q Consensus 92 ~~~~~~l~~l~~---~~~i~t~~~~~~~~~~l~~~~~~~~ 128 (238)
+...+.|++++. ..+++|+.+...+...++.+++..+
T Consensus 23 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 62 (230)
T PRK01158 23 LKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGP 62 (230)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCc
Confidence 445566666653 3568888888888888888887643
No 322
>CHL00067 rps2 ribosomal protein S2
Probab=24.96 E-value=1.9e+02 Score=22.09 Aligned_cols=51 Identities=10% Similarity=0.083 Sum_probs=34.5
Q ss_pred CCCeEEEEeCCccc---hhHHHhcCCeEEEecCCC-CCccccccccChhHHHHHhH
Q 035566 161 HFFQRLFFDDSTRN---IECGKSIGLHTVLVGTSR-RTKGADYALENIHNIREAFP 212 (238)
Q Consensus 161 ~~~~~v~vgD~~~d---i~~a~~~G~~~i~v~~~~-~~~~ad~v~~~~~el~~~l~ 212 (238)
.|+ +++|=|...| +.-|..+|+++|++.... .....|+.++-.++=...+.
T Consensus 161 ~P~-~iiv~d~~~~~~ai~Ea~~l~IPvIaivDTn~~p~~idypIP~Ndds~~si~ 215 (230)
T CHL00067 161 LPD-IVIIIDQQEEYTALRECRKLGIPTISILDTNCDPDLADIPIPANDDAIASIK 215 (230)
T ss_pred CCC-EEEEeCCcccHHHHHHHHHcCCCEEEEEeCCCCccccceeeecCCchHHHHH
Confidence 444 6666666655 778888999999874443 45567888887776444443
No 323
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=24.36 E-value=84 Score=20.85 Aligned_cols=16 Identities=19% Similarity=0.407 Sum_probs=8.3
Q ss_pred hHHHhcCCeEEEecCC
Q 035566 176 ECGKSIGLHTVLVGTS 191 (238)
Q Consensus 176 ~~a~~~G~~~i~v~~~ 191 (238)
..|+.+|+..+.+.-.
T Consensus 51 ~~a~~~Gl~y~~iPv~ 66 (110)
T PF04273_consen 51 AAAEALGLQYVHIPVD 66 (110)
T ss_dssp HHHHHCT-EEEE----
T ss_pred HHHHHcCCeEEEeecC
Confidence 5677888887777544
No 324
>KOG0183 consensus 20S proteasome, regulatory subunit alpha type PSMA7/PRE6 [Posttranslational modification, protein turnover, chaperones]
Probab=23.85 E-value=1.3e+02 Score=22.73 Aligned_cols=22 Identities=32% Similarity=0.336 Sum_probs=13.8
Q ss_pred EEEEecCCc--eeeCcc-chhhHHH
Q 035566 6 CLLFDVDDT--LYSHSY-GFSNKCS 27 (238)
Q Consensus 6 ~vifD~DGT--L~~~~~-~~~~~~~ 27 (238)
+.-||-||| |+.+++ .++.+|+
T Consensus 134 i~GfD~~g~p~lyqtePsG~f~ewk 158 (249)
T KOG0183|consen 134 IGGFDPDGTPRLYQTEPSGIFSEWK 158 (249)
T ss_pred EEeeCCCCCeeeEeeCCCcchhhhh
Confidence 467999998 666544 3444443
No 325
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=23.67 E-value=1.5e+02 Score=21.99 Aligned_cols=28 Identities=18% Similarity=0.266 Sum_probs=20.7
Q ss_pred hcCCCCeEEEecCChHHHHHHHHhcCcc
Q 035566 99 LSLPIRKVIFSNADEIHVAKVLRKLGLE 126 (238)
Q Consensus 99 ~~l~~~~~i~t~~~~~~~~~~l~~~~~~ 126 (238)
++.....+++|+.+...+...++.+++.
T Consensus 29 ~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 29 QEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3334456788888888888888888875
No 326
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=23.59 E-value=1.2e+02 Score=20.81 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=20.3
Q ss_pred HHHhcCCCCCeEEEE----eCCccchh---HHHhcCCeEEEec
Q 035566 154 MLRMVAHHFFQRLFF----DDSTRNIE---CGKSIGLHTVLVG 189 (238)
Q Consensus 154 ~~~~~~~~~~~~v~v----gD~~~di~---~a~~~G~~~i~v~ 189 (238)
+.+.+++.|.+++++ |.+++-++ .|+..|+.+|.++
T Consensus 95 ~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT 137 (138)
T PF13580_consen 95 LLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT 137 (138)
T ss_dssp HHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred HHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 456677888888775 44555444 4556699988874
No 327
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=23.38 E-value=1.4e+02 Score=22.84 Aligned_cols=38 Identities=24% Similarity=0.371 Sum_probs=28.6
Q ss_pred CChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccc
Q 035566 90 PDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLED 127 (238)
Q Consensus 90 ~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~ 127 (238)
..+...+.|++++.+ .+++|+.+...+...++.+++..
T Consensus 17 i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 17 ISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT 57 (256)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 345677777777655 46899998888888898888763
No 328
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=23.32 E-value=1.2e+02 Score=23.41 Aligned_cols=38 Identities=24% Similarity=0.323 Sum_probs=28.3
Q ss_pred CChhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCccc
Q 035566 90 PDPVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLED 127 (238)
Q Consensus 90 ~~~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~ 127 (238)
..+...+.|+.++.+ .+++|+++...+..+++.+++..
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 335566667665444 56899988889999999998875
No 329
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=22.99 E-value=1.1e+02 Score=21.23 Aligned_cols=15 Identities=20% Similarity=0.348 Sum_probs=12.2
Q ss_pred eEEEEecCCceeeCc
Q 035566 5 ECLLFDVDDTLYSHS 19 (238)
Q Consensus 5 k~vifD~DGTL~~~~ 19 (238)
-+.++|+||.+++..
T Consensus 44 giAildL~G~~l~l~ 58 (138)
T PF04312_consen 44 GIAILDLDGELLDLK 58 (138)
T ss_pred EEEEEecCCcEEEEE
Confidence 467899999998843
No 330
>PF13549 ATP-grasp_5: ATP-grasp domain; PDB: 1WR2_A.
Probab=22.94 E-value=98 Score=23.54 Aligned_cols=73 Identities=18% Similarity=0.207 Sum_probs=44.0
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccchhHHHhcCCeEEEecCCCC---Ccc---ccccccChhHHHHHhHHhhhcccc
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRNIECGKSIGLHTVLVGTSRR---TKG---ADYALENIHNIREAFPELWDADEI 220 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a~~~G~~~i~v~~~~~---~~~---ad~v~~~~~el~~~l~~~~~~~~~ 220 (238)
..+.+.+++.+|++.-+...+.+...-...|...|.+.++=..+.. +.. .-.=+++-.++.+.+.++.++...
T Consensus 12 e~e~~~lL~~yGI~~~~~~~~~~~~ea~~~a~~ig~PvvlKi~sp~i~HKsd~GgV~L~l~~~~~v~~a~~~l~~~~~~ 90 (222)
T PF13549_consen 12 EAEAKELLAAYGIPVPPTRLVTSAEEAVAAAEEIGFPVVLKIVSPDIAHKSDVGGVRLNLNSPEEVREAFERLRERVAA 90 (222)
T ss_dssp HHHHHHHHHTTT------EEESSHHHHHHHHHHH-SSEEEEEE-TT---HHHHT-EEEEE-SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCeeEeCCHHHHHHHHHHhCCCEEEEEecCCCCcCCCCCcEEECCCCHHHHHHHHHHHHHHHHH
Confidence 5667778899999888888888877779999999998775433321 111 223355777788777777776554
No 331
>PRK14129 heat shock protein HspQ; Provisional
Probab=22.84 E-value=50 Score=21.60 Aligned_cols=15 Identities=20% Similarity=0.330 Sum_probs=11.2
Q ss_pred eeEEEEecCCceeeC
Q 035566 4 YECLLFDVDDTLYSH 18 (238)
Q Consensus 4 ~k~vifD~DGTL~~~ 18 (238)
++.|+||+|-+.-.+
T Consensus 19 yrGVV~DVDP~fs~~ 33 (105)
T PRK14129 19 YLGVVVDIDPEYSLE 33 (105)
T ss_pred CCeEEEeeCCCcCCC
Confidence 578888888777653
No 332
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=22.82 E-value=1.5e+02 Score=20.51 Aligned_cols=51 Identities=10% Similarity=0.103 Sum_probs=33.7
Q ss_pred EEEEeCCcc------chhHHHhcCCeEEEecCCCC-------CccccccccChhHHHHHhHHhh
Q 035566 165 RLFFDDSTR------NIECGKSIGLHTVLVGTSRR-------TKGADYALENIHNIREAFPELW 215 (238)
Q Consensus 165 ~v~vgD~~~------di~~a~~~G~~~i~v~~~~~-------~~~ad~v~~~~~el~~~l~~~~ 215 (238)
++-|||.+. |-..|...|-+.|.+....- ...|..++.+.+++.++|..++
T Consensus 77 VvrFGekYKQWNaAfDAg~a~AlgKplI~lh~~~~~HpLKEvda~A~a~~et~~Qvv~iL~Yv~ 140 (141)
T PF11071_consen 77 VVRFGEKYKQWNAAFDAGYAAALGKPLITLHPEELHHPLKEVDAAALAVAETPEQVVEILRYVL 140 (141)
T ss_pred EEEechHHHHHHHHhhHHHHHHcCCCeEEecchhccccHHHHhHhhHhhhCCHHHHHHHHHHHh
Confidence 344899874 44445555666666644431 4567788899999988887765
No 333
>cd00545 MCH Methenyltetrahydromethanopterin (methenyl-H4MPT) cyclohydrolase (MCH). MCH is a cytoplasmic enzyme that has been identified in methanogenic archaea, sulfate- reducing archaea, and methylotrophic bacteria. It catalyzes the reversible formation of N(5), N(10)-methenyltetrahydromethanopterin (methenyl-H4MPT+) from N(5)-formyltetrahydromethanopterin (formyl- H4MPT), in the third step of the reaction to reduce CO2 to CH4. The protein functions as a homodimer or homotrimer, depending on the organism.
Probab=22.70 E-value=2.2e+02 Score=22.86 Aligned_cols=47 Identities=9% Similarity=-0.060 Sum_probs=26.1
Q ss_pred HHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEE
Q 035566 117 AKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLF 167 (238)
Q Consensus 117 ~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~ 167 (238)
+...+.+++.+.++.-+..=+....+ +...+.+++++.|++|+++.+
T Consensus 118 e~ly~~l~Y~D~~~~avl~lE~~~lP----~~~v~~~vA~~cgv~p~~l~~ 164 (312)
T cd00545 118 EELYEEIGYRDDAEVAVLVLESDKLP----PEEVAEKVAAECGVDPENVTL 164 (312)
T ss_pred HHHHHHhCCccccceEEEEEecCCCC----CHHHHHHHHHHcCCCHHHEEE
Confidence 35566667666666533332233332 245555567777777776554
No 334
>PF07453 NUMOD1: NUMOD1 domain; InterPro: IPR010896 This helix-turn-helix-containing DNA-binding domain is found associated in homing nucleases [].
Probab=22.65 E-value=1.2e+02 Score=15.19 Aligned_cols=14 Identities=7% Similarity=0.287 Sum_probs=11.5
Q ss_pred eEEEEecCCceeeC
Q 035566 5 ECLLFDVDDTLYSH 18 (238)
Q Consensus 5 k~vifD~DGTL~~~ 18 (238)
+..++|++|..+..
T Consensus 2 ~V~~yd~~~~~i~~ 15 (37)
T PF07453_consen 2 PVYVYDLNTNEIKS 15 (37)
T ss_pred eEEEEECCCCeEEE
Confidence 67899999998764
No 335
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=22.64 E-value=1.5e+02 Score=18.49 Aligned_cols=7 Identities=14% Similarity=0.226 Sum_probs=2.8
Q ss_pred ChhHHHH
Q 035566 203 NIHNIRE 209 (238)
Q Consensus 203 ~~~el~~ 209 (238)
+.+|+.+
T Consensus 67 T~eEI~~ 73 (80)
T PF03698_consen 67 TAEEIVQ 73 (80)
T ss_pred CHHHHHH
Confidence 3444443
No 336
>TIGR03120 one_C_mch methenyltetrahydromethanopterin cyclohydrolase. Members of this protein family are the enzyme methenyltetrahydromethanopterin cyclohydrolase, a key enzyme for tetrahydromethanopterin (H4MPT)-linked C1 transfer metabolism.
Probab=22.21 E-value=2.3e+02 Score=22.78 Aligned_cols=47 Identities=13% Similarity=-0.041 Sum_probs=25.1
Q ss_pred HHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEE
Q 035566 117 AKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLF 167 (238)
Q Consensus 117 ~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~ 167 (238)
+...+.+++.+.++.-+..=+....+ +...+.+++++.|++|+++.+
T Consensus 118 e~ly~~l~Y~d~~~~avl~lE~~~lP----~~~v~~~vA~~cgv~p~~l~~ 164 (312)
T TIGR03120 118 KETYEEIGYEDDSDVAVIVLESDKLP----DEEVAEYIADECGVDPENLTL 164 (312)
T ss_pred HHHHHHhCCcccCceEEEEEecCCCC----CHHHHHHHHHHcCCCHHHEEE
Confidence 35566666666665533322233332 244455567777777766544
No 337
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=22.19 E-value=1.4e+02 Score=23.21 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=27.0
Q ss_pred hhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccc
Q 035566 92 PVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDC 128 (238)
Q Consensus 92 ~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~ 128 (238)
+...+.|++++.+ .+++|+.+...+...++.+++..+
T Consensus 22 ~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 61 (272)
T PRK15126 22 EKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAY 61 (272)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCc
Confidence 4556667776554 468888888888888998887643
No 338
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=22.16 E-value=88 Score=18.38 Aligned_cols=22 Identities=14% Similarity=0.181 Sum_probs=15.0
Q ss_pred eEEEEecCCceeeCccchhhHHH
Q 035566 5 ECLLFDVDDTLYSHSYGFSNKCS 27 (238)
Q Consensus 5 k~vifD~DGTL~~~~~~~~~~~~ 27 (238)
.-|+||=|+.-+++ ..+.+++.
T Consensus 25 s~iiFDNded~tdS-a~llp~ie 46 (65)
T PF06117_consen 25 SDIIFDNDEDKTDS-AALLPAIE 46 (65)
T ss_pred CCeeecCCCcccch-HHHHHHHH
Confidence 35899999999994 44444443
No 339
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=21.82 E-value=61 Score=26.85 Aligned_cols=19 Identities=32% Similarity=0.401 Sum_probs=15.5
Q ss_pred ceeEEEEecCCceeeCccc
Q 035566 3 KYECLLFDVDDTLYSHSYG 21 (238)
Q Consensus 3 ~~k~vifD~DGTL~~~~~~ 21 (238)
..+.|-||=|+|||+.-..
T Consensus 146 ~L~LvTFDgDvTLY~DG~s 164 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGAS 164 (408)
T ss_pred CceEEEEcCCcccccCCCC
Confidence 4689999999999995433
No 340
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=21.52 E-value=91 Score=25.43 Aligned_cols=87 Identities=14% Similarity=0.197 Sum_probs=47.3
Q ss_pred HHHhcCCCC--eEEEecCChHHHHHHHHhcCcccccceeeecccCCCCCCCCCch------HHHHHHHHhcCCCCCeEEE
Q 035566 96 NLLLSLPIR--KVIFSNADEIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQE------LQLISMLRMVAHHFFQRLF 167 (238)
Q Consensus 96 ~~l~~l~~~--~~i~t~~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~------~~~~~~~~~~~~~~~~~v~ 167 (238)
.++++|..+ -+++|......+..+++.+|++ .+..+... ..+. ++-. ..+++++++ ..|+ ++
T Consensus 18 ~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~~----y~~iG~~g-~~~~-~Kl~~~~~R~~~l~~~~~~--~~pD--v~ 87 (335)
T PF04007_consen 18 NIIRELEKRGHEVLITARDKDETEELLDLYGID----YIVIGKHG-DSLY-GKLLESIERQYKLLKLIKK--FKPD--VA 87 (335)
T ss_pred HHHHHHHhCCCEEEEEEeccchHHHHHHHcCCC----eEEEcCCC-CCHH-HHHHHHHHHHHHHHHHHHh--hCCC--EE
Confidence 344555544 4678888888888999998864 33322221 1110 0001 111112232 3454 44
Q ss_pred Ee-CCccchhHHHhcCCeEEEecCCC
Q 035566 168 FD-DSTRNIECGKSIGLHTVLVGTSR 192 (238)
Q Consensus 168 vg-D~~~di~~a~~~G~~~i~v~~~~ 192 (238)
|+ -|+.-...|...|+++|.+...+
T Consensus 88 is~~s~~a~~va~~lgiP~I~f~D~e 113 (335)
T PF04007_consen 88 ISFGSPEAARVAFGLGIPSIVFNDTE 113 (335)
T ss_pred EecCcHHHHHHHHHhCCCeEEEecCc
Confidence 44 34444668888999999886654
No 341
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=21.51 E-value=2.4e+02 Score=22.06 Aligned_cols=45 Identities=18% Similarity=0.400 Sum_probs=31.1
Q ss_pred eEEEEeCCccc---hhHHHhcCCeEEEecCC-CCCccccccccChhHHH
Q 035566 164 QRLFFDDSTRN---IECGKSIGLHTVLVGTS-RRTKGADYALENIHNIR 208 (238)
Q Consensus 164 ~~v~vgD~~~d---i~~a~~~G~~~i~v~~~-~~~~~ad~v~~~~~el~ 208 (238)
++++|=|...| +.-|...|+++|++... ......|+.|+-.++=.
T Consensus 159 d~iii~d~~~~~~ai~Ea~kl~IPiIaivDTn~dp~~IdypIP~Ndds~ 207 (258)
T PRK05299 159 DALFVVDPNKEHIAVKEARKLGIPVVAIVDTNCDPDGVDYPIPGNDDAI 207 (258)
T ss_pred CEEEEeCCCccHHHHHHHHHhCCCEEEEeeCCCCCcccceeeecCCchH
Confidence 46666666666 67778889999987443 34556788888777633
No 342
>PRK02264 N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase; Provisional
Probab=21.32 E-value=2.4e+02 Score=22.75 Aligned_cols=48 Identities=13% Similarity=-0.020 Sum_probs=27.4
Q ss_pred HHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEE
Q 035566 117 AKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFF 168 (238)
Q Consensus 117 ~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~v 168 (238)
+...+.++..+.++.-+..=+....+ +...+.+++++.|++|+++..+
T Consensus 119 e~l~~~l~Y~D~~~~avl~lE~~~lP----~~~v~e~vA~~cgv~p~~v~~l 166 (317)
T PRK02264 119 EELYEELGYRDDADFAVLVLESDKLP----PEEVAEKVAEECGVDPENVYLL 166 (317)
T ss_pred hHHHHHhCCccccCeEEEEEecCCCC----CHHHHHHHHHHcCCCHHHEEEE
Confidence 35556667766666543332233332 2555555678888888776543
No 343
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=21.14 E-value=2.7e+02 Score=19.12 Aligned_cols=41 Identities=12% Similarity=0.158 Sum_probs=23.2
Q ss_pred hHHHHHHHHhcCCCCC-eEEEEeCCc-cchh------HHHhcCCeEEEe
Q 035566 148 ELQLISMLRMVAHHFF-QRLFFDDST-RNIE------CGKSIGLHTVLV 188 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~-~~v~vgD~~-~di~------~a~~~G~~~i~v 188 (238)
...+.+.+..+|++++ .+|+++++. .... +++.+|...+.+
T Consensus 80 ~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~i 128 (138)
T cd01445 80 EAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAI 128 (138)
T ss_pred HHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEE
Confidence 4456667888898764 556666531 1222 344567665544
No 344
>PRK14572 D-alanyl-alanine synthetase A; Provisional
Probab=21.01 E-value=4.6e+02 Score=21.34 Aligned_cols=96 Identities=11% Similarity=0.159 Sum_probs=53.2
Q ss_pred HHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEEeC-----Cccc-hhHHHhcCCeEEE
Q 035566 114 IHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFFDD-----STRN-IECGKSIGLHTVL 187 (238)
Q Consensus 114 ~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~vgD-----~~~d-i~~a~~~G~~~i~ 187 (238)
..++..++.+|+.-.-....++. ... .+....++++..|++.-..+.+-. ...+ +......|.+.+.
T Consensus 104 g~iq~~le~~gipy~Gs~~~a~~---i~~----DK~~~k~~l~~~GI~~p~~~~~~~~~~~~~~~~~~~~~~~l~~PvvV 176 (347)
T PRK14572 104 GRIQGFLDTLGIPYTGSGVLASA---LAM----DKTRANQIFLQSGQKVAPFFELEKLKYLNSPRKTLLKLESLGFPQFL 176 (347)
T ss_pred cHHHHHHHHcCcCcCCCCHHHHH---HHh----CHHHHHHHHHHcCCCCCCEEEEEccccccChHHHHHHHHhcCCCEEE
Confidence 46778888888652111111111 111 245566678899986555554422 1122 3345567887665
Q ss_pred ecCCCCCccccccccChhHHHHHhHHhhh
Q 035566 188 VGTSRRTKGADYALENIHNIREAFPELWD 216 (238)
Q Consensus 188 v~~~~~~~~ad~v~~~~~el~~~l~~~~~ 216 (238)
=.........-.++.+.+||...+..++.
T Consensus 177 KP~~ggsS~GV~~v~~~~el~~a~~~~~~ 205 (347)
T PRK14572 177 KPVEGGSSVSTYKITNAEQLMTLLALIFE 205 (347)
T ss_pred ecCCCCCCCCEEEECCHHHHHHHHHHHHh
Confidence 44333222333577899999988887764
No 345
>PTZ00135 60S acidic ribosomal protein P0; Provisional
Probab=20.64 E-value=2.7e+02 Score=22.46 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=25.2
Q ss_pred hhHHHHHhcCCCC-eEEEecCChHHHHHHHHhcCcc
Q 035566 92 PVLRNLLLSLPIR-KVIFSNADEIHVAKVLRKLGLE 126 (238)
Q Consensus 92 ~~~~~~l~~l~~~-~~i~t~~~~~~~~~~l~~~~~~ 126 (238)
|+...+...++.. ++++|+.+...+..++..+...
T Consensus 73 ~~l~~L~~~LkG~~gliFTn~dp~ev~k~l~~~k~~ 108 (310)
T PTZ00135 73 PELEKLLPHVKGNVGFVFTKDDLFEVKPVILENKVP 108 (310)
T ss_pred cChHHHHhhccCCEEEEEECCCHHHHHHHHHHcCCc
Confidence 4566777778776 5678888888888887766443
No 346
>PF12812 PDZ_1: PDZ-like domain
Probab=20.58 E-value=2.2e+02 Score=17.48 Aligned_cols=54 Identities=9% Similarity=0.084 Sum_probs=29.0
Q ss_pred HHHHHhcCCCCCeEEEEeCCccchhHHH--hcCCeEEEecCCCCCccccccccChhHHHHHhHHh
Q 035566 152 ISMLRMVAHHFFQRLFFDDSTRNIECGK--SIGLHTVLVGTSRRTKGADYALENIHNIREAFPEL 214 (238)
Q Consensus 152 ~~~~~~~~~~~~~~v~vgD~~~di~~a~--~~G~~~i~v~~~~~~~~ad~v~~~~~el~~~l~~~ 214 (238)
++.++.++++.. .+++..+---..-+- ..|+-.-.|+.- -+++++++.+++..+
T Consensus 20 ~q~aR~~~~~~~-gv~v~~~~g~~~~~~~i~~g~iI~~Vn~k--------pt~~Ld~f~~vvk~i 75 (78)
T PF12812_consen 20 YQQARQYGIPVG-GVYVAVSGGSLAFAGGISKGFIITSVNGK--------PTPDLDDFIKVVKKI 75 (78)
T ss_pred HHHHHHhCCCCC-EEEEEecCCChhhhCCCCCCeEEEeECCc--------CCcCHHHHHHHHHhC
Confidence 455677777655 666665422222221 233322233333 378888888877654
No 347
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=20.57 E-value=1.2e+02 Score=24.69 Aligned_cols=83 Identities=10% Similarity=0.134 Sum_probs=42.3
Q ss_pred eEEEecCC--hHHHHHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcC-CCCCeEEEEeCCccchh---HH
Q 035566 105 KVIFSNAD--EIHVAKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVA-HHFFQRLFFDDSTRNIE---CG 178 (238)
Q Consensus 105 ~~i~t~~~--~~~~~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~~v~vgD~~~di~---~a 178 (238)
.++.|+.. ...-..+.+.+++ ...+..+..+.....+. -...+..+.+.+. ..|+=+++.||+..-+. +|
T Consensus 12 ~li~tG~H~~~~~g~~~~~~f~i-~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA 87 (346)
T PF02350_consen 12 ILIVTGQHLDPEMGDTFFEGFGI-PKPDYLLDSDSQSMAKS---TGLAIIELADVLEREKPDAVLVLGDRNEALAAALAA 87 (346)
T ss_dssp EEEEECSS--CHHHHHHHHHTT---SEEEE--STTS-HHHH---HHHHHHHHHHHHHHHT-SEEEEETTSHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHhhCCC-CCCCcccccccchHHHH---HHHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHHH
Confidence 35777765 5666667777776 45555555333111110 0111111112222 38889999999987655 55
Q ss_pred HhcCCeEEEecCC
Q 035566 179 KSIGLHTVLVGTS 191 (238)
Q Consensus 179 ~~~G~~~i~v~~~ 191 (238)
...+++.+.+-.|
T Consensus 88 ~~~~ipv~HieaG 100 (346)
T PF02350_consen 88 FYLNIPVAHIEAG 100 (346)
T ss_dssp HHTT-EEEEES--
T ss_pred HHhCCCEEEecCC
Confidence 5679999999777
No 348
>TIGR00200 cinA_nterm competence/damage-inducible protein CinA N-terminal domain. cinA is a DNA damage- or competence-inducible protein that is polycistronic with recA in a number of species
Probab=20.53 E-value=4e+02 Score=22.58 Aligned_cols=32 Identities=13% Similarity=0.078 Sum_probs=25.3
Q ss_pred chHHHHHHHHhcCCCCCeEEEEeCCccchhHH
Q 035566 147 QELQLISMLRMVAHHFFQRLFFDDSTRNIECG 178 (238)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~v~vgD~~~di~~a 178 (238)
+...+-..++.+|++......++|...+|..+
T Consensus 21 N~~~l~~~L~~~G~~v~~~~~v~Dd~~~i~~~ 52 (413)
T TIGR00200 21 NAQWLADFLAHQGLPLSRRTTVGDNPERLKTI 52 (413)
T ss_pred hHHHHHHHHHHCCCeEEEEEEeCCCHHHHHHH
Confidence 35556666899999998999999999986555
No 349
>TIGR00877 purD phosphoribosylamine--glycine ligase. This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.
Probab=20.41 E-value=4.1e+02 Score=22.25 Aligned_cols=69 Identities=9% Similarity=0.038 Sum_probs=44.1
Q ss_pred hHHHHHHHHhcCCCCCeEEEEeCCccc-hhHHHhcCCe-EEEecCCCCCccccccccChhHHHHHhHHhhhc
Q 035566 148 ELQLISMLRMVAHHFFQRLFFDDSTRN-IECGKSIGLH-TVLVGTSRRTKGADYALENIHNIREAFPELWDA 217 (238)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~vgD~~~d-i~~a~~~G~~-~i~v~~~~~~~~ad~v~~~~~el~~~l~~~~~~ 217 (238)
+...+++++++|++.-....+.+ ..+ ...+...|.+ .+.=.....-..--.++.+.+|+.+.+.+++..
T Consensus 105 K~~~k~~l~~~gIp~p~~~~~~~-~~~~~~~~~~~g~P~~VvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~ 175 (423)
T TIGR00877 105 KAFAKDFMKRYGIPTAEYEVFTD-PEEALSYIQEKGAPAIVVKADGLAAGKGVIVAKTNEEAIKAVEEILEQ 175 (423)
T ss_pred HHHHHHHHHHCCCCCCCeEEECC-HHHHHHHHHhcCCCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHH
Confidence 55566678999997766666655 444 5667778887 443332221122345678889998888777654
No 350
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=20.33 E-value=1.7e+02 Score=23.48 Aligned_cols=37 Identities=27% Similarity=0.331 Sum_probs=26.9
Q ss_pred hhHHHHHhcCCCC---eEEEecCChHHHHHHHHhcCcccc
Q 035566 92 PVLRNLLLSLPIR---KVIFSNADEIHVAKVLRKLGLEDC 128 (238)
Q Consensus 92 ~~~~~~l~~l~~~---~~i~t~~~~~~~~~~l~~~~~~~~ 128 (238)
+.+.+.|++++.+ .+++|+.....+..+.+.+++..+
T Consensus 21 ~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 21 GAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 4456666666544 568888888888889999888754
No 351
>PF02289 MCH: Cyclohydrolase (MCH); InterPro: IPR003209 Methenyltetrahydromethanopterin cyclohydrolase catalyses the interconversion of methenyltetrahydromethanopterin and N(5)formyltetrahydromethanopterin, and is found in both archaea and bacteria. In methanogenic archaea, such as Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133), this enzyme is involved in the production of methane from carbon dioxide []. In the sulphate-reducer Archaeoglobus fulgidus, this enzyme is involved in the tetrahydromethanopterin-dependent oxidation of lactate []. In Gram-negative methylotrophic bacteria this enzyme is involved in the tetrahydromethanopterin-dependent oxidation of formaldehyde to formate [].; GO: 0018759 methenyltetrahydromethanopterin cyclohydrolase activity, 0006730 one-carbon metabolic process; PDB: 1QLM_A.
Probab=20.08 E-value=1.8e+02 Score=23.45 Aligned_cols=58 Identities=12% Similarity=-0.007 Sum_probs=28.6
Q ss_pred EEecCChHHH---HHHHHhcCcccccceeeecccCCCCCCCCCchHHHHHHHHhcCCCCCeEEEE
Q 035566 107 IFSNADEIHV---AKVLRKLGLEDCFDGIVNFESLNPTNKTTGQELQLISMLRMVAHHFFQRLFF 168 (238)
Q Consensus 107 i~t~~~~~~~---~~~l~~~~~~~~f~~i~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~v~v 168 (238)
+-|+.-+... +...+.+++.+.++.-+.+=+....+ +...+.+++++.|++|+++..+
T Consensus 105 mGSGPaRALa~kpe~lf~~l~Y~D~~d~aVl~lEs~~lP----~~~v~~~IA~~cgv~p~~l~ll 165 (313)
T PF02289_consen 105 MGSGPARALARKPEELFEELGYRDDADFAVLVLESDKLP----PEEVAEKIAEACGVDPENLYLL 165 (313)
T ss_dssp EEESTTHHHHTSSHHHHHHHT-----S-EEEEEE-SS-------HHHHHHHHHHHTS-GGGEEEE
T ss_pred ecCcHHHHhhcCcHHHHHHcCccccCCcEEEEEEcCCCC----CHHHHHHHHHHcCCCHHHEEEE
Confidence 4554433332 45677888888777644433333332 2555666789999999887664
No 352
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=20.03 E-value=1.3e+02 Score=22.87 Aligned_cols=30 Identities=23% Similarity=0.166 Sum_probs=22.0
Q ss_pred CCeEEEEeCCc----cchhHHHhcCCeEEEecCC
Q 035566 162 FFQRLFFDDST----RNIECGKSIGLHTVLVGTS 191 (238)
Q Consensus 162 ~~~~v~vgD~~----~di~~a~~~G~~~i~v~~~ 191 (238)
.++++||||.. ||.+.....+..++.|..+
T Consensus 175 ~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~p 208 (220)
T PF03332_consen 175 FDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTSP 208 (220)
T ss_dssp -SEEEEEESS-STTSTTHHHHHSTTSEEEE-SSH
T ss_pred cceEEEEehhccCCCCCceeeecCCccEEEeCCH
Confidence 58999999986 8888888888766666543
Done!